BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045493
(1048 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 213/721 (29%), Positives = 301/721 (41%), Gaps = 114/721 (15%)
Query: 29 LDLSVNQLFG--TIPTQISHLSKLKHLDFSTN--QFSGIIPPQIGILTNLVVLRLSVNQL 84
LDLS N L G T T + S LK L+ S+N F G + + L +L VL LS N +
Sbjct: 105 LDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLK-LNSLEVLDLSANSI 163
Query: 85 NG------LIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPP 138
+G ++ + GEL LA+S N+++G +
Sbjct: 164 SGANVVGWVLSDGCGEL---KHLAISGNKISGDVDVSRCVNLEFLD-------------- 206
Query: 139 NWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGS 198
+ S ++ + LG+ + + + N SG R++ L + +++N+ VG
Sbjct: 207 ----VSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 262
Query: 199 IPSEIGNLRSLSYLGLNKNQLSGSIPP-TAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSL 257
IP L+SL YL L +N+ +G IP +G L L L N G +PP GS L
Sbjct: 263 IPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 320
Query: 258 LYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNI--NKLSGSIPKEIGNLK-SLSHLWLSKT 314
L LS N +G LP L ++ L V ++ N+ SG +P+ + NL SL L LS
Sbjct: 321 ESLALSSNNFSGELP--MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 378
Query: 315 QLSGFIPPSLGN--LSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCL 372
SG I P+L + ++ LY++ N G IP L L L LS N L+G+IP L
Sbjct: 379 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Query: 373 GNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVR 432
G+LS L+ L N L G IPQE+ +K L +L N TG
Sbjct: 439 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG------------------ 480
Query: 433 NNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNW 492
IP L NCT+L + L N+LTG I + G +L +L LSNN+F
Sbjct: 481 ------EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF-------- 526
Query: 493 IKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPXXXXXXXXXXXXXXX 552
SG IP+E+G+ L LD ++N G IP
Sbjct: 527 ----------------SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 570
Query: 553 XXXXXGDIPXXXXXXXXXXX---------XXXSANRLSKLIPKNLGELRKLHH------- 596
I NRLS P N+ H
Sbjct: 571 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630
Query: 597 ------LNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQN 650
L++S N S I +IG + L L+L HN + G+IP E+ +L L ++L N
Sbjct: 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690
Query: 651 KLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQNATIEAFQGNKELCGDVTGLPPC 710
KL G IP + L+ ID+S N L G IP F+ F N LCG LP C
Sbjct: 691 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG--YPLPRC 748
Query: 711 E 711
+
Sbjct: 749 D 749
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 245/523 (46%), Gaps = 32/523 (6%)
Query: 28 YLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGL 87
+LD+S N+L G IS ++LK L+ S+NQF G IPP L +L L L+ N+ G
Sbjct: 227 HLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGE 284
Query: 88 IPEEL-GELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPN------- 139
IP+ L G +L L LS N G++P +P +
Sbjct: 285 IPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 344
Query: 140 ---WGYLISPHYGSIPQDLGNLE-SPVSVSLHTNNFSG-VIPRSLGGLKN-LTFVYLNNN 193
+ G +P+ L NL S +++ L +NNFSG ++P KN L +YL NN
Sbjct: 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 404
Query: 194 RIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGS 253
G IP + N L L L+ N LSG+IP + G+LS L+ L L N L G IP +L
Sbjct: 405 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 464
Query: 254 FKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSK 313
K+L L L N L G +PS N ++L + + N N+L+G IPK IG L++L+ L LS
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN-NRLTGEIPKWIGRLENLAILKLSN 523
Query: 314 TQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEEL----GRLKS--LSQLSLSVNKLNGS 367
SG IP LG+ ++ L + N+ G+IP + G++ + ++ K +G
Sbjct: 524 NSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGM 583
Query: 368 IPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLT 427
C G + L+F +R +++ + N + + G+ +GS+
Sbjct: 584 KKECHGAGNLLEFQGIRS--------EQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMM 635
Query: 428 HFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGE 487
+ N G IP+ + + L+ L L N ++G+I + G L +LDLS+N G
Sbjct: 636 FLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 695
Query: 488 ISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSN 530
I L +++ N +SG IP E+G F +N
Sbjct: 696 IPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFETFPPAKFLNN 737
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 156/516 (30%), Positives = 240/516 (46%), Gaps = 67/516 (12%)
Query: 162 VSVSLHTNNFSGVIPR--SLGGLKNLTFVYLNNNRIVGSIPSEIG---NLRSLSYLGLNK 216
S+ L N+ SG + SLG L F+ +++N + P ++ L SL L L+
Sbjct: 103 TSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDLSA 160
Query: 217 NQLSGSIPP---TAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPS 273
N +SG+ + LK L + N++SG + + +L +L +S N + +P
Sbjct: 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF 218
Query: 274 SFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGL 333
G+ S+L+HL + NKLSG + I L L +S Q G IPP L +++ L
Sbjct: 219 -LGDCSALQHLDISG-NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYL 274
Query: 334 YIRENMLYGSIPEEL-GRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSI 392
+ EN G IP+ L G +L+ L LS N G++P G+ S L+ AL N SG +
Sbjct: 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 334
Query: 393 PQE-IENMKKLNKYLLFENQFTGYLPQNVCQ-SGSLTHFSVRNNNFVGPI-PRSLQNCTS 449
P + + M+ L L N+F+G LP+++ S SL + +NNF GPI P QN
Sbjct: 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN--- 391
Query: 450 LYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEIS 509
+N L + L L NN F G+I C +L +L++ N +S
Sbjct: 392 ------PKNTL--------------QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLS 431
Query: 510 GTIPSEIGNMTQLHKLDFSSNRLVGQIPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXX 569
GTIPS +G++++L L N L G+IP
Sbjct: 432 GTIPSSLGSLSKLRDLKLWLNML------------------------EGEIPQELMYVKT 467
Query: 570 XXXXXXSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLG 629
N L+ IP L L+ ++LSNN+ + EI IG+L L+ L LS+NS
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 630 GNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHG 665
GNIP+E+ + SL +++L N +G IP+ + G
Sbjct: 528 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG 563
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 196/440 (44%), Gaps = 23/440 (5%)
Query: 256 SLLYLYLSHNQLNGSLPS--SFGNLSSLKHLHVH-NINKLSGSIPKEIGNLKSLSHLWLS 312
SL L LS N L+G + + S G+ S LK L+V N G + + L SL L LS
Sbjct: 101 SLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLS 159
Query: 313 KTQLSG------FIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNG 366
+SG + G L + L I N + G + ++ R +L L +S N +
Sbjct: 160 ANSISGANVVGWVLSDGCGEL---KHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFST 214
Query: 367 SIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSL 426
IP LG+ S L+ + N+LSG + I +L + NQF G +P +S L
Sbjct: 215 GIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKS--L 271
Query: 427 THFSVRNNNFVGPIPRSLQN-CTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFF 485
+ S+ N F G IP L C +L L L N G + FG LE L LS+NNF
Sbjct: 272 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS 331
Query: 486 GEISSN-WIKCPQLATLNMGGNEISGTIPSEIGNMT-QLHKLDFSSNRLVGQI--PXXXX 541
GE+ + +K L L++ NE SG +P + N++ L LD SSN G I
Sbjct: 332 GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 391
Query: 542 XXXXXXXXXXXXXXXXGDIPXXXXXXXXXXXXXXSANRLSKLIPKNLGELRKLHHLNLSN 601
G IP S N LS IP +LG L KL L L
Sbjct: 392 PKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 451
Query: 602 NQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFR 661
N EI ++ + L L L N L G IPS + N +L +++L N+L+G IP
Sbjct: 452 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Query: 662 RMHGLSSIDVSYNELQGSIP 681
R+ L+ + +S N G+IP
Sbjct: 512 RLENLAILKLSNNSFSGNIP 531
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 181/426 (42%), Gaps = 51/426 (11%)
Query: 305 SLSHLWLSKTQLSGFIPP--SLGNLSNIRGLYIRENMLYGSIPEELG---RLKSLSQLSL 359
SL+ L LS+ LSG + SLG+ S ++ L + N L P ++ +L SL L L
Sbjct: 101 SLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDL 158
Query: 360 SVNKLNGS--IPHCLGN-LSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYL 416
S N ++G+ + L + LK A+ N++SG +
Sbjct: 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDV------------------------ 194
Query: 417 PQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLEL 476
+V + +L V +NNF IP L +C++L L + N+L+G+ S +L+L
Sbjct: 195 --DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKL 251
Query: 477 LDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEI-GNMTQLHKLDFSSNRLVGQ 535
L++S+N F G I +K L L++ N+ +G IP + G L LD S N G
Sbjct: 252 LNISSNQFVGPIPPLPLK--SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309
Query: 536 IPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXX-XXXXXXSANRLSKLIPKNLGELRK- 593
+P G++P S N S +P++L L
Sbjct: 310 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS 369
Query: 594 LHHLNLSNNQFSQEISIQIGKLVQ-----LSKLDLSHNSLGGNIPSEICNLESLEYMNLL 648
L L+LS+N FS I + L Q L +L L +N G IP + N L ++L
Sbjct: 370 LLTLDLSSNNFSGPI---LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426
Query: 649 QNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQNATIEAFQGNKELCGDV-TGL 707
N LSG IPS + L + + N L+G IP + +L G++ +GL
Sbjct: 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
Query: 708 PPCEAL 713
C L
Sbjct: 487 SNCTNL 492
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQI-----GILTNLVVLRLSV 81
A L LS N G IP ++ L LD +TN F+G IP + I N + + V
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 576
Query: 82 NQLNGLIPEELGELTSLNEL----ALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIP 137
N + +E +L E + NRL+ P
Sbjct: 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV----------------- 619
Query: 138 PNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVG 197
+G SP + N S + + + N SG IP+ +G + L + L +N I G
Sbjct: 620 --YGGHTSPTF-------DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670
Query: 198 SIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSL 257
SIP E+G+LR L+ L L+ N+L G IP L+ L + L +N LSG I P++G F++
Sbjct: 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI-PEMGQFETF 729
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 213/721 (29%), Positives = 301/721 (41%), Gaps = 114/721 (15%)
Query: 29 LDLSVNQLFG--TIPTQISHLSKLKHLDFSTN--QFSGIIPPQIGILTNLVVLRLSVNQL 84
LDLS N L G T T + S LK L+ S+N F G + + L +L VL LS N +
Sbjct: 102 LDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLK-LNSLEVLDLSANSI 160
Query: 85 NG------LIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPP 138
+G ++ + GEL LA+S N+++G +
Sbjct: 161 SGANVVGWVLSDGCGELK---HLAISGNKISGDVDVSRCVNLEFLD-------------- 203
Query: 139 NWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGS 198
+ S ++ + LG+ + + + N SG R++ L + +++N+ VG
Sbjct: 204 ----VSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 259
Query: 199 IPSEIGNLRSLSYLGLNKNQLSGSIPP-TAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSL 257
IP L+SL YL L +N+ +G IP +G L L L N G +PP GS L
Sbjct: 260 IPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 317
Query: 258 LYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNI--NKLSGSIPKEIGNL-KSLSHLWLSKT 314
L LS N +G LP L ++ L V ++ N+ SG +P+ + NL SL L LS
Sbjct: 318 ESLALSSNNFSGELP--MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 375
Query: 315 QLSGFIPPSLGN--LSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCL 372
SG I P+L + ++ LY++ N G IP L L L LS N L+G+IP L
Sbjct: 376 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Query: 373 GNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVR 432
G+LS L+ L N L G IPQE+ +K L +L N TG
Sbjct: 436 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG------------------ 477
Query: 433 NNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNW 492
IP L NCT+L + L N+LTG I + G +L +L LSNN+F
Sbjct: 478 ------EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF-------- 523
Query: 493 IKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPXXXXXXXXXXXXXXX 552
SG IP+E+G+ L LD ++N G IP
Sbjct: 524 ----------------SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 567
Query: 553 XXXXXGDIPXXXXXXXXXXX---------XXXSANRLSKLIPKNLGELRKLHH------- 596
I NRLS P N+ H
Sbjct: 568 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 627
Query: 597 ------LNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQN 650
L++S N S I +IG + L L+L HN + G+IP E+ +L L ++L N
Sbjct: 628 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 687
Query: 651 KLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQNATIEAFQGNKELCGDVTGLPPC 710
KL G IP + L+ ID+S N L G IP F+ F N LCG LP C
Sbjct: 688 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG--YPLPRC 745
Query: 711 E 711
+
Sbjct: 746 D 746
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 245/523 (46%), Gaps = 32/523 (6%)
Query: 28 YLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGL 87
+LD+S N+L G IS ++LK L+ S+NQF G IPP L +L L L+ N+ G
Sbjct: 224 HLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGE 281
Query: 88 IPEEL-GELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPN------- 139
IP+ L G +L L LS N G++P +P +
Sbjct: 282 IPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 341
Query: 140 ---WGYLISPHYGSIPQDLGNLE-SPVSVSLHTNNFSG-VIPRSLGGLKN-LTFVYLNNN 193
+ G +P+ L NL S +++ L +NNFSG ++P KN L +YL NN
Sbjct: 342 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 401
Query: 194 RIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGS 253
G IP + N L L L+ N LSG+IP + G+LS L+ L L N L G IP +L
Sbjct: 402 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 461
Query: 254 FKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSK 313
K+L L L N L G +PS N ++L + + N N+L+G IPK IG L++L+ L LS
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN-NRLTGEIPKWIGRLENLAILKLSN 520
Query: 314 TQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEEL----GRLKS--LSQLSLSVNKLNGS 367
SG IP LG+ ++ L + N+ G+IP + G++ + ++ K +G
Sbjct: 521 NSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGM 580
Query: 368 IPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLT 427
C G + L+F +R +++ + N + + G+ +GS+
Sbjct: 581 KKECHGAGNLLEFQGIRS--------EQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMM 632
Query: 428 HFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGE 487
+ N G IP+ + + L+ L L N ++G+I + G L +LDLS+N G
Sbjct: 633 FLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 692
Query: 488 ISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSN 530
I L +++ N +SG IP E+G F +N
Sbjct: 693 IPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFETFPPAKFLNN 734
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 156/516 (30%), Positives = 240/516 (46%), Gaps = 67/516 (12%)
Query: 162 VSVSLHTNNFSGVIPR--SLGGLKNLTFVYLNNNRIVGSIPSEIG---NLRSLSYLGLNK 216
S+ L N+ SG + SLG L F+ +++N + P ++ L SL L L+
Sbjct: 100 TSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDLSA 157
Query: 217 NQLSGSIPP---TAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPS 273
N +SG+ + LK L + N++SG + + +L +L +S N + +P
Sbjct: 158 NSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF 215
Query: 274 SFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGL 333
G+ S+L+HL + NKLSG + I L L +S Q G IPP L +++ L
Sbjct: 216 -LGDCSALQHLDISG-NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYL 271
Query: 334 YIRENMLYGSIPEEL-GRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSI 392
+ EN G IP+ L G +L+ L LS N G++P G+ S L+ AL N SG +
Sbjct: 272 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 331
Query: 393 PQE-IENMKKLNKYLLFENQFTGYLPQNVCQ-SGSLTHFSVRNNNFVGPI-PRSLQNCTS 449
P + + M+ L L N+F+G LP+++ S SL + +NNF GPI P QN
Sbjct: 332 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN--- 388
Query: 450 LYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEIS 509
+N L + L L NN F G+I C +L +L++ N +S
Sbjct: 389 ------PKNTL--------------QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLS 428
Query: 510 GTIPSEIGNMTQLHKLDFSSNRLVGQIPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXX 569
GTIPS +G++++L L N L G+IP
Sbjct: 429 GTIPSSLGSLSKLRDLKLWLNML------------------------EGEIPQELMYVKT 464
Query: 570 XXXXXXSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLG 629
N L+ IP L L+ ++LSNN+ + EI IG+L L+ L LS+NS
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 630 GNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHG 665
GNIP+E+ + SL +++L N +G IP+ + G
Sbjct: 525 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG 560
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 196/440 (44%), Gaps = 23/440 (5%)
Query: 256 SLLYLYLSHNQLNGSLPS--SFGNLSSLKHLHVH-NINKLSGSIPKEIGNLKSLSHLWLS 312
SL L LS N L+G + + S G+ S LK L+V N G + + L SL L LS
Sbjct: 98 SLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLS 156
Query: 313 KTQLSG------FIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNG 366
+SG + G L + L I N + G + ++ R +L L +S N +
Sbjct: 157 ANSISGANVVGWVLSDGCGEL---KHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFST 211
Query: 367 SIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSL 426
IP LG+ S L+ + N+LSG + I +L + NQF G +P +S L
Sbjct: 212 GIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKS--L 268
Query: 427 THFSVRNNNFVGPIPRSLQN-CTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFF 485
+ S+ N F G IP L C +L L L N G + FG LE L LS+NNF
Sbjct: 269 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS 328
Query: 486 GEISSN-WIKCPQLATLNMGGNEISGTIPSEIGNMT-QLHKLDFSSNRLVGQI--PXXXX 541
GE+ + +K L L++ NE SG +P + N++ L LD SSN G I
Sbjct: 329 GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 388
Query: 542 XXXXXXXXXXXXXXXXGDIPXXXXXXXXXXXXXXSANRLSKLIPKNLGELRKLHHLNLSN 601
G IP S N LS IP +LG L KL L L
Sbjct: 389 PKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 448
Query: 602 NQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFR 661
N EI ++ + L L L N L G IPS + N +L +++L N+L+G IP
Sbjct: 449 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 508
Query: 662 RMHGLSSIDVSYNELQGSIP 681
R+ L+ + +S N G+IP
Sbjct: 509 RLENLAILKLSNNSFSGNIP 528
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 181/426 (42%), Gaps = 51/426 (11%)
Query: 305 SLSHLWLSKTQLSGFIPP--SLGNLSNIRGLYIRENMLYGSIPEELG---RLKSLSQLSL 359
SL+ L LS+ LSG + SLG+ S ++ L + N L P ++ +L SL L L
Sbjct: 98 SLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDL 155
Query: 360 SVNKLNGS--IPHCLGN-LSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYL 416
S N ++G+ + L + LK A+ N++SG +
Sbjct: 156 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDV------------------------ 191
Query: 417 PQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLEL 476
+V + +L V +NNF IP L +C++L L + N+L+G+ S +L+L
Sbjct: 192 --DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKL 248
Query: 477 LDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEI-GNMTQLHKLDFSSNRLVGQ 535
L++S+N F G I +K L L++ N+ +G IP + G L LD S N G
Sbjct: 249 LNISSNQFVGPIPPLPLK--SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 306
Query: 536 IPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXX-XXXXXXSANRLSKLIPKNLGELRK- 593
+P G++P S N S +P++L L
Sbjct: 307 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS 366
Query: 594 LHHLNLSNNQFSQEISIQIGKLVQ-----LSKLDLSHNSLGGNIPSEICNLESLEYMNLL 648
L L+LS+N FS I + L Q L +L L +N G IP + N L ++L
Sbjct: 367 LLTLDLSSNNFSGPI---LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 423
Query: 649 QNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQNATIEAFQGNKELCGDV-TGL 707
N LSG IPS + L + + N L+G IP + +L G++ +GL
Sbjct: 424 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 483
Query: 708 PPCEAL 713
C L
Sbjct: 484 SNCTNL 489
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQI-----GILTNLVVLRLSV 81
A L LS N G IP ++ L LD +TN F+G IP + I N + + V
Sbjct: 514 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 573
Query: 82 NQLNGLIPEELGELTSLNEL----ALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIP 137
N + +E +L E + NRL+ P
Sbjct: 574 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV----------------- 616
Query: 138 PNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVG 197
+G SP + N S + + + N SG IP+ +G + L + L +N I G
Sbjct: 617 --YGGHTSPTF-------DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 667
Query: 198 SIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSL 257
SIP E+G+LR L+ L L+ N+L G IP L+ L + L +N LSG I P++G F++
Sbjct: 668 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI-PEMGQFETF 726
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 151 bits (382), Expect = 1e-36, Method: Composition-based stats.
Identities = 97/286 (33%), Positives = 145/286 (50%), Gaps = 17/286 (5%)
Query: 772 LSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHS--LPTGEIGINQKGFVSEITE 829
+++ F K +L G GG G VYK L G AVK+L GE+ + V I+
Sbjct: 35 VASDNFSNKNIL-GRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE--VEMISM 91
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEA-TAAELDWSKRVNVIKGVANA 888
HRN+++ GFC LVY Y+ GS+A+ L + LDW KR + G A
Sbjct: 92 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARG 151
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK-PDSSNWSELAGTCGYIA 947
L+Y+H C P I+HRD+ + +LLD E++A V DFG AK + D + GT G+IA
Sbjct: 152 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIA 211
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRL 1007
PE T +++EK DVF +GV++LE+I G+ + V L+ +
Sbjct: 212 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW---VKGLLKEKK 268
Query: 1008 PPPLGEV-------EEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
L +V +E+++ +I VA LC ++P RP M +V +L
Sbjct: 269 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant
Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 150 bits (380), Expect = 3e-36, Method: Composition-based stats.
Identities = 97/286 (33%), Positives = 145/286 (50%), Gaps = 17/286 (5%)
Query: 772 LSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPT--GEIGINQKGFVSEITE 829
+++ F K +L G GG G VYK L G AVK+L T GE+ + V I+
Sbjct: 27 VASDNFXNKNIL-GRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE--VEMISM 83
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEA-TAAELDWSKRVNVIKGVANA 888
HRN+++ GFC LVY Y+ GS+A+ L + LDW KR + G A
Sbjct: 84 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARG 143
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK-PDSSNWSELAGTCGYIA 947
L+Y+H C P I+HRD+ + +LLD E++A V DFG AK + D + G G+IA
Sbjct: 144 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIA 203
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRL 1007
PE T +++EK DVF +GV++LE+I G+ + V L+ +
Sbjct: 204 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW---VKGLLKEKK 260
Query: 1008 PPPLGEV-------EEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
L +V +E+++ +I VA LC ++P RP M +V +L
Sbjct: 261 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 109 bits (273), Expect = 6e-24, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 7/197 (3%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYGF 841
G G GTV++AE D AVK L +N+ F+ E+ +RH NIV F G
Sbjct: 46 GAGSFGTVHRAEWHGSDV-AVKILMEQDFHAERVNE--FLREVAIMKRLRHPNIVLFMGA 102
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ +L +V EYL RGSL +L +LD +R+++ VA ++Y+H+ PPI+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIV 161
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRD+ S +L+D +Y V DFG ++ AGT ++APE+ +NEK D
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 962 VFNFGVLVLEVIEGKHP 978
V++FGV++ E+ + P
Sbjct: 222 VYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 108 bits (270), Expect = 2e-23, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 7/197 (3%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYGF 841
G G GTV++AE D AVK L +N+ F+ E+ +RH NIV F G
Sbjct: 46 GAGSFGTVHRAEWHGSDV-AVKILMEQDFHAERVNE--FLREVAIMKRLRHPNIVLFMGA 102
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ +L +V EYL RGSL +L +LD +R+++ VA ++Y+H+ PPI+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIV 161
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HR++ S +L+D +Y V DFG ++ + AGT ++APE+ +NEK D
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 962 VFNFGVLVLEVIEGKHP 978
V++FGV++ E+ + P
Sbjct: 222 VYSFGVILWELATLQQP 238
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 121/225 (53%), Gaps = 6/225 (2%)
Query: 169 NNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAG 228
NN G IP ++ L L ++Y+ + + G+IP + +++L L + N LSG++PP+
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 229 NLSNLKFLYLHDNRLSGYIPPKLGSFKSLLY-LYLSHNQLNGSLPSSFGNLSSLKHLHVH 287
+L NL + NR+SG IP GSF L + +S N+L G +P +F NL +L + +
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLS 205
Query: 288 NINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEE 347
N L G G+ K+ + L+K L+ F +G N+ GL +R N +YG++P+
Sbjct: 206 R-NMLEGDASVLFGSDKNTQKIHLAKNSLA-FDLGKVGLSKNLNGLDLRNNRIYGTLPQG 263
Query: 348 LGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENE-LSGS 391
L +LK L L++S N L G IP GNL A N+ L GS
Sbjct: 264 LTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 296 IPKEIGNLKSLSHLWLSK-TQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSL 354
IP + NL L+ L++ L G IPP++ L+ + LYI + G+IP+ L ++K+L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 355 SQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTG 414
L S N L+G++P + +L NL N +SG+IP + KL
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL------------ 175
Query: 415 YLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDL 474
T ++ N G IP + N +L + L RN L G+ S +FG +
Sbjct: 176 -----------FTSMTISRNRLTGKIPPTFAN-LNLAFVDLSRNMLEGDASVLFGSDKNT 223
Query: 475 ELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVG 534
+ + L+ N+ ++ + L L++ N I GT+P + + LH L+ S N L G
Sbjct: 224 QKIHLAKNSLAFDLGKVGLS-KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282
Query: 535 QIP 537
+IP
Sbjct: 283 EIP 285
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 136/336 (40%), Gaps = 46/336 (13%)
Query: 393 PQEIENMKKLNKYLLFENQFTGYLPQN----------VCQSGSLTHFSVRNNNFVG---- 438
PQ+ + + ++ K L + +LP +C + + T + V N + G
Sbjct: 5 PQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQT-YRVNNLDLSGLNLP 63
Query: 439 ---PIPRSLQNCTSLYSLRLER-NQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIK 494
PIP SL N L L + N L G I L L +++ N G I +
Sbjct: 64 KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ 123
Query: 495 CPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPXXXXXXXXXXXXXXXXX 554
L TL+ N +SGT+P I ++ L + F NR+ G IP
Sbjct: 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI-- 181
Query: 555 XXXGDIPXXXXXXXXXXXXXXSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGK 614
S NRL+ IP L L ++LS N + S+ G
Sbjct: 182 ---------------------SRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGS 219
Query: 615 LVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYN 674
K+ L+ NSL ++ ++ ++L ++L N++ G +P ++ L S++VS+N
Sbjct: 220 DKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278
Query: 675 ELQGSIPHSKAFQNATIEAFQGNKELCGDVTGLPPC 710
L G IP Q + A+ NK LCG + LP C
Sbjct: 279 NLCGEIPQGGNLQRFDVSAYANNKCLCG--SPLPAC 312
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 109/263 (41%), Gaps = 41/263 (15%)
Query: 33 VNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEEL 92
+N L G IP I+ L++L +L + SG IP + + LV L S N L+G +P +
Sbjct: 86 INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145
Query: 93 GELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLISPHYGSIP 152
L +L + NR++G+IP YGS
Sbjct: 146 SSLPNLVGITFDGNRISGAIPD--------------------------------SYGSFS 173
Query: 153 QDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYL 212
+ S+++ N +G IP + L NL FV L+ N + G G+ ++ +
Sbjct: 174 KLF------TSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 213 GLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLP 272
L KN L+ + G NL L L +NR+ G +P L K L L +S N L G +P
Sbjct: 227 HLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Query: 273 SSFGNLSSLKHLHVHNINKLSGS 295
GNL N L GS
Sbjct: 286 QG-GNLQRFDVSAYANNKCLCGS 307
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 19/216 (8%)
Query: 28 YLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGL 87
YL ++ + G IP +S + L LDFS N SG +PP I L NLV + N+++G
Sbjct: 105 YLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGA 164
Query: 88 IPEELGELTSL-NELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLISP 146
IP+ G + L + +S NRL G IP
Sbjct: 165 IPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLE-------------- 210
Query: 147 HYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNL 206
G G+ ++ + L N+ + + + +G KNL + L NNRI G++P + L
Sbjct: 211 --GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQL 267
Query: 207 RSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNR 242
+ L L ++ N L G I P GNL +N+
Sbjct: 268 KFLHSLNVSFNNLCGEI-PQGGNLQRFDVSAYANNK 302
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNG 86
A++DLS N L G + + + N + + ++G+ NL L L N++ G
Sbjct: 200 AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYG 258
Query: 87 LIPEELGELTSLNELALSYNRLNGSIP 113
+P+ L +L L+ L +S+N L G IP
Sbjct: 259 TLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 129/274 (47%), Gaps = 24/274 (8%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSL---PTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G GG G VYK + T AVKKL ++ T E+ + + + +H N+V+ GF
Sbjct: 40 GEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S L LVY Y+ GSL LS L W R + +G AN ++++H + +
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---I 155
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEK 959
HRDI S +LLD + A +SDFG A+ + + S + GT Y+APE A K
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPK 214
Query: 960 CDVFNFGVLVLEVIEG-------KHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLG 1012
D+++FGV++LE+I G + P + + D ID ++
Sbjct: 215 SDIYSFGVVLLEIITGLPAVDEHREP----QLLLDIKEEIEDEEKTIEDYIDKKMNDADS 270
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+++M +VA CL + RP ++KV LL
Sbjct: 271 ---TSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 128/274 (46%), Gaps = 24/274 (8%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSL---PTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G GG G VYK + T AVKKL ++ T E+ + + + +H N+V+ GF
Sbjct: 40 GEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S L LVY Y+ GSL LS L W R + +G AN ++++H + +
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---I 155
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLK--PDSSNWSELAGTCGYIAPELAYTMRANEK 959
HRDI S +LLD + A +SDFG A+ + + + GT Y+APE A K
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPK 214
Query: 960 CDVFNFGVLVLEVIEG-------KHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLG 1012
D+++FGV++LE+I G + P + + D ID ++
Sbjct: 215 SDIYSFGVVLLEIITGLPAVDEHREP----QLLLDIKEEIEDEEKTIEDYIDKKMNDADS 270
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+++M +VA CL + RP ++KV LL
Sbjct: 271 ---TSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 128/274 (46%), Gaps = 24/274 (8%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSL---PTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G GG G VYK + T AVKKL ++ T E+ + + + +H N+V+ GF
Sbjct: 34 GEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 92
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S L LVY Y+ GSL LS L W R + +G AN ++++H + +
Sbjct: 93 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---I 149
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEK 959
HRDI S +LLD + A +SDFG A+ + + + GT Y+APE A K
Sbjct: 150 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPK 208
Query: 960 CDVFNFGVLVLEVIEG-------KHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLG 1012
D+++FGV++LE+I G + P + + D ID ++
Sbjct: 209 SDIYSFGVVLLEIITGLPAVDEHREP----QLLLDIKEEIEDEEKTIEDYIDKKMNDADS 264
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+++M +VA CL + RP ++KV LL
Sbjct: 265 ---TSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGF 841
G GG G VYK + T AVKKL ++ ++ F EI + +H N+V+ GF
Sbjct: 31 GEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S L LVY Y GSL LS L W R + +G AN ++++H + +
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---I 146
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLK--PDSSNWSELAGTCGYIAPELAYTMRANEK 959
HRDI S +LLD + A +SDFG A+ + S + GT Y APE A K
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPK 205
Query: 960 CDVFNFGVLVLEVIEG 975
D+++FGV++LE+I G
Sbjct: 206 SDIYSFGVVLLEIITG 221
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 10/205 (4%)
Query: 773 SASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE-ITEIR 831
+ + F+ K ++ G G G VYK L G A+K+ P GI + E ++ R
Sbjct: 37 ATNNFDHKFLI-GHGVFGKVYKGVLRDGAKVALKR--RTPESSQGIEEFETEIETLSFCR 93
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLAT-ILSNEATAAELDWSKRVNVIKGVANALS 890
H ++V GFC + L+Y+Y+E G+L + ++ + W +R+ + G A L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKF-LKPDSSNWSELA-GTCGYIAP 948
Y+H I+HRD+ S +LLD + ++DFG +K + D ++ + GT GYI P
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 949 ELAYTMRANEKCDVFNFGVLVLEVI 973
E R EK DV++FGV++ EV+
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 14/207 (6%)
Query: 773 SASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE-ITEIR 831
+ + F+ K ++ G G G VYK L G A+K+ P GI + E ++ R
Sbjct: 37 ATNNFDHKFLI-GHGVFGKVYKGVLRDGAKVALKR--RTPESSQGIEEFETEIETLSFCR 93
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLAT-ILSNEATAAELDWSKRVNVIKGVANALS 890
H ++V GFC + L+Y+Y+E G+L + ++ + W +R+ + G A L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA----GTCGYI 946
Y+H I+HRD+ S +LLD + ++DFG +K K + L GT GYI
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYI 208
Query: 947 APELAYTMRANEKCDVFNFGVLVLEVI 973
PE R EK DV++FGV++ EV+
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 89.7 bits (221), Expect = 8e-18, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G GTVY A ++ +G A+++ L P E+ IN+ + + E ++ NIV +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLDS 85
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V EYL GSL ++ T +D + V + AL ++H + ++
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL ++ ++DFG + P+ S SE+ GT ++APE+ K D
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++ +E+IEG+ P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 49/269 (18%)
Query: 803 RAVKKLHSLPTGEIGI----------NQKGFVSEITEIR---HRNIVKFYGFCSHTQHLF 849
+A+K H TGE+ + Q+ F+ E+ +R H N++KF G + L
Sbjct: 25 QAIKVTHR-ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN 83
Query: 850 LVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKK 909
+ EY++ G+L I+ ++ ++ WS+RV+ K +A+ ++Y+H I+HRD++S
Sbjct: 84 FITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHN 138
Query: 910 VLLDLEYKAHVSDFGTAKFL--------------KPDSSNWSELAGTCGYIAPELAYTMR 955
L+ V+DFG A+ + KPD + G ++APE+
Sbjct: 139 CLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS 198
Query: 956 ANEKCDVFNFGVLVLEVIE--GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGE 1013
+EK DVF+FG+++ E+I P + + + V +D PP
Sbjct: 199 YDEKVDVFSFGIVLCEIIGRVNADPDYL--------PRTMDFGLNVRGFLDRYCPPNCP- 249
Query: 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
S + C D +P+ RP+ K+
Sbjct: 250 -----PSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G GTVY A ++ +G A+++ L P E+ IN+ + + E ++ NIV +
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLDS 86
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V EYL GSL ++ T +D + V + AL ++H + ++
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL ++ ++DFG + P+ S S + GT ++APE+ K D
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVD 199
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++ +E+IEG+ P
Sbjct: 200 IWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G GTVY A ++ +G A+++ L P E+ IN+ + + E ++ NIV +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLDS 85
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V EYL GSL ++ T +D + V + AL ++H + ++
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL ++ ++DFG + P+ S S + GT ++APE+ K D
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++ +E+IEG+ P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G GTVY A ++ +G A+++ L P E+ IN+ + + E ++ NIV +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLDS 85
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V EYL GSL ++ T +D + V + AL ++H + ++
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL ++ ++DFG + P+ S S + GT ++APE+ K D
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++ +E+IEG+ P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G GTVY A ++ +G A+++ L P E+ IN+ + + E ++ NIV +
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLDS 86
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V EYL GSL ++ T +D + V + AL ++H + ++
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HR+I S +LL ++ ++DFG + P+ S S + GT ++APE+ K D
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 199
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++ +E+IEG+ P
Sbjct: 200 IWSLGIMAIEMIEGEPP 216
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 77 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 130
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS +EL GT Y+ PE+ +EK D
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVD 188
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.8 bits (203), Expect = 9e-16, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 119/273 (43%), Gaps = 31/273 (11%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G GG G VY+A GD AVK P +I + E ++H NI+ G
Sbjct: 16 GIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
C +L LV E+ G L +LS + ++ VN +A ++Y+H + PI+
Sbjct: 75 CLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI----LVNWAVQIARGMNYLHDEAIVPII 130
Query: 902 HRDISSKKVLL-------DLEYKA-HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT 953
HRD+ S +L+ DL K ++DFG A+ + + AG ++APE+
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYAWMAPEVIRA 188
Query: 954 MRANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGE 1013
++ DV+++GVL+ E++ G+ P F MN + I S P P +
Sbjct: 189 SMFSKGSDVWSYGVLLWELLTGEVP--FRGIDGLAVAYGVAMNKLALP-IPSTCPEPFAK 245
Query: 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ E C + +P RP+ + + L
Sbjct: 246 LMED----------CWNPDPHSRPSFTNILDQL 268
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 43 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 103 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VI 156
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS +L GT Y+ PE+ +EK D
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 215 LWSLGVLCYEFLVGKPP 231
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 77 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 130
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS ++L GT Y+ PE+ +EK D
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY RG + L ++ D + I +ANALSY H ++
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQK---LSKFDEQRTATYITELANALSYCHSK---RVI 135
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 194 LWSLGVLCYEFLVGKPP 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 78 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 131
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS ++L GT Y+ PE+ +EK D
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 190 LWSLGVLCYEFLVGKPP 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 82 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 135
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS ++L GT Y+ PE+ +EK D
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 194 LWSLGVLCYEFLVGKPP 210
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
Length = 292
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLH-SLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
G+G GTVYK + GD AVK L+ + PT + K V + + RH NI+ F G+ +
Sbjct: 33 GSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
Q L +V ++ E SL L T E+ K +++ + A + Y+H I+HR
Sbjct: 91 KPQ-LAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 904 DISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS------ELAGTCGYIAPELAYTMRAN 957
D+ S + L + + DFG L + S WS +L+G+ ++APE+ +N
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFG----LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 958 E---KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEV 1014
+ DV+ FG+++ E++ G+ P N + ++ + L P L +V
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLP----------YSNINNRDQIIEMVGRGSLSPDLSKV 250
Query: 1015 EEKL-KSMIAVAFLCLDANPDCRPTMQKV 1042
K M + CL D RP+ ++
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRI 279
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 17 GKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ ++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 77 FHDSTRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---KVI 130
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 43 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 103 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VI 156
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 215 LWSLGVLCYEFLVGKPP 231
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 77 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 130
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS ++L GT Y+ PE+ +EK D
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 77 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 130
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 25/265 (9%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLH-SLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
G+G GTVYK + GD AVK L+ + PT + K V + + RH NI+ F G+ +
Sbjct: 21 GSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
Q L +V ++ E SL L T E+ K +++ + A + Y+H I+HR
Sbjct: 79 KPQ-LAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHR 132
Query: 904 DISSKKVLLDLEYKAHVSDFG--TAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE--- 958
D+ S + L + + DFG T K S + +L+G+ ++APE+ +N
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 959 KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL 1018
+ DV+ FG+++ E++ G+ P N + ++ + L P L +V
Sbjct: 193 QSDVYAFGIVLYELMTGQLP----------YSNINNRDQIIEMVGRGSLSPDLSKVRSNC 242
Query: 1019 -KSMIAVAFLCLDANPDCRPTMQKV 1042
K M + CL D RP+ ++
Sbjct: 243 PKRMKRLMAECLKKKRDERPSFPRI 267
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 80 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 191
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 80 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 34 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 93
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 94 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 147
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 205
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 206 LWSLGVLCYEFLVGKPP 222
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 82 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 135
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 194 LWSLGVLCYEFLVGKPP 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 77 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 130
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 80 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 80 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS +L GT Y+ PE+ +EK D
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
Length = 289
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLH-SLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
G+G GTVYK + GD AVK L+ + PT + K V + + RH NI+ F G+ +
Sbjct: 33 GSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
Q L +V ++ E SL L T E+ K +++ + A + Y+H I+HR
Sbjct: 91 APQ-LAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 904 DISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS------ELAGTCGYIAPELAYTMRAN 957
D+ S + L + + DFG L + S WS +L+G+ ++APE+ +N
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFG----LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 958 E---KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEV 1014
+ DV+ FG+++ E++ G+ P N + ++ + L P L +V
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLP----------YSNINNRDQIIEMVGRGSLSPDLSKV 250
Query: 1015 EEKL-KSMIAVAFLCLDANPDCRPTMQKV 1042
K M + CL D RP+ ++
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRI 279
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY RG + L ++ D + I +ANALSY H ++
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQK---LSKFDEQRTATYITELANALSYCHSK---RVI 135
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS L GT Y+ PE+ +EK D
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVD 193
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 194 LWSLGVLCYEFLVGKPP 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 77 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 130
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 16 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 75
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 76 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 129
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 130 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 187
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 188 LWSLGVLCYEFLVGKPP 204
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 21 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 81 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 134
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 135 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 193 LWSLGVLCYEFLVGKPP 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 78 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 131
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + SS + L+GT Y+ PE+ +EK D
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVD 189
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 190 LWSLGVLCYEFLVGKPP 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 78 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 131
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS L GT Y+ PE+ +EK D
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 190 LWSLGVLCYEFLVGKPP 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 19 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 79 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 132
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS L GT Y+ PE+ +EK D
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 191 LWSLGVLCYEFLVGKPP 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 5e-15, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 80 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS L GT Y+ PE+ +EK D
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 77 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 130
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS L GT Y+ PE+ +EK D
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.3 bits (194), Expect = 9e-15, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 828 TEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVAN 887
+ +RH NI++ YG+ ++L+ EY L T+ ++ D + I +AN
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELAN 116
Query: 888 ALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIA 947
ALSY H ++HRDI + +LL + ++DFG + + SS + L GT Y+
Sbjct: 117 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLP 171
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
PE+ +EK D+++ GVL E + GK P
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 80 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + +++FG + + SS + L GT Y+ PE+ +EK D
Sbjct: 134 HRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKAEL-TSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A + +SG AVKK L E+ N+ V + + +H N+V+ Y
Sbjct: 160 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE---VVIMRDYQHENVVEMYNS 216
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V E+LE G+L I+ T ++ + V V ALS +H ++
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 269
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL + + +SDFG + + L GT ++APEL + + D
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 329
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++V+E+++G+ P
Sbjct: 330 IWSLGIMVIEMVDGEPP 346
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 19 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 79 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 132
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + +++FG + + SS + L GT Y+ PE+ +EK D
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 191 LWSLGVLCYEFLVGKPP 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ ++ D + I +ANALSY H ++
Sbjct: 82 FHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVI 135
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE +EK D
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVD 193
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + GK P
Sbjct: 194 LWSLGVLCYEFLVGKPP 210
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 21 GKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ + D + I +ANALSY H ++
Sbjct: 81 FHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK---RVI 134
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS + L GT Y+ PE+ +EK D
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + G P
Sbjct: 193 LWSLGVLCYEFLVGMPP 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 30/297 (10%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLH-SLPTGEIGINQ 820
G + ++ E+ G+ + G+G GTVYK + GD AVK L+ + PT +
Sbjct: 1 GSDSSDDWEIPDGQITVGQRI--GSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAF 56
Query: 821 KGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN 880
K V + + RH NI+ F G+ + Q L +V ++ E SL L T E+ K ++
Sbjct: 57 KNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEM--IKLID 113
Query: 881 VIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFG--TAKFLKPDSSNWSE 938
+ + A + Y+H I+HRD+ S + L + + DFG T K S + +
Sbjct: 114 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 939 LAGTCGYIAPELAYTMRANE---KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNM 995
L+G+ ++APE+ N + DV+ FG+++ E++ G+ P N
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP----------YSNINNR 220
Query: 996 NIVVNDLIDSRLPPPLGEVEEKL-KSMIAVAFLCLDANPDCRPTMQKV---CNLLCR 1048
+ ++ + L P L +V K+M + CL D RP ++ LL R
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 138/309 (44%), Gaps = 38/309 (12%)
Query: 754 RKRTDSQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLH-SLP 812
R R + ++ ++ E+ G+ + G+G GTVYK + GD AVK L+ + P
Sbjct: 8 RNRMKTLGRRDSSDDWEIPDGQITVGQRI--GSGSFGTVYKGKW-HGDV-AVKMLNVTAP 63
Query: 813 TGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAE 872
T + K V + + RH NI+ F G+ + Q L +V ++ E SL L T E
Sbjct: 64 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFE 122
Query: 873 LDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932
+ K +++ + A + Y+H I+HRD+ S + L + + DFG A +
Sbjct: 123 M--IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA----TE 173
Query: 933 SSNWS------ELAGTCGYIAPELAYTMRANE---KCDVFNFGVLVLEVIEGKHPGHFXX 983
S WS +L+G+ ++APE+ N + DV+ FG+++ E++ G+ P
Sbjct: 174 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP----- 228
Query: 984 XXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL-KSMIAVAFLCLDANPDCRPTMQKV 1042
N + ++ + L P L +V K+M + CL D RP ++
Sbjct: 229 -----YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQI 283
Query: 1043 ---CNLLCR 1048
LL R
Sbjct: 284 LASIELLAR 292
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 30/297 (10%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLH-SLPTGEIGINQ 820
G + ++ E+ G+ + G+G GTVYK + GD AVK L+ + PT +
Sbjct: 1 GSDSSDDWEIPDGQITVGQRI--GSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAF 56
Query: 821 KGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN 880
K V + + RH NI+ F G+ + Q L +V ++ E SL L T E+ K ++
Sbjct: 57 KNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEM--IKLID 113
Query: 881 VIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFG--TAKFLKPDSSNWSE 938
+ + A + Y+H I+HRD+ S + L + + DFG T K S + +
Sbjct: 114 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 939 LAGTCGYIAPELAYTMRANE---KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNM 995
L+G+ ++APE+ N + DV+ FG+++ E++ G+ P N
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP----------YSNINNR 220
Query: 996 NIVVNDLIDSRLPPPLGEVEEKL-KSMIAVAFLCLDANPDCRPTMQKV---CNLLCR 1048
+ ++ + L P L +V K+M + CL D RP ++ LL R
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQ--KGFVSEITEIRHRNIVKFYGF 841
G G G VY A E S A+K L + G+ + V + +RH NI++ YG+
Sbjct: 21 GKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
++L+ EY L T+ + D + I +ANALSY H ++
Sbjct: 81 FHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK---RVI 134
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI + +LL + ++DFG + + SS L GT Y+ PE+ +EK D
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL E + G P
Sbjct: 193 LWSLGVLCYEFLVGMPP 209
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 130/275 (47%), Gaps = 35/275 (12%)
Query: 785 GTGGCGTVYKAELTS-GDTRAVKKLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V + L + G + + +L G ++ F+SE + + H NI++ G
Sbjct: 25 GAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEG 84
Query: 841 FCSHTQHLFLVYEYLERGSLATIL---SNEATAAELDWSKRVNVIKGVANALSYMHHDCF 897
+++ + ++ E++E G+L + L + T +L V +++G+A+ + Y+ +
Sbjct: 85 VVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGMRYLAEMSY 139
Query: 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYI-----APELAY 952
+HRD++++ +L++ VSDFG ++FL+ +SS+ +E + G I APE
Sbjct: 140 ---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 953 TMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPL 1011
+ D +++G+++ EV+ G+ P N +++ D RLPPP
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERP----------YWDMSNQDVINAIEQDYRLPPP- 245
Query: 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ S+ + C + + RP +V + L
Sbjct: 246 ---PDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 138/309 (44%), Gaps = 38/309 (12%)
Query: 754 RKRTDSQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLH-SLP 812
R R + ++ ++ E+ G+ + G+G GTVYK + GD AVK L+ + P
Sbjct: 16 RNRMKTLGRRDSSDDWEIPDGQITVGQRI--GSGSFGTVYKGKW-HGDV-AVKMLNVTAP 71
Query: 813 TGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAE 872
T + K V + + RH NI+ F G+ + Q L +V ++ E SL L T E
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFE 130
Query: 873 LDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932
+ K +++ + A + Y+H I+HRD+ S + L + + DFG A +
Sbjct: 131 M--IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA----TE 181
Query: 933 SSNWS------ELAGTCGYIAPELAYTMRANE---KCDVFNFGVLVLEVIEGKHPGHFXX 983
S WS +L+G+ ++APE+ N + DV+ FG+++ E++ G+ P
Sbjct: 182 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP----- 236
Query: 984 XXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL-KSMIAVAFLCLDANPDCRPTMQKV 1042
N + ++ + L P L +V K+M + CL D RP ++
Sbjct: 237 -----YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQI 291
Query: 1043 ---CNLLCR 1048
LL R
Sbjct: 292 LASIELLAR 300
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 40/272 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGF 841
G G G V KA+ + D A+K++ S +K F+ E+ + + H NIVK YG
Sbjct: 18 GRGAFGVVCKAKWRAKDV-AIKQIESES------ERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEA-----TAAE-LDWSKRVNVIKGVANALSYMHHD 895
C + + LV EY E GSL +L TAA + W + + +GVA Y+H
Sbjct: 71 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS--QGVA----YLHSM 122
Query: 896 CFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
++HRD+ +LL + DFGTA ++ +N G+ ++APE+
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPEVFEGS 179
Query: 955 RANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEV 1014
+EKCDVF++G+++ EVI + P F ++ + PP + +
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKP--FDEIGGPAFRIMWAVH-------NGTRPPLIKNL 230
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ ++S++ C +P RP+M+++ ++
Sbjct: 231 PKPIESLMT---RCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its
Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 40/272 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGF 841
G G G V KA+ + D A+K++ S +K F+ E+ + + H NIVK YG
Sbjct: 17 GRGAFGVVCKAKWRAKDV-AIKQIESES------ERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEA-----TAAE-LDWSKRVNVIKGVANALSYMHHD 895
C + + LV EY E GSL +L TAA + W + + +GVA Y+H
Sbjct: 70 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS--QGVA----YLHSM 121
Query: 896 CFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
++HRD+ +LL + DFGTA ++ +N G+ ++APE+
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPEVFEGS 178
Query: 955 RANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEV 1014
+EKCDVF++G+++ EVI + P F ++ + PP + +
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKP--FDEIGGPAFRIMWAVH-------NGTRPPLIKNL 229
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ ++S++ C +P RP+M+++ ++
Sbjct: 230 PKPIESLMT---RCWSKDPSQRPSMEEIVKIM 258
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 36/278 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLH-SLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
G+G GTVYK + GD AVK L+ + PT + K V + + RH NI+ F G+ +
Sbjct: 17 GSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
Q L +V ++ E SL L T E+ K +++ + A + Y+H I+HR
Sbjct: 75 KPQ-LAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 904 DISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS------ELAGTCGYIAPELAYTMRAN 957
D+ S + L + + DFG A + S WS +L+G+ ++APE+ N
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 958 E---KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEV 1014
+ DV+ FG+++ E++ G+ P N + ++ + L P L +V
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP----------YSNINNRDQIIFMVGRGYLSPDLSKV 234
Query: 1015 EEKL-KSMIAVAFLCLDANPDCRPTMQKV---CNLLCR 1048
K+M + CL D RP ++ LL R
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 30/305 (9%)
Query: 754 RKRTDSQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLH-SLP 812
R R + ++ ++ E+ G+ + G+G GTVYK + GD AVK L+ + P
Sbjct: 16 RNRMKTLGRRDSSDDWEIPDGQITVGQRI--GSGSFGTVYKGKW-HGDV-AVKMLNVTAP 71
Query: 813 TGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAE 872
T + K V + + RH NI+ F G+ + Q L +V ++ E SL L T E
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFE 130
Query: 873 LDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFG--TAKFLK 930
+ K +++ + A + Y+H I+HRD+ S + L + + DFG T K
Sbjct: 131 M--IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 185
Query: 931 PDSSNWSELAGTCGYIAPELAYTMRANE---KCDVFNFGVLVLEVIEGKHPGHFXXXXXX 987
S + +L+G+ ++APE+ N + DV+ FG+++ E++ G+ P
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--------- 236
Query: 988 XXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL-KSMIAVAFLCLDANPDCRPTMQKV---C 1043
N + ++ + L P L +V K+M + CL D RP ++
Sbjct: 237 -YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
Query: 1044 NLLCR 1048
LL R
Sbjct: 296 ELLAR 300
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
Length = 282
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 28/274 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLH-SLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
G+G GTVYK + GD AVK L+ + PT + K V + + RH NI+ F G+ +
Sbjct: 19 GSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 76
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
Q L +V ++ E SL L T E+ K +++ + A + Y+H I+HR
Sbjct: 77 KPQ-LAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHR 130
Query: 904 DISSKKVLLDLEYKAHVSDFG--TAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE--- 958
D+ S + L + + DFG T K S + +L+G+ ++APE+ N
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 959 KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL 1018
+ DV+ FG+++ E++ G+ P N + ++ + L P L +V
Sbjct: 191 QSDVYAFGIVLYELMTGQLP----------YSNINNRDQIIFMVGRGYLSPDLSKVRSNC 240
Query: 1019 -KSMIAVAFLCLDANPDCRPTMQKV---CNLLCR 1048
K+M + CL D RP ++ LL R
Sbjct: 241 PKAMKRLMAECLKKKRDERPLFPQILASIELLAR 274
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVK--KLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A E SG AVK L E+ N+ V + + +H N+V+ Y
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNE---VVIMRDYQHFNVVEMYKS 110
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ L+++ E+L+ G+L I+S L+ + V + V AL+Y+H ++
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVI 163
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL L+ + +SDFG + D L GT ++APE+ + D
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++V+E+++G+ P
Sbjct: 224 IWSLGIMVIEMVDGEPP 240
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 30/305 (9%)
Query: 754 RKRTDSQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLH-SLP 812
R R + ++ ++ E+ G+ + G+G GTVYK + GD AVK L+ + P
Sbjct: 15 RNRMKTLGRRDSSDDWEIPDGQITVGQRI--GSGSFGTVYKGKW-HGDV-AVKMLNVTAP 70
Query: 813 TGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAE 872
T + K V + + RH NI+ F G+ + Q L +V ++ E SL L T E
Sbjct: 71 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFE 129
Query: 873 LDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFG--TAKFLK 930
+ K +++ + A + Y+H I+HRD+ S + L + + DFG T K
Sbjct: 130 M--IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 184
Query: 931 PDSSNWSELAGTCGYIAPELAYTMRANE---KCDVFNFGVLVLEVIEGKHPGHFXXXXXX 987
S + +L+G+ ++APE+ N + DV+ FG+++ E++ G+ P
Sbjct: 185 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--------- 235
Query: 988 XXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL-KSMIAVAFLCLDANPDCRPTMQKV---C 1043
N + ++ + L P L +V K+M + CL D RP ++
Sbjct: 236 -YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 294
Query: 1044 NLLCR 1048
LL R
Sbjct: 295 ELLAR 299
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 28/274 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLH-SLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
G+G GTVYK + GD AVK L+ + PT + K V + + RH NI+ F G+ +
Sbjct: 17 GSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
Q L +V ++ E SL L T E+ K +++ + A + Y+H I+HR
Sbjct: 75 KPQ-LAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 904 DISSKKVLLDLEYKAHVSDFG--TAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE--- 958
D+ S + L + + DFG T K S + +L+G+ ++APE+ N
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 959 KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL 1018
+ DV+ FG+++ E++ G+ P N + ++ + L P L +V
Sbjct: 189 QSDVYAFGIVLYELMTGQLP----------YSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 1019 -KSMIAVAFLCLDANPDCRPTMQKV---CNLLCR 1048
K+M + CL D RP ++ LL R
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 23/203 (11%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G+G G V+ + D A+K + E ++++ F+ E + ++ H +V+ YG
Sbjct: 14 GSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEAT--AAELDWSKRVNVIKGVANALSYMHHDCFPP 899
C + LV+E++E G L+ L + AAE ++V +G+A Y+ C
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC--- 121
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRA 956
++HRD++++ L+ VSDFG +F+ D ++ GT + +PE+ R
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 179
Query: 957 NEKCDVFNFGVLVLEVI-EGKHP 978
+ K DV++FGVL+ EV EGK P
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 23/203 (11%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G+G G V+ + D A+K + E ++++ F+ E + ++ H +V+ YG
Sbjct: 19 GSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEAT--AAELDWSKRVNVIKGVANALSYMHHDCFPP 899
C + LV+E++E G L+ L + AAE ++V +G+A Y+ C
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC--- 126
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRA 956
++HRD++++ L+ VSDFG +F+ D ++ GT + +PE+ R
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 184
Query: 957 NEKCDVFNFGVLVLEVI-EGKHP 978
+ K DV++FGVL+ EV EGK P
Sbjct: 185 SSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 23/203 (11%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G+G G V+ + D A+K + E ++++ F+ E + ++ H +V+ YG
Sbjct: 16 GSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEAT--AAELDWSKRVNVIKGVANALSYMHHDCFPP 899
C + LV+E++E G L+ L + AAE ++V +G+A Y+ C
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC--- 123
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRA 956
++HRD++++ L+ VSDFG +F+ D ++ GT + +PE+ R
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 957 NEKCDVFNFGVLVLEVI-EGKHP 978
+ K DV++FGVL+ EV EGK P
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 28/274 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLH-SLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
G+G GTVYK + GD AVK L+ + PT + K V + + RH NI+ F G+ +
Sbjct: 17 GSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
Q L +V ++ E SL L T E+ K +++ + A + Y+H I+HR
Sbjct: 75 APQ-LAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 904 DISSKKVLLDLEYKAHVSDFG--TAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE--- 958
D+ S + L + + DFG T K S + +L+G+ ++APE+ N
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 959 KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL 1018
+ DV+ FG+++ E++ G+ P N + ++ + L P L +V
Sbjct: 189 QSDVYAFGIVLYELMTGQLP----------YSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 1019 -KSMIAVAFLCLDANPDCRPTMQKV---CNLLCR 1048
K+M + CL D RP ++ LL R
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A E +G AVKK L E+ N+ V + + H N+V Y
Sbjct: 54 GEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNE---VVIMRDYHHDNVVDMYSS 110
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V E+LE G+L I+ T ++ + V V ALSY+H+ ++
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIATVCLSVLRALSYLHNQ---GVI 163
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL + + +SDFG + + L GT ++APE+ + + D
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVD 223
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++V+E+I+G+ P
Sbjct: 224 IWSLGIMVIEMIDGEPP 240
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 23/203 (11%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G+G G V+ + D A+K + E +++ F+ E + ++ H +V+ YG
Sbjct: 36 GSGQFGLVHLGYWLNKDKVAIKTIK-----EGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEAT--AAELDWSKRVNVIKGVANALSYMHHDCFPP 899
C + LV+E++E G L+ L + AAE ++V +G+A Y+ C
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC--- 143
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRA 956
++HRD++++ L+ VSDFG +F+ D ++ GT + +PE+ R
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 201
Query: 957 NEKCDVFNFGVLVLEVI-EGKHP 978
+ K DV++FGVL+ EV EGK P
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 823 FVSEIT---EIRHRNIVKFYG--FCSHTQHLFLVYEYLERGSLATILSNEATAAE-LDWS 876
VSE+ E++H NIV++Y L++V EY E G LA++++ + LD
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 877 KRVNVIKGVANALSYMHH--DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934
+ V+ + AL H D +LHRD+ V LD + + DFG A+ L D
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED 171
Query: 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
E GT Y++PE M NEK D+++ G L+ E+
Sbjct: 172 FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 129/275 (46%), Gaps = 35/275 (12%)
Query: 785 GTGGCGTVYKAELTS-GDTRAVKKLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V + L + G + + +L G ++ F+SE + + H NI++ G
Sbjct: 23 GAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEG 82
Query: 841 FCSHTQHLFLVYEYLERGSLATIL---SNEATAAELDWSKRVNVIKGVANALSYMHHDCF 897
+++ + ++ E++E G+L + L + T +L V +++G+A+ + Y+ +
Sbjct: 83 VVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGMRYLAEMSY 137
Query: 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYI-----APELAY 952
+HRD++++ +L++ VSDFG ++FL+ +SS+ + + G I APE
Sbjct: 138 ---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 953 TMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPL 1011
+ D +++G+++ EV+ G+ P N +++ D RLPPP
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERP----------YWDMSNQDVINAIEQDYRLPPP- 243
Query: 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ S+ + C + + RP +V + L
Sbjct: 244 ---PDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKAEL-TSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A + +SG AVKK L E+ N+ V + + +H N+V+ Y
Sbjct: 29 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE---VVIMRDYQHENVVEMYNS 85
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V E+LE G+L I+ T ++ + V V ALS +H ++
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 138
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL + + +SDFG + + L GT ++APEL + + D
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++V+E+++G+ P
Sbjct: 199 IWSLGIMVIEMVDGEPP 215
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 823 FVSEIT---EIRHRNIVKFYG--FCSHTQHLFLVYEYLERGSLATILSNEATAAE-LDWS 876
VSE+ E++H NIV++Y L++V EY E G LA++++ + LD
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 877 KRVNVIKGVANALSYMHH--DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934
+ V+ + AL H D +LHRD+ V LD + + DFG A+ L D+S
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
GT Y++PE M NEK D+++ G L+ E+
Sbjct: 172 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKAEL-TSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A + +SG AVKK L E+ N+ V + + +H N+V+ Y
Sbjct: 38 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE---VVIMRDYQHENVVEMYNS 94
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V E+LE G+L I+ T ++ + V V ALS +H ++
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 147
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL + + +SDFG + + L GT ++APEL + + D
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++V+E+++G+ P
Sbjct: 208 IWSLGIMVIEMVDGEPP 224
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 29/272 (10%)
Query: 785 GTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L G + +L +G ++ F+SE + + H N++ G
Sbjct: 42 GAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEG 101
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ + + ++ E++E GSL + L + + V +++G+A + Y+ +
Sbjct: 102 VVTKSTPVMIITEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLADMNY--- 156
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYI-----APELAYTMR 955
+HRD++++ +L++ VSDFG ++FL+ D+S+ + + G I APE +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 216
Query: 956 ANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEV 1014
DV+++G+++ EV+ G+ P N +++ D RLPPP+ +
Sbjct: 217 FTSASDVWSYGIVMWEVMSYGERP----------YWDMTNQDVINAIEQDYRLPPPM-DC 265
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
L ++ C + + RP ++ N L
Sbjct: 266 PSALHQLM---LDCWQKDRNHRPKFGQIVNTL 294
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 823 FVSEIT---EIRHRNIVKFYG--FCSHTQHLFLVYEYLERGSLATILSNEATAAE-LDWS 876
VSE+ E++H NIV++Y L++V EY E G LA++++ + LD
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 877 KRVNVIKGVANALSYMHH--DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934
+ V+ + AL H D +LHRD+ V LD + + DFG A+ L D+S
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
GT Y++PE M NEK D+++ G L+ E+
Sbjct: 172 FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKAEL-TSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A + +SG AVKK L E+ N+ V + + +H N+V+ Y
Sbjct: 33 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE---VVIMRDYQHENVVEMYNS 89
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V E+LE G+L I+ T ++ + V V ALS +H ++
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 142
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL + + +SDFG + + L GT ++APEL + + D
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++V+E+++G+ P
Sbjct: 203 IWSLGIMVIEMVDGEPP 219
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKAEL-TSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A + +SG AVKK L E+ N+ V + + +H N+V+ Y
Sbjct: 40 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE---VVIMRDYQHENVVEMYNS 96
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V E+LE G+L I+ T ++ + V V ALS +H ++
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 149
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL + + +SDFG + + L GT ++APEL + + D
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++V+E+++G+ P
Sbjct: 210 IWSLGIMVIEMVDGEPP 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 23/203 (11%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G+G G V+ + D A+K + E ++++ F+ E + ++ H +V+ YG
Sbjct: 17 GSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEAT--AAELDWSKRVNVIKGVANALSYMHHDCFPP 899
C + LV E++E G L+ L + AAE ++V +G+A Y+ C
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC--- 124
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRA 956
++HRD++++ L+ VSDFG +F+ D ++ GT + +PE+ R
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 182
Query: 957 NEKCDVFNFGVLVLEVI-EGKHP 978
+ K DV++FGVL+ EV EGK P
Sbjct: 183 SSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKAEL-TSGDTRAVKK--LHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A + +SG AVKK L E+ N+ V + + +H N+V+ Y
Sbjct: 83 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE---VVIMRDYQHENVVEMYNS 139
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L++V E+LE G+L I+ T ++ + V V ALS +H ++
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 192
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRDI S +LL + + +SDFG + + L GT ++APEL + + D
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 252
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G++V+E+++G+ P
Sbjct: 253 IWSLGIMVIEMVDGEPP 269
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 125/275 (45%), Gaps = 35/275 (12%)
Query: 785 GTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L G + +L +G ++ F+SE + + H N++ G
Sbjct: 16 GAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEG 75
Query: 841 FCSHTQHLFLVYEYLERGSLATILSN---EATAAELDWSKRVNVIKGVANALSYMHHDCF 897
+ + + ++ E++E GSL + L + T +L V +++G+A + Y+ +
Sbjct: 76 VVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-----VGMLRGIAAGMKYLADMNY 130
Query: 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPELAY 952
+HR ++++ +L++ VSDFG ++FL+ D+S+ + + G + APE
Sbjct: 131 ---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 953 TMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPL 1011
+ DV+++G+++ EV+ G+ P N +++ D RLPPP+
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERP----------YWDMTNQDVINAIEQDYRLPPPM 237
Query: 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ ++ + C + + RP ++ N L
Sbjct: 238 ----DCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 23/203 (11%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G+G G V+ + D A+K + E ++++ F+ E + ++ H +V+ YG
Sbjct: 16 GSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEAT--AAELDWSKRVNVIKGVANALSYMHHDCFPP 899
C + LV+E++E G L+ L + AAE ++V +G+A Y+
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEE---AS 123
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRA 956
++HRD++++ L+ VSDFG +F+ D ++ GT + +PE+ R
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 957 NEKCDVFNFGVLVLEVI-EGKHP 978
+ K DV++FGVL+ EV EGK P
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V EY+E GSL + L A+ + V +++G+A+ + Y+ F
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGF--- 168
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGT--CGYIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + +PE +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 229 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 274
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V EY+E GSL + L A+ + V +++G+A+ + Y+ +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGT--CGYIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG A+ L+ D + ++ G + +PE +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 229 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 274
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.2 bits (178), Expect = 8e-13, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVA 886
+ ++ H +VKFYG CS +++V EY+ G L L + L+ S+ + + V
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVC 114
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---C 943
++++ F +HRD++++ L+D + VSDFG +++ D + GT
Sbjct: 115 EGMAFLESHQF---IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD--QYVSSVGTKFPV 169
Query: 944 GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDL 1002
+ APE+ + + + K DV+ FG+L+ EV GK P N +V+
Sbjct: 170 KWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP----------YDLYTNSEVVLKVS 219
Query: 1003 IDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
RL P ++ + + C P+ RPT Q++
Sbjct: 220 QGHRLYRP----HLASDTIYQIMYSCWHELPEKRPTFQQL 255
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRH---RNIVKFYG 840
G G G+VYKA +G A+K++ + + + + EI+ ++ ++VK+YG
Sbjct: 38 GEGSYGSVYKAIHKETGQIVAIKQV------PVESDLQEIIKEISIMQQCDSPHVVKYYG 91
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
L++V EY GS++ I+ D + +++ L Y+H F
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGLEYLH---FMRK 146
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
+HRDI + +LL+ E A ++DFG A L + + + GT ++APE+ + N
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ G+ +E+ EGK P
Sbjct: 207 DIWSLGITAIEMAEGKPP 224
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 785 GTGGCGTVYKAEL--TSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFY 839
G G G VYK L +SG + +L G + F+ E + + H NI++
Sbjct: 53 GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLE 112
Query: 840 GFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
G S + + ++ EY+E G+L L + E + V +++G+A + Y+ + +
Sbjct: 113 GVISKYKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANMNY-- 168
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG---TCGYIAPELAYTMRA 956
+HRD++++ +L++ VSDFG ++ L+ D +G + APE +
Sbjct: 169 -VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF 227
Query: 957 NEKCDVFNFGVLVLEVIE-GKHP 978
DV++FG+++ EV+ G+ P
Sbjct: 228 TSASDVWSFGIVMWEVMTYGERP 250
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 784 HGTGGCGTVYKAELTSG----DTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFY 839
H + K++ G D + ++K H EI + + + H NI+K +
Sbjct: 61 HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL--------LKSLDHPNIIKLF 112
Query: 840 GFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
++ +LV E+ E G L + N E D + N++K + + + Y+H
Sbjct: 113 DVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA---NIMKQILSGICYLHK---HN 166
Query: 900 ILHRDISSKKVLLDLE---YKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRA 956
I+HRDI + +LL+ + + DFG + F D L GT YIAPE+ +
Sbjct: 167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL-GTAYYIAPEVL-KKKY 224
Query: 957 NEKCDVFNFGVLVLEVIEGKHP 978
NEKCDV++ GV++ ++ G P
Sbjct: 225 NEKCDVWSCGVIMYILLCGYPP 246
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGF 841
G GG TVY AE T + + K +P E K F E+ +++ H+NIV
Sbjct: 20 GGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDV 79
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+LV EY+E +L+ + + L +N + + + + H I+
Sbjct: 80 DEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHD---MRIV 133
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS-SNWSELAGTCGYIAPELAYTMRANEKC 960
HRDI + +L+D + DFG AK L S + + + GT Y +PE A +E
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECT 193
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ G+++ E++ G+ P
Sbjct: 194 DIYSIGIVLYEMLVGEPP 211
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii-
38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 42 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 101
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V EY+E GSL + L A+ + V +++G+A+ + Y+ +
Sbjct: 102 VVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGY--- 156
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGT--CGYIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + +PE +
Sbjct: 157 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 216
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 217 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 262
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 263 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V EY+E GSL + L A+ + V +++G+A+ + Y+ +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGT--CGYIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + +PE +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 229 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 274
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 33/241 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G+G G V L R V + +L G ++ F+SE + + H NI++ G
Sbjct: 58 GSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEG 117
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ + +V EY+E GSL T L + + V +++GV + Y+ +
Sbjct: 118 VVTRGRLAMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDLGY--- 172
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG---TCGYIAPELAYTMRAN 957
+HRD++++ VL+D VSDFG ++ L+ D G + APE +
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDS-----RLPPPL 1011
DV++FGV++ EV+ G+ P N+ D+I S RLP P+
Sbjct: 233 SASDVWSFGVVMWEVLAYGERP---------------YWNMTNRDVISSVEEGYRLPAPM 277
Query: 1012 G 1012
G
Sbjct: 278 G 278
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V EY+E GSL + L A+ + V +++G+A+ + Y+ +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGT--CGYIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + +PE +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 229 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 274
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V EY+E GSL + L A+ + V +++G+A+ + Y+ +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGT--CGYIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + +PE +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 229 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 274
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Phosphorylated,
Amp-pnp Bound
Length = 373
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V EY+E GSL + L A+ + V +++G+A+ + Y+ +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGT--CGYIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + +PE +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 229 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 274
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 27/158 (17%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEAT---------AAELDWSKRVN 880
+ H I++ +G Q +F++ +Y+E G L ++L AAE
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE-------- 114
Query: 881 VIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA 940
V AL Y+H I++RD+ + +LLD ++DFG AK++ PD + L
Sbjct: 115 ----VCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT--YXLC 164
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT YIAPE+ T N+ D ++FG+L+ E++ G P
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 52 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 111
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V EY+E GSL + L A+ + V +++G+A+ + Y+ +
Sbjct: 112 VVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGY--- 166
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGT--CGYIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + +PE +
Sbjct: 167 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 226
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 227 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 272
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 273 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 33/241 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G+G G V L R V + +L G ++ F+SE + + H NI++ G
Sbjct: 58 GSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEG 117
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ + +V EY+E GSL T L + + V +++GV + Y+ +
Sbjct: 118 VVTRGRLAMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDLGY--- 172
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGTCG--YIAPELAYTMRAN 957
+HRD++++ VL+D VSDFG ++ L+ D + ++ G + APE +
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDS-----RLPPPL 1011
DV++FGV++ EV+ G+ P N+ D+I S RLP P+
Sbjct: 233 SASDVWSFGVVMWEVLAYGERP---------------YWNMTNRDVISSVEEGYRLPAPM 277
Query: 1012 G 1012
G
Sbjct: 278 G 278
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g
Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 124/270 (45%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V EY+E GSL + L A+ + V +++G+A+ + Y+ +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGT--CGYIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG + L+ D + ++ G + +PE +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 229 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 274
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 25 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 84
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V EY+E GSL + L A+ + V +++G+A+ + Y+ +
Sbjct: 85 VVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGY--- 139
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGTCG--YIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + +PE +
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 200 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 245
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
+ K+YG L+++ EYL GS +L A D + ++K + L Y+H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHS 138
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
+ +HRDI + VLL + ++DFG A L + GT ++APE+
Sbjct: 139 E---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS 195
Query: 955 RANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPL-GE 1013
+ K D+++ G+ +E+ +G+ P M ++ LI PP L G+
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPN----------SDMHPMRVLF--LIPKNNPPTLVGD 243
Query: 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+ K I CL+ +P RPT +++
Sbjct: 244 FTKSFKEFIDA---CLNKDPSFRPTAKEL 269
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 33/233 (14%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSN-----EATAAELDWSKR 878
+ +++ H NIV +Y L+LV + L GS+ I+ + E + LD S
Sbjct: 59 IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 118
Query: 879 VNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-----S 933
+++ V L Y+H + +HRD+ + +LL + ++DFG + FL +
Sbjct: 119 ATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 175
Query: 934 SNWSELAGTCGYIAPELAYTMRANE-KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXX 992
GT ++APE+ +R + K D+++FG+ +E+ G P H
Sbjct: 176 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH----------KY 225
Query: 993 XNMNIVVNDLIDSRLPPPL--GEVEEKL-----KSMIAVAFLCLDANPDCRPT 1038
M +++ L + PP L G ++++ KS + LCL +P+ RPT
Sbjct: 226 PPMKVLMLTLQND--PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 33/233 (14%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSN-----EATAAELDWSKR 878
+ +++ H NIV +Y L+LV + L GS+ I+ + E + LD S
Sbjct: 64 IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 123
Query: 879 VNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-----S 933
+++ V L Y+H + +HRD+ + +LL + ++DFG + FL +
Sbjct: 124 ATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 180
Query: 934 SNWSELAGTCGYIAPELAYTMRANE-KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXX 992
GT ++APE+ +R + K D+++FG+ +E+ G P H
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH----------KY 230
Query: 993 XNMNIVVNDLIDSRLPPPL--GEVEEKL-----KSMIAVAFLCLDANPDCRPT 1038
M +++ L + PP L G ++++ KS + LCL +P+ RPT
Sbjct: 231 PPMKVLMLTLQND--PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
In Complex With Staurosporine
Length = 304
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
+ K+YG L+++ EYL GS +L LD ++ +++ + L Y+H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHS 122
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
+ +HRDI + VLL + ++DFG A L + GT ++APE+
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 955 RANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPL-GE 1013
+ K D+++ G+ +E+ G+ P M ++ LI PP L G
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP----------HSELHPMKVLF--LIPKNNPPTLEGN 227
Query: 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+ LK + CL+ P RPT +++
Sbjct: 228 YSKPLKEFVEA---CLNKEPSFRPTAKEL 253
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
+ K+YG L+++ EYL GS +L LD ++ +++ + L Y+H
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHS 142
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
+ +HRDI + VLL + ++DFG A L + GT ++APE+
Sbjct: 143 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 199
Query: 955 RANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPL-GE 1013
+ K D+++ G+ +E+ G+ P M ++ LI PP L G
Sbjct: 200 AYDSKADIWSLGITAIELARGEPP----------HSELHPMKVLF--LIPKNNPPTLEGN 247
Query: 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+ LK + CL+ P RPT +++
Sbjct: 248 YSKPLKEFVEA---CLNKEPSFRPTAKEL 273
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
Length = 304
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
+ K+YG L+++ EYL GS +L LD ++ +++ + L Y+H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHS 122
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
+ +HRDI + VLL + ++DFG A L + GT ++APE+
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 955 RANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPL-GE 1013
+ K D+++ G+ +E+ G+ P M ++ LI PP L G
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP----------HSELHPMKVLF--LIPKNNPPTLEGN 227
Query: 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+ LK + CL+ P RPT +++
Sbjct: 228 YSKPLKEFVEA---CLNKEPSFRPTAKEL 253
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 125/302 (41%), Gaps = 48/302 (15%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR--AVKKLH------SLPTGEI----GI 818
L AS FE VL G G G V KA + D+R A+KK+ S E+ +
Sbjct: 2 LRYASDFEEIAVL-GQGAFGQVVKAR-NALDSRYYAIKKIRHTEEKLSTILSEVMLLASL 59
Query: 819 NQKGFVSEITE-IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK 877
N + V + RN VK LF+ EY E G+L ++ +E + D
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 878 RVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK-------FLK 930
R+ + + ALSY+H I+HRD+ + +D + DFG AK LK
Sbjct: 120 RL--FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 931 PD-------SSNWSELAGTCGYIAPE-LAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFX 982
D S N + GT Y+A E L T NEK D+++ G++ E+I +P
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTG 231
Query: 983 XXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+++I PP + K+K + L +D +P+ RP + +
Sbjct: 232 MERVNILKKLRSVSI--------EFPPDFD--DNKMKVEKKIIRLLIDHDPNKRPGARTL 281
Query: 1043 CN 1044
N
Sbjct: 282 LN 283
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
+ K+YG L+++ EYL GS +L LD ++ +++ + L Y+H
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHS 137
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
+ +HRDI + VLL + ++DFG A L + GT ++APE+
Sbjct: 138 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 955 RANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPL-GE 1013
+ K D+++ G+ +E+ G+ P M ++ LI PP L G
Sbjct: 195 AYDSKADIWSLGITAIELARGEPP----------HSELHPMKVLF--LIPKNNPPTLEGN 242
Query: 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+ LK + CL+ P RPT +++
Sbjct: 243 YSKPLKEFVEA---CLNKEPSFRPTAKEL 268
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 124/270 (45%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V E +E GSL + L A+ + V +++G+A+ + Y+ +
Sbjct: 114 VVTKSKPVMIVTEXMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGT--CGYIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + +PE +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 229 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 274
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 10/194 (5%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGFC 842
G G G VYKA+ G+T A+KK+ L + GI +S + E++H NIVK Y
Sbjct: 11 GEGTYGVVYKAQNNYGETFALKKIR-LEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 843 SHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILH 902
+ L LV+E+L++ L +L + L+ + + + N ++Y H +LH
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 903 RDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LAYTMRANEKCD 961
RD+ + +L++ E + ++DFG A+ ++ T Y AP+ L + + + D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 962 VFNFGVLVLEVIEG 975
+++ G + E++ G
Sbjct: 184 IWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 10/194 (5%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGFC 842
G G G VYKA+ G+T A+KK+ L + GI +S + E++H NIVK Y
Sbjct: 11 GEGTYGVVYKAQNNYGETFALKKIR-LEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 843 SHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILH 902
+ L LV+E+L++ L +L + L+ + + + N ++Y H +LH
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 903 RDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LAYTMRANEKCD 961
RD+ + +L++ E + ++DFG A+ ++ T Y AP+ L + + + D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 962 VFNFGVLVLEVIEG 975
+++ G + E++ G
Sbjct: 184 IWSVGCIFAEMVNG 197
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 2/200 (1%)
Query: 164 VSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKN-QLSGS 222
+ LH N S V S +NLT ++L++N + + L L L L+ N QL
Sbjct: 36 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 95
Query: 223 IPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLK 282
P T L L L+L L P +L YLYL N L +F +L +L
Sbjct: 96 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLT 155
Query: 283 HLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYG 342
HL +H N++S + L SL L L + +++ P + +L + LY+ N L
Sbjct: 156 HLFLHG-NRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 214
Query: 343 SIPEELGRLKSLSQLSLSVN 362
E L L++L L L+ N
Sbjct: 215 LPTEALAPLRALQYLRLNDN 234
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 236 LYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGS 295
++LH NR+S + ++L L+L N L ++F L+ L+ L + + +L
Sbjct: 36 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 95
Query: 296 IPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGR-LKSL 354
P L L L L + L P L+ ++ LY+++N L ++P++ R L +L
Sbjct: 96 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNL 154
Query: 355 SQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTG 414
+ L L N+++ L +L L +N ++ P ++ +L LF N +
Sbjct: 155 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 214
Query: 415 YLPQNVCQSGSLTHFSVRNNNFV 437
+ + +L + + +N +V
Sbjct: 215 LPTEALAPLRALQYLRLNDNPWV 237
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 153 QDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYL 212
+DLGNL + LH N S V R+ GL +L + L+ NR+ P +L L L
Sbjct: 149 RDLGNL---THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 205
Query: 213 GLNKNQLSGSIPPTAGNLSNLKFLYLHDN 241
L N LS L L++L L+DN
Sbjct: 206 YLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 29.6 bits (65), Expect = 9.3, Method: Composition-based stats.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 15/185 (8%)
Query: 287 HNINKLSGSIPKE------IGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENML 340
+N K++ S P++ +G + ++L ++S S N+ L++ N+L
Sbjct: 8 YNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVL 67
Query: 341 YGSIPEELGRLKSLSQLSLSVN-KLNGSIP---HCLGNLSNLKFFALRENELSGSIPQEI 396
L L QL LS N +L P H LG L L EL P
Sbjct: 68 ARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELG---PGLF 124
Query: 397 ENMKKLNKYLLFENQFTGYLPQNVCQS-GSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRL 455
+ L +YL ++ LP + + G+LTH + N R+ + SL L L
Sbjct: 125 RGLAAL-QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 183
Query: 456 ERNQL 460
+N++
Sbjct: 184 HQNRV 188
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 2/200 (1%)
Query: 164 VSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKN-QLSGS 222
+ LH N S V S +NLT ++L++N + + L L L L+ N QL
Sbjct: 37 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 96
Query: 223 IPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLK 282
P T L L L+L L P +L YLYL N L +F +L +L
Sbjct: 97 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLT 156
Query: 283 HLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYG 342
HL +H N++S + L SL L L + +++ P + +L + LY+ N L
Sbjct: 157 HLFLHG-NRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215
Query: 343 SIPEELGRLKSLSQLSLSVN 362
E L L++L L L+ N
Sbjct: 216 LPTEALAPLRALQYLRLNDN 235
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 236 LYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGS 295
++LH NR+S + ++L L+L N L ++F L+ L+ L + + +L
Sbjct: 37 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 96
Query: 296 IPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGR-LKSL 354
P L L L L + L P L+ ++ LY+++N L ++P++ R L +L
Sbjct: 97 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNL 155
Query: 355 SQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTG 414
+ L L N+++ L +L L +N ++ P ++ +L LF N +
Sbjct: 156 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215
Query: 415 YLPQNVCQSGSLTHFSVRNNNFV 437
+ + +L + + +N +V
Sbjct: 216 LPTEALAPLRALQYLRLNDNPWV 238
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 153 QDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYL 212
+DLGNL + LH N S V R+ GL +L + L+ NR+ P +L L L
Sbjct: 150 RDLGNL---THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 206
Query: 213 GLNKNQLSGSIPPTAGNLSNLKFLYLHDN 241
L N LS L L++L L+DN
Sbjct: 207 YLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 29.6 bits (65), Expect = 9.9, Method: Composition-based stats.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 15/185 (8%)
Query: 287 HNINKLSGSIPKE------IGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENML 340
+N K++ S P++ +G + ++L ++S S N+ L++ N+L
Sbjct: 9 YNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVL 68
Query: 341 YGSIPEELGRLKSLSQLSLSVN-KLNGSIP---HCLGNLSNLKFFALRENELSGSIPQEI 396
L L QL LS N +L P H LG L L EL P
Sbjct: 69 ARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELG---PGLF 125
Query: 397 ENMKKLNKYLLFENQFTGYLPQNVCQS-GSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRL 455
+ L +YL ++ LP + + G+LTH + N R+ + SL L L
Sbjct: 126 RGLAAL-QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184
Query: 456 ERNQL 460
+N++
Sbjct: 185 HQNRV 189
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 10/194 (5%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGFC 842
G G G VYKA+ G+T A+KK+ L + GI +S + E++H NIVK Y
Sbjct: 11 GEGTYGVVYKAQNNYGETFALKKIR-LEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 843 SHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILH 902
+ L LV+E+L++ L +L + L+ + + + N ++Y H +LH
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 903 RDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LAYTMRANEKCD 961
RD+ + +L++ E + ++DFG A+ ++ T Y AP+ L + + + D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTID 183
Query: 962 VFNFGVLVLEVIEG 975
+++ G + E++ G
Sbjct: 184 IWSVGCIFAEMVNG 197
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 43/268 (16%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 24 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E T L + V++ +A+ ++Y+ + +
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVERMNY---V 133
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRANE 958
HRD+ + +L+ V+DFG A+ + + + W+ G + APE A R
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 959 KCDVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLG 1012
K DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP
Sbjct: 192 KSDVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP-- 235
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E E L ++ C P+ RPT +
Sbjct: 236 ECPESLHDLMC---QCWRKEPEERPTFE 260
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G G V+ A+K L Q+ V + ++RH +V+ Y S
Sbjct: 276 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV--MKKLRHEKLVQLYAVVSE 333
Query: 845 TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRD 904
+ +++V EY+ +GSL L E T L + V++ +A+ ++Y+ + +HRD
Sbjct: 334 -EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 388
Query: 905 ISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKCDVF 963
+ + +L+ V+DFG A+ ++ + + A + APE A R K DV+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 964 NFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEVEEK 1017
+FG+L+ E+ +G+ +PG +N V D ++ R+P PP E E
Sbjct: 449 SFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--ECPES 492
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
L ++ C P+ RPT + + L
Sbjct: 493 LHDLMC---QCWRKEPEERPTFEYLQAFL 518
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 12/215 (5%)
Query: 769 QELLSASTFEGKMVLHGTGGCGTVYKAELTSG-DTRAVKKLHSLPTGEIGINQKGFVSE- 826
E S FE VL G G G V+ + SG D R + + L + + +
Sbjct: 18 HEKADPSQFELLKVL-GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 827 ---ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+ E+ H IVK + L+L+ ++L G L T LS E E D +
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK---FYLA 133
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTC 943
+A AL ++H I++RD+ + +LLD E ++DFG +K GT
Sbjct: 134 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 944 GYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y+APE+ + D ++FGVL+ E++ G P
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 12/215 (5%)
Query: 769 QELLSASTFEGKMVLHGTGGCGTVYKAELTSG-DTRAVKKLHSLPTGEIGINQKGFVSE- 826
E S FE VL G G G V+ + SG D R + + L + + +
Sbjct: 19 HEKADPSQFELLKVL-GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 77
Query: 827 ---ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+ E+ H IVK + L+L+ ++L G L T LS E E D +
Sbjct: 78 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK---FYLA 134
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTC 943
+A AL ++H I++RD+ + +LLD E ++DFG +K GT
Sbjct: 135 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 191
Query: 944 GYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y+APE+ + D ++FGVL+ E++ G P
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 12/215 (5%)
Query: 769 QELLSASTFEGKMVLHGTGGCGTVYKAELTSG-DTRAVKKLHSLPTGEIGINQKGFVSE- 826
E S FE VL G G G V+ + SG D R + + L + + +
Sbjct: 18 HEKADPSQFELLKVL-GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 827 ---ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+ E+ H IVK + L+L+ ++L G L T LS E E D +
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK---FYLA 133
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTC 943
+A AL ++H I++RD+ + +LLD E ++DFG +K GT
Sbjct: 134 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 944 GYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y+APE+ + D ++FGVL+ E++ G P
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 123/270 (45%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V E +E GSL + L A+ + V +++G+A+ + Y+
Sbjct: 114 VVTKSKPVMIVTEXMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSD---MGA 168
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGT--CGYIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + +PE +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 229 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 274
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src, In
Complex With Amp-pnp
Length = 452
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 31/262 (11%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G G V+ A+K L Q+ V + ++RH +V+ Y S
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV--MKKLRHEKLVQLYAVVSE 250
Query: 845 TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRD 904
+ +++V EY+ +GSL L E T L + V++ +A+ ++Y+ + +HRD
Sbjct: 251 -EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 305
Query: 905 ISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKCDVF 963
+ + +L+ V+DFG A+ ++ + + A + APE A R K DV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 964 NFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLPPPLGEVEEKL 1018
+FG+L+ E+ +G+ +PG +N V D ++ R+P P E E L
Sbjct: 366 SFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCP-PECPESL 410
Query: 1019 KSMIAVAFLCLDANPDCRPTMQ 1040
++ C P+ RPT +
Sbjct: 411 HDLMC---QCWRKEPEERPTFE 429
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 31/262 (11%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G G V+ A+K L Q+ V + ++RH +V+ Y S
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV--MKKLRHEKLVQLYAVVSE 250
Query: 845 TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRD 904
+ +++V EY+ +GSL L E T L + V++ +A+ ++Y+ + +HRD
Sbjct: 251 -EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 305
Query: 905 ISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKCDVF 963
+ + +L+ V+DFG A+ ++ + + A + APE A R K DV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 964 NFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLPPPLGEVEEKL 1018
+FG+L+ E+ +G+ +PG +N V D ++ R+P P E E L
Sbjct: 366 SFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCP-PECPESL 410
Query: 1019 KSMIAVAFLCLDANPDCRPTMQ 1040
++ C P+ RPT +
Sbjct: 411 HDLMC---QCWRKEPEERPTFE 429
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 785 GTGGCGTVYKAE---LTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKF 838
G G G V+ AE L+ + + + +L + +K F E +T ++H +IVKF
Sbjct: 24 GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA-RKDFQREAELLTNLQHEHIVKF 82
Query: 839 YGFCSHTQHLFLVYEYLERGSLATILSNEATAA-------------ELDWSKRVNVIKGV 885
YG C L +V+EY++ G L L A EL S+ +++ +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 886 ANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG---- 941
A+ + Y+ F +HRD++++ L+ + DFG ++ + S+++ + G
Sbjct: 143 ASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSRDVY--STDYYRVGGHTML 197
Query: 942 TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
++ PE + + DV++FGV++ E+ GK P
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 124/270 (45%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L + + + +L G ++ F+ E + + H NI++ G
Sbjct: 25 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 84
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V E +E GSL + L A+ + V +++G+A+ + Y+ +
Sbjct: 85 VVTKSKPVMIVTEXMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGY--- 139
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGTCG--YIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + +PE +
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP+ +
Sbjct: 200 SASDVWSYGIVLWEVMSYGERP----------YWEMSNQDVIKAVDEGYRLPPPM----D 245
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + + RP +++ ++L
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 779 GKMVLHGTGGCGTVYKAEL----TSGDTRAVK-----KLHSLPT-GEIGINQKGFVSEIT 828
G VL T G GT K ++ +G AVK K+ SL G+I K + +
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI----KREIQNLK 66
Query: 829 EIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANA 888
RH +I+K Y S F+V EY+ G L + E++ + + + + +A
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---LFQQILSA 123
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAP 948
+ Y H ++HRD+ + VLLD A ++DFG + + D + G+ Y AP
Sbjct: 124 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAP 179
Query: 949 E-LAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E ++ + A + D+++ GV++ ++ G P
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSL-PTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
G+G GTVYK + GD AVK L + PT E + V+ + + RH NI+ F G+ +
Sbjct: 45 GSGSFGTVYKGKW-HGDV-AVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
+L +V ++ E SL L + T ++ + +++ + A + Y+H I+HR
Sbjct: 103 -KDNLAIVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLHAKN---IIHR 156
Query: 904 DISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS------ELAGTCGYIAPELAYTMRAN 957
D+ S + L + DFG A S WS + G+ ++APE+ N
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATV----KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 958 E---KCDVFNFGVLVLEVIEGKHP 978
+ DV+++G+++ E++ G+ P
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V + ++ H NI+K Y F + +LV E G L + + +E+D ++ +I+
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIR 139
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYK---AHVSDFGTAKFLKPDSSNWSELA 940
V + ++YMH + I+HRD+ + +LL+ + K + DFG + + S +
Sbjct: 140 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKI 195
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT YIAPE+ + +EKCDV++ GV++ ++ G P
Sbjct: 196 GTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPP 232
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant)
In Complex With N6-Benzyl Adp
Length = 452
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 31/262 (11%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G G V+ A+K L Q+ V + ++RH +V+ Y S
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQV--MKKLRHEKLVQLYAVVSE 250
Query: 845 TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRD 904
+ +++V EY+ +GSL L E T L + V++ +A+ ++Y+ + +HRD
Sbjct: 251 -EPIYIVGEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 305
Query: 905 ISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKCDVF 963
+ + +L+ V+DFG A+ ++ + + A + APE A R K DV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 964 NFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLPPPLGEVEEKL 1018
+FG+L+ E+ +G+ +PG +N V D ++ R+P P E E L
Sbjct: 366 SFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCP-PECPESL 410
Query: 1019 KSMIAVAFLCLDANPDCRPTMQ 1040
++ C P+ RPT +
Sbjct: 411 HDLMC---QCWRKEPEERPTFE 429
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 120/270 (44%), Gaps = 27/270 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L R + + +L G ++ F+ E + + H NI+ G
Sbjct: 31 GAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEG 90
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ ++ + +V EY+E GSL T L + + + V +++G++ + Y+ +
Sbjct: 91 VVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQLVGMLRGISAGMKYLSDMGY--- 145
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGTCG--YIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + APE +
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFT 205
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLP P+ +
Sbjct: 206 SASDVWSYGIVMWEVVSYGERP----------YWEMTNQDVIKAVEEGYRLPSPM----D 251
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
++ + C + RP ++ N+L
Sbjct: 252 CPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G G G VY A E S A+K L + G+ + EI + H NI++ Y
Sbjct: 32 GKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQ-LRREIEIQAHLHHPNILRLYN 90
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ + ++L+ EY RG L L T D + +++ +A+AL Y H +
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCT---FDEQRTATIMEELADALMYCHGK---KV 144
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
+HRDI + +LL L+ + ++DFG + + S + GT Y+ PE+ NEK
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 961 DVFNFGVLVLEVIEGKHP 978
D++ GVL E++ G P
Sbjct: 203 DLWCIGVLCYELLVGNPP 220
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
GTG G V + A+K + E +++ F+ E + + H +V+ YG
Sbjct: 18 GTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
C+ + +F++ EY+ G L L + + + K V A+ Y+ F L
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 127
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPD---SSNWSELAGTCGYIAPELAYTMRANE 958
HRD++++ L++ + VSDFG ++++ D SS S+ + PE+ + +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFP--VRWSPPEVLMYSKFSS 185
Query: 959 KCDVFNFGVLVLEVIE-GKHP 978
K D++ FGVL+ E+ GK P
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMP 206
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 124/302 (41%), Gaps = 48/302 (15%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR--AVKKLH------SLPTGEI----GI 818
L AS FE VL G G G V KA + D+R A+KK+ S E+ +
Sbjct: 2 LRYASDFEEIAVL-GQGAFGQVVKAR-NALDSRYYAIKKIRHTEEKLSTILSEVMLLASL 59
Query: 819 NQKGFVSEITE-IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK 877
N + V + RN VK LF+ EY E +L ++ +E + D
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 878 RVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK-------FLK 930
R+ + + ALSY+H I+HRD+ + +D + DFG AK LK
Sbjct: 120 RL--FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 931 PD-------SSNWSELAGTCGYIAPE-LAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFX 982
D S N + GT Y+A E L T NEK D+++ G++ E+I +P
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTG 231
Query: 983 XXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+++I PP + K+K + L +D +P+ RP + +
Sbjct: 232 MERVNILKKLRSVSI--------EFPPDFD--DNKMKVEKKIIRLLIDHDPNKRPGARTL 281
Query: 1043 CN 1044
N
Sbjct: 282 LN 283
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLH----SLPTGEIGINQKGFVSEITEIRHRNIVKFY 839
G+G G V+ E +SG R +K ++ +P +I + + + + H NI+K +
Sbjct: 31 GSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQI----EAEIEVLKSLDHPNIIKIF 86
Query: 840 GFCSHTQHLFLVYEYLERGS-LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFP 898
++++V E E G L I+S +A L ++K + NAL+Y H
Sbjct: 87 EVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ--- 143
Query: 899 PILHRDISSKKVLLDLEYKAH----VSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
++H+D+ + +L + H + DFG A+ K D + + AGT Y+APE+ +
Sbjct: 144 HVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPEV-FKR 200
Query: 955 RANEKCDVFNFGVLVLEVIEGKHP 978
KCD+++ GV++ ++ G P
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 28/214 (13%)
Query: 779 GKMVLHGTGGCGTVYKAEL----TSGDTRAVK-----KLHSLPT-GEIGINQKGFVSEIT 828
G VL T G GT K ++ +G AVK K+ SL G+I K + +
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI----KREIQNLK 66
Query: 829 EIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANA 888
RH +I+K Y S F+V EY+ G L + E++ + + + + +A
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---LFQQILSA 123
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG---Y 945
+ Y H ++HRD+ + VLLD A ++DFG + + S+ L +CG Y
Sbjct: 124 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLRTSCGSPNY 176
Query: 946 IAPE-LAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
APE ++ + A + D+++ GV++ ++ G P
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 20 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E T L + V++ +A+ ++Y+ + +
Sbjct: 75 VSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---V 129
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 233
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C P+ RPT +
Sbjct: 234 PESLHDLMC---QCWRKEPEERPTFE 256
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
GTG G V + A+K + E +++ F+ E + + H +V+ YG
Sbjct: 24 GTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
C+ + +F++ EY+ G L L + + + K V A+ Y+ F L
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 133
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRANE 958
HRD++++ L++ + VSDFG ++++ D ++ G+ + PE+ + +
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 959 KCDVFNFGVLVLEVIE-GKHP 978
K D++ FGVL+ E+ GK P
Sbjct: 192 KSDIWAFGVLMWEIYSLGKMP 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
GTG G V + A+K + E +++ F+ E + + H +V+ YG
Sbjct: 17 GTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
C+ + +F++ EY+ G L L + + + K V A+ Y+ F L
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 126
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRANE 958
HRD++++ L++ + VSDFG ++++ D ++ G+ + PE+ + +
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 959 KCDVFNFGVLVLEVIE-GKHP 978
K D++ FGVL+ E+ GK P
Sbjct: 185 KSDIWAFGVLMWEIYSLGKMP 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
GTG G V + A+K + E +++ F+ E + + H +V+ YG
Sbjct: 18 GTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
C+ + +F++ EY+ G L L + + + K V A+ Y+ F L
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 127
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRANE 958
HRD++++ L++ + VSDFG ++++ D ++ G+ + PE+ + +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 959 KCDVFNFGVLVLEVIE-GKHP 978
K D++ FGVL+ E+ GK P
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMP 206
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
GTG G V + A+K + E +++ F+ E + + H +V+ YG
Sbjct: 33 GTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
C+ + +F++ EY+ G L L + + + K V A+ Y+ F L
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 142
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRANE 958
HRD++++ L++ + VSDFG ++++ D S G+ + PE+ + +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSS--VGSKFPVRWSPPEVLMYSKFSS 200
Query: 959 KCDVFNFGVLVLEVIE-GKHP 978
K D++ FGVL+ E+ GK P
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMP 221
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
GTG G V + A+K + E +++ F+ E + + H +V+ YG
Sbjct: 33 GTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
C+ + +F++ EY+ G L L + + + K V A+ Y+ F L
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 142
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRANE 958
HRD++++ L++ + VSDFG ++++ D ++ G+ + PE+ + +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 959 KCDVFNFGVLVLEVIE-GKHP 978
K D++ FGVL+ E+ GK P
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMP 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
GTG G V + A+K + E +++ F+ E + + H +V+ YG
Sbjct: 13 GTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
C+ + +F++ EY+ G L L + + + K V A+ Y+ F L
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 122
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPELAYTMRANE 958
HRD++++ L++ + VSDFG ++++ D ++ G+ + PE+ + +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 959 KCDVFNFGVLVLEVIE-GKHP 978
K D++ FGVL+ E+ GK P
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMP 201
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 61/204 (29%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 160 SPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKN-Q 218
S + LH N S V S +NLT ++L++N + G + L L L L+ N Q
Sbjct: 32 SSQRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQ 91
Query: 219 LSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNL 278
L P T L +L L+L L P +L YLYL N L ++F +L
Sbjct: 92 LRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDL 151
Query: 279 SSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIREN 338
+L HL +H N++ L SL L L + ++ P + +L + LY+ N
Sbjct: 152 GNLTHLFLHG-NRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFAN 210
Query: 339 MLYGSIPEELGRLKSLSQLSLSVN 362
L E L L+SL L L+ N
Sbjct: 211 NLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Query: 236 LYLHDNRLSGYIP-PKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSG 294
++LH NR+S Y+P S ++L L+L N L G ++F L+ L+ L + + +L
Sbjct: 36 IFLHGNRIS-YVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRV 94
Query: 295 SIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGR-LKS 353
P L L L L + L P L+ ++ LY+++N L ++P+ R L +
Sbjct: 95 VDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ-ALPDNTFRDLGN 153
Query: 354 LSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFT 413
L+ L L N++ H L +L L +N ++ P ++ +L LF N +
Sbjct: 154 LTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS 213
Query: 414 GYLPQNVCQSGSLTHFSVRNNNFV 437
+ + SL + + +N +V
Sbjct: 214 MLPAEVLVPLRSLQYLRLNDNPWV 237
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf
12058
Length = 285
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 118/273 (43%), Gaps = 33/273 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAV-KKLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L R + + +L G ++ F+SE + + H NI+ G
Sbjct: 17 GVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEG 76
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ + + ++ EY+E GSL L + V +++G+ + + Y+ +
Sbjct: 77 VVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY--- 131
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGTCG--YIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + APE +
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 191
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP
Sbjct: 192 SASDVWSYGIVMWEVMSYGERP----------YWDMSNQDVIKAIEEGYRLPPP------ 235
Query: 1017 KLKSMIAVAFLCLDA---NPDCRPTMQKVCNLL 1046
+ IA+ L LD RP ++ N+L
Sbjct: 236 -MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 118/273 (43%), Gaps = 33/273 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAV-KKLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L R + + +L G ++ F+SE + + H NI+ G
Sbjct: 23 GVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEG 82
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ + + ++ EY+E GSL L + V +++G+ + + Y+ +
Sbjct: 83 VVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY--- 137
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGTCG--YIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + APE +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 197
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP
Sbjct: 198 SASDVWSYGIVMWEVMSYGERP----------YWDMSNQDVIKAIEEGYRLPPP------ 241
Query: 1017 KLKSMIAVAFLCLDA---NPDCRPTMQKVCNLL 1046
+ IA+ L LD RP ++ N+L
Sbjct: 242 -MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 24 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E T L + V++ +A+ ++Y+ + +
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVERMNY---V 133
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 237
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C P+ RPT +
Sbjct: 238 PESLHDLMC---QCWRKEPEERPTFE 260
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 19/221 (8%)
Query: 766 VNNQELLSASTFEGKMVLHGTGGCGTVY--KAELTSGDTRAVKKLHSLPTGEIGINQKGF 823
V + + + ++G+ VL G G G V K ++T G AVK + + +++
Sbjct: 17 VQHSTAIFSDRYKGQRVL-GKGSFGEVILCKDKIT-GQECAVKVISKRQVKQ-KTDKESL 73
Query: 824 VSEI---TEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN 880
+ E+ ++ H NI+K Y F + +LV E G L + + +E+D ++
Sbjct: 74 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 130
Query: 881 VIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWS 937
+I+ V + ++YMH + I+HRD+ + +LL+ + K + DFG + + S
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMK 186
Query: 938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT YIAPE+ + +EKCDV++ GV++ ++ G P
Sbjct: 187 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
Length = 286
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + +IRH +V+ Y
Sbjct: 27 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E L + V++ +A+ ++Y+ + +
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 240
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C +P+ RPT +
Sbjct: 241 PESLHDLMC---QCWRKDPEERPTFE 263
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 828 TEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVAN 887
+ +RH NI++ Y + + ++L+ E+ RG L L D + ++ +A+
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELAD 125
Query: 888 ALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIA 947
AL Y H ++HRDI + +L+ + + ++DFG + + S + GT Y+
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLP 180
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
PE+ +EK D++ GVL E + G P
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 828 TEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVAN 887
+ +RH NI++ Y + + ++L+ E+ RG L L D + ++ +A+
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELAD 125
Query: 888 ALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIA 947
AL Y H ++HRDI + +L+ + + ++DFG + + S + GT Y+
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLP 180
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
PE+ +EK D++ GVL E + G P
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSL----PTGEIGINQK--GFVSEI---TEIRHRNI 835
G GG G V+K L ++V + SL GE + +K F E+ + + H NI
Sbjct: 28 GKGGFGLVHKGRLVK--DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 836 VKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHD 895
VK YG + + V E++ G L L ++A + WS ++ ++ +A + YM +
Sbjct: 86 VKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQNQ 141
Query: 896 CFPPILHRDISSKKVLL-----DLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPEL 950
PPI+HRD+ S + L + A V+DFGT+ + + S L G ++APE
Sbjct: 142 N-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---QQSVHSVSGLLGNFQWMAPET 197
Query: 951 --AYTMRANEKCDVFNFGVLVLEVIEGKHP 978
A EK D ++F +++ ++ G+ P
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 828 TEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVAN 887
+ +RH NI++ Y + + ++L+ E+ RG L L D + ++ +A+
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELAD 126
Query: 888 ALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIA 947
AL Y H ++HRDI + +L+ + + ++DFG + + S + GT Y+
Sbjct: 127 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLP 181
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
PE+ +EK D++ GVL E + G P
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 126/266 (47%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 27 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E L + V++ +A+ ++Y+ + +
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+++ +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 240
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C +P+ RPT +
Sbjct: 241 PESLHDLMC---QCWRKDPEERPTFE 263
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 19/221 (8%)
Query: 766 VNNQELLSASTFEGKMVLHGTGGCGTVY--KAELTSGDTRAVKKLHSLPTGEIGINQKGF 823
V + + + ++G+ VL G G G V K ++T G AVK + + +++
Sbjct: 40 VQHSTAIFSDRYKGQRVL-GKGSFGEVILCKDKIT-GQECAVKVISKRQVKQ-KTDKESL 96
Query: 824 VSEI---TEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN 880
+ E+ ++ H NI+K Y F + +LV E G L + + +E+D ++
Sbjct: 97 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 153
Query: 881 VIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWS 937
+I+ V + ++YMH + I+HRD+ + +LL+ + K + DFG + + S
Sbjct: 154 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMK 209
Query: 938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT YIAPE+ + +EKCDV++ GV++ ++ G P
Sbjct: 210 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 19/221 (8%)
Query: 766 VNNQELLSASTFEGKMVLHGTGGCGTVY--KAELTSGDTRAVKKLHSLPTGEIGINQKGF 823
V + + + ++G+ VL G G G V K ++T G AVK + + +++
Sbjct: 41 VQHSTAIFSDRYKGQRVL-GKGSFGEVILCKDKIT-GQECAVKVISKRQVKQ-KTDKESL 97
Query: 824 VSEI---TEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN 880
+ E+ ++ H NI+K Y F + +LV E G L + + +E+D ++
Sbjct: 98 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 154
Query: 881 VIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWS 937
+I+ V + ++YMH + I+HRD+ + +LL+ + K + DFG + + S
Sbjct: 155 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMK 210
Query: 938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT YIAPE+ + +EKCDV++ GV++ ++ G P
Sbjct: 211 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 19/217 (8%)
Query: 772 LSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI 830
L FE +L G G G V+ AE + A+K L ++ + + E
Sbjct: 15 LKIEDFELHKML-GKGSFGKVFLAEFKKTNQFFAIKALKK----DVVLMDDDVECTMVEK 69
Query: 831 RHRNIVKFYGFCSH-------TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
R ++ + F +H ++LF V EYL G L + + + + D S+
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAA 126
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTC 943
+ L ++H I++RD+ +LLD + ++DFG K + +E GT
Sbjct: 127 EIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTP 183
Query: 944 GYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGH 980
YIAPE+ + N D ++FGVL+ E++ G+ P H
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 27 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E L + V++ +A+ ++Y+ + +
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 240
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C +P+ RPT +
Sbjct: 241 PESLHDLMC---QCWRKDPEERPTFE 263
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQK--GFVSEITEIRHRNIVKFYGF 841
G G VY+AE + +G A+K + + G+ Q+ V +++H +I++ Y +
Sbjct: 20 GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY 79
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ +++LV E G + L N + ++ + + + + Y+H IL
Sbjct: 80 FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFMHQIITGMLYLHSH---GIL 134
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
HRD++ +LL ++DFG A LK L GT YI+PE+A + D
Sbjct: 135 HRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESD 194
Query: 962 VFNFGVLVLEVIEGKHP 978
V++ G + ++ G+ P
Sbjct: 195 VWSLGCMFYTLLIGRPP 211
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1)
Length = 294
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 24/260 (9%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
G G G VYK + + + A+K + + + + ++ +++ I +++G
Sbjct: 28 GKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYL 87
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
+ L+++ EYL GS +L L+ + +++ + L Y+H + +HR
Sbjct: 88 KSTKLWIIMEYLGGGSALDLLK----PGPLEETYIATILREILKGLDYLHSE---RKIHR 140
Query: 904 DISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVF 963
DI + VLL + ++DFG A L + GT ++APE+ + K D++
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIW 200
Query: 964 NFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPL-GEVEEKLKSMI 1022
+ G+ +E+ +G+ P M ++ LI PP L G+ + K +
Sbjct: 201 SLGITAIELAKGEPPN----------SDLHPMRVLF--LIPKNSPPTLEGQHSKPFKEFV 248
Query: 1023 AVAFLCLDANPDCRPTMQKV 1042
CL+ +P RPT +++
Sbjct: 249 EA---CLNKDPRFRPTAKEL 265
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSL----------ATILSNEATAAELDWS 876
+T ++H +IVKFYG C L +V+EY++ G L A +++ EL S
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ +++ + +A + Y+ F +HRD++++ L+ + DFG ++ + S+++
Sbjct: 129 QMLHIAQQIAAGMVYLASQHF---VHRDLATRNCLVGENLLVKIGDFGMSRDVY--STDY 183
Query: 937 SELAG----TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ G ++ PE + + DV++ GV++ E+ GK P
Sbjct: 184 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 777 FEGKMVLHGTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGFVSEIT---EIRH 832
FE K L GTG V AE +G AVK +P + + +EI +I+H
Sbjct: 24 FEFKETL-GTGAFSEVVLAEEKATGKLFAVK---CIPKKALKGKESSIENEIAVLRKIKH 79
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYM 892
NIV HL+LV + + G L + + E D S +I+ V +A+ Y+
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS---TLIRQVLDAVYYL 136
Query: 893 HHDCFPPILHRDISSKKVLL---DLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE 949
H I+HRD+ + +L D E K +SDFG +K ++ S GT GY+APE
Sbjct: 137 HR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTPGYVAPE 192
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ ++ D ++ GV+ ++ G P
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 123/265 (46%), Gaps = 37/265 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G ++ + F+ E + ++RH +V+ Y
Sbjct: 194 GQGCFGEVWMGTW-NGTTRVAIK--TLKPG--NMSPEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E L + V++ +A+ ++Y+ + +
Sbjct: 249 VSE-EPIYIVTEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNY---V 303
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG + ++ + + A + APE A R K
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLPPPLGEVE 1015
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P P E
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCP-PECP 408
Query: 1016 EKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C +P+ RPT +
Sbjct: 409 ESLHDLMC---QCWRKDPEERPTFE 430
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 27 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E L + V++ +A+ ++Y+ + +
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 240
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C +P+ RPT +
Sbjct: 241 PESLHDLMC---QCWRKDPEERPTFE 263
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 17 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + + +V EY+ +GSL L E T L + V++ +A+ ++Y+ + +
Sbjct: 72 VSE-EPIXIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---V 126
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 230
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C P+ RPT +
Sbjct: 231 PESLHDLMC---QCWRKEPEERPTFE 253
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
Length = 275
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 16 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E L + V++ +A+ ++Y+ + +
Sbjct: 71 VSE-EPIYIVTEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNY---V 125
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 229
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C +P+ RPT +
Sbjct: 230 PESLHDLMC---QCWRKDPEERPTFE 252
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 18 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E L + V++ +A+ ++Y+ + +
Sbjct: 73 VSE-EPIYIVTEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNY---V 127
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 231
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C +P+ RPT +
Sbjct: 232 PESLHDLMC---QCWRKDPEERPTFE 254
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 27 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E L + V++ +A+ ++Y+ + +
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 240
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C +P+ RPT +
Sbjct: 241 PESLHDLMC---QCWRKDPEERPTFE 263
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 33/273 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAV-KKLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKFYG 840
G G G V L R + + +L G ++ F+SE + + H NI+ G
Sbjct: 38 GVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEG 97
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ + + ++ EY+E GSL L + V +++G+ + + Y+
Sbjct: 98 VVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSA 152
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-SSNWSELAGTCG--YIAPELAYTMRAN 957
+HRD++++ +L++ VSDFG ++ L+ D + ++ G + APE +
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 212
Query: 958 EKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV+++G+++ EV+ G+ P N +++ RLPPP
Sbjct: 213 SASDVWSYGIVMWEVMSYGERP----------YWDMSNQDVIKAIEEGYRLPPP------ 256
Query: 1017 KLKSMIAVAFLCLDA---NPDCRPTMQKVCNLL 1046
+ IA+ L LD RP ++ N+L
Sbjct: 257 -MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 37 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 92
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 149
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A++ D++ G ++ +++ G P
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 27 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L E L + V++ +A+ ++Y+ + +
Sbjct: 82 VSE-EPIYIVCEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 240
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C +P+ RPT +
Sbjct: 241 PESLHDLMC---QCWRKDPEERPTFE 263
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 37 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 92
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 149
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 68/242 (28%), Positives = 106/242 (43%), Gaps = 46/242 (19%)
Query: 759 SQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIG 817
+ E D++N +LL L G G G VYK L D R V K+ S +
Sbjct: 5 ASEPSLDLDNLKLLE---------LIGRGRYGAVYKGSL---DERPVAVKVFSFANRQNF 52
Query: 818 INQKGFVSEITEIRHRNIVKFYG-----FCSHTQHLFLVYEYLERGSLATILSNEATAAE 872
IN+K + + + H NI +F LV EY GSL LS +
Sbjct: 53 INEKN-IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--- 108
Query: 873 LDWSKRVNVIKGVANALSYMHHDC------FPPILHRDISSKKVLLDLEYKAHVSDFGTA 926
DW + V L+Y+H + P I HRD++S+ VL+ + +SDFG +
Sbjct: 109 -DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
Query: 927 ------KFLKP---DSSNWSELAGTCGYIAPEL---AYTMRANE----KCDVFNFGVLVL 970
+ ++P D++ SE+ GT Y+APE+ A +R E + D++ G++
Sbjct: 168 MRLTGNRLVRPGEEDNAAISEV-GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYW 226
Query: 971 EV 972
E+
Sbjct: 227 EI 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 38 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 93
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 150
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 151 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 34 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 89
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 146
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 147 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 268 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 378
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HR+++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 435
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 436 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 482
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 483 CPEKVYELMRA----CWQWNPSDRPSFAEI 508
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGFC 842
G G G VYKA+ + G A+K++ L + GI +S + E+ H NIV
Sbjct: 30 GEGTYGVVYKAKDSQGRIVALKRIR-LDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 843 SHTQHLFLVYEYLERGSLATILSNEATAAELDWSK--RVNVIKGVANALSYMHHDCFPPI 900
+ L LV+E++E+ L +L T + K +++GVA+ + H I
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC--HQHR-----I 140
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LAYTMRANEK 959
LHRD+ + +L++ + ++DFG A+ +++ T Y AP+ L + + +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 960 CDVFNFGVLVLEVIEGK 976
D+++ G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 27 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 137
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 194
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 241
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 242 CPEKVYELMRA----CWQWNPSDRPSFAEI 267
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 226 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 336
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HR+++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 393
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 440
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 441 CPEKVYELMRA----CWQWNPSDRPSFAEI 466
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSL----PTGEIGINQK--GFVSEI---TEIRHRNI 835
G GG G V+K L ++V + SL GE + +K F E+ + + H NI
Sbjct: 28 GKGGFGLVHKGRLVK--DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 836 VKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHD 895
VK YG + + V E++ G L L ++A + WS ++ ++ +A + YM +
Sbjct: 86 VKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQNQ 141
Query: 896 CFPPILHRDISSKKVLL-----DLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPEL 950
PPI+HRD+ S + L + A V+DFG + + + S L G ++APE
Sbjct: 142 N-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQSVHSVSGLLGNFQWMAPET 197
Query: 951 --AYTMRANEKCDVFNFGVLVLEVIEGKHP 978
A EK D ++F +++ ++ G+ P
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 42 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 97
Query: 834 NIVKFYGFC-SHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYM 892
VK Y FC + L+ Y + G L + D + + +AL Y+
Sbjct: 98 FFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 153
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPEL 950
H I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 154 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 951 AYTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGFC 842
G G G VYKA+ + G A+K++ L + GI +S + E+ H NIV
Sbjct: 30 GEGTYGVVYKAKDSQGRIVALKRIR-LDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 843 SHTQHLFLVYEYLERGSLATILSNEATAAELDWSK--RVNVIKGVANALSYMHHDCFPPI 900
+ L LV+E++E+ L +L T + K +++GVA+ + H I
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC--HQHR-----I 140
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LAYTMRANEK 959
LHRD+ + +L++ + ++DFG A+ +++ T Y AP+ L + + +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 960 CDVFNFGVLVLEVIEGK 976
D+++ G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dp- 987
Length = 277
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 27 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 137
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 194
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 241
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 242 CPEKVYELMRA----CWQWNPSDRPSFAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 35 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 145
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 202
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 249
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 250 CPEKVYELMRA----CWQWNPSDRPSFAEI 275
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
Length = 293
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 27 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 137
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 194
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 241
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 242 CPEKVYELMRA----CWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 22 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 132
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 189
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 236
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 237 CPEKVYELMRA----CWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 26 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 136
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 193
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 240
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 241 CPEKVYELMRA----CWQWNPSDRPSFAEI 266
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 22 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 132
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 189
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 236
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 237 CPEKVYELMRA----CWQWNPSDRPSFAEI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 24 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 134
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 191
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 238
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 239 CPEKVYELMRA----CWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 24 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 134
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 191
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 238
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 239 CPEKVYELMRA----CWQWNPSDRPSFAEI 264
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 124/302 (41%), Gaps = 48/302 (15%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR--AVKKLH------SLPTGEI----GI 818
L AS FE VL G G G V KA + D+R A+KK+ S E+ +
Sbjct: 2 LRYASDFEEIAVL-GQGAFGQVVKAR-NALDSRYYAIKKIRHTEEKLSTILSEVXLLASL 59
Query: 819 NQKGFVSEITE-IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK 877
N + V + RN VK LF+ EY E +L ++ +E + D
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 878 RVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK-------FLK 930
R+ + + ALSY+H I+HR++ + +D + DFG AK LK
Sbjct: 120 RL--FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 931 PD-------SSNWSELAGTCGYIAPE-LAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFX 982
D S N + GT Y+A E L T NEK D ++ G++ E I +P
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTG 231
Query: 983 XXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+++I PP + + K++ I L +D +P+ RP + +
Sbjct: 232 XERVNILKKLRSVSI--------EFPPDFDDNKXKVEKKIIR--LLIDHDPNKRPGARTL 281
Query: 1043 CN 1044
N
Sbjct: 282 LN 283
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl
Mutant In Complex With The Aurora Kinase Inhibitor Vx-680
Length = 287
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 23 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 133
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPESLAYN-KF 190
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 237
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 238 CPEKVYELMRA----CWQWNPSDRPSFAEI 263
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 14/194 (7%)
Query: 791 TVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHRNIVKFYGFCSHTQ 846
TV EL + A+K L I N+ +V+ ++ + H VK Y +
Sbjct: 46 TVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 103
Query: 847 HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDIS 906
L+ Y + G L + D + + +AL Y+H I+HRD+
Sbjct: 104 KLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLK 157
Query: 907 SKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELAYTMRANEKCDVFN 964
+ +LL+ + ++DFGTAK L P+S + + GT Y++PEL A + D++
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 217
Query: 965 FGVLVLEVIEGKHP 978
G ++ +++ G P
Sbjct: 218 LGCIIYQLVAGLPP 231
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+ H NI+K Y F ++ +LV E + G L + + E+D + +IK V + +
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAA---VIIKQVLSGV 149
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWSELAGTCGYI 946
+Y+H I+HRD+ + +LL+ + K + DFG + + + E GT YI
Sbjct: 150 TYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERLGTAYYI 205
Query: 947 APELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
APE+ + +EKCDV++ GV++ ++ G P
Sbjct: 206 APEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 24 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 134
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPESLAYN-KF 191
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 238
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 239 CPEKVYELMRA----CWQWNPSDRPSFAEI 264
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 37 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 92
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 149
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 12 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 67
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 124
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 125 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 35 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 90
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 147
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 148 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 14 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 69
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 126
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 127 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 184 TEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 37 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 92
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 149
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 13 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 68
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 125
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 126 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 35 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 90
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 147
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 148 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 37 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 92
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 149
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 19 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 74
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 131
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 132 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 34 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 89
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 146
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 147 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 38 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 93
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 150
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 151 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 37 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 92
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 149
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 15 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 70
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 127
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 128 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 185 TEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 40 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 95
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 152
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 153 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 779 GKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHR 833
GK++ G G TV A EL + A+K L I N+ +V+ ++ + H
Sbjct: 35 GKIL--GEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHP 90
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
VK Y + L+ Y + G L + D + + +AL Y+H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH 147
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELA 951
I+HRD+ + +LL+ + ++DFGTAK L P+S + + GT Y++PEL
Sbjct: 148 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
A + D++ G ++ +++ G P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 27 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +G L L E L + V++ +A+ ++Y+ + +
Sbjct: 82 VSE-EPIYIVMEYMSKGCLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 240
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C +P+ RPT +
Sbjct: 241 PESLHDLMC---QCWRKDPEERPTFE 263
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 22 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E+ + + +++A+ Y+ F
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNF--- 132
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 189
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 236
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 237 CPEKVYELMRA----CWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 22 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E+ + + +++A+ Y+ F
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNF--- 132
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 189
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 236
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 237 CPEKVYELMRA----CWQWNPSDRPSFAEI 262
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 39/266 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ +G TR K +L G + + + F+ E + ++RH +V+ Y
Sbjct: 27 GQGCFGEVWMGTW-NGTTRVAIK--TLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +G L L E L + V++ +A+ ++Y+ + +
Sbjct: 82 VSE-EPIYIVTEYMSKGCLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ V+DFG A+ ++ + + A + APE A R K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 961 DVFNFGVLVLEV-IEGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDS--RLP-PPLGEV 1014
DV++FG+L+ E+ +G+ +PG +N V D ++ R+P PP E
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM--------------VNREVLDQVERGYRMPCPP--EC 240
Query: 1015 EEKLKSMIAVAFLCLDANPDCRPTMQ 1040
E L ++ C +P+ RPT +
Sbjct: 241 PESLHDLMC---QCWRKDPEERPTFE 263
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 841 FCSHT--QHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFP 898
FC+ ++LF V EYL G L + + + + D S+ + L ++H
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFLHSK--- 137
Query: 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
I++RD+ +LLD + ++DFG K + + GT YIAPE+ + N
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNH 197
Query: 959 KCDVFNFGVLVLEVIEGKHPGH 980
D ++FGVL+ E++ G+ P H
Sbjct: 198 SVDWWSFGVLLYEMLIGQSPFH 219
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out
Inhibitor Ap24534
Length = 284
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 22 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E+ + + +++A+ Y+ F
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNF--- 132
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 189
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 236
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 237 CPEKVYELMRA----CWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 22 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E+ + + +++A+ Y+ F
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNF--- 132
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 189
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 236
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 237 CPEKVYELMRA----CWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
Length = 293
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 27 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E+ + + +++A+ Y+ F
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNF--- 137
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 194
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 241
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 242 CPEKVYELMRA----CWQWNPSDRPSFAEI 267
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 28/224 (12%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATA-----AELDWSKR 878
V+ + ++H NIV++ L++V +Y E G L ++ + LDW +
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ 133
Query: 879 VNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ + AL ++H ILHRDI S+ + L + + DFG A+ L
Sbjct: 134 ICL------ALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA 184
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIV 998
GT Y++PE+ N K D++ G ++ E+ KH +M +
Sbjct: 185 CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH-----------AFEAGSMKNL 233
Query: 999 VNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
V +I PP L+S+++ F NP RP++ +
Sbjct: 234 VLKIISGSFPPVSLHYSYDLRSLVSQLF---KRNPRDRPSVNSI 274
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 229 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E+ + + +++A+ Y+ F
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNF--- 339
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HR+++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KF 396
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 443
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 444 CPEKVYELMRA----CWQWNPSDRPSFAEI 469
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 41 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 96
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L +A A +D K + + + Y+ + +HRD++++ +L++
Sbjct: 97 YLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 151
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + APE + + DV++FGV++
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 971 EVI 973
E+
Sbjct: 212 ELF 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 779 GKMVLHGTGGCGT-----VYKAELTSGDTRAVKKLHSLPTGEIGI--NQKGFVSEITEIR 831
G +L T G GT V K ELT G AVK L+ + + + + + R
Sbjct: 16 GHYILGDTLGVGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSY 891
H +I+K Y S +F+V EY+ G L + LD + + + + + + Y
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDY 131
Query: 892 MHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG---YIAP 948
H ++HRD+ + VLLD A ++DFG + + S+ L +CG Y AP
Sbjct: 132 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLRXSCGSPNYAAP 184
Query: 949 E-LAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E ++ + A + D+++ GV++ ++ G P
Sbjct: 185 EVISGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVS-EIT---EIRHRNIVKFY 839
G GG + E++ DT+ V +P + +Q+ +S EI+ + H+++V F+
Sbjct: 26 GKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 840 GFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
GF +F+V E R SL + E + ++ + Y+H +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---R 137
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
++HRD+ + L+ + + + DFG A ++ D L GT YIAPE+ + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 960 CDVFNFGVLVLEVIEGKHP 978
DV++ G ++ ++ GK P
Sbjct: 198 VDVWSIGCIMYTLLVGKPP 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 826 EITEIR----HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNV 881
EIT ++ H NIVK + H FLV E L G L + + +E + S +
Sbjct: 55 EITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEAS---YI 111
Query: 882 IKGVANALSYMHHDCFPPILHRDISSKKVLL-----DLEYKAHVSDFGTAKFLKPDSSNW 936
++ + +A+S+MH ++HRD+ + +L +LE K + DFG A+ PD+
Sbjct: 112 MRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIK--IIDFGFARLKPPDNQPL 166
Query: 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
T Y APEL +E CD+++ GV++ ++ G+ P
Sbjct: 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 23 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 133
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ + AG + APE LAY +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYN-KF 190
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 237
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 238 CPEKVYELMRA----CWQWNPSDRPSFAEI 263
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVS-EIT---EIRHRNIVKFY 839
G GG + E++ DT+ V +P + +Q+ +S EI+ + H+++V F+
Sbjct: 26 GKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 840 GFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
GF +F+V E R SL + E + ++ + Y+H +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---R 137
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
++HRD+ + L+ + + + DFG A ++ D L GT YIAPE+ + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 960 CDVFNFGVLVLEVIEGKHP 978
DV++ G ++ ++ GK P
Sbjct: 198 VDVWSIGCIMYTLLVGKPP 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVS-EIT---EIRHRNIVKFY 839
G GG + E++ DT+ V +P + +Q+ +S EI+ + H+++V F+
Sbjct: 30 GKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 840 GFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
GF +F+V E R SL + E + ++ + Y+H +
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---R 141
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
++HRD+ + L+ + + + DFG A ++ D L GT YIAPE+ + +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 960 CDVFNFGVLVLEVIEGKHP 978
DV++ G ++ ++ GK P
Sbjct: 202 VDVWSIGCIMYTLLVGKPP 220
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 41/270 (15%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 27 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E++ + + +++A+ Y+ F
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNF--- 137
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ + AG + APE LAY +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYN-KF 194
Query: 957 NEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDL-IDSRLPPPLG 1012
+ K DV+ FGVL+ E+ +PG +++ V L D R+ P G
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPG-------------IDLSQVYELLEKDYRMERPEG 241
Query: 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
E+ + M A C NP RP+ ++
Sbjct: 242 CPEKVYELMRA----CWQWNPSDRPSFAEI 267
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 800 GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQH-LFLVYEYLERG 858
G+ AVK + + T + + + S +T++RH N+V+ G + L++V EY+ +G
Sbjct: 29 GNKVAVKCIKNDATAQAFLAE---ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 85
Query: 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA 918
SL L + + L + V A+ Y+ + F +HRD++++ VL+ + A
Sbjct: 86 SLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVA 141
Query: 919 HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
VSDFG K SS + APE + + K DV++FG+L+ E+
Sbjct: 142 KVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 800 GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQH-LFLVYEYLERG 858
G+ AVK + + T + + + S +T++RH N+V+ G + L++V EY+ +G
Sbjct: 44 GNKVAVKCIKNDATAQAFLAE---ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 100
Query: 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA 918
SL L + + L + V A+ Y+ + F +HRD++++ VL+ + A
Sbjct: 101 SLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVA 156
Query: 919 HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
VSDFG K SS + APE + + K DV++FG+L+ E+
Sbjct: 157 KVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Query: 785 GTGGCGTVYKAELTSGDT-RAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G V+ L + +T AVK ++ + F+ E + + H NIV+ G
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL---KAKFLQEARILKQYSHPNIVRLIG 179
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ Q +++V E ++ G T L E A L + ++ A + Y+ C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-----TCGYIAPELAYTMR 955
+HRD++++ L+ + +SDFG + + ++ +G + APE R
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMS---REEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 956 ANEKCDVFNFGVLVLEVI 973
+ + DV++FG+L+ E
Sbjct: 292 YSSESDVWSFGILLWETF 309
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 824 VSEITEIRHRNIVKFYGF----CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRV 879
V + ++H NI++F G S L+L+ + E+GSL+ L A + W++
Sbjct: 69 VYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK----ANVVSWNELC 124
Query: 880 NVIKGVANALSYMHHDC-------FPPILHRDISSKKVLLDLEYKAHVSDFGTA-KFLKP 931
++ + +A L+Y+H D P I HRDI SK VLL A ++DFG A KF
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 932 DSSNWSE-LAGTCGYIAPE-----LAYTMRANEKCDVFNFGVLVLEV 972
S+ + GT Y+APE + + A + D++ G+++ E+
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVS-EIT---EIRHRNIVKFY 839
G GG + E++ DT+ V +P + +Q+ +S EI+ + H+++V F+
Sbjct: 50 GKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 840 GFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
GF +F+V E R SL + E + ++ + Y+H +
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---R 161
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
++HRD+ + L+ + + + DFG A ++ D L GT YIAPE+ + +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 960 CDVFNFGVLVLEVIEGKHP 978
DV++ G ++ ++ GK P
Sbjct: 222 VDVWSIGCIMYTLLVGKPP 240
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVS-EIT---EIRHRNIVKFY 839
G GG + E++ DT+ V +P + +Q+ +S EI+ + H+++V F+
Sbjct: 48 GKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 840 GFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
GF +F+V E R SL + E + ++ + Y+H +
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---R 159
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
++HRD+ + L+ + + + DFG A ++ D L GT YIAPE+ + +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
DV++ G ++ ++ GK P
Sbjct: 220 VDVWSIGCIMYTLLVGKPP 238
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
++ + +I+H NIV HL+L+ + + G L + + E D S+ +I
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIF 123
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVL---LDLEYKAHVSDFGTAKFLKPDSSNWSELA 940
V +A+ Y+H I+HRD+ + +L LD + K +SDFG +K P S S
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-LSTAC 179
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT GY+APE+ ++ D ++ GV+ ++ G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
++ + +I+H NIV HL+L+ + + G L + + E D S+ +I
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIF 123
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVL---LDLEYKAHVSDFGTAKFLKPDSSNWSELA 940
V +A+ Y+H I+HRD+ + +L LD + K +SDFG +K P S S
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-LSTAC 179
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT GY+APE+ ++ D ++ GV+ ++ G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
++ + +I+H NIV HL+L+ + + G L + + E D S+ +I
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIF 123
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVL---LDLEYKAHVSDFGTAKFLKPDSSNWSELA 940
V +A+ Y+H I+HRD+ + +L LD + K +SDFG +K P S S
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-LSTAC 179
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT GY+APE+ ++ D ++ GV+ ++ G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
++ + +I+H NIV HL+L+ + + G L + + E D S+ +I
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIF 123
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVL---LDLEYKAHVSDFGTAKFLKPDSSNWSELA 940
V +A+ Y+H I+HRD+ + +L LD + K +SDFG +K P S S
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-LSTAC 179
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT GY+APE+ ++ D ++ GV+ ++ G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 785 GTGGCGTVYKAELTSGDT-RAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G V+ L + +T AVK ++ + F+ E + + H NIV+ G
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL---KAKFLQEARILKQYSHPNIVRLIG 179
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ Q +++V E ++ G T L E A L + ++ A + Y+ C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG----TCGYIAPELAYTMRA 956
+HRD++++ L+ + +SDFG ++ + ++ G + APE R
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 957 NEKCDVFNFGVLVLEVI 973
+ + DV++FG+L+ E
Sbjct: 293 SSESDVWSFGILLWETF 309
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 20/196 (10%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 20 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E+ + + +++A+ Y+ F
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNF--- 130
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ ++ AG + APE LAY +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAPESLAYN-KF 187
Query: 957 NEKCDVFNFGVLVLEV 972
+ K DV+ FGVL+ E+
Sbjct: 188 SIKSDVWAFGVLLWEI 203
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 19/221 (8%)
Query: 766 VNNQELLSASTFEGKMVLHGTGGCGTVY--KAELTSGDTRAVKKLHSLPTGEIGINQKGF 823
V + + + ++G+ VL G G G V K ++T G AVK + + +++
Sbjct: 17 VQHSTAIFSDRYKGQRVL-GKGSFGEVILCKDKIT-GQECAVKVISKRQVKQ-KTDKESL 73
Query: 824 VSEI---TEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN 880
+ E+ ++ H NI K Y F + +LV E G L + + +E+D ++
Sbjct: 74 LREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 130
Query: 881 VIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWS 937
+I+ V + ++Y H + I+HRD+ + +LL+ + K + DFG + + S
Sbjct: 131 IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXK 186
Query: 938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT YIAPE+ + +EKCDV++ GV++ ++ G P
Sbjct: 187 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 30 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 85 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 139
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 247
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 248 YQLM----RLCWKERPEDRPTFDYLRSVL 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 22 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 240 YQLM----RLCWKERPEDRPTFDYLRSVL 264
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 22 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 240 YQLM----RLCWKERPEDRPTFDYLRSVL 264
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 28 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 137
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 245
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 246 YQLM----RLCWKERPEDRPTFDYLRSVL 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 23 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 78 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 132
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 240
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 241 YQLM----RLCWKERPEDRPTFDYLRSVL 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 24 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 79 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 133
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 241
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 242 YQLM----RLCWKERPEDRPTFDYLRSVL 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 31 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 86 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 140
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 248
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 249 YQLM----RLCWKERPEDRPTFDYLRSVL 273
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVA 886
+ EI+H N+V+ G C+ ++V EY+ G+L L E E+ + + ++
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQIS 140
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---C 943
+A+ Y+ F +HRD++++ L+ + V+DFG ++ + D+ ++ AG
Sbjct: 141 SAMEYLEKKNF---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPI 195
Query: 944 GYIAPE-LAYTMRANEKCDVFNFGVLVLEV 972
+ APE LAY + K DV+ FGVL+ E+
Sbjct: 196 KWTAPESLAYNT-FSIKSDVWAFGVLLWEI 224
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ + AVK +L G + + + F+ E + ++H +V+ Y
Sbjct: 22 GAGQFGEVWMGYYNNSTKVAVK---TLKPGTMSV--QAFLEEANLMKTLQHDKLVRLYAV 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+ +GSL L ++ L K ++ +A ++Y+ + +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---I 132
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + VL+ ++DFG A+ ++ + E A + APE K
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 961 DVFNFGVLVLEVIE-GKHP 978
DV++FG+L+ E++ GK P
Sbjct: 193 DVWSFGILLYEIVTYGKIP 211
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSY 891
H +I+ + +FLV++ + +G L L+ + +E + ++++ + A+S+
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE---KETRSIMRSLLEAVSF 215
Query: 892 MHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-L 950
+H + I+HRD+ + +LLD + +SDFG + L+P EL GT GY+APE L
Sbjct: 216 LHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP-GEKLRELCGTPGYLAPEIL 271
Query: 951 AYTMRAN-----EKCDVFNFGVLVLEVIEGKHP 978
+M ++ D++ GV++ ++ G P
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 96/224 (42%), Gaps = 17/224 (7%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRV-NVIKGV 885
+ ++ H N++K+Y L +V E + G L+ ++ + L + V +
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 886 ANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGY 945
+AL +MH ++HRDI V + + D G +F ++ L GT Y
Sbjct: 146 CSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYY 202
Query: 946 IAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDS 1005
++PE + N K D+++ G L+ E+ + P + N+ + +
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY---------GDKMNLYSLCKKIEQC 253
Query: 1006 RLPP-PLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048
PP P E+L+ ++ +C++ +P+ RP + V ++ R
Sbjct: 254 DYPPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYVYDVAKR 294
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 20/196 (10%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 20 GGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E+ + + +++A+ Y+ F
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNF--- 130
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ + AG + APE LAY +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYN-KF 187
Query: 957 NEKCDVFNFGVLVLEV 972
+ K DV+ FGVL+ E+
Sbjct: 188 SIKSDVWAFGVLLWEI 203
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 24/205 (11%)
Query: 785 GTGGCGTVY--KAELTSGDTRAVK--KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVK 837
G+G G V K +LT G RA+K K S+ T N + E+ ++ H NI+K
Sbjct: 30 GSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTS---NSGALLDEVAVLKQLDHPNIMK 85
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH-HDC 896
Y F ++ +LV E G L + +E+D + ++K V + +Y+H H+
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTYLHKHN- 141
Query: 897 FPPILHRDISSKKVLLDLEYK---AHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT 953
I+HRD+ + +LL+ + + + DFG + + E GT YIAPE+
Sbjct: 142 ---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPEV-LR 196
Query: 954 MRANEKCDVFNFGVLVLEVIEGKHP 978
+ +EKCDV++ GV++ ++ G P
Sbjct: 197 KKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 20/196 (10%)
Query: 785 GTGGCGTVYKAELTSGD-TRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYG 840
G G G VY+ T AVK L E + + F+ E + EI+H N+V+ G
Sbjct: 20 GGGQFGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C+ +++ E++ G+L L E E+ + + +++A+ Y+ F
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNF--- 130
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---CGYIAPE-LAYTMRA 956
+HRD++++ L+ + V+DFG ++ + D+ + AG + APE LAY +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYN-KF 187
Query: 957 NEKCDVFNFGVLVLEV 972
+ K DV+ FGVL+ E+
Sbjct: 188 SIKSDVWAFGVLLWEI 203
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 162/371 (43%), Gaps = 63/371 (16%)
Query: 44 ISHLSKLKHLDFSTNQFSGIIPPQ--------------------IGILTNLVVLRLSVNQ 83
+ +L+ L ++FS NQ + I P + + LTNL L L NQ
Sbjct: 59 VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQ 118
Query: 84 LNGLIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYL 143
+ + P L LT+LN L LS N + I A N L
Sbjct: 119 ITDIDP--LKNLTNLNRLELSSNTI-SDISALSGLTSLQQLSFSSNQVTDLKPLANLTTL 175
Query: 144 ----ISPHYG---SIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRI- 195
IS + S+ L NLES ++ + N S + P LG L NL + LN N++
Sbjct: 176 ERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITP--LGILTNLDELSLNGNQLK 230
Query: 196 -VGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSF 254
+G++ S L +L+ L L NQ+S + P +G L+ L L L N++S P L
Sbjct: 231 DIGTLAS----LTNLTDLDLANNQISN-LAPLSG-LTKLTELKLGANQISNISP--LAGL 282
Query: 255 KSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKT 314
+L L L+ NQL P NL +L +L ++ N +S P + +L L L+ S
Sbjct: 283 TALTNLELNENQLEDISP--ISNLKNLTYLTLY-FNNISDISP--VSSLTKLQRLFFSNN 337
Query: 315 QLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLS--------VN-KLN 365
++S SL NL+NI L N + P L L ++QL L+ VN K N
Sbjct: 338 KVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKAN 393
Query: 366 GSIPHCLGNLS 376
SIP+ + N++
Sbjct: 394 VSIPNTVKNVT 404
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 71/286 (24%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLD---FSTNQFSGIIPPQIGILTNLVVLRLSVNQLN 85
LD+S N++ + IS L+KL +L+ + NQ S I P +GILTNL L L+ NQL
Sbjct: 178 LDISSNKV-----SDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 230
Query: 86 GLIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLIS 145
+ L LT+L +L L+ N+++ P
Sbjct: 231 DI--GTLASLTNLTDLDLANNQISNLAP-------------------------------- 256
Query: 146 PHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGN 205
L L + L N S + P L GL LT + LN N++ P I N
Sbjct: 257 ---------LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 303
Query: 206 LRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHN 265
L++L+YL L N +S P +L+ L+ L+ +N++S L + ++ +L HN
Sbjct: 304 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGHN 359
Query: 266 QLNGSLPSSFGNLSSLKHLHVHN-------IN-KLSGSIPKEIGNL 303
Q++ P NL+ + L +++ +N K + SIP + N+
Sbjct: 360 QISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 403
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 138/337 (40%), Gaps = 73/337 (21%)
Query: 347 ELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYL 406
+L ++ +L L + ++G L NL+ + F N+L+ P ++N+ KL L
Sbjct: 39 DLDQVTTLQADRLGIKSIDGV--EYLNNLTQINF---SNNQLTDITP--LKNLTKLVDIL 91
Query: 407 LFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISE 466
+ NQ P + +LT ++ NN P L+N T+L L L N ++ +IS
Sbjct: 92 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISA 146
Query: 467 VFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526
+ G+ L L+ N+++ P + N+T L +LD
Sbjct: 147 LSGLT-------------------------SLQQLSFSSNQVTDLKP--LANLTTLERLD 179
Query: 527 FSSNRLVGQIPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXXXXXXXXSANRLSKLIPK 586
SSN++ DI + N++S + P
Sbjct: 180 ISSNKV-------------------------SDI-SVLAKLTNLESLIATNNQISDITP- 212
Query: 587 NLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMN 646
LG L L L+L+ NQ ++I + L L+ LDL++N + P + L L +
Sbjct: 213 -LGILTNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 267
Query: 647 LLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683
L N++S P + L++++++ N+L+ P S
Sbjct: 268 LGANQISNISP--LAGLTALTNLELNENQLEDISPIS 302
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In
Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 120/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 22 GAGQAGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ E A + APE K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 240 YQLM----RLCWKERPEDRPTFDYLRSVL 264
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 28 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 137
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 245
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 246 YQLM----RLCWKERPEDRPTFDYLRSVL 270
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 32 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 86
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 87 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 141
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 249
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 250 YQLM----RLCWKERPEDRPTFDYLRSVL 274
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 22 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 239
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 240 YQLM----RLCWKERPEDRPTFDYLRSVL 264
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 17 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 72 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 126
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 234
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 235 YQLM----RLCWKERPEDRPTFDYLRSVL 259
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 27 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 82 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 136
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 244
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 245 YQLM----RLCWKERPEDRPTFDYLRSVL 269
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVS-EIT---EIRHRNIVKFY 839
G GG + E++ DT+ V +P + +Q+ +S EI+ + H+++V F+
Sbjct: 24 GKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 840 GFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
GF +F+V E R SL + E + ++ + Y+H +
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---R 135
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
++HRD+ + L+ + + + DFG A ++ D L GT YIAPE+ + +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 960 CDVFNFGVLVLEVIEGKHP 978
DV++ G ++ ++ GK P
Sbjct: 196 VDVWSIGCIMYTLLVGKPP 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 800 GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQH-LFLVYEYLERG 858
G+ AVK + + T + + + S +T++RH N+V+ G + L++V EY+ +G
Sbjct: 216 GNKVAVKCIKNDATAQAFLAE---ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 272
Query: 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA 918
SL L + + L + V A+ Y+ + F +HRD++++ VL+ + A
Sbjct: 273 SLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVA 328
Query: 919 HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
VSDFG K SS + APE + + K DV++FG+L+ E+
Sbjct: 329 KVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 800 GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQH-LFLVYEYLERG 858
G+ AVK + + T + + + S +T++RH N+V+ G + L++V EY+ +G
Sbjct: 35 GNKVAVKCIKNDATAQAFLAE---ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 91
Query: 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA 918
SL L + + L + V A+ Y+ + F +HRD++++ VL+ + A
Sbjct: 92 SLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVA 147
Query: 919 HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
VSDFG K SS + APE + K DV++FG+L+ E+
Sbjct: 148 KVSDFG---LTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSL----PTGEIGINQK--GFVSEI---TEIRHRNI 835
G GG G V+K L ++V + SL GE + +K F E+ + + H NI
Sbjct: 28 GKGGFGLVHKGRLVK--DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 836 VKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHD 895
VK YG + + V E++ G L L ++A + WS ++ ++ +A + YM +
Sbjct: 86 VKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQNQ 141
Query: 896 CFPPILHRDISSKKVLL-----DLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPEL 950
PPI+HRD+ S + L + A V+DF + + + S L G ++APE
Sbjct: 142 N-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---QQSVHSVSGLLGNFQWMAPET 197
Query: 951 --AYTMRANEKCDVFNFGVLVLEVIEGKHP 978
A EK D ++F +++ ++ G+ P
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 99/232 (42%), Gaps = 20/232 (8%)
Query: 756 RTDSQEGQN-DVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT 813
+ S+EG VN+ L FE VL G G G V A + +GD AVK L
Sbjct: 3 KESSKEGNGIGVNSSNRLGIDNFEFIRVL-GKGSFGKVMLARVKETGDLYAVKVLKK--- 58
Query: 814 GEIGINQKGFVSEITEIRHRNIVKFYGF------CSHT-QHLFLVYEYLERGSLATILSN 866
++ + +TE R ++ + + F C T LF V E++ G L +
Sbjct: 59 -DVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK 117
Query: 867 EATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTA 926
+ D ++ + +AL ++H I++RD+ VLLD E ++DFG
Sbjct: 118 ---SRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMC 171
Query: 927 KFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
K + + GT YIAPE+ M D + GVL+ E++ G P
Sbjct: 172 KEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 122/269 (45%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ A+K +L G + + + F+ E + +++H +V+ Y
Sbjct: 18 GNGQFGEVWMGTWNGNTKVAIK---TLKPGTM--SPESFLEEAQIMKKLKHDKLVQLYAV 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
S + +++V EY+ +GSL L + A L V++ VA ++Y+ + +
Sbjct: 73 VSE-EPIYIVTEYMNKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIERMNY---I 127
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HRD+ S +L+ ++DFG A+ ++ + + A + APE A R K
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ +G+ +PG N ++ R+P P ++
Sbjct: 188 DVWSFGILLTELVTKGRVPYPG------------MNNREVLEQVERGYRMPCP----QDC 231
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
S+ + C +P+ RPT + + + L
Sbjct: 232 PISLHELMIHCWKKDPEERPTFEYLQSFL 260
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G G G VY A ++ + + A+KK+ S + + + E+ ++RH N +++ G
Sbjct: 24 GHGSFGAVYFARDVRNSEVVAIKKM-SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 841 FCSHTQHL-FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH-HDCFP 898
C +H +LV EY GS + +L E L + V G L+Y+H H+
Sbjct: 83 -CYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 135
Query: 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
++HRD+ + +LL + DFG+A + P + GT ++APE+ M +
Sbjct: 136 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQ 190
Query: 959 ---KCDVFNFGVLVLEVIEGKHP 978
K DV++ G+ +E+ E K P
Sbjct: 191 YDGKVDVWSLGITCIELAERKPP 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G G G VY A ++ + + A+KK+ S + + + E+ ++RH N +++ G
Sbjct: 63 GHGSFGAVYFARDVRNSEVVAIKKM-SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 841 FCSHTQHL-FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH-HDCFP 898
C +H +LV EY GS + +L E L + V G L+Y+H H+
Sbjct: 122 -CYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 174
Query: 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
++HRD+ + +LL + DFG+A + P + GT ++APE+ M +
Sbjct: 175 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQ 229
Query: 959 ---KCDVFNFGVLVLEVIEGKHP 978
K DV++ G+ +E+ E K P
Sbjct: 230 YDGKVDVWSLGITCIELAERKPP 252
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 32/216 (14%)
Query: 779 GKMVLHGTGGCGTVYKA------------ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE 826
G V+ G G G VY E+ D+R + LH EI +++
Sbjct: 11 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE----EIALHK------ 60
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVA 886
++H+NIV++ G S + + E + GSL+ +L ++ + + K +
Sbjct: 61 --HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL 118
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKA--HVSDFGTAKFLKPDSSNWSELAGTCG 944
L Y+H + I+HRDI VL++ Y +SDFGT+K L + GT
Sbjct: 119 EGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQ 174
Query: 945 YIAPELAYT--MRANEKCDVFNFGVLVLEVIEGKHP 978
Y+APE+ + D+++ G ++E+ GK P
Sbjct: 175 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVA 886
+ ++ H +VK + L+L+ ++L G L T LS E E D + +A
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK---FYLAELA 140
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYI 946
L ++H I++RD+ + +LLD E ++DFG +K GT Y+
Sbjct: 141 LGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYM 197
Query: 947 APELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
APE+ + D +++GVL+ E++ G P
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 32/216 (14%)
Query: 779 GKMVLHGTGGCGTVYKA------------ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE 826
G V+ G G G VY E+ D+R + LH EI +++
Sbjct: 25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE----EIALHK------ 74
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVA 886
++H+NIV++ G S + + E + GSL+ +L ++ + + K +
Sbjct: 75 --HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL 132
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKA--HVSDFGTAKFLKPDSSNWSELAGTCG 944
L Y+H + I+HRDI VL++ Y +SDFGT+K L + GT
Sbjct: 133 EGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQ 188
Query: 945 YIAPELAYT--MRANEKCDVFNFGVLVLEVIEGKHP 978
Y+APE+ + D+++ G ++E+ GK P
Sbjct: 189 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V + ++ H NI+K + + ++V E G L + +E D ++ +IK
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIK 128
Query: 884 GVANALSYMH-HDCFPPILHRDISSKKVLLDLEYK---AHVSDFGTAKFLKPDSSNWSEL 939
V + ++YMH H+ I+HRD+ + +LL+ + K + DFG + + ++ +
Sbjct: 129 QVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDR 183
Query: 940 AGTCGYIAPELAYTMRA--NEKCDVFNFGVLVLEVIEGKHP 978
GT YIAPE+ +R +EKCDV++ GV++ ++ G P
Sbjct: 184 IGTAYYIAPEV---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V + ++ H NI+K + + ++V E G L + +E D ++ +IK
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIK 128
Query: 884 GVANALSYMH-HDCFPPILHRDISSKKVLLDLEYK---AHVSDFGTAKFLKPDSSNWSEL 939
V + ++YMH H+ I+HRD+ + +LL+ + K + DFG + + ++ +
Sbjct: 129 QVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDR 183
Query: 940 AGTCGYIAPELAYTMRA--NEKCDVFNFGVLVLEVIEGKHP 978
GT YIAPE+ +R +EKCDV++ GV++ ++ G P
Sbjct: 184 IGTAYYIAPEV---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 783 LHGTGGCGTVYKAELT----SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKF 838
LH T G G K +L +G+ A+K + G K + + +RH++I +
Sbjct: 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQL 73
Query: 839 YGFCSHTQHLFLVYEYLERGSLAT-ILSNEATAAELDWSKRVNVIKGVANALSYMHHDCF 897
Y +F+V EY G L I+S + + E RV V + + +A++Y+H +
Sbjct: 74 YHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE---ETRV-VFRQIVSAVAYVHSQGY 129
Query: 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTM 954
HRD+ + +L D +K + DFG KP + L CG Y APEL
Sbjct: 130 A---HRDLKPENLLFDEYHKLKLIDFGLCA--KPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 955 R-ANEKCDVFNFGVLVLEVIEGKHP 978
+ DV++ G+L+ ++ G P
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 14/215 (6%)
Query: 772 LSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVK-KLHSLPTGEIGINQKGFVSEIT-- 828
L AS + + V+ G G G V L R V + +L G ++ F+ E +
Sbjct: 40 LDASCIKIERVI-GAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIM 98
Query: 829 -EIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVAN 887
+ H N+V G + + + +V E++E G+L L + + V +++G+A
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD--GQFTVIQLVGMLRGIAA 156
Query: 888 ALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG---TCG 944
+ Y+ + +HRD++++ +L++ VSDFG ++ ++ D G
Sbjct: 157 GMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ APE + DV+++G+++ EV+ G+ P
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 151 IPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEI-GNLRSL 209
IP D L+ L +N S + ++ L L +YLN+N++ ++P+ I L++L
Sbjct: 35 IPADTKKLD------LQSNKLSSLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNL 87
Query: 210 SYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNG 269
L + N+L L NL L L N+L P S L YL L +N+L
Sbjct: 88 ETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ- 146
Query: 270 SLPSS-FGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLS 328
SLP F L+SLK L ++N N+L L L L L QL + +L
Sbjct: 147 SLPKGVFDKLTSLKELRLYN-NQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLE 205
Query: 329 NIRGLYIREN 338
++ L ++EN
Sbjct: 206 KLKMLQLQEN 215
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 231 SNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSS-FGNLSSLKHLHVHNI 289
++ K L L N+LS L LYL+ N+L +LP+ F L +L+ L V +
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTD- 94
Query: 290 NKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEEL- 348
NKL L +L+ L L + QL P +L+ + L + N L S+P+ +
Sbjct: 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVF 153
Query: 349 GRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLF 408
+L SL +L L N+L L+ LK L N+L ++++KL L
Sbjct: 154 DKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213
Query: 409 ENQF 412
EN +
Sbjct: 214 ENPW 217
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 33/227 (14%)
Query: 290 NKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELG 349
NKLS K L L L+L+ +L L N+ L++ +N L
Sbjct: 47 NKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFD 106
Query: 350 RLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEI-ENMKKLNKYLLF 408
+L +L++L L N+L P +L+ L + +L NEL S+P+ + + + L + L+
Sbjct: 107 QLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLY 165
Query: 409 ENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVF 468
NQ +P+ + T L +L+L+ NQL F
Sbjct: 166 NNQLK-RVPEG-----------------------AFDKLTELKTLKLDNNQLKRVPEGAF 201
Query: 469 GIYPDLELLDLSNNNFFGEIS-----SNWIKCPQLATLNMGGNEISG 510
L++L L N + + + W+K + A +GG + +G
Sbjct: 202 DSLEKLKMLQLQENPWDCTCNGIIYMAKWLK--KKADEGLGGVDTAG 246
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 39 TIPTQI-SHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTS 97
T+P I L L+ L + N+ + L NL LRL NQL L P LT
Sbjct: 75 TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTK 134
Query: 98 LNELALSYNRLNGSIP 113
L L+L YN L S+P
Sbjct: 135 LTYLSLGYNELQ-SLP 149
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 92/239 (38%), Gaps = 46/239 (19%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLI 88
+D S +L IP+ I + K LD +N+ S + LT L +L L+ N+L L
Sbjct: 21 VDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77
Query: 89 PEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLISPHY 148
EL +L L ++ N+L ++P
Sbjct: 78 AGIFKELKNLETLWVTDNKLQ-ALP----------------------------------I 102
Query: 149 GSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEI-GNLR 207
G Q L NL + L N + PR L LT++ L N + S+P + L
Sbjct: 103 GVFDQ-LVNL---AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL-QSLPKGVFDKLT 157
Query: 208 SLSYLGLNKNQLSGSIPPTA-GNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHN 265
SL L L NQL +P A L+ LK L L +N+L S + L L L N
Sbjct: 158 SLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 36/82 (43%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNG 86
A L L NQL P L+KL +L N+ + LT+L LRL NQL
Sbjct: 112 AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR 171
Query: 87 LIPEELGELTSLNELALSYNRL 108
+ +LT L L L N+L
Sbjct: 172 VPEGAFDKLTELKTLKLDNNQL 193
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 64/177 (36%), Gaps = 24/177 (13%)
Query: 308 HLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGS 367
L L +LS + L+ +R LY+ +N L LK+L L ++ NKL
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 368 IPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLT 427
L NL L N+L P+ +++ KL L N+ LP+ V
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGV------- 152
Query: 428 HFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNF 484
TSL LRL NQL F +L+ L L NN
Sbjct: 153 ----------------FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL 193
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 70/177 (39%), Gaps = 4/177 (2%)
Query: 356 QLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEI-ENMKKLNKYLLFENQFTG 414
+L L NKL+ L+ L+ L +N+L ++P I + +K L + +N+
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQA 99
Query: 415 YLPQNVC-QSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPD 473
LP V Q +L + N PR + T L L L N+L VF
Sbjct: 100 -LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTS 158
Query: 474 LELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSN 530
L+ L L NN + K +L TL + N++ ++ +L L N
Sbjct: 159 LKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNG 86
YL L N+L L+ LK L NQ + LT L L+L NQL
Sbjct: 136 TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195
Query: 87 LIPEELGELTSLNELAL 103
+PE G SL +L +
Sbjct: 196 -VPE--GAFDSLEKLKM 209
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 56 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 111
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HRD++++ +L++
Sbjct: 112 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 166
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + APE + + DV++FGV++
Sbjct: 167 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 226
Query: 971 EVI 973
E+
Sbjct: 227 ELF 229
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 38 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HRD++++ +L++
Sbjct: 94 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 148
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + + APE + + DV++FGV++
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 971 EVI 973
E+
Sbjct: 209 ELF 211
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 783 LHGTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR----HRNIVK 837
L G G G VYK + +G A+K + E I Q EI ++ HRNI
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ-----EINMLKKYSHHRNIAT 85
Query: 838 FYG-FCSHT-----QHLFLVYEYLERGSLATILSN-EATAAELDWSKRVNVIKGVANALS 890
+YG F L+LV E+ GS+ ++ N + + +W + + + LS
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLS 143
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPEL 950
++H ++HRDI + VLL + + DFG + L + GT ++APE+
Sbjct: 144 HLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEV 200
Query: 951 AYTMRANE-----KCDVFNFGVLVLEVIEGKHP 978
+ K D+++ G+ +E+ EG P
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 122/270 (45%), Gaps = 35/270 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ A AVK ++ G + + + F++E + ++H +VK +
Sbjct: 197 GAGQFGEVWMATYNKHTKVAVK---TMKPGSMSV--EAFLAEANVMKTLQHDKLVKLHAV 251
Query: 842 CSHTQHLFLVYEYLERGSLATIL-SNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ + ++++ E++ +GSL L S+E + L K ++ +A ++++ +
Sbjct: 252 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY--- 305
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEK 959
+HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 960 CDVFNFGVLVLEVIE-GK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV++FG+L++E++ G+ +PG N ++ R+P P EE
Sbjct: 366 SDVWSFGILLMEIVTYGRIPYPG------------MSNPEVIRALERGYRMPRPENCPEE 413
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ + C P+ RPT + + ++L
Sbjct: 414 ----LYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 36/231 (15%)
Query: 831 RHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATA-------AELDWSKRVNVIK 883
+H NIV G C+H + ++ EY G L L +A A L+ ++
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 884 GVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG- 941
VA ++++ +C +HRD++++ VLL + A + DFG A+ + DS+ +
Sbjct: 168 QVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223
Query: 942 -TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNI 997
++APE + + DV+++G+L+ E+ +PG I
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG-----------------I 266
Query: 998 VVNDLIDSRLPPPLGEVEEKL--KSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+VN + + K++ ++ C P RPT Q++C+ L
Sbjct: 267 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 317
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 56 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 111
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HRD++++ +L++
Sbjct: 112 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 166
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + APE + + DV++FGV++
Sbjct: 167 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 226
Query: 971 EVI 973
E+
Sbjct: 227 ELF 229
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 39/215 (18%)
Query: 785 GTGGCGTVYKAELTSGDTR---AVKKLHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V KA + R A+K++ + + + + F E+ + H NI+
Sbjct: 24 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCKLGHHPNIIN 80
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNE-------------ATAAELDWSKRVNVIKG 884
G C H +L+L EY G+L L +TA+ L + ++
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG 944
VA + Y+ F +HRD++++ +L+ Y A ++DFG ++ + T G
Sbjct: 141 VARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMG 191
Query: 945 -----YIAPE-LAYTMRANEKCDVFNFGVLVLEVI 973
++A E L Y++ DV+++GVL+ E++
Sbjct: 192 RLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 225
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 39/215 (18%)
Query: 785 GTGGCGTVYKAELTSGDTR---AVKKLHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V KA + R A+K++ + + + + F E+ + H NI+
Sbjct: 34 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCKLGHHPNIIN 90
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNE-------------ATAAELDWSKRVNVIKG 884
G C H +L+L EY G+L L +TA+ L + ++
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG 944
VA + Y+ F +HRD++++ +L+ Y A ++DFG ++ + T G
Sbjct: 151 VARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMG 201
Query: 945 -----YIAPE-LAYTMRANEKCDVFNFGVLVLEVI 973
++A E L Y++ DV+++GVL+ E++
Sbjct: 202 RLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 235
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 38 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HRD++++ +L++
Sbjct: 94 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 148
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + APE + + DV++FGV++
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 971 EVI 973
E+
Sbjct: 209 ELF 211
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ AVK SL G + + F++E + +++H+ +V+ Y
Sbjct: 18 GAGQFGEVWMGYYNGHTKVAVK---SLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ EY+E GSL L + +L +K +++ +A ++++ + +
Sbjct: 73 VTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNY---I 127
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEKC 960
HR++ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 961 DVFNFGVLVLEVI-EGK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L+ E++ G+ +PG N ++ N R+ P EE
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPG------------MTNPEVIQNLERGYRMVRPDNCPEEL 235
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ M LC P+ RPT + ++L
Sbjct: 236 YQLM----RLCWKERPEDRPTFDYLRSVL 260
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 22/169 (13%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAE------------LD 874
+T ++H++IV+F+G C+ + L +V+EY+ G L L + A+ L
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 875 WSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934
+ + V VA + Y+ F +HRD++++ L+ + DFG ++ + S+
Sbjct: 134 LGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--ST 188
Query: 935 NWSELAGTC----GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
++ + G ++ PE + + DV++FGV++ E+ GK P
Sbjct: 189 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 22/169 (13%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAE------------LD 874
+T ++H++IV+F+G C+ + L +V+EY+ G L L + A+ L
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 875 WSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934
+ + V VA + Y+ F +HRD++++ L+ + DFG ++ + S+
Sbjct: 128 LGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--ST 182
Query: 935 NWSELAGTC----GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
++ + G ++ PE + + DV++FGV++ E+ GK P
Sbjct: 183 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 22/169 (13%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAE------------LD 874
+T ++H++IV+F+G C+ + L +V+EY+ G L L + A+ L
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 875 WSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934
+ + V VA + Y+ F +HRD++++ L+ + DFG ++ + S+
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--ST 211
Query: 935 NWSELAGTC----GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
++ + G ++ PE + + DV++FGV++ E+ GK P
Sbjct: 212 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 22/202 (10%)
Query: 785 GTGGCGTVYKAELT-----SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIV 836
G G G+V +G+ AVKKL + + F EI ++H NIV
Sbjct: 23 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIV 78
Query: 837 KFYGFC--SHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
K+ G C + ++L L+ EYL GSL L + +D K + + + Y+
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELA 951
+ +HRD++++ +L++ E + + DFG K L D + APE
Sbjct: 137 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 952 YTMRANEKCDVFNFGVLVLEVI 973
+ + DV++FGV++ E+
Sbjct: 194 TESKFSVASDVWSFGVVLYELF 215
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 155/365 (42%), Gaps = 52/365 (14%)
Query: 44 ISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELAL 103
+ +L+ L ++FS NQ + I P + LT LV + ++ NQ+ + P L LT+L L L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 104 SYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLISPHYGSIPQD---LGNLES 160
N++ P + L ++G+ D L NL +
Sbjct: 115 FNNQITDIDPLKNLTNLNRLELSSNTISDISAL-SGLTSLQQLNFGNQVTDLKPLANLTT 173
Query: 161 PVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLS 220
+ + +N S + L L NL + NN+I P +G L +L L LN NQL
Sbjct: 174 LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 229
Query: 221 GSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSS 280
T +L+NL L L +N++S P L L L L NQ++ P L++
Sbjct: 230 D--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTA 283
Query: 281 LKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIP------------------- 321
L +L + N N+L P I NLK+L++L L +S P
Sbjct: 284 LTNLEL-NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 340
Query: 322 -PSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLS--------VN-KLNGSIPHC 371
SL NL+NI L N + P L L ++QL L+ VN K N SIP+
Sbjct: 341 VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNT 398
Query: 372 LGNLS 376
+ N++
Sbjct: 399 VKNVT 403
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 128/286 (44%), Gaps = 71/286 (24%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLD---FSTNQFSGIIPPQIGILTNLVVLRLSVNQLN 85
LD+S N++ + IS L+KL +L+ + NQ S I P +GILTNL L L+ NQL
Sbjct: 177 LDISSNKV-----SDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 229
Query: 86 GLIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLIS 145
+ L LT+L +L L+ N+++ P
Sbjct: 230 DI--GTLASLTNLTDLDLANNQISNLAP-------------------------------- 255
Query: 146 PHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGN 205
L L + L N S + P L GL LT + LN N++ P I N
Sbjct: 256 ---------LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 302
Query: 206 LRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHN 265
L++L+YL L N +S P +L+ L+ L+ ++N++S L + ++ +L HN
Sbjct: 303 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHN 358
Query: 266 QLNGSLPSSFGNLSSLKHLHVHN-------IN-KLSGSIPKEIGNL 303
Q++ P NL+ + L +++ +N K + SIP + N+
Sbjct: 359 QISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 402
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 140/337 (41%), Gaps = 74/337 (21%)
Query: 347 ELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYL 406
+L ++ +L L + ++G L NL+ + F N+L+ P ++N+ KL L
Sbjct: 39 DLDQVTTLQADRLGIKSIDGV--EYLNNLTQINF---SNNQLTDITP--LKNLTKLVDIL 91
Query: 407 LFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISE 466
+ NQ P + +LT ++ NN P L+N T+L L L N ++ +IS
Sbjct: 92 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISA 146
Query: 467 VFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526
+ G+ +L NF GN+++ P + N+T L +LD
Sbjct: 147 LSGLTSLQQL------NF--------------------GNQVTDLKP--LANLTTLERLD 178
Query: 527 FSSNRLVGQIPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXXXXXXXXSANRLSKLIPK 586
SSN++ DI + N++S + P
Sbjct: 179 ISSNKV-------------------------SDI-SVLAKLTNLESLIATNNQISDITP- 211
Query: 587 NLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMN 646
LG L L L+L+ NQ ++I + L L+ LDL++N + P + L L +
Sbjct: 212 -LGILTNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 266
Query: 647 LLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683
L N++S P + L++++++ N+L+ P S
Sbjct: 267 LGANQISNISP--LAGLTALTNLELNENQLEDISPIS 301
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 69 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HRD++++ +L++
Sbjct: 125 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 179
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + APE + + DV++FGV++
Sbjct: 180 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 239
Query: 971 EVI 973
E+
Sbjct: 240 ELF 242
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 45 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 100
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HRD++++ +L++
Sbjct: 101 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 155
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + APE + + DV++FGV++
Sbjct: 156 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 215
Query: 971 EVI 973
E+
Sbjct: 216 ELF 218
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 155/365 (42%), Gaps = 52/365 (14%)
Query: 44 ISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELAL 103
+ +L+ L ++FS NQ + I P + LT LV + ++ NQ+ + P L LT+L L L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 104 SYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLISPHYGSIPQD---LGNLES 160
N++ P + L ++G+ D L NL +
Sbjct: 115 FNNQITDIDPLKNLTNLNRLELSSNTISDISAL-SGLTSLQQLNFGNQVTDLKPLANLTT 173
Query: 161 PVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLS 220
+ + +N S + L L NL + NN+I P +G L +L L LN NQL
Sbjct: 174 LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 229
Query: 221 GSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSS 280
T +L+NL L L +N++S P L L L L NQ++ P L++
Sbjct: 230 D--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTA 283
Query: 281 LKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIP------------------- 321
L +L + N N+L P I NLK+L++L L +S P
Sbjct: 284 LTNLEL-NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSD 340
Query: 322 -PSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLS--------VN-KLNGSIPHC 371
SL NL+NI L N + P L L ++QL L+ VN K N SIP+
Sbjct: 341 VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNT 398
Query: 372 LGNLS 376
+ N++
Sbjct: 399 VKNVT 403
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 71/286 (24%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLD---FSTNQFSGIIPPQIGILTNLVVLRLSVNQLN 85
LD+S N++ + IS L+KL +L+ + NQ S I P +GILTNL L L+ NQL
Sbjct: 177 LDISSNKV-----SDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 229
Query: 86 GLIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLIS 145
+ L LT+L +L L+ N+++ P
Sbjct: 230 DI--GTLASLTNLTDLDLANNQISNLAP-------------------------------- 255
Query: 146 PHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGN 205
L L + L N S + P L GL LT + LN N++ P I N
Sbjct: 256 ---------LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 302
Query: 206 LRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHN 265
L++L+YL L N +S P +L+ L+ L+ +N++S L + ++ +L HN
Sbjct: 303 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGHN 358
Query: 266 QLNGSLPSSFGNLSSLKHLHVHN-------IN-KLSGSIPKEIGNL 303
Q++ P NL+ + L +++ +N K + SIP + N+
Sbjct: 359 QISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 402
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 140/337 (41%), Gaps = 74/337 (21%)
Query: 347 ELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYL 406
+L ++ +L L + ++G L NL+ + F N+L+ P ++N+ KL L
Sbjct: 39 DLDQVTTLQADRLGIKSIDGV--EYLNNLTQINF---SNNQLTDITP--LKNLTKLVDIL 91
Query: 407 LFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISE 466
+ NQ P + +LT ++ NN P L+N T+L L L N ++ +IS
Sbjct: 92 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISA 146
Query: 467 VFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526
+ G+ +L NF GN+++ P + N+T L +LD
Sbjct: 147 LSGLTSLQQL------NF--------------------GNQVTDLKP--LANLTTLERLD 178
Query: 527 FSSNRLVGQIPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXXXXXXXXSANRLSKLIPK 586
SSN++ DI + N++S + P
Sbjct: 179 ISSNKV-------------------------SDI-SVLAKLTNLESLIATNNQISDITP- 211
Query: 587 NLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMN 646
LG L L L+L+ NQ ++I + L L+ LDL++N + P + L L +
Sbjct: 212 -LGILTNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 266
Query: 647 LLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683
L N++S P + L++++++ N+L+ P S
Sbjct: 267 LGANQISNISP--LAGLTALTNLELNENQLEDISPIS 301
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 38 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HRD++++ +L++
Sbjct: 94 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 148
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + APE + + DV++FGV++
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 971 EVI 973
E+
Sbjct: 209 ELF 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 41 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 96
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HRD++++ +L++
Sbjct: 97 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 151
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + APE + + DV++FGV++
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 971 EVI 973
E+
Sbjct: 212 ELF 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 43 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 98
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HRD++++ +L++
Sbjct: 99 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 153
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + APE + + DV++FGV++
Sbjct: 154 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 213
Query: 971 EVI 973
E+
Sbjct: 214 ELF 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 22/202 (10%)
Query: 785 GTGGCGTVYKAELT-----SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIV 836
G G G+V +G+ AVKKL + + F EI ++H NIV
Sbjct: 18 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIV 73
Query: 837 KFYGFC--SHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
K+ G C + ++L L+ EYL GSL L + +D K + + + Y+
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELA 951
+ +HRD++++ +L++ E + + DFG K L D + APE
Sbjct: 132 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 952 YTMRANEKCDVFNFGVLVLEVI 973
+ + DV++FGV++ E+
Sbjct: 189 TESKFSVASDVWSFGVVLYELF 210
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSY 891
H NI++ FLV++ +++G L L+ + T +E + K + + V AL
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 892 MHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-L 950
++ I+HRD+ + +LLD + ++DFG + L P E+ GT Y+APE +
Sbjct: 143 LN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSYLAPEII 195
Query: 951 AYTMRAN-----EKCDVFNFGVLVLEVIEGKHP 978
+M N ++ D+++ GV++ ++ G P
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSY 891
H NI++ FLV++ +++G L L+ + T +E + K + + V AL
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 129
Query: 892 MHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-L 950
++ I+HRD+ + +LLD + ++DFG + L P E+ GT Y+APE +
Sbjct: 130 LN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSYLAPEII 182
Query: 951 AYTMRAN-----EKCDVFNFGVLVLEVIEGKHP 978
+M N ++ D+++ GV++ ++ G P
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + LV E E G L L + + ++ V+ + Y+
Sbjct: 432 IVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEE 487
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPE 949
F +HRD++++ VLL ++ A +SDFG +K L+ D + + A T G + APE
Sbjct: 488 SNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPE 542
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + K DV++FGVL+ E G+ P
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 36 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 91
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HRD++++ +L++
Sbjct: 92 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 146
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + APE + + DV++FGV++
Sbjct: 147 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 206
Query: 971 EVI 973
E+
Sbjct: 207 ELF 209
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + LV E E G L L + + ++ V+ + Y+
Sbjct: 433 IVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEE 488
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPE 949
F +HRD++++ VLL ++ A +SDFG +K L+ D + + A T G + APE
Sbjct: 489 SNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPE 543
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + K DV++FGVL+ E G+ P
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + LV E E G L L + + ++ V+ + Y+
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEE 129
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPE 949
F +HRD++++ VLL ++ A +SDFG +K L+ D + + A T G + APE
Sbjct: 130 SNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK--AQTHGKWPVKWYAPE 184
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + K DV++FGVL+ E G+ P
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 44 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 99
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HRD++++ +L++
Sbjct: 100 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVE 154
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + APE + + DV++FGV++
Sbjct: 155 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 214
Query: 971 EVI 973
E+
Sbjct: 215 ELF 217
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 57 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 112
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + Y+
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 167
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT-----CGYIA 947
F +HRD++++ +LD ++ V+DFG A+ + D +S T ++A
Sbjct: 168 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPVKWMA 223
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 24/264 (9%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G G VYKA+ A K+ + E + + + H NIVK +
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 105
Query: 845 TQHLFLVYEYLERGSL-ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
+L+++ E+ G++ A +L E E S+ V K +AL+Y+H + I+HR
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTE---SQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 904 DISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE----- 958
D+ + +L L+ ++DFG + GT ++APE+ + +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 959 KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL 1018
K DV++ G+ ++E+ E + P H M +++ I PP L +
Sbjct: 220 KADVWSLGITLIEMAEIEPPHH----------ELNPMRVLLK--IAKSEPPTLAQPSRWS 267
Query: 1019 KSMIAVAFLCLDANPDCRPTMQKV 1042
+ CL+ N D R T ++
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQL 291
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 43/284 (15%)
Query: 785 GTGGCGTVYKAELTS-GDTRAVKKL--HSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A G AV K+ L + ++ +SE+ + +H NIV
Sbjct: 47 GAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVN 106
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNEATA-------AELDWSKRVNVIKGVANALS 890
G C+H + ++ EY G L L +A A L+ ++ VA ++
Sbjct: 107 LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMA 166
Query: 891 YM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT--CGYIA 947
++ +C +HRD++++ VLL + A + DFG A+ + DS+ + ++A
Sbjct: 167 FLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDLID 1004
PE + + DV+++G+L+ E+ +PG I+VN
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG-----------------ILVNSKFY 265
Query: 1005 SRLPPPLGEVEEKL--KSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ + K++ ++ C P RPT Q++C+ L
Sbjct: 266 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 24/264 (9%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G G VYKA+ A K+ + E + + + H NIVK +
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 105
Query: 845 TQHLFLVYEYLERGSL-ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
+L+++ E+ G++ A +L E E S+ V K +AL+Y+H + I+HR
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTE---SQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 904 DISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE----- 958
D+ + +L L+ ++DFG + GT ++APE+ + +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 959 KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL 1018
K DV++ G+ ++E+ E + P H M +++ I PP L +
Sbjct: 220 KADVWSLGITLIEMAEIEPPHH----------ELNPMRVLLK--IAKSEPPTLAQPSRWS 267
Query: 1019 KSMIAVAFLCLDANPDCRPTMQKV 1042
+ CL+ N D R T ++
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQL 291
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 58 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 113
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + Y+
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 168
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT-----CGYIA 947
F +HRD++++ +LD ++ V+DFG A+ + D +S T ++A
Sbjct: 169 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPVKWMA 224
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 770 ELLSASTFEGKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE-- 826
E + FE VL G GG G V++ ++T +T + + L I N K
Sbjct: 12 EKIRPECFELLRVL-GKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 827 ----ITEIRHRNIVKF-YGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNV 881
+ E++H IV Y F + + L+L+ EYL G L L E E
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME---DTACFY 126
Query: 882 IKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG 941
+ ++ AL ++H I++RD+ + ++L+ + ++DFG K D + G
Sbjct: 127 LAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCG 183
Query: 942 TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
T Y+APE+ N D ++ G L+ +++ G P
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIR-HRN-----IVK 837
G GG Y E+T DT+ V +P + +QK +S TEI H++ +V
Sbjct: 35 GKGGFAKCY--EITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--TEIAIHKSLDNPHVVG 90
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNE--ATAAELDWSKRVNVIKGVANALSYMHHD 895
F+GF +++V E R SL + T E + R I+GV Y+H++
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN 145
Query: 896 CFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR 955
++HRD+ + L+ + + DFG A ++ D +L GT YIAPE+
Sbjct: 146 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 956 ANEKCDVFNFGVLVLEVIEGKHP 978
+ + D+++ G ++ ++ GK P
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPP 225
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Novel Bosutinib Isoform 1, Previously Thought To Be
Bosutinib
Length = 293
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 46/275 (16%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G G G VYKA+ +G A K + + E+ + ++ EI H IVK G
Sbjct: 20 GDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----EDYIVEIEILATCDHPYIVKLLG 75
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELD---WSKRVNVI-KGVANALSYMHHDC 896
H L+++ E+ G++ I+ ELD ++ V+ + + AL+++H
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIM------LELDRGLTEPQIQVVCRQMLEALNFLHSK- 128
Query: 897 FPPILHRDISSKKVLLDLEYKAHVSDFG-TAKFLKPDSSNWSELAGTCGYIAPELAY--T 953
I+HRD+ + VL+ LE ++DFG +AK LK S GT ++APE+ T
Sbjct: 129 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-FIGTPYWMAPEVVMCET 185
Query: 954 MRA---NEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPP 1010
M+ + K D+++ G+ ++E+ + + P H M +++ I PP
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEPPHH----------ELNPMRVLLK--IAKSDPPT 233
Query: 1011 L---GEVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
L + + + + +A LD NP+ RP+ ++
Sbjct: 234 LLTPSKWSVEFRDFLKIA---LDKNPETRPSAAQL 265
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 770 ELLSASTFEGKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSE-- 826
E + FE VL G GG G V++ ++T +T + + L I N K
Sbjct: 12 EKIRPECFELLRVL-GKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 827 ----ITEIRHRNIVKF-YGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNV 881
+ E++H IV Y F + + L+L+ EYL G L L E E
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME---DTACFY 126
Query: 882 IKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG 941
+ ++ AL ++H I++RD+ + ++L+ + ++DFG K D + G
Sbjct: 127 LAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG 183
Query: 942 TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
T Y+APE+ N D ++ G L+ +++ G P
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 46/275 (16%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G G G VYKA+ +G A K + + E+ + ++ EI H IVK G
Sbjct: 28 GDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----EDYIVEIEILATCDHPYIVKLLG 83
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELD---WSKRVNVI-KGVANALSYMHHDC 896
H L+++ E+ G++ I+ ELD ++ V+ + + AL+++H
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIM------LELDRGLTEPQIQVVCRQMLEALNFLHSK- 136
Query: 897 FPPILHRDISSKKVLLDLEYKAHVSDFG-TAKFLKPDSSNWSELAGTCGYIAPELAY--T 953
I+HRD+ + VL+ LE ++DFG +AK LK S GT ++APE+ T
Sbjct: 137 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-FIGTPYWMAPEVVMCET 193
Query: 954 MRA---NEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPP 1010
M+ + K D+++ G+ ++E+ + + P H M +++ I PP
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEPPHH----------ELNPMRVLLK--IAKSDPPT 241
Query: 1011 L---GEVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
L + + + + +A LD NP+ RP+ ++
Sbjct: 242 LLTPSKWSVEFRDFLKIA---LDKNPETRPSAAQL 273
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 785 GTGGCGTVY--KAELTSGDTRAVK--KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVK 837
G+G G V K +LT G RA+K K S+ T N + E+ ++ H NI+K
Sbjct: 13 GSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTS---NSGALLDEVAVLKQLDHPNIMK 68
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCF 897
Y F ++ +LV E G L + +E+D ++K V + +Y+H
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD---AAVIMKQVLSGTTYLHK--- 122
Query: 898 PPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
I+HRD+ + +LL+ + + + DFG + + E GT YIAPE+
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPEV-LRK 180
Query: 955 RANEKCDVFNFGVLVLEVIEGKHP 978
+ +EKCDV++ GV++ ++ G P
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIR-HRN-----IVK 837
G GG Y E+T DT+ V +P + +QK +S TEI H++ +V
Sbjct: 51 GKGGFAKCY--EITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--TEIAIHKSLDNPHVVG 106
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNE--ATAAELDWSKRVNVIKGVANALSYMHHD 895
F+GF +++V E R SL + T E + R I+GV Y+H++
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN 161
Query: 896 CFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR 955
++HRD+ + L+ + + DFG A ++ D +L GT YIAPE+
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 956 ANEKCDVFNFGVLVLEVIEGKHP 978
+ + D+++ G ++ ++ GK P
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 24/264 (9%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G G VYKA+ A K+ + E + + + H NIVK +
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 105
Query: 845 TQHLFLVYEYLERGSL-ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
+L+++ E+ G++ A +L E E S+ V K +AL+Y+H + I+HR
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTE---SQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 904 DISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE----- 958
D+ + +L L+ ++DFG + GT ++APE+ + +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 959 KCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL 1018
K DV++ G+ ++E+ E + P H M +++ I PP L +
Sbjct: 220 KADVWSLGITLIEMAEIEPPHH----------ELNPMRVLLK--IAKSEPPTLAQPSRWS 267
Query: 1019 KSMIAVAFLCLDANPDCRPTMQKV 1042
+ CL+ N D R T ++
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQL 291
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 161/371 (43%), Gaps = 63/371 (16%)
Query: 44 ISHLSKLKHLDFSTNQFSGIIPPQ--------------------IGILTNLVVLRLSVNQ 83
+ +L+ L ++FS NQ + I P + + LTNL L L NQ
Sbjct: 59 VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQ 118
Query: 84 LNGLIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYL 143
+ + P L LT+LN L LS N + I A N L
Sbjct: 119 ITDIDP--LKNLTNLNRLELSSNTI-SDISALSGLTSLQQLSFSSNQVTDLKPLANLTTL 175
Query: 144 ----ISPHYG---SIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRI- 195
IS + S+ L NLES ++ + N S + P LG L NL + LN N++
Sbjct: 176 ERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITP--LGILTNLDELSLNGNQLK 230
Query: 196 -VGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSF 254
+G++ S L +L+ L L NQ+S + P +G L+ L L L N++S P L
Sbjct: 231 DIGTLAS----LTNLTDLDLANNQISN-LAPLSG-LTKLTELKLGANQISNISP--LAGL 282
Query: 255 KSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKT 314
+L L L+ NQL P NL +L +L ++ N +S P + +L L L+
Sbjct: 283 TALTNLELNENQLEDISP--ISNLKNLTYLTLY-FNNISDISP--VSSLTKLQRLFFYNN 337
Query: 315 QLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLS--------VN-KLN 365
++S SL NL+NI L N + P L L ++QL L+ VN K N
Sbjct: 338 KVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKAN 393
Query: 366 GSIPHCLGNLS 376
SIP+ + N++
Sbjct: 394 VSIPNTVKNVT 404
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 128/286 (44%), Gaps = 71/286 (24%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLD---FSTNQFSGIIPPQIGILTNLVVLRLSVNQLN 85
LD+S N++ + IS L+KL +L+ + NQ S I P +GILTNL L L+ NQL
Sbjct: 178 LDISSNKV-----SDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 230
Query: 86 GLIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLIS 145
+ L LT+L +L L+ N+++ P
Sbjct: 231 DI--GTLASLTNLTDLDLANNQISNLAP-------------------------------- 256
Query: 146 PHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGN 205
L L + L N S + P L GL LT + LN N++ P I N
Sbjct: 257 ---------LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 303
Query: 206 LRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHN 265
L++L+YL L N +S P +L+ L+ L+ ++N++S L + ++ +L HN
Sbjct: 304 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHN 359
Query: 266 QLNGSLPSSFGNLSSLKHLHVHN-------IN-KLSGSIPKEIGNL 303
Q++ P NL+ + L +++ +N K + SIP + N+
Sbjct: 360 QISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 403
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 138/337 (40%), Gaps = 73/337 (21%)
Query: 347 ELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYL 406
+L ++ +L L + ++G L NL+ + F N+L+ P ++N+ KL L
Sbjct: 39 DLDQVTTLQADRLGIKSIDGV--EYLNNLTQINF---SNNQLTDITP--LKNLTKLVDIL 91
Query: 407 LFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISE 466
+ NQ P + +LT ++ NN P L+N T+L L L N ++ +IS
Sbjct: 92 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISA 146
Query: 467 VFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526
+ G+ L L+ N+++ P + N+T L +LD
Sbjct: 147 LSGLT-------------------------SLQQLSFSSNQVTDLKP--LANLTTLERLD 179
Query: 527 FSSNRLVGQIPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXXXXXXXXSANRLSKLIPK 586
SSN++ DI + N++S + P
Sbjct: 180 ISSNKV-------------------------SDI-SVLAKLTNLESLIATNNQISDITP- 212
Query: 587 NLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMN 646
LG L L L+L+ NQ ++I + L L+ LDL++N + P + L L +
Sbjct: 213 -LGILTNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 267
Query: 647 LLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683
L N++S P + L++++++ N+L+ P S
Sbjct: 268 LGANQISNISP--LAGLTALTNLELNENQLEDISPIS 302
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ + AVK +L G + + + F+ E + ++H +V+ Y
Sbjct: 21 GAGQFGEVWMGYYNNSTKVAVK---TLKPGTMSV--QAFLEEANLMKTLQHDKLVRLYAV 75
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ + ++++ E++ +GSL L ++ L K ++ +A ++Y+ + +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---I 131
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPEL----AYTMRA 956
HRD+ + VL+ ++DFG A+ ++ + E A + APE +T+++
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 957 NEKCDVFNFGVLVLEVIE-GKHP 978
N V++FG+L+ E++ GK P
Sbjct: 192 N----VWSFGILLYEIVTYGKIP 210
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 161/371 (43%), Gaps = 63/371 (16%)
Query: 44 ISHLSKLKHLDFSTNQFSGIIPPQ--------------------IGILTNLVVLRLSVNQ 83
+ +L+ L ++FS NQ + I P + + LTNL L L NQ
Sbjct: 59 VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQ 118
Query: 84 LNGLIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYL 143
+ + P L LT+LN L LS N + I A N L
Sbjct: 119 ITDIDP--LKNLTNLNRLELSSNTI-SDISALSGLTSLQQLNFSSNQVTDLKPLANLTTL 175
Query: 144 ----ISPHYG---SIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRI- 195
IS + S+ L NLES ++ + N S + P LG L NL + LN N++
Sbjct: 176 ERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITP--LGILTNLDELSLNGNQLK 230
Query: 196 -VGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSF 254
+G++ S L +L+ L L NQ+S + P +G L+ L L L N++S P L
Sbjct: 231 DIGTLAS----LTNLTDLDLANNQISN-LAPLSG-LTKLTELKLGANQISNISP--LAGL 282
Query: 255 KSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKT 314
+L L L+ NQL P NL +L +L ++ N +S P + +L L L+
Sbjct: 283 TALTNLELNENQLEDISP--ISNLKNLTYLTLY-FNNISDISP--VSSLTKLQRLFFYNN 337
Query: 315 QLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLS--------VN-KLN 365
++S SL NL+NI L N + P L L ++QL L+ VN K N
Sbjct: 338 KVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKAN 393
Query: 366 GSIPHCLGNLS 376
SIP+ + N++
Sbjct: 394 VSIPNTVKNVT 404
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 47/285 (16%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLI 88
L+ S NQ+ P +++L+ L+ LD S+N+ S I + LTNL L + NQ++ +
Sbjct: 156 LNFSSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDIT 211
Query: 89 PEELGELTSLNELALSYNRLN--GSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLISP 146
P LG LT+L+EL+L+ N+L G++ + + N ++P
Sbjct: 212 P--LGILTNLDELSLNGNQLKDIGTLASLTNLTDLD-------------LANNQISNLAP 256
Query: 147 HYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNL 206
G L + L N S + P L GL LT + LN N++ P I NL
Sbjct: 257 LSG--------LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNL 304
Query: 207 RSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQ 266
++L+YL L N +S P +L+ L+ L+ ++N++S L + ++ +L HNQ
Sbjct: 305 KNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQ 360
Query: 267 LNGSLPSSFGNLSSLKHLHVHN-------IN-KLSGSIPKEIGNL 303
++ P NL+ + L +++ +N K + SIP + N+
Sbjct: 361 ISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 403
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 73/337 (21%)
Query: 347 ELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYL 406
+L ++ +L L + ++G L NL+ + F N+L+ P ++N+ KL L
Sbjct: 39 DLDQVTTLQADRLGIKSIDGV--EYLNNLTQINF---SNNQLTDITP--LKNLTKLVDIL 91
Query: 407 LFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISE 466
+ NQ P + +LT ++ NN P L+N T+L L L N ++ +IS
Sbjct: 92 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISA 146
Query: 467 VFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526
+ G+ L LN N+++ P + N+T L +LD
Sbjct: 147 LSGLT-------------------------SLQQLNFSSNQVTDLKP--LANLTTLERLD 179
Query: 527 FSSNRLVGQIPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXXXXXXXXSANRLSKLIPK 586
SSN++ DI + N++S + P
Sbjct: 180 ISSNKV-------------------------SDI-SVLAKLTNLESLIATNNQISDITP- 212
Query: 587 NLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMN 646
LG L L L+L+ NQ ++I + L L+ LDL++N + P + L L +
Sbjct: 213 -LGILTNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 267
Query: 647 LLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683
L N++S P + L++++++ N+L+ P S
Sbjct: 268 LGANQISNISP--LAGLTALTNLELNENQLEDISPIS 302
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 849 FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSK 908
++V EY++ +L I+ E + + VI AL++ H + I+HRD+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 909 KVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA---GTCGYIAPELAYTMRANEKCDVFNF 965
+L+ V DFG A+ + ++ + A GT Y++PE A + + DV++
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 966 GVLVLEVIEGKHP 978
G ++ EV+ G+ P
Sbjct: 206 GCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 849 FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSK 908
++V EY++ +L I+ E + + VI AL++ H + I+HRD+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 909 KVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA---GTCGYIAPELAYTMRANEKCDVFNF 965
+++ V DFG A+ + ++ ++ A GT Y++PE A + + DV++
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 966 GVLVLEVIEGKHP 978
G ++ EV+ G+ P
Sbjct: 206 GCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 849 FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSK 908
++V EY++ +L I+ E + + VI AL++ H + I+HRD+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 909 KVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA---GTCGYIAPELAYTMRANEKCDVFNF 965
+++ V DFG A+ + ++ ++ A GT Y++PE A + + DV++
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 966 GVLVLEVIEGKHP 978
G ++ EV+ G+ P
Sbjct: 206 GCVLYEVLTGEPP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 849 FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSK 908
++V EY++ +L I+ E + + VI AL++ H + I+HRD+
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 162
Query: 909 KVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA---GTCGYIAPELAYTMRANEKCDVFNF 965
+++ V DFG A+ + ++ ++ A GT Y++PE A + + DV++
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 966 GVLVLEVIEGKHP 978
G ++ EV+ G+ P
Sbjct: 223 GCVLYEVLTGEPP 235
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + LV E E G L L + + ++ V+ + Y+
Sbjct: 68 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEE 123
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPE 949
F +HRD++++ VLL ++ A +SDFG +K L+ D + + A T G + APE
Sbjct: 124 SNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPE 178
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + K DV++FGVL+ E G+ P
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + LV E E G L L + + ++ V+ + Y+
Sbjct: 80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEE 135
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPE 949
F +HRD++++ VLL ++ A +SDFG +K L+ D + + A T G + APE
Sbjct: 136 SNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPE 190
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + K DV++FGVL+ E G+ P
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + LV E E G L L + + ++ V+ + Y+
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEE 145
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPE 949
F +HRD++++ VLL ++ A +SDFG +K L+ D + + A T G + APE
Sbjct: 146 SNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPE 200
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + K DV++FGVL+ E G+ P
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + LV E E G L L + + ++ V+ + Y+
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEE 145
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPE 949
F +HRD++++ VLL ++ A +SDFG +K L+ D + + A T G + APE
Sbjct: 146 SNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPE 200
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + K DV++FGVL+ E G+ P
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + LV E E G L L + + ++ V+ + Y+
Sbjct: 70 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEE 125
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPE 949
F +HRD++++ VLL ++ A +SDFG +K L+ D + + A T G + APE
Sbjct: 126 SNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPE 180
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + K DV++FGVL+ E G+ P
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + LV E E G L L + + ++ V+ + Y+
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEE 129
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPE 949
F +HRD++++ VLL ++ A +SDFG +K L+ D + + A T G + APE
Sbjct: 130 SNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPE 184
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + K DV++FGVL+ E G+ P
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVKKL + + F EI ++H NIVK+ G C + ++L L+ E
Sbjct: 39 TGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 94
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
YL GSL L + +D K + + + Y+ + +HR+++++ +L++
Sbjct: 95 YLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRNLATRNILVE 149
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
E + + DFG K L D + + APE + + DV++FGV++
Sbjct: 150 NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 209
Query: 971 EVI 973
E+
Sbjct: 210 ELF 212
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 849 FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSK 908
++V EY++ +L I+ E + + VI AL++ H + I+HRD+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 909 KVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA---GTCGYIAPELAYTMRANEKCDVFNF 965
+++ V DFG A+ + ++ ++ A GT Y++PE A + + DV++
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 966 GVLVLEVIEGKHP 978
G ++ EV+ G+ P
Sbjct: 206 GCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 849 FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSK 908
++V EY++ +L I+ E + + VI AL++ H + I+HRD+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 909 KVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA---GTCGYIAPELAYTMRANEKCDVFNF 965
+++ V DFG A+ + ++ ++ A GT Y++PE A + + DV++
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 966 GVLVLEVIEGKHP 978
G ++ EV+ G+ P
Sbjct: 206 GCVLYEVLTGEPP 218
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 31 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 86
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + Y+
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 141
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT-----CGYIA 947
F +HRD++++ +LD ++ V+DFG A+ + D +S T ++A
Sbjct: 142 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPVKWMA 197
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 38/213 (17%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI-----TEIRHRNIVKFY 839
G G G V++ G+ AVK S ++K + E +RH NI+ F
Sbjct: 46 GKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFI 97
Query: 840 GFCSHTQH----LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHD 895
++H L+L+ Y E GSL L LD + ++ +A+ L+++H +
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 896 CF-----PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL-----AGTCGY 945
F P I HRD+ SK +L+ + ++D G A + S+N ++ GT Y
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRY 212
Query: 946 IAPE-LAYTMRAN-----EKCDVFNFGVLVLEV 972
+APE L T++ + ++ D++ FG+++ EV
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 154/365 (42%), Gaps = 52/365 (14%)
Query: 44 ISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELAL 103
+ +L+ L ++FS NQ + I P + LT LV + ++ NQ+ + P L LT+L L L
Sbjct: 64 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119
Query: 104 SYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLISPHYGSIPQD---LGNLES 160
N++ P + L +G+ D L NL +
Sbjct: 120 FNNQITDIDPLKNLTNLNRLELSSNTISDISAL-SGLTSLQQLSFGNQVTDLKPLANLTT 178
Query: 161 PVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLS 220
+ + +N S + L L NL + NN+I P +G L +L L LN NQL
Sbjct: 179 LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234
Query: 221 GSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSS 280
T +L+NL L L +N++S P L L L L NQ++ P L++
Sbjct: 235 D--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTA 288
Query: 281 LKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIP------------------- 321
L +L + N N+L P I NLK+L++L L +S P
Sbjct: 289 LTNLEL-NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 345
Query: 322 -PSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLS--------VN-KLNGSIPHC 371
SL NL+NI L N + P L L ++QL L+ VN K N SIP+
Sbjct: 346 VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNT 403
Query: 372 LGNLS 376
+ N++
Sbjct: 404 VKNVT 408
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 128/286 (44%), Gaps = 71/286 (24%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLD---FSTNQFSGIIPPQIGILTNLVVLRLSVNQLN 85
LD+S N++ + IS L+KL +L+ + NQ S I P +GILTNL L L+ NQL
Sbjct: 182 LDISSNKV-----SDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234
Query: 86 GLIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLIS 145
+ L LT+L +L L+ N+++ P
Sbjct: 235 DI--GTLASLTNLTDLDLANNQISNLAP-------------------------------- 260
Query: 146 PHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGN 205
L L + L N S + P L GL LT + LN N++ P I N
Sbjct: 261 ---------LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 307
Query: 206 LRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHN 265
L++L+YL L N +S P +L+ L+ L+ ++N++S L + ++ +L HN
Sbjct: 308 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHN 363
Query: 266 QLNGSLPSSFGNLSSLKHLHVHN-------IN-KLSGSIPKEIGNL 303
Q++ P NL+ + L +++ +N K + SIP + N+
Sbjct: 364 QISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 407
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 139/337 (41%), Gaps = 74/337 (21%)
Query: 347 ELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYL 406
+L ++ +L L + ++G L NL+ + F N+L+ P ++N+ KL L
Sbjct: 44 DLDQVTTLQADRLGIKSIDGV--EYLNNLTQINF---SNNQLTDITP--LKNLTKLVDIL 96
Query: 407 LFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISE 466
+ NQ P + +LT ++ NN P L+N T+L L L N ++ +IS
Sbjct: 97 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISA 151
Query: 467 VFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526
+ G+ QL+ GN+++ P + N+T L +LD
Sbjct: 152 LSGLT----------------------SLQQLS----FGNQVTDLKP--LANLTTLERLD 183
Query: 527 FSSNRLVGQIPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXXXXXXXXSANRLSKLIPK 586
SSN++ DI + N++S + P
Sbjct: 184 ISSNKV-------------------------SDI-SVLAKLTNLESLIATNNQISDITP- 216
Query: 587 NLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMN 646
LG L L L+L+ NQ ++I + L L+ LDL++N + P + L L +
Sbjct: 217 -LGILTNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 271
Query: 647 LLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683
L N++S P + L++++++ N+L+ P S
Sbjct: 272 LGANQISNISP--LAGLTALTNLELNENQLEDISPIS 306
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + LV E E G L L + + ++ V+ + Y+
Sbjct: 88 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEE 143
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPE 949
F +HRD++++ VLL ++ A +SDFG +K L+ D + + A T G + APE
Sbjct: 144 SNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPE 198
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + K DV++FGVL+ E G+ P
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 25/263 (9%)
Query: 787 GGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ 846
G G VYKA+ A K+ + E + + + H NIVK +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 847 HLFLVYEYLERGSL-ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDI 905
+L+++ E+ G++ A +L E E S+ V K +AL+Y+H + I+HRD+
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTE---SQIQVVCKQTLDALNYLHDN---KIIHRDL 134
Query: 906 SSKKVLLDLEYKAHVSDFG-TAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE-----K 959
+ +L L+ ++DFG +AK + GT ++APE+ + + K
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 194
Query: 960 CDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKLK 1019
DV++ G+ ++E+ E + P H M +++ I PP L +
Sbjct: 195 ADVWSLGITLIEMAEIEPPHH----------ELNPMRVLLK--IAKSEPPTLAQPSRWSS 242
Query: 1020 SMIAVAFLCLDANPDCRPTMQKV 1042
+ CL+ N D R T ++
Sbjct: 243 NFKDFLKKCLEKNVDARWTTSQL 265
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 39 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 94
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + Y+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 149
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT-----CGYIA 947
F +HRD++++ +LD ++ V+DFG A+ + D +S T ++A
Sbjct: 150 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPVKWMA 205
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 36 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 91
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + Y+
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 146
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT-----CGYIA 947
F +HRD++++ +LD ++ V+DFG A+ + D +S T ++A
Sbjct: 147 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPVKWMA 202
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 154/365 (42%), Gaps = 52/365 (14%)
Query: 44 ISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELAL 103
+ +L+ L ++FS NQ + I P + LT LV + ++ NQ+ + P L LT+L L L
Sbjct: 63 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 118
Query: 104 SYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLISPHYGSIPQD---LGNLES 160
N++ P + L +G+ D L NL +
Sbjct: 119 FNNQITDIDPLKNLTNLNRLELSSNTISDISAL-SGLTSLQQLSFGNQVTDLKPLANLTT 177
Query: 161 PVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLS 220
+ + +N S + L L NL + NN+I P +G L +L L LN NQL
Sbjct: 178 LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 233
Query: 221 GSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSS 280
T +L+NL L L +N++S P L L L L NQ++ P L++
Sbjct: 234 D--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTA 287
Query: 281 LKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIP------------------- 321
L +L + N N+L P I NLK+L++L L +S P
Sbjct: 288 LTNLEL-NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSD 344
Query: 322 -PSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLS--------VN-KLNGSIPHC 371
SL NL+NI L N + P L L ++QL L+ VN K N SIP+
Sbjct: 345 VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNT 402
Query: 372 LGNLS 376
+ N++
Sbjct: 403 VKNVT 407
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 71/286 (24%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLD---FSTNQFSGIIPPQIGILTNLVVLRLSVNQLN 85
LD+S N++ + IS L+KL +L+ + NQ S I P +GILTNL L L+ NQL
Sbjct: 181 LDISSNKV-----SDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 233
Query: 86 GLIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLIS 145
+ L LT+L +L L+ N+++ P
Sbjct: 234 DI--GTLASLTNLTDLDLANNQISNLAP-------------------------------- 259
Query: 146 PHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGN 205
L L + L N S + P L GL LT + LN N++ P I N
Sbjct: 260 ---------LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 306
Query: 206 LRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHN 265
L++L+YL L N +S P +L+ L+ L+ +N++S L + ++ +L HN
Sbjct: 307 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHN 362
Query: 266 QLNGSLPSSFGNLSSLKHLHVHN-------IN-KLSGSIPKEIGNL 303
Q++ P NL+ + L +++ +N K + SIP + N+
Sbjct: 363 QISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 406
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 139/337 (41%), Gaps = 74/337 (21%)
Query: 347 ELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYL 406
+L ++ +L L + ++G L NL+ + F N+L+ P ++N+ KL L
Sbjct: 43 DLDQVTTLQADRLGIKSIDGV--EYLNNLTQINF---SNNQLTDITP--LKNLTKLVDIL 95
Query: 407 LFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISE 466
+ NQ P + +LT ++ NN P L+N T+L L L N ++ +IS
Sbjct: 96 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISA 150
Query: 467 VFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526
+ G+ QL+ GN+++ P + N+T L +LD
Sbjct: 151 LSGLT----------------------SLQQLS----FGNQVTDLKP--LANLTTLERLD 182
Query: 527 FSSNRLVGQIPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXXXXXXXXSANRLSKLIPK 586
SSN++ DI + N++S + P
Sbjct: 183 ISSNKV-------------------------SDI-SVLAKLTNLESLIATNNQISDITP- 215
Query: 587 NLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMN 646
LG L L L+L+ NQ ++I + L L+ LDL++N + P + L L +
Sbjct: 216 -LGILTNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 270
Query: 647 LLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683
L N++S P + L++++++ N+L+ P S
Sbjct: 271 LGANQISNISP--LAGLTALTNLELNENQLEDISPIS 305
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 122/270 (45%), Gaps = 35/270 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ A AVK ++ G + + + F++E + ++H +VK +
Sbjct: 24 GAGQFGEVWMATYNKHTKVAVK---TMKPGSMSV--EAFLAEANVMKTLQHDKLVKLHAV 78
Query: 842 CSHTQHLFLVYEYLERGSLATIL-SNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ + ++++ E++ +GSL L S+E + L K ++ +A ++++ +
Sbjct: 79 VT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY--- 132
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG-TCGYIAPELAYTMRANEK 959
+HRD+ + +L+ ++DFG A+ ++ + E A + APE K
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 960 CDVFNFGVLVLEVIE-GK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEE 1016
DV++FG+L++E++ G+ +PG N ++ R+P P EE
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPG------------MSNPEVIRALERGYRMPRPENCPEE 240
Query: 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
M+ C P+ RPT + + ++L
Sbjct: 241 LYNIMMR----CWKNRPEERPTFEYIQSVL 266
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 783 LHGTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKF 838
L G G G V K +G A+KK L + + + +K + EI ++RH N+V
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKF--LESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 839 YGFCSHTQHLFLVYEYLERGSLATILSN-EATAAELDWSKRVNVIKGVANALSYMH-HDC 896
C + +LV+E+++ TIL + E LD+ + + N + + H H+
Sbjct: 90 LEVCKKKKRWYLVFEFVDH----TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN- 144
Query: 897 FPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAY-TMR 955
I+HRDI + +L+ + DFG A+ L + + T Y APEL ++
Sbjct: 145 ---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 956 ANEKCDVFNFGVLVLEVIEGK 976
+ DV+ G LV E+ G+
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGE 222
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 34 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 89
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + Y+
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 144
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT-----CGYIA 947
F +HRD++++ +LD ++ V+DFG A+ + D +S T ++A
Sbjct: 145 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPVKWMA 200
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 37 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 92
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + Y+
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 147
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT-----CGYIA 947
F +HRD++++ +LD ++ V+DFG A+ + D +S T ++A
Sbjct: 148 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPVKWMA 203
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 38 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 93
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + Y+
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 148
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS----NWSELAGTCGYIAP 948
F +HRD++++ +LD ++ V+DFG A+ + N + ++A
Sbjct: 149 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 949 ELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 38 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 93
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + Y+
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 148
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT-----CGYIA 947
F +HRD++++ +LD ++ V+DFG A+ + D +S T ++A
Sbjct: 149 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPVKWMA 204
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 39 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 94
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + Y+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 149
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT-----CGYIA 947
F +HRD++++ +LD ++ V+DFG A+ + D +S T ++A
Sbjct: 150 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPVKWMA 205
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide
Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 40/235 (17%)
Query: 831 RHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELD---------WSKR--V 879
+H NIV G C+H + ++ EY G L L ++ E D S R +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ VA ++++ +C +HRD++++ VLL + A + DFG A+ + DS+ +
Sbjct: 168 HFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 939 LAG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXX 993
++APE + + DV+++G+L+ E+ +PG
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG-------------- 269
Query: 994 NMNIVVNDLIDSRLPPPLGEVEEKL--KSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
I+VN + + K++ ++ C P RPT Q++C+ L
Sbjct: 270 ---ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V + ++ H NI+K + + ++V E G L + +E D ++ +IK
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIK 128
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWSELA 940
V + ++YMH I+HRD+ + +LL+ + K + DFG + + ++ +
Sbjct: 129 QVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRI 184
Query: 941 GTCGYIAPELAYTMRA--NEKCDVFNFGVLVLEVIEGKHP 978
GT YIAPE+ +R +EKCDV++ GV++ ++ G P
Sbjct: 185 GTAYYIAPEV---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 39/215 (18%)
Query: 785 GTGGCGTVYKAELTSGDTR---AVKKLHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V KA + R A+K++ + + + + F E+ + H NI+
Sbjct: 31 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCKLGHHPNIIN 87
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNE-------------ATAAELDWSKRVNVIKG 884
G C H +L+L EY G+L L +TA+ L + ++
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG 944
VA + Y+ F +HR+++++ +L+ Y A ++DFG ++ + T G
Sbjct: 148 VARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMG 198
Query: 945 -----YIAPE-LAYTMRANEKCDVFNFGVLVLEVI 973
++A E L Y++ DV+++GVL+ E++
Sbjct: 199 RLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 232
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIR-HRN-----IVK 837
G GG Y E+T DT+ V +P + +QK +S TEI H++ +V
Sbjct: 51 GKGGFAKCY--EITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--TEIAIHKSLDNPHVVG 106
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNE--ATAAELDWSKRVNVIKGVANALSYMHHD 895
F+GF +++V E R SL + T E + R I+GV Y+H++
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN 161
Query: 896 CFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR 955
++HRD+ + L+ + + DFG A ++ D L GT YIAPE+
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 956 ANEKCDVFNFGVLVLEVIEGKHP 978
+ + D+++ G ++ ++ GK P
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIR-HRN-----IVK 837
G GG Y E+T DT+ V +P + +QK +S TEI H++ +V
Sbjct: 51 GKGGFAKCY--EITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--TEIAIHKSLDNPHVVG 106
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNE--ATAAELDWSKRVNVIKGVANALSYMHHD 895
F+GF +++V E R SL + T E + R I+GV Y+H++
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN 161
Query: 896 CFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR 955
++HRD+ + L+ + + DFG A ++ D L GT YIAPE+
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 956 ANEKCDVFNFGVLVLEVIEGKHP 978
+ + D+++ G ++ ++ GK P
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 830 IRHRNIVKFYGFCSHTQH----LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGV 885
+RH NI+ F ++H L+L+ Y E GSL L LD + ++ +
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSI 114
Query: 886 ANALSYMHHDCF-----PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA 940
A+ L+++H + F P I HRD+ SK +L+ + ++D G A + S+N ++
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVG 173
Query: 941 -----GTCGYIAPE-LAYTMRAN-----EKCDVFNFGVLVLEV 972
GT Y+APE L T++ + ++ D++ FG+++ EV
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 830 IRHRNIVKFYGFCSHTQH----LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGV 885
+RH NI+ F ++H L+L+ Y E GSL L LD + ++ +
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSI 114
Query: 886 ANALSYMHHDCF-----PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA 940
A+ L+++H + F P I HRD+ SK +L+ + ++D G A + S+N ++
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVG 173
Query: 941 -----GTCGYIAPE-LAYTMRAN-----EKCDVFNFGVLVLEV 972
GT Y+APE L T++ + ++ D++ FG+++ EV
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 117
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 118 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T E + VSE+ ++ H
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEE---DLSDLVSEMEMMKMIGKH 100
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L N ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN-VIKGVANA 888
+ H N+VKFYG +L EY G L + + E D + + ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYI 946
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + E DV++ G+++ ++ G+ P
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRN---IVKFYGF 841
G G G V+K +KL L NQ + E+ + N IV FYG
Sbjct: 18 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNSPYIVGFYGA 75
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK-RVNVIKGVANALSYMHHDCFPPI 900
+ + E+++ GSL +L E K + VIKG L+Y+ I
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTYLREK--HKI 129
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
+HRD+ +L++ + + DFG + L + +N E GT Y++PE + +
Sbjct: 130 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPERLQGTHYSVQS 187
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ G+ ++E+ G++P
Sbjct: 188 DIWSMGLSLVEMAVGRYP 205
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 22/202 (10%)
Query: 785 GTGGCGTVYKAELT-----SGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIV 836
G G G+V +G+ AVKKL + + F EI ++H NIV
Sbjct: 22 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNIV 77
Query: 837 KFYGFC--SHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
K+ G C + ++L L+ E+L GSL L + +D K + + + Y+
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL---AGTCGYIAPELA 951
+ +HRD++++ +L++ E + + DFG K L D + APE
Sbjct: 136 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 952 YTMRANEKCDVFNFGVLVLEVI 973
+ + DV++FGV++ E+
Sbjct: 193 TESKFSVASDVWSFGVVLYELF 214
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHT--QHLFLVYEYLE 856
+G+ AVK L G + K + + + H NIVK+ G C+ + L+ E+L
Sbjct: 37 TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 96
Query: 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY 916
GSL L L +++ + + Y+ + +HRD++++ VL++ E+
Sbjct: 97 SGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVESEH 151
Query: 917 KAHVSDFGTAKFLKPDSSNWS---ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
+ + DFG K ++ D + + + APE + DV++FGV + E++
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 47/266 (17%)
Query: 804 AVKKLHSLPTGEIGINQKGFVSEITEI----RHRNIVKFYGFCSHTQHLFLVYEYLERGS 859
AVK L S + ++ +SE+ + +H NIV G C+H + ++ EY G
Sbjct: 80 AVKMLKSTAHAD---EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 860 LATILSNEATAAELD---------WSKR--VNVIKGVANALSYM-HHDCFPPILHRDISS 907
L L ++ E D S R ++ VA ++++ +C +HRD+++
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAA 192
Query: 908 KKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT--CGYIAPELAYTMRANEKCDVFNF 965
+ VLL + A + DFG A+ + DS+ + ++APE + + DV+++
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 966 GVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKL--KS 1020
G+L+ E+ +PG I+VN + + K+
Sbjct: 253 GILLWEIFSLGLNPYPG-----------------ILVNSKFYKLVKDGYQMAQPAFAPKN 295
Query: 1021 MIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ ++ C P RPT Q++C+ L
Sbjct: 296 IYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHT--QHLFLVYEYLE 856
+G+ AVK L G + K + + + H NIVK+ G C+ + L+ E+L
Sbjct: 49 TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108
Query: 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY 916
GSL L L +++ + + Y+ + +HRD++++ VL++ E+
Sbjct: 109 SGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVESEH 163
Query: 917 KAHVSDFGTAKFLKPDSSNWS---ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
+ + DFG K ++ D + + + APE + DV++FGV + E++
Sbjct: 164 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 21/229 (9%)
Query: 759 SQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGI 818
S++ + NN + + + F MVL G G G V A D + ++L+++ + +
Sbjct: 3 SEDRKQPSNNLDRVKLTDFNFLMVL-GKGSFGKVMLA-----DRKGTEELYAIKILKKDV 56
Query: 819 NQKGFVSEITEIRHRNIV---------KFYGFCSHTQHLFLVYEYLERGSLATILSNEAT 869
+ E T + R + + + L+ V EY+ G L +
Sbjct: 57 VIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK 116
Query: 870 AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL 929
E + V ++ L ++H I++RD+ V+LD E ++DFG K
Sbjct: 117 FKE---PQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH 170
Query: 930 KPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
D E GT YIAPE+ + D + +GVL+ E++ G+ P
Sbjct: 171 MMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSY 891
H NI++ FLV++ +++G L L+ + T +E + K + + V AL
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 892 MHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-L 950
++ I+HRD+ + +LLD + ++DFG + L P + GT Y+APE +
Sbjct: 143 LN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLRSVCGTPSYLAPEII 195
Query: 951 AYTMRAN-----EKCDVFNFGVLVLEVIEGKHP 978
+M N ++ D+++ GV++ ++ G P
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 118/269 (43%), Gaps = 43/269 (15%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE---ITEIRHRNIVKFYGF 841
G G G V+ A AVK ++ G + + + F++E + ++H +VK +
Sbjct: 191 GAGQFGEVWMATYNKHTKVAVK---TMKPGSMSV--EAFLAEANVMKTLQHDKLVKLHAV 245
Query: 842 CSHTQHLFLVYEYLERGSLATIL-SNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ + ++++ E++ +GSL L S+E + L K ++ +A ++++ +
Sbjct: 246 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY--- 299
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
+HRD+ + +L+ ++DFG A+ W+ APE K
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT---------APEAINFGSFTIKS 350
Query: 961 DVFNFGVLVLEVIE-GK--HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEK 1017
DV++FG+L++E++ G+ +PG N ++ R+P P EE
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPG------------MSNPEVIRALERGYRMPRPENCPEE- 397
Query: 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ + C P+ RPT + + ++L
Sbjct: 398 ---LYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 90 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 146
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L N ++ + V
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 207 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 258
Query: 939 LAGT------CGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 259 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 26/206 (12%)
Query: 787 GGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ 846
G G V+KA+L + D AVK + L + +++ S ++H N+++F
Sbjct: 26 GRFGCVWKAQLMN-DFVAVK-IFPLQDKQSWQSEREIFS-TPGMKHENLLQFIAAEKRGS 82
Query: 847 HL----FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC------ 896
+L +L+ + ++GSL L + W++ +V + ++ LSY+H D
Sbjct: 83 NLEVELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 897 --FPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPE--- 949
P I HRD SK VLL + A ++DFG A +P + GT Y+APE
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLE 198
Query: 950 --LAYTMRANEKCDVFNFGVLVLEVI 973
+ + A + D++ G+++ E++
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 28/210 (13%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 40 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 95
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + ++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 150
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK-FLKPDSSNWSELAGT---CGYIAP 948
F +HRD++++ +LD ++ V+DFG A+ L + + G ++A
Sbjct: 151 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 949 ELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+ H NIVK + + L+LV EY G + L E + + + + +A+
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAV 126
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE 949
Y H I+HRD+ ++ +LLD + ++DFG + + E G+ Y APE
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDEFCGSPPYAAPE 182
Query: 950 LAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
L + + + DV++ GV++ ++ G P
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 10/193 (5%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
L+LV+E+L + + ++ T L K + + + LS+ H +L
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLSFCHSH---RVL 125
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANEKC 960
HRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 961 DVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 100
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L N ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDX 212
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 100
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L N ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDX 212
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 100
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L N ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 213 YKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVK--KLHSLP-TGEIGINQKGFVSEITEIRHRNIVKFYG 840
G G TVYK T+G A+K KL S T I + +S + E++H NIV+ Y
Sbjct: 14 GNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIRE---ISLMKELKHENIVRLYD 70
Query: 841 FCSHTQHLFLVYEY----LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC 896
L LV+E+ L++ + + N EL+ K + L++ H +
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW--QLLQGLAFCHEN- 127
Query: 897 FPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRA 956
ILHRD+ + +L++ + + DFG A+ + +S T Y AP++ R
Sbjct: 128 --KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRT 185
Query: 957 -NEKCDVFNFGVLVLEVIEGK 976
+ D+++ G ++ E+I GK
Sbjct: 186 YSTSIDIWSCGCILAEMITGK 206
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAE----LDWSKRVNVI 882
I + H +IV+ G C + L LV +YL GSL + A L+W ++
Sbjct: 69 IGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI--- 124
Query: 883 KGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELA 940
A + Y+ ++HR+++++ VLL + V+DFG A L PD +SE
Sbjct: 125 ---AKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
++A E + + + DV+++GV V E++ G P
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 123
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 183
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
GTGG G V + +G+ A+K+ + + N++ + EI ++ H N+V
Sbjct: 23 GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK---NRERWCLEIQIMKKLNHPNVVSARE 79
Query: 841 FCSHTQHL------FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
Q L L EY E G L L+ L ++ +++AL Y+H
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 895 DCFPPILHRDISSKKVLLD-----LEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE 949
+ I+HRD+ + ++L L +K + D G AK L +E GT Y+APE
Sbjct: 140 N---RIIHRDLKPENIVLQPGPQRLIHK--IIDLGYAKELD-QGELCTEFVGTLQYLAPE 193
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
L + D ++FG L E I G P
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
GTGG G V + +G+ A+K+ + + N++ + EI ++ H N+V
Sbjct: 24 GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK---NRERWCLEIQIMKKLNHPNVVSARE 80
Query: 841 FCSHTQHL------FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
Q L L EY E G L L+ L ++ +++AL Y+H
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 895 DCFPPILHRDISSKKVLLD-----LEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE 949
+ I+HRD+ + ++L L +K + D G AK L +E GT Y+APE
Sbjct: 141 N---RIIHRDLKPENIVLQPGPQRLIHK--IIDLGYAKELD-QGELCTEFVGTLQYLAPE 194
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
L + D ++FG L E I G P
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 98 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 153
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + ++
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 208
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL---KPDS-SNWSELAGTCGYIAP 948
F +HRD++++ +LD ++ V+DFG A+ + + DS N + ++A
Sbjct: 209 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 949 ELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 100
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L N ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLAR----DINNIDY 212
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 123
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 16 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 75 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 127
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 187
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 188 AVDIWSLGCIFAEMV 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 122
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 122
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 847 HLFLVYEYLERGSLATILSNEATAAELDWSK-RVNVIKGVANALSYMHHDCFPPILHRDI 905
HL+LV +Y G L T+LS D ++ + + +++ +H+ +HRDI
Sbjct: 164 HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY------VHRDI 217
Query: 906 SSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA-GTCGYIAPELAYTM-----RANEK 959
VLLD+ ++DFG+ + D + S +A GT YI+PE+ M + +
Sbjct: 218 KPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPE 277
Query: 960 CDVFNFGVLVLEVIEGKHP 978
CD ++ GV + E++ G+ P
Sbjct: 278 CDWWSLGVCMYEMLYGETP 296
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 19 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 78 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 130
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 190
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 191 AVDIWSLGCIFAEMV 205
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAA---ELDWSKRVNVIKGVANALSYMHHDCFP 898
L+LV+E+L + L T + A L S +++G+A S+
Sbjct: 74 IHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------ 126
Query: 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-AN 957
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 127 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 958 EKCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 186 TAVDIWSLGCIFAEMV 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 123
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 124
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 184
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 185 AVDIWSLGCIFAEMV 199
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 44 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 99
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + ++
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 154
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL---KPDS-SNWSELAGTCGYIAP 948
F +HRD++++ +LD ++ V+DFG A+ + + DS N + ++A
Sbjct: 155 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 949 ELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAE----LDWSKRVNVI 882
I + H +IV+ G C + L LV +YL GSL + A L+W ++
Sbjct: 87 IGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI--- 142
Query: 883 KGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELA 940
A + Y+ ++HR+++++ VLL + V+DFG A L PD +SE
Sbjct: 143 ---AKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 196
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
++A E + + + DV+++GV V E++ G P
Sbjct: 197 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 40 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 95
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + ++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 150
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL---KPDS-SNWSELAGTCGYIAP 948
F +HRD++++ +LD ++ V+DFG A+ + + DS N + ++A
Sbjct: 151 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 949 ELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 847 HLFLVYEYLERGSLATILSNEATAAELDWSK-RVNVIKGVANALSYMHHDCFPPILHRDI 905
HL+LV +Y G L T+LS D ++ + + +++ +H+ +HRDI
Sbjct: 148 HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY------VHRDI 201
Query: 906 SSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA-GTCGYIAPELAYTM-----RANEK 959
VLLD+ ++DFG+ + D + S +A GT YI+PE+ M + +
Sbjct: 202 KPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPE 261
Query: 960 CDVFNFGVLVLEVIEGKHP 978
CD ++ GV + E++ G+ P
Sbjct: 262 CDWWSLGVCMYEMLYGETP 280
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
++H NIV+ + S +LV++ + G L + +E D S + I + ++
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIHQILESV 143
Query: 890 SYMH-HDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWSELAGTCGY 945
+++H HD I+HRD+ + +LL + K ++DFG A ++ + W AGT GY
Sbjct: 144 NHIHQHD----IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGY 199
Query: 946 IAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++PE+ + D++ GV++ ++ G P
Sbjct: 200 LSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 19 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 78 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 130
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 190
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 191 AVDIWSLGCIFAEMV 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 17/222 (7%)
Query: 758 DSQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIG 817
D + ND + +LL TF GK++L G Y ++ + K + E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTF-GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 818 INQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK 877
+ Q +T ++ Y F +H + F V EY G L LS E E +
Sbjct: 63 VLQNTRHPFLTALK-------YAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----E 110
Query: 878 RVNVIKG-VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
R + +AL Y+H +++RDI + ++LD + ++DFG K D +
Sbjct: 111 RARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 167
Query: 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT Y+APE+ D + GV++ E++ G+ P
Sbjct: 168 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 100
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L N ++ + V
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 796 ELTSGDTRAVKKLHSLPTGEIG----INQKGFVSEITE-----------IRHRNIVKFYG 840
EL G V++ +PTG+ IN K + + ++H NIV+ +
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
S +LV++ + G L + +E D S + I L ++H I
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI------LESVNHCHLNGI 124
Query: 901 LHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRAN 957
+HRD+ + +LL + K ++DFG A ++ D W AGT GY++PE+
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 958 EKCDVFNFGVLVLEVIEGKHP 978
+ D++ GV++ ++ G P
Sbjct: 185 KPVDMWACGVILYILLVGYPP 205
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 796 ELTSGDTRAVKKLHSLPTGEIG----INQKGFVSEITE-----------IRHRNIVKFYG 840
EL G V++ +PTG+ IN K + + ++H NIV+ +
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
S +LV++ + G L + +E D S + I L ++H I
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI------LESVNHCHLNGI 124
Query: 901 LHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRAN 957
+HRD+ + +LL + K ++DFG A ++ D W AGT GY++PE+
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 958 EKCDVFNFGVLVLEVIEGKHP 978
+ D++ GV++ ++ G P
Sbjct: 185 KPVDMWACGVILYILLVGYPP 205
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 100
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L N ++ + V
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 39 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 94
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + ++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 149
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL---KPDS-SNWSELAGTCGYIAP 948
F +HRD++++ +LD ++ V+DFG A+ + + DS N + ++A
Sbjct: 150 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 949 ELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 37 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 92
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + ++
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 147
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL---KPDS-SNWSELAGTCGYIAP 948
F +HRD++++ +LD ++ V+DFG A+ + + DS N + ++A
Sbjct: 148 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 949 ELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 785 GTGGCGTVYKAELTSGDTR----AVKKLHSLP-TGEIGINQKGFVSE---ITEIRHRNIV 836
G G G VY L D + AVK L+ + GE+ F++E + + H N++
Sbjct: 39 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSHPNVL 94
Query: 837 KFYGFCSHTQ-HLFLVYEYLERGSLATILSNEA---TAAELDWSKRVNVIKGVANALSYM 892
G C ++ +V Y++ G L + NE T +L + VA + ++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 149
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL---KPDS-SNWSELAGTCGYIAP 948
F +HRD++++ +LD ++ V+DFG A+ + + DS N + ++A
Sbjct: 150 ASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 949 ELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E T + K DV++FGVL+ E++ P
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
++H NIV+ + S +LV++ + G L + +E D S + I+ + A+
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAV 116
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWSELAGTCGYI 946
+ H ++HRD+ + +LL + K ++DFG A ++ D W AGT GY+
Sbjct: 117 LHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 947 APELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+PE+ + D++ GV++ ++ G P
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 17/234 (7%)
Query: 749 FNFRRRKRTDSQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKL 808
++RKR ++ Q + L FE K+ G G G V+K +KL
Sbjct: 1 MTLQQRKRLEAFLTQKQKVGE--LKDDDFE-KISELGAGNGGVVFKVSHKPSGLVMARKL 57
Query: 809 HSLPTGEIGINQKGFVSEITEIRHRN---IVKFYGFCSHTQHLFLVYEYLERGSLATILS 865
L NQ + E+ + N IV FYG + + E+++ GSL +L
Sbjct: 58 IHLEIKPAIRNQ--IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 115
Query: 866 NEATAAELDWSK-RVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFG 924
E K + VIKG L+Y+ I+HRD+ +L++ + + DFG
Sbjct: 116 KAGRIPEQILGKVSIAVIKG----LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFG 169
Query: 925 TAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ L +N GT Y++PE + + D+++ G+ ++E+ G++P
Sbjct: 170 VSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+ H NIVK + + L+LV EY G + L E + + + + +A+
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAV 126
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG---YI 946
Y H I+HRD+ ++ +LLD + ++DFG + + + ++L CG Y
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDAFCGAPPYA 179
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + + + DV++ GV++ ++ G P
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRV--NVIKGVANAL 889
H N+VKFYG +L EY G L + + E D ++R ++ GV
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV--- 119
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYIA 947
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+A
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 948 PELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
PEL + E DV++ G+++ ++ G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRV--NVIKGVANAL 889
H N+VKFYG +L EY G L + + E D ++R ++ GV
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV--- 118
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYIA 947
Y+H I HRDI + +LLD +SDFG A + ++ +++ GT Y+A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 948 PELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
PEL + E DV++ G+++ ++ G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 16/196 (8%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAA---ELDWSKRVNVIKGVANALSYMHHDCFP 898
L+LV+E++ + L T + A L S +++G+A S+
Sbjct: 70 IHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------ 122
Query: 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-AN 957
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 123 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 958 EKCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 182 TAVDIWSLGCIFAEMV 197
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 123
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
++H NIV+ + S H +L+++ + G L + +E D S + I+ + A+
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAV 134
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWSELAGTCGYI 946
+ H ++HRD+ + +LL + K ++DFG A ++ + W AGT GY+
Sbjct: 135 LHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYL 191
Query: 947 APELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+PE+ + D++ GV++ ++ G P
Sbjct: 192 SPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+ H NIVK + + L+LV EY G + L E + + + + +A+
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK---FRQIVSAV 126
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG---YI 946
Y H I+HRD+ ++ +LLD + ++DFG + + + ++L CG Y
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSN----EFTFGNKLDAFCGAPPYA 179
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + + + DV++ GV++ ++ G P
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 122
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 122
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+ H NIVK + + L+L+ EY G + L E + + + + +A+
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK---FRQIVSAV 127
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG---YI 946
Y H I+HRD+ ++ +LLD + ++DFG + + + +L CG Y
Sbjct: 128 QYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSN----EFTVGGKLDAFCGAPPYA 180
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + + + DV++ GV++ ++ G P
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 123
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 123
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 123
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 124
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 185 AVDIWSLGCIFAEMV 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 124
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 185 AVDIWSLGCIFAEMV 199
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 74 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 126
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 187 AVDIWSLGCIFAEMV 201
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 20/224 (8%)
Query: 758 DSQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKK--LHSLPTGE 815
D + N+ +LL TF GK++L G Y ++ + K H+L
Sbjct: 4 DPRVTMNEFEYLKLLGKGTF-GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 62
Query: 816 IGINQKGFVSEITEIRHRNIVKF-YGFCSHTQHLFLVYEYLERGSLATILSNEATAAELD 874
+ N RH + Y F +H + F V EY G L LS E +E D
Sbjct: 63 VLQNS----------RHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE-D 110
Query: 875 WSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934
++ + +AL Y+H + +++RD+ + ++LD + ++DFG K D +
Sbjct: 111 RARFYGA--EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 166
Query: 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT Y+APE+ D + GV++ E++ G+ P
Sbjct: 167 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 73 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 125
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 186 AVDIWSLGCIFAEMV 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 17/231 (7%)
Query: 752 RRRKRTDSQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSL 811
++RKR ++ Q + L FE K+ G G G V+K +KL L
Sbjct: 47 QQRKRLEAFLTQKQKVGE--LKDDDFE-KISELGAGNGGVVFKVSHKPSGLVMARKLIHL 103
Query: 812 PTGEIGINQKGFVSEITEIRHRN---IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEA 868
NQ + E+ + N IV FYG + + E+++ GSL +L
Sbjct: 104 EIKPAIRNQ--IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 161
Query: 869 TAAELDWSK-RVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
E K + VIKG L+Y+ I+HRD+ +L++ + + DFG +
Sbjct: 162 RIPEQILGKVSIAVIKG----LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG 215
Query: 928 FLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
L +N GT Y++PE + + D+++ G+ ++E+ G++P
Sbjct: 216 QLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 74 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 126
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 187 AVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 73 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 125
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 186 AVDIWSLGCIFAEMV 200
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 764 NDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF 823
ND + +LL TF GK++L G Y ++ + K + E + Q
Sbjct: 5 NDFDYLKLLGKGTF-GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+T ++ Y F +H + F V EY G L LS E E +R
Sbjct: 64 HPFLTALK-------YAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYG 111
Query: 884 G-VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT 942
+ +AL Y+H +++RDI + ++LD + ++DFG K D + GT
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 943 CGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y+APE+ D + GV++ E++ G+ P
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 764 NDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF 823
ND + +LL TF GK++L G Y ++ + K + E + Q
Sbjct: 5 NDFDYLKLLGKGTF-GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+T ++ Y F +H + F V EY G L LS E E +R
Sbjct: 64 HPFLTALK-------YAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYG 111
Query: 884 G-VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT 942
+ +AL Y+H +++RDI + ++LD + ++DFG K D + GT
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 943 CGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y+APE+ D + GV++ E++ G+ P
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 764 NDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF 823
ND + +LL TF GK++L G Y ++ + K + E + Q
Sbjct: 5 NDFDYLKLLGKGTF-GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+T ++ Y F +H + F V EY G L LS E E +R
Sbjct: 64 HPFLTALK-------YAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYG 111
Query: 884 G-VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT 942
+ +AL Y+H +++RDI + ++LD + ++DFG K D + GT
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 943 CGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y+APE+ D + GV++ E++ G+ P
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 31 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 87
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L N ++ + V
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 148 SCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLAR----DINNIDY 199
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 200 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 124
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 185 AVDIWSLGCIFAEMV 199
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 16 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 75 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 127
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 187
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 188 AVDIWSLGCIFAEMV 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 764 NDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF 823
ND + +LL TF GK++L G Y ++ + K + E + Q
Sbjct: 8 NDFDYLKLLGKGTF-GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+T ++ Y F +H + F V EY G L LS E E +R
Sbjct: 67 HPFLTALK-------YAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYG 114
Query: 884 G-VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT 942
+ +AL Y+H +++RDI + ++LD + ++DFG K D + GT
Sbjct: 115 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 171
Query: 943 CGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y+APE+ D + GV++ E++ G+ P
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 764 NDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF 823
ND + +LL TF GK++L G Y ++ + K + E + Q
Sbjct: 5 NDFDYLKLLGKGTF-GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+T ++ Y F +H + F V EY G L LS E E +R
Sbjct: 64 HPFLTALK-------YAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYG 111
Query: 884 G-VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT 942
+ +AL Y+H +++RDI + ++LD + ++DFG K D + GT
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 168
Query: 943 CGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y+APE+ D + GV++ E++ G+ P
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 764 NDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF 823
ND + +LL TF GK++L G Y ++ + K + E + Q
Sbjct: 5 NDFDYLKLLGKGTF-GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+T ++ Y F +H + F V EY G L LS E E +R
Sbjct: 64 HPFLTALK-------YAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYG 111
Query: 884 G-VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT 942
+ +AL Y+H +++RDI + ++LD + ++DFG K D + GT
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 168
Query: 943 CGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y+APE+ D + GV++ E++ G+ P
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain
Of Csf-1r
Length = 324
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 119/297 (40%), Gaps = 56/297 (18%)
Query: 785 GTGGCGTVYKAELTS-GDTRAVKKL--HSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A G AV K+ L + ++ +SE+ + +H NIV
Sbjct: 40 GAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVN 99
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNEATAA--------------------ELDWSK 877
G C+H + ++ EY G L L +A A L+
Sbjct: 100 LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRD 159
Query: 878 RVNVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
++ VA ++++ +C +HRD++++ VLL + A + DFG A+ + DS+
Sbjct: 160 LLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXX 991
+ ++APE + + DV+++G+L+ E+ +PG
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG------------ 263
Query: 992 XXNMNIVVNDLIDSRLPPPLGEVEEKL--KSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
I+VN + + K++ ++ C P RPT Q++C+ L
Sbjct: 264 -----ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 315
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 36 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 92
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L N ++ + V
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 153 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 204
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 205 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 33 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 89
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L N ++ + V
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 150 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 201
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 202 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 73 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 125
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 186 AVDIWSLGCIFAEMV 200
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 774 ASTFEGKMVLHGTGGCGTVYKA-ELTSGDTRAVKK--LHSLPTGEIGINQKGF--VSEIT 828
A +E K+ G G TVYKA + + A+KK L + GIN+ + +
Sbjct: 9 AKRYE-KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 67
Query: 829 EIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANA 888
E+ H NI+ H ++ LV++++E L I+ + + K ++
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM--TLQG 124
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAP 948
L Y+H ILHRD+ +LLD ++DFG AK + + T Y AP
Sbjct: 125 LEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAP 181
Query: 949 ELAYTMRA-NEKCDVFNFGVLVLEVI 973
EL + R D++ G ++ E++
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRN---IVKFYGF 841
G G G V+K +KL L NQ + E+ + N IV FYG
Sbjct: 15 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNSPYIVGFYGA 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK-RVNVIKGVANALSYMHHDCFPPI 900
+ + E+++ GSL +L E K + VIKG L+Y+ I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTYLREKH--KI 126
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
+HRD+ +L++ + + DFG + L +N GT Y++PE + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQS 184
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 23/166 (13%)
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSY 891
++NI++ F +LV+E L+ GS+ + + E + S+ V++ VA AL +
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR---VVRDVAAALDF 126
Query: 892 MHHDCFPPILHRDISSKKVLLDLEYK---AHVSDFGTAKFLKPDSS----NWSELAGTCG 944
+H I HRD+ + +L + K + DF +K ++S EL CG
Sbjct: 127 LHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 945 ---YIAPEL--AYTMRA---NEKCDVFNFGVLVLEVIEGKHP--GH 980
Y+APE+ +T +A +++CD+++ GV++ ++ G P GH
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH 229
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 71 IHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 123
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 17/231 (7%)
Query: 752 RRRKRTDSQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSL 811
++RKR ++ Q + L FE K+ G G G V+K +KL L
Sbjct: 12 QQRKRLEAFLTQKQKVGE--LKDDDFE-KISELGAGNGGVVFKVSHKPSGLVMARKLIHL 68
Query: 812 PTGEIGINQKGFVSEITEIRHRN---IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEA 868
NQ + E+ + N IV FYG + + E+++ GSL +L
Sbjct: 69 EIKPAIRNQ--IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 126
Query: 869 TAAELDWSK-RVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
E K + VIKG L+Y+ I+HRD+ +L++ + + DFG +
Sbjct: 127 RIPEQILGKVSIAVIKG----LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG 180
Query: 928 FLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
L +N GT Y++PE + + D+++ G+ ++E+ G++P
Sbjct: 181 QLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRN---IVKFYGF 841
G G G V+K +KL L NQ + E+ + N IV FYG
Sbjct: 15 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNSPYIVGFYGA 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK-RVNVIKGVANALSYMHHDCFPPI 900
+ + E+++ GSL +L E K + VIKG L+Y+ I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTYLREK--HKI 126
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
+HRD+ +L++ + + DFG + L +N GT Y++PE + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQS 184
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRN---IVKFYGF 841
G G G V+K +KL L NQ + E+ + N IV FYG
Sbjct: 15 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNSPYIVGFYGA 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK-RVNVIKGVANALSYMHHDCFPPI 900
+ + E+++ GSL +L E K + VIKG L+Y+ I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTYLREK--HKI 126
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
+HRD+ +L++ + + DFG + L +N GT Y++PE + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQS 184
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 20/223 (8%)
Query: 759 SQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKK--LHSLPTGEI 816
S+ N+ +LL TF GK++L G Y ++ + K H+L +
Sbjct: 3 SRVTMNEFEYLKLLGKGTF-GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 61
Query: 817 GINQKGFVSEITEIRHRNIVKF-YGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDW 875
N RH + Y F +H + F V EY G L LS E +E D
Sbjct: 62 LQNS----------RHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE-DR 109
Query: 876 SKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935
++ + +AL Y+H + +++RD+ + ++LD + ++DFG K D +
Sbjct: 110 ARFYGA--EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 165
Query: 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT Y+APE+ D + GV++ E++ G+ P
Sbjct: 166 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+ H NIVK + + L+LV EY G + L E + + + + +A+
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAV 126
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG---YI 946
Y H I+HRD+ ++ +LLD + ++DFG + + + ++L CG Y
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPPYA 179
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + + + DV++ GV++ ++ G P
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCF 897
FY F ++L++V EY+ G L ++SN + W++ V AL +H F
Sbjct: 140 FYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALDAIHSMGF 194
Query: 898 PPILHRDISSKKVLLDLEYKAHVSDFGTA-KFLKPDSSNWSELAGTCGYIAPELAYTMRA 956
+HRD+ +LLD ++DFGT K K GT YI+PE+ +
Sbjct: 195 ---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 957 N----EKCDVFNFGVLVLEVIEGKHP 978
+ +CD ++ GV + E++ G P
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+ H NIVK + + L+LV EY G + L E + + + + +A+
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAV 126
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG---YI 946
Y H I+HRD+ ++ +LLD + ++DFG + + + ++L CG Y
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPPYA 179
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + + + DV++ GV++ ++ G P
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+ H NIVK + + L+LV EY G + L E + + + + +A+
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAV 126
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG---YI 946
Y H I+HRD+ ++ +LLD + ++DFG + + + ++L CG Y
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPPYA 179
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + + + DV++ GV++ ++ G P
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRN---IVKFYGF 841
G G G V+K +KL L NQ + E+ + N IV FYG
Sbjct: 15 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNSPYIVGFYGA 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK-RVNVIKGVANALSYMHHDCFPPI 900
+ + E+++ GSL +L E K + VIKG L+Y+ I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTYLREK--HKI 126
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
+HRD+ +L++ + + DFG + L +N GT Y++PE + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQS 184
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRN---IVKFYGF 841
G G G V+K +KL L NQ + E+ + N IV FYG
Sbjct: 15 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNSPYIVGFYGA 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK-RVNVIKGVANALSYMHHDCFPPI 900
+ + E+++ GSL +L E K + VIKG L+Y+ I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTYLREKH--KI 126
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
+HRD+ +L++ + + DFG + L +N GT Y++PE + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQS 184
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ G+ ++E+ G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 28/231 (12%)
Query: 764 NDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSG-DTRAVKKLHSLPTGEIGINQKG 822
N + E + FE VL GTG G V+ SG DT + + L I QK
Sbjct: 43 NLTGHAEKVGIENFELLKVL-GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATI--VQKA 99
Query: 823 FVSEITEIRHRNIVKF-----------YGFCSHTQHLFLVYEYLERGSLATILSNEATAA 871
+E T R +++ Y F + T+ L L+ +Y+ G L T LS
Sbjct: 100 KTTEHTRTE-RQVLEHIRQSPFLVTLHYAFQTETK-LHLILDYINGGELFTHLSQRERFT 157
Query: 872 ELDWSKRVNVIKG-VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK-FL 929
E V + G + AL ++H I++RDI + +LLD ++DFG +K F+
Sbjct: 158 E----HEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210
Query: 930 KPDSSNWSELAGTCGYIAPELAYTMRA--NEKCDVFNFGVLVLEVIEGKHP 978
++ + GT Y+AP++ + ++ D ++ GVL+ E++ G P
Sbjct: 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCF 897
FY F ++L++V EY+ G L ++SN + W++ V AL +H F
Sbjct: 135 FYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALDAIHSMGF 189
Query: 898 PPILHRDISSKKVLLDLEYKAHVSDFGTA-KFLKPDSSNWSELAGTCGYIAPELAYTMRA 956
+HRD+ +LLD ++DFGT K K GT YI+PE+ +
Sbjct: 190 ---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 246
Query: 957 N----EKCDVFNFGVLVLEVIEGKHP 978
+ +CD ++ GV + E++ G P
Sbjct: 247 DGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
++ + +I+H NIV T H +LV + + G L + E D S VI+
Sbjct: 57 IAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQ 113
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLL---DLEYKAHVSDFGTAKFLKPDSSNWSELA 940
V +A+ Y+H + I+HRD+ + +L + K ++DFG +K + S
Sbjct: 114 QVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTAC 168
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT GY+APE+ ++ D ++ GV+ ++ G P
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 20/218 (9%)
Query: 764 NDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKK--LHSLPTGEIGINQK 821
N+ +LL TF GK++L G Y ++ + K H+L + N
Sbjct: 9 NEFEYLKLLGKGTF-GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS- 66
Query: 822 GFVSEITEIRHRNIVKF-YGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN 880
RH + Y F +H + F V EY G L LS E +E D ++
Sbjct: 67 ---------RHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE-DRARFYG 115
Query: 881 VIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA 940
+ +AL Y+H + +++RD+ + ++LD + ++DFG K D +
Sbjct: 116 A--EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC 171
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT Y+APE+ D + GV++ E++ G+ P
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+ H NIVK + + L+LV EY G + L E + + + + +A+
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAV 127
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE 949
Y H I+HRD+ ++ +LLD + ++DFG + + G+ Y APE
Sbjct: 128 QYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGSPPYAAPE 183
Query: 950 LAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
L + + + DV++ GV++ ++ G P
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+ H NIVK + + L+L+ EY G + L E + + + + +A+
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK---FRQIVSAV 124
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE 949
Y H I+HRD+ ++ +LLD + ++DFG + G+ Y APE
Sbjct: 125 QYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDTFCGSPPYAAPE 180
Query: 950 LAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
L + + + DV++ GV++ ++ G P
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 49/290 (16%)
Query: 785 GTGGCGTVYKAELTS-GDTRAVKKL--HSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A G AV K+ L + ++ +SE+ + +H NIV
Sbjct: 55 GAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVN 114
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILS-----------NEATAAELDWSKR--VNVIKG 884
G C+H + ++ EY G L L N + E S R ++
Sbjct: 115 LLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQ 174
Query: 885 VANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT- 942
VA ++++ +C +HRD++++ VLL + A + DFG A+ + DS+ +
Sbjct: 175 VAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 943 -CGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPGHFXXXXXXXXXXXXNMNIV 998
++APE + + DV+++G+L+ E+ +PG I+
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG-----------------IL 273
Query: 999 VNDLIDSRLPPPLGEVEEKL--KSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
VN + + K++ ++ C P RPT Q++C+ L
Sbjct: 274 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 323
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+ H NIVK + + L+LV EY G + L E + + + + +A+
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAK---FRQIVSAV 119
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG---YI 946
Y H I+HRD+ ++ +LLD + ++DFG + + + ++L CG Y
Sbjct: 120 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPPYA 172
Query: 947 APELAYTMRAN-EKCDVFNFGVLVLEVIEGKHP 978
APEL + + + DV++ GV++ ++ G P
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCF 897
FY F ++L++V EY+ G L ++SN + W++ V AL +H F
Sbjct: 140 FYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALDAIHSMGF 194
Query: 898 PPILHRDISSKKVLLDLEYKAHVSDFGTA-KFLKPDSSNWSELAGTCGYIAPELAYTMRA 956
+HRD+ +LLD ++DFGT K K GT YI+PE+ +
Sbjct: 195 ---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 957 N----EKCDVFNFGVLVLEVIEGKHP 978
+ +CD ++ GV + E++ G P
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 785 GTGGCGTVYKAELTSGDTR--------AVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D AVK L S T + + +SE+ ++ H
Sbjct: 78 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---DLSDLISEMEMMKMIGKH 134
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAA-------------ELDWSKRV 879
+NI+ G C+ L+++ EY +G+L L +L V
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ VA + Y+ C +HRD++++ VL+ + ++DFG A+ +
Sbjct: 195 SCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 939 LAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE + + DV++FGVL+ E+
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 25/164 (15%)
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSY 891
HRN+++ F +LV+E + GS+ + + EL+ S V++ VA+AL +
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDF 126
Query: 892 MHHDCFPPILHRDISSKKVLLDLEYKAHVS-------DFGTAKFLKPDSSNWS--ELAGT 942
+H+ I HRD+ + +L E+ VS D G+ L D S S EL
Sbjct: 127 LHNK---GIAHRDLKPENIL--CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTP 181
Query: 943 CG---YIAPEL--AYTMRA---NEKCDVFNFGVLVLEVIEGKHP 978
CG Y+APE+ A++ A +++CD+++ GV++ ++ G P
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E++++ + ++ T L K +++G+A S+
Sbjct: 74 IHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 126
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 187 AVDIWSLGCIFAEMV 201
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 829 EIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANA 888
+++H NIV+ + +LV++ + G L + +E D S + I+ + +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILES 117
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWSELAGTCGY 945
++Y H + I+HR++ + +LL + K ++DFG A + DS W AGT GY
Sbjct: 118 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGY 173
Query: 946 IAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++PE+ ++ D++ GV++ ++ G P
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 829 EIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANA 888
+++H NIV+ + +LV++ + G L + +E D S + I+ + +
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILES 116
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWSELAGTCGY 945
++Y H + I+HR++ + +LL + K ++DFG A + DS W AGT GY
Sbjct: 117 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGY 172
Query: 946 IAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++PE+ ++ D++ GV++ ++ G P
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 829 EIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANA 888
+++H NIV+ + +LV++ + G L + +E D S + I+ + +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILES 117
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKA---HVSDFGTAKFLKPDSSNWSELAGTCGY 945
++Y H + I+HR++ + +LL + K ++DFG A + DS W AGT GY
Sbjct: 118 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGY 173
Query: 946 IAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++PE+ ++ D++ GV++ ++ G P
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+ K+ L T G+ +S + E+ H NIVK
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 123
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+ K+ L T G+ +S + E+ H NIVK
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + + ++ T L K +++G+A S+
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 122
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ ++ T Y APE+ + +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + ++ T L K +++G+A S+
Sbjct: 72 IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 124
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 185 AVDIWSLGCIFAEMV 199
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 764 NDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKK--LHSLPTGEIGINQK 821
N+ +LL TF GK++L G Y ++ + K H+L + N +
Sbjct: 148 NEFEYLKLLGKGTF-GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 822 G-FVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN 880
F++ + Y F +H + L V EY G L LS E +E R
Sbjct: 207 HPFLTALK----------YSFQTHDR-LCFVMEYANGGELFFHLSRERVFSE----DRAR 251
Query: 881 VIKG-VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
+ +AL Y+H + +++RD+ + ++LD + ++DFG K D +
Sbjct: 252 FYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 309
Query: 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT Y+APE+ D + GV++ E++ G+ P
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 764 NDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKK--LHSLPTGEIGINQK 821
N+ +LL TF GK++L G Y ++ + K H+L + N +
Sbjct: 151 NEFEYLKLLGKGTF-GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 822 G-FVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN 880
F++ + Y F +H + L V EY G L LS E +E R
Sbjct: 210 HPFLTALK----------YSFQTHDR-LCFVMEYANGGELFFHLSRERVFSE----DRAR 254
Query: 881 VIKG-VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
+ +AL Y+H + +++RD+ + ++LD + ++DFG K D +
Sbjct: 255 FYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 312
Query: 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT Y+APE+ D + GV++ E++ G+ P
Sbjct: 313 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 27/242 (11%)
Query: 752 RRRKRTDSQEGQNDVNNQELLSASTFEGKMVLH--------GTGGCGTVYKAE-LTSGDT 802
R R+ + E V E L +E + +H G G G V++ E +G
Sbjct: 61 RSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQ 120
Query: 803 RAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLAT 862
AVKK+ + + + + + IV YG + + E LE GSL
Sbjct: 121 CAVKKV------RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 174
Query: 863 ILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE-YKAHVS 921
++ + E + + + L Y+H ILH D+ + VLL + A +
Sbjct: 175 LVKEQGCLPE---DRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALC 228
Query: 922 DFGTAKFLKPDSSNWSELAG-----TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGK 976
DFG A L+PD S L G T ++APE+ + K DV++ ++L ++ G
Sbjct: 229 DFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGC 288
Query: 977 HP 978
HP
Sbjct: 289 HP 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + ++ T L K +++G+A S+
Sbjct: 74 IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 126
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 187 AVDIWSLGCIFAEMV 201
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
+V+ + ++L++V EY+ G L ++SN + W+K V AL +H
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK--WAKFYTA--EVVLALDAIHS 192
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS---NWSELAGTCGYIAPELA 951
++HRD+ +LLD ++DFGT +K D + + GT YI+PE+
Sbjct: 193 ---MGLIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAVGTPDYISPEVL 247
Query: 952 YTMRAN----EKCDVFNFGVLVLEVIEGKHP 978
+ + +CD ++ GV + E++ G P
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + ++ T L K +++G+A S+
Sbjct: 73 IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 125
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 186 AVDIWSLGCIFAEMV 200
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 888 ALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIA 947
AL Y+ + I+HRD+ +LLD H++DF A L P + + +AGT Y+A
Sbjct: 127 ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGTKPYMA 182
Query: 948 PELAYTMRA---NEKCDVFNFGVLVLEVIEGKHPGH 980
PE+ + + + D ++ GV E++ G+ P H
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 799 SGDTRAVKKL-HSLPTGEIGINQKGFVSEITEIR--HRN-IVKFYG--FCSHTQHLFLVY 852
+G AVK+L HS P Q+ F EI ++ H + IVK+ G + Q L LV
Sbjct: 51 TGALVAVKQLQHSGPD-----QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVM 105
Query: 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYM-HHDCFPPILHRDISSKKVL 911
EYL G L L A LD S+ + + + Y+ C +HRD++++ +L
Sbjct: 106 EYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNIL 159
Query: 912 LDLEYKAHVSDFGTAKFLKPDSSNW---SELAGTCGYIAPELAYTMRANEKCDVFNFGVL 968
++ E ++DFG AK L D + + APE + + DV++FGV+
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 219
Query: 969 VLEV 972
+ E+
Sbjct: 220 LYEL 223
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA +G+ A+KK+ L T G+ +S + E+ H NIVK
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR--VNVIKGVANALSYMHHDCFPP 899
L+LV+E+L + ++ T L K +++G+A S+
Sbjct: 74 IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR------- 126
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANE 958
+LHRD+ + +L++ E ++DFG A+ + T Y APE+ + +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 959 KCDVFNFGVLVLEVI 973
D+++ G + E++
Sbjct: 187 AVDIWSLGCIFAEMV 201
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 842 CSHTQ-HLFLVYEYLERGSLATILSNEATAAELD---WSKRVNVIKGVANALSYMHHDCF 897
C T+ LF V EY+ G L + + E +S +++ AL+Y+H
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------ALNYLHER-- 129
Query: 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAK-FLKPDSSNWSELAGTCGYIAPELAYTMRA 956
I++RD+ VLLD E ++D+G K L+P + S GT YIAPE+
Sbjct: 130 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAPEILRGEDY 187
Query: 957 NEKCDVFNFGVLVLEVIEGKHP 978
D + GVL+ E++ G+ P
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSP 209
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 14/150 (9%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + L LV E G L L + E+ S ++ V+ + Y+
Sbjct: 72 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEE 128
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG-----YIAPE 949
F +HRD++++ VLL + A +SDFG +K L D S ++ A + G + APE
Sbjct: 129 KNF---VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT--ARSAGKWPLKWYAPE 183
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + + DV+++GV + E + G+ P
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 842 CSHTQ-HLFLVYEYLERGSLATILSNEATAAELD---WSKRVNVIKGVANALSYMHHDCF 897
C T+ LF V EY+ G L + + E +S +++ AL+Y+H
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------ALNYLHERG- 173
Query: 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAKF-LKPDSSNWSELAGTCGYIAPELAYTMRA 956
I++RD+ VLLD E ++D+G K L+P + S GT YIAPE+
Sbjct: 174 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-STFCGTPNYIAPEILRGEDY 230
Query: 957 NEKCDVFNFGVLVLEVIEGKHP 978
D + GVL+ E++ G+ P
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSP 252
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 100
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ Y +G+L L N ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 842 CSHTQ-HLFLVYEYLERGSLATILSNEATAAELD---WSKRVNVIKGVANALSYMHHDCF 897
C T+ LF V EY+ G L + + E +S +++ AL+Y+H
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------ALNYLHER-- 125
Query: 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAK-FLKPDSSNWSELAGTCGYIAPELAYTMRA 956
I++RD+ VLLD E ++D+G K L+P + S GT YIAPE+
Sbjct: 126 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAPEILRGEDY 183
Query: 957 NEKCDVFNFGVLVLEVIEGKHP 978
D + GVL+ E++ G+ P
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSP 205
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 799 SGDTRAVKKL-HSLPTGEIGINQKGFVSEITEIR--HRN-IVKFYG--FCSHTQHLFLVY 852
+G AVK+L HS P Q+ F EI ++ H + IVK+ G + Q L LV
Sbjct: 39 TGALVAVKQLQHSGPD-----QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVM 93
Query: 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYM-HHDCFPPILHRDISSKKVL 911
EYL G L L A LD S+ + + + Y+ C +HRD++++ +L
Sbjct: 94 EYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNIL 147
Query: 912 LDLEYKAHVSDFGTAKFLKPDSSNW---SELAGTCGYIAPELAYTMRANEKCDVFNFGVL 968
++ E ++DFG AK L D + + APE + + DV++FGV+
Sbjct: 148 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 207
Query: 969 VLEV 972
+ E+
Sbjct: 208 LYEL 211
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 831 RHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALS 890
+H NI+ +H++LV E + G L + + +E + S V+ + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS---FVLHTIGKTVE 135
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYK----AHVSDFGTAKFLKPDSSNWSELAGTCGYI 946
Y+H ++HRD+ +L E + DFG AK L+ ++ T ++
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 947 APELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
APE+ +E CD+++ G+L+ ++ G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 799 SGDTRAVKKL-HSLPTGEIGINQKGFVSEITEIR--HRN-IVKFYG--FCSHTQHLFLVY 852
+G AVK+L HS P Q+ F EI ++ H + IVK+ G + Q L LV
Sbjct: 38 TGALVAVKQLQHSGPD-----QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVM 92
Query: 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYM-HHDCFPPILHRDISSKKVL 911
EYL G L L A LD S+ + + + Y+ C +HRD++++ +L
Sbjct: 93 EYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNIL 146
Query: 912 LDLEYKAHVSDFGTAKFLKPDSSNW---SELAGTCGYIAPELAYTMRANEKCDVFNFGVL 968
++ E ++DFG AK L D + + APE + + DV++FGV+
Sbjct: 147 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 206
Query: 969 VLEV 972
+ E+
Sbjct: 207 LYEL 210
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 848 LFLVYEYLERGSLATILSN--EATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDI 905
L+LV +Y G L T+LS + E+ ++ + +++ +H+ +HRDI
Sbjct: 149 LYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI-DSVHQLHY------VHRDI 201
Query: 906 SSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA-GTCGYIAPELAYTM-----RANEK 959
+L+D+ ++DFG+ L D + S +A GT YI+PE+ M R +
Sbjct: 202 KPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPE 261
Query: 960 CDVFNFGVLVLEVIEGKHP 978
CD ++ GV + E++ G+ P
Sbjct: 262 CDWWSLGVCMYEMLYGETP 280
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 842 CSHTQ-HLFLVYEYLERGSLATILSNEATAAELD---WSKRVNVIKGVANALSYMHHDCF 897
C T+ LF V EY+ G L + + E +S +++ AL+Y+H
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------ALNYLHERG- 141
Query: 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAKF-LKPDSSNWSELAGTCGYIAPELAYTMRA 956
I++RD+ VLLD E ++D+G K L+P + S GT YIAPE+
Sbjct: 142 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAPEILRGEDY 198
Query: 957 NEKCDVFNFGVLVLEVIEGKHP 978
D + GVL+ E++ G+ P
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSP 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIG-----INQKGFVSEITEIRHRNIVKF 838
G G GTVYKA + SG A+K + +P GE G + + + + H N+V+
Sbjct: 13 GVGAYGTVYKARDPHSGHFVALKSVR-VPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 839 YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
C+ ++ + LV+E++++ L T L ++A L ++++ L ++H
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT 953
+C I+HRD+ + +L+ ++DFG A+ + + + T Y APE+
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LAPVVVTLWYRAPEVLLQ 185
Query: 954 MRANEKCDVFNFGVLVLEVIEGK 976
D+++ G + E+ K
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRK 208
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 25/164 (15%)
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSY 891
HRN+++ F +LV+E + GS+ + + EL+ S V++ VA+AL +
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDF 126
Query: 892 MHHDCFPPILHRDISSKKVLLDLEYKAHVS-----DFGTAKFLK--PDSSNWS--ELAGT 942
+H+ I HRD+ + +L E+ VS DFG +K D S S EL
Sbjct: 127 LHNK---GIAHRDLKPENIL--CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTP 181
Query: 943 CG---YIAPEL--AYTMRA---NEKCDVFNFGVLVLEVIEGKHP 978
CG Y+APE+ A++ A +++CD+++ GV++ ++ G P
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 43/220 (19%)
Query: 785 GTGGCGTVYKAELTSGD--------TRAVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D T AVK L T + + VSE+ ++ H
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDLVSEMEMMKMIGKH 100
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-------------NEATAAELDWSKRV 879
+NI+ G C+ L+++ Y +G+L L N ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 880 NVIKGVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+ +A + Y+ C +HRD++++ VL+ ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 939 LAGTCG------YIAPELAYTMRANEKCDVFNFGVLVLEV 972
T ++APE + + DV++FGVL+ E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 18/183 (9%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR---HRNIVKFYGFC--SHTQHLFLVYE 853
+G+ AVK L + + ++ G+ EI +R H +I+K+ G C + L LV E
Sbjct: 59 TGEMVAVKALKADAGPQ---HRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
Y+ GSL L + + ++ + + + ++Y+H + +HRD++++ VLLD
Sbjct: 116 YVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLLD 168
Query: 914 LEYKAHVSDFGTAKFLKPDSSNW---SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVL 970
+ + DFG AK + + + + APE + DV++FGV +
Sbjct: 169 NDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228
Query: 971 EVI 973
E++
Sbjct: 229 ELL 231
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIG-----INQKGFVSEITEIRHRNIVKF 838
G G GTVYKA + SG A+K + +P GE G + + + + H N+V+
Sbjct: 13 GVGAYGTVYKARDPHSGHFVALKSVR-VPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 839 YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
C+ ++ + LV+E++++ L T L ++A L ++++ L ++H
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT 953
+C I+HRD+ + +L+ ++DFG A+ + + + T Y APE+
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-TLWYRAPEVLLQ 185
Query: 954 MRANEKCDVFNFGVLVLEVIEGK 976
D+++ G + E+ K
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRK 208
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 831 RHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALS 890
+H NI+ +H++LV E + G L + + +E + S V+ + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS---FVLHTIGKTVE 135
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYK----AHVSDFGTAKFLKPDSSNWSELAGTCGYI 946
Y+H ++HRD+ +L E + DFG AK L+ ++ T ++
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 947 APELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
APE+ +E CD+++ G+L+ ++ G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIG-----INQKGFVSEITEIRHRNIVKF 838
G G GTVYKA + SG A+K + +P GE G + + + + H N+V+
Sbjct: 13 GVGAYGTVYKARDPHSGHFVALKSVR-VPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 839 YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
C+ ++ + LV+E++++ L T L ++A L ++++ L ++H
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT 953
+C I+HRD+ + +L+ ++DFG A+ + + T Y APE+
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPVVVTLWYRAPEVLLQ 185
Query: 954 MRANEKCDVFNFGVLVLEVIEGK 976
D+++ G + E+ K
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRK 208
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 785 GTGGCGTVYK-AELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
G G G V++ E +S T K + T ++ + ++ +S + RHRNI+ +
Sbjct: 14 GRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKE--ISILNIARHRNILHLHESFE 71
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH-HDCFPPILH 902
+ L +++E++ L +A EL+ + V+ + V AL ++H H+ I H
Sbjct: 72 SMEELVMIFEFIS--GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN----IGH 125
Query: 903 RDISSKKVLLDLEYKAHVS--DFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
DI + ++ + + +FG A+ LKP N+ L Y APE+ +
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKP-GDNFRLLFTAPEYYAPEVHQHDVVSTAT 184
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ G LV ++ G +P
Sbjct: 185 DMWSLGTLVYVLLSGINP 202
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 18/202 (8%)
Query: 785 GTGGCGTV----YKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSE----ITEIRHRNIV 836
G G G V +KAE + ++K L E +K +SE + ++H +V
Sbjct: 47 GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKE----EKHIMSERNVLLKNVKHPFLV 102
Query: 837 KFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC 896
+ L+ V +Y+ G L L E E + +A+AL Y+H
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE---PRARFYAAEIASALGYLHSLN 159
Query: 897 FPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRA 956
I++RD+ + +LLD + ++DFG K +S S GT Y+APE+ +
Sbjct: 160 ---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 957 NEKCDVFNFGVLVLEVIEGKHP 978
+ D + G ++ E++ G P
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPP 238
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRN---IVKFYGF 841
G G G V K + +KL L NQ + E+ + N IV FYG
Sbjct: 25 GAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ--IIRELQVLHECNSPYIVGFYGA 82
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK-RVNVIKGVANALSYMHHDCFPPI 900
+ + E+++ GSL +L E K + V++G+A L H I
Sbjct: 83 FYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA-YLREKHQ-----I 136
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
+HRD+ +L++ + + DFG + L +N GT Y+APE + +
Sbjct: 137 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPERLQGTHYSVQS 194
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ G+ ++E+ G++P
Sbjct: 195 DIWSMGLSLVELAVGRYP 212
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLP-TGEIGINQKGFVSEITEIRHRNIVKFYGFC 842
G G V++ +GD A+K +++ + + + F + ++ H+NIVK +
Sbjct: 18 GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF-EVLKKLNHKNIVKLFAIE 76
Query: 843 SHT--QHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
T +H L+ E+ GSL T+L + A L S+ + V++ V ++++ + I
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---I 133
Query: 901 LHRDISSKKVLL----DLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPEL---AYT 953
+HR+I ++ D + ++DFG A+ L+ D + L GT Y+ P++ A
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHPDMYERAVL 192
Query: 954 MRANEK-----CDVFNFGVLVLEVIEGKHP 978
+ ++K D+++ GV G P
Sbjct: 193 RKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLP-TGEIGINQKGFVSEITEIRHRNIVKFYGFC 842
G G V++ +GD A+K +++ + + + F + ++ H+NIVK +
Sbjct: 18 GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF-EVLKKLNHKNIVKLFAIE 76
Query: 843 SHT--QHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
T +H L+ E+ GSL T+L + A L S+ + V++ V ++++ + I
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---I 133
Query: 901 LHRDISSKKVLL----DLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPEL---AYT 953
+HR+I ++ D + ++DFG A+ L+ D + L GT Y+ P++ A
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDMYERAVL 192
Query: 954 MRANEK-----CDVFNFGVLVLEVIEGKHP 978
+ ++K D+++ GV G P
Sbjct: 193 RKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 22/185 (11%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQK-GFVSEITEIR---HRNIVKFYGFCSHT--QHLFLVY 852
+G+ AVK L + + G + G+ EI +R H +I+K+ G C + L LV
Sbjct: 42 TGEMVAVKALKA----DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVM 97
Query: 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL 912
EY+ GSL L + + ++ + + + ++Y+H + +HR+++++ VLL
Sbjct: 98 EYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHSQHY---IHRNLAARNVLL 150
Query: 913 DLEYKAHVSDFGTAKFLKPDSSNWSELA----GTCGYIAPELAYTMRANEKCDVFNFGVL 968
D + + DFG AK + P+ + + + APE + DV++FGV
Sbjct: 151 DNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 969 VLEVI 973
+ E++
Sbjct: 210 LYELL 214
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 33/215 (15%)
Query: 785 GTGGCGTVYKAELTSGDTR--------AVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D AVK L S T + + +SE+ ++ H
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---DLSDLISEMEMMKMIGKH 93
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-----------NEATAAELDWSKR--V 879
+NI+ G C+ L+++ EY +G+L L N + E S + V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
+ VA + Y+ +HRD++++ VL+ + ++DFG A+ +
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 940 AG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
G ++APE + + DV++FGVL+ E+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQ-KGFVSEITEIRHRNIVKFYGF-- 841
G GG G V++A+ D K LP E+ + V + ++ H IV+++
Sbjct: 14 GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWL 73
Query: 842 ----------CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSY 891
S +L++ + + +L ++ T E + S +++ +A A+ +
Sbjct: 74 EKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEF 133
Query: 892 MHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA----------- 940
+H ++HRD+ + ++ V DFG + D + L
Sbjct: 134 LHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ 190
Query: 941 -GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
GT Y++PE + + K D+F+ G+++ E++
Sbjct: 191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 155 LGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGL 214
+ L+S ++ L + + V P L GL NL +YL+ N+I P + L +L YL +
Sbjct: 109 IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 164
Query: 215 NKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSS 274
NQ++ P NLS L L DN++S P L S +L+ ++L NQ++ P
Sbjct: 165 GNNQVNDLTP--LANLSKLTTLRADDNKISDISP--LASLPNLIEVHLKDNQISDVSP-- 218
Query: 275 FGNLSSL 281
NLS+L
Sbjct: 219 LANLSNL 225
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLI 88
LDL+ Q+ P ++ LS L+ L NQ + I P + LTNL L + NQ+N L
Sbjct: 118 LDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDLT 173
Query: 89 PEELGELTSLNELALSYNRLNGSIP 113
P L L+ L L N+++ P
Sbjct: 174 P--LANLSKLTTLRADDNKISDISP 196
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
IV YG + + E LE GSL ++ E + + + L Y+H
Sbjct: 125 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLH 181
Query: 894 HDCFPPILHRDISSKKVLLDLE-YKAHVSDFGTAKFLKPDSSNWSELAG-----TCGYIA 947
ILH D+ + VLL + +A + DFG A L+PD S L G T ++A
Sbjct: 182 TR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMA 238
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
PE+ + K D+++ ++L ++ G HP
Sbjct: 239 PEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 22/185 (11%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQK-GFVSEITEIR---HRNIVKFYGFCSHT--QHLFLVY 852
+G+ AVK L + + G + G+ EI +R H +I+K+ G C + L LV
Sbjct: 42 TGEMVAVKALKA----DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVM 97
Query: 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL 912
EY+ GSL L + + ++ + + + ++Y+H + +HR+++++ VLL
Sbjct: 98 EYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHY---IHRNLAARNVLL 150
Query: 913 DLEYKAHVSDFGTAKFLKPDSSNWSELA----GTCGYIAPELAYTMRANEKCDVFNFGVL 968
D + + DFG AK + P+ + + + APE + DV++FGV
Sbjct: 151 DNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 969 VLEVI 973
+ E++
Sbjct: 210 LYELL 214
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 28/208 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFY----- 839
G G G V+ + G+ AVK + T E ++ + + +RH NI+ F
Sbjct: 46 GKGRYGEVWMGKW-RGEKVAVKVFFT--TEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 840 GFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCF-- 897
G S TQ L+L+ +Y E GSL L + LD + + + L ++H + F
Sbjct: 103 GTGSWTQ-LYLITDYHENGSLYDYLK----STTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 898 ---PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW----SELAGTCGYIAPE- 949
P I HRD+ SK +L+ ++D G A D++ + GT Y+ PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEV 217
Query: 950 LAYTMRANE-----KCDVFNFGVLVLEV 972
L ++ N D+++FG+++ EV
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 27/242 (11%)
Query: 752 RRRKRTDSQEGQNDVNNQELLSASTFEGKMVLH--------GTGGCGTVYKAE-LTSGDT 802
R R+ + E V E L +E + +H G G G V++ E +G
Sbjct: 42 RSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQ 101
Query: 803 RAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLAT 862
AVKK+ + + + + + IV YG + + E LE GSL
Sbjct: 102 CAVKKVR------LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 155
Query: 863 ILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE-YKAHVS 921
++ + E + + + L Y+H ILH D+ + VLL + A +
Sbjct: 156 LVKEQGCLPE---DRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALC 209
Query: 922 DFGTAKFLKPDSSNWSELAG-----TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGK 976
DFG A L+PD L G T ++APE+ + K DV++ ++L ++ G
Sbjct: 210 DFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGC 269
Query: 977 HP 978
HP
Sbjct: 270 HP 271
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 33/215 (15%)
Query: 785 GTGGCGTVYKAELTSGDTR--------AVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D AVK L S T + + +SE+ ++ H
Sbjct: 22 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---DLSDLISEMEMMKMIGKH 78
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-----------NEATAAELDWSKR--V 879
+NI+ G C+ L+++ EY +G+L L N + E S + V
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
+ VA + Y+ +HRD++++ VL+ + ++DFG A+ +
Sbjct: 139 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 940 AG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
G ++APE + + DV++FGVL+ E+
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 7/137 (5%)
Query: 178 SLGGLKNLTFVYLNNNRIVGSIPSEI-GNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFL 236
+L L NLT++ L N++ S+P+ + L +L L L +NQL L+NL +L
Sbjct: 80 ALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 237 YLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSS-FGNLSSLKHLHVHNINKLSGS 295
YL+ N+L +L L L +NQL SLP F L+ LK L + N N+L S
Sbjct: 139 YLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSL-NDNQLK-S 195
Query: 296 IPKEI-GNLKSLSHLWL 311
+P + L SL+H+WL
Sbjct: 196 VPDGVFDRLTSLTHIWL 212
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 182 LKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDN 241
L N+ ++ L N++ S + L +L+YL L NQL L+NLK L L +N
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 242 RLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEI- 300
+L +L YLYL HNQL F L++L L + N N+L S+P+ +
Sbjct: 120 QLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDN-NQLQ-SLPEGVF 177
Query: 301 GNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIREN 338
L L L L+ QL L+++ +++ N
Sbjct: 178 DKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNN 215
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 286 VHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIP 345
+H+I+ L KE+ NL ++L L+ QL L+N++ L + EN L S+P
Sbjct: 75 LHDISAL-----KELTNL---TYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL-QSLP 125
Query: 346 EEL-GRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEI-ENMKKLN 403
+ + +L +L+ L L N+L L+NL L N+L S+P+ + + + +L
Sbjct: 126 DGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLK 184
Query: 404 KYLLFENQFTGYLPQNVCQS-GSLTHFSVRNN 434
+ L +NQ +P V SLTH + NN
Sbjct: 185 QLSLNDNQLKS-VPDGVFDRLTSLTHIWLLNN 215
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Query: 327 LSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPH-CLGNLSNLKFFALRE 385
L N+R L + N L+ L L +L+ L L+ N+L S+P+ L+NLK L E
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVE 118
Query: 386 NELSGSIPQEI-ENMKKLNKYLLFENQFTGYLPQNVCQS-GSLTHFSVRNNNFVGPIPRS 443
N+L S+P + + + L L+ NQ LP+ V +LT + NN
Sbjct: 119 NQLQ-SLPDGVFDKLTNLTYLYLYHNQLQS-LPKGVFDKLTNLTRLDLDNNQLQSLPEGV 176
Query: 444 LQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEIS-----SNWI 493
T L L L NQL VF L + L NN + S S WI
Sbjct: 177 FDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNNPWDCACSDILYLSRWI 231
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 30/168 (17%)
Query: 230 LSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSS-FGNLSSLKHLHVHN 288
L N+++L L N+L L +L YL L+ NQL SLP+ F L++LK L
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELV--- 115
Query: 289 INKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEEL 348
L + QL L+N+ LY+ N L
Sbjct: 116 ----------------------LVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVF 153
Query: 349 GRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEI 396
+L +L++L L N+L L+ LK +L +N+L S+P +
Sbjct: 154 DKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLK-SVPDGV 200
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 588 LGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICN-LESLEYMN 646
L EL L +L L+ NQ + KL L +L L N L +P + + L +L Y+
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLY 139
Query: 647 LLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682
L N+L F ++ L+ +D+ N+LQ S+P
Sbjct: 140 LYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPE 174
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNG 86
YL L+ NQL L+ LK L NQ + LTNL L L NQL
Sbjct: 88 TYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQS 147
Query: 87 LIPEELGELTSLNELALSYNRLNGSIP 113
L +LT+L L L N+L S+P
Sbjct: 148 LPKGVFDKLTNLTRLDLDNNQLQ-SLP 173
Score = 30.0 bits (66), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 67/173 (38%), Gaps = 28/173 (16%)
Query: 351 LKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEI-ENMKKLNKYLLFE 409
L ++ L+L NKL+ L L+NL + L N+L S+P + + + L + +L E
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVE 118
Query: 410 NQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFG 469
NQ LP V L N T LY L NQL VF
Sbjct: 119 NQLQS-LPDGVFDK--------------------LTNLTYLY---LYHNQLQSLPKGVFD 154
Query: 470 IYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQL 522
+L LDL NN + K QL L++ N++ +T L
Sbjct: 155 KLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSL 207
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 33/215 (15%)
Query: 785 GTGGCGTVYKAELTSGDTR--------AVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D AVK L S T + + +SE+ ++ H
Sbjct: 29 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---DLSDLISEMEMMKMIGKH 85
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-----------NEATAAELDWSKR--V 879
+NI+ G C+ L+++ EY +G+L L N + E S + V
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
+ VA + Y+ +HRD++++ VL+ + ++DFG A+ +
Sbjct: 146 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 940 AG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
G ++APE + + DV++FGVL+ E+
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 33/215 (15%)
Query: 785 GTGGCGTVYKAELTSGDTR--------AVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D AVK L S T + + +SE+ ++ H
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---DLSDLISEMEMMKMIGKH 93
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-----------NEATAAELDWSKR--V 879
+NI+ G C+ L+++ EY +G+L L N + E S + V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
+ VA + Y+ +HRD++++ VL+ + ++DFG A+ +
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 940 AG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
G ++APE + + DV++FGVL+ E+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 33/215 (15%)
Query: 785 GTGGCGTVYKAELTSGDTR--------AVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D AVK L S T + + +SE+ ++ H
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---DLSDLISEMEMMKMIGKH 93
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-----------NEATAAELDWSKR--V 879
+NI+ G C+ L+++ EY +G+L L N + E S + V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
+ VA + Y+ +HRD++++ VL+ + ++DFG A+ +
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 940 AG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
G ++APE + + DV++FGVL+ E+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 33/215 (15%)
Query: 785 GTGGCGTVYKAELTSGDTR--------AVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D AVK L S T + + +SE+ ++ H
Sbjct: 30 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---DLSDLISEMEMMKMIGKH 86
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-----------NEATAAELDWSKR--V 879
+NI+ G C+ L+++ EY +G+L L N + E S + V
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
+ VA + Y+ +HRD++++ VL+ + ++DFG A+ +
Sbjct: 147 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 940 AG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
G ++APE + + DV++FGVL+ E+
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 33/215 (15%)
Query: 785 GTGGCGTVYKAELTSGDTR--------AVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D AVK L S T + + +SE+ ++ H
Sbjct: 26 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---DLSDLISEMEMMKMIGKH 82
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-----------NEATAAELDWSKR--V 879
+NI+ G C+ L+++ EY +G+L L N + E S + V
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
+ VA + Y+ +HRD++++ VL+ + ++DFG A+ +
Sbjct: 143 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 940 AG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
G ++APE + + DV++FGVL+ E+
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 33/215 (15%)
Query: 785 GTGGCGTVYKAELTSGDTR--------AVKKLHSLPTGEIGINQKGFVSEITEIR----H 832
G G G V AE D AVK L S T + + +SE+ ++ H
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---DLSDLISEMEMMKMIGKH 93
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILS-----------NEATAAELDWSKR--V 879
+NI+ G C+ L+++ EY +G+L L N + E S + V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
+ VA + Y+ +HRD++++ VL+ + ++DFG A+ +
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 940 AG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEV 972
G ++APE + + DV++FGVL+ E+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 125/288 (43%), Gaps = 28/288 (9%)
Query: 272 PSSFGNLSSLKHLHVHNINKLSGSIPKE--IGNLKSLSHLWLSKTQL-SGFIPPSLGNLS 328
P +F L L L ++ LS ++ K+ NLK+L+ L LSK Q+ S ++ PS G L+
Sbjct: 90 PDAFQGLFHLFELRLY-FCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLN 148
Query: 329 NIRGLYIRENMLYGSIPEELGRL--KSLSQLSLSVNKLNGSIP----HCLGNLSNLKFFA 382
+++ + N ++ EL L K+LS SL+ N L + C+ N+
Sbjct: 149 SLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEI 208
Query: 383 LREN------ELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQS-----GSLTHFSV 431
L + +++G+ I + + L G+ N+ L SV
Sbjct: 209 LDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSV 268
Query: 432 RN----NNFVGPI-PRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFG 486
R+ + FV + R + L L L N++ E F +L++L+LS N G
Sbjct: 269 RHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLS-YNLLG 327
Query: 487 EI-SSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLV 533
E+ SSN+ P++A +++ N I+ + +L LD N L
Sbjct: 328 ELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT 375
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 137/325 (42%), Gaps = 42/325 (12%)
Query: 164 VSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSI 223
++L N + + + GL NL + L+ N + S L ++Y+ L KN ++
Sbjct: 295 LNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQ 354
Query: 224 PPTAGNLSNLKFLYLHDNRLSG--YIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSS- 280
T L L+ L L DN L+ +IP S+ ++LS N+L +LP NL++
Sbjct: 355 DQTFKFLEKLQTLDLRDNALTTIHFIP-------SIPDIFLSGNKL-VTLPKI--NLTAN 404
Query: 281 LKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQL---SGFIPPSLGNLSNIRGLYIRE 337
L HL + + L I + + L L L++ + SG PS ++ L++ E
Sbjct: 405 LIHLSENRLENL--DILYFLLRVPHLQILILNQNRFSSCSGDQTPSEN--PSLEQLFLGE 460
Query: 338 NMLYGSIPEELGR-----LKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELS--- 389
NML + EL L L L L+ N LN P +L+ L+ +L N L+
Sbjct: 461 NMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLS 520
Query: 390 -GSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCT 448
+P +E + + NQ P SL+ + +N F+ S T
Sbjct: 521 HNDLPANLEILD------ISRNQLLAPNPDVFV---SLSVLDITHNKFICECELS----T 567
Query: 449 SLYSLRLERNQLTGNISEVFGIYPD 473
+ L + G ++++ +YPD
Sbjct: 568 FINWLNHTNVTIAGPPADIYCVYPD 592
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 591 LRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQN 650
L+ L LNL+ N+ ++ L L L+LS+N LG S L + Y++L +N
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 651 KLSGPIPSCFRRMHGLSSIDVSYNEL 676
++ F+ + L ++D+ N L
Sbjct: 349 HIAIIQDQTFKFLEKLQTLDLRDNAL 374
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH 893
IV YG + + E LE GSL ++ E + + + L Y+H
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLH 183
Query: 894 HDCFPPILHRDISSKKVLLDLE-YKAHVSDFGTAKFLKPDSSNWSELAG-----TCGYIA 947
ILH D+ + VLL + +A + DFG A L+PD S L G T ++A
Sbjct: 184 TR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMA 240
Query: 948 PELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
PE+ + K D+++ ++L ++ G HP
Sbjct: 241 PEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG 944
+ + L ++H I++RD+ + VLLD + +SD G A LK + AGT G
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++APEL + D F GV + E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG 944
+ + L ++H I++RD+ + VLLD + +SD G A LK + AGT G
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++APEL + D F GV + E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 33/208 (15%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEI----RHRNIVK--- 837
G G G V++A+L D A+KK+ + K F + +I +H N+V
Sbjct: 49 GNGSFGVVFQAKLVESDEVAIKKV---------LQDKRFKNRELQIMRIVKHPNVVDLKA 99
Query: 838 -FYGFCSHTQHLF--LVYEYLERGSLATILSNEATAAELDWSKRVNVIK----GVANALS 890
FY +F LV EY+ T+ A+L + + +IK + +L+
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPE----TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLKPDSSNWSELAGTCGYIAPE 949
Y+H I HRDI + +LLD + DFG+AK L N S + Y APE
Sbjct: 156 YIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YRAPE 211
Query: 950 LAY-TMRANEKCDVFNFGVLVLEVIEGK 976
L + D+++ G ++ E+++G+
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG 944
+ + L ++H I++RD+ + VLLD + +SD G A LK + AGT G
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++APEL + D F GV + E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV YG + + E LE GSL ++ E + + + L Y+H
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHT 168
Query: 895 DCFPPILHRDISSKKVLLDLE-YKAHVSDFGTAKFLKPDSSNWSELAG-----TCGYIAP 948
ILH D+ + VLL + +A + DFG A L+PD S L G T ++AP
Sbjct: 169 R---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 225
Query: 949 ELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
E+ + K D+++ ++L ++ G HP
Sbjct: 226 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG 944
+ + L ++H I++RD+ + VLLD + +SD G A LK + AGT G
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++APEL + D F GV + E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 33/211 (15%)
Query: 783 LHGTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFY 839
L G+GG G V+KA+ G T +K++ N+K V + ++ H NIV +
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKY-------NNEKAEREVKALAKLDHVNIVHYN 70
Query: 840 GFC-----------------SHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVI 882
G C S T+ LF+ E+ ++G+L + +LD + +
Sbjct: 71 G-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELF 128
Query: 883 KGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT 942
+ + + Y+H +++RD+ + L + + DFG LK D GT
Sbjct: 129 EQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR-XRSKGT 184
Query: 943 CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
Y++PE + ++ D++ G+++ E++
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W LAGT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 829 EIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANA 888
+++H NIV+ + +LV++ + G L + +E D S + I+ + +
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILES 140
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYK---AHVSDFGTAKFLKPDSSNWSELAGTCGY 945
++Y H + I+HR++ + +LL + K ++DFG A + DS W AGT GY
Sbjct: 141 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGY 196
Query: 946 IAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++PE+ ++ D++ GV++ ++ G P
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 7/138 (5%)
Query: 842 CSHT-QHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
C T L+ V EY+ G L + E V +A L ++ I
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAIGLFFLQSKG---I 142
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKC 960
++RD+ V+LD E ++DFG K D GT YIAPE+ +
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV 202
Query: 961 DVFNFGVLVLEVIEGKHP 978
D + FGVL+ E++ G+ P
Sbjct: 203 DWWAFGVLLYEMLAGQAP 220
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 34/196 (17%)
Query: 804 AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATI 863
AVK L + ++ + + + + E + NIVK G C+ + + L++EY+ G L
Sbjct: 81 AVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEF 140
Query: 864 L-------------SNEATAAE--------LDWSKRVNVIKGVANALSYMHHDCFPPILH 902
L S+ +T A L ++++ + + VA ++Y+ F +H
Sbjct: 141 LRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF---VH 197
Query: 903 RDISSKKVLLDLEYKAHVSDFG------TAKFLKPDSSNWSELAGTCGYIAPELAYTMRA 956
RD++++ L+ ++DFG +A + K D ++ A ++ PE + R
Sbjct: 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGND----AIPIRWMPPESIFYNRY 253
Query: 957 NEKCDVFNFGVLVLEV 972
+ DV+ +GV++ E+
Sbjct: 254 TTESDVWAYGVVLWEI 269
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K + W+ L GT Y+APE+ + N+
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLAPEIILSKGYNKA 239
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAA-------------EL 873
+ ++ H +++K YG CS L L+ EY + GSL L L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 874 DWSKRVNVIKGVANALSY-----MHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKF 928
D + G + ++ M + ++HRD++++ +L+ K +SDFG ++
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 929 LKPDSSNWSELAG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + S G ++A E + + DV++FGVL+ E++ G +P
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 824 VSEITEIRHRNIVKFYGFCS--HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNV 881
++ + ++ H N+VK + HL++V+E + +G + + + + + + ++
Sbjct: 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDL 146
Query: 882 IKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG 941
IKG+ Y+H + I+HRDI +L+ + ++DFG + K + S G
Sbjct: 147 IKGI----EYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVG 199
Query: 942 TCGYIAPE-LAYTMR--ANEKCDVFNFGVLVLEVIEGKHP 978
T ++APE L+ T + + + DV+ GV + + G+ P
Sbjct: 200 TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
I++RD+ V+LD E ++DFG K D GT YIAPE+ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + FGVL+ E++ G+ P
Sbjct: 523 VDWWAFGVLLYEMLAGQAP 541
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAA-------------EL 873
+ ++ H +++K YG CS L L+ EY + GSL L L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 874 DWSKRVNVIKGVANALSY-----MHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKF 928
D + G + ++ M + ++HRD++++ +L+ K +SDFG ++
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 929 LKPDSSNWSELAG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + S G ++A E + + DV++FGVL+ E++ G +P
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 40/223 (17%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G GTV G AVK++ + +I + + ++E + H N++++Y CS
Sbjct: 42 GYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIALMEIKLLTESDD--HPNVIRYY--CSE 96
Query: 845 TQHLFLVYEYLERGSL---ATILSNEATAAELDWSKRVN---VIKGVANALSYMHHDCFP 898
T FL Y LE +L + S + L K N +++ +A+ ++++H
Sbjct: 97 TTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---L 152
Query: 899 PILHRDISSKKVLL--------DLEYKAH-----VSDFGTAKFLKPDS------SNWSEL 939
I+HRD+ + +L+ D + A +SDFG K K DS N +
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNLNNP 210
Query: 940 AGTCGYIAPEL---AYTMRANEKCDVFNFGVLVLEVI-EGKHP 978
+GT G+ APEL + R D+F+ G + ++ +GKHP
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 785 GTGGCGTVYK-AELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
GTG G V++ E +G+ A K + + P + + ++ +RH +V +
Sbjct: 166 GTGAFGVVHRVTERATGNNFAAKFVMT-PHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
+ ++YE++ G L +++E D + V ++ V L +MH + + +H
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHENNY---VHL 279
Query: 904 DISSKKVLLDLEYKAHVS--DFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
D+ + ++ + + DFG L P S GT + APE+A D
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAPEVAEGKPVGYYTD 338
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL ++ G P
Sbjct: 339 MWSVGVLSYILLSGLSP 355
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 40/223 (17%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G GTV G AVK++ + +I + + ++E + H N++++Y CS
Sbjct: 42 GYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIALMEIKLLTESDD--HPNVIRYY--CSE 96
Query: 845 TQHLFLVYEYLERGSL---ATILSNEATAAELDWSKRVN---VIKGVANALSYMHHDCFP 898
T FL Y LE +L + S + L K N +++ +A+ ++++H
Sbjct: 97 TTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---L 152
Query: 899 PILHRDISSKKVLL--------DLEYKAH-----VSDFGTAKFLKPDS------SNWSEL 939
I+HRD+ + +L+ D + A +SDFG K K DS N +
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNLNNP 210
Query: 940 AGTCGYIAPEL---AYTMRANEKCDVFNFGVLVLEVI-EGKHP 978
+GT G+ APEL + R D+F+ G + ++ +GKHP
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSN--EATAAELDWSKRVNVIKGVANAL 889
R I + + +L+LV EY G L T+LS E AE+ R + + + A+
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEM---ARFYLAE-IVMAI 175
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA-GTCGYIAP 948
+H + +HRDI +LLD ++DFG+ L+ D + S +A GT Y++P
Sbjct: 176 DSVHRLGY---VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSP 232
Query: 949 ELAYTMRANE-------KCDVFNFGVLVLEVIEGKHP 978
E+ + +CD + GV E+ G+ P
Sbjct: 233 EILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 820 QKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
++ F+ E +R H +IVK G + ++++ E G L + L + LD +
Sbjct: 83 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLA 139
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ ++ AL+Y+ F +HRDI+++ VL+ + DFG +++++ DS+ +
Sbjct: 140 SLILYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 195
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE R DV+ FGV + E++
Sbjct: 196 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 785 GTGGCGTVYK-AELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
GTG G V++ E +G+ A K + + + +K + ++ +RH +V +
Sbjct: 60 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKE-IQTMSVLRHPTLVNLHDAFE 118
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
+ ++YE++ G L +++E D + V ++ V L +MH + + +H
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHENNY---VHL 173
Query: 904 DISSKKVLLDLEYKAHVS--DFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCD 961
D+ + ++ + + DFG L P S GT + APE+A D
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAPEVAEGKPVGYYTD 232
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GVL ++ G P
Sbjct: 233 MWSVGVLSYILLSGLSP 249
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAA-------------EL 873
+ ++ H +++K YG CS L L+ EY + GSL L L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 874 DWSKRVNVIKGVANALSY-----MHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKF 928
D + G + ++ M + ++HRD++++ +L+ K +SDFG ++
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 929 LKPDSSNWSELAG--TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + S G ++A E + + DV++FGVL+ E++ G +P
Sbjct: 200 VYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L++V EY+ G + + L AE R + + Y+H +++RD+
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFAEP--HARFYAAQ-IVLTFEYLHS---LDLIYRDLKP 169
Query: 908 KKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGV 967
+ +L+D + V+DFG AK +K W L GT Y+APE+ + N+ D + GV
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 968 LVLEVIEGKHP 978
L+ E+ G P
Sbjct: 227 LIYEMAAGYPP 237
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G GTV G AVK++ + +I + + ++E + H N++++Y CS
Sbjct: 24 GYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIALMEIKLLTESDD--HPNVIRYY--CSE 78
Query: 845 TQHLFLVYEYLERGSL---ATILSNEATAAELDWSKRVN---VIKGVANALSYMHHDCFP 898
T FL Y LE +L + S + L K N +++ +A+ ++++H
Sbjct: 79 TTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---L 134
Query: 899 PILHRDISSKKVLL--------DLEYKAH-----VSDFGTAKFLKPDSS----NWSELAG 941
I+HRD+ + +L+ D + A +SDFG K L S N + +G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG 194
Query: 942 TCGYIAPE-------LAYTMRANEKCDVFNFGVLVLEVI-EGKHP 978
T G+ APE L R D+F+ G + ++ +GKHP
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 25/155 (16%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRV------- 879
IT+I++ + G ++ ++++YEY+E S IL + LD +
Sbjct: 97 ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS---ILKFDEYFFVLDKNYTCFIPIQVI 153
Query: 880 -NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938
+IK V N+ SY+H++ I HRD+ +L+D + +SDFG ++++ S
Sbjct: 154 KCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR 211
Query: 939 LAGTCGYIAPELAYTMRANE------KCDVFNFGV 967
GT ++ PE +NE K D+++ G+
Sbjct: 212 --GTYEFMPPEFF----SNESSYNGAKVDIWSLGI 240
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 12/189 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHS--LPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A T+G A+K ++ L ++ + +S + +RH +I+K Y
Sbjct: 13 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 72
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ +V EY I+ + + + + + + +A+ Y H I+
Sbjct: 73 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIV 125
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LAYTMRANEKC 960
HRD+ + +LLD ++DFG + + D + G+ Y APE ++ + A +
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 184
Query: 961 DVFNFGVLV 969
DV++ GV++
Sbjct: 185 DVWSCGVIL 193
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 12/189 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHS--LPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A T+G A+K ++ L ++ + +S + +RH +I+K Y
Sbjct: 17 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 76
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ +V EY I+ + + + + + + +A+ Y H I+
Sbjct: 77 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIV 129
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LAYTMRANEKC 960
HRD+ + +LLD ++DFG + + D + G+ Y APE ++ + A +
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 188
Query: 961 DVFNFGVLV 969
DV++ GV++
Sbjct: 189 DVWSCGVIL 197
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
IV+ G C + L LV E G L L + E+ S ++ V+ + Y+
Sbjct: 398 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEE 454
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG---TCGYIAPELA 951
F +HR+++++ VLL + A +SDFG +K L D S ++ + + APE
Sbjct: 455 KNF---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 511
Query: 952 YTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ + + DV+++GV + E + G+ P
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W+ L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 820 QKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
++ F+ E +R H +IVK G + ++++ E G L + L + LD +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLA 111
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ ++ AL+Y+ F +HRDI+++ VL+ + DFG +++++ DS+ +
Sbjct: 112 SLILYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 167
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE R DV+ FGV + E++
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 820 QKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
++ F+ E +R H +IVK G + ++++ E G L + L + LD +
Sbjct: 60 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLA 116
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ ++ AL+Y+ F +HRDI+++ VL+ + DFG +++++ DS+ +
Sbjct: 117 SLILYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 172
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE R DV+ FGV + E++
Sbjct: 173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 12/189 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHS--LPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A T+G A+K ++ L ++ + +S + +RH +I+K Y
Sbjct: 22 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 81
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ +V EY I+ + + + + + + +A+ Y H I+
Sbjct: 82 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIV 134
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LAYTMRANEKC 960
HRD+ + +LLD ++DFG + + D + G+ Y APE ++ + A +
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 193
Query: 961 DVFNFGVLV 969
DV++ GV++
Sbjct: 194 DVWSCGVIL 202
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 799 SGDTRAVKKL-HSLPTGEIGINQKGFVSEITEIR--HRN-IVKFYG--FCSHTQHLFLVY 852
+G AVK+L HS P Q+ F EI ++ H + IVK+ G + L LV
Sbjct: 35 TGALVAVKQLQHSGPD-----QQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVM 89
Query: 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYM-HHDCFPPILHRDISSKKVL 911
EYL G L L A LD S+ + + + Y+ C +HRD++++ +L
Sbjct: 90 EYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNIL 143
Query: 912 LDLEYKAHVSDFGTAKFLKPDSSNW---SELAGTCGYIAPELAYTMRANEKCDVFNFGVL 968
++ E ++DFG AK L D + APE + + DV++FGV+
Sbjct: 144 VESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 203
Query: 969 VLEV 972
+ E+
Sbjct: 204 LYEL 207
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 18/192 (9%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHS--LPTGEIGINQKGFVSEITEIRHRNIVKFYGF 841
G G G V A T+G A+K ++ L ++ + +S + +RH +I+K Y
Sbjct: 23 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 82
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ +V EY I+ + + + + + + +A+ Y H I+
Sbjct: 83 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIV 135
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCG---YIAPE-LAYTMRAN 957
HRD+ + +LLD ++DFG + + ++ + L +CG Y APE ++ + A
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 958 EKCDVFNFGVLV 969
+ DV++ GV++
Sbjct: 192 PEVDVWSCGVIL 203
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 820 QKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
++ F+ E +R H +IVK G + ++++ E G L + L + LD +
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLA 491
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ ++ AL+Y+ F +HRDI+++ VL+ + DFG +++++ DS+ +
Sbjct: 492 SLILYAYQLSTALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYY 547
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE R DV+ FGV + E++
Sbjct: 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W+ L GT Y+APE+ + N+
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEIILSKGYNKA 204
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 205 VDWWALGVLIYEMAAGYPP 223
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 820 QKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
++ F+ E +R H +IVK G + ++++ E G L + L + LD +
Sbjct: 58 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLA 114
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ ++ AL+Y+ F +HRDI+++ VL+ + DFG +++++ DS+ +
Sbjct: 115 SLILYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 170
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE R DV+ FGV + E++
Sbjct: 171 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+S + +RH +I+K Y + + +V EY G L + + E D +R +
Sbjct: 60 ISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTE-DEGRRF--FQ 115
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTC 943
+ A+ Y H I+HRD+ + +LLD ++DFG + + D + G+
Sbjct: 116 QIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSP 171
Query: 944 GYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGKHP 978
Y APE+ + A + DV++ G+++ ++ G+ P
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
++H NIV+ + S H +L+++ + G L + +E D S + I+ + A+
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAV 123
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYK---AHVSDFGTAKFLKPDSSNWSELAGTCGYI 946
+ H ++HR++ + +LL + K ++DFG A ++ + W AGT GY+
Sbjct: 124 LHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYL 180
Query: 947 APELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+PE+ + D++ GV++ ++ G P
Sbjct: 181 SPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGF--- 841
G G G V++ L G++ AVK S E ++ + +RH NI+ F
Sbjct: 17 GKGRYGEVWRG-LWHGESVAVKIFSS--RDEQSWFRETEIYNTVLLRHDNILGFIASDMT 73
Query: 842 --CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCF-- 897
S TQ L+L+ Y E GSL L + L + R+ V A L+++H + F
Sbjct: 74 SRNSSTQ-LWLITHYHEHGSLYDFLQRQTLEPHL--ALRLAV--SAACGLAHLHVEIFGT 128
Query: 898 ---PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA-----GTCGYIAPE 949
P I HRD S+ VL+ + ++D G A + S++ ++ GT Y+APE
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 950 -LAYTMRAN-----EKCDVFNFGVLVLEV 972
L +R + + D++ FG+++ E+
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 830 IRHRNIVKFYGFCSHT----QHLFLVYEYLERGSLATILSN---EATAAELDWSKRVNVI 882
++H NIV+FY T + + LV E G+L T L W +++ +
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI--L 139
Query: 883 KGVANALSYMHHDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAG 941
KG L ++H PPI+HRD+ + + + D G A + +S + G
Sbjct: 140 KG----LQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIG 192
Query: 942 TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
T + APE Y + +E DV+ FG LE ++P
Sbjct: 193 TPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 197 GSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKS 256
S+P+ I + YL + NQ++ P +L NLK LYL N+L S
Sbjct: 32 ASVPAGIPTNAQILYL--HDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89
Query: 257 LLYLYLSHNQLNGSLPSS-FGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQ 315
L L L NQL LPS+ F L LK L + NKL+ +P+ I L L+HL L + Q
Sbjct: 90 LTVLDLGTNQLT-VLPSAVFDRLVHLKELFM-CCNKLT-ELPRGIERLTHLTHLALDQNQ 146
Query: 316 LSGFIPPSLGNLSNIRGLYIREN 338
L + LS++ Y+ N
Sbjct: 147 LKSIPHGAFDRLSSLTHAYLFGN 169
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 166 LHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEI-GNLRSLSYLGLNKNQLSGSIP 224
LH N + + P L NL +YL +N++ G++P + +L L+ L L NQL ++
Sbjct: 47 LHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQL--TVL 103
Query: 225 PTA--GNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLK 282
P+A L +LK L++ N+L+ +P + L +L L NQL +F LSSL
Sbjct: 104 PSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLT 162
Query: 283 HLHV 286
H ++
Sbjct: 163 HAYL 166
Score = 35.8 bits (81), Expect = 0.14, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 29 LDLSVNQLFGTIPTQI-SHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGL 87
L L NQL G +P + L++L LD TNQ + + L +L L + N+L L
Sbjct: 69 LYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTEL 127
Query: 88 IPEELGELTSLNELALSYNRLNGSIP 113
P + LT L LAL N+L SIP
Sbjct: 128 -PRGIERLTHLTHLALDQNQLK-SIP 151
Score = 33.9 bits (76), Expect = 0.50, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 32/80 (40%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLI 88
L L NQ+ P L LK L +NQ + LT L VL L NQL L
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLP 104
Query: 89 PEELGELTSLNELALSYNRL 108
L L EL + N+L
Sbjct: 105 SAVFDRLVHLKELFMCCNKL 124
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 42/174 (24%)
Query: 69 GILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNRLNGSIPAXXXXXXXXXXXXXX 128
GI TN +L L NQ+ L P L +L EL L N+L G++P
Sbjct: 37 GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGV------------ 83
Query: 129 XXXXXXXIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFV 188
+L + L TN + + L +L +
Sbjct: 84 --------------------------FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKEL 117
Query: 189 YLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTA-GNLSNLKFLYLHDN 241
++ N++ +P I L L++L L++NQL SIP A LS+L YL N
Sbjct: 118 FMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRLSSLTHAYLFGN 169
Score = 31.2 bits (69), Expect = 2.8, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 577 ANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEI 636
+N+L L L +L L+L NQ + S +LV L +L + N L +P I
Sbjct: 73 SNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKL-TELPRGI 131
Query: 637 CNLESLEYMNLLQNKLSGPIPSCFRRMHGLS 667
L L ++ L QN+L F R+ L+
Sbjct: 132 ERLTHLTHLALDQNQLKSIPHGAFDRLSSLT 162
Score = 30.0 bits (66), Expect = 6.2, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 328 SNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIP-HCLGNLSNLKFFALREN 386
+N + LY+ +N + P L +L +L L N+L G++P +L+ L L N
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTN 98
Query: 387 ELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNF 436
+L+ + + L + + N+ T LP+ + + LTH ++ N
Sbjct: 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL 147
Score = 30.0 bits (66), Expect = 7.5, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 357 LSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEI-ENMKKLNKYLLFENQFTGY 415
L L N++ P +L NLK L N+L G++P + +++ +L L NQ T
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT-V 102
Query: 416 LPQNVCQSGSLTHFS--VRNNNFVGPIPRSLQNCTSLYSLRLERNQL 460
LP V L H N + +PR ++ T L L L++NQL
Sbjct: 103 LPSAVFDR--LVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQL 147
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 239
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Query: 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFY 839
K + G G G V+K E T+ + K+ + K +S + ++ H N+++ Y
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLY 152
Query: 840 GFCSHTQHLFLVYEYLERGSL-ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFP 898
+ LV EY++ G L I+ ELD + +K + + +MH
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD---TILFMKQICEGIRHMHQ---M 206
Query: 899 PILHRDISSKKVL-LDLEYKA-HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRA 956
ILH D+ + +L ++ + K + DFG A+ KP GT ++APE+
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFV 265
Query: 957 NEKCDVFNFGVLVLEVIEGKHP 978
+ D+++ GV+ ++ G P
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSP 287
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 239
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVK-----KLHSLPTGEIGINQKGFVSEITEIRHRNIVKF 838
GTG G V + + +G+ A+K K+ L E +N+K + + +VK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKL 106
Query: 839 YGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFP 898
+L++V EY+ G + + L +E R + + Y+H
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYLHS---L 160
Query: 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNK 217
Query: 959 KCDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 820 QKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
++ F+ E +R H +IVK G + ++++ E G L + L + LD +
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLA 491
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ ++ AL+Y+ F +HRDI+++ VL+ + DFG +++++ DS+ +
Sbjct: 492 SLILYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 547
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE R DV+ FGV + E++
Sbjct: 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 29/204 (14%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G G G V+K +G A+KK L + + + +K + EI +++H N+V
Sbjct: 12 GEGSYGVVFKCRNRDTGQIVAIKKF--LESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKR---VNVIKGVA----NALSYMH 893
+ L LV+EY + T+L ELD +R +++K + A+++ H
Sbjct: 70 VFRRKRRLHLVFEYCDH----TVLH------ELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 894 -HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAY 952
H+C +HRD+ + +L+ + DFG A+ L S + + T Y +PEL
Sbjct: 120 KHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLV 175
Query: 953 -TMRANEKCDVFNFGVLVLEVIEG 975
+ DV+ G + E++ G
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 765 DVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFV 824
D +N++ LS FE + L G G VY+ + + +K ++L + +++K
Sbjct: 44 DGSNRDALS-DFFEVESEL-GRGATSIVYRCK-----QKGTQKPYALKVLKKTVDKKIVR 96
Query: 825 SEI---TEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNV 881
+EI + H NI+K + LV E + G L + + +E D + +
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA---DA 153
Query: 882 IKGVANALSYMHHDCFPPILHRDISSKKVLLDL---EYKAHVSDFGTAKFLKPDSSNWSE 938
+K + A++Y+H + I+HRD+ + +L + ++DFG +K ++
Sbjct: 154 VKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKT 209
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT GY APE+ + D+++ G++ ++ G P
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVK-----KLHSLPTGEIGINQKGFVSEITEIRHRNIVKF 838
GTG G V + + +G+ A+K K+ L E +N+K + + +VK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKL 106
Query: 839 YGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFP 898
+L++V EY+ G + + L +E R + + Y+H
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYLHS---L 160
Query: 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNK 217
Query: 959 KCDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 22/177 (12%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G G G VYKA + + +T A+K++ L E G+ VS + E++HRNI++
Sbjct: 43 GEGTYGEVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 842 CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRV--NVIKGVANALSYMH-HDCFP 898
H L L++EY E + N D S RV + + + N +++ H C
Sbjct: 102 IHHNHRLHLIFEYAENDLKKYMDKNP------DVSMRVIKSFLYQLINGVNFCHSRRC-- 153
Query: 899 PILHRDISSKKVLLDLEYKAH-----VSDFGTAKFLKPDSSNWSELAGTCGYIAPEL 950
LHRD+ + +LL + + + DFG A+ ++ T Y PE+
Sbjct: 154 --LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEI 208
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVK-----KLHSLPTGEIGINQKGFVSEITEIRHRNIVKF 838
GTG G V + + +G+ A+K K+ L E +N+K + + +VK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKL 106
Query: 839 YGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFP 898
+L++V EY+ G + + L +E R + + Y+H
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYLHS---L 160
Query: 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNK 217
Query: 959 KCDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVK-----KLHSLPTGEIGINQKGFVSEITEIRHRNIVKF 838
GTG G V + + +G+ A+K K+ L E +N+K + + +VK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKL 106
Query: 839 YGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFP 898
+L++V EY+ G + + L +E R + + Y+H
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYLHS---L 160
Query: 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNK 217
Query: 959 KCDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 213
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 214 VDWWALGVLIYEMAAGYPP 232
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 46/224 (20%)
Query: 783 LHGTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFY 839
L G+GG G V+KA+ G T ++++ N+K V + ++ H NIV +
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKY-------NNEKAEREVKALAKLDHVNIVHYN 71
Query: 840 GFC------------------------------SHTQHLFLVYEYLERGSLATILSNEAT 869
G C S T+ LF+ E+ ++G+L +
Sbjct: 72 G-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-R 129
Query: 870 AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL 929
+LD + + + + + Y+H ++HRD+ + L + + DFG L
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 930 KPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
K D + GT Y++PE + ++ D++ G+++ E++
Sbjct: 187 KNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 44/227 (19%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G GTV G AVK++ + +I + + ++E + H N++++Y CS
Sbjct: 24 GYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIALMEIKLLTESDD--HPNVIRYY--CSE 78
Query: 845 TQHLFLVYEYLERGSL---ATILSNEATAAELDWSKRVN---VIKGVANALSYMHHDCFP 898
T FL Y LE +L + S + L K N +++ +A+ ++++H
Sbjct: 79 TTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---L 134
Query: 899 PILHRDISSKKVLL--------DLEYKAH-----VSDFGTAKFLKPDS------SNWSEL 939
I+HRD+ + +L+ D + A +SDFG K K DS N +
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNLNNP 192
Query: 940 AGTCGYIAPE-------LAYTMRANEKCDVFNFGVLVLEVI-EGKHP 978
+GT G+ APE L R D+F+ G + ++ +GKHP
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 820 QKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
++ F+ E +R H +IVK G + ++++ E G L + L + LD +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLA 111
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ ++ AL+Y+ F +HRDI+++ VL+ + DFG +++++ DS+ +
Sbjct: 112 SLILYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 167
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE R DV+ FGV + E++
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 820 QKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
++ F+ E +R H +IVK G + ++++ E G L + L + LD +
Sbjct: 52 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLA 108
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ ++ AL+Y+ F +HRDI+++ VL+ + DFG +++++ DS+ +
Sbjct: 109 SLILYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 164
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE R DV+ FGV + E++
Sbjct: 165 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 820 QKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
++ F+ E +R H +IVK G + ++++ E G L + L + LD +
Sbjct: 57 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLA 113
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ ++ AL+Y+ F +HRDI+++ VL+ + DFG +++++ DS+ +
Sbjct: 114 SLILYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 169
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE R DV+ FGV + E++
Sbjct: 170 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+RH NIV+F HL +V EY G L + N +E + + + + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSE---DEARFFFQQLISGV 128
Query: 890 SYMHHDCFPPILHRDISSKKVLLD--LEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIA 947
SY H + HRD+ + LLD + ++DFG +K S S + GT YIA
Sbjct: 129 SYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV-GTPAYIA 184
Query: 948 PELAYTMRANEK-CDVFNFGVLVLEVIEGKHP 978
PE+ + K DV++ GV + ++ G +P
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 820 QKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
++ F+ E +R H +IVK G + ++++ E G L + L + LD +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLA 111
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ ++ AL+Y+ F +HRDI+++ VL+ + DFG +++++ DS+ +
Sbjct: 112 SLILYAYQLSTALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYY 167
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE R DV+ FGV + E++
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 30/174 (17%)
Query: 832 HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNE-----------ATAAELDWSKRVN 880
H NIV G C+ + ++L++EY G L L ++ L+ + +N
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 881 VIK---------GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKP 931
V+ VA + ++ F +HRD++++ VL+ + DFG A+ +
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 932 DSSNWSELAGT---CGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
D SN+ ++APE + K DV+++G+L+ E+ +PG
Sbjct: 225 D-SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 785 GTGGCGTVYKA-ELTSGDTR----AVKKLHSL--PTGEIGINQKGFVSEITEIRHRNIVK 837
G+G GTVYK + G+T A+K L+ P + + + + + H ++V+
Sbjct: 47 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI--MASMDHPHLVR 104
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRVNVIKGVANALSYMH 893
G C + + LV + + G L + N + L+W ++ A + Y+
Sbjct: 105 LLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 157
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT--CGYIAPELA 951
++HRD++++ VL+ ++DFG A+ L+ D ++ G ++A E
Sbjct: 158 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 952 YTMRANEKCDVFNFGVLVLEVI 973
+ + + DV+++GV + E++
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELM 236
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 785 GTGGCGTVYKA-ELTSGDTR----AVKKLHSL--PTGEIGINQKGFVSEITEIRHRNIVK 837
G+G GTVYK + G+T A+K L+ P + + + + + H ++V+
Sbjct: 24 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI--MASMDHPHLVR 81
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRVNVIKGVANALSYMH 893
G C + + LV + + G L + N + L+W ++ A + Y+
Sbjct: 82 LLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 134
Query: 894 HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT--CGYIAPELA 951
++HRD++++ VL+ ++DFG A+ L+ D ++ G ++A E
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 952 YTMRANEKCDVFNFGVLVLEVI 973
+ + + DV+++GV + E++
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELM 213
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 205
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 206 VDWWALGVLIYEMAAGYPP 224
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR---HRNIVKFYGFCSHT--QHLFLVYE 853
+G+ AVK L ++ + G+ EI +R H +IVK+ G C + + LV E
Sbjct: 36 TGEMVAVKALKEGCGPQL---RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 92
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
Y+ GSL L ++ + + + ++Y+H + +HR ++++ VLLD
Sbjct: 93 YVPLGSLRDYLPRHCVGL----AQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLD 145
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSELA----GTCGYIAPELAYTMRANEKCDVFNFGVLV 969
+ + DFG AK + P+ + + + APE + DV++FGV +
Sbjct: 146 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTL 204
Query: 970 LEVI 973
E++
Sbjct: 205 YELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 799 SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR---HRNIVKFYGFCSHT--QHLFLVYE 853
+G+ AVK L ++ + G+ EI +R H +IVK+ G C + + LV E
Sbjct: 37 TGEMVAVKALKEGCGPQL---RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 93
Query: 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913
Y+ GSL L ++ + + + ++Y+H + +HR ++++ VLLD
Sbjct: 94 YVPLGSLRDYLPRHCVGL----AQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLD 146
Query: 914 LEYKAHVSDFGTAKFLKPDSSNWSELA----GTCGYIAPELAYTMRANEKCDVFNFGVLV 969
+ + DFG AK + P+ + + + APE + DV++FGV +
Sbjct: 147 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTL 205
Query: 970 LEVI 973
E++
Sbjct: 206 YELL 209
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +++D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 34/220 (15%)
Query: 787 GGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR----HRNIVKFYGF 841
GG VY+A+ + SG A+K+L S + + + E+ ++ H NIV+F
Sbjct: 39 GGFAFVYEAQDVGSGREYALKRLLSNEEEK----NRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 842 CS-------HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
S Q FL+ L +G L L + L + + A+ +MH
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK--PDSSNWSELA-----------G 941
PPI+HRD+ + +LL + + DFG+A + PD S WS
Sbjct: 155 Q-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS-WSAQRRALVEEEITRNT 212
Query: 942 TCGYIAPE---LAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
T Y PE L EK D++ G ++ + +HP
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +++D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 192 NNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKL 251
+N + +I + I L+ L LN N L+ +P NLSNL+ L L NRL+ +P +L
Sbjct: 232 SNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAEL 289
Query: 252 GSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHV 286
GS L Y Y N + +LP FGNL +L+ L V
Sbjct: 290 GSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 151 IPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLS 210
+P ++ NL + + L N + +P LG L + Y +N +V ++P E GNL +L
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDN-MVTTLPWEFGNLCNLQ 319
Query: 211 YLGLNKNQLSGSIPP--TAGNLSNLKFLYLHDNR 242
+LG+ N L T +++ L F YL DNR
Sbjct: 320 FLGVEGNPLEKQFLKILTEKSVTGLIF-YLRDNR 352
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 175 IPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLK 234
+P + L NL + L++NR+ S+P+E+G+ L Y N ++ ++P GNL NL+
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQ 319
Query: 235 FLYLHDNRLSGYIPPKLGSFKSL--LYLYLSHNQLNGSLP 272
FL + N L K+ + KS+ L YL N+ LP
Sbjct: 320 FLGVEGNPLEKQF-LKILTEKSVTGLIFYLRDNRPEIPLP 358
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 306 LSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLN 365
L+ L+L+ L+ +P + NLSN+R L + N L S+P ELG L N +
Sbjct: 249 LTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQLKYFYFFDNMVT 306
Query: 366 GSIPHCLGNLSNLKFFALRENEL 388
++P GNL NL+F + N L
Sbjct: 307 -TLPWEFGNLCNLQFLGVEGNPL 328
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 477 LDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVG 534
LDLSN F IS+N K L L + GN ++ +P+EI N++ L LD S NRL
Sbjct: 229 LDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS 284
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 584 IPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLE 643
I N+ + L L L+ N + E+ +I L L LDLSHN L ++P+E+ + L+
Sbjct: 239 ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQLK 296
Query: 644 YMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQ 677
Y N ++ +P F + L + V N L+
Sbjct: 297 YFYFFDNMVTT-LPWEFGNLCNLQFLGVEGNPLE 329
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 37/220 (16%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIR-HRNIVKFYG 840
G G G V+K+ + +G+ AVKK+ Q+ F + +TE+ H NIV
Sbjct: 18 GKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDA-QRTFREIMILTELSGHENIVNLLN 76
Query: 841 F--CSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFP 898
+ + ++LV++Y+E A I +N + V+ + + Y+H
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY-----VVYQLIKVIKYLHSGG-- 129
Query: 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKF---------------------LKPDSSNWS 937
+LHRD+ +LL+ E V+DFG ++ D +
Sbjct: 130 -LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 938 ELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
+ T Y APE+ + + + D+++ G ++ E++ GK
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 820 QKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
++ F+ E +R H +IVK G + ++++ E G L + L + LD +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLA 111
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936
+ ++ AL+Y+ F +HRDI+++ VL+ + DFG +++++ DS+
Sbjct: 112 SLILYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXX 167
Query: 937 SELAGT--CGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++APE R DV+ FGV + E++
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 127/282 (45%), Gaps = 30/282 (10%)
Query: 206 LRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHN 265
L +L YL LN NQ++ P NL L LY+ N+++ L + +L LYL N
Sbjct: 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYL--N 118
Query: 266 QLNGSLPSSFGNLSSLKHLHV---HNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPP 322
+ N S S NL+ L++ HN++ LS + N L++L ++++++ P
Sbjct: 119 EDNISDISPLANLTKXYSLNLGANHNLSDLS-----PLSNXTGLNYLTVTESKVKDVTP- 172
Query: 323 SLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFA 382
+ NL+++ L + N + P L L SL + VN++ P + N + L
Sbjct: 173 -IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSLK 227
Query: 383 LRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRN--NNFVGPI 440
+ N+++ P + N+ +L + NQ + ++ LT N +N + I
Sbjct: 228 IGNNKITDLSP--LANLSQLTWLEIGTNQIS-----DINAVKDLTKLKXLNVGSNQISDI 280
Query: 441 PRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNN 482
L N + L SL L NQL EV G +L L LS N
Sbjct: 281 -SVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQN 321
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 20/264 (7%)
Query: 155 LGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGL 214
L NL ++ + TN + + +L L NL +YLN + I S S + NL L L
Sbjct: 84 LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNI--SDISPLANLTKXYSLNL 139
Query: 215 NKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSS 274
N + P + N + L +L + ++++ P + + L L L++NQ+ P
Sbjct: 140 GANHNLSDLSPLS-NXTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-- 194
Query: 275 FGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLY 334
+L+SL + + +N+++ P + N L+ L + +++ P L NLS + L
Sbjct: 195 LASLTSLHYFTAY-VNQITDITP--VANXTRLNSLKIGNNKITDLSP--LANLSQLTWLE 249
Query: 335 IRENMLYGSIPEELGRLKSLSQLS-LSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIP 393
I N + ++ +K L++L L+V S L NLS L L N+L
Sbjct: 250 IGTNQI-----SDINAVKDLTKLKXLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDX 304
Query: 394 QEIENMKKLNKYLLFENQFTGYLP 417
+ I + L L +N T P
Sbjct: 305 EVIGGLTNLTTLFLSQNHITDIRP 328
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 148/370 (40%), Gaps = 93/370 (25%)
Query: 278 LSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRE 337
L++L++L++ N N+++ P + NL L++L++ +++ +L NL+N+R LY+ E
Sbjct: 65 LTNLEYLNL-NGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNE 119
Query: 338 NMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIE 397
+ + P L L L+L N N S L N + L + + E+++ P I
Sbjct: 120 DNISDISP--LANLTKXYSLNLGANH-NLSDLSPLSNXTGLNYLTVTESKVKDVTP--IA 174
Query: 398 NMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLER 457
N+ L L NQ P + SL +F+ N P + N T L SL++
Sbjct: 175 NLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGN 230
Query: 458 NQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIG 517
N++T +L L+N QL L +G N+IS + +
Sbjct: 231 NKIT-------------DLSPLAN-------------LSQLTWLEIGTNQISDI--NAVK 262
Query: 518 NMTQLHKLDFSSNRLVGQIPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXXXXXXXXSA 577
++T+L L+ SN++ DI
Sbjct: 263 DLTKLKXLNVGSNQI-------------------------SDISV--------------- 282
Query: 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIP-SEI 636
L L +L+ L L+NNQ E IG L L+ L LS N + P + +
Sbjct: 283 ----------LNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRPLASL 332
Query: 637 CNLESLEYMN 646
+S ++ N
Sbjct: 333 SKXDSADFAN 342
Score = 29.6 bits (65), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLR---LSVNQ 83
+L++ NQ+ + L+KLK L+ +NQ S I +L NL L L+ NQ
Sbjct: 246 TWLEIGTNQISDI--NAVKDLTKLKXLNVGSNQIS-----DISVLNNLSQLNSLFLNNNQ 298
Query: 84 LNGLIPEELGELTSLNELALSYNRLNGSIP 113
L E +G LT+L L LS N + P
Sbjct: 299 LGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 73 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILSNEA------TAAELDWSKRVNVIK------- 883
G C+ L ++ E+ + G+L+T L ++ A D K ++
Sbjct: 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 192
Query: 884 GVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELA 940
VA + ++ C +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 193 QVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
++APE + + DV++FGVL+ E+
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 281
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +++D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIISKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 831 RHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALS 890
+H NI+ +++++V E ++ G L + + +E + S V+ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASA---VLFTITKTVE 130
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEY----KAHVSDFGTAKFLKPDSSNWSELAGTCGYI 946
Y+H ++HRD+ +L E + DFG AK L+ ++ T ++
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 947 APELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
APE+ + CD+++ GVL+ ++ G P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +++D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 155 LGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGL 214
+ L+S ++ L + + V P L GL NL +YL+ N+I P + L +L YL +
Sbjct: 103 IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158
Query: 215 NKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLP 272
Q+S P NLS L L DN++S P L S +L+ ++L +NQ++ P
Sbjct: 159 GNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP 212
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 44 ISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELAL 103
I+ L +K LD ++ Q + + P + L+NL VL L +NQ+ + P L LT+L L++
Sbjct: 103 IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +++D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +++D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +++D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +++D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +++D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +++D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 128/315 (40%), Gaps = 23/315 (7%)
Query: 190 LNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPP 249
L NRI E + L L LN+N +S P NL NL+ L L NRL IP
Sbjct: 39 LGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIP- 96
Query: 250 KLGSF---KSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSL 306
LG F +L L +S N++ L F +L +LK L V + N L + L SL
Sbjct: 97 -LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGD-NDLVYISHRAFSGLNSL 154
Query: 307 SHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLS-VNKLN 365
L L K L+ +L +L + L +R + RL L L +S L+
Sbjct: 155 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLD 214
Query: 366 GSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGS 425
P+CL L NL ++ L+ + ++ YL F N Y P + + GS
Sbjct: 215 TMTPNCLYGL-NLTSLSITHCNLTAVPYLAVRHL----VYLRFLN--LSYNPISTIE-GS 266
Query: 426 LTH--FSVRNNNFVG-----PIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLD 478
+ H ++ VG P + + L L + NQLT VF +LE L
Sbjct: 267 MLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLI 326
Query: 479 LSNNNFFGEISSNWI 493
L +N + W+
Sbjct: 327 LDSNPLACDCRLLWV 341
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 10/257 (3%)
Query: 152 PQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSY 211
P NL + ++ L +N + GL NLT + ++ N+IV + +L +L
Sbjct: 73 PGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKS 132
Query: 212 LGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSL 271
L + N L L++L+ L L L+ L L+ L L H +N
Sbjct: 133 LEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192
Query: 272 PSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIR 331
SF L LK L + + L P + L +L+ L ++ L+ ++ +L +R
Sbjct: 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLAVRHLVYLR 251
Query: 332 GLYIREN---MLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENEL 388
L + N + GS+ EL RL+ ++ L +L P+ L+ L+ + N+L
Sbjct: 252 FLNLSYNPISTIEGSMLHELLRLQ---EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQL 308
Query: 389 SG---SIPQEIENMKKL 402
+ S+ + N++ L
Sbjct: 309 TTLEESVFHSVGNLETL 325
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 1/151 (0%)
Query: 234 KFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLS 293
+ L L NR+ + SF L L L+ N ++ P +F NL +L+ L + + N+L
Sbjct: 35 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS-NRLK 93
Query: 294 GSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKS 353
L +L+ L +S+ ++ + +L N++ L + +N L L S
Sbjct: 94 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 153
Query: 354 LSQLSLSVNKLNGSIPHCLGNLSNLKFFALR 384
L QL+L L L +L L LR
Sbjct: 154 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLR 184
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 25/64 (39%)
Query: 469 GIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFS 528
GI + LLDL N + P L L + N +S P N+ L L
Sbjct: 29 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 88
Query: 529 SNRL 532
SNRL
Sbjct: 89 SNRL 92
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 772 LSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPT----------GE-IGINQ 820
++ +TF VL G GG G E+ + RA K+++ GE + +N+
Sbjct: 181 VTKNTFRQYRVL-GKGGFG-----EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNE 234
Query: 821 KGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN 880
K + ++ R +V L LV + G L + + A ++ V
Sbjct: 235 KQILEKVN---SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVF 290
Query: 881 VIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA 940
+ L +H + I++RD+ + +LLD +SD G A + P+
Sbjct: 291 YAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRV 346
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT GY+APE+ R D + G L+ E+I G+ P
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 33/226 (14%)
Query: 771 LLSASTFEGKMVLH---GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI 827
LL T +VL G G G V++ + G+ AVK S E ++ + +
Sbjct: 21 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS--REERSWFREAEIYQT 77
Query: 828 TEIRHRNIVKFYGFCSHTQ----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+RH NI+ F + L+LV +Y E GSL L+ E + +
Sbjct: 78 VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLAL 133
Query: 884 GVANALSYMHHDCF-----PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS- 937
A+ L+++H + P I HRD+ SK +L+ ++D G A ++ DS+ +
Sbjct: 134 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTI 191
Query: 938 -----ELAGTCGYIAPEL---AYTMRANE---KCDVFNFGVLVLEV 972
GT Y+APE+ + M+ E + D++ G++ E+
Sbjct: 192 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 33/226 (14%)
Query: 771 LLSASTFEGKMVLH---GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI 827
LL T +VL G G G V++ + G+ AVK S E ++ + +
Sbjct: 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS--REERSWFREAEIYQT 90
Query: 828 TEIRHRNIVKFYGFCSHTQ----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+RH NI+ F + L+LV +Y E GSL L+ E + +
Sbjct: 91 VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLAL 146
Query: 884 GVANALSYMHHDCF-----PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS- 937
A+ L+++H + P I HRD+ SK +L+ ++D G A ++ DS+ +
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTI 204
Query: 938 -----ELAGTCGYIAPEL---AYTMRANE---KCDVFNFGVLVLEV 972
GT Y+APE+ + M+ E + D++ G++ E+
Sbjct: 205 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ ++ G P
Sbjct: 219 VDWWALGVLIYQMAAGYPP 237
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 29/169 (17%)
Query: 775 STFEGKMVLHGTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF-VSEITEIR- 831
S +E K+ G G G V+KA +G A+KK+ L E ++GF ++ + EI+
Sbjct: 18 SKYE-KLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENE----KEGFPITALREIKI 70
Query: 832 -----HRNIVKFYGFCSHTQH--------LFLVYEYLERGSLATILSNEATAAELDWSKR 878
H N+V C ++LV+++ E LA +LSN L KR
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR 129
Query: 879 VNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
V ++ + N L Y+H + ILHRD+ + VL+ + ++DFG A+
Sbjct: 130 V--MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 18/156 (11%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+RH NIV+F HL ++ EY G L + N +E + + + + +
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSE---DEARFFFQQLLSGV 129
Query: 890 SYMHHDCFPPILHRDISSKKVLLD--LEYKAHVSDFGTAK----FLKPDSSNWSELAGTC 943
SY H I HRD+ + LLD + + DFG +K +P S+ GT
Sbjct: 130 SYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTP 181
Query: 944 GYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGKHP 978
YIAPE+ + K DV++ GV + ++ G +P
Sbjct: 182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 772 LSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPT----------GE-IGINQ 820
++ +TF VL G GG G E+ + RA K+++ GE + +N+
Sbjct: 181 VTKNTFRQYRVL-GKGGFG-----EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNE 234
Query: 821 KGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVN 880
K + ++ R +V L LV + G L + + A ++ V
Sbjct: 235 KQILEKVN---SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVF 290
Query: 881 VIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA 940
+ L +H + I++RD+ + +LLD +SD G A + P+
Sbjct: 291 YAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRV 346
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT GY+APE+ R D + G L+ E+I G+ P
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 815 EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELD 874
+I N K + +RH NIV+F HL +V EY G L + N +E
Sbjct: 57 KIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSE-- 114
Query: 875 WSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD--LEYKAHVSDFGTAK----F 928
+ + + + +SY H + HRD+ + LLD + + DFG +K
Sbjct: 115 -DEARFFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 170
Query: 929 LKPDSSNWSELAGTCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGKHP 978
+P S+ GT YIAPE+ + K DV++ GV + ++ G +P
Sbjct: 171 SQPKST-----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 774 ASTFEGKMVLH---GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEI 830
ST +VL G G G V++ + G+ AVK S E ++ + + +
Sbjct: 4 GSTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS--REERSWFREAEIYQTVML 60
Query: 831 RHRNIVKFYGFCSHTQ----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVA 886
RH NI+ F + L+LV +Y E GSL L+ E + + A
Sbjct: 61 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTA 116
Query: 887 NALSYMHHDCF-----PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS---- 937
+ L+++H + P I HRD+ SK +L+ ++D G A ++ DS+ +
Sbjct: 117 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIA 174
Query: 938 --ELAGTCGYIAPEL---AYTMRANE---KCDVFNFGVLVLEV 972
GT Y+APE+ + M+ E + D++ G++ E+
Sbjct: 175 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 28/164 (17%)
Query: 780 KMVLHGTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF-VSEITEIR------ 831
K+ G G G V+KA +G A+KK+ L E ++GF ++ + EI+
Sbjct: 22 KLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENE----KEGFPITALREIKILQLLK 75
Query: 832 HRNIVKFYGFCSHTQH--------LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
H N+V C ++LV+++ E LA +LSN L KRV ++
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQ 132
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
+ N L Y+H + ILHRD+ + VL+ + ++DFG A+
Sbjct: 133 MLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 34 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L +N A SK + + +A+ ++
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT----CGYI 946
Y++ + F +HRD++++ ++ ++ + DFG + + +++ G ++
Sbjct: 153 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWM 207
Query: 947 APELAYTMRANEKCDVFNFGVLVLEV 972
+PE DV++FGV++ E+
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 24 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L +N A SK + + +A+ ++
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT----CGYI 946
Y++ + F +HRD++++ ++ ++ + DFG + + +++ G ++
Sbjct: 143 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWM 197
Query: 947 APELAYTMRANEKCDVFNFGVLVLEV 972
+PE DV++FGV++ E+
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 29/171 (16%)
Query: 773 SASTFEGKMVLHGTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF-VSEITEI 830
S +E K+ G G G V+KA +G A+KK+ L E ++GF ++ + EI
Sbjct: 16 EVSKYE-KLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENE----KEGFPITALREI 68
Query: 831 R------HRNIVKFYGFCSHTQH--------LFLVYEYLERGSLATILSNEATAAELDWS 876
+ H N+V C ++LV+++ E LA +LSN L
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEI 127
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
KRV ++ + N L Y+H + ILHRD+ + VL+ + ++DFG A+
Sbjct: 128 KRV--MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 29/171 (16%)
Query: 773 SASTFEGKMVLHGTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF-VSEITEI 830
S +E K+ G G G V+KA +G A+KK+ L E ++GF ++ + EI
Sbjct: 15 EVSKYE-KLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENE----KEGFPITALREI 67
Query: 831 R------HRNIVKFYGFCSHTQH--------LFLVYEYLERGSLATILSNEATAAELDWS 876
+ H N+V C ++LV+++ E LA +LSN L
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEI 126
Query: 877 KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
KRV ++ + N L Y+H + ILHRD+ + VL+ + ++DFG A+
Sbjct: 127 KRV--MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 152 PQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSY 211
P + L++ V S N V+P+ G +++T +YL+ N+ +P E+ N + L+
Sbjct: 5 PTECTCLDTVVRCS---NKGLKVLPK--GIPRDVTELYLDGNQFT-LVPKELSNYKHLTL 58
Query: 212 LGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSL 271
+ L+ N++S + N++ L L L NRL P KSL L L N ++
Sbjct: 59 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVP 118
Query: 272 PSSFGNLSSLKHLHV 286
+F +LS+L HL +
Sbjct: 119 EGAFNDLSALSHLAI 133
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 151 IPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLS 210
IP+D+ L L N F+ ++P+ L K+LT + L+NNRI N+ L
Sbjct: 29 IPRDVTELY------LDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 81
Query: 211 YLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQL 267
L L+ N+L P T L +L+ L LH N +S +L +L + N L
Sbjct: 82 TLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 207 RSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQ 266
R ++ L L+ NQ + +P N +L + L +NR+S + LL L LS+N+
Sbjct: 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89
Query: 267 LNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHL 309
L P +F L SL+ L +H N +S +L +LSHL
Sbjct: 90 LRCIPPRTFDGLKSLRLLSLHG-NDISVVPEGAFNDLSALSHL 131
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 236 LYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGS 295
LYL N+ + +P +L ++K L + LS+N+++ SF N++ L L + + N+L
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL-ILSYNRLRCI 93
Query: 296 IPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLY 341
P+ LKSL L L +S + +LS + L I N LY
Sbjct: 94 PPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%)
Query: 583 LIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESL 642
L+PK L + L ++LSNN+ S + + QL L LS+N L P L+SL
Sbjct: 45 LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSL 104
Query: 643 EYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNEL 676
++L N +S F + LS + + N L
Sbjct: 105 RLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 36.6 bits (83), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 296 IPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLS 355
+PKE+ N K L+ + LS ++S S N++ + L + N L P LKSL
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 356 QLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTG 414
LSL N ++ +LS L A+ N L NM+ L+ ++ E + G
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC-----NMQWLSDWVKSEYKEPG 159
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 40 IPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLN 99
IP ++ L +LD NQF+ ++P ++ +L ++ LS N+++ L + +T L
Sbjct: 29 IPRDVTEL----YLD--GNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 81
Query: 100 ELALSYNRLNGSIP 113
L LSYNRL P
Sbjct: 82 TLILSYNRLRCIPP 95
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 36 GRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILS---NEATAAE------LDWSKRVNVIKGVAN 887
G C+ L ++ E+ + G+L+T L NE + L + VA
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAK 155
Query: 888 ALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELAGTCGY 945
+ ++ +HRD++++ +LL + + DFG A+ + PD + +
Sbjct: 156 GMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 946 IAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
+APE + + DV++FGVL+ E+ +PG
Sbjct: 213 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 19 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L N A SK + + +A+ ++
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG--TCGYIAP 948
Y++ + F +HRD++++ ++ ++ + DFG + + G +++P
Sbjct: 138 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 949 ELAYTMRANEKCDVFNFGVLVLEV 972
E DV++FGV++ E+
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 28 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L N A SK + + +A+ ++
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG--TCGYIAP 948
Y++ + F +HRD++++ ++ ++ + DFG + + G +++P
Sbjct: 147 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 949 ELAYTMRANEKCDVFNFGVLVLEV 972
E DV++FGV++ E+
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G G V++ + G+ AVK S E ++ + + +RH NI+ F +
Sbjct: 13 GKGRFGEVWRGKW-RGEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILGFIAADNK 69
Query: 845 TQ----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCF--- 897
L+LV +Y E GSL L+ E + + A+ L+++H +
Sbjct: 70 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEIVGTQ 125
Query: 898 --PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS------ELAGTCGYIAPE 949
P I HRD+ SK +L+ ++D G A ++ DS+ + GT Y+APE
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 950 L---AYTMRANE---KCDVFNFGVLVLEV 972
+ + M+ E + D++ G++ E+
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G G V++ + G+ AVK S E ++ + + +RH NI+ F +
Sbjct: 12 GKGRFGEVWRGKW-RGEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILGFIAADNK 68
Query: 845 TQ----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCF--- 897
L+LV +Y E GSL L+ E + + A+ L+++H +
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEIVGTQ 124
Query: 898 --PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS------ELAGTCGYIAPE 949
P I HRD+ SK +L+ ++D G A ++ DS+ + GT Y+APE
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 950 L---AYTMRANE---KCDVFNFGVLVLEV 972
+ + M+ E + D++ G++ E+
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 221 GSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSS 280
S+P AG + + L+L+ N+++ P S L YL L+ NQL F L+
Sbjct: 32 ASVP--AGIPTTTQVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTK 89
Query: 281 LKHLHVHNINKLSGSIPKEI-GNLKSLSHLWL 311
L HL +H IN+L SIP + NLKSL+H++L
Sbjct: 90 LTHLALH-INQLK-SIPMGVFDNLKSLTHIYL 119
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 37 FGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELT 96
++P I +++ HL NQ + + P LT L L L+VNQL L +LT
Sbjct: 31 LASVPAGIPTTTQVLHLYI--NQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLT 88
Query: 97 SLNELALSYNRLNGSIP 113
L LAL N+L SIP
Sbjct: 89 KLTHLALHINQLK-SIP 104
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 194 RIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGS 253
R + S+P+ I + +L +N Q++ P +L+ L +L L N+L+
Sbjct: 29 RSLASVPAGIPTTTQVLHLYIN--QITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDK 86
Query: 254 FKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHN 288
L +L L NQL F NL SL H+++ N
Sbjct: 87 LTKLTHLALHINQLKSIPMGVFDNLKSLTHIYLFN 121
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 320 IPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLK 379
+P + + + LYI N + P L L+ L+L+VN+L L+ L
Sbjct: 34 VPAGIPTTTQVLHLYI--NQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLT 91
Query: 380 FFALRENELSGSIPQEI-ENMKKLNKYLLFENQF 412
AL N+L SIP + +N+K L LF N +
Sbjct: 92 HLALHINQLK-SIPMGVFDNLKSLTHIYLFNNPW 124
Score = 33.1 bits (74), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 175 IPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLK 234
+P + + +Y+N +I P +L L+YL L NQL+ L+ L
Sbjct: 34 VPAGIPTTTQVLHLYIN--QITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLT 91
Query: 235 FLYLHDNRLSGYIPPKLGSFKSLLYLYLSHN 265
L LH N+L + KSL ++YL +N
Sbjct: 92 HLALHINQLKSIPMGVFDNLKSLTHIYLFNN 122
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEIC 637
N+++KL P L +L +LNL+ NQ + KL +L+ L L N L +IP +
Sbjct: 50 NQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLTHLALHINQL-KSIPMGVF 108
Query: 638 -NLESLEYMNLLQN 650
NL+SL ++ L N
Sbjct: 109 DNLKSLTHIYLFNN 122
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 247 IPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSL 306
+P + + +L+LY+ NQ+ P F +L+ L +L++ +N+L+ L L
Sbjct: 34 VPAGIPTTTQVLHLYI--NQITKLEPGVFDSLTQLTYLNLA-VNQLTALPVGVFDKLTKL 90
Query: 307 SHLWLSKTQLSGFIPPSLGNLSNIRGLYIREN 338
+HL L QL NL ++ +Y+ N
Sbjct: 91 THLALHINQLKSIPMGVFDNLKSLTHIYLFNN 122
Score = 30.0 bits (66), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLI 88
L L +NQ+ P L++L +L+ + NQ + + LT L L L +NQL +
Sbjct: 45 LHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLTHLALHINQLKSIP 104
Query: 89 PEELGELTSLNELAL 103
L SL + L
Sbjct: 105 MGVFDNLKSLTHIYL 119
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH 844
G G G V++ + G+ AVK S E ++ + + +RH NI+ F +
Sbjct: 15 GKGRFGEVWRGKW-RGEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILGFIAADNK 71
Query: 845 TQ----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCF--- 897
L+LV +Y E GSL L+ E + + A+ L+++H +
Sbjct: 72 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEIVGTQ 127
Query: 898 --PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS------ELAGTCGYIAPE 949
P I HRD+ SK +L+ ++D G A ++ DS+ + GT Y+APE
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 950 L---AYTMRANE---KCDVFNFGVLVLEV 972
+ + M+ E + D++ G++ E+
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILSNEAT------AAELDWSKRVNVIK------- 883
G C+ L ++ E+ + G+L+T L ++ A D K ++
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 884 GVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELA 940
VA + ++ C +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 156 QVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
++APE + + DV++FGVL+ E+ +PG
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 33/219 (15%)
Query: 179 LGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLS--GSIPPTAGNLSNLKFL 236
L LK LTF +N+ G+ SE+ +L SL +L L++N LS G + ++LK+L
Sbjct: 324 LKSLKRLTFT---SNK-GGNAFSEV-DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYL 378
Query: 237 YLHDNRLSGYIPPKLG------------------------SFKSLLYLYLSHNQLNGSLP 272
L N + LG S ++L+YL +SH +
Sbjct: 379 DLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 438
Query: 273 SSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRG 332
F LSSL+ L + + +P L++L+ L LS+ QL P + +LS+++
Sbjct: 439 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498
Query: 333 LYIRENMLYGSIPEEL-GRLKSLSQLSLSVNKLNGSIPH 370
L + N L S+P+ + RL SL ++ L N + S P
Sbjct: 499 LNMASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%)
Query: 40 IPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLN 99
+P + L L LD S Q + P L++L VL ++ NQL + LTSL
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQ 521
Query: 100 ELALSYNRLNGSIP 113
++ L N + S P
Sbjct: 522 KIWLHTNPWDCSCP 535
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 591 LRKLHHLNLSNNQFSQEISIQI-GKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQ 649
L L L ++ N F + I +L L+ LDLS L P+ +L SL+ +N+
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503
Query: 650 NKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682
N+L F R+ L I + N S P
Sbjct: 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536
Score = 29.6 bits (65), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 612 IGKLVQLSKLDLSHNSLGG-NIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGL 666
IG L L +L+++HN + +P NL +LE+++L NK+ + R +H +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 821 KGFVSEIT---EIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK 877
K F E+ + RH N+V F G C HL ++ + +L +++ + LD +K
Sbjct: 74 KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIV--LDVNK 131
Query: 878 RVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFG 924
+ + + + Y+H ILH+D+ SK V D K ++DFG
Sbjct: 132 TRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFG 174
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 25 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L N A SK + + +A+ ++
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT----CGYI 946
Y++ + F +HRD++++ ++ ++ + DFG + + +++ G ++
Sbjct: 144 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWM 198
Query: 947 APELAYTMRANEKCDVFNFGVLVLEV 972
+PE DV++FGV++ E+
Sbjct: 199 SPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 21 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L N A SK + + +A+ ++
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT----CGYI 946
Y++ + F +HRD++++ ++ ++ + DFG + + +++ G ++
Sbjct: 140 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWM 194
Query: 947 APELAYTMRANEKCDVFNFGVLVLEV 972
+PE DV++FGV++ E+
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 27 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L N A SK + + +A+ ++
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT----CGYI 946
Y++ + F +HRD++++ ++ ++ + DFG + + +++ G ++
Sbjct: 146 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWM 200
Query: 947 APELAYTMRANEKCDVFNFGVLVLEV 972
+PE DV++FGV++ E+
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 27 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L N A SK + + +A+ ++
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT----CGYI 946
Y++ + F +HRD++++ ++ ++ + DFG + + +++ G ++
Sbjct: 146 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWM 200
Query: 947 APELAYTMRANEKCDVFNFGVLVLEV 972
+PE DV++FGV++ E+
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 34 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L N A SK + + +A+ ++
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT----CGYI 946
Y++ + F +HRD++++ ++ ++ + DFG + + +++ G ++
Sbjct: 153 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWM 207
Query: 947 APELAYTMRANEKCDVFNFGVLVLEV 972
+PE DV++FGV++ E+
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 28 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L N A SK + + +A+ ++
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT----CGYI 946
Y++ + F +HRD++++ ++ ++ + DFG + + +++ G ++
Sbjct: 147 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWM 201
Query: 947 APELAYTMRANEKCDVFNFGVLVLEV 972
+PE DV++FGV++ E+
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 33/221 (14%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 36 GRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC 896
G C+ L ++ E+ + G+L+T L ++ ++ ++ K + L+ H C
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN----EFVPYKDLYK---DFLTLEHLIC 148
Query: 897 FP-------------PILHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELAG 941
+ +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 942 TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
++APE + + DV++FGVL+ E+ +PG
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 56 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L N A SK + + +A+ ++
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT----CGYI 946
Y++ + F +HRD++++ ++ ++ + DFG + + +++ G ++
Sbjct: 175 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWM 229
Query: 947 APELAYTMRANEKCDVFNFGVLVLEV 972
+PE DV++FGV++ E+
Sbjct: 230 SPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT Y+AP + + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPAIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILSNEAT------AAELDWSKRVNVIK------- 883
G C+ L ++ E+ + G+L+T L ++ A D K ++
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 884 GVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELA 940
VA + ++ C +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 156 QVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
++APE + + DV++FGVL+ E+ +PG
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+RH NIV+F HL +V EY G L + N A + + + + +
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGV 127
Query: 890 SYMHHDCFPPILHRDISSKKVLLD--LEYKAHVSDFGTAK----FLKPDSSNWSELAGTC 943
SY H + HRD+ + LLD + + DFG +K +P S+ GT
Sbjct: 128 SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTP 179
Query: 944 GYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGKHP 978
YIAPE+ + K DV++ GV + ++ G +P
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 27/228 (11%)
Query: 761 EGQNDVNNQELLS--ASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLHSL-- 811
+G + NQ LL T K+ + G+G GTVYK + A+K+L
Sbjct: 23 QGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 82
Query: 812 PTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNE 867
P I + +V + + + ++ + G C T + L+ + + G L + N
Sbjct: 83 PKANKEILDEAYV--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNI 139
Query: 868 ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
+ L+W ++ A ++Y+ ++HRD++++ VL+ ++DFG AK
Sbjct: 140 GSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 190
Query: 928 FLKPDSSNWSELAGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
L + + G ++A E + DV+++GV V E++
Sbjct: 191 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 238
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILSNEAT------AAELDWSKRVNVIK------- 883
G C+ L ++ E+ + G+L+T L ++ A D K ++
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 884 GVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELA 940
VA + ++ C +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 147 QVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
++APE + + DV++FGVL+ E+ +PG
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILSNEAT------AAELDWSKRVNVIK------- 883
G C+ L ++ E+ + G+L+T L ++ A D K ++
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 884 GVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELA 940
VA + ++ C +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 147 QVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
++APE + + DV++FGVL+ E+ +PG
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 38 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILSNEATA------AELDWSKRVNVIK------- 883
G C+ L ++ E+ + G+L+T L ++ A D K ++
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSF 157
Query: 884 GVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELA 940
VA + ++ C +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 158 QVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
++APE + + DV++FGVL+ E+ +PG
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 831 RHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALS 890
+H NI+ +++++V E + G L + + +E + S V+ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASA---VLFTITKTVE 130
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEY----KAHVSDFGTAKFLKPDSSNWSELAGTCGYI 946
Y+H ++HRD+ +L E + DFG AK L+ ++ T ++
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFV 187
Query: 947 APELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
APE+ + CD+++ GVL+ + G P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 790 GTVYKAEL---TSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFCS 843
G VYK L G+ + +L G ++ F E ++H N+V G +
Sbjct: 40 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99
Query: 844 HTQHLFLVYEYLERGSLATIL-------------SNEATAAELDWSKRVNVIKGVANALS 890
Q L +++ Y G L L + + L+ V+++ +A +
Sbjct: 100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 159
Query: 891 YM--HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTC----G 944
Y+ HH ++H+D++++ VL+ + +SD G F + ++++ +L G
Sbjct: 160 YLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLGNSLLPIR 212
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEV 972
++APE + + D++++GV++ EV
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 790 GTVYKAEL---TSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYGFCS 843
G VYK L G+ + +L G ++ F E ++H N+V G +
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 82
Query: 844 HTQHLFLVYEYLERGSLATIL-------------SNEATAAELDWSKRVNVIKGVANALS 890
Q L +++ Y G L L + + L+ V+++ +A +
Sbjct: 83 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 142
Query: 891 YM--HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTC----G 944
Y+ HH ++H+D++++ VL+ + +SD G F + ++++ +L G
Sbjct: 143 YLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLGNSLLPIR 195
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEV 972
++APE + + D++++GV++ EV
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 38/234 (16%)
Query: 760 QEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAEL-TSGDTRAVKKLHSLPTGEIGI 818
Q Q ++N+ E L G+M G+G CG V+K +G AVK++ +G
Sbjct: 18 QRYQAEINDLENL------GEM---GSGTCGQVWKMRFRKTGHVIAVKQMRR--SGNKEE 66
Query: 819 NQKGFVSEITEIRHRN---IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDW 875
N++ + ++ + IV+ +G +F+ E + G+ A L
Sbjct: 67 NKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGP---I 121
Query: 876 SKRV--NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS 933
+R+ + + AL Y+ ++HRD+ +LLD + + DFG + L D
Sbjct: 122 PERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179
Query: 934 SNWSELAGTCGYIAPELA---------YTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ AG Y+APE Y +RA DV++ G+ ++E+ G+ P
Sbjct: 180 AK-DRSAGCAAYMAPERIDPPDPTKPDYDIRA----DVWSLGISLVELATGQFP 228
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 182 LKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDN 241
L N+ ++ L N++ S + L +L+YL L NQL L+NLK L L +N
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 242 RLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEI- 300
+L +L YL L+HNQL F L++L L + + N+L S+P+ +
Sbjct: 120 QLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL-SYNQLQ-SLPEGVF 177
Query: 301 GNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLS 360
L L L L + QL L++++ +++ +N + P + LS
Sbjct: 178 DKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEW 230
Query: 361 VNKLNGSIPHCLGNLS 376
+NK +G + + G+++
Sbjct: 231 INKHSGVVRNSAGSVA 246
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
Query: 178 SLGGLKNLTFVYLNNNRIVGSIPSEI-GNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFL 236
+L L NLT++ L N++ S+P+ + L +L L L +NQL L+NL +L
Sbjct: 80 ALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 237 YLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSS-FGNLSSLKHLHVHNINKLSGS 295
L N+L +L L LS+NQL SLP F L+ LK L ++ N+L S
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQ-NQLK-S 195
Query: 296 IPKEI-GNLKSLSHLWL 311
+P + L SL ++WL
Sbjct: 196 VPDGVFDRLTSLQYIWL 212
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 230 LSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSS-FGNLSSLKHLHVHN 288
L N+++L L N+L L +L YL L+ NQL SLP+ F L++LK L V
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKEL-VLV 117
Query: 289 INKLSGSIPKEI-GNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEE 347
N+L S+P + L +L++L L+ QL L+N+ L + N L S+PE
Sbjct: 118 ENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEG 175
Query: 348 L-GRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIP 393
+ +L L L L N+L L++L++ L +N + P
Sbjct: 176 VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 588 LGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNL 647
L EL L +L L+ NQ + KL L +L L N L L +L Y+NL
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140
Query: 648 LQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682
N+L F ++ L+ +D+SYN+LQ S+P
Sbjct: 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPE 174
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNG 86
YL L+ NQL L+ LK L NQ + LTNL L L+ NQL
Sbjct: 88 TYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS 147
Query: 87 LIPEELGELTSLNELALSYNRLNGSIP 113
L +LT+L EL LSYN+L S+P
Sbjct: 148 LPKGVFDKLTNLTELDLSYNQLQ-SLP 173
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%)
Query: 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEIC 637
N+L L +L L +LNL++NQ KL L++LDLS+N L
Sbjct: 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFD 178
Query: 638 NLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIP 681
L L+ + L QN+L F R+ L I + N + P
Sbjct: 179 KLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 12/129 (9%)
Query: 286 VHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIP 345
+H+I+ L KE+ NL ++L L+ QL L+N++ L + EN L S+P
Sbjct: 75 LHDISAL-----KELTNL---TYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLP 125
Query: 346 EEL-GRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEI-ENMKKLN 403
+ + +L +L+ L+L+ N+L L+NL L N+L S+P+ + + + +L
Sbjct: 126 DGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLK 184
Query: 404 KYLLFENQF 412
L++NQ
Sbjct: 185 DLRLYQNQL 193
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 37/88 (42%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNG 86
YL+L+ NQL L+ L LD S NQ + LT L LRL NQL
Sbjct: 136 TYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195
Query: 87 LIPEELGELTSLNELALSYNRLNGSIPA 114
+ LTSL + L N + + P
Sbjct: 196 VPDGVFDRLTSLQYIWLHDNPWDCTCPG 223
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 34 NQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELG 93
NQL L+ L +L+ + NQ + LTNL L LS NQL L
Sbjct: 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFD 178
Query: 94 ELTSLNELALSYNRLNGSIP 113
+LT L +L L N+L S+P
Sbjct: 179 KLTQLKDLRLYQNQLK-SVP 197
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILSNEAT------AAELDWSKRVNVIK------- 883
G C+ L ++ E+ + G+L+T L ++ A D K ++
Sbjct: 87 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 884 GVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK--PDSSNWSELA 940
VA + ++ C +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 147 QVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
++APE + + DV++FGVL+ E+ +PG
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILSNEAT------AAELDWSKRVNVIK------- 883
G C+ L ++ E+ + G+L+T L ++ A D K ++
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 884 GVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL--KPDSSNWSELA 940
VA + ++ C +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 156 QVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
++APE + + DV++FGVL+ E+ +PG
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLH---------SLPTGEIGINQKGFVSEITEIRHRN 834
G G GTVYKA + SG A+K + LP + + + + H N
Sbjct: 18 GVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTV--REVALLRRLEAFEHPN 75
Query: 835 IVKFYGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+V+ C+ ++ + LV+E++++ L T L ++A L ++++ L
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLMRQFLRGL 133
Query: 890 SYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE 949
++H +C I+HRD+ + +L+ ++DFG A+ + + + T Y APE
Sbjct: 134 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LTPVVVTLWYRAPE 189
Query: 950 LAYTMRANEKCDVFNFGVLVLEVIEGK 976
+ D+++ G + E+ K
Sbjct: 190 VLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 14/239 (5%)
Query: 190 LNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPP 249
L NN+I + NL++L L L N++S P L L+ LYL N+L +P
Sbjct: 59 LQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPE 117
Query: 250 KLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHV-HNINKLSGSIPKEIGNLKSLSH 308
K+ K+L L + N++ S F L+ + + + N K SG +K LS+
Sbjct: 118 KMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSY 175
Query: 309 LWLSKTQLSGF---IPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLN 365
+ ++ T ++ +PPSL L++ N + L L +L++L LS N ++
Sbjct: 176 IRIADTNITTIPQGLPPSLTE------LHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 229
Query: 366 GSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSG 424
L N +L+ L N+L +P + + K + L N + + C G
Sbjct: 230 AVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 287
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 18/245 (7%)
Query: 151 IPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLS 210
+P+DL + L N + + LKNL + L NN+I P L L
Sbjct: 46 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103
Query: 211 YLGLNKNQLS---GSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQL 267
L L+KNQL +P T L+ L +H+N ++ ++ + L N L
Sbjct: 104 RLYLSKNQLKELPEKMPKT------LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 157
Query: 268 --NGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLG 325
+G +F + L ++ + + N +IP+ G SL+ L L +++ SL
Sbjct: 158 KSSGIENGAFQGMKKLSYIRIADTN--ITTIPQ--GLPPSLTELHLDGNKITKVDAASLK 213
Query: 326 NLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRE 385
L+N+ L + N + L L +L L+ NKL +P L + ++ L
Sbjct: 214 GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHN 272
Query: 386 NELSG 390
N +S
Sbjct: 273 NNISA 277
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEIC 637
N+++++ + L+ LH L L NN+ S+ LV+L +L LS N L +P ++
Sbjct: 62 NKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KELPEKMP 120
Query: 638 NLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQNATIEAFQGN 697
++L+ + + +N+++ S F ++ + +++ N L+ S +N AFQG
Sbjct: 121 --KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS-----GIENG---AFQGM 170
Query: 698 KEL 700
K+L
Sbjct: 171 KKL 173
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 472 PDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNR 531
PD LLDL NN ++ L TL + N+IS P + +L +L S N+
Sbjct: 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111
Query: 532 L 532
L
Sbjct: 112 L 112
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILSNEAT------AAELDWSKRVNVIK------- 883
G C+ L ++ E+ + G+L+T L ++ A D K ++
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 884 GVANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK--PDSSNWSELA 940
VA + ++ C +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 147 QVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
++APE + + DV++FGVL+ E+ +PG
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 16/254 (6%)
Query: 175 IPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLK 234
+P+ L + + L NN+I + NL++L L L N++S P L L+
Sbjct: 46 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103
Query: 235 FLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHV-HNINKLS 293
LYL N+L +P K+ K+L L + N++ S F L+ + + + N K S
Sbjct: 104 RLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS 160
Query: 294 GSIPKEIGNLKSLSHLWLSKTQLSGF---IPPSLGNLSNIRGLYIRENMLYGSIPEELGR 350
G +K LS++ ++ T ++ +PPSL L++ N + L
Sbjct: 161 GIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTE------LHLDGNKITKVDAASLKG 214
Query: 351 LKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFEN 410
L +L++L LS N ++ L N +L+ L N+L +P + + K + L N
Sbjct: 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNN 273
Query: 411 QFTGYLPQNVCQSG 424
+ + C G
Sbjct: 274 NISAIGSNDFCPPG 287
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 18/245 (7%)
Query: 151 IPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLS 210
+P+DL + L N + + LKNL + L NN+I P L L
Sbjct: 46 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103
Query: 211 YLGLNKNQLS---GSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQL 267
L L+KNQL +P T L+ L +H+N ++ ++ + L N L
Sbjct: 104 RLYLSKNQLKELPEKMPKT------LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 157
Query: 268 --NGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLG 325
+G +F + L ++ + + N +IP+ G SL+ L L +++ SL
Sbjct: 158 KSSGIENGAFQGMKKLSYIRIADTN--ITTIPQ--GLPPSLTELHLDGNKITKVDAASLK 213
Query: 326 NLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRE 385
L+N+ L + N + L L +L L+ NKL +P L + ++ L
Sbjct: 214 GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHN 272
Query: 386 NELSG 390
N +S
Sbjct: 273 NNISA 277
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEIC 637
N+++++ + L+ LH L L NN+ S+ LV+L +L LS N L +P ++
Sbjct: 62 NKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KELPEKMP 120
Query: 638 NLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQ 687
++L+ + + +N+++ S F ++ + +++ N L+ S + AFQ
Sbjct: 121 --KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 168
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 472 PDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNR 531
PD LLDL NN ++ L TL + N+IS P + +L +L S N+
Sbjct: 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111
Query: 532 L 532
L
Sbjct: 112 L 112
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 38 GRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILS---NEATAAE--------LDWSKRVNVIKGV 885
G C+ L ++ E+ + G+L+T L NE + L + V
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQV 157
Query: 886 ANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK--PDSSNWSELAGTC 943
A + ++ +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 158 AKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 944 GYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
++APE + + DV++FGVL+ E+ +PG
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + ++ H N++ + + + L+ E + G L L+ + + +E + + IK
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIK 122
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEYK-AHVS--DFGTAKFLKPDSSNWSEL 939
+ + ++Y+H I H D+ + + LLD H+ DFG A ++ D + +
Sbjct: 123 QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI 178
Query: 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + ++ H N++ + + + L+ E + G L L+ + + +E + + IK
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIK 122
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEYK-AHVS--DFGTAKFLKPDSSNWSEL 939
+ + ++Y+H I H D+ + + LLD H+ DFG A ++ D + +
Sbjct: 123 QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI 178
Query: 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 24/206 (11%)
Query: 785 GTGGCGTVYKAELTSG------DTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK 837
G G G VY+ + G +TR A+K ++ + I S + E ++V+
Sbjct: 21 GQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 838 FYGFCSHTQHLFLVYEYLERGSLATIL-------SNEATAAELDWSKRVNVIKGVANALS 890
G S Q ++ E + RG L + L N A SK + + +A+ ++
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT----CGYI 946
Y++ + F +HRD++++ + ++ + DFG + + +++ G ++
Sbjct: 140 YLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWM 194
Query: 947 APELAYTMRANEKCDVFNFGVLVLEV 972
+PE DV++FGV++ E+
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + ++ H N++ + + + L+ E + G L L+ + + +E + + IK
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIK 122
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEYK-AHVS--DFGTAKFLKPDSSNWSEL 939
+ + ++Y+H I H D+ + + LLD H+ DFG A ++ D + +
Sbjct: 123 QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI 178
Query: 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + ++ H N++ + + + L+ E + G L L+ + + +E + + IK
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIK 122
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEYK-AHVS--DFGTAKFLKPDSSNWSEL 939
+ + ++Y+H I H D+ + + LLD H+ DFG A ++ D + +
Sbjct: 123 QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI 178
Query: 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
+++RD+ + +L+D + V+DFG AK +K W L GT +APE+ + N+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEALAPEIILSKGYNKA 218
Query: 960 CDVFNFGVLVLEVIEGKHP 978
D + GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 64 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 120
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 121 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 175
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVK--KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKF 838
G+G V K + +G A K K L + G++++ E+ EIRH NI+
Sbjct: 21 GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITL 80
Query: 839 YGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFP 898
+ + + L+ E + G L L+ + + E + +K + + + Y+H
Sbjct: 81 HDIFENKTDVVLILELVSGGELFDFLAEKESLTE---DEATQFLKQILDGVHYLHSK--- 134
Query: 899 PILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
I H D+ + + LLD + + DFG A ++ + + + GT ++APE+
Sbjct: 135 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYE 193
Query: 955 RANEKCDVFNFGVLVLEVIEGKHP 978
+ D+++ GV+ ++ G P
Sbjct: 194 PLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + ++ H N++ + + + L+ E + G L L+ + + +E + + IK
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIK 122
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEYK-AHVS--DFGTAKFLKPDSSNWSEL 939
+ + ++Y+H I H D+ + + LLD H+ DFG A ++ D + +
Sbjct: 123 QILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI 178
Query: 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 64 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 120
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 121 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 175
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVK--KLHSLPTGEIGINQKGFVSEIT---EIRHRNIVKF 838
G+G V K + +G A K K L + G++++ E+ EIRH NI+
Sbjct: 14 GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITL 73
Query: 839 YGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFP 898
+ + + L+ E + G L L+ + + E + +K + + + Y+H
Sbjct: 74 HDIFENKTDVVLILELVSGGELFDFLAEKESLTE---DEATQFLKQILDGVHYLHSK--- 127
Query: 899 PILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
I H D+ + + LLD + + DFG A ++ + + + GT ++APE+
Sbjct: 128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYE 186
Query: 955 RANEKCDVFNFGVLVLEVIEGKHP 978
+ D+++ GV+ ++ G P
Sbjct: 187 PLGLEADMWSIGVITYILLSGASP 210
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 27 GSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N A+L +I + L Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 198
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 199 TVDIWSVGCIMAELLTGR 216
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 30/221 (13%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKK---LHSLPTGEIGINQKGFVSEITEI----RHRNIVK 837
G G G V +A+ D A + + L G + +SE+ + H N+V
Sbjct: 37 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 96
Query: 838 FYGFCSHTQH-LFLVYEYLERGSLATILSNE-------ATAAEL--DWSKRVNVIK---G 884
G C+ L ++ E+ + G+L+T L ++ T +L D+ ++I
Sbjct: 97 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQ 156
Query: 885 VANALSYM-HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL--KPDSSNWSELAG 941
VA + ++ C +HRD++++ +LL + + DFG A+ + PD +
Sbjct: 157 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 942 TCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GKHPG 979
++APE + + DV++FGVL+ E+ +PG
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 221 GSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSS 280
S+P G + + LYL+DNR++ P L L L +NQL F L+
Sbjct: 22 ASVP--TGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 79
Query: 281 LKHLHVHNINKLSGSIPK-EIGNLKSLSHLWL 311
L L + N N+L SIP+ NL+SL+H+WL
Sbjct: 80 LTQLSL-NDNQLK-SIPRGAFDNLRSLTHIWL 109
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEIC 637
NR++KL P L +L L+L NNQ + + KL QL++L L+ N L
Sbjct: 40 NRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFD 99
Query: 638 NLESLEYMNLLQN 650
NL SL ++ LL N
Sbjct: 100 NLRSLTHIWLLNN 112
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 188 VYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYI 247
+YL +NRI P L L+ L L+ NQL+ L+ L L L+DN+L
Sbjct: 35 LYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 94
Query: 248 PPKLGSFKSLLYLYLSHN 265
+ +SL +++L +N
Sbjct: 95 RGAFDNLRSLTHIWLLNN 112
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 333 LYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSI 392
LY+ +N + P RL L++L L N+L L+ L +L +N+L SI
Sbjct: 35 LYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK-SI 93
Query: 393 PQ-EIENMKKLNKYLLFENQF 412
P+ +N++ L L N +
Sbjct: 94 PRGAFDNLRSLTHIWLLNNPW 114
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 166 LHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPP 225
L+ N + + P L LT + L+NN++ L L+ L LN NQL SIP
Sbjct: 37 LYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK-SIPR 95
Query: 226 TA-GNLSNLKFLYLHDN 241
A NL +L ++L +N
Sbjct: 96 GAFDNLRSLTHIWLLNN 112
Score = 29.6 bits (65), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 196 VGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFK 255
+ S+P+ I + YL N+++ P L+ L L L +N+L+
Sbjct: 21 LASVPTGIPTTTQVLYL--YDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 78
Query: 256 SLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHN 288
L L L+ NQL +F NL SL H+ + N
Sbjct: 79 QLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLN 111
Score = 29.6 bits (65), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 37 FGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELT 96
++PT I +++ +L N+ + + P LT L L L NQL L +LT
Sbjct: 21 LASVPTGIPTTTQVLYL--YDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 78
Query: 97 SLNELALSYNRLNGSIP 113
L +L+L+ N+L SIP
Sbjct: 79 QLTQLSLNDNQLK-SIP 94
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 30/234 (12%)
Query: 762 GQNDVNNQELL---SASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SL 811
G + NQ LL + F+ VL G+G GTVYK + A+K+L +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 812 PTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNE 867
P I + +V + + + ++ + G C T + L+ + + G L + N
Sbjct: 60 PKANKEILDEAYV--MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNI 116
Query: 868 ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
+ L+W ++ A ++Y+ ++HRD++++ VL+ ++DFG AK
Sbjct: 117 GSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 928 FLKPDSSNWSELAGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
L + + G ++A E + DV+++GV V E++ G P
Sbjct: 168 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 30/234 (12%)
Query: 762 GQNDVNNQELL---SASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SL 811
G + NQ LL + F+ VL G+G GTVYK + A+K+L +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 812 PTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNE 867
P I + +V + + + ++ + G C T + L+ + + G L + N
Sbjct: 60 PKANKEILDEAYV--MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNI 116
Query: 868 ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
+ L+W ++ A ++Y+ ++HRD++++ VL+ ++DFG AK
Sbjct: 117 GSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 928 FLKPDSSNWSELAGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
L + + G ++A E + DV+++GV V E++ G P
Sbjct: 168 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V+ + EIRH NI+ + + + L+ E + G L L+ + + E + +K
Sbjct: 80 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---DEATQFLK 136
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSNWSEL 939
+ + + Y+H I H D+ + + LLD + + DFG A ++ + + +
Sbjct: 137 QILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GNEFKNI 192
Query: 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 193 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 30/234 (12%)
Query: 762 GQNDVNNQELL---SASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SL 811
G + NQ LL + F+ VL G+G GTVYK + A+K+L +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 812 PTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNE 867
P I + +V + + + ++ + G C T + L+ + + G L + N
Sbjct: 60 PKANKEILDEAYV--MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNI 116
Query: 868 ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
+ L+W ++ A ++Y+ ++HRD++++ VL+ ++DFG AK
Sbjct: 117 GSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 167
Query: 928 FLKPDSSNWSELAGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
L + + G ++A E + DV+++GV V E++ G P
Sbjct: 168 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 37/231 (16%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ + E+
Sbjct: 11 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ 65
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+ AT+ +
Sbjct: 66 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP----ATVYRVARHYS 113
Query: 872 ELDWSKRVNVIK----GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTA 926
+ V +K + +L+Y+H I HRDI + +LLD + + DFG+A
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
Query: 927 KFLKPDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
K L N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 171 KQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 34/167 (20%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK------FLKPDSSNWSE 938
VA + Y+ F +HRD++++ +LD + V+DFG A+ + +
Sbjct: 133 VARGMEYLAEQKF---VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIV 998
L + A E T R K DV++FGVL+ E++ P + +I
Sbjct: 190 LP--VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY--------------RHID 233
Query: 999 VNDLID-----SRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQ 1040
DL RLP P E S+ V C +A+P RPT +
Sbjct: 234 PFDLTHFLAQGRRLPQP----EYCPDSLYQVMQQCWEADPAVRPTFR 276
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 30/234 (12%)
Query: 762 GQNDVNNQELL---SASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SL 811
G + NQ LL + F+ VL G+G GTVYK + A+K+L +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 812 PTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNE 867
P I + +V + + + ++ + G C T + L+ + + G L + N
Sbjct: 60 PKANKEILDEAYV--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNI 116
Query: 868 ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
+ L+W ++ A ++Y+ ++HRD++++ VL+ ++DFG AK
Sbjct: 117 GSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 928 FLKPDSSNWSELAGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
L + + G ++A E + DV+++GV V E++ G P
Sbjct: 168 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 30/234 (12%)
Query: 762 GQNDVNNQELL---SASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SL 811
G + NQ LL + F+ VL G+G GTVYK + A+K+L +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 812 PTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNE 867
P I + +V + + + ++ + G C T + L+ + + G L + N
Sbjct: 60 PKANKEILDEAYV--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNI 116
Query: 868 ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927
+ L+W ++ A ++Y+ ++HRD++++ VL+ ++DFG AK
Sbjct: 117 GSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 167
Query: 928 FLKPDSSNWSELAGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
L + + G ++A E + DV+++GV V E++ G P
Sbjct: 168 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + EI+H N++ + + + L+ E + G L L+ + + E + +K
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE---EEATEFLK 121
Query: 884 GVANALSYMHHDCFPPILHRDISSKKV-LLDLEY---KAHVSDFGTAKFLKPDSSN-WSE 938
+ N + Y+H I H D+ + + LLD + + DFG A K D N +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 221 GSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSS 280
S+P G + + LYL+DN+++ P L L L +NQL F L+
Sbjct: 30 ASVP--TGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 87
Query: 281 LKHLHVHNINKLSGSIPK-EIGNLKSLSHLWL 311
L L + N N+L SIP+ NLKSL+H+WL
Sbjct: 88 LTQLSL-NDNQLK-SIPRGAFDNLKSLTHIWL 117
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEIC 637
N+++KL P L +L L+L NNQ + + KL QL++L L+ N L
Sbjct: 48 NQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFD 107
Query: 638 NLESLEYMNLLQN 650
NL+SL ++ LL N
Sbjct: 108 NLKSLTHIWLLNN 120
Score = 33.1 bits (74), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 188 VYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYI 247
+YL +N+I P L L+ L L+ NQL+ L+ L L L+DN+L
Sbjct: 43 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 102
Query: 248 PPKLGSFKSLLYLYLSHN 265
+ KSL +++L +N
Sbjct: 103 RGAFDNLKSLTHIWLLNN 120
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 333 LYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSI 392
LY+ +N + P RL L++L L N+L L+ L +L +N+L SI
Sbjct: 43 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK-SI 101
Query: 393 PQ-EIENMKKLNKYLLFENQF 412
P+ +N+K L L N +
Sbjct: 102 PRGAFDNLKSLTHIWLLNNPW 122
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 196 VGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFK 255
+ S+P+ I + YL NQ++ P L+ L L L +N+L+
Sbjct: 29 LASVPTGIPTTTQVLYL--YDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 86
Query: 256 SLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHN 288
L L L+ NQL +F NL SL H+ + N
Sbjct: 87 QLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLN 119
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 37 FGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELT 96
++PT I +++ +L NQ + + P LT L L L NQL L +LT
Sbjct: 29 LASVPTGIPTTTQVLYL--YDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 86
Query: 97 SLNELALSYNRLNGSIP 113
L +L+L+ N+L SIP
Sbjct: 87 QLTQLSLNDNQLK-SIP 102
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 166 LHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPP 225
L+ N + + P L LT + L+NN++ L L+ L LN NQL SIP
Sbjct: 45 LYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK-SIPR 103
Query: 226 TA-GNLSNLKFLYLHDN 241
A NL +L ++L +N
Sbjct: 104 GAFDNLKSLTHIWLLNN 120
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 44/243 (18%)
Query: 759 SQEGQNDVNNQELLSASTFEGKMVLHGTGGCGT-VYKAELTSGDTRAVKKLHSLPTG-EI 816
Q+ ++ + ++ +F K VL G G GT VY+ + D AVK++ LP
Sbjct: 8 EQDDGDEETSVVIVGKISFCPKDVL-GHGAEGTIVYRGMFDNRDV-AVKRI--LPECFSF 63
Query: 817 GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWS 876
+ + E E H N++++ FC+ F +Y+ A L + + D++
Sbjct: 64 ADREVQLLRESDE--HPNVIRY--FCTEKDRQF---QYIAIELCAATL--QEYVEQKDFA 114
Query: 877 ----KRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL-----EYKAHVSDFGTAK 927
+ + +++ + L+++H I+HRD+ +L+ + + KA +SDFG K
Sbjct: 115 HLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
Query: 928 FL---KPDSSNWSELAGTCGYIAPELAYTMRANEKC--------DVFNFGVLVLEVI-EG 975
L + S S + GT G+IAPE+ +E C D+F+ G + VI EG
Sbjct: 172 KLAVGRHSFSRRSGVPGTEGWIAPEM-----LSEDCKENPTYTVDIFSAGCVFYYVISEG 226
Query: 976 KHP 978
HP
Sbjct: 227 SHP 229
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 43/206 (20%)
Query: 45 SHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGL--IPEELGELTSLNELA 102
S +S HLDFS N + + G LT L L L +NQL L I E ++ SL +L
Sbjct: 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380
Query: 103 LSYNRLNGSIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLISPHYGSIPQDLGNLESPV 162
+S N S Y D +S +
Sbjct: 381 ISQN--------------------------------------SVSYDEKKGDCSWTKSLL 402
Query: 163 SVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGS 222
S+++ +N + I R L + + L++N+I SIP ++ L +L L + NQL
Sbjct: 403 SLNMSSNILTDTIFRCLPP--RIKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQLKSV 459
Query: 223 IPPTAGNLSNLKFLYLHDNRLSGYIP 248
L++L+ ++LH N P
Sbjct: 460 PDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 209/511 (40%), Gaps = 68/511 (13%)
Query: 199 IPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSF-KSL 257
+P ++ + + L +++N +S +LS L+ L + NR+ Y+ + F + L
Sbjct: 15 VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQ-YLDISVFKFNQEL 71
Query: 258 LYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSG-SIPKEIGNLKSLSHLWLSKTQL 316
YL LSHN+L + S +LKHL + + N I KE GN+ L L LS T L
Sbjct: 72 EYLDLSHNKL---VKISCHPTVNLKHLDL-SFNAFDALPICKEFGNMSQLKFLGLSTTHL 127
Query: 317 --SGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLS-QLSLSVNK-----LNGSI 368
S +P + N+S + L + E PE L + S + NK L+ S+
Sbjct: 128 EKSSVLPIAHLNISKVL-LVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSV 186
Query: 369 PHCLG-NLSNLKFFALRENELSG--SIPQEIENMKKLNKYLL--FENQFTGYLP-QNVCQ 422
LSN+K L +N+ S SI +++ KL+ L E + ++ +
Sbjct: 187 KTVANLELSNIKC-VLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVW 245
Query: 423 SGSLTHFSVRNNNFVGPIP-RSLQ-NCTSLYSLRLERNQLTGNISEVFG-----IYPDLE 475
++ +FS+ N G + R + TSL +L + + +S+VFG IY
Sbjct: 246 HTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQV-----VSDVFGFPQSYIYEIFS 300
Query: 476 LLDLSNNNFFGEISSNWIKCPQLAT----LNMGGNEISGTIPSEIGNMTQLHKLDFSSNR 531
+++ N G + + CP + L+ N ++ T+ G++T+L L N+
Sbjct: 301 NMNIKNFTVSGTRMVHML-CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQ 359
Query: 532 LVGQIPXXXXXXXXXXXXXXXXXXXXGDIPXXXXXXXXXXXXXXSANRLSKLIPK-NLGE 590
L I S N +S K +
Sbjct: 360 L----------------------KELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSW 397
Query: 591 LRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQN 650
+ L LN+S+N + I + +++ LDL N + IP ++ LE+L+ +N+ N
Sbjct: 398 TKSLLSLNMSSNILTDTIFRCLPPRIKV--LDLHSNKIKS-IPKQVVKLEALQELNVASN 454
Query: 651 KLSGPIPSCFRRMHGLSSIDVSYNELQGSIP 681
+L F R+ L I + N S P
Sbjct: 455 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 584 IPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLE 643
+PK+L + K LN+S N S+ + I L +L L +SHN + S + LE
Sbjct: 15 VPKDLSQ--KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELE 72
Query: 644 YMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQNATIEAFQG 696
Y++L NKL SC + L +D+S+N +P K F N + F G
Sbjct: 73 YLDLSHNKLVK--ISCHPTV-NLKHLDLSFNAFDA-LPICKEFGNMSQLKFLG 121
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 576 SANRLSKLIPKNLGELRKLHHLNLSNNQFSQ--EISIQIGKLVQLSKLDLSHNSLGGNIP 633
S N L+ + +N G L +L L L NQ + +I+ ++ L +LD+S NS+ +
Sbjct: 332 SNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEK 391
Query: 634 SEICNL-ESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQNATIE 692
C+ +SL +N+ N L+ I C + +D+ N+++ SIP Q +E
Sbjct: 392 KGDCSWTKSLLSLNMSSNILTDTIFRCLPP--RIKVLDLHSNKIK-SIPK----QVVKLE 444
Query: 693 AFQ 695
A Q
Sbjct: 445 ALQ 447
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 221 GSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSS 280
S+P G + + LYL+DN+++ P L L L +NQL F L+
Sbjct: 22 ASVP--TGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 79
Query: 281 LKHLHVHNINKLSGSIPK-EIGNLKSLSHLWL 311
L L + N N+L SIP+ NLKSL+H+WL
Sbjct: 80 LTQLSL-NDNQLK-SIPRGAFDNLKSLTHIWL 109
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEIC 637
N+++KL P L +L L+L NNQ + + KL QL++L L+ N L
Sbjct: 40 NQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFD 99
Query: 638 NLESLEYMNLLQN 650
NL+SL ++ LL N
Sbjct: 100 NLKSLTHIWLLNN 112
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 188 VYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYI 247
+YL +N+I P L L+ L L+ NQL+ L+ L L L+DN+L
Sbjct: 35 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 94
Query: 248 PPKLGSFKSLLYLYLSHN 265
+ KSL +++L +N
Sbjct: 95 RGAFDNLKSLTHIWLLNN 112
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 333 LYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSI 392
LY+ +N + P RL L++L L N+L L+ L +L +N+L SI
Sbjct: 35 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK-SI 93
Query: 393 PQ-EIENMKKLNKYLLFENQF 412
P+ +N+K L L N +
Sbjct: 94 PRGAFDNLKSLTHIWLLNNPW 114
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query: 194 RIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGS 253
+ + S+P+ I + YL NQ++ P L+ L L L +N+L+
Sbjct: 19 KSLASVPTGIPTTTQVLYL--YDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDK 76
Query: 254 FKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHN 288
L L L+ NQL +F NL SL H+ + N
Sbjct: 77 LTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLN 111
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 37 FGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELT 96
++PT I +++ +L NQ + + P LT L L L NQL L +LT
Sbjct: 21 LASVPTGIPTTTQVLYL--YDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 78
Query: 97 SLNELALSYNRLNGSIP 113
L +L+L+ N+L SIP
Sbjct: 79 QLTQLSLNDNQLK-SIP 94
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 166 LHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPP 225
L+ N + + P L LT + L+NN++ L L+ L LN NQL SIP
Sbjct: 37 LYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK-SIPR 95
Query: 226 TA-GNLSNLKFLYLHDN 241
A NL +L ++L +N
Sbjct: 96 GAFDNLKSLTHIWLLNN 112
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 51 GSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 222
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 223 TVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 50 GSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 164
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 221
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 222 TVDIWSVGCIMAELLTGR 239
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 42/297 (14%)
Query: 768 NQELLS--ASTFEGKMVLHGTGGCGTVYKA-ELTSGDTR----AVKKL--HSLPTGEIGI 818
NQ LL T K+ + G+G GTVYK + G+ A+K L ++ P I
Sbjct: 7 NQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEI 66
Query: 819 NQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLAT-ILSNEATAAELDWSK 877
+ +V + + + + G C T + LV + + G L + N D
Sbjct: 67 LDEAYV--MAGVGSPYVSRLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDL-- 121
Query: 878 RVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS 937
+N +A +SY+ ++HRD++++ VL+ ++DFG A+ L D + +
Sbjct: 122 -LNWCMQIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 177
Query: 938 ELAGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXN 994
G ++A E R + DV+++GV V E++ G P
Sbjct: 178 ADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE-------- 229
Query: 995 MNIVVNDLID--SRLP-PPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048
+ DL++ RLP PP+ ++ MI V C + +CRP +++ + R
Sbjct: 230 ----IPDLLEKGERLPQPPICTID---VYMIMVK--CWMIDSECRPRFRELVSEFSR 277
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 577 ANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQ-IGKLVQLSKLDLSHNSLGGNIPSE 635
AN +L N L L + N ++ + + KL L KLDLSH+ + S+
Sbjct: 309 ANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEKLENLQKLDLSHSDIEA---SD 365
Query: 636 ICNLE-----SLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQN 688
CNL+ L+Y+NL N+ G F+ L +DV++ L PHS FQN
Sbjct: 366 CCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHS-PFQN 422
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 9/259 (3%)
Query: 163 SVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGS 222
S++L + FS + + + + L + G +PS I + SL L LN N
Sbjct: 257 SINLQKHRFSDLSSSTFRCFTRVQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQL 315
Query: 223 IPPTAGNLSNLKFLYLHDNRLSGYIPPK-LGSFKSLLYLYLSHNQLNGSLPSSFGNLSSL 281
A + +L+ LY+ N + + L ++L L LSH+ + S + L +L
Sbjct: 316 CQINAASFPSLRDLYIKGNMRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNL-QLKNL 374
Query: 282 KHLHVHNI--NKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPS-LGNLSNIRGLYIREN 338
+HL N+ N+ G + L L ++ T L P S NL +R L +
Sbjct: 375 RHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHC 434
Query: 339 MLYGSIPEELGRLKSLSQLSLSVNKL-NGSI--PHCLGNLSNLKFFALRENELSGSIPQE 395
+L S L L+ L L+L N +GSI + L + +L+ L L Q
Sbjct: 435 LLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQA 494
Query: 396 IENMKKLNKYLLFENQFTG 414
++ +N L N TG
Sbjct: 495 FHGLRNVNHLDLSHNSLTG 513
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 30/117 (25%)
Query: 588 LGELRKLHHLNLSNNQFSQEISIQIGKLVQL----------------------------S 619
L L+ L HLNL N F Q+ SI L+Q+ +
Sbjct: 444 LAGLQDLRHLNLQGNSF-QDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVN 502
Query: 620 KLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNEL 676
LDLSHNSL G+ + +L+ L Y+N+ N + P + S I++S+N L
Sbjct: 503 HLDLSHNSLTGDSMDALSHLKGL-YLNMASNNIRIIPPHLLPALSQQSIINLSHNPL 558
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 37/256 (14%)
Query: 179 LGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLS--GSIPPTAGNLSNLKFL 236
L LK LTF +N+ G+ SE+ +L SL +L L++N LS G + ++LK+L
Sbjct: 324 LKSLKRLTFT---SNK-GGNAFSEV-DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYL 378
Query: 237 YLHDNRLSGYIPPKLG------------------------SFKSLLYLYLSHNQLNGSLP 272
L N + LG S ++L+YL +SH +
Sbjct: 379 DLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 438
Query: 273 SSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRG 332
F LSSL+ L + + +P L++L+ L LS+ QL P + +LS+++
Sbjct: 439 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498
Query: 333 LYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNL-SNLKFFALRENELS-- 389
L + N + L SL L S+N + S L + S+L F L +N+ +
Sbjct: 499 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 558
Query: 390 ---GSIPQEIENMKKL 402
S Q I++ ++L
Sbjct: 559 CEHQSFLQWIKDQRQL 574
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 612 IGKLVQLSKLDLSHNSLGG-NIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGL 666
IG L L +L+++HN + +P NL +LE+++L NK+ + R +H +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 41 GSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 98
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 155
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 212
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 213 TVDIWSVGCIMAELLTGR 230
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 164 VSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGN-LRSLSYLGLNKNQLSGS 222
+ L TN+ + L +LT +YL N++ S+P+ + N L SL+YL L+ NQL
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKL-QSLPNGVFNKLTSLTYLNLSTNQLQSL 91
Query: 223 IPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLK 282
L+ LK L L+ N+L L L L NQL F L+SL+
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ 151
Query: 283 HLHVHN 288
++ +H+
Sbjct: 152 YIWLHD 157
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 198 SIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSL 257
S+P+ I +YL L N L L++L LYL N+L SL
Sbjct: 21 SVPTGIP--AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL 78
Query: 258 LYLYLSHNQLNGSLPSS-FGNLSSLKHLHVHNINKLSGSIPKEI-GNLKSLSHLWLSKTQ 315
YL LS NQL SLP+ F L+ LK L + N N+L S+P + L L L L + Q
Sbjct: 79 TYLNLSTNQLQ-SLPNGVFDKLTQLKELAL-NTNQLQ-SLPDGVFDKLTQLKDLRLYQNQ 135
Query: 316 LSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNL 375
L L++++ +++ +N + P + LS +NK +G + + G++
Sbjct: 136 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVVRNSAGSV 188
Query: 376 S 376
+
Sbjct: 189 A 189
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 39/88 (44%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNG 86
YL+LS NQL L++LK L +TNQ + LT L LRL NQL
Sbjct: 79 TYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS 138
Query: 87 LIPEELGELTSLNELALSYNRLNGSIPA 114
+ LTSL + L N + + P
Sbjct: 139 VPDGVFDRLTSLQYIWLHDNPWDCTCPG 166
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNG 86
YLDL N L L+ L L N+ + LT+L L LS NQL
Sbjct: 31 TYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS 90
Query: 87 LIPEELGELTSLNELALSYNRLNGSIP 113
L +LT L ELAL+ N+L S+P
Sbjct: 91 LPNGVFDKLTQLKELALNTNQLQ-SLP 116
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 577 ANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEI 636
N+L L +L L +LNLS NQ + KL QL +L L+ N L ++P +
Sbjct: 61 GNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQL-QSLPDGV 119
Query: 637 CN-LESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIP 681
+ L L+ + L QN+L F R+ L I + N + P
Sbjct: 120 FDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 46 HLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSY 105
L+ L +L+ STNQ + LT L L L+ NQL L +LT L +L L
Sbjct: 74 KLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQ 133
Query: 106 NRLNGSIP 113
N+L S+P
Sbjct: 134 NQLK-SVP 140
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 327 LSNIRGLYIRENMLYGSIPEEL-GRLKSLSQLSLSVNKLNGSIPH-CLGNLSNLKFFALR 384
L+++ LY+ N L S+P + +L SL+ L+LS N+L S+P+ L+ LK AL
Sbjct: 51 LTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALN 108
Query: 385 ENELSGSIPQEI-ENMKKLNKYLLFENQF 412
N+L S+P + + + +L L++NQ
Sbjct: 109 TNQLQ-SLPDGVFDKLTQLKDLRLYQNQL 136
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Query: 264 HNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPS 323
++Q S+P+ ++ L +++ L + E L SL+ L+L +L
Sbjct: 15 YSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDE---LTSLTQLYLGGNKLQSLPNGV 71
Query: 324 LGNLSNIRGLYIRENMLYGSIPEEL-GRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFA 382
L+++ L + N L S+P + +L L +L+L+ N+L L+ LK
Sbjct: 72 FNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130
Query: 383 LRENELSGSIPQEI-ENMKKLNKYLLFENQFTGYLP 417
L +N+L S+P + + + L L +N + P
Sbjct: 131 LYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+RH NIV+F HL +V EY G L + N +E + + + + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSE---DEARFFFQQLISGV 128
Query: 890 SYMHHDCFPPILHRDISSKKVLLD--LEYKAHVSDFGTAK----FLKPDSSNWSELAGTC 943
SY H + HRD+ + LLD + + FG +K +P S+ GT
Sbjct: 129 SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-----VGTP 180
Query: 944 GYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGKHP 978
YIAPE+ + K DV++ GV + ++ G +P
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 186 TFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSG 245
T V N R+ S+P+ I + L LN NQ++ P +L NL+ LY + N+L+
Sbjct: 15 TLVNCQNIRL-ASVPAGIPTDKQ--RLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA 71
Query: 246 YIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHN 288
L L L+ N L +F NL SL H++++N
Sbjct: 72 IPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYN 114
Score = 37.7 bits (86), Expect = 0.030, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 188 VYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYI 247
++LNNN+I P +L +L L N N+L+ L+ L L L+DN L
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIP 97
Query: 248 PPKLGSFKSLLYLYLSHN 265
+ KSL ++YL +N
Sbjct: 98 RGAFDNLKSLTHIYLYNN 115
Score = 37.0 bits (84), Expect = 0.053, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 166 LHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEI-GNLRSLSYLGLNKNQLSGSIP 224
L+ N + + P L NL +Y N+N++ +IP+ + L L+ L LN N L SIP
Sbjct: 40 LNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLNDNHLK-SIP 97
Query: 225 PTA-GNLSNLKFLYLHDN 241
A NL +L +YL++N
Sbjct: 98 RGAFDNLKSLTHIYLYNN 115
Score = 37.0 bits (84), Expect = 0.055, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 221 GSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSS 280
S+P AG ++ + L+L++N+++ P +L LY + N+L F L+
Sbjct: 25 ASVP--AGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQ 82
Query: 281 LKHLHVHNINKLSGSIPK-EIGNLKSLSHLWL 311
L L + N N L SIP+ NLKSL+H++L
Sbjct: 83 LTQLDL-NDNHLK-SIPRGAFDNLKSLTHIYL 112
Score = 36.6 bits (83), Expect = 0.069, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 294 GSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKS 353
S+P I K LWL+ Q++ P +L N++ LY N L +L
Sbjct: 25 ASVPAGIPTDKQ--RLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQ 82
Query: 354 LSQLSLSVNKLNGSIPHCLGNLSNLK 379
L+QL L+ N L SIP G NLK
Sbjct: 83 LTQLDLNDNHLK-SIPR--GAFDNLK 105
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEIC 637
N+++KL P L L L ++N+ + + KL QL++LDL+ N L
Sbjct: 43 NQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFD 102
Query: 638 NLESLEYMNLLQN 650
NL+SL ++ L N
Sbjct: 103 NLKSLTHIYLYNN 115
Score = 31.2 bits (69), Expect = 3.1, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 33/76 (43%)
Query: 31 LSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPE 90
L+ NQ+ P HL L+ L F++N+ + I LT L L L+ N L +
Sbjct: 40 LNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRG 99
Query: 91 ELGELTSLNELALSYN 106
L SL + L N
Sbjct: 100 AFDNLKSLTHIYLYNN 115
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 37 GSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 208
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG---TCGYIAPELAYT-MR 955
I+HRD+ + ++ + + + DFG A+ E+AG T Y APE+ M
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMAGFVATRWYRAPEIMLNWMH 199
Query: 956 ANEKCDVFNFGVLVLEVIEGK 976
N+ D+++ G ++ E++ G+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG---TCGYIAPELAYT-MR 955
I+HRD+ + ++ + + + DFG A+ E+AG T Y APE+ M
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMAGFVATRWYRAPEIMLNWMH 199
Query: 956 ANEKCDVFNFGVLVLEVIEGK 976
N+ D+++ G ++ E++ G+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANAL 889
+RH NIV+F HL +V EY G L + N +E + + + + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSE---DEARFFFQQLISGV 128
Query: 890 SYMHHDCFPPILHRDISSKKVLLD--LEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIA 947
SY H + HRD+ + LLD + + FG +K S + GT YIA
Sbjct: 129 SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPKDTVGTPAYIA 184
Query: 948 PELAYTMRANEK-CDVFNFGVLVLEVIEGKHP 978
PE+ + K DV++ GV + ++ G +P
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 101/237 (42%), Gaps = 30/237 (12%)
Query: 759 SQEGQNDVNNQELL---SASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH- 809
S + NQ LL + F+ VL G+G GTVYK + A+K+L
Sbjct: 2 SHMASGEAPNQALLRILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 60
Query: 810 -SLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL---- 864
+ P I + +V + + + ++ + G C T + L+ + + G L +
Sbjct: 61 ATSPKANKEILDEAYV--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK 117
Query: 865 SNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFG 924
N + L+W ++ A ++Y+ ++HRD++++ VL+ ++DFG
Sbjct: 118 DNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFG 168
Query: 925 TAKFLKPDSSNWSELAGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
AK L + + G ++A E + DV+++GV V E++ G P
Sbjct: 169 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 12 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 71 V--MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 128 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 42 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 156
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 157 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 213
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 214 TVDIWSVGCIMAELLTGR 231
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 18/245 (7%)
Query: 154 DLGNLESPVSVS-------LHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNL 206
DLG P +S L N+ S + GL++L + L NN+I L
Sbjct: 42 DLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPL 101
Query: 207 RSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQ 266
R L L ++KN L IPP S+L L +HDNR+ +++ + + N
Sbjct: 102 RKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNP 158
Query: 267 L--NGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSL 324
L +G P +F L L +L + KL+G IPK++ ++L+ L L ++ L
Sbjct: 159 LENSGFEPGAFDGL-KLNYLRISEA-KLTG-IPKDLP--ETLNELHLDHNKIQAIELEDL 213
Query: 325 GNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALR 384
S + L + N + L L +L +L L NKL+ +P L +L L+ L
Sbjct: 214 LRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLH 272
Query: 385 ENELS 389
N ++
Sbjct: 273 TNNIT 277
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 470 IYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSS 529
I PD LLDL NN+ ++ L L + N+IS + +L KL S
Sbjct: 52 ISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111
Query: 530 NRLVGQIP 537
N LV +IP
Sbjct: 112 NHLV-EIP 118
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 207
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAY-TMRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNAMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 15 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 74 V--MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 131 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 181
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRV--NVIKGVAN 887
++H +IV+ S L++V+E+++ L + A A + +S+ V + ++ +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSEAVASHYMRQILE 141
Query: 888 ALSYMHHDCFPPILHRDISSKKVLL-DLEYKAHVS--DFGTAKFLKPDSSNWSELAGTCG 944
AL Y H + I+HRD+ + VLL E A V DFG A L GT
Sbjct: 142 ALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPH 198
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++APE+ + DV+ GV++ ++ G P
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 14 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 73 V--MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 130 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 15 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 74 V--MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 131 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 12 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 71 V--MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 128 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 11 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 70 V--MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 54 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 168
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 225
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 226 TVDIWSVGCIMAELLTGR 243
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 84/197 (42%), Gaps = 9/197 (4%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGFC 842
G G GTV+KA+ K L + G+ + + E++H+NIV+ +
Sbjct: 11 GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL 70
Query: 843 SHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILH 902
+ L LV+E+ ++ ++ +LD + + + L + H +LH
Sbjct: 71 HSDKKLTLVFEFCDQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLH 124
Query: 903 RDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR-ANEKCD 961
RD+ + +L++ + +++FG A+ +S T Y P++ + + + D
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ G + E+ P
Sbjct: 185 MWSAGCIFAELANAGRP 201
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + ++K + A+ Y+H I HRD+
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHS---INIAHRDVKP 143
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFN 964
+ +L + + +DFG AK +S +E T Y+APE+ + ++ CD+++
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 965 FGVLVLEVIEGKHP 978
GV++ ++ G P
Sbjct: 203 LGVIMYILLCGYPP 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 27 GSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 198
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 199 TVDIWSVGCIMAELLTGR 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 207
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 11 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 70 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIG-----INQKGFVSEITEIRHRNIVKF 838
G G G V+KA +L +G K + TGE G I + + + H N+V+
Sbjct: 20 GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL 79
Query: 839 YGFCSHTQ-----HLFLVYEYLERGSLATILSN---EATAAELDWSKRVNVIKGVANALS 890
+ C+ ++ L LV+E++++ L T L E +++G L
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG----LD 134
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPEL 950
++H ++HRD+ + +L+ + ++DFG A+ + + + T Y APE+
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPEV 190
Query: 951 AYTMRANEKCDVFNFGVLVLEVIEGK 976
D+++ G + E+ K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 253 SFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLS 312
S ++L+YL +SH + F LSSL+ L + + +P L++L+ L LS
Sbjct: 443 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 502
Query: 313 KTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCL 372
+ QL P + +LS+++ L + N + L SL L S+N + S L
Sbjct: 503 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 562
Query: 373 GNL-SNLKFFALRENELS-----GSIPQEIENMKKL 402
+ S+L F L +N+ + S Q I++ ++L
Sbjct: 563 QHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQL 598
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 612 IGKLVQLSKLDLSHNSLGG-NIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGL 666
IG L L +L+++HN + +P NL +LE+++L NK+ + R +H +
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 199
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIG-----INQKGFVSEITEIRHRNIVKF 838
G G G V+KA +L +G K + TGE G I + + + H N+V+
Sbjct: 20 GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL 79
Query: 839 YGFCSHTQ-----HLFLVYEYLERGSLATILSN---EATAAELDWSKRVNVIKGVANALS 890
+ C+ ++ L LV+E++++ L T L E +++G L
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG----LD 134
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPEL 950
++H ++HRD+ + +L+ + ++DFG A+ + + + T Y APE+
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPEV 190
Query: 951 AYTMRANEKCDVFNFGVLVLEVIEGK 976
D+++ G + E+ K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIG-----INQKGFVSEITEIRHRNIVKF 838
G G G V+KA +L +G K + TGE G I + + + H N+V+
Sbjct: 20 GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL 79
Query: 839 YGFCSHTQ-----HLFLVYEYLERGSLATILSN---EATAAELDWSKRVNVIKGVANALS 890
+ C+ ++ L LV+E++++ L T L E +++G L
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG----LD 134
Query: 891 YMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPEL 950
++H ++HRD+ + +L+ + ++DFG A+ + + + T Y APE+
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPEV 190
Query: 951 AYTMRANEKCDVFNFGVLVLEVIEGK 976
D+++ G + E+ K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + ++K + A+ Y+H I HRD+
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHS---INIAHRDVKP 145
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKCD 961
+ +L + + +DFG AK ++++ + L C Y+APE+ + ++ CD
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GV++ ++ G P
Sbjct: 202 MWSLGVIMYILLCGYPP 218
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ + E+
Sbjct: 11 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ 65
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+
Sbjct: 66 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117
Query: 872 ELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLK 930
L + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 931 PDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 175 RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 50 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 164
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 221
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 222 TVDIWSVGCIMAELLTGR 239
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 43 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 214
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 215 TVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 43 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 214
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 215 TVDIWSVGCIMAELLTGR 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 37 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 152 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 208
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 18 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 77 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 134 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 184
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 11 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 70 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 51 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 222
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 223 TVDIWSVGCIMAELLTGR 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 204
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 21 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 80 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 136
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 137 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 187
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 188 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 14 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 73 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 130 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 18 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 77 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 134 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 11 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 70 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 5 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 64 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 121 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 172 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 11 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 70 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 14 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 73 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 130 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 14 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 73 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 130 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ + E+
Sbjct: 11 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ 65
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+
Sbjct: 66 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117
Query: 872 ELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLK 930
L + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 931 PDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 175 RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+K+L + P I + +
Sbjct: 8 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 67 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 123
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 124 ------AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 175 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 148 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 204
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 159 ESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQ 218
ES + ++L +N +G + R L + + L+NNRI+ SIP ++ +L++L L + NQ
Sbjct: 428 ESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQ 484
Query: 219 LSGSIPPTAGNLSNLKFLYLHDNRLSGYIP 248
L L++L++++LHDN P
Sbjct: 485 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 224 PPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSF--GNLSSL 281
PP+ S+ FL N + + + K L L L N L + N+SSL
Sbjct: 349 PPSP---SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSL 405
Query: 282 KHLHVHNINKL-SGSIPKEIGNLKSLSHLWLSKTQLSGFI----PPSLGNLSNIRGLYIR 336
+ L V ++N L S + + +S+ L LS L+G + PP ++ L +
Sbjct: 406 ETLDV-SLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPP------KVKVLDLH 458
Query: 337 ENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIP 393
N + SIP+++ L++L +L+++ N+L L++L++ L +N + P
Sbjct: 459 NNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 597 LNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPI 656
LNLS+N + + + V++ LDL HN+ +IP ++ +L++L+ +N+ N+L
Sbjct: 433 LNLSSNMLTGSVFRCLPPKVKV--LDL-HNNRIMSIPKDVTHLQALQELNVASNQLKSVP 489
Query: 657 PSCFRRMHGLSSIDVSYNELQGSIP 681
F R+ L I + N + P
Sbjct: 490 DGVFDRLTSLQYIWLHDNPWDCTCP 514
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%)
Query: 49 KLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNRL 108
+ K L S N S + P I L+ L VLRLS N++ L L L +S+NRL
Sbjct: 53 RTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRL 112
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 70/165 (42%), Gaps = 30/165 (18%)
Query: 371 CLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFS 430
C + S+ F +N + S+ Q +K+L +L N +
Sbjct: 348 CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFK------------- 394
Query: 431 VRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPD-LELLDLSNNNFFGEIS 489
+ +N +SL +L + N L + + + + + +L+LS+N G +
Sbjct: 395 ---------VALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV- 444
Query: 490 SNWIKC--PQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRL 532
+C P++ L++ N I +IP ++ ++ L +L+ +SN+L
Sbjct: 445 ---FRCLPPKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQL 485
Score = 30.0 bits (66), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 448 TSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQ--LATLNMGG 505
+ L LRL N++ VF DLE LD+S+N N CP L L++
Sbjct: 76 SELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRL-----QNISCCPMASLRHLDLSF 130
Query: 506 NEISGT-IPSEIGNMTQLHKLDFSSNRL 532
N+ + E GN+T+L L S+ +
Sbjct: 131 NDFDVLPVCKEFGNLTKLTFLGLSAAKF 158
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 207
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + ++K + A+ Y+H I HRD+
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHS---INIAHRDVKP 144
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKCD 961
+ +L + + +DFG AK ++++ + L C Y+APE+ + ++ CD
Sbjct: 145 ENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 200
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GV++ ++ G P
Sbjct: 201 MWSLGVIMYILLCGYPP 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 30 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 87
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 144
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 145 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 201
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 202 TVDIWSVGCIMAELLTGR 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + ++K + A+ Y+H I HRD+
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHS---INIAHRDVKP 143
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKCD 961
+ +L + + +DFG AK ++++ + L C Y+APE+ + ++ CD
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GV++ ++ G P
Sbjct: 200 MWSLGVIMYILLCGYPP 216
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + ++K + A+ Y+H I HRD+
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHS---INIAHRDVKP 150
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKCD 961
+ +L + + +DFG AK ++++ + L C Y+APE+ + ++ CD
Sbjct: 151 ENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 206
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GV++ ++ G P
Sbjct: 207 MWSLGVIMYILLCGYPP 223
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 207
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 204
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 29 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 86
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 143
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 200
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 201 TVDIWSVGCIMAELLTGR 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 204
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + ++K + A+ Y+H I HRD+
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHS---INIAHRDVKP 149
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKCD 961
+ +L + + +DFG AK ++++ + L C Y+APE+ + ++ CD
Sbjct: 150 ENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 205
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GV++ ++ G P
Sbjct: 206 MWSLGVIMYILLCGYPP 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 37 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 208
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 28 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 142
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 199
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 200 TVDIWSVGCIMAELLTGR 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + ++K + A+ Y+H I HRD+
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHS---INIAHRDVKP 159
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKCD 961
+ +L + + +DFG AK ++++ + L C Y+APE+ + ++ CD
Sbjct: 160 ENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 215
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GV++ ++ G P
Sbjct: 216 MWSLGVIMYILLCGYPP 232
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + ++K + A+ Y+H I HRD+
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHS---INIAHRDVKP 151
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKCD 961
+ +L + + +DFG AK ++++ + L C Y+APE+ + ++ CD
Sbjct: 152 ENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 207
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GV++ ++ G P
Sbjct: 208 MWSLGVIMYILLCGYPP 224
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 7/166 (4%)
Query: 273 SSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRG 332
++F L+ L L++ + N+L +L L L L+ QL+ +L+ +
Sbjct: 53 ATFRGLTKLTWLNL-DYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDK 111
Query: 333 LYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSI 392
LY+ N L RL L +L L+ N+L L+NL+ +L N+L S+
Sbjct: 112 LYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SV 170
Query: 393 PQ-EIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFV 437
P + + KL LF NQF + C++ L+ + N+N V
Sbjct: 171 PHGAFDRLGKLQTITLFGNQFDC----SRCETLYLSQWIRENSNKV 212
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 222 SIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSL 281
S+P +G ++ + L L L+ L +L L +NQL F +L+ L
Sbjct: 28 SVP--SGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTEL 85
Query: 282 KHLHVHNINKLSGSIPKEI-GNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENML 340
L + N N+L+ S+P + +L L L+L QL L+ ++ L + N L
Sbjct: 86 GTLGLAN-NQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL 143
Query: 341 YGSIPE-ELGRLKSLSQLSLSVNKLNGSIPHC----LGNLSNLKFFA 382
SIP +L +L LSLS N+L S+PH LG L + F
Sbjct: 144 Q-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFG 188
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 151 IPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLS 210
IP D L+ L + + + + GL LT++ L+ N++ +L L
Sbjct: 33 IPADTEKLD------LQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86
Query: 211 YLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGS 270
LGL NQL+ +L+ L LYL N+L L L L+ NQL
Sbjct: 87 TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146
Query: 271 LPSSFGNLSSLKHLHVHNINKLSGSIP----KEIGNLKSLS 307
+F L++L+ L + + N+L S+P +G L++++
Sbjct: 147 PAGAFDKLTNLQTLSL-STNQLQ-SVPHGAFDRLGKLQTIT 185
Score = 37.4 bits (85), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 29 LDLSVNQLFGTIPTQI-SHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGL 87
L L+ NQL ++P + HL++L L NQ + LT L LRL+ NQL +
Sbjct: 88 LGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146
Query: 88 IPEELGELTSLNELALSYNRLNGSIP 113
+LT+L L+LS N+L S+P
Sbjct: 147 PAGAFDKLTNLQTLSLSTNQLQ-SVP 171
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 31 LSVNQLFGTIPTQI-SHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIP 89
L NQL ++P+ + L+KLK L +TNQ I LTNL L LS NQL +
Sbjct: 114 LGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172
Query: 90 EELGELTSLNELALSYNRLNGS 111
L L + L N+ + S
Sbjct: 173 GAFDRLGKLQTITLFGNQFDCS 194
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNG 86
+L+L NQL L++L L + NQ + + LT L L L NQL
Sbjct: 62 TWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS 121
Query: 87 LIPEELGELTSLNELALSYNRLNGSIPA 114
L LT L EL L+ N+L SIPA
Sbjct: 122 LPSGVFDRLTKLKELRLNTNQLQ-SIPA 148
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 25/116 (21%)
Query: 591 LRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNS-------------------LGGN 631
L KL LNL NQ + L +L L L++N LGGN
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 632 ----IPSEICN-LESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682
+PS + + L L+ + L N+L F ++ L ++ +S N+LQ S+PH
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPH 172
Score = 30.0 bits (66), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 448 TSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNE 507
T L L L+ NQL + VF +L L L+NN + QL L +GGN+
Sbjct: 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQ 118
Query: 508 ISGTIPSEI-GNMTQLHKLDFSSNRL 532
+ ++PS + +T+L +L ++N+L
Sbjct: 119 LK-SLPSGVFDRLTKLKELRLNTNQL 143
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 27 GSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG---TCGYIAPELAYT-MR 955
I+HRD+ + ++ + + + DFG A+ E+AG T Y APE+ M
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMAGFVATRWYRAPEIMLNWMH 195
Query: 956 ANEKCDVFNFGVLVLEVIEGK 976
N+ D+++ G ++ E++ G+
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 43 GSGAYGSVCAAFDTKTGLRVAVKKL-SKPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 214
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 215 TVDIWSVGCIMAELLTGR 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 11 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 65
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+
Sbjct: 66 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117
Query: 872 ELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLK 930
L + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 931 PDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 175 RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 42 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 156
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 157 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 213
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 214 TVDIWSVGCIMAELLTGR 231
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 11 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 65
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+
Sbjct: 66 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117
Query: 872 ELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLK 930
L + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 931 PDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 175 RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 12 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 66
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+
Sbjct: 67 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 118
Query: 872 ELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLK 930
L + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 119 TLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 175
Query: 931 PDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 176 RGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 15 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 69
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+
Sbjct: 70 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 121
Query: 872 ELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLK 930
L + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 122 TLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 178
Query: 931 PDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 179 RGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQ 209
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQ 209
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 209
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVA 886
+ + H NI++ Y ++LV E G L + ++ E D ++ ++K V
Sbjct: 60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDVL 116
Query: 887 NALSYMHHDCFPPILHRDISSKKVLL---DLEYKAHVSDFGTAKFLKPDSSNWSELAGTC 943
+A++Y H + HRD+ + L + + DFG A KP +++ GT
Sbjct: 117 SAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV-GTP 172
Query: 944 GYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y++P++ + E CD ++ GV++ ++ G P
Sbjct: 173 YYVSPQVLEGLYGPE-CDEWSAGVMMYVLLCGYPP 206
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 22/151 (14%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPEL----AYTMR 955
I+HRDI +LLD + DFG + L DS + AG Y+APE A
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 956 ANEKCDVFNFGVLVLEVIEGKHPGHFXXXXXXXXXXXXNMNIVVNDL--IDSRLPPPLGE 1013
+ + DV++ G+ + E+ G+ P N V + L + PP L
Sbjct: 206 YDVRSDVWSLGITLYELATGRFP-------------YPKWNSVFDQLTQVVKGDPPQLSN 252
Query: 1014 VEEK--LKSMIAVAFLCLDANPDCRPTMQKV 1042
EE+ S I LCL + RP +++
Sbjct: 253 SEEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 785 GTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGFC 842
G G GTV+KA+ K L + G+ + + E++H+NIV+ +
Sbjct: 11 GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL 70
Query: 843 SHTQHLFLVYEYLERGSLATILS-NEATAAELDWSKRVNVIKGVANALSYMHHDCFPPIL 901
+ L LV+E+ ++ S N E+ S ++KG L + H +L
Sbjct: 71 HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG----LGFCHSR---NVL 123
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRA-NEKC 960
HRD+ + +L++ + ++DFG A+ +S T Y P++ + + +
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ G + E+ P
Sbjct: 184 DMWSAGCIFAELANAARP 201
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 37 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 208
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 115/304 (37%), Gaps = 75/304 (24%)
Query: 785 GTGGCGTVYKAE---LTSGD---TRAVKKLHSLPTGEIGINQKGFVSEITEIR----HRN 834
G G G V +A L D T AVK L P+ + ++ +SE+ + H N
Sbjct: 55 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHL-TEREALMSELKVLSYLGNHMN 111
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATA-------------------AELDW 875
IV G C+ ++ EY G L L + + E
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 876 SKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935
S V KG+A S +C +HRD++++ +LL + DFG A+ +K DS+
Sbjct: 172 SFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSN- 223
Query: 936 WSELAGTC----GYIAPELAYTMRANEKCDVFNFGVLVLEVI---EGKHPGHFXXXXXXX 988
+ G ++APE + + DV+++G+ + E+ +PG
Sbjct: 224 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-------- 274
Query: 989 XXXXXNMNIVVNDLIDSRLPPPLGE------VEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+DS+ + E E M + C DA+P RPT +++
Sbjct: 275 -------------PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
Query: 1043 CNLL 1046
L+
Sbjct: 322 VQLI 325
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 827 ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVA 886
+ + H NI++ Y ++LV E G L + ++ E D ++ ++K V
Sbjct: 77 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDVL 133
Query: 887 NALSYMHHDCFPPILHRDISSKKVLL---DLEYKAHVSDFGTAKFLKPDSSNWSELAGTC 943
+A++Y H + HRD+ + L + + DFG A KP +++ GT
Sbjct: 134 SAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV-GTP 189
Query: 944 GYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y++P++ + E CD ++ GV++ ++ G P
Sbjct: 190 YYVSPQVLEGLYGPE-CDEWSAGVMMYVLLCGYPP 223
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
+HRD++++ +LL + + DFG A+ + PD + ++APE +
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 959 KCDVFNFGVLVLEVI 973
+ DV++FGVL+ E+
Sbjct: 275 QSDVWSFGVLLWEIF 289
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 273 SSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRG 332
++F L+ L L++ + N+L +L L L L+ QL+ +L+ +
Sbjct: 53 ATFRGLTKLTWLNL-DYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDK 111
Query: 333 LYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSI 392
LY+ N L RL L +L L+ N+L L+NL+ +L N+L S+
Sbjct: 112 LYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SV 170
Query: 393 PQ-EIENMKKLNKYLLFENQF 412
P + + KL LF NQF
Sbjct: 171 PHGAFDRLGKLQTITLFGNQF 191
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 222 SIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSL 281
S+P +G ++ + L L L+ L +L L +NQL F +L+ L
Sbjct: 28 SVP--SGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTEL 85
Query: 282 KHLHVHNINKLSGSIPKEI-GNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENML 340
L + N N+L+ S+P + +L L L+L QL L+ ++ L + N L
Sbjct: 86 GTLGLAN-NQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL 143
Query: 341 YGSIPE-ELGRLKSLSQLSLSVNKLNGSIPHC----LGNLSNLKFFA 382
SIP +L +L LSLS N+L S+PH LG L + F
Sbjct: 144 Q-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFG 188
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 151 IPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLS 210
IP D L+ L + + + + GL LT++ L+ N++ +L L
Sbjct: 33 IPADTEKLD------LQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86
Query: 211 YLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGS 270
LGL NQL+ +L+ L LYL N+L L L L+ NQL
Sbjct: 87 TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146
Query: 271 LPSSFGNLSSLKHLHVHNINKLSGSIP----KEIGNLKSLS 307
+F L++L+ L + + N+L S+P +G L++++
Sbjct: 147 PAGAFDKLTNLQTLSL-STNQLQ-SVPHGAFDRLGKLQTIT 185
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 29 LDLSVNQLFGTIPTQI-SHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGL 87
L L+ NQL ++P + HL++L L NQ + LT L LRL+ NQL +
Sbjct: 88 LGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146
Query: 88 IPEELGELTSLNELALSYNRLNGSIP 113
+LT+L L+LS N+L S+P
Sbjct: 147 PAGAFDKLTNLQTLSLSTNQLQ-SVP 171
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 31 LSVNQLFGTIPTQI-SHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIP 89
L NQL ++P+ + L+KLK L +TNQ I LTNL L LS NQL +
Sbjct: 114 LGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172
Query: 90 EELGELTSLNELALSYNRLNGS 111
L L + L N+ + S
Sbjct: 173 GAFDRLGKLQTITLFGNQFDCS 194
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNG 86
+L+L NQL L++L L + NQ + + LT L L L NQL
Sbjct: 62 TWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS 121
Query: 87 LIPEELGELTSLNELALSYNRLNGSIPA 114
L LT L EL L+ N+L SIPA
Sbjct: 122 LPSGVFDRLTKLKELRLNTNQLQ-SIPA 148
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 25/116 (21%)
Query: 591 LRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNS-------------------LGGN 631
L KL LNL NQ + L +L L L++N LGGN
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 632 ----IPSEICN-LESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682
+PS + + L L+ + L N+L F ++ L ++ +S N+LQ S+PH
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPH 172
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 448 TSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNE 507
T L L L+ NQL + VF +L L L+NN + QL L +GGN+
Sbjct: 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQ 118
Query: 508 ISGTIPSEI-GNMTQLHKLDFSSNRL 532
+ ++PS + +T+L +L ++N+L
Sbjct: 119 LK-SLPSGVFDRLTKLKELRLNTNQL 143
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQ 209
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
+HRD++++ +LL + + DFG A+ + PD + ++APE +
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 959 KCDVFNFGVLVLEVI 973
+ DV++FGVL+ E+
Sbjct: 280 QSDVWSFGVLLWEIF 294
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 54 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 168
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + T Y APE+ M N+
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY---VATRWYRAPEIMLNWMHYNQ 225
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 226 TVDIWSVGCIMAELLTGR 243
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
+HRD++++ +LL + + DFG A+ + PD + ++APE +
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 959 KCDVFNFGVLVLEVI 973
+ DV++FGVL+ E+
Sbjct: 273 QSDVWSFGVLLWEIF 287
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
+HRD++++ +LL + + DFG A+ + PD + ++APE +
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 959 KCDVFNFGVLVLEVI 973
+ DV++FGVL+ E+
Sbjct: 282 QSDVWSFGVLLWEIF 296
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 11 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 65
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+
Sbjct: 66 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117
Query: 872 ELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLK 930
L + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 931 PDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 175 RGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHS----LPTGE-IGINQKGFVSEITEIRHRNIVKF 838
G GG G VY + +G A+K L + GE + +N++ +S ++ IV
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM 257
Query: 839 -YGFCSHT-QHLFLVYEYLERGSLATILSNEATAAELDWS-KRVNVIKGVANALSYMHHD 895
Y F HT L + + + G L LS +E D +I G L +MH+
Sbjct: 258 SYAF--HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 311
Query: 896 CFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL---KPDSSNWSELAGTCGYIAPE-LA 951
+++RD+ +LLD +SD G A KP +S GT GY+APE L
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQ 363
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ + D F+ G ++ +++ G P
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 30 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 84
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+ ++ + + + A
Sbjct: 85 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 135
Query: 872 ELDWSKRVNV-IKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFL 929
+ V + + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 136 QTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
Query: 930 KPDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 193 VRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 19 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 73
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+
Sbjct: 74 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 125
Query: 872 ELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLK 930
L + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 126 TLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 182
Query: 931 PDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 183 RGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHS----LPTGE-IGINQKGFVSEITEIRHRNIVKF 838
G GG G VY + +G A+K L + GE + +N++ +S ++ IV
Sbjct: 197 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM 256
Query: 839 -YGFCSHT-QHLFLVYEYLERGSLATILSNEATAAELDWS-KRVNVIKGVANALSYMHHD 895
Y F HT L + + + G L LS +E D +I G L +MH+
Sbjct: 257 SYAF--HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 310
Query: 896 CFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL---KPDSSNWSELAGTCGYIAPE-LA 951
+++RD+ +LLD +SD G A KP +S GT GY+APE L
Sbjct: 311 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQ 362
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ + D F+ G ++ +++ G P
Sbjct: 363 KGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 253 SFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLS 312
S ++L+YL +SH + F LSSL+ L + + +P L++L+ L LS
Sbjct: 124 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 183
Query: 313 KTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCL 372
+ QL P + +LS+++ L + N + L SL L S+N + S L
Sbjct: 184 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243
Query: 373 GNL-SNLKFFALRENELS-----GSIPQEIENMKKL 402
+ S+L F L +N+ + S Q I++ ++L
Sbjct: 244 QHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQL 279
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNG 86
+LDLS QL PT + LS L+ L+ S N F + L +L VL S+N +
Sbjct: 178 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 237
Query: 87 LIPEELGEL-TSLNELALSYN 106
+EL +SL L L+ N
Sbjct: 238 SKKQELQHFPSSLAFLNLTQN 258
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHS----LPTGE-IGINQKGFVSEITEIRHRNIVKF 838
G GG G VY + +G A+K L + GE + +N++ +S ++ IV
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM 257
Query: 839 -YGFCSHT-QHLFLVYEYLERGSLATILSNEATAAELDWS-KRVNVIKGVANALSYMHHD 895
Y F HT L + + + G L LS +E D +I G L +MH+
Sbjct: 258 SYAF--HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 311
Query: 896 CFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL---KPDSSNWSELAGTCGYIAPE-LA 951
+++RD+ +LLD +SD G A KP +S GT GY+APE L
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQ 363
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ + D F+ G ++ +++ G P
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHS----LPTGE-IGINQKGFVSEITEIRHRNIVKF 838
G GG G VY + +G A+K L + GE + +N++ +S ++ IV
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM 257
Query: 839 -YGFCSHT-QHLFLVYEYLERGSLATILSNEATAAELDWS-KRVNVIKGVANALSYMHHD 895
Y F HT L + + + G L LS +E D +I G L +MH+
Sbjct: 258 SYAF--HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 311
Query: 896 CFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL---KPDSSNWSELAGTCGYIAPE-LA 951
+++RD+ +LLD +SD G A KP +S GT GY+APE L
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQ 363
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ + D F+ G ++ +++ G P
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 785 GTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIGINQKGFVSEITEIRHRNIVKF-Y 839
G G G VY+A+L SG+ A+KK+ E+ I +K + H NIV+ Y
Sbjct: 41 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRLRY 92
Query: 840 GFCSHTQ-----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNV-IKGVANALSYMH 893
F S + +L LV +Y+ ++ + + + A + V + + + +L+Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 894 HDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAY 952
I HRDI + +LLD + + DFG+AK L N S + Y APEL +
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 207
Query: 953 -TMRANEKCDVFNFGVLVLEVIEGK 976
DV++ G ++ E++ G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 51 GSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + T Y APE+ M N+
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---XVATRWYRAPEIMLNWMHYNQ 222
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 223 TVDIWSVGCIMAELLTGR 240
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + ++K + A+ Y+H I HRD+
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHS---INIAHRDVKP 195
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKCD 961
+ +L + + +DFG AK ++++ + L C Y+APE+ + ++ CD
Sbjct: 196 ENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 251
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GV++ ++ G P
Sbjct: 252 MWSLGVIMYILLCGYPP 268
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 28 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 142
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 199
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 200 TVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 27 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N+
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 198
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 199 TVDIWSVGCIMAELLTGR 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 26/216 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLHSL--PTGEIGINQKGF 823
+L + F+ VL G+G GTVYK + A+ +L P I + +
Sbjct: 45 ILKETEFKKIKVL-GSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W V
Sbjct: 104 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--V 158
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
+ KG ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 159 QIAKG----MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 211
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
G ++A E + DV+++GV V E++
Sbjct: 212 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 247
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + ++K + A+ Y+H I HRD+
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHS---INIAHRDVKP 189
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKCD 961
+ +L + + +DFG AK ++++ + L C Y+APE+ + ++ CD
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GV++ ++ G P
Sbjct: 246 MWSLGVIMYILLCGYPP 262
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 785 GTGGCGTVYKAELTSGDT----RAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYG 840
G G TVYK + D + ++ H I + VS + +++H NIV +
Sbjct: 11 GEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIRE---VSLLKDLKHANIVTLHD 67
Query: 841 FCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSK--RVNVIKGVANALSYMHHDCFP 898
+ L LV+EYL++ L L + + K +++G L+Y H
Sbjct: 68 IIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRG----LAYCHRQ--- 119
Query: 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LAYTMRAN 957
+LHRD+ + +L++ + ++DFG A+ + + T Y P+ L + +
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 958 EKCDVFNFGVLVLEVIEGK 976
+ D++ G + E+ G+
Sbjct: 180 TQIDMWGVGCIFYEMATGR 198
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V+ + + HRN+++ YG T + +V E GSL L L R V
Sbjct: 66 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 122
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW---SELA 940
VA + Y+ F +HRD++++ +LL + DFG + L + ++
Sbjct: 123 QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ APE T + D + FGV + E+ G+ P
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V+ + + HRN+++ YG T + +V E GSL L L R V
Sbjct: 66 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 122
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW---SELA 940
VA + Y+ F +HRD++++ +LL + DFG + L + ++
Sbjct: 123 QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ APE T + D + FGV + E+ G+ P
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V+ + + HRN+++ YG T + +V E GSL L L R V
Sbjct: 62 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW---SELA 940
VA + Y+ F +HRD++++ +LL + DFG + L + ++
Sbjct: 119 QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ APE T + D + FGV + E+ G+ P
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V+ + + HRN+++ YG T + +V E GSL L L R V
Sbjct: 72 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 128
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW---SELA 940
VA + Y+ F +HRD++++ +LL + DFG + L + ++
Sbjct: 129 QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ APE T + D + FGV + E+ G+ P
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V+ + + HRN+++ YG T + +V E GSL L L R V
Sbjct: 62 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW---SELA 940
VA + Y+ F +HRD++++ +LL + DFG + L + ++
Sbjct: 119 QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ APE T + D + FGV + E+ G+ P
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 24 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 78
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+
Sbjct: 79 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 130
Query: 872 ELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLK 930
L + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 131 TLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 187
Query: 931 PDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 188 RGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 23 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 77
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+ ++ + + + A
Sbjct: 78 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 128
Query: 872 ELDWSKRVNV-IKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFL 929
+ V + + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 129 QTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 930 KPDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 186 VRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---XVATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + ++K + A+ Y+H I HRD+
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHS---INIAHRDVKP 145
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKCD 961
+ +L + + +DFG AK ++++ + L C Y+APE+ + ++ CD
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 962 VFNFGVLVLEVIEGKHP 978
+++ GV++ ++ G P
Sbjct: 202 MWSLGVIMYILLCGYPP 218
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 115/304 (37%), Gaps = 75/304 (24%)
Query: 785 GTGGCGTVYKAE---LTSGD---TRAVKKLHSLPTGEIGINQKGFVSEITEIR----HRN 834
G G G V +A L D T AVK L P+ + ++ +SE+ + H N
Sbjct: 50 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHL-TEREALMSELKVLSYLGNHMN 106
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATA-------------------AELDW 875
IV G C+ ++ EY G L L + + E
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 876 SKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935
S V KG+A S +C +HRD++++ +LL + DFG A+ +K DS+
Sbjct: 167 SFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN- 218
Query: 936 WSELAGTC----GYIAPELAYTMRANEKCDVFNFGVLVLEVI---EGKHPGHFXXXXXXX 988
+ G ++APE + + DV+++G+ + E+ +PG
Sbjct: 219 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-------- 269
Query: 989 XXXXXNMNIVVNDLIDSRLPPPLGE------VEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+DS+ + E E M + C DA+P RPT +++
Sbjct: 270 -------------PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 316
Query: 1043 CNLL 1046
L+
Sbjct: 317 VQLI 320
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 115/304 (37%), Gaps = 75/304 (24%)
Query: 785 GTGGCGTVYKAE---LTSGD---TRAVKKLHSLPTGEIGINQKGFVSEITEIR----HRN 834
G G G V +A L D T AVK L P+ + ++ +SE+ + H N
Sbjct: 55 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHL-TEREALMSELKVLSYLGNHMN 111
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATA-------------------AELDW 875
IV G C+ ++ EY G L L + + E
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 876 SKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935
S V KG+A S +C +HRD++++ +LL + DFG A+ +K DS+
Sbjct: 172 SFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN- 223
Query: 936 WSELAGTC----GYIAPELAYTMRANEKCDVFNFGVLVLEVI---EGKHPGHFXXXXXXX 988
+ G ++APE + + DV+++G+ + E+ +PG
Sbjct: 224 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-------- 274
Query: 989 XXXXXNMNIVVNDLIDSRLPPPLGE------VEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+DS+ + E E M + C DA+P RPT +++
Sbjct: 275 -------------PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
Query: 1043 CNLL 1046
L+
Sbjct: 322 VQLI 325
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N + +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG + + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 785 GTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIGINQKGFVSEITEIRHRNIVKF-Y 839
G G G VY+A+L SG+ A+KK+ E+ I +K + H NIV+ Y
Sbjct: 108 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRLRY 159
Query: 840 GFCSHTQ-----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNV-IKGVANALSYMH 893
F S + +L LV +Y+ ++ + + + A + V + + + +L+Y+H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 894 HDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAY 952
I HRDI + +LLD + + DFG+AK L N S + Y APEL +
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 274
Query: 953 -TMRANEKCDVFNFGVLVLEVIEGK 976
DV++ G ++ E++ G+
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 115/304 (37%), Gaps = 75/304 (24%)
Query: 785 GTGGCGTVYKAE---LTSGD---TRAVKKLHSLPTGEIGINQKGFVSEITEIR----HRN 834
G G G V +A L D T AVK L P+ + ++ +SE+ + H N
Sbjct: 32 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHL-TEREALMSELKVLSYLGNHMN 88
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATA-------------------AELDW 875
IV G C+ ++ EY G L L + + E
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 876 SKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935
S V KG+A S +C +HRD++++ +LL + DFG A+ +K DS+
Sbjct: 149 SFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN- 200
Query: 936 WSELAGTC----GYIAPELAYTMRANEKCDVFNFGVLVLEVI---EGKHPGHFXXXXXXX 988
+ G ++APE + + DV+++G+ + E+ +PG
Sbjct: 201 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-------- 251
Query: 989 XXXXXNMNIVVNDLIDSRLPPPLGE------VEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+DS+ + E E M + C DA+P RPT +++
Sbjct: 252 -------------PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298
Query: 1043 CNLL 1046
L+
Sbjct: 299 VQLI 302
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 115/304 (37%), Gaps = 75/304 (24%)
Query: 785 GTGGCGTVYKAE---LTSGD---TRAVKKLHSLPTGEIGINQKGFVSEITEIR----HRN 834
G G G V +A L D T AVK L P+ + ++ +SE+ + H N
Sbjct: 48 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHL-TEREALMSELKVLSYLGNHMN 104
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATA-------------------AELDW 875
IV G C+ ++ EY G L L + + E
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 876 SKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935
S V KG+A S +C +HRD++++ +LL + DFG A+ +K DS+
Sbjct: 165 SFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN- 216
Query: 936 WSELAGTC----GYIAPELAYTMRANEKCDVFNFGVLVLEVI---EGKHPGHFXXXXXXX 988
+ G ++APE + + DV+++G+ + E+ +PG
Sbjct: 217 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-------- 267
Query: 989 XXXXXNMNIVVNDLIDSRLPPPLGE------VEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042
+DS+ + E E M + C DA+P RPT +++
Sbjct: 268 -------------PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 314
Query: 1043 CNLL 1046
L+
Sbjct: 315 VQLI 318
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 184 NLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRL 243
N ++ L N I +LR L L L+KN + L +L L L DNRL
Sbjct: 36 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRL 95
Query: 244 SGYIPPKLGSFKSLLYLYLSHNQLNGSLPS-SFGNLSSLKHLHVHNINKL--------SG 294
+ L L+L +N + S+PS +F + SL+ L + + +L G
Sbjct: 96 TTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEG 154
Query: 295 SIP-----------KEIGNLKS---LSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENML 340
+ K+I NL + L L LS +L P S L+++R L++ +
Sbjct: 155 LVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 214
Query: 341 YGSIPEELGRLKSLSQLSLSVNKLNGSIPH 370
LKSL +L+LS N L S+PH
Sbjct: 215 ATIERNAFDDLKSLEELNLSHNNL-MSLPH 243
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQ--------------IGKLVQLSKLDL 623
NR+ L +LGEL++L + +S F ++++ + LV+L +L+L
Sbjct: 128 NRVPSLRRLDLGELKRLEY--ISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELEL 185
Query: 624 SHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683
S N L P L SL + L+ +++ + F + L +++S+N L S+PH
Sbjct: 186 SGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM-SLPHD 244
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 97/244 (39%), Gaps = 27/244 (11%)
Query: 51 KHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNRLNG 110
++L+ N I L +L +L+LS N + + L SLN L L NRL
Sbjct: 38 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT- 96
Query: 111 SIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLISPHYGSIPQ----DLGNLESPVSVSL 166
++P IP S + +P DLG L+ +S
Sbjct: 97 TVPTQAFEYLSKLRELWLRNNPIESIP-------SYAFNRVPSLRRLDLGELKRLEYIS- 148
Query: 167 HTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPT 226
+ GL NL ++ L + IP+ +R L L L+ N+L P +
Sbjct: 149 ---------EAAFEGLVNLRYLNLGMCNL-KDIPNLTALVR-LEELELSGNRLDLIRPGS 197
Query: 227 AGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSS-FGNLSSLKHLH 285
L++L+ L+L +++ KSL L LSHN L SLP F L L+ +H
Sbjct: 198 FQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL-MSLPHDLFTPLHRLERVH 256
Query: 286 V-HN 288
+ HN
Sbjct: 257 LNHN 260
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 582 KLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLES 641
K IP NL L +L L LS N+ L L KL L H + + +L+S
Sbjct: 169 KDIP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKS 227
Query: 642 LEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYN 674
LE +NL N L F +H L + +++N
Sbjct: 228 LEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 103/274 (37%), Gaps = 42/274 (15%)
Query: 220 SGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLS 279
+G+ P A + SN + R +P + + YL L N + +F
Sbjct: 2 TGTSCPAACSCSNQASRVICTRRELAEVPASIPV--NTRYLNLQENSIQVIRTDTF---- 55
Query: 280 SLKHLHVHNINKLSGSIPKEI-----GNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLY 334
KHL I +LS ++ ++I L SL+ L L +L+ + LS +R L+
Sbjct: 56 --KHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELW 113
Query: 335 IRENMLYGSIPE-ELGRLKSLSQLSL-SVNKLNGSIPHCLGNLSNLKFFALRENELSGSI 392
+R N + SIP R+ SL +L L + +L L NL++ L L
Sbjct: 114 LRNNPI-ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL---- 168
Query: 393 PQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYS 452
++I N+ L + L + N P S Q TSL
Sbjct: 169 -KDIPNLTALVR---------------------LEELELSGNRLDLIRPGSFQGLTSLRK 206
Query: 453 LRLERNQLTGNISEVFGIYPDLELLDLSNNNFFG 486
L L Q+ F LE L+LS+NN
Sbjct: 207 LWLMHAQVATIERNAFDDLKSLEELNLSHNNLMS 240
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 7/173 (4%)
Query: 178 SLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGN-LSNLKFL 236
+ GL +L + L +NR+ L L L L N + SIP A N + +L+ L
Sbjct: 78 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRL 136
Query: 237 YLHDNRLSGYIPPKLGSFKSLLYL-YLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGS 295
L + + YI +F+ L+ L YL+ N + L L+ L + N+L
Sbjct: 137 DLGELKRLEYISE--AAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSG-NRLDLI 193
Query: 296 IPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEEL 348
P L SL LWL Q++ + +L ++ L + N L S+P +L
Sbjct: 194 RPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM-SLPHDL 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Phosphopeptide
Length = 306
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 92/223 (41%), Gaps = 27/223 (12%)
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELD-------WSKRVNVIKGVA 886
++V+ G S Q +V E + G L + L + AE + + + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG--TCG 944
+ ++Y++ F +HRD++++ ++ ++ + DFG + + G
Sbjct: 141 DGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLI 1003
++APE D+++FGV++ E+ + P N ++ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----------YQGLSNEQVLKFVMD 247
Query: 1004 DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
L P E++ ++ +C NP+ RPT ++ NLL
Sbjct: 248 GGYLDQP-DNCPERVTDLMR---MCWQFNPNMRPTFLEIVNLL 286
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 785 GTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIGINQKGFVSEITEIRHRNIVKF-Y 839
G G G VY+A+L SG+ A+KK+ E+ I +K + H NIV+ Y
Sbjct: 63 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRLRY 114
Query: 840 GFCSHTQ-----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNV-IKGVANALSYMH 893
F S + +L LV +Y+ ++ + + + A + V + + + +L+Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 894 HDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAY 952
I HRDI + +LLD + + DFG+AK L N S + Y APEL +
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 229
Query: 953 -TMRANEKCDVFNFGVLVLEVIEGK 976
DV++ G ++ E++ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 184 NLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRL 243
N ++ L N I +LR L L L+KN + L +L L L DNRL
Sbjct: 36 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRL 95
Query: 244 SGYIPPKLGSFKSLLYLYLSHNQLNGSLPS-SFGNLSSLKHLHVHNINKL--------SG 294
+ L L+L +N + S+PS +F + SL+ L + + +L G
Sbjct: 96 TTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEG 154
Query: 295 SIP-----------KEIGNLKS---LSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENML 340
+ K+I NL + L L LS +L P S L+++R L++ +
Sbjct: 155 LVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 214
Query: 341 YGSIPEELGRLKSLSQLSLSVNKLNGSIPH 370
LKSL +L+LS N L S+PH
Sbjct: 215 ATIERNAFDDLKSLEELNLSHNNL-MSLPH 243
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQ--------------IGKLVQLSKLDL 623
NR+ L +LGEL++L + +S F ++++ + LV+L +L+L
Sbjct: 128 NRVPSLRRLDLGELKRLEY--ISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELEL 185
Query: 624 SHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682
S N L P L SL + L+ +++ + F + L +++S+N L S+PH
Sbjct: 186 SGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM-SLPH 243
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 97/244 (39%), Gaps = 27/244 (11%)
Query: 51 KHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNRLNG 110
++L+ N I L +L +L+LS N + + L SLN L L NRL
Sbjct: 38 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT- 96
Query: 111 SIPAXXXXXXXXXXXXXXXXXXXXXIPPNWGYLISPHYGSIPQ----DLGNLESPVSVSL 166
++P IP S + +P DLG L+ +S
Sbjct: 97 TVPTQAFEYLSKLRELWLRNNPIESIP-------SYAFNRVPSLRRLDLGELKRLEYIS- 148
Query: 167 HTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPT 226
+ GL NL ++ L + IP+ +R L L L+ N+L P +
Sbjct: 149 ---------EAAFEGLVNLRYLNLGMCNL-KDIPNLTALVR-LEELELSGNRLDLIRPGS 197
Query: 227 AGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSS-FGNLSSLKHLH 285
L++L+ L+L +++ KSL L LSHN L SLP F L L+ +H
Sbjct: 198 FQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL-MSLPHDLFTPLHRLERVH 256
Query: 286 V-HN 288
+ HN
Sbjct: 257 LNHN 260
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 103/274 (37%), Gaps = 42/274 (15%)
Query: 220 SGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLS 279
+G+ P A + SN + R +P + + YL L N + +F
Sbjct: 2 TGTSCPAACSCSNQASRVICTRRELAEVPASIPV--NTRYLNLQENSIQVIRTDTF---- 55
Query: 280 SLKHLHVHNINKLSGSIPKEI-----GNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLY 334
KHL I +LS ++ ++I L SL+ L L +L+ + LS +R L+
Sbjct: 56 --KHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELW 113
Query: 335 IRENMLYGSIPE-ELGRLKSLSQLSL-SVNKLNGSIPHCLGNLSNLKFFALRENELSGSI 392
+R N + SIP R+ SL +L L + +L L NL++ L L
Sbjct: 114 LRNNPI-ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL---- 168
Query: 393 PQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYS 452
++I N+ L + L + N P S Q TSL
Sbjct: 169 -KDIPNLTALVR---------------------LEELELSGNRLDLIRPGSFQGLTSLRK 206
Query: 453 LRLERNQLTGNISEVFGIYPDLELLDLSNNNFFG 486
L L Q+ F LE L+LS+NN
Sbjct: 207 LWLMHAQVATIERNAFDDLKSLEELNLSHNNLMS 240
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 582 KLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLES 641
K IP NL L +L L LS N+ L L KL L H + + +L+S
Sbjct: 169 KDIP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKS 227
Query: 642 LEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYN 674
LE +NL N L F +H L + +++N
Sbjct: 228 LEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 29.6 bits (65), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 7/173 (4%)
Query: 178 SLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGN-LSNLKFL 236
+ GL +L + L +NR+ L L L L N + SIP A N + +L+ L
Sbjct: 78 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRL 136
Query: 237 YLHDNRLSGYIPPKLGSFKSLLYL-YLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGS 295
L + + YI +F+ L+ L YL+ N + L L+ L + N+L
Sbjct: 137 DLGELKRLEYISE--AAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSG-NRLDLI 193
Query: 296 IPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEEL 348
P L SL LWL Q++ + +L ++ L + N L S+P +L
Sbjct: 194 RPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM-SLPHDL 245
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + D+G A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAK--FLKPDSSNWSELAGTCGYIAPELAYTMRANE 958
+HRD++++ +LL + DFG A+ + PD + ++APE + +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 959 KCDVFNFGVLVLEVI 973
K DV+++GVL+ E+
Sbjct: 281 KSDVWSYGVLLWEIF 295
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 16 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 70
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+ ++ + + + A
Sbjct: 71 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 121
Query: 872 ELDWSKRVNV-IKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFL 929
+ V + + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 122 QTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
Query: 930 KPDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 179 VRGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 20/125 (16%)
Query: 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE 915
ERG+L E A W V++ V + H+C +LHRDI + +L+DL
Sbjct: 150 ERGAL-----QEELARSFFW----QVLEAVRHC-----HNC--GVLHRDIKDENILIDLN 193
Query: 916 Y-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LAYTMRANEKCDVFNFGVLVLEVI 973
+ + DFG+ LK + +++ GT Y PE + Y V++ G+L+ +++
Sbjct: 194 RGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 974 EGKHP 978
G P
Sbjct: 252 CGDIP 256
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 141 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 139 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 130 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 49 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 103
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+ ++ + + + A
Sbjct: 104 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 154
Query: 872 ELDWSKRVNV-IKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFL 929
+ V + + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 155 QTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
Query: 930 KPDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 212 VRGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 762 GQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIG 817
GQ QE+ S + K++ G G G VY+A+L SG+ A+KK+ E+
Sbjct: 47 GQGPDRPQEV---SYTDTKVI--GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 101
Query: 818 INQKGFVSEITEIRHRNIVKF-YGFCSHTQ-----HLFLVYEYLERGSLATILSNEATAA 871
I +K + H NIV+ Y F S + +L LV +Y+ ++ + + + A
Sbjct: 102 IMRK--------LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 152
Query: 872 ELDWSKRVNV-IKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFL 929
+ V + + + +L+Y+H I HRDI + +LLD + + DFG+AK L
Sbjct: 153 QTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
Query: 930 KPDSSNWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGK 976
N S + Y APEL + DV++ G ++ E++ G+
Sbjct: 210 VRGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + +E
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 17/138 (12%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH-HDCFPPILHRDIS 906
L ++ E +E G L + + A + + +++ + A+ ++H H+ I HRD+
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLHSHN----IAHRDVK 136
Query: 907 SKKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKC 960
+ +L + K V +DFG AK + + L C Y+APE+ + ++ C
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 191
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ GV++ ++ G P
Sbjct: 192 DMWSLGVIMYILLCGFPP 209
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 17/138 (12%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH-HDCFPPILHRDIS 906
L ++ E +E G L + + A + + +++ + A+ ++H H+ I HRD+
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLHSHN----IAHRDVK 155
Query: 907 SKKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKC 960
+ +L + K V +DFG AK + + L C Y+APE+ + ++ C
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 210
Query: 961 DVFNFGVLVLEVIEGKHP 978
D+++ GV++ ++ G P
Sbjct: 211 DMWSLGVIMYILLCGFPP 228
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 785 GTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIGINQKGFVSEITEIRHRNIVKF-Y 839
G G G VY+A+L SG+ A+KK+ E+ I +K + H NIV+ Y
Sbjct: 57 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRLRY 108
Query: 840 GFCSHTQ-----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNV-IKGVANALSYMH 893
F S + +L LV +Y+ ++ + + + A + V + + + +L+Y+H
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 894 HDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAY 952
I HRDI + +LLD + + DFG+AK L N S + Y APEL +
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 223
Query: 953 -TMRANEKCDVFNFGVLVLEVIEGK 976
DV++ G ++ E++ G+
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 202
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 131 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 186
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 131 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 186
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 127 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 182
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 130 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 185
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 187
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 187
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 127 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 182
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 202
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 146 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 201
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 91/223 (40%), Gaps = 27/223 (12%)
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELD-------WSKRVNVIKGVA 886
++V+ G S Q +V E + G L + L + AE + + + + +A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG--TCG 944
+ ++Y++ F +HRD++++ ++ ++ + DFG + + G
Sbjct: 138 DGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLI 1003
++APE D+++FGV++ E+ + P N ++ +
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----------YQGLSNEQVLKFVMD 244
Query: 1004 DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
L P E++ ++ +C NP RPT ++ NLL
Sbjct: 245 GGYLDQP-DNCPERVTDLMR---MCWQFNPKMRPTFLEIVNLL 283
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With A Bisubstrate Inhibitor
Length = 306
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 91/223 (40%), Gaps = 27/223 (12%)
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELD-------WSKRVNVIKGVA 886
++V+ G S Q +V E + G L + L + AE + + + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG--TCG 944
+ ++Y++ F +HRD++++ ++ ++ + DFG + + G
Sbjct: 141 DGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLI 1003
++APE D+++FGV++ E+ + P N ++ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----------YQGLSNEQVLKFVMD 247
Query: 1004 DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
L P E++ ++ +C NP RPT ++ NLL
Sbjct: 248 GGYLDQP-DNCPERVTDLMR---MCWQFNPKMRPTFLEIVNLL 286
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 146 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 201
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 154 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 209
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 202
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 785 GTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIGINQKGFVSEITEIRHRNIVKF-Y 839
G G G VY+A+L SG+ A+KK+ E+ I +K + H NIV+ Y
Sbjct: 63 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRLRY 114
Query: 840 GFCSHTQ-----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNV-IKGVANALSYMH 893
F S + +L LV +Y+ ++ + + + A + V + + + +L+Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 894 HDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAY 952
I HRDI + +LLD + + DFG+AK L N S + Y APEL +
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 229
Query: 953 -TMRANEKCDVFNFGVLVLEVIEGK 976
DV++ G ++ E++ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 166 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 221
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL +G GTVYK + A+K+L + P I + +
Sbjct: 18 ILKETEFKKIKVL-SSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 77 V--MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 134 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI--TEIRHRNIVKFYGF 841
G+G G+V A + SG+ A+KKL EI ++ + + ++H N++
Sbjct: 51 GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 842 CSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ L Y+ YL + T L + E K ++ + L Y+H +
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDL-QKIMGMEFSEEKIQYLVYQMLKGLKYIHS---AGV 165
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANEK 959
+HRD+ + ++ + + + DFG A+ + + + T Y APE+ + M N+
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQT 222
Query: 960 CDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ GK
Sbjct: 223 VDIWSVGCIMAEMLTGK 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 174 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 229
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 174 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 229
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 187
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 30 DLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIP 89
DLS +++F + + SH + L+ L + N+ + I LT+L L L NQL +
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLKELALDTNQLKSVPD 340
Query: 90 EELGELTSLNELALSYNRLNGSIP 113
LTSL ++ L N + S P
Sbjct: 341 GIFDRLTSLQKIWLHTNPWDCSCP 364
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 48 SKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNR 107
S +K D S ++ ++ T+L L L+ N++N + LT L ELAL N+
Sbjct: 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLKELALDTNQ 334
Query: 108 LNGSIP 113
L S+P
Sbjct: 335 LK-SVP 339
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 8/197 (4%)
Query: 785 GTGGCGTVYKAELTSGDTR-AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS 843
G G G V A TR A+KK+ + + RH N++
Sbjct: 52 GEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILR 111
Query: 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHR 903
+ + Y+ + + T L + +L + + L Y+H +LHR
Sbjct: 112 ASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHS---ANVLHR 168
Query: 904 DISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAGTCGYIAPELAYTMRANEK- 959
D+ +L++ + DFG A+ P+ + +E T Y APE+ + K
Sbjct: 169 DLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKS 228
Query: 960 CDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ +
Sbjct: 229 IDIWSVGCILAEMLSNR 245
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human
Insulin Receptor
Length = 306
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELD-------WSKRVNVIKGVA 886
++V+ G S Q +V E + G L + L + AE + + + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---- 942
+ ++Y++ F +HRD++++ ++ ++ + DFG + + +++ G
Sbjct: 141 DGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLP 195
Query: 943 CGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVND 1001
++APE D+++FGV++ E+ + P N ++
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----------YQGLSNEQVLKFV 245
Query: 1002 LIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ L P E++ ++ +C NP RPT ++ NLL
Sbjct: 246 MDGGYLDQP-DNCPERVTDLMR---MCWQFNPKMRPTFLEIVNLL 286
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAP 948
L Y+H I+HRD+ V ++ + + + DFG A+ + + + T Y AP
Sbjct: 144 LKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VATRWYRAP 197
Query: 949 ELAYT-MRANEKCDVFNFGVLVLEVIEGK 976
E+ M N+ D+++ G ++ E+++GK
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 889 LSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAP 948
L Y+H I+HRD+ V ++ + + + DFG A+ + + + T Y AP
Sbjct: 144 LKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VATRWYRAP 197
Query: 949 ELAYT-MRANEKCDVFNFGVLVLEVIEGK 976
E+ M N+ D+++ G ++ E+++GK
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELD-------WSKRVNVIKGVA 886
++V+ G S Q +V E + G L + L + AE + + + + +A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---- 942
+ ++Y++ F +HRD++++ ++ ++ + DFG + + +++ G
Sbjct: 140 DGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLP 194
Query: 943 CGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVND 1001
++APE D+++FGV++ E+ + P N ++
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----------YQGLSNEQVLKFV 244
Query: 1002 LIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ L P E++ ++ +C NP RPT ++ NLL
Sbjct: 245 MDGGYLDQP-DNCPERVTDLMR---MCWQFNPKMRPTFLEIVNLL 285
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 179 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 234
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 894 HDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LA 951
H+C +LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
Y V++ G+L+ +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL +G GTVYK + A+K+L + P I + +
Sbjct: 18 ILKETEFKKIKVL-SSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 77 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 134 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
Query: 771 LLSASTFEGKMVLHGTGGCGTVYKAELTSGDTR-----AVKKLH--SLPTGEIGINQKGF 823
+L + F+ VL +G GTVYK + A+K+L + P I + +
Sbjct: 11 ILKETEFKKIKVL-SSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATIL----SNEATAAELDWSKRV 879
V + + + ++ + G C T + L+ + + G L + N + L+W ++
Sbjct: 70 V--MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 880 NVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939
A ++Y+ ++HRD++++ VL+ ++DFG AK L + +
Sbjct: 127 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 940 AGTC--GYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
G ++A E + DV+++GV V E++ G P
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + E
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELAG 941
+ L Y+H +LHRD+ +LL+ + DFG A+ PD + E
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 942 TCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGK 976
T Y APE+ + K D+++ G ++ E++ +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
S ++++ H+++V YG C LV E+++ GSL T L + W ++ V K
Sbjct: 63 ASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAK 120
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA--------HVSDFGTAKFLKPDSSN 935
+A A+ ++ + ++H ++ +K +LL E +SD G + + P
Sbjct: 121 QLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI- 176
Query: 936 WSELAGTCGYIAPELAYTMR-ANEKCDVFNFGVLVLEVIEG 975
L ++ PE + N D ++FG + E+ G
Sbjct: 177 ---LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 36/179 (20%)
Query: 825 SEITEIRHRNI---------VKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDW 875
SEI + H N V+ + H H+ +V+E L + I N LD
Sbjct: 60 SEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDH 119
Query: 876 SKRV--NVIKGV----ANALSYM-------------HHDCFPPILHRDISSKKVLLDLEY 916
+++ + K V +N L++ + + + P + RD ++ L++ +
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD---ERTLINPDI 176
Query: 917 KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEG 975
K V DFG+A + D + S L T Y APE+ + ++ CDV++ G +++E G
Sbjct: 177 K--VVDFGSATY---DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
++ ++ + H NI+K + LV E + GS + + LD + +
Sbjct: 80 IAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTC 943
+ +A+ Y+ I+HRDI + +++ ++ + DFG+A +L+ ++ GT
Sbjct: 138 QLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-FCGTI 193
Query: 944 GYIAPEL 950
Y APE+
Sbjct: 194 EYCAPEV 200
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 888 ALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIA 947
L Y+H I+HRD+ V ++ + + + DFG A+ + + + T Y A
Sbjct: 135 GLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY---VATRWYRA 188
Query: 948 PELAYT-MRANEKCDVFNFGVLVLEVIEGK 976
PE+ M N+ D+++ G ++ E+++GK
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 10/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V+ + + HRN+++ YG T + +V E GSL L L R V
Sbjct: 72 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 128
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELA 940
VA + Y+ F +HRD++++ +LL + DFG + L + +
Sbjct: 129 QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 185
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ APE T + D + FGV + E+ G+ P
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 10/159 (6%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
V+ + + HRN+++ YG T + +V E GSL L L R V
Sbjct: 62 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WSELA 940
VA + Y+ F +HRD++++ +LL + DFG + L + +
Sbjct: 119 QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
+ APE T + D + FGV + E+ G+ P
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 175 IPRSLGGLKNLTFVYLNNNRIVGSIPSE--IGNLRSLSYLGLNKNQLSGSIPPTAGNLSN 232
IPR + + T + LN+N + G I S+ G L L L L +NQL+G P S+
Sbjct: 23 IPRDIP--LHTTELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH 79
Query: 233 LKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKL 292
++ L L +N++ L L L NQ++ +P SF +L+SL L++
Sbjct: 80 IQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNL------ 133
Query: 293 SGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRE 337
S P + WL K L+G G S +R + I++
Sbjct: 134 -ASNPFNCNCHLAWFAEWLRKKSLNGGA-ARCGAPSKVRDVQIKD 176
Score = 37.4 bits (85), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 450 LYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSN-WIKCPQLATLNMGGNEI 508
L L L+RNQLTG F ++ L L N EIS+ ++ QL TLN+ N+I
Sbjct: 56 LVKLELKRNQLTGIEPNAFEGASHIQELQLGENK-IKEISNKMFLGLHQLKTLNLYDNQI 114
Query: 509 SGTIPSEIGNMTQLHKLDFSSN 530
S +P ++ L L+ +SN
Sbjct: 115 SCVMPGSFEHLNSLTSLNLASN 136
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 348 LGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALREN---ELSGSIPQEIENMKKLNK 404
GRL L +L L N+L G P+ S+++ L EN E+S + + +K LN
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN- 108
Query: 405 YLLFENQFTGYLPQNVCQSGSLTHFSVRNNNF 436
L++NQ + +P + SLT ++ +N F
Sbjct: 109 --LYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 236 LYLHDNRLSGYIPPK--LGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLS 293
L L+DN L G I G L+ L L NQL G P++F S ++ L + NK+
Sbjct: 34 LLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE-NKIK 91
Query: 294 GSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIREN 338
K L L L L Q+S +P S +L+++ L + N
Sbjct: 92 EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 68/302 (22%), Positives = 118/302 (39%), Gaps = 47/302 (15%)
Query: 759 SQEGQNDVNNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVK------KLHSLP 812
S+E QN + + + GK++ G G G+V + L D ++K KL +
Sbjct: 19 SEELQNKLEDVVIDRNLLILGKIL--GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS 76
Query: 813 TGEIGINQKGFVSE---ITEIRHRNIVKFYGFCSHTQHL-----FLVYEYLERGSLATIL 864
EI + F+SE + + H N+++ G C ++ +++ G L T L
Sbjct: 77 QREI----EEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132
Query: 865 ---SNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVS 921
E + + + +A + Y+ + F LHRD++++ +L + V+
Sbjct: 133 LYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNF---LHRDLAARNCMLRDDMTVCVA 189
Query: 922 DFG-TAKFLKPDSSNWSELAGT-CGYIAPELAYTMRANEKCDVFNFGVLVLEVIE---GK 976
DFG + K D +A +IA E K DV+ FGV + E+
Sbjct: 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
Query: 977 HPGHFXXXXXXXXXXXXNMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCR 1036
+PG N + L RL P E+ L + + + C +P R
Sbjct: 250 YPG------------VQNHEMYDYLLHGHRLKQP----EDCLDELYEIMYSCWRTDPLDR 293
Query: 1037 PT 1038
PT
Sbjct: 294 PT 295
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 785 GTGGCGTVYKAELT-SGDTRAVKKL---HSLPTGEIGINQKGFVSEITEIRHRNIVKF-Y 839
G G G VY+A+L SG+ A+KK+ E+ I +K + H NIV+ Y
Sbjct: 29 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK--------LDHCNIVRLRY 80
Query: 840 GFCSHTQ-----HLFLVYEYLERGSLATILSNEATAAELDWSKRVNV-IKGVANALSYMH 893
F S + +L LV +Y+ ++ + + + A + V + + + +L+Y+H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 894 HDCFPPILHRDISSKKVLLDLEYKA-HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAY 952
I HRDI + +LLD + + DFG+AK L N S + Y APEL +
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 953 -TMRANEKCDVFNFGVLVLEVIEGK 976
DV++ G ++ E++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 885 VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELA---- 940
+A A+ ++H ++HRD+ + ++ V DFG + D + L
Sbjct: 173 IAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 941 --------GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVI 973
GT Y++PE + + K D+F+ G+++ E++
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 92/223 (41%), Gaps = 27/223 (12%)
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELD-------WSKRVNVIKGVA 886
++V+ G S Q +V E + G L + L + AE + + + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG--TCG 944
+ ++Y++ F +HRD++++ ++ ++ + DFG + + + G
Sbjct: 141 DGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVNDLI 1003
++APE D+++FGV++ E+ + P N ++ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----------YQGLSNEQVLKFVMD 247
Query: 1004 DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
L P E++ ++ +C NP RPT ++ NLL
Sbjct: 248 GGYLDQP-DNCPERVTDLMR---MCWQFNPKMRPTFLEIVNLL 286
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V + ++ SG AVKKL S P I I+ K E+ ++H N++
Sbjct: 60 GSGAYGSVCSSYDVKSGLKIAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 117
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ L + YL + L+N +L +I + L Y+H
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 174
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + DFG A+ + + + T Y APE+ M N
Sbjct: 175 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNM 231
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 232 TVDIWSVGCIMAELLTGR 249
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 29/181 (16%)
Query: 812 PTGEIGINQKGFVSEITEIRHRNIVKFYG--FCSHTQHLFLVYEYLERGSLATILSNEAT 869
P GE + ++ + + +RH+N+++ + Q +++V EY G + S
Sbjct: 47 PNGEANVKKE--IQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP-- 102
Query: 870 AAELDWSKRVNVIKG------VANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDF 923
KR V + + + L Y+H I+H+DI +LL +S
Sbjct: 103 ------EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISAL 153
Query: 924 GTAKFLKP----DSSNWSELAGTCGYIAPELAYTMR--ANEKCDVFNFGVLVLEVIEGKH 977
G A+ L P D+ S+ G+ + PE+A + + K D+++ GV + + G +
Sbjct: 154 GVAEALHPFAADDTCRTSQ--GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLY 211
Query: 978 P 978
P
Sbjct: 212 P 212
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
S ++++ H+++V YG C LV E+++ GSL T L + W ++ V K
Sbjct: 63 ASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAK 120
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA--------HVSDFGTAKFLKPDSSN 935
+A A+ ++ + ++H ++ +K +LL E +SD G + + P
Sbjct: 121 QLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI- 176
Query: 936 WSELAGTCGYIAPELAYTMR-ANEKCDVFNFGVLVLEVIEG 975
L ++ PE + N D ++FG + E+ G
Sbjct: 177 ---LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 900 ILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPE-LAYTMRAN 957
+LHRDI + +L+DL + + DFG+ LK + +++ GT Y PE + Y
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 958 EKCDVFNFGVLVLEVIEGKHP 978
V++ G+L+ +++ G P
Sbjct: 189 RSAAVWSLGILLYDMVCGDIP 209
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 824 VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
VS + ++ H NI+ + + + L+ E + G L L+ + + +E + + IK
Sbjct: 66 VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIK 122
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA---HVS--DFGTAKFLKPDSSNWSE 938
+ + ++Y+H I H D+ + ++L L+ H+ DFG A ++ D +
Sbjct: 123 QILDGVNYLHT---KKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE-DGVEFKN 177
Query: 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
+ GT ++APE+ + D+++ GV+ ++ G P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRV--NVIKGVAN 887
++H +IV+ S L++V+E+++ L + A A + +S+ V + ++ +
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSEAVASHYMRQILE 143
Query: 888 ALSYMHHDCFPPILHRDISSKKVLL-DLEYKAHVS--DFGTAKFLKPDSSNWSELAGTCG 944
AL Y H + I+HRD+ VLL E A V FG A L GT
Sbjct: 144 ALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 200
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++APE+ + DV+ GV++ ++ G P
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISS 907
L +V E L+ G L + + + A + + + K + A+ Y+H I HRD+
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTE-REASEIXKSIGEAIQYLHS---INIAHRDVKP 189
Query: 908 KKVLLDLEYKAHV---SDFGTAKFLKPDSSNWSELAGTCG---YIAPELAYTMRANEKCD 961
+ +L + + +DFG AK ++++ + L C Y+APE+ + ++ CD
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
Query: 962 VFNFGVLVLEVIEGKHP 978
++ GV+ ++ G P
Sbjct: 246 XWSLGVIXYILLCGYPP 262
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI---TEIRHRNIVKFYG 840
G+G G+V A + +G AVKKL S P I I+ K E+ ++H N++
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 841 FCSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L + YL + L+N +L +I + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANE 958
I+HRD+ + ++ + + + FG A+ + + + T Y APE+ M N+
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQ 202
Query: 959 KCDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 835 IVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
++ + +T + L+ EY G + ++ E A + + + +IK + + Y+H
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 895 DCFPPILHRDISSKKVLLDLEY---KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELA 951
+ I+H D+ + +LL Y + DFG ++ + + E+ GT Y+APE+
Sbjct: 150 N---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-HACELREIMGTPEYLAPEIL 205
Query: 952 YTMRANEKCDVFNFGVLVLEVIEGKHP 978
D++N G++ ++ P
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 38.5 bits (88), Expect = 0.021, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELD-------WSKRVNVIKGVA 886
++V+ G S Q +V E + G L + L + AE + + + + +A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---- 942
+ ++Y++ F +HR+++++ ++ ++ + DFG + + +++ G
Sbjct: 142 DGMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLP 196
Query: 943 CGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVND 1001
++APE D+++FGV++ E+ + P N ++
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----------YQGLSNEQVLKFV 246
Query: 1002 LIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ L P E++ ++ +C NP+ RPT ++ NLL
Sbjct: 247 MDGGYLDQP-DNCPERVTDLMR---MCWQFNPNMRPTFLEIVNLL 287
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin
Receptor Tyrosine Kinase
Length = 306
Score = 38.5 bits (88), Expect = 0.022, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 834 NIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELD-------WSKRVNVIKGVA 886
++V+ G S Q +V E + G L + L + AE + + + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 887 NALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGT---- 942
+ ++Y++ F +HR+++++ ++ ++ + DFG + + +++ G
Sbjct: 141 DGMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLP 195
Query: 943 CGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFXXXXXXXXXXXXNMNIVVND 1001
++APE D+++FGV++ E+ + P N ++
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----------YQGLSNEQVLKFV 245
Query: 1002 LIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046
+ L P E++ ++ +C NP+ RPT ++ NLL
Sbjct: 246 MDGGYLDQP-DNCPERVTDLMR---MCWQFNPNMRPTFLEIVNLL 286
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 830 IRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRV--NVIKGVAN 887
++H +IV+ S L++V+E+++ L + A A + +S+ V + ++ +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSEAVASHYMRQILE 141
Query: 888 ALSYMHHDCFPPILHRDISSKKVLL-DLEYKAHVS--DFGTAKFLKPDSSNWSELAGTCG 944
AL Y H + I+HRD+ VLL E A V FG A L GT
Sbjct: 142 ALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 198
Query: 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978
++APE+ + DV+ GV++ ++ G P
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 30 DLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIP 89
DLS +++F + + SH + L+ L + N+ + I LT+L+ L LS N L +
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDS 340
Query: 90 EELGELTSLNELALSYNRLNG 110
L L L LSYN +
Sbjct: 341 RMFENLDKLEVLDLSYNHIRA 361
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 29 LDLSVNQLFGTIPTQI-SHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGL 87
L+LS N L G+I +++ +L KL+ LD S N + L NL L L NQL +
Sbjct: 328 LNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386
Query: 88 IPEELGELTSLNELALSYNRLNGSIP 113
LTSL ++ L N + S P
Sbjct: 387 PDGIFDRLTSLQKIWLHTNPWDCSCP 412
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 576 SANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSE 635
S +++ L+ L L L+ N+ ++ L L KL+LS N LG
Sbjct: 283 SKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRM 342
Query: 636 ICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIP 681
NL+ LE ++L N + F + L + + N+L+ S+P
Sbjct: 343 FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVP 387
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGF--VSEITEIRHRNIVKFYGF 841
G+G G V A + +G A+KKL+ E+ ++ + + + +RH N++
Sbjct: 34 GSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-FAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 842 CSHTQHL--FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP 899
+ + L F + YL + T L +L + ++ + L Y+H
Sbjct: 93 FTPDETLDDFTDF-YLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA---AG 148
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG---TCGYIAPELAYT-MR 955
I+HRD+ + ++ + + + DFG A+ + D SE+ G T Y APE+ MR
Sbjct: 149 IIHRDLKPGNLAVNEDCELKILDFGLAR--QAD----SEMXGXVVTRWYRAPEVILNWMR 202
Query: 956 ANEKCDVFNFGVLVLEVIEGK 976
+ D+++ G ++ E+I GK
Sbjct: 203 YTQTVDIWSVGCIMAEMITGK 223
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Query: 170 NFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEI-GNLRSLSYLGLNKNQLSGSIPPTAG 228
N G+ G + T + L +N++ S+P + L L+ L L++NQ+
Sbjct: 15 NSKGLTSVPTGIPSSATRLELESNKL-QSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFD 73
Query: 229 NLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHN 288
L+ L LYLH+N+L L L L NQL F L+SL+ + +H
Sbjct: 74 KLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 133
Query: 289 INKLSGSIPK 298
N S P+
Sbjct: 134 -NPWDCSCPR 142
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 29 LDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLI 88
L+L N+L L++L L S NQ + LT L +L L N+L L
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLP 92
Query: 89 PEELGELTSLNELALSYNRLNGSIP 113
+LT L ELAL N+L S+P
Sbjct: 93 NGVFDKLTQLKELALDTNQLK-SVP 116
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 162 VSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEI-GNLRSLSYLGLNKNQLS 220
+SL N + L LT +YL+ N++ S+P+ + L L L L+ NQL
Sbjct: 55 TKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL-QSLPNGVFDKLTQLKELALDTNQLK 113
Query: 221 GSIPPTAGNLSNLKFLYLHDNRLSGYIP 248
L++L+ ++LH N P
Sbjct: 114 SVPDGIFDRLTSLQKIWLHTNPWDCSCP 141
Score = 29.6 bits (65), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 290 NKLSGSIPKEI-GNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEEL 348
NKL S+P + L L+ L LS+ Q+ L+ + LY+ EN L S+P +
Sbjct: 38 NKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ-SLPNGV 95
Query: 349 -GRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQ 394
+L L +L+L N+L L++L+ L N S P+
Sbjct: 96 FDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 785 GTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEI--TEIRHRNIVKFYGF 841
G+G G+V A + SG+ A+KKL EI ++ + + ++H N++
Sbjct: 33 GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 842 CSHTQHLFLVYE-YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPI 900
+ L Y+ YL + T L + + K ++ + L Y+H +
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDL-QKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AGV 147
Query: 901 LHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANEK 959
+HRD+ + ++ + + + DFG A+ + + + T Y APE+ + M N+
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQT 204
Query: 960 CDVFNFGVLVLEVIEGK 976
D+++ G ++ E++ GK
Sbjct: 205 VDIWSVGCIMAEMLTGK 221
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 139/361 (38%), Gaps = 58/361 (16%)
Query: 190 LNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPP 249
L+NNRI S++ +L L L N ++ + +L +L+ L L N LS
Sbjct: 33 LSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSS 92
Query: 250 KLGSFKSLLYLYLSHNQLNGSLPSS-FGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSH 308
SL +L L N +S F +L+ L+ L V N++ + K+ L L
Sbjct: 93 WFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEE 152
Query: 309 LWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSI 368
L + + L + P SL ++ N+ L + + + + L+ ++ SV
Sbjct: 153 LEIDASDLQSYEPKSLKSIQNVSHLILH-------MKQHILLLEIFVDVTSSV------- 198
Query: 369 PHCL----GNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFE-----NQFTGYLPQN 419
CL +L F L E + I + K+ LF+ NQ +G L
Sbjct: 199 -ECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELE 257
Query: 420 V--CQSGSLTHFSVRNNN-FVGP------------IPRS--LQNCTSLYSLRLERNQLTG 462
C + +F +N+ + P IPR + ++LYSL ++T
Sbjct: 258 FDDCTLNGVGNFRASDNDRVIDPGKVETLTIRRLHIPRFYLFYDLSTLYSLTERVKRITV 317
Query: 463 NISEVFGI-------YPDLELLDLSNNNFFGEISSN------WIKCPQLATLNMGGNEIS 509
S+VF + LE LDLS N E N W P L TL + N ++
Sbjct: 318 ENSKVFLVPCLLSQHLKSLEYLDLSENLMVEEYLKNSACEDAW---PSLQTLILRQNHLA 374
Query: 510 G 510
Sbjct: 375 S 375
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 49 KLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNRL 108
+LK L S N+ + P +L L+VL++S NQL + LTSL ++ L N
Sbjct: 452 QLKELYISRNKLMTL--PDASLLPMLLVLKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
Query: 109 NGSIP 113
+ S P
Sbjct: 510 DCSCP 514
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 920 VSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEG 975
V DFG+A F D + S + T Y APE+ + ++ CDV++ G ++ E G
Sbjct: 197 VVDFGSATF---DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 83/211 (39%), Gaps = 16/211 (7%)
Query: 774 ASTFEGKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRH 832
+S F+ K +L G G G V A +G+ A+KK+ + + + +H
Sbjct: 10 SSDFQLKSLL-GEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYM 892
NI+ + Y+ + + T L + L I A+ +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG----------T 942
H ++HRD+ +L++ V DFG A+ + +++ SE G T
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 943 CGYIAPELAYT-MRANEKCDVFNFGVLVLEV 972
Y APE+ T + + DV++ G ++ E+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.0 bits (84), Expect = 0.060, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 37/233 (15%)
Query: 766 VNNQEL-LSASTFEGKMVLHGTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGF 823
+ NQ + A E M L G G G V K + SG AVK++ + + QK
Sbjct: 41 IGNQNFEVKADDLEPIMEL-GRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ---EQKRL 96
Query: 824 VSEITEIRHRNI-----VKFYGFCSHTQHLFLVYEY----LERGSLATILSNEATAAELD 874
+ ++ +I R + V FYG +++ E L++ I + ++
Sbjct: 97 LMDL-DISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDIL 155
Query: 875 WSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934
V+++K AL ++H ++HRD+ VL++ + + DFG + +L DS
Sbjct: 156 GKIAVSIVK----ALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSV 208
Query: 935 NWSELAGTCGYIAPELAYTMRANE---------KCDVFNFGVLVLEVIEGKHP 978
+ AG Y+APE R N K D+++ G+ ++E+ + P
Sbjct: 209 AKTIDAGCKPYMAPE-----RINPELNQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 37.0 bits (84), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 83/211 (39%), Gaps = 16/211 (7%)
Query: 774 ASTFEGKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRH 832
+S F+ K +L G G G V A +G+ A+KK+ + + + +H
Sbjct: 10 SSDFQLKSLL-GEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYM 892
NI+ + Y+ + + T L + L I A+ +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG----------T 942
H ++HRD+ +L++ V DFG A+ + +++ SE G T
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 943 CGYIAPELAYT-MRANEKCDVFNFGVLVLEV 972
Y APE+ T + + DV++ G ++ E+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 83/211 (39%), Gaps = 16/211 (7%)
Query: 774 ASTFEGKMVLHGTGGCGTVYKA-ELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRH 832
+S F+ K +L G G G V A +G+ A+KK+ + + + +H
Sbjct: 10 SSDFQLKSLL-GEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 833 RNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYM 892
NI+ + Y+ + + T L + L I A+ +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 893 HHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG----------T 942
H ++HRD+ +L++ V DFG A+ + +++ SE G T
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 943 CGYIAPELAYT-MRANEKCDVFNFGVLVLEV 972
Y APE+ T + + DV++ G ++ E+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.6 bits (83), Expect = 0.066, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 35/213 (16%)
Query: 785 GTGGCGTVYKAE-LTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNI-----VKF 838
G G G V K + SG AVK++ + + QK + ++ +I R + V F
Sbjct: 16 GRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ---EQKRLLMDL-DISMRTVDCPFTVTF 71
Query: 839 YGFCSHTQHLFLVYEY----LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH 894
YG +++ E L++ I + ++ V+++K AL ++H
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK----ALEHLHS 127
Query: 895 DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM 954
++HRD+ VL++ + + DFG + +L D + + AG Y+APE
Sbjct: 128 KL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYMAPE----- 179
Query: 955 RANE---------KCDVFNFGVLVLEVIEGKHP 978
R N K D+++ G+ ++E+ + P
Sbjct: 180 RINPELNQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 36.6 bits (83), Expect = 0.075, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 36/179 (20%)
Query: 825 SEITEIRHRNI---------VKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDW 875
SEI + H N V+ + H H+ +V+E L + I N LD
Sbjct: 60 SEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDH 119
Query: 876 SKRV--NVIKGV----ANALSYM-------------HHDCFPPILHRDISSKKVLLDLEY 916
+++ + K V +N L++ + + + P + RD ++ L++ +
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD---ERTLINPDI 176
Query: 917 KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEG 975
K V DFG+A + D + S L Y APE+ + ++ CDV++ G +++E G
Sbjct: 177 K--VVDFGSATY---DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 830 IRHRNIVKFYGFCS------HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIK 883
+ H+NI+ + Q +++V E ++ +L+ ++ ELD + ++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLY 133
Query: 884 GVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTC 943
+ + ++H I+HRD+ +++ + + DFG A+ S + T
Sbjct: 134 QMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTR 189
Query: 944 GYIAPELAYTMRANEKCDVFNFGVLVLEVIEG 975
Y APE+ M E D+++ GV++ E+I+G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 900 ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEK 959
I+HRD+ +++ + + DFG A+ S + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 960 CDVFNFGVLVLEVIEG 975
D+++ GV++ E+I+G
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 36.2 bits (82), Expect = 0.093, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 819 NQKGFVSE---ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDW 875
N++ F+SE + + H +IVK G + +++ E G L L E L
Sbjct: 68 NKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYL--ERNKNSLKV 124
Query: 876 SKRVNVIKGVANALSYMHH-DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK-PDS 933
V + A++Y+ +C +HRDI+ + +L+ + DFG +++++ D
Sbjct: 125 LTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 180
Query: 934 SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
S +++PE R DV+ F V + E++ GK P
Sbjct: 181 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 36.2 bits (82), Expect = 0.093, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 819 NQKGFVSE---ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDW 875
N++ F+SE + + H +IVK G + +++ E G L L E L
Sbjct: 52 NKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYL--ERNKNSLKV 108
Query: 876 SKRVNVIKGVANALSYMHH-DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK-PDS 933
V + A++Y+ +C +HRDI+ + +L+ + DFG +++++ D
Sbjct: 109 LTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 164
Query: 934 SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
S +++PE R DV+ F V + E++ GK P
Sbjct: 165 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 36.2 bits (82), Expect = 0.093, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 819 NQKGFVSE---ITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDW 875
N++ F+SE + + H +IVK G + +++ E G L L E L
Sbjct: 56 NKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYL--ERNKNSLKV 112
Query: 876 SKRVNVIKGVANALSYMHH-DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK-PDS 933
V + A++Y+ +C +HRDI+ + +L+ + DFG +++++ D
Sbjct: 113 LTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168
Query: 934 SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHP 978
S +++PE R DV+ F V + E++ GK P
Sbjct: 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 36.2 bits (82), Expect = 0.094, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 902 HRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS-SNWSELAGTCGYIAPELAYTMRANEKC 960
HRD+ + +L+ + A++ DFG A + + GT Y APE A +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 961 DVFNFGVLVLEVIEGKHP 978
D++ ++ E + G P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,295,641
Number of Sequences: 62578
Number of extensions: 1122737
Number of successful extensions: 5749
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 598
Number of HSP's that attempted gapping in prelim test: 2750
Number of HSP's gapped (non-prelim): 2081
length of query: 1048
length of database: 14,973,337
effective HSP length: 109
effective length of query: 939
effective length of database: 8,152,335
effective search space: 7655042565
effective search space used: 7655042565
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)