Query 045493
Match_columns 1048
No_of_seqs 877 out of 6815
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 04:02:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045493.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045493hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.6E-80 1.2E-84 771.7 43.1 668 24-712 50-750 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.7E-75 9.1E-80 727.8 35.7 656 1-679 52-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 3.1E-64 1.1E-68 623.1 40.5 591 28-682 8-627 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 2.4E-63 8.2E-68 615.2 40.6 589 3-657 8-626 (680)
5 3t6q_A CD180 antigen; protein- 100.0 1.4E-57 4.8E-62 555.8 38.7 533 15-682 24-565 (606)
6 3t6q_A CD180 antigen; protein- 100.0 1.4E-57 4.7E-62 556.0 35.7 518 1-630 35-561 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-56 4.6E-61 565.0 40.9 535 3-682 8-565 (844)
8 3vq2_A TLR4, TOLL-like recepto 100.0 3.5E-56 1.2E-60 543.5 33.7 530 15-682 23-563 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 3.4E-55 1.2E-59 534.8 33.6 510 160-704 33-562 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 1.6E-52 5.4E-57 527.9 36.8 514 150-703 18-563 (844)
11 2z63_A TOLL-like receptor 4, v 100.0 1.1E-50 3.7E-55 491.6 32.4 506 3-606 11-532 (570)
12 2z63_A TOLL-like receptor 4, v 100.0 6.9E-50 2.4E-54 484.5 36.2 490 160-683 29-537 (570)
13 4gt4_A Tyrosine-protein kinase 100.0 2.5E-50 8.7E-55 439.8 19.7 249 782-1047 32-302 (308)
14 2z81_A CD282 antigen, TOLL-lik 100.0 4.1E-49 1.4E-53 475.1 26.6 472 159-683 26-516 (549)
15 2z81_A CD282 antigen, TOLL-lik 100.0 2.1E-48 7.3E-53 468.9 31.3 482 14-582 16-511 (549)
16 4asz_A BDNF/NT-3 growth factor 100.0 7E-50 2.4E-54 434.4 16.5 248 782-1047 19-285 (299)
17 4g8a_A TOLL-like receptor 4; l 100.0 4.7E-48 1.6E-52 475.2 34.9 533 14-681 42-584 (635)
18 4fih_A Serine/threonine-protei 100.0 3.5E-49 1.2E-53 433.3 21.7 247 778-1044 76-323 (346)
19 3omv_A RAF proto-oncogene seri 100.0 2.9E-49 9.9E-54 429.0 19.4 249 781-1047 41-296 (307)
20 4aoj_A High affinity nerve gro 100.0 5.1E-49 1.7E-53 433.8 21.5 248 782-1047 47-315 (329)
21 4b9d_A Serine/threonine-protei 100.0 3.6E-49 1.2E-53 434.0 17.6 248 779-1044 27-276 (350)
22 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-48 3.9E-53 428.1 18.2 244 780-1047 62-312 (336)
23 3fpq_A Serine/threonine-protei 100.0 2.2E-48 7.5E-53 419.0 19.7 244 782-1044 32-282 (290)
24 4fie_A Serine/threonine-protei 100.0 4.4E-48 1.5E-52 435.1 21.9 248 777-1044 152-400 (423)
25 4eco_A Uncharacterized protein 100.0 6.4E-48 2.2E-52 469.6 24.6 463 183-678 81-601 (636)
26 4eco_A Uncharacterized protein 100.0 2.4E-48 8.4E-53 473.3 19.6 487 25-583 82-602 (636)
27 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.7E-48 5.8E-53 421.3 15.8 243 780-1043 36-283 (311)
28 3hmm_A TGF-beta receptor type- 100.0 2.6E-48 8.8E-53 425.7 17.1 260 782-1048 9-294 (303)
29 3hyh_A Carbon catabolite-derep 100.0 3.7E-47 1.3E-51 405.6 20.8 242 780-1044 17-262 (275)
30 3ubd_A Ribosomal protein S6 ki 100.0 7.8E-48 2.7E-52 416.6 15.2 245 779-1044 27-281 (304)
31 4ase_A Vascular endothelial gr 100.0 1.7E-47 5.9E-52 424.8 18.1 251 781-1047 69-343 (353)
32 2z7x_B TOLL-like receptor 1, v 100.0 3.4E-46 1.2E-50 446.3 28.2 465 27-606 3-482 (520)
33 4ecn_A Leucine-rich repeat pro 100.0 1.2E-46 4.2E-51 464.2 23.6 353 314-676 475-863 (876)
34 4g31_A Eukaryotic translation 100.0 1.7E-46 5.7E-51 408.8 20.7 246 780-1044 9-279 (299)
35 2z7x_B TOLL-like receptor 1, v 100.0 4.7E-46 1.6E-50 445.0 25.0 458 123-657 3-485 (520)
36 4ecn_A Leucine-rich repeat pro 100.0 3.4E-46 1.2E-50 460.3 21.1 457 160-628 324-863 (876)
37 4g8a_A TOLL-like receptor 4; l 100.0 2.9E-43 1E-47 432.5 36.9 519 150-703 45-583 (635)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.4E-44 1.9E-48 430.6 23.8 444 159-683 52-516 (562)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.1E-43 3.7E-48 428.0 26.1 464 23-583 30-512 (562)
40 4b99_A Mitogen-activated prote 100.0 4.8E-43 1.6E-47 396.3 20.1 259 779-1044 57-344 (398)
41 4f9c_A Cell division cycle 7-r 100.0 8.2E-43 2.8E-47 390.4 20.6 193 776-980 21-248 (361)
42 3v5w_A G-protein coupled recep 100.0 1.3E-42 4.3E-47 407.4 19.1 245 780-1044 193-449 (689)
43 3uto_A Twitchin; kinase, muscl 100.0 9.9E-42 3.4E-46 405.3 20.2 247 780-1044 161-410 (573)
44 3v47_A TOLL-like receptor 5B a 100.0 2.3E-40 7.8E-45 388.9 25.5 367 304-684 30-415 (455)
45 3v47_A TOLL-like receptor 5B a 100.0 2.2E-40 7.4E-45 389.1 24.1 379 4-441 15-412 (455)
46 3uim_A Brassinosteroid insensi 100.0 2.9E-40 9.9E-45 369.6 22.4 280 767-1048 21-308 (326)
47 1jl5_A Outer protein YOPM; leu 100.0 6.6E-40 2.3E-44 381.2 24.6 390 230-683 10-417 (454)
48 3zgw_A Maternal embryonic leuc 100.0 5.6E-40 1.9E-44 367.3 21.0 246 778-1044 12-260 (347)
49 1jl5_A Outer protein YOPM; leu 100.0 1.3E-39 4.6E-44 378.6 24.1 422 47-611 10-435 (454)
50 3fxz_A Serine/threonine-protei 100.0 9.3E-40 3.2E-44 359.5 21.4 247 778-1044 22-269 (297)
51 3p86_A Serine/threonine-protei 100.0 6.3E-40 2.1E-44 362.7 17.9 248 781-1047 42-294 (309)
52 2qkw_B Protein kinase; three-h 100.0 1.9E-39 6.4E-44 362.0 21.6 268 774-1047 37-311 (321)
53 2yab_A Death-associated protei 100.0 3.4E-39 1.2E-43 363.4 23.7 249 778-1044 14-272 (361)
54 2psq_A Fibroblast growth facto 100.0 2.4E-39 8.1E-44 367.4 21.4 252 780-1048 85-361 (370)
55 1o6l_A RAC-beta serine/threoni 100.0 2.8E-39 9.7E-44 360.7 21.0 245 780-1045 9-261 (337)
56 3fe3_A MAP/microtubule affinit 100.0 2.3E-39 7.8E-44 360.5 19.7 244 779-1044 18-264 (328)
57 3kn6_A Ribosomal protein S6 ki 100.0 2E-39 6.8E-44 361.5 18.2 251 780-1044 15-270 (325)
58 3soc_A Activin receptor type-2 100.0 1.3E-39 4.3E-44 363.1 16.5 263 779-1048 27-315 (322)
59 3soa_A Calcium/calmodulin-depe 100.0 6.4E-39 2.2E-43 370.6 22.4 249 780-1045 15-268 (444)
60 2nru_A Interleukin-1 receptor- 100.0 6.1E-39 2.1E-43 355.6 21.3 275 766-1048 15-303 (307)
61 2c30_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43 356.0 22.1 246 779-1044 48-294 (321)
62 4dc2_A Protein kinase C IOTA t 100.0 1.3E-38 4.6E-43 361.4 23.5 248 780-1039 56-307 (396)
63 3c0i_A Peripheral plasma membr 100.0 1E-38 3.5E-43 359.9 21.9 250 780-1044 28-286 (351)
64 1tki_A Titin; serine kinase, m 100.0 6.7E-39 2.3E-43 356.3 20.0 247 780-1045 9-258 (321)
65 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.1E-39 7.3E-44 364.1 16.1 244 780-1044 27-280 (353)
66 2y0a_A Death-associated protei 100.0 1.3E-38 4.3E-43 355.4 22.0 250 778-1045 13-272 (326)
67 4euu_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 353.2 23.7 256 780-1046 13-304 (319)
68 3qd2_B Eukaryotic translation 100.0 1.6E-38 5.5E-43 356.6 22.6 247 780-1045 10-326 (332)
69 3s95_A LIMK-1, LIM domain kina 100.0 3.4E-38 1.2E-42 350.0 24.9 249 781-1047 15-278 (310)
70 3kul_A Ephrin type-A receptor 100.0 7.8E-39 2.7E-43 356.9 19.3 248 781-1047 54-309 (325)
71 2bdw_A Hypothetical protein K1 100.0 1.1E-38 3.9E-43 360.4 20.3 248 780-1045 33-285 (362)
72 4eqm_A Protein kinase; transfe 100.0 1E-38 3.6E-43 350.8 19.3 252 780-1048 15-272 (294)
73 3cbl_A C-FES, proto-oncogene t 100.0 7.5E-39 2.6E-43 364.7 18.1 248 781-1047 119-370 (377)
74 3niz_A Rhodanese family protei 100.0 3.1E-38 1.1E-42 349.9 22.5 259 780-1044 25-300 (311)
75 1xjd_A Protein kinase C, theta 100.0 6.2E-39 2.1E-43 358.8 16.5 243 780-1043 21-268 (345)
76 2qol_A Ephrin receptor; recept 100.0 7.8E-39 2.7E-43 363.3 17.4 249 780-1047 49-305 (373)
77 3tki_A Serine/threonine-protei 100.0 1.3E-38 4.6E-43 354.5 18.7 247 780-1044 11-261 (323)
78 2izr_A Casein kinase I isoform 100.0 2.5E-38 8.5E-43 354.3 20.3 251 780-1047 13-277 (330)
79 4hcu_A Tyrosine-protein kinase 100.0 2.4E-38 8.2E-43 343.5 19.4 247 781-1048 15-263 (269)
80 2w4o_A Calcium/calmodulin-depe 100.0 2.5E-38 8.5E-43 356.2 20.2 248 778-1045 55-306 (349)
81 2qr7_A Ribosomal protein S6 ki 100.0 1.8E-38 6.1E-43 355.5 18.8 246 780-1044 26-277 (342)
82 3sxs_A Cytoplasmic tyrosine-pr 100.0 4E-38 1.4E-42 341.6 20.7 248 780-1048 12-261 (268)
83 2i0e_A Protein kinase C-beta I 100.0 1.8E-38 6.1E-43 356.3 18.4 244 780-1044 24-276 (353)
84 3q4u_A Activin receptor type-1 100.0 2.5E-38 8.5E-43 349.7 19.2 253 780-1048 12-299 (301)
85 2pmi_A Negative RE, cyclin-dep 100.0 8.7E-38 3E-42 347.4 23.7 262 779-1044 8-293 (317)
86 3a8x_A Protein kinase C IOTA t 100.0 4.7E-38 1.6E-42 352.6 21.4 248 780-1039 13-264 (345)
87 3l9p_A Anaplastic lymphoma kin 100.0 2E-38 6.8E-43 359.6 18.1 251 780-1047 75-341 (367)
88 3a62_A Ribosomal protein S6 ki 100.0 3.9E-38 1.3E-42 351.5 20.2 245 779-1044 20-276 (327)
89 3tt0_A Basic fibroblast growth 100.0 3.8E-38 1.3E-42 359.8 20.5 251 781-1048 74-349 (382)
90 1luf_A Muscle-specific tyrosin 100.0 1.9E-38 6.4E-43 357.8 17.4 253 779-1048 50-332 (343)
91 2r5t_A Serine/threonine-protei 100.0 3E-38 1E-42 357.0 18.9 241 780-1041 42-286 (373)
92 3kex_A Receptor tyrosine-prote 100.0 4.9E-38 1.7E-42 351.0 20.4 248 780-1047 17-272 (325)
93 3v8s_A RHO-associated protein 100.0 8.6E-39 2.9E-43 365.2 14.4 246 778-1045 71-330 (410)
94 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.3E-38 8E-43 352.8 17.5 242 780-1044 13-258 (336)
95 1fot_A TPK1 delta, CAMP-depend 100.0 5.1E-38 1.7E-42 348.1 20.1 241 780-1044 10-258 (318)
96 3vhe_A Vascular endothelial gr 100.0 1.5E-38 5.2E-43 360.9 16.2 254 778-1047 24-351 (359)
97 1nxk_A MAP kinase-activated pr 100.0 6.3E-38 2.1E-42 359.1 20.8 246 782-1045 68-322 (400)
98 3o0g_A Cell division protein k 100.0 5.7E-38 1.9E-42 345.0 19.5 257 780-1044 6-282 (292)
99 4fr4_A YANK1, serine/threonine 100.0 6.3E-38 2.2E-42 354.7 20.3 246 780-1044 19-271 (384)
100 1ob3_A PFPK5, cell division co 100.0 7.1E-38 2.4E-42 343.4 19.8 260 780-1045 6-281 (288)
101 2ivs_A Proto-oncogene tyrosine 100.0 5.5E-38 1.9E-42 349.2 19.1 252 780-1048 27-308 (314)
102 3poz_A Epidermal growth factor 100.0 5.5E-38 1.9E-42 350.7 19.1 248 780-1047 19-274 (327)
103 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.4E-38 2.2E-42 352.0 19.6 241 780-1044 45-293 (350)
104 2zv2_A Calcium/calmodulin-depe 100.0 7E-38 2.4E-42 345.4 19.6 245 780-1044 17-292 (298)
105 3lb7_A RAF proto-oncogene seri 100.0 1E-37 3.6E-42 344.7 20.7 249 781-1047 41-296 (307)
106 2a2a_A Death-associated protei 100.0 2.2E-37 7.7E-42 345.0 23.2 249 779-1045 15-273 (321)
107 1kob_A Twitchin; kinase, intra 100.0 1E-37 3.5E-42 354.5 20.6 250 778-1045 53-305 (387)
108 4ejn_A RAC-alpha serine/threon 100.0 4.4E-38 1.5E-42 367.0 17.8 244 780-1044 152-404 (446)
109 1csn_A Casein kinase-1; phosph 100.0 1.3E-37 4.5E-42 343.4 20.6 251 780-1047 14-279 (298)
110 3gen_A Tyrosine-protein kinase 100.0 9.9E-38 3.4E-42 341.5 19.4 246 781-1047 29-276 (283)
111 1rjb_A FL cytokine receptor; k 100.0 1E-37 3.6E-42 351.7 19.9 252 780-1047 49-330 (344)
112 2x4f_A Myosin light chain kina 100.0 1.3E-37 4.3E-42 353.1 20.6 246 781-1044 94-342 (373)
113 1p4o_A Insulin-like growth fac 100.0 7.2E-38 2.5E-42 349.5 18.2 254 778-1048 27-296 (322)
114 3hko_A Calcium/calmodulin-depe 100.0 1.1E-37 3.6E-42 351.9 19.6 259 773-1045 23-331 (345)
115 3dtc_A Mitogen-activated prote 100.0 8.9E-38 3.1E-42 339.5 18.3 249 780-1048 11-270 (271)
116 3p1a_A MYT1 kinase, membrane-a 100.0 2.1E-37 7.1E-42 343.4 21.6 243 779-1045 60-305 (311)
117 1qcf_A Haematopoetic cell kina 100.0 8.5E-38 2.9E-42 364.9 19.1 248 780-1048 192-441 (454)
118 3mtl_A Cell division protein k 100.0 6.8E-38 2.3E-42 349.4 17.4 259 780-1044 6-281 (324)
119 3ugc_A Tyrosine-protein kinase 100.0 5.5E-38 1.9E-42 345.7 16.3 260 780-1048 14-288 (295)
120 4aw2_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 363.2 15.0 248 778-1044 76-338 (437)
121 3kk8_A Calcium/calmodulin depe 100.0 2.2E-37 7.6E-42 338.9 20.5 247 780-1044 10-261 (284)
122 1t46_A HOMO sapiens V-KIT hard 100.0 1.5E-37 5.3E-42 345.5 19.5 253 780-1048 27-304 (313)
123 1mp8_A Focal adhesion kinase 1 100.0 1E-37 3.5E-42 340.8 17.7 248 780-1047 19-272 (281)
124 3uc3_A Serine/threonine-protei 100.0 2.1E-37 7.1E-42 350.2 20.7 250 778-1045 22-275 (361)
125 3qup_A Tyrosine-protein kinase 100.0 1.3E-37 4.3E-42 347.7 18.7 253 778-1047 25-294 (323)
126 1k9a_A Carboxyl-terminal SRC k 100.0 3.3E-37 1.1E-41 359.3 22.9 242 781-1047 198-441 (450)
127 1o6v_A Internalin A; bacterial 100.0 2.6E-36 8.9E-41 354.5 30.7 347 302-679 44-390 (466)
128 4eut_A Serine/threonine-protei 100.0 1.3E-37 4.3E-42 357.1 18.9 257 780-1047 13-305 (396)
129 3dls_A PAS domain-containing s 100.0 3E-37 1E-41 345.3 21.4 238 780-1045 28-275 (335)
130 4e5w_A Tyrosine-protein kinase 100.0 1E-37 3.6E-42 344.8 17.6 261 779-1047 24-298 (302)
131 2pvf_A Fibroblast growth facto 100.0 1.7E-37 5.9E-42 348.1 19.5 252 780-1048 39-315 (334)
132 2id5_A Lingo-1, leucine rich r 100.0 3.3E-37 1.1E-41 364.0 22.7 346 331-703 14-359 (477)
133 3bz5_A Internalin-J, INLJ; leu 100.0 7.3E-37 2.5E-41 355.8 25.1 363 36-514 30-392 (457)
134 3op5_A Serine/threonine-protei 100.0 9.1E-38 3.1E-42 354.5 17.1 258 779-1047 38-325 (364)
135 2y94_A 5'-AMP-activated protei 100.0 2.2E-37 7.7E-42 359.8 20.6 243 780-1044 20-266 (476)
136 2id5_A Lingo-1, leucine rich r 100.0 4.1E-37 1.4E-41 363.2 23.2 320 3-390 15-334 (477)
137 2eva_A TAK1 kinase - TAB1 chim 100.0 1.5E-37 5.3E-42 343.7 18.3 246 781-1047 13-259 (307)
138 2ac3_A MAP kinase-interacting 100.0 2.2E-37 7.4E-42 344.7 19.6 257 782-1045 19-296 (316)
139 4f0f_A Serine/threonine-protei 100.0 5.1E-37 1.7E-41 336.6 22.2 248 780-1048 23-286 (287)
140 2i1m_A Macrophage colony-stimu 100.0 1.3E-37 4.5E-42 349.2 17.9 252 780-1047 50-322 (333)
141 3mdy_A Bone morphogenetic prot 100.0 4.1E-37 1.4E-41 346.0 21.8 263 779-1048 40-328 (337)
142 3bz5_A Internalin-J, INLJ; leu 100.0 1E-36 3.5E-41 354.7 25.7 360 175-635 34-393 (457)
143 1opk_A P150, C-ABL, proto-onco 100.0 2.5E-37 8.5E-42 364.3 20.8 248 781-1048 225-475 (495)
144 3g2f_A Bone morphogenetic prot 100.0 4.9E-38 1.7E-42 353.2 14.1 261 780-1047 17-314 (336)
145 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.3E-37 8E-42 363.3 20.1 252 779-1044 188-448 (543)
146 1mqb_A Ephrin type-A receptor 100.0 3.3E-37 1.1E-41 345.1 20.3 249 781-1048 49-306 (333)
147 3llt_A Serine/threonine kinase 100.0 5.8E-37 2E-41 347.9 22.3 195 777-981 36-261 (360)
148 3a7i_A MST3 kinase, serine/thr 100.0 6.4E-37 2.2E-41 338.6 22.0 248 777-1045 23-271 (303)
149 3is5_A Calcium-dependent prote 100.0 3.2E-37 1.1E-41 337.5 19.4 246 780-1044 26-278 (285)
150 2vd5_A DMPK protein; serine/th 100.0 9.7E-38 3.3E-42 356.7 15.8 247 778-1044 63-327 (412)
151 3ork_A Serine/threonine protei 100.0 5E-38 1.7E-42 348.6 13.1 248 780-1044 16-273 (311)
152 1u59_A Tyrosine-protein kinase 100.0 3.3E-37 1.1E-41 338.0 19.4 247 781-1047 15-268 (287)
153 3c1x_A Hepatocyte growth facto 100.0 1.8E-37 6.1E-42 351.6 17.7 248 781-1047 94-351 (373)
154 3i6u_A CDS1, serine/threonine- 100.0 3.1E-37 1E-41 356.0 19.9 249 779-1045 138-400 (419)
155 1o6v_A Internalin A; bacterial 100.0 4.7E-36 1.6E-40 352.4 30.2 346 181-582 44-389 (466)
156 3g33_A Cell division protein k 100.0 7.5E-37 2.6E-41 338.9 22.1 261 779-1045 12-297 (308)
157 3lxp_A Non-receptor tyrosine-p 100.0 2.1E-37 7.2E-42 344.6 17.8 259 779-1047 34-306 (318)
158 3bhy_A Death-associated protei 100.0 8E-37 2.7E-41 334.3 22.1 247 780-1044 9-265 (283)
159 3pls_A Macrophage-stimulating 100.0 5.7E-37 2E-41 338.3 21.1 250 781-1048 26-284 (298)
160 3f3z_A Calcium/calmodulin-depe 100.0 7.2E-37 2.5E-41 333.5 21.5 245 780-1044 13-261 (277)
161 2v62_A Serine/threonine-protei 100.0 1.6E-37 5.5E-42 349.7 16.8 255 780-1048 41-325 (345)
162 3lzb_A Epidermal growth factor 100.0 4.3E-37 1.5E-41 343.2 20.0 249 780-1048 19-275 (327)
163 3t9t_A Tyrosine-protein kinase 100.0 2.7E-37 9.3E-42 334.9 17.8 247 780-1047 12-260 (267)
164 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.4E-37 1.2E-41 359.4 19.5 247 781-1048 189-437 (452)
165 3gni_B Strad alpha; kinase fol 100.0 6.2E-37 2.1E-41 351.2 21.3 264 778-1045 27-334 (389)
166 3gxj_A TGF-beta receptor type- 100.0 1.3E-38 4.6E-43 352.3 7.0 257 780-1048 7-294 (303)
167 2acx_A G protein-coupled recep 100.0 2.9E-37 1E-41 362.8 18.7 250 779-1044 187-444 (576)
168 3cok_A Serine/threonine-protei 100.0 2.2E-37 7.6E-42 337.7 16.4 245 780-1044 15-262 (278)
169 3dbq_A Dual specificity protei 100.0 2.8E-37 9.4E-42 347.5 17.5 248 778-1045 11-274 (343)
170 2ozo_A Tyrosine-protein kinase 100.0 7.4E-37 2.5E-41 368.7 22.3 245 783-1047 343-594 (613)
171 2eue_A Carbon catabolite derep 100.0 3.7E-37 1.3E-41 335.4 17.8 241 781-1044 18-262 (275)
172 2zmd_A Dual specificity protei 100.0 4.6E-37 1.6E-41 350.9 19.5 248 778-1045 58-321 (390)
173 2rku_A Serine/threonine-protei 100.0 6.2E-37 2.1E-41 337.1 19.7 244 780-1044 19-265 (294)
174 2y7j_A Phosphorylase B kinase 100.0 1E-36 3.5E-41 345.3 22.0 247 780-1044 98-359 (365)
175 4agu_A Cyclin-dependent kinase 100.0 4.9E-37 1.7E-41 341.0 19.0 259 780-1044 7-284 (311)
176 3f66_A Hepatocyte growth facto 100.0 7.3E-37 2.5E-41 337.3 19.8 248 781-1047 30-287 (298)
177 3lij_A Calcium/calmodulin depe 100.0 1.1E-36 3.6E-41 360.0 22.3 246 780-1044 41-291 (494)
178 2xir_A Vascular endothelial gr 100.0 4.5E-37 1.5E-41 342.2 18.0 253 779-1047 30-306 (316)
179 3kmu_A ILK, integrin-linked ki 100.0 3.4E-37 1.2E-41 334.9 16.6 246 780-1048 14-267 (271)
180 2yex_A Serine/threonine-protei 100.0 9E-37 3.1E-41 332.6 19.8 246 781-1044 12-261 (276)
181 3q5i_A Protein kinase; CDPK, m 100.0 1.2E-36 3.9E-41 360.6 22.3 247 779-1044 39-301 (504)
182 3mwu_A Calmodulin-domain prote 100.0 1.2E-36 4E-41 359.1 22.2 247 780-1045 26-277 (486)
183 3fdn_A Serine/threonine-protei 100.0 6.2E-37 2.1E-41 334.4 18.3 242 781-1045 14-258 (279)
184 2jam_A Calcium/calmodulin-depe 100.0 1.1E-36 3.6E-41 337.0 20.3 245 780-1044 13-261 (304)
185 3og7_A AKAP9-BRAF fusion prote 100.0 2.9E-37 9.8E-42 338.7 15.6 252 779-1048 27-285 (289)
186 1fvr_A Tyrosine-protein kinase 100.0 9.4E-37 3.2E-41 341.1 20.0 250 780-1047 29-296 (327)
187 3lm5_A Serine/threonine-protei 100.0 5.3E-37 1.8E-41 342.7 18.0 247 782-1044 35-287 (327)
188 3pfq_A PKC-B, PKC-beta, protei 100.0 7.7E-37 2.6E-41 371.8 20.8 244 780-1044 345-597 (674)
189 3kfa_A Tyrosine-protein kinase 100.0 6.9E-37 2.4E-41 335.8 18.4 248 780-1047 17-267 (288)
190 2owb_A Serine/threonine-protei 100.0 6.5E-37 2.2E-41 343.2 18.5 244 780-1044 45-291 (335)
191 3nyv_A Calmodulin-domain prote 100.0 6E-37 2.1E-41 361.8 19.2 246 780-1044 30-281 (484)
192 2wqm_A Serine/threonine-protei 100.0 8.1E-37 2.8E-41 339.0 19.0 255 780-1048 36-294 (310)
193 3e7e_A HBUB1, BUB1A, mitotic c 100.0 9.7E-37 3.3E-41 346.4 20.0 244 778-1047 67-335 (365)
194 3cc6_A Protein tyrosine kinase 100.0 9.9E-37 3.4E-41 333.1 19.2 248 780-1047 16-269 (281)
195 2w5a_A Serine/threonine-protei 100.0 2.7E-37 9.2E-42 337.3 14.6 250 780-1046 10-269 (279)
196 1qpc_A LCK kinase; alpha beta 100.0 1.4E-36 4.6E-41 331.7 19.9 247 780-1047 17-265 (279)
197 3brb_A Proto-oncogene tyrosine 100.0 1.4E-36 4.6E-41 337.7 20.2 254 778-1048 36-305 (313)
198 4hgt_A Casein kinase I isoform 100.0 1.2E-36 4E-41 335.4 19.4 253 778-1047 11-276 (296)
199 3oz6_A Mitogen-activated prote 100.0 5.4E-37 1.9E-41 351.4 17.2 258 780-1045 13-329 (388)
200 2h34_A Serine/threonine-protei 100.0 8E-37 2.7E-41 338.5 18.0 250 780-1047 38-292 (309)
201 1u5q_A Serine/threonine protei 100.0 8.8E-37 3E-41 342.9 18.5 243 779-1044 57-305 (348)
202 1xbb_A Tyrosine-protein kinase 100.0 9E-37 3.1E-41 335.2 18.2 244 783-1047 24-275 (291)
203 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.1E-36 3.7E-41 340.5 19.0 258 780-1044 38-318 (329)
204 3ttj_A Mitogen-activated prote 100.0 8.2E-37 2.8E-41 356.2 18.4 258 778-1045 64-356 (464)
205 1t4h_A Serine/threonine-protei 100.0 2.2E-36 7.7E-41 332.0 20.8 244 780-1044 30-282 (290)
206 3eqc_A Dual specificity mitoge 100.0 5.6E-37 1.9E-41 347.9 16.3 256 780-1044 37-324 (360)
207 2yfx_A Tyrosine-protein kinase 100.0 1.1E-36 3.7E-41 340.6 18.2 252 779-1047 33-300 (327)
208 2a19_B Interferon-induced, dou 100.0 3.8E-36 1.3E-40 329.2 22.1 239 780-1047 15-270 (284)
209 2clq_A Mitogen-activated prote 100.0 1.4E-36 4.7E-41 334.7 18.6 249 780-1044 26-278 (295)
210 1ua2_A CAK, cell division prot 100.0 9.6E-37 3.3E-41 343.5 17.7 262 778-1045 12-292 (346)
211 4fvq_A Tyrosine-protein kinase 100.0 8.5E-37 2.9E-41 335.2 16.6 241 781-1048 13-272 (289)
212 1b6c_B TGF-B superfamily recep 100.0 2.1E-36 7.1E-41 340.9 19.9 252 779-1048 45-333 (342)
213 4fl3_A Tyrosine-protein kinase 100.0 1.5E-36 5.2E-41 366.6 20.0 245 782-1047 375-627 (635)
214 3n9x_A Phosphotransferase; mal 100.0 2.5E-36 8.5E-41 350.2 20.9 196 778-980 28-253 (432)
215 3rp9_A Mitogen-activated prote 100.0 2E-36 6.8E-41 354.7 20.3 191 780-977 57-282 (458)
216 4aaa_A Cyclin-dependent kinase 100.0 1.1E-36 3.7E-41 341.1 17.2 259 780-1044 29-306 (331)
217 3uzp_A CKI-delta, CKID, casein 100.0 2.3E-36 7.8E-41 333.1 19.5 252 779-1047 12-276 (296)
218 3com_A Serine/threonine-protei 100.0 3.6E-36 1.2E-40 334.5 21.2 247 778-1044 31-278 (314)
219 1vzo_A Ribosomal protein S6 ki 100.0 1.1E-36 3.6E-41 344.0 17.1 250 779-1045 57-322 (355)
220 1x8b_A WEE1HU, WEE1-like prote 100.0 3.1E-36 1.1E-40 330.8 20.2 242 780-1045 15-280 (289)
221 3lxl_A Tyrosine-protein kinase 100.0 1.3E-36 4.4E-41 340.0 17.1 259 780-1047 27-299 (327)
222 2h8h_A Proto-oncogene tyrosine 100.0 9.5E-37 3.2E-41 362.7 16.6 247 781-1048 272-520 (535)
223 4e7w_A Glycogen synthase kinas 100.0 1.9E-36 6.7E-41 346.5 18.5 257 779-1045 43-322 (394)
224 2ycf_A Serine/threonine-protei 100.0 2.4E-36 8.2E-41 337.0 18.5 247 780-1044 14-274 (322)
225 1byg_A CSK, protein (C-termina 100.0 1.7E-36 5.9E-41 330.6 17.0 243 780-1047 25-269 (278)
226 3fhr_A MAP kinase-activated pr 100.0 1.4E-36 4.9E-41 340.3 16.6 246 781-1044 34-287 (336)
227 2vgo_A Serine/threonine-protei 100.0 2.9E-36 1E-40 329.9 18.7 241 781-1044 19-262 (284)
228 3q60_A ROP5B; pseudokinase, tr 100.0 5.8E-37 2E-41 348.9 13.0 251 779-1044 65-352 (371)
229 3byv_A Rhoptry kinase; malaria 100.0 3.9E-37 1.3E-41 350.9 11.3 238 780-1044 77-359 (377)
230 1cm8_A Phosphorylated MAP kina 100.0 3.2E-36 1.1E-40 341.3 18.7 257 778-1045 27-308 (367)
231 2vwi_A Serine/threonine-protei 100.0 1.9E-36 6.7E-41 334.9 16.5 252 779-1044 18-287 (303)
232 2jii_A Serine/threonine-protei 100.0 8.9E-37 3E-41 344.8 14.0 252 779-1047 45-332 (352)
233 2h6d_A 5'-AMP-activated protei 100.0 3.7E-36 1.3E-40 327.7 18.4 243 781-1045 16-262 (276)
234 2x7f_A TRAF2 and NCK-interacti 100.0 4.6E-36 1.6E-40 335.6 19.5 256 770-1044 18-286 (326)
235 3mi9_A Cell division protein k 100.0 8.2E-36 2.8E-40 337.0 21.4 259 780-1044 21-311 (351)
236 1phk_A Phosphorylase kinase; g 100.0 8.8E-36 3E-40 328.7 21.0 247 780-1044 21-283 (298)
237 3rgf_A Cyclin-dependent kinase 100.0 2E-36 6.9E-41 348.6 15.5 194 781-981 26-238 (405)
238 2r3i_A Cell division protein k 100.0 8.5E-36 2.9E-40 329.0 19.8 260 780-1044 7-283 (299)
239 3sv0_A Casein kinase I-like; t 100.0 8.1E-36 2.8E-40 347.4 20.5 251 780-1047 11-274 (483)
240 3ll6_A Cyclin G-associated kin 100.0 5.2E-36 1.8E-40 336.9 18.3 247 779-1047 31-304 (337)
241 3qyz_A Mitogen-activated prote 100.0 5.4E-36 1.8E-40 339.9 18.3 261 776-1044 27-313 (364)
242 2buj_A Serine/threonine-protei 100.0 2E-36 6.8E-41 337.1 14.2 253 779-1047 32-302 (317)
243 3an0_A Dual specificity mitoge 100.0 2.6E-36 9E-41 339.5 15.3 249 780-1044 55-310 (340)
244 2xrw_A Mitogen-activated prote 100.0 7.1E-36 2.4E-40 339.6 18.7 257 779-1045 28-319 (371)
245 3fme_A Dual specificity mitoge 100.0 2.9E-36 1E-40 331.1 14.9 249 780-1044 11-266 (290)
246 3kvw_A DYRK2, dual specificity 100.0 9E-36 3.1E-40 344.6 19.7 194 779-982 100-302 (429)
247 2wei_A Calmodulin-domain prote 100.0 1.4E-35 4.8E-40 325.0 20.0 246 780-1044 26-276 (287)
248 3eb0_A Putative uncharacterize 100.0 1.1E-35 3.8E-40 339.7 19.5 257 778-1044 9-321 (383)
249 1blx_A Cyclin-dependent kinase 100.0 1.8E-35 6.1E-40 330.9 20.7 263 776-1044 11-296 (326)
250 2w1i_A JAK2; chromosomal rearr 100.0 5E-36 1.7E-40 334.9 16.1 260 780-1048 45-319 (326)
251 1u46_A ACK-1, activated CDC42 100.0 5E-36 1.7E-40 329.5 15.7 249 780-1047 22-280 (291)
252 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.2E-36 2.8E-40 332.4 17.7 248 780-1048 37-299 (319)
253 2pml_X PFPK7, Ser/Thr protein 100.0 5.2E-36 1.8E-40 338.4 16.2 248 780-1044 35-322 (348)
254 2j7t_A Serine/threonine-protei 100.0 4.6E-36 1.6E-40 331.7 15.4 249 778-1044 21-275 (302)
255 3e3p_A Protein kinase, putativ 100.0 1.4E-35 4.9E-40 336.5 19.8 259 779-1044 26-314 (360)
256 1j1b_A Glycogen synthase kinas 100.0 1.3E-35 4.4E-40 342.5 19.1 256 779-1044 57-336 (420)
257 3nsz_A CK II alpha, casein kin 100.0 1.6E-35 5.3E-40 331.9 19.0 251 780-1044 40-319 (330)
258 2b9h_A MAP kinase FUS3, mitoge 100.0 9.9E-36 3.4E-40 336.9 17.5 258 779-1044 14-305 (353)
259 2rio_A Serine/threonine-protei 100.0 1.5E-35 5.1E-40 343.6 19.0 247 780-1044 19-295 (434)
260 3pg1_A Mitogen-activated prote 100.0 1.6E-35 5.6E-40 336.2 18.2 265 774-1045 20-317 (362)
261 1zy4_A Serine/threonine-protei 100.0 1.9E-35 6.5E-40 326.9 18.2 246 780-1045 10-284 (303)
262 2j0j_A Focal adhesion kinase 1 100.0 2.8E-35 9.5E-40 357.0 20.4 248 780-1047 394-647 (656)
263 2fst_X Mitogen-activated prote 100.0 4.7E-36 1.6E-40 339.4 12.6 257 778-1045 31-312 (367)
264 3p23_A Serine/threonine-protei 100.0 3.7E-35 1.3E-39 338.9 20.3 245 778-1044 26-283 (432)
265 3cek_A Dual specificity protei 100.0 2.7E-35 9.2E-40 327.1 18.1 248 777-1044 29-292 (313)
266 2vx3_A Dual specificity tyrosi 100.0 5.8E-35 2E-39 333.6 20.4 196 779-982 57-261 (382)
267 2wtk_C Serine/threonine-protei 100.0 6.8E-35 2.3E-39 322.8 20.2 245 781-1045 10-264 (305)
268 3o6n_A APL1; leucine-rich repe 100.0 1.6E-34 5.6E-39 331.3 23.4 334 327-703 44-377 (390)
269 4exu_A Mitogen-activated prote 100.0 2.9E-35 1E-39 334.5 16.9 255 779-1045 45-324 (371)
270 1wak_A Serine/threonine-protei 100.0 6.3E-35 2.2E-39 336.1 19.4 256 780-1044 41-391 (397)
271 3a99_A Proto-oncogene serine/t 100.0 3.9E-35 1.3E-39 326.5 16.9 237 779-1044 46-293 (320)
272 1z57_A Dual specificity protei 100.0 1.4E-34 4.9E-39 325.4 21.7 254 780-1044 18-328 (339)
273 3oja_B Anopheles plasmodium-re 100.0 2.4E-34 8.2E-39 348.2 23.4 335 327-704 50-384 (597)
274 2i6l_A Mitogen-activated prote 100.0 9.5E-35 3.2E-39 324.1 18.3 257 779-1044 14-305 (320)
275 3aln_A Dual specificity mitoge 100.0 2.6E-35 8.9E-40 329.5 13.5 251 780-1044 26-285 (327)
276 3qa8_A MGC80376 protein; kinas 100.0 2.4E-35 8.3E-40 349.3 13.8 260 780-1043 18-296 (676)
277 2iwi_A Serine/threonine-protei 100.0 1.1E-34 3.9E-39 322.0 17.3 236 780-1044 35-283 (312)
278 3coi_A Mitogen-activated prote 100.0 9.5E-35 3.2E-39 328.5 16.3 253 780-1044 28-305 (353)
279 2dyl_A Dual specificity mitoge 100.0 1.1E-34 3.8E-39 323.1 16.0 247 780-1044 29-283 (318)
280 1q8y_A SR protein kinase; tran 100.0 3.3E-34 1.1E-38 327.1 19.2 251 780-1044 23-333 (373)
281 2eu9_A Dual specificity protei 100.0 5.9E-34 2E-38 322.7 20.1 254 780-1044 23-333 (355)
282 4fmz_A Internalin; leucine ric 100.0 3.9E-33 1.3E-37 314.6 26.4 307 324-677 40-346 (347)
283 3o6n_A APL1; leucine-rich repe 100.0 1.8E-33 6.1E-38 322.7 22.7 313 302-656 43-355 (390)
284 4fmz_A Internalin; leucine ric 100.0 9.5E-33 3.2E-37 311.5 26.8 309 298-653 38-346 (347)
285 3m2w_A MAP kinase-activated pr 100.0 3.5E-33 1.2E-37 307.7 19.2 224 782-1044 24-256 (299)
286 1ogq_A PGIP-2, polygalacturona 100.0 3.4E-33 1.2E-37 309.1 18.1 259 448-710 50-312 (313)
287 3uqc_A Probable conserved tran 100.0 2.6E-33 9E-38 305.5 16.7 225 780-1048 35-262 (286)
288 3oja_B Anopheles plasmodium-re 100.0 7.5E-33 2.6E-37 335.1 22.2 312 303-656 50-361 (597)
289 2pzi_A Probable serine/threoni 100.0 2.5E-33 8.6E-38 343.8 16.9 231 780-1045 84-322 (681)
290 3dzo_A Rhoptry kinase domain; 100.0 3.7E-33 1.3E-37 321.2 15.1 238 780-1044 82-363 (413)
291 2ft3_A Biglycan; proteoglycan, 100.0 8.8E-32 3E-36 301.2 22.8 294 25-387 34-331 (332)
292 1ogq_A PGIP-2, polygalacturona 100.0 1.1E-32 3.6E-37 305.2 14.9 253 424-679 50-307 (313)
293 2vuw_A Serine/threonine-protei 100.0 4.1E-33 1.4E-37 312.7 10.4 234 781-1043 25-329 (336)
294 2ft3_A Biglycan; proteoglycan, 100.0 1.5E-31 5.1E-36 299.3 21.9 266 402-675 56-331 (332)
295 1z7x_W Ribonuclease inhibitor; 100.0 6.7E-35 2.3E-39 343.0 -5.9 375 304-678 3-441 (461)
296 1xku_A Decorin; proteoglycan, 100.0 3.8E-31 1.3E-35 295.9 23.4 290 352-675 31-330 (330)
297 1xku_A Decorin; proteoglycan, 100.0 3.4E-31 1.2E-35 296.3 21.7 295 25-387 32-330 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 9.8E-34 3.4E-38 333.1 -4.5 353 327-679 2-413 (461)
299 3ogk_B Coronatine-insensitive 100.0 1.1E-30 3.6E-35 317.6 4.7 424 224-674 66-548 (592)
300 2z66_A Variable lymphocyte rec 100.0 6E-29 2.1E-33 274.9 18.2 248 3-270 11-263 (306)
301 3ogk_B Coronatine-insensitive 100.0 2.9E-31 9.9E-36 322.6 -0.5 459 198-683 64-581 (592)
302 2z66_A Variable lymphocyte rec 100.0 9.6E-29 3.3E-33 273.3 18.4 252 427-682 10-266 (306)
303 2z80_A TOLL-like receptor 2, v 100.0 1.6E-29 5.6E-34 285.4 12.3 283 374-682 29-319 (353)
304 1ozn_A Reticulon 4 receptor; N 100.0 1.9E-28 6.5E-33 267.8 19.1 223 3-244 15-238 (285)
305 3zyi_A Leucine-rich repeat-con 100.0 3E-28 1E-32 284.6 21.9 239 14-268 65-303 (452)
306 2z80_A TOLL-like receptor 2, v 100.0 9.6E-29 3.3E-33 279.1 16.4 286 348-657 27-318 (353)
307 3zyj_A Leucine-rich repeat-con 100.0 4.9E-28 1.7E-32 281.9 21.9 240 13-268 53-292 (440)
308 3zyj_A Leucine-rich repeat-con 100.0 8.1E-28 2.8E-32 280.0 21.2 250 427-681 46-296 (440)
309 3zyi_A Leucine-rich repeat-con 100.0 9.1E-28 3.1E-32 280.6 21.6 250 427-681 57-307 (452)
310 1ozn_A Reticulon 4 receptor; N 100.0 6.1E-28 2.1E-32 263.8 17.6 211 472-682 32-243 (285)
311 4fcg_A Uncharacterized protein 100.0 5.7E-28 2E-32 268.8 16.4 229 24-287 81-309 (328)
312 3o53_A Protein LRIM1, AGAP0063 99.9 6E-29 2.1E-33 275.9 6.5 246 424-683 34-282 (317)
313 1wwl_A Monocyte differentiatio 99.9 1.1E-28 3.9E-33 273.0 5.6 249 421-679 40-311 (312)
314 4fcg_A Uncharacterized protein 99.9 7.8E-27 2.7E-31 259.6 18.7 224 449-677 82-314 (328)
315 4azs_A Methyltransferase WBDD; 99.9 3.6E-28 1.2E-32 288.9 8.2 186 784-979 242-438 (569)
316 1wwl_A Monocyte differentiatio 99.9 8.6E-28 3E-32 265.9 8.8 201 399-605 94-309 (312)
317 3g06_A SSPH2 (leucine-rich rep 99.9 3.9E-26 1.3E-30 272.9 22.6 201 424-681 101-301 (622)
318 3o53_A Protein LRIM1, AGAP0063 99.9 9.2E-28 3.2E-32 266.3 7.5 253 334-624 16-270 (317)
319 3g06_A SSPH2 (leucine-rich rep 99.9 7E-26 2.4E-30 270.7 24.2 269 25-401 41-309 (622)
320 3oja_A Leucine-rich immune mol 99.9 3.2E-27 1.1E-31 277.2 10.4 234 425-672 35-270 (487)
321 2p1m_B Transport inhibitor res 99.9 1E-28 3.5E-33 300.3 -4.2 443 210-676 46-543 (594)
322 2p1m_B Transport inhibitor res 99.9 6.1E-29 2.1E-33 302.3 -6.4 437 186-652 46-543 (594)
323 2z62_A TOLL-like receptor 4, v 99.9 1.4E-25 4.7E-30 243.8 19.1 210 473-683 29-243 (276)
324 2z62_A TOLL-like receptor 4, v 99.9 1.4E-25 4.8E-30 243.7 17.4 218 14-270 18-239 (276)
325 3oja_A Leucine-rich immune mol 99.9 1.3E-26 4.4E-31 272.1 9.8 243 22-293 32-276 (487)
326 2o6q_A Variable lymphocyte rec 99.9 2.6E-24 9E-29 232.6 20.2 186 497-682 38-223 (270)
327 2o6q_A Variable lymphocyte rec 99.9 6.3E-24 2.1E-28 229.6 19.7 204 450-656 18-221 (270)
328 1p9a_G Platelet glycoprotein I 99.9 6.8E-24 2.3E-28 231.2 17.8 205 444-679 6-210 (290)
329 3rfs_A Internalin B, repeat mo 99.9 1.2E-24 4.1E-29 235.5 11.6 224 447-683 18-241 (272)
330 3goz_A Leucine-rich repeat-con 99.9 2E-25 6.7E-30 252.5 5.1 253 429-681 3-301 (362)
331 2xwt_C Thyrotropin receptor; s 99.9 6.3E-24 2.1E-28 225.3 15.2 205 15-265 23-236 (239)
332 3rfs_A Internalin B, repeat mo 99.9 2.2E-24 7.4E-29 233.4 11.0 234 19-280 14-247 (272)
333 3en9_A Glycoprotease, O-sialog 99.9 7.7E-25 2.6E-29 258.8 7.7 182 781-979 341-538 (540)
334 1p9a_G Platelet glycoprotein I 99.9 2.3E-23 7.8E-28 227.1 18.7 203 44-268 6-208 (290)
335 3goz_A Leucine-rich repeat-con 99.9 7.5E-25 2.6E-29 247.7 1.4 260 381-660 3-304 (362)
336 2xwt_C Thyrotropin receptor; s 99.9 4.5E-23 1.5E-27 218.7 15.0 196 473-674 32-236 (239)
337 4glp_A Monocyte differentiatio 99.9 2.4E-23 8E-28 230.1 10.2 202 472-678 91-308 (310)
338 2ca6_A RAN GTPase-activating p 99.9 1.8E-24 6.3E-29 247.2 1.0 242 440-681 24-320 (386)
339 3m19_A Variable lymphocyte rec 99.9 2.4E-22 8.1E-27 214.7 16.9 181 498-681 16-196 (251)
340 1h6u_A Internalin H; cell adhe 99.9 1.9E-22 6.3E-27 222.2 15.9 194 445-654 38-231 (308)
341 1h6u_A Internalin H; cell adhe 99.9 1.8E-22 6.1E-27 222.3 14.5 215 447-679 18-232 (308)
342 2ca6_A RAN GTPase-activating p 99.9 3.7E-24 1.3E-28 244.7 0.5 270 343-649 23-339 (386)
343 4glp_A Monocyte differentiatio 99.9 8.1E-23 2.8E-27 225.8 10.9 203 447-655 90-309 (310)
344 2ast_B S-phase kinase-associat 99.9 1.4E-23 4.8E-28 235.3 4.8 251 425-683 48-312 (336)
345 4ay9_X Follicle-stimulating ho 99.9 2.8E-22 9.6E-27 225.4 14.5 113 16-128 22-136 (350)
346 3m19_A Variable lymphocyte rec 99.9 1.3E-21 4.5E-26 208.9 17.1 159 497-655 36-194 (251)
347 4ay9_X Follicle-stimulating ho 99.9 1E-21 3.6E-26 220.7 16.2 247 420-675 6-257 (350)
348 2ast_B S-phase kinase-associat 99.9 8.3E-23 2.8E-27 229.0 7.1 211 447-661 92-314 (336)
349 2o6s_A Variable lymphocyte rec 99.8 7.7E-21 2.6E-25 196.7 15.8 172 15-232 19-190 (208)
350 1zar_A RIO2 kinase; serine kin 99.8 3.7E-21 1.3E-25 208.1 7.9 148 775-953 89-253 (282)
351 2o6s_A Variable lymphocyte rec 99.8 2.8E-20 9.5E-25 192.4 13.2 140 518-664 50-189 (208)
352 3cvr_A Invasion plasmid antige 99.8 7.4E-20 2.5E-24 215.8 15.4 189 49-280 60-255 (571)
353 3cvr_A Invasion plasmid antige 99.8 5.2E-20 1.8E-24 217.1 13.4 151 496-665 100-255 (571)
354 1h6t_A Internalin B; cell adhe 99.8 6.9E-20 2.4E-24 199.7 10.7 150 517-678 65-214 (291)
355 1m9s_A Internalin B; cell inva 99.8 4.2E-20 1.4E-24 220.6 9.4 204 19-277 16-219 (605)
356 2xot_A Amphoterin-induced prot 99.8 9.7E-20 3.3E-24 205.5 11.6 179 500-681 22-206 (361)
357 1h6t_A Internalin B; cell adhe 99.8 2.5E-19 8.4E-24 195.4 14.4 198 447-660 23-220 (291)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 2.1E-19 7.3E-24 187.1 13.2 157 523-682 14-171 (220)
359 2v9t_B SLIT homolog 2 protein 99.8 2.2E-19 7.5E-24 187.0 12.7 136 545-680 33-168 (220)
360 1m9s_A Internalin B; cell inva 99.8 2.9E-19 1E-23 213.4 12.6 188 427-630 24-211 (605)
361 3e6j_A Variable lymphocyte rec 99.8 9E-19 3.1E-23 183.7 13.9 155 523-681 22-176 (229)
362 2v9t_B SLIT homolog 2 protein 99.8 7.1E-19 2.4E-23 183.1 12.5 153 499-654 14-166 (220)
363 2xot_A Amphoterin-induced prot 99.8 6.6E-19 2.3E-23 198.6 12.8 174 452-628 22-201 (361)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 9.8E-19 3.4E-23 182.0 12.8 155 500-657 15-170 (220)
365 1xeu_A Internalin C; cellular 99.8 4.5E-19 1.5E-23 190.1 8.1 171 446-655 17-187 (263)
366 3e6j_A Variable lymphocyte rec 99.8 6.6E-18 2.2E-22 177.1 15.1 105 26-133 21-125 (229)
367 4ezg_A Putative uncharacterize 99.7 5.1E-18 1.8E-22 173.5 12.9 154 517-678 41-195 (197)
368 1xeu_A Internalin C; cellular 99.7 2.5E-18 8.4E-23 184.3 10.5 170 495-679 18-187 (263)
369 3sb4_A Hypothetical leucine ri 99.7 1.2E-18 4E-23 194.0 7.1 221 447-670 100-327 (329)
370 3sb4_A Hypothetical leucine ri 99.7 1.8E-18 6.2E-23 192.5 8.6 287 350-647 23-328 (329)
371 1dce_A Protein (RAB geranylger 99.7 2.5E-20 8.6E-25 221.4 -7.3 190 45-272 346-550 (567)
372 4ezg_A Putative uncharacterize 99.7 7.6E-18 2.6E-22 172.3 11.4 152 494-653 42-194 (197)
373 1dce_A Protein (RAB geranylger 99.7 1.5E-19 5E-24 214.7 -2.9 140 449-599 424-567 (567)
374 1w8a_A SLIT protein; signaling 99.7 1.4E-17 4.7E-22 169.4 9.7 129 523-654 11-140 (192)
375 4b8c_D Glucose-repressible alc 99.7 1E-17 3.4E-22 205.5 8.3 196 48-314 173-369 (727)
376 1w8a_A SLIT protein; signaling 99.7 6.4E-17 2.2E-21 164.4 10.4 133 547-682 11-144 (192)
377 1zth_A RIO1 serine protein kin 99.7 1.1E-16 3.8E-21 170.8 12.5 136 779-929 50-219 (258)
378 4b8c_D Glucose-repressible alc 99.7 1.6E-17 5.3E-22 203.8 6.2 191 24-241 173-369 (727)
379 4fdw_A Leucine rich hypothetic 99.7 6.5E-16 2.2E-20 175.3 16.9 240 426-676 137-382 (401)
380 4fdw_A Leucine rich hypothetic 99.6 1.5E-15 5.2E-20 172.3 17.6 266 351-653 112-383 (401)
381 2wfh_A SLIT homolog 2 protein 99.6 6.4E-16 2.2E-20 156.9 12.4 126 3-133 14-139 (193)
382 2ell_A Acidic leucine-rich nuc 99.6 4.4E-16 1.5E-20 154.7 10.8 132 496-629 24-160 (168)
383 2ell_A Acidic leucine-rich nuc 99.6 4.4E-16 1.5E-20 154.7 9.4 132 520-653 24-160 (168)
384 2wfh_A SLIT homolog 2 protein 99.6 8.4E-16 2.9E-20 156.0 11.5 112 569-681 32-143 (193)
385 2o6r_A Variable lymphocyte rec 99.6 1.7E-15 5.8E-20 151.8 12.3 130 3-136 11-140 (177)
386 2o6r_A Variable lymphocyte rec 99.6 9.9E-16 3.4E-20 153.6 10.6 133 547-682 10-142 (177)
387 2je0_A Acidic leucine-rich nuc 99.6 8.5E-16 2.9E-20 149.2 8.9 127 496-624 17-148 (149)
388 2je0_A Acidic leucine-rich nuc 99.6 1.1E-15 3.6E-20 148.5 8.8 128 519-648 16-148 (149)
389 4fs7_A Uncharacterized protein 99.6 1.7E-14 5.8E-19 164.7 20.1 238 418-669 156-393 (394)
390 4fs7_A Uncharacterized protein 99.6 1.3E-14 4.5E-19 165.6 18.6 335 171-549 59-393 (394)
391 1ds9_A Outer arm dynein; leuci 99.6 8.9E-17 3.1E-21 164.4 -3.3 111 515-630 43-154 (198)
392 1ds9_A Outer arm dynein; leuci 99.6 9.6E-17 3.3E-21 164.2 -3.7 157 516-679 14-187 (198)
393 4gyi_A RIO2 kinase; protein ki 99.6 1.9E-15 6.4E-20 166.7 6.2 146 772-929 91-265 (397)
394 1a9n_A U2A', U2A'; complex (nu 99.5 3.9E-15 1.3E-19 149.0 7.2 107 569-678 43-154 (176)
395 1a9n_A U2A', U2A'; complex (nu 99.5 9.6E-15 3.3E-19 146.1 7.7 85 567-652 63-152 (176)
396 3g39_A Variable lymphocyte rec 99.5 9.7E-14 3.3E-18 137.6 10.6 106 26-134 11-116 (170)
397 2r9u_A Variable lymphocyte rec 99.4 2.1E-13 7.1E-18 135.7 10.6 105 26-133 14-118 (174)
398 3g39_A Variable lymphocyte rec 99.4 4.1E-13 1.4E-17 133.1 10.5 106 2-111 12-117 (170)
399 2r9u_A Variable lymphocyte rec 99.4 3.6E-13 1.2E-17 133.9 9.8 112 2-118 15-126 (174)
400 3un9_A NLR family member X1; l 99.4 7E-15 2.4E-19 165.1 -3.5 171 472-662 72-261 (372)
401 3un9_A NLR family member X1; l 99.4 7.1E-15 2.4E-19 165.1 -3.5 136 447-582 71-225 (372)
402 4gt6_A Cell surface protein; l 99.4 9.5E-12 3.3E-16 141.8 20.1 134 512-652 257-390 (394)
403 4gt6_A Cell surface protein; l 99.4 7.4E-12 2.5E-16 142.7 18.8 308 354-675 66-389 (394)
404 2ifg_A High affinity nerve gro 99.2 1.3E-11 4.5E-16 138.1 8.4 104 27-133 11-116 (347)
405 2ifg_A High affinity nerve gro 99.2 1.7E-11 5.8E-16 137.3 8.1 104 548-654 12-117 (347)
406 4h09_A Hypothetical leucine ri 99.1 8.8E-10 3E-14 124.9 19.5 148 463-615 208-355 (379)
407 4h09_A Hypothetical leucine ri 99.1 2E-09 6.8E-14 122.0 19.5 303 322-662 40-354 (379)
408 2ra8_A Uncharacterized protein 99.0 2.7E-10 9.4E-15 126.5 7.6 84 567-651 251-341 (362)
409 2ra8_A Uncharacterized protein 99.0 1.7E-10 5.8E-15 128.2 5.3 156 514-675 166-341 (362)
410 3tm0_A Aminoglycoside 3'-phosp 99.0 1.8E-09 6.1E-14 115.5 12.4 135 783-927 21-212 (263)
411 1nd4_A Aminoglycoside 3'-phosp 98.9 4.2E-09 1.5E-13 112.5 10.5 129 784-927 27-213 (264)
412 3dxp_A Putative acyl-COA dehyd 98.8 9.6E-09 3.3E-13 115.3 11.6 142 781-928 43-248 (359)
413 1io0_A Tropomodulin; LRR prote 98.7 3.6E-09 1.2E-13 106.0 0.9 70 538-607 30-108 (185)
414 1io0_A Tropomodulin; LRR prote 98.6 4.7E-09 1.6E-13 105.1 0.5 116 514-629 30-164 (185)
415 3sg8_A APH(2'')-ID; antibiotic 98.6 1.1E-08 3.6E-13 111.9 2.3 184 782-979 26-287 (304)
416 3rw6_A Nuclear RNA export fact 98.4 7.4E-08 2.5E-12 101.1 2.8 63 591-655 169-235 (267)
417 3rw6_A Nuclear RNA export fact 98.2 4.6E-07 1.6E-11 95.0 3.6 94 588-683 137-239 (267)
418 3r70_A Aminoglycoside phosphot 98.2 3.4E-06 1.2E-10 92.5 9.2 134 780-929 41-238 (320)
419 3e4g_A ATP synthase subunit S, 98.1 7E-07 2.4E-11 86.6 2.1 83 569-651 62-150 (176)
420 3e4g_A ATP synthase subunit S, 98.0 2.4E-06 8.3E-11 82.8 3.7 84 521-627 62-150 (176)
421 3d1u_A Putative fructosamine-3 97.9 3.5E-05 1.2E-09 82.6 11.7 75 781-860 20-97 (288)
422 4gkh_A Aminoglycoside 3'-phosp 97.9 3.2E-05 1.1E-09 82.6 11.4 135 782-927 30-222 (272)
423 3tdw_A Gentamicin resistance p 97.9 4.2E-05 1.4E-09 83.1 10.8 137 781-929 24-225 (306)
424 1pgv_A TMD-1, tropomodulin TMD 97.9 4E-06 1.4E-10 83.0 2.3 86 591-676 69-169 (197)
425 1pgv_A TMD-1, tropomodulin TMD 97.8 7E-06 2.4E-10 81.2 3.2 12 640-651 157-168 (197)
426 3ovc_A Hygromycin-B 4-O-kinase 97.8 7.4E-05 2.5E-09 83.1 10.9 74 781-861 46-122 (362)
427 3ats_A Putative uncharacterize 97.7 7.5E-05 2.6E-09 83.2 10.1 80 782-861 26-121 (357)
428 2q83_A YTAA protein; 2635576, 97.6 0.00019 6.5E-09 79.5 10.6 30 898-927 222-251 (346)
429 2olc_A MTR kinase, methylthior 97.5 0.00033 1.1E-08 79.2 10.8 76 781-858 35-120 (397)
430 2pyw_A Uncharacterized protein 97.4 0.00039 1.3E-08 79.3 10.7 77 898-976 232-313 (420)
431 3jr1_A Putative fructosamine-3 97.2 0.00089 3E-08 72.2 10.3 138 781-924 41-232 (312)
432 3rfe_A Platelet glycoprotein I 97.2 0.00035 1.2E-08 64.6 6.2 44 17-60 24-67 (130)
433 3rfe_A Platelet glycoprotein I 96.8 0.0018 6.2E-08 59.7 6.7 60 620-681 12-72 (130)
434 3f7w_A Putative fructosamine-3 96.7 0.0062 2.1E-07 65.2 11.2 75 781-860 20-97 (288)
435 3csv_A Aminoglycoside phosphot 96.7 0.006 2E-07 66.9 11.0 32 898-929 183-218 (333)
436 3dxq_A Choline/ethanolamine ki 96.5 0.0093 3.2E-07 64.3 10.8 29 899-928 174-202 (301)
437 1zyl_A Hypothetical protein YI 96.4 0.016 5.5E-07 63.2 12.1 142 782-928 32-223 (328)
438 2ppq_A HSK, HK, homoserine kin 96.3 0.026 8.9E-07 61.3 12.9 142 782-927 28-216 (322)
439 3i1a_A Spectinomycin phosphotr 96.2 0.019 6.5E-07 62.9 11.2 31 898-928 206-236 (339)
440 2yle_A Protein spire homolog 1 96.0 0.028 9.5E-07 55.7 9.6 102 859-978 34-135 (229)
441 1nw1_A Choline kinase (49.2 KD 95.8 0.021 7.2E-07 64.7 9.2 72 781-859 78-158 (429)
442 2qg7_A Ethanolamine kinase PV0 95.7 0.047 1.6E-06 62.1 11.6 74 781-860 113-188 (458)
443 3c5i_A Choline kinase; choline 95.5 0.029 9.9E-07 62.4 9.2 29 898-927 212-240 (369)
444 3feg_A Choline/ethanolamine ki 95.4 0.036 1.2E-06 61.3 9.3 141 782-928 56-254 (379)
445 3f2s_A CK, chetk-alpha, cholin 92.0 0.37 1.3E-05 53.4 9.0 29 899-927 245-279 (401)
446 3mes_A Choline kinase; malaria 91.4 0.89 3.1E-05 50.9 11.3 29 899-928 263-291 (424)
447 2ks1_B Epidermal growth factor 87.1 0.096 3.3E-06 36.9 -0.5 30 729-758 13-42 (44)
448 2l2t_A Receptor tyrosine-prote 86.7 0.097 3.3E-06 36.7 -0.6 30 729-758 12-41 (44)
449 4ann_A ESSB; membrane protein, 85.2 2.2 7.4E-05 42.2 7.9 115 831-980 43-158 (215)
450 3g15_A CK, chetk-alpha, cholin 84.0 0.28 9.4E-06 55.0 1.1 30 899-928 245-280 (401)
451 4ano_A ESSB; membrane protein, 77.1 5.9 0.0002 39.3 7.8 116 831-981 48-164 (219)
452 2jwa_A Receptor tyrosine-prote 71.3 0.77 2.6E-05 32.2 -0.2 26 732-757 16-41 (44)
453 2lz0_A Uncharacterized protein 51.3 29 0.00098 29.5 6.1 46 59-105 7-52 (100)
454 2lz0_A Uncharacterized protein 49.0 33 0.0011 29.1 6.1 45 436-481 8-52 (100)
455 2k9y_A Ephrin type-A receptor 48.5 3.7 0.00013 28.5 0.0 13 729-741 15-27 (41)
456 3cxl_A N-chimerin; SH2, RHO-GA 43.8 5.9 0.0002 44.8 0.7 55 789-843 152-214 (463)
457 2k1k_A Ephrin type-A receptor 36.0 7.4 0.00025 26.4 -0.1 7 732-738 15-21 (38)
458 1iij_A ERBB-2 receptor protein 31.9 8 0.00027 25.6 -0.4 20 735-754 15-34 (35)
459 2knc_A Integrin alpha-IIB; tra 25.8 10 0.00035 27.9 -0.8 18 727-744 13-30 (54)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.6e-80 Score=771.71 Aligned_cols=668 Identities=29% Similarity=0.421 Sum_probs=607.6
Q ss_pred CCccEEeCCCCccccc---ccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcc--cccccccc
Q 045493 24 PQLAYLDLSVNQLFGT---IPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPE--ELGELTSL 98 (1048)
Q Consensus 24 ~~l~~L~L~~n~l~~~---~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~--~~~~l~~L 98 (1048)
.+++.|||+++++.+. +|.+|+.+++|+.++++.|.+. ..|..|+.+++|++|+|++|.+++.+|. .|..+++|
T Consensus 50 ~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L 128 (768)
T 3rgz_A 50 DKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGL 128 (768)
T ss_dssp TEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTC
T ss_pred CcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCC
Confidence 5799999999999987 8899999999999999999887 4778999999999999999999988888 89999999
Q ss_pred ccccccceecccccCcCc-CCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCC
Q 045493 99 NELALSYNRLNGSIPASL-GNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPR 177 (1048)
Q Consensus 99 ~~L~l~~n~~~~~~~~~~-~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~ 177 (1048)
++|++++|.+++..|..+ .++++|++|++++|++++..|..+ ..+.++++|++|++++|.+++..|.
T Consensus 129 ~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~------------~~~~~l~~L~~L~Ls~n~l~~~~~~ 196 (768)
T 3rgz_A 129 KFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGW------------VLSDGCGELKHLAISGNKISGDVDV 196 (768)
T ss_dssp CEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHH------------HHTTCCTTCCEEECCSSEEESCCBC
T ss_pred CEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhh------------hhhccCCCCCEEECCCCcccccCCc
Confidence 999999999998888766 899999999999999886433211 1167889999999999999987664
Q ss_pred CCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCccccccccc
Q 045493 178 SLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSL 257 (1048)
Q Consensus 178 ~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 257 (1048)
..+++|++|+|++|.+++.+|. ++++++|++|+|++|++.+.+|..+..+++|++|+|++|.+++.+|.. .+++|
T Consensus 197 --~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L 271 (768)
T 3rgz_A 197 --SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSL 271 (768)
T ss_dssp --TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTC
T ss_pred --ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCC
Confidence 8899999999999999987776 999999999999999999888999999999999999999998777754 88999
Q ss_pred ceeecccccccCCCchhhhcc-chhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccc-cccccccceeee
Q 045493 258 LYLYLSHNQLNGSLPSSFGNL-SSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPS-LGNLSNIRGLYI 335 (1048)
Q Consensus 258 ~~L~L~~n~l~~~~p~~~~~L-~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~l 335 (1048)
++|++++|++.+.+|..+..+ ++|++|++++ |.+.+.+|..++++++|++|++++|.+++.+|.. ++.+++|+.|++
T Consensus 272 ~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~L 350 (768)
T 3rgz_A 272 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSG-NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 350 (768)
T ss_dssp CEEECCSSEEEESCCCCSCTTCTTCSEEECCS-SEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEEC
T ss_pred CEEECcCCccCCccCHHHHhhcCcCCEEECcC-CcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeC
Confidence 999999999998888888775 9999999987 7888889999999999999999999999777765 999999999999
Q ss_pred ccccccCCCCcchhccC-CCCeEeccCCccccCcChhhhc--cCCCcEEEeecccccCCchhhhhhhcccceeecccccc
Q 045493 336 RENMLYGSIPEELGRLK-SLSQLSLSVNKLNGSIPHCLGN--LSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQF 412 (1048)
Q Consensus 336 ~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~l~~--l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l 412 (1048)
++|.+.+.+|..+..++ +|++|++++|++++.+|..++. +++|++|++++|.+++.+|..+.++++|+.|++++|++
T Consensus 351 s~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 430 (768)
T 3rgz_A 351 SFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYL 430 (768)
T ss_dssp CSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEE
T ss_pred cCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcc
Confidence 99999989999999997 9999999999999888888877 88999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccc
Q 045493 413 TGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNW 492 (1048)
Q Consensus 413 ~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 492 (1048)
++..|..+..+++|+.|++++|.+++.+|..+..+++|++|++++|++++..+..|..+++|++|+|++|++++..|..+
T Consensus 431 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 510 (768)
T 3rgz_A 431 SGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510 (768)
T ss_dssp ESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred cCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCc------------------
Q 045493 493 IKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGN------------------ 554 (1048)
Q Consensus 493 ~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N------------------ 554 (1048)
..+++|++|++++|.+++.+|..++.+++|++|++++|++++.+|..+.....+..+++..+
T Consensus 511 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (768)
T 3rgz_A 511 GRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGA 590 (768)
T ss_dssp GGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSS
T ss_pred hcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999988887766655544331
Q ss_pred ----cccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccC
Q 045493 555 ----QLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGG 630 (1048)
Q Consensus 555 ----~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 630 (1048)
.+.+..+..+..+..+..++++.|.+++..|..+..+++|+.|+|++|++++..+..++.+++|+.|||++|+++|
T Consensus 591 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g 670 (768)
T 3rgz_A 591 GNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670 (768)
T ss_dssp EEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred ccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCC
Confidence 2345566777888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCCcccccccccccccCCccccCCCCCCCCC
Q 045493 631 NIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQNATIEAFQGNKELCGDVTGLPPC 710 (1048)
Q Consensus 631 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~c 710 (1048)
.+|..++++++|++|+|++|+++|.+|..+..++.|++||+++|+++|.||...+|..+....|.||+++||.+. ++|
T Consensus 671 ~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l--~~C 748 (768)
T 3rgz_A 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL--PRC 748 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS--CCC
T ss_pred CCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC--cCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999875 378
Q ss_pred CC
Q 045493 711 EA 712 (1048)
Q Consensus 711 ~~ 712 (1048)
..
T Consensus 749 ~~ 750 (768)
T 3rgz_A 749 DP 750 (768)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.7e-75 Score=727.83 Aligned_cols=656 Identities=31% Similarity=0.458 Sum_probs=598.7
Q ss_pred CEEEEecCCcceeeecCCC--CCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCc--CCCCCCCCcE
Q 045493 1 VVSINLTGSNLKGTLQEFP--FLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPP--QIGILTNLVV 76 (1048)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~p--~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~--~~~~l~~L~~ 76 (1048)
|++++|++.++.+.+..+| +.....|+.++++.|++. ..|..|+.+++|++|||++|.+++.+|. .++.+++|++
T Consensus 52 v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~ 130 (768)
T 3rgz_A 52 VTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 130 (768)
T ss_dssp EEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCE
T ss_pred EEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCE
Confidence 6889999999988733332 344588999999999886 4678999999999999999999998888 9999999999
Q ss_pred EeCCCCcCCCCCcccc-ccccccccccccceecccccCcC---cCCcCCCceEEeecccccCccCCCCCcccCCCCCCCC
Q 045493 77 LRLSVNQLNGLIPEEL-GELTSLNELALSYNRLNGSIPAS---LGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIP 152 (1048)
Q Consensus 77 L~ls~n~l~~~~~~~~-~~l~~L~~L~l~~n~~~~~~~~~---~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p 152 (1048)
|+|++|.+++..|..+ .++++|++|++++|++++..|.. +.++++|++|++++|.+.+..|
T Consensus 131 L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--------------- 195 (768)
T 3rgz_A 131 LNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--------------- 195 (768)
T ss_dssp EECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB---------------
T ss_pred EECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC---------------
Confidence 9999999998888776 89999999999999999888877 8999999999999999986432
Q ss_pred ccCCCCCCCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCC
Q 045493 153 QDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSN 232 (1048)
Q Consensus 153 ~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 232 (1048)
+..+++|+.|++++|.+++.+|. +..+++|++|+|++|.+++..|..|..+++|++|+|++|++.+.+|.. .+++
T Consensus 196 --~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~ 270 (768)
T 3rgz_A 196 --VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKS 270 (768)
T ss_dssp --CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTT
T ss_pred --cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCC
Confidence 37789999999999999998887 999999999999999999999999999999999999999999877765 8999
Q ss_pred CCeEeccCCccCCCCCcccccc-cccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcc-cCCCCCCcEEE
Q 045493 233 LKFLYLHDNRLSGYIPPKLGSF-KSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKE-IGNLKSLSHLW 310 (1048)
Q Consensus 233 L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~-~~~l~~L~~L~ 310 (1048)
|++|+|++|.+++.+|..+... ++|++|++++|++.+..|..|+.+++|++|++++ |.+.+.+|.. +..+++|++|+
T Consensus 271 L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~ip~~~l~~l~~L~~L~ 349 (768)
T 3rgz_A 271 LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS-NNFSGELPMDTLLKMRGLKVLD 349 (768)
T ss_dssp CCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCS-SEEEEECCHHHHTTCTTCCEEE
T ss_pred CCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCC-CcccCcCCHHHHhcCCCCCEEe
Confidence 9999999999998899888775 9999999999999999999999999999999998 7787777766 99999999999
Q ss_pred ccCceeeccccccccccc-ccceeeeccccccCCCCcchhc--cCCCCeEeccCCccccCcChhhhccCCCcEEEeeccc
Q 045493 311 LSKTQLSGFIPPSLGNLS-NIRGLYIRENMLYGSIPEELGR--LKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENE 387 (1048)
Q Consensus 311 L~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~ 387 (1048)
+++|.+++.+|..+..++ +|+.|++++|.+.+..|..+.. +++|++|++++|++++.+|..++++++|+.|++++|+
T Consensus 350 Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 429 (768)
T 3rgz_A 350 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 429 (768)
T ss_dssp CCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSE
T ss_pred CcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCc
Confidence 999999999999999998 9999999999999989988887 8999999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccc
Q 045493 388 LSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEV 467 (1048)
Q Consensus 388 l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 467 (1048)
+++.+|..+..+++|+.|++++|++++.+|..+..+++|++|++++|.+++.+|..+..+++|++|++++|++++..+..
T Consensus 430 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 509 (768)
T 3rgz_A 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 509 (768)
T ss_dssp EESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGG
T ss_pred ccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccC-----------------
Q 045493 468 FGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSN----------------- 530 (1048)
Q Consensus 468 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N----------------- 530 (1048)
|+.+++|++|+|++|++++..|..+..+++|+.|++++|.+++.+|..+.....+..+++..+
T Consensus 510 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (768)
T 3rgz_A 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHG 589 (768)
T ss_dssp GGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCS
T ss_pred HhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999888766665554431
Q ss_pred -----cccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccccccccccccccccc
Q 045493 531 -----RLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFS 605 (1048)
Q Consensus 531 -----~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 605 (1048)
.+.+..+..+..++.++.++++.|.+++.+|..++.+++|++|||++|++++.+|..++.++.|+.|+|++|+++
T Consensus 590 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~ 669 (768)
T 3rgz_A 590 AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDIS 669 (768)
T ss_dssp SEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCC
T ss_pred cccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccC
Confidence 133455566677788888999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccce-ecCC
Q 045493 606 QEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNE-LQGS 679 (1048)
Q Consensus 606 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~-l~~~ 679 (1048)
+..+..++.+++|+.||||+|+++|.+|..+..+++|++|++++|+++|.+|.. ..+..+....+.+|+ +.|.
T Consensus 670 g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 670 GSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred CCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 999999999999999999999999999999999999999999999999999974 233444455567776 6653
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.1e-64 Score=623.10 Aligned_cols=591 Identities=24% Similarity=0.266 Sum_probs=396.6
Q ss_pred EEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccccccccccee
Q 045493 28 YLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNR 107 (1048)
Q Consensus 28 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~ 107 (1048)
.+|+++++++ .+|..+. +++++|+|++|.++++.+.+|+.+++|++|+|++|+++++.|++|.++++|++|++++|+
T Consensus 8 ~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 84 (680)
T 1ziw_A 8 VADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84 (680)
T ss_dssp EEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSC
T ss_pred eeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCc
Confidence 4455555554 3333332 345555555555554444445555555555555555555445555555555555555555
Q ss_pred cccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCCcce
Q 045493 108 LNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTF 187 (1048)
Q Consensus 108 ~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~~ 187 (1048)
++.+.+.+|+++++|++|++++|++.+ +.|..|..+++|++
T Consensus 85 l~~l~~~~~~~l~~L~~L~L~~n~l~~---------------------------------------~~~~~~~~l~~L~~ 125 (680)
T 1ziw_A 85 LSQLSDKTFAFCTNLTELHLMSNSIQK---------------------------------------IKNNPFVKQKNLIT 125 (680)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCCCC---------------------------------------CCSCTTTTCTTCCE
T ss_pred cCccChhhhccCCCCCEEECCCCccCc---------------------------------------cChhHccccCCCCE
Confidence 554333345555555555555554431 22233444444555
Q ss_pred eeccccCccccCCcccccccccceeccccccccccCCccCc--CCCCCCeEeccCCccCCCCCcccccccccceeecccc
Q 045493 188 VYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAG--NLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHN 265 (1048)
Q Consensus 188 L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n 265 (1048)
|+|++|.+++..|..++.+++|++|+|++|++++..+..+. .+++|++|++++|.+++..|..|..+.+|+.|++++|
T Consensus 126 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~ 205 (680)
T 1ziw_A 126 LDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNV 205 (680)
T ss_dssp EECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTC
T ss_pred EECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccc
Confidence 55555554444444455555555555555555443333322 3455666666666666555566666666666666666
Q ss_pred cccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccccccccc--cceeeeccccccCC
Q 045493 266 QLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSN--IRGLYIRENMLYGS 343 (1048)
Q Consensus 266 ~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~~~ 343 (1048)
.+.. ..+..+. ..+ ..++|+.|++++|.+++..|..|..++. |+.|++++|.+.+.
T Consensus 206 ~l~~---~~~~~~~------------------~~l-~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 206 QLGP---SLTEKLC------------------LEL-ANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCHH---HHHHHHH------------------HHH-TTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred ccCh---hhHHHHH------------------HHh-hhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 5431 1111000 000 1245566666666666555555655543 66666666666655
Q ss_pred CCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccC-----Cch----hhhhhhcccceeeccccccCC
Q 045493 344 IPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSG-----SIP----QEIENMKKLNKYLLFENQFTG 414 (1048)
Q Consensus 344 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~-----~~p----~~~~~l~~L~~l~l~~N~l~~ 414 (1048)
.|..|..+++|++|++++|++++..|..|.++++|+.|++++|...+ .+| ..|..+++|+.|++++|++++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 55566666666666666666665556666666666666666554332 122 255666677777777777776
Q ss_pred CCCcccccCCcccEEEeecccccC--CCCCCcccc--cccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCccc-
Q 045493 415 YLPQNVCQSGSLTHFSVRNNNFVG--PIPRSLQNC--TSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEIS- 489 (1048)
Q Consensus 415 ~~~~~~~~~~~L~~L~l~~N~l~~--~~~~~l~~l--~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~- 489 (1048)
..+..+..+++|++|++++|.+.. .....|..+ ++|+.|++++|+++++.+..|..+++|+.|++++|.+.+..+
T Consensus 344 ~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 423 (680)
T 1ziw_A 344 IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTG 423 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCS
T ss_pred CChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCc
Confidence 666666777777777777776432 223344443 578899999999988888888888999999999999876554
Q ss_pred ccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCccc--CCcCccccCCCccCEEeecCccccCCCccccccc
Q 045493 490 SNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLV--GQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLL 567 (1048)
Q Consensus 490 ~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 567 (1048)
..|..+++|++|++++|.+++..+..|..+++|+.|++++|.+. +..|..|..+++|++|+|++|++++..+..|..+
T Consensus 424 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l 503 (680)
T 1ziw_A 424 QEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGL 503 (680)
T ss_dssp GGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccc
Confidence 67888899999999999998888888889999999999999886 5678889999999999999999997777788999
Q ss_pred cccceeecccCccccccc--------ccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCc
Q 045493 568 AELGYLDLSANRLSKLIP--------KNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNL 639 (1048)
Q Consensus 568 ~~L~~L~Ls~N~l~~~~~--------~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 639 (1048)
++|++|+|++|+++++.+ ..|..+++|++|+|++|+|+.+.+..|..+++|++|||++|+|++..+..|..+
T Consensus 504 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l 583 (680)
T 1ziw_A 504 EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQ 583 (680)
T ss_dssp TTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCC
Confidence 999999999999987633 237889999999999999998888889999999999999999998778888999
Q ss_pred cccCeEECCCCcccCCcccccc-ccCCccEEEeccceecCCCCC
Q 045493 640 ESLEYMNLLQNKLSGPIPSCFR-RMHGLSSIDVSYNELQGSIPH 682 (1048)
Q Consensus 640 ~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~l~ls~N~l~~~~p~ 682 (1048)
++|+.|+|++|+|++..+..+. .+++|+.+++++|+|.+.++.
T Consensus 584 ~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 584 VSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9999999999999999988888 799999999999999998774
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.4e-63 Score=615.15 Aligned_cols=589 Identities=23% Similarity=0.234 Sum_probs=424.4
Q ss_pred EEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCC
Q 045493 3 SINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVN 82 (1048)
Q Consensus 3 ~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n 82 (1048)
.+++++.++ +++|...++++++|||++|+|++..+..|+.+++|++|+|++|.++++.|.+|+.+++|++|+|++|
T Consensus 8 ~~~cs~~~L----~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 8 VADCSHLKL----TQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp EEECCSSCC----SSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eeECCCCCc----cccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 466776655 5677777899999999999999888889999999999999999999999999999999999999999
Q ss_pred cCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCc
Q 045493 83 QLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPV 162 (1048)
Q Consensus 83 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~ 162 (1048)
+++++.+..|.++++|++|++++|+++++.|.+|+++++|++|++++|.+++.. |..+.++++|+
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~---------------~~~~~~l~~L~ 148 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTK---------------LGTQVQLENLQ 148 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCC---------------CCSSSCCTTCC
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccC---------------chhhcccccCC
Confidence 999877778999999999999999999888899999999999999999987532 34566777788
Q ss_pred EEecCCCccccccCCCCC--CCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCc---CCCCCCeEe
Q 045493 163 SVSLHTNNFSGVIPRSLG--GLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAG---NLSNLKFLY 237 (1048)
Q Consensus 163 ~l~l~~n~~~~~~~~~~~--~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~ 237 (1048)
+|++++|.+++..+..+. .+++|+.|++++|++++..|..|..+.+|+.|++++|++.......+. ..++|+.|+
T Consensus 149 ~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~ 228 (680)
T 1ziw_A 149 ELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLS 228 (680)
T ss_dssp EEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEE
T ss_pred EEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEE
Confidence 888888887777666554 347788888888877777777777777888887777776532211111 236677777
Q ss_pred ccCCccCCCCCcccccccc--cceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCce
Q 045493 238 LHDNRLSGYIPPKLGSFKS--LLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQ 315 (1048)
Q Consensus 238 L~~N~l~~~~p~~~~~l~~--L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 315 (1048)
+++|.+++..|..|.+++. |++|++++|++.+..|..| +.+++|+.|++++|+
T Consensus 229 L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~-------------------------~~l~~L~~L~L~~n~ 283 (680)
T 1ziw_A 229 LSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSF-------------------------AWLPQLEYFFLEYNN 283 (680)
T ss_dssp CTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTT-------------------------TTCTTCCEEECCSCC
T ss_pred ccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccc-------------------------cCcccccEeeCCCCc
Confidence 7777777666667766654 7777777777665444444 444555555555555
Q ss_pred eecccccccccccccceeeeccccccC-----CCC----cchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecc
Q 045493 316 LSGFIPPSLGNLSNIRGLYIRENMLYG-----SIP----EELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALREN 386 (1048)
Q Consensus 316 l~~~~~~~~~~l~~L~~L~l~~n~l~~-----~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n 386 (1048)
+++..|..|+.+++|+.|++++|...+ .+| ..|..+++|++|++++|++++..+..|.++++|++|++++|
T Consensus 284 l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 363 (680)
T 1ziw_A 284 IQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNS 363 (680)
T ss_dssp BSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTC
T ss_pred cCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCC
Confidence 555555555555555555555443321 122 25666777777777777777666666777777777777777
Q ss_pred cccCCc--hhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCcccc-C
Q 045493 387 ELSGSI--PQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTG-N 463 (1048)
Q Consensus 387 ~l~~~~--p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~ 463 (1048)
.++... +..+..+ ..++|+.|++++|++++..|..|..+++|++|++++|.+++ +
T Consensus 364 ~~~~~~l~~~~f~~~----------------------~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 421 (680)
T 1ziw_A 364 FTSLRTLTNETFVSL----------------------AHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421 (680)
T ss_dssp BSCCCEECTTTTGGG----------------------TTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEEC
T ss_pred chhhhhcchhhhccc----------------------ccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCcccc
Confidence 654211 1111111 12356666666666666666666667777777777777654 3
Q ss_pred cccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccC--cccCccccccCCCcEEEcccCcccCCcCcccc
Q 045493 464 ISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEIS--GTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLG 541 (1048)
Q Consensus 464 ~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 541 (1048)
+...|..+++|+.|++++|++.+..+..|..+++|+.|++++|.++ +..|..|..+++|++|+|++|++++..+..|.
T Consensus 422 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 501 (680)
T 1ziw_A 422 TGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLE 501 (680)
T ss_dssp CSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhc
Confidence 4456666777777777777776666666777777777777777765 45666777777777777777777766666677
Q ss_pred CCCccCEEeecCccccCCC--------ccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhc
Q 045493 542 KLTSLTSLTLNGNQLSGDI--------PLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIG 613 (1048)
Q Consensus 542 ~l~~L~~L~L~~N~l~~~~--------~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 613 (1048)
.+++|++|+|++|++++.. +..+..+++|++|+|++|+|+.+++..|.++++|+.|+|++|+|+++.+..|.
T Consensus 502 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 581 (680)
T 1ziw_A 502 GLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFN 581 (680)
T ss_dssp TCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhC
Confidence 7777777777777776431 12367777888888888888877666778888888888888888877777777
Q ss_pred cccccCeEECCCCcccCcCCcCcC-CccccCeEECCCCcccCCcc
Q 045493 614 KLVQLSKLDLSHNSLGGNIPSEIC-NLESLEYMNLLQNKLSGPIP 657 (1048)
Q Consensus 614 ~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~ 657 (1048)
.+++|+.|+|++|+|++..+..+. .+++|+.|++++|++.+..+
T Consensus 582 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 582 NQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 888888888888888876666666 67788888888888876543
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.4e-57 Score=555.80 Aligned_cols=533 Identities=22% Similarity=0.217 Sum_probs=319.6
Q ss_pred ecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccc
Q 045493 15 LQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGE 94 (1048)
Q Consensus 15 ~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 94 (1048)
++++|...++++++|||++|+|++..|.+|+.+++|++|+|++|+++++.|++|+.+++|++|+|++|++++..|.+|.+
T Consensus 24 l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 103 (606)
T 3t6q_A 24 LNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSG 103 (606)
T ss_dssp CSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSS
T ss_pred cccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcc
Confidence 34555555556666666666666555566666666666666666666555566666666666666666665555555555
Q ss_pred ccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccc
Q 045493 95 LTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGV 174 (1048)
Q Consensus 95 l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~ 174 (1048)
+++|++|++++|++++..|..|+++++|++|++++|+
T Consensus 104 l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~------------------------------------------- 140 (606)
T 3t6q_A 104 PKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNH------------------------------------------- 140 (606)
T ss_dssp CTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSC-------------------------------------------
T ss_pred cccccEeeccccCcccCCcchhccCCcccEEECCCCc-------------------------------------------
Confidence 5555555555555554444444444444444444444
Q ss_pred cCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCC--eEeccCCccCCCCCcccc
Q 045493 175 IPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLK--FLYLHDNRLSGYIPPKLG 252 (1048)
Q Consensus 175 ~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~L~L~~N~l~~~~p~~~~ 252 (1048)
+++..+..+..+++|++|+|++|++.+..|..++.+++|+ +|++++|.+++..|..|.
T Consensus 141 --------------------l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~ 200 (606)
T 3t6q_A 141 --------------------ISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFD 200 (606)
T ss_dssp --------------------CCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTT
T ss_pred --------------------ccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhh
Confidence 4332222223344455555555555444444455555555 555555555544444433
Q ss_pred cccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccccccccccce
Q 045493 253 SFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRG 332 (1048)
Q Consensus 253 ~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 332 (1048)
. .+|++|++++|. ..+..+.++.+++...+.- ..+..+....++ +..|..+.
T Consensus 201 ~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~------------~~~~~~~~~~i~--------~~~~~~l~---- 252 (606)
T 3t6q_A 201 S-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWL------------GTFEDMDDEDIS--------PAVFEGLC---- 252 (606)
T ss_dssp T-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEEC------------CCCTTSCCCCCC--------GGGGGGGG----
T ss_pred h-ccccccccCCch---hHHHHhhhccccchhheec------------hhhccccccccC--------hhHhchhh----
Confidence 3 456666666664 2233333333222111110 000111111111 11111111
Q ss_pred eeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeecccccc
Q 045493 333 LYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQF 412 (1048)
Q Consensus 333 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l 412 (1048)
. .+|+.|++++|.+++..+..|+++++|++|++++|.++ .+|..+..+++|+
T Consensus 253 -----------------~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~--------- 304 (606)
T 3t6q_A 253 -----------------E-MSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLK--------- 304 (606)
T ss_dssp -----------------G-SEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCC---------
T ss_pred -----------------c-CceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCC---------
Confidence 0 13444444444444444444444444444444444444 2232333333333
Q ss_pred CCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccc-cCcccccCCCCCCCeeeCcCCcccCcc--c
Q 045493 413 TGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLT-GNISEVFGIYPDLELLDLSNNNFFGEI--S 489 (1048)
Q Consensus 413 ~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~-~~~~~~~~~~~~L~~L~Ls~n~l~~~~--~ 489 (1048)
+|++++|.+.+..|..+..+++|++|++++|.+. .++...|..+++|++|++++|.+++.. +
T Consensus 305 ---------------~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 369 (606)
T 3t6q_A 305 ---------------KLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCN 369 (606)
T ss_dssp ---------------EEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEEST
T ss_pred ---------------EEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcc
Confidence 3333333333333444455555555555555554 333444566666666666666666554 5
Q ss_pred ccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCc-cccCCCccCEEeecCccccCCCcccccccc
Q 045493 490 SNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPK-QLGKLTSLTSLTLNGNQLSGDIPLELGLLA 568 (1048)
Q Consensus 490 ~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 568 (1048)
..+..+++|++|++++|.+++..|..|..+++|++|++++|++++..+. .+..+++|++|++++|.+++..|..+..++
T Consensus 370 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 449 (606)
T 3t6q_A 370 LQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLP 449 (606)
T ss_dssp TTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCT
T ss_pred hhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCC
Confidence 5666777777777777777777777777777788888888877765543 377778888888888888777777778888
Q ss_pred ccceeecccCccccc---ccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeE
Q 045493 569 ELGYLDLSANRLSKL---IPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYM 645 (1048)
Q Consensus 569 ~L~~L~Ls~N~l~~~---~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 645 (1048)
+|++|++++|++++. .+..+..+++|++|++++|+++++.+..|..+++|++|||++|++++.+|..+..+++| +|
T Consensus 450 ~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L 528 (606)
T 3t6q_A 450 ALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YL 528 (606)
T ss_dssp TCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EE
T ss_pred CCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EE
Confidence 888888888887762 23567888888888888888888888888889999999999999998889999999999 99
Q ss_pred ECCCCcccCCccccccccCCccEEEeccceecCCCCC
Q 045493 646 NLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682 (1048)
Q Consensus 646 ~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~ 682 (1048)
++++|++++.+|..+..++.|++|++++|+|++.++.
T Consensus 529 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 529 NLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp ECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred ECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 9999999998899899999999999999999988774
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.4e-57 Score=555.96 Aligned_cols=518 Identities=21% Similarity=0.218 Sum_probs=359.7
Q ss_pred CEEEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCC
Q 045493 1 VVSINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLS 80 (1048)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls 80 (1048)
++.++|++++++. ++.-.+..+++|++|||++|+|++..|.+|+.+++|++|+|++|++++..|.+|+++++|++|+++
T Consensus 35 l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 35 TECLEFSFNVLPT-IQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp CCEEECTTCCCSE-ECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred CcEEEccCCccCc-CChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 4678999999854 444456788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCC
Q 045493 81 VNQLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLES 160 (1048)
Q Consensus 81 ~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~ 160 (1048)
+|+++++.|..|.++++|++|++++|++++..+..+..+++|+.|++++|++.+
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------------- 167 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY-------------------------- 167 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE--------------------------
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc--------------------------
Confidence 999999888999999999999999999997554555557888888887776642
Q ss_pred CcEEecCCCccccccCCCCCCCCCcc--eeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEec
Q 045493 161 PVSVSLHTNNFSGVIPRSLGGLKNLT--FVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYL 238 (1048)
Q Consensus 161 L~~l~l~~n~~~~~~~~~~~~l~~L~--~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 238 (1048)
..|..|..+++|+ .|++++|.+++..|..|.. .+|++|++++|.. ++..+..+.+++...+
T Consensus 168 -------------~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~---~~~~~~~l~~~~l~~l 230 (606)
T 3t6q_A 168 -------------LSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQN---LLVIFKGLKNSTIQSL 230 (606)
T ss_dssp -------------ECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSC---HHHHHHHTTTCEEEEE
T ss_pred -------------cChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchh---HHHHhhhccccchhhe
Confidence 3344566667777 6777788777666655543 5677777777652 2333333333333333
Q ss_pred cCCccCCCCCcccccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeec
Q 045493 239 HDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSG 318 (1048)
Q Consensus 239 ~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 318 (1048)
.-+.+. .+...+ ..+..|.++ .. .+|+.|++++|.+++
T Consensus 231 ~~~~~~-----------~~~~~~--------i~~~~~~~l----------------------~~-~~L~~L~l~~n~l~~ 268 (606)
T 3t6q_A 231 WLGTFE-----------DMDDED--------ISPAVFEGL----------------------CE-MSVESINLQKHYFFN 268 (606)
T ss_dssp ECCCCT-----------TSCCCC--------CCGGGGGGG----------------------GG-SEEEEEECTTCCCSS
T ss_pred echhhc-----------cccccc--------cChhHhchh----------------------hc-CceeEEEeecCccCc
Confidence 222111 000001 111111111 11 156777777777776
Q ss_pred ccccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhh-hh
Q 045493 319 FIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQE-IE 397 (1048)
Q Consensus 319 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~-~~ 397 (1048)
..+..|+.+++|+.|++++|.++ .+|..+..+++|++|++++|++++..|..+.++++|+.|++++|.+.+.+|.. +.
T Consensus 269 ~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 347 (606)
T 3t6q_A 269 ISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLE 347 (606)
T ss_dssp CCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTT
T ss_pred cCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhh
Confidence 66666777777777777777766 56666777777777777777777666666777777777777777666443322 44
Q ss_pred hhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCC--CCCcccccccceeEecCCccccCcccccCCCCCCC
Q 045493 398 NMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPI--PRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLE 475 (1048)
Q Consensus 398 ~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~--~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~ 475 (1048)
.+++|+.|++++|+++ +.. +..+..+++|++|++++|.++++.+..|..+++|+
T Consensus 348 ~l~~L~~L~l~~n~l~------------------------~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 403 (606)
T 3t6q_A 348 NLENLRELDLSHDDIE------------------------TSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLE 403 (606)
T ss_dssp TCTTCCEEECCSSCCC------------------------EEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCS
T ss_pred ccCcCCEEECCCCccc------------------------cccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCC
Confidence 4444444444444443 332 44566666666666666666666666666666677
Q ss_pred eeeCcCCcccCcccc-cccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCC---cCccccCCCccCEEee
Q 045493 476 LLDLSNNNFFGEISS-NWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQ---IPKQLGKLTSLTSLTL 551 (1048)
Q Consensus 476 ~L~Ls~n~l~~~~~~-~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~L 551 (1048)
.|++++|++.+..+. .+..+++|++|++++|.+++..|..++.+++|++|++++|++++. .+..+..+++|++|+|
T Consensus 404 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~L 483 (606)
T 3t6q_A 404 LLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVL 483 (606)
T ss_dssp EEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEEC
T ss_pred eEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEEC
Confidence 777777766655433 366677777777777777766666777777777777777777642 2345677777777777
Q ss_pred cCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccC
Q 045493 552 NGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGG 630 (1048)
Q Consensus 552 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 630 (1048)
++|++++..|..|..+++|++|+|++|++++..|..|..+++| .|++++|++++..+..+..+++|+.|++++|.+.+
T Consensus 484 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 484 SFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred CCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccc
Confidence 7777776667777777777777777777777777777777777 78888888877777777777888888888888764
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-56 Score=564.97 Aligned_cols=535 Identities=22% Similarity=0.240 Sum_probs=334.4
Q ss_pred EEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccc-cCCCcCCCCCCCCcEEeCCC
Q 045493 3 SINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFS-GIIPPQIGILTNLVVLRLSV 81 (1048)
Q Consensus 3 ~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~-~~~p~~~~~l~~L~~L~ls~ 81 (1048)
.+++++.+ ++++|. .++++++|||++|.|++..|.+|+.+++|++|+|++|.+. .+.|.+|+.+++|++|+|++
T Consensus 8 ~~dcs~~~----L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 8 IAFYRFCN----LTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEESCCC----SSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred EEEccCCC----CCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 34555544 456666 7788888888888888888888888888888888888444 34477888888888888888
Q ss_pred CcCCCCCccccccccccccccccceecccccCcC--cCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCC
Q 045493 82 NQLNGLIPEELGELTSLNELALSYNRLNGSIPAS--LGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLE 159 (1048)
Q Consensus 82 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~--~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~ 159 (1048)
|+++++.|++|.++++|++|+|++|++++..|.. |+++++|++|+|++|.+.+..
T Consensus 83 N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~----------------------- 139 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLY----------------------- 139 (844)
T ss_dssp CCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCC-----------------------
T ss_pred CcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccc-----------------------
Confidence 8888887888888888888888888887655543 778888888888887765321
Q ss_pred CCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccc--cccceeccccccccccCCccCcCCCC-----
Q 045493 160 SPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNL--RSLSYLGLNKNQLSGSIPPTAGNLSN----- 232 (1048)
Q Consensus 160 ~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~----- 232 (1048)
++..|..+++|++|+|++|.+++..|..+..+ ++|++|+|++|.+.+..|..++.+.+
T Consensus 140 ---------------~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~ 204 (844)
T 3j0a_A 140 ---------------LHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNM 204 (844)
T ss_dssp ---------------CCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTC
T ss_pred ---------------cchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccC
Confidence 12346666777777777777776666666666 66777777777776655555444433
Q ss_pred -CCeEeccCCccCCCCCcccccc---cccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcE
Q 045493 233 -LKFLYLHDNRLSGYIPPKLGSF---KSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSH 308 (1048)
Q Consensus 233 -L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~ 308 (1048)
|++|++++|.+++..+..+... .+++.|.++++.+.
T Consensus 205 ~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~---------------------------------------- 244 (844)
T 3j0a_A 205 VLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMG---------------------------------------- 244 (844)
T ss_dssp CBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCB----------------------------------------
T ss_pred ceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccc----------------------------------------
Confidence 5555555555444444333221 23333333322211
Q ss_pred EEccCceeecccccccccccccceeeeccccccCCCCcchhcc--CCCCeEeccCCccccCcChhhhccCCCcEEEeecc
Q 045493 309 LWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRL--KSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALREN 386 (1048)
Q Consensus 309 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n 386 (1048)
.. ...+.+.+.....|..+ ++|++|++++|.+.+..|..|.++++|+.|+|++|
T Consensus 245 ---------~~---------------~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 300 (844)
T 3j0a_A 245 ---------AG---------------FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYN 300 (844)
T ss_dssp ---------CS---------------SSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESC
T ss_pred ---------cc---------------ccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCC
Confidence 00 00111111111122222 45555555555555555555555555555555555
Q ss_pred cccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCccc
Q 045493 387 ELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISE 466 (1048)
Q Consensus 387 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 466 (1048)
++++..|..|..+++|+.|++++|++++..|..+..+++|+.|++++|.+.+..+..|..+++|++|++++|.++++.
T Consensus 301 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-- 378 (844)
T 3j0a_A 301 KINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-- 378 (844)
T ss_dssp CCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS--
T ss_pred cCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc--
Confidence 555444444444443333333333333333333333333333344444343334444445555555555555544322
Q ss_pred ccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcC-ccccCCCc
Q 045493 467 VFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIP-KQLGKLTS 545 (1048)
Q Consensus 467 ~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~ 545 (1048)
.+++|+.|++++|.++ .+|.. ..+++.|++++|++++... ..+..+++
T Consensus 379 ---------------------------~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~ 427 (844)
T 3j0a_A 379 ---------------------------FIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPH 427 (844)
T ss_dssp ---------------------------SCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTT
T ss_pred ---------------------------CCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCc
Confidence 1445555555555555 22322 3456666666666664321 22345666
Q ss_pred cCEEeecCccccCCCcc-ccccccccceeecccCccc-----ccccccccccccccccccccccccchhhhhhccccccC
Q 045493 546 LTSLTLNGNQLSGDIPL-ELGLLAELGYLDLSANRLS-----KLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLS 619 (1048)
Q Consensus 546 L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 619 (1048)
|++|+|++|++++..+. .+..+++|++|+|++|.++ +..+..|..+++|+.|+|++|+|+++.+..|..+++|+
T Consensus 428 L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 507 (844)
T 3j0a_A 428 LQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALR 507 (844)
T ss_dssp CCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCS
T ss_pred cceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhh
Confidence 77777777776643322 3455667777777777776 33456688889999999999999988888899999999
Q ss_pred eEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCC
Q 045493 620 KLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682 (1048)
Q Consensus 620 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~ 682 (1048)
+|+|++|+|++..+..+. ++|+.|+|++|+|++.+|..| +.|+.+++++|++.+.++.
T Consensus 508 ~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 508 GLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECEL 565 (844)
T ss_dssp EEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSC
T ss_pred eeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCccccccc
Confidence 999999999987777776 899999999999999999876 4788999999999998875
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.5e-56 Score=543.47 Aligned_cols=530 Identities=21% Similarity=0.194 Sum_probs=299.9
Q ss_pred ecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccc
Q 045493 15 LQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGE 94 (1048)
Q Consensus 15 ~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 94 (1048)
++++|...++++++|||++|++++..+..|+.+++|++|+|++|+++++.|.+|+++++|++|+|++|+++++.|++|.+
T Consensus 23 l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~ 102 (606)
T 3vq2_A 23 LSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSG 102 (606)
T ss_dssp CSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTT
T ss_pred cccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCC
Confidence 35566666677777777777777666667777777777777777777666667777777777777777777666777777
Q ss_pred ccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccc
Q 045493 95 LTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGV 174 (1048)
Q Consensus 95 l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~ 174 (1048)
+++|++|++++|++++..+..|+++++|++|++++|.+.+. .
T Consensus 103 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--------------------------------------~ 144 (606)
T 3vq2_A 103 LTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSC--------------------------------------K 144 (606)
T ss_dssp CTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCC--------------------------------------C
T ss_pred cccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccce--------------------------------------e
Confidence 77777777777777665556666666677666666665421 1
Q ss_pred cCCCCCCCCCcceeeccccCccccCCcccccccccc----eeccccccccccCCccCcCCCCCCeEeccCCccC-CCCCc
Q 045493 175 IPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLS----YLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLS-GYIPP 249 (1048)
Q Consensus 175 ~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~ 249 (1048)
+|..|..+++|++|++++|++++..|..|+.+++|+ +|++++|++.+..+..+... +|++|++++|.++ +..|.
T Consensus 145 lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~ 223 (606)
T 3vq2_A 145 LPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKT 223 (606)
T ss_dssp CCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHH
T ss_pred chHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHH
Confidence 234455555555555555555555555555555443 45555555553333333222 4555555555443 22334
Q ss_pred ccccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCC--CCcEEEc-cCceeeccccccccc
Q 045493 250 KLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLK--SLSHLWL-SKTQLSGFIPPSLGN 326 (1048)
Q Consensus 250 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~--~L~~L~L-~~n~l~~~~~~~~~~ 326 (1048)
.+.++++|+.+++..+.+... ..+....+..+..+. .++.+++ ..|.++
T Consensus 224 ~~~~l~~L~~l~l~~~~~~~~-------------------~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~--------- 275 (606)
T 3vq2_A 224 CLQNLAGLHVHRLILGEFKDE-------------------RNLEIFEPSIMEGLCDVTIDEFRLTYTNDFS--------- 275 (606)
T ss_dssp HHHTTTTCEEEEEEEECCTTS-------------------CCCSCCCGGGGTTGGGSEEEEEEECCCTTCC---------
T ss_pred HhccccccccccccccccccC-------------------CcccccChHHhhhhhhccHhheecccccccc---------
Confidence 444555555554443332210 000000001111111 2333333 333333
Q ss_pred ccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceee
Q 045493 327 LSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYL 406 (1048)
Q Consensus 327 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~ 406 (1048)
+..|. +..+++|+.|++++|.+. .+| .+..+++|+.|++++|.+. .+| .+ .++
T Consensus 276 ---------------~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l~-~lp-~~-~l~------ 328 (606)
T 3vq2_A 276 ---------------DDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQLK-QFP-TL-DLP------ 328 (606)
T ss_dssp ---------------GGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCCS-SCC-CC-CCS------
T ss_pred ---------------ccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccCc-ccc-cC-CCC------
Confidence 33333 445555555555555554 233 4445555555555555542 222 11 222
Q ss_pred ccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccC
Q 045493 407 LFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFG 486 (1048)
Q Consensus 407 l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~ 486 (1048)
+|++|++++|...+.. .+..+++|++|++++|++++..
T Consensus 329 ------------------~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~---------------------- 366 (606)
T 3vq2_A 329 ------------------FLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSG---------------------- 366 (606)
T ss_dssp ------------------SCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEE----------------------
T ss_pred ------------------ccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCc----------------------
Confidence 2222222222111111 2333444444444444444331
Q ss_pred cccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcC-ccccCCCccCEEeecCccccCCCccccc
Q 045493 487 EISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIP-KQLGKLTSLTSLTLNGNQLSGDIPLELG 565 (1048)
Q Consensus 487 ~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 565 (1048)
..+..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..+ ..|..+++|++|++++|.+++..|..+.
T Consensus 367 ~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 445 (606)
T 3vq2_A 367 CCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFL 445 (606)
T ss_dssp ECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred chhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhc
Confidence 013334444445555555555442 33455556666666666666655544 4556666666666666666655666666
Q ss_pred cccccceeecccCcccc-cccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCe
Q 045493 566 LLAELGYLDLSANRLSK-LIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEY 644 (1048)
Q Consensus 566 ~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 644 (1048)
.+++|++|++++|++++ ..|..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 446 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 525 (606)
T 3vq2_A 446 GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525 (606)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCE
T ss_pred CCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCE
Confidence 66666666666666665 35666677777777777777777766777777788888888888888777888888888888
Q ss_pred EECCCCcccCCccccccccC-CccEEEeccceecCCCCC
Q 045493 645 MNLLQNKLSGPIPSCFRRMH-GLSSIDVSYNELQGSIPH 682 (1048)
Q Consensus 645 L~L~~N~l~~~~~~~~~~l~-~L~~l~ls~N~l~~~~p~ 682 (1048)
|+|++|+|+ .+|..+..++ +|++|++++|+|.+.++.
T Consensus 526 L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 526 LDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp EECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred EECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 888888887 5555577886 588888888888887765
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.4e-55 Score=534.80 Aligned_cols=510 Identities=21% Similarity=0.221 Sum_probs=366.9
Q ss_pred CCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEecc
Q 045493 160 SPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLH 239 (1048)
Q Consensus 160 ~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 239 (1048)
++++|++++|.+++..+..|.++++|++|+|++|.++++.|.+|.++++|++|+|++|++.+..|..|+++++|++|+|+
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 44444455555555555555566666666666666655555556666666666666666655555556666666666666
Q ss_pred CCccCCCCCcccccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecc
Q 045493 240 DNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGF 319 (1048)
Q Consensus 240 ~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 319 (1048)
+|.+++..+..|+.+++|++|++++|.+.+. .+|..++++++|++|++++|++++.
T Consensus 113 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------------------------~lp~~~~~l~~L~~L~Ls~n~l~~~ 168 (606)
T 3vq2_A 113 ETKLASLESFPIGQLITLKKLNVAHNFIHSC------------------------KLPAYFSNLTNLVHVDLSYNYIQTI 168 (606)
T ss_dssp TSCCCCSSSSCCTTCTTCCEEECCSSCCCCC------------------------CCCGGGGTCTTCCEEECCSSCCCEE
T ss_pred CCccccccccccCCCCCCCEEeCCCCcccce------------------------echHhHhhcCCCCEEEccCCcceec
Confidence 6666544445555666666666666555421 2233444445555555555555555
Q ss_pred cccccccccccc----eeeeccccccCCCCcchhccCCCCeEeccCCccc-cCcChhhhccCCCcEEEeecccccC----
Q 045493 320 IPPSLGNLSNIR----GLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLN-GSIPHCLGNLSNLKFFALRENELSG---- 390 (1048)
Q Consensus 320 ~~~~~~~l~~L~----~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~l~~l~~L~~L~L~~n~l~~---- 390 (1048)
.+..|+.+++|+ .|++++|.+.+..+..+... +|++|++++|.++ +..|..+.+++.|+.+++..+.+.+
T Consensus 169 ~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l 247 (606)
T 3vq2_A 169 TVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNL 247 (606)
T ss_dssp CTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCC
T ss_pred ChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcc
Confidence 455555544443 45555555554333333332 5666666666554 2345556666666666555443321
Q ss_pred --Cchhhhhhhc--ccceeec-cccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcc
Q 045493 391 --SIPQEIENMK--KLNKYLL-FENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNIS 465 (1048)
Q Consensus 391 --~~p~~~~~l~--~L~~l~l-~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 465 (1048)
..+..+..+. .++.+.+ ..|.+.+..|. +..+++|+.|++++|.+.. +| .+..+++|++|++++|.+..++
T Consensus 248 ~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l~~lp- 323 (606)
T 3vq2_A 248 EIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQLKQFP- 323 (606)
T ss_dssp SCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCCSSCC-
T ss_pred cccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccCcccc-
Confidence 1122222222 3555666 66777777776 7788889999999988875 44 7888999999999999996655
Q ss_pred cccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcc--cCccccccCCCcEEEcccCcccCCcCccccCC
Q 045493 466 EVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGT--IPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKL 543 (1048)
Q Consensus 466 ~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 543 (1048)
.+ .+++|+.|++++|+..+.. .+..+++|++|++++|.+++. .+..+..+++|++|++++|.+++ .|..|..+
T Consensus 324 -~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l 398 (606)
T 3vq2_A 324 -TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGL 398 (606)
T ss_dssp -CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTC
T ss_pred -cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCC
Confidence 34 8899999999999655433 677899999999999999866 37889999999999999999985 66889999
Q ss_pred CccCEEeecCccccCCCc-cccccccccceeecccCcccccccccccccccccccccccccccc-hhhhhhccccccCeE
Q 045493 544 TSLTSLTLNGNQLSGDIP-LELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQ-EISIQIGKLVQLSKL 621 (1048)
Q Consensus 544 ~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L 621 (1048)
++|++|++++|++++..| ..+..+++|++|++++|++++..|..+..+++|++|++++|++++ ..+..++.+++|++|
T Consensus 399 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 478 (606)
T 3vq2_A 399 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFL 478 (606)
T ss_dssp TTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEE
Confidence 999999999999998877 689999999999999999999999999999999999999999988 467889999999999
Q ss_pred ECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCCc-cccc-ccccccccCCcc
Q 045493 622 DLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS-KAFQ-NATIEAFQGNKE 699 (1048)
Q Consensus 622 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~-~~~~~~~~~n~~ 699 (1048)
+|++|++++..|..+..+++|++|+|++|++++.+|..|..+++|++|++++|++++ +|.. ..++ ....-.+.+|+.
T Consensus 479 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~ 557 (606)
T 3vq2_A 479 DLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSV 557 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCC
T ss_pred ECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCc
Confidence 999999999999999999999999999999999999999999999999999999984 5543 2333 244456889999
Q ss_pred ccCCC
Q 045493 700 LCGDV 704 (1048)
Q Consensus 700 lc~~~ 704 (1048)
.|...
T Consensus 558 ~c~c~ 562 (606)
T 3vq2_A 558 ACICE 562 (606)
T ss_dssp CCSST
T ss_pred ccCCc
Confidence 98754
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-52 Score=527.95 Aligned_cols=514 Identities=22% Similarity=0.191 Sum_probs=402.9
Q ss_pred CCCccCCCCCCCcEEecCCCccccccCCCCCCCCCcceeeccccCccc-cCCcccccccccceeccccccccccCCccCc
Q 045493 150 SIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVG-SIPSEIGNLRSLSYLGLNKNQLSGSIPPTAG 228 (1048)
Q Consensus 150 ~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~-~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 228 (1048)
.+|. -+++++.|+|+.|.++++.|..|.++++|++|+|++|...+ +.|.+|.++++|++|+|++|++.+..|..|.
T Consensus 18 ~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~ 94 (844)
T 3j0a_A 18 QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQ 94 (844)
T ss_dssp CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSC
T ss_pred CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHcc
Confidence 4555 34677778888888887777788888888888888774433 3467777888888888888887777777777
Q ss_pred CCCCCCeEeccCCccCCCCCcc--cccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCC
Q 045493 229 NLSNLKFLYLHDNRLSGYIPPK--LGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSL 306 (1048)
Q Consensus 229 ~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L 306 (1048)
++++|++|+|++|.+++..|.. |+++++|++|+|++|.+.+..+ +..|+++++|
T Consensus 95 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~------------------------~~~~~~L~~L 150 (844)
T 3j0a_A 95 GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYL------------------------HPSFGKLNSL 150 (844)
T ss_dssp SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCC------------------------CGGGGTCSSC
T ss_pred CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCccccccc------------------------chhHhhCCCC
Confidence 8888888888888777655544 7777788888888777764332 2344555556
Q ss_pred cEEEccCceeecccccccccc--cccceeeeccccccCCCCcchhccCC------CCeEeccCCccccCcChhhhcc---
Q 045493 307 SHLWLSKTQLSGFIPPSLGNL--SNIRGLYIRENMLYGSIPEELGRLKS------LSQLSLSVNKLNGSIPHCLGNL--- 375 (1048)
Q Consensus 307 ~~L~L~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~~~~~~~~~~l~~------L~~L~Ls~N~l~~~~~~~l~~l--- 375 (1048)
++|++++|.+++..+..++.+ ++|+.|++++|.+.+..|..+..+.+ |++|++++|.+++..+..+...
T Consensus 151 ~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~ 230 (844)
T 3j0a_A 151 KSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISK 230 (844)
T ss_dssp CEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCS
T ss_pred CEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCc
Confidence 666666666655555555555 55666666666666555555444443 6677777776666666555442
Q ss_pred CCCcEEEee---------cccccCCchhhhhhh--cccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCc
Q 045493 376 SNLKFFALR---------ENELSGSIPQEIENM--KKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSL 444 (1048)
Q Consensus 376 ~~L~~L~L~---------~n~l~~~~p~~~~~l--~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l 444 (1048)
++++.+.++ .+.+.+..+..|..+ ++|+.|++++|.+.+..+..+..+++|+.|++++|.+++..|..|
T Consensus 231 ~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~ 310 (844)
T 3j0a_A 231 SQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAF 310 (844)
T ss_dssp CCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTT
T ss_pred ccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHh
Confidence 455666655 233444444555554 679999999999998888889999999999999999999999999
Q ss_pred ccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcE
Q 045493 445 QNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHK 524 (1048)
Q Consensus 445 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 524 (1048)
..+++|++|+|++|.++++.+..|..+++|+.|++++|++....+..|..+++|++|++++|.+++. ..+++|+.
T Consensus 311 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~ 385 (844)
T 3j0a_A 311 YGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPD 385 (844)
T ss_dssp TTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSE
T ss_pred cCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcch
Confidence 9999999999999999999999999999999999999999988888999999999999999999843 33889999
Q ss_pred EEcccCcccCCcCccccCCCccCEEeecCccccCCC-ccccccccccceeecccCcccccccc-cccccccccccccccc
Q 045493 525 LDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDI-PLELGLLAELGYLDLSANRLSKLIPK-NLGELRKLHHLNLSNN 602 (1048)
Q Consensus 525 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~Ls~N 602 (1048)
|++++|+++ .+|.. ..+++.|++++|++++.. +..+..+++|++|+|++|++++..+. .+..+++|+.|+|++|
T Consensus 386 L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N 461 (844)
T 3j0a_A 386 IFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGEN 461 (844)
T ss_dssp EEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESC
T ss_pred hccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCC
Confidence 999999998 44443 468999999999999542 33467899999999999999976553 4667899999999999
Q ss_pred cccc-----hhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceec
Q 045493 603 QFSQ-----EISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQ 677 (1048)
Q Consensus 603 ~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~ 677 (1048)
.++. ..+..|..+++|++|||++|+|++..+..|..+++|++|+|++|+|++.++..+. ++|+.||+++|+++
T Consensus 462 ~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~ 539 (844)
T 3j0a_A 462 MLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLL 539 (844)
T ss_dssp CCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCC
T ss_pred ccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCC
Confidence 9974 3345688999999999999999999999999999999999999999998888776 89999999999999
Q ss_pred CCCCCcccccccccccccCCccccCC
Q 045493 678 GSIPHSKAFQNATIEAFQGNKELCGD 703 (1048)
Q Consensus 678 ~~~p~~~~~~~~~~~~~~~n~~lc~~ 703 (1048)
+.+|.. |.......+.||+..|.+
T Consensus 540 ~~~~~~--~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 540 APNPDV--FVSLSVLDITHNKFICEC 563 (844)
T ss_dssp CCCSCC--CSSCCEEEEEEECCCCSS
T ss_pred CCChhH--hCCcCEEEecCCCccccc
Confidence 998864 666666778999999954
No 11
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-50 Score=491.58 Aligned_cols=506 Identities=21% Similarity=0.210 Sum_probs=298.8
Q ss_pred EEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCC
Q 045493 3 SINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVN 82 (1048)
Q Consensus 3 ~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n 82 (1048)
.+++++. +++++|...++++++|||++|+|++..+.+|+.+++|++|+|++|+++++.|++|+.+++|++|+|++|
T Consensus 11 ~~~c~~~----~l~~ip~~l~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 86 (570)
T 2z63_A 11 TYQCMEL----NFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (570)
T ss_dssp EEECCSS----CCSSCCSSSCSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred EEEeCCC----CccccCCCccccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCC
Confidence 3555553 456777777889999999999999888889999999999999999999888888999999999999999
Q ss_pred cCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCc
Q 045493 83 QLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPV 162 (1048)
Q Consensus 83 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~ 162 (1048)
+++++.|++|.++++|++|++++|+++...+..|+++++|++|++++|.+.+. .
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~--------------~------------ 140 (570)
T 2z63_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF--------------K------------ 140 (570)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCC--------------C------------
T ss_pred cCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCcccee--------------c------------
Confidence 99988888899999999999999999876666788888888888888877531 1
Q ss_pred EEecCCCccccccCCCCCCCCCcceeeccccCccccCCccccccccc----ceeccccccccccCCccCcCCCCCCeEec
Q 045493 163 SVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSL----SYLGLNKNQLSGSIPPTAGNLSNLKFLYL 238 (1048)
Q Consensus 163 ~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L----~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 238 (1048)
+|..|..+++|++|++++|++++..|..++.+++| ++|++++|.+.+..|..+..+ +|+.|++
T Consensus 141 ------------lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l 207 (570)
T 2z63_A 141 ------------LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTL 207 (570)
T ss_dssp ------------CCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEE
T ss_pred ------------ChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEec
Confidence 23344455555555555555554444555555555 455555555554444444333 4555555
Q ss_pred cCCccCC-CCCcccccccccceeecccccccC------CCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEc
Q 045493 239 HDNRLSG-YIPPKLGSFKSLLYLYLSHNQLNG------SLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWL 311 (1048)
Q Consensus 239 ~~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~------~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L 311 (1048)
++|.... ..+..+..+++++.+.+....+.. .....|.++.+ + .++.+++
T Consensus 208 ~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~----------------------l-~l~~l~l 264 (570)
T 2z63_A 208 RNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCN----------------------L-TIEEFRL 264 (570)
T ss_dssp ESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGG----------------------S-EEEEEEE
T ss_pred ccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccc----------------------c-chhhhhh
Confidence 5543221 122333444444444433222110 11111111111 1 1344444
Q ss_pred cCc-eeecccccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccC
Q 045493 312 SKT-QLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSG 390 (1048)
Q Consensus 312 ~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 390 (1048)
+++ .+.+..+..+..+++|+.|++++|.+. .+|..+..+ +|++|++++|.+. .+|. ..+++|+.|++++|.+.+
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCC
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccc
Confidence 444 444444555555555555555555554 344444444 5555555555554 3332 244555555555555443
Q ss_pred CchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCC--CCCcccccccceeEecCCccccCccccc
Q 045493 391 SIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPI--PRSLQNCTSLYSLRLERNQLTGNISEVF 468 (1048)
Q Consensus 391 ~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~--~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 468 (1048)
..+. . .+++|++|++++|.+++.. +..+..+++|++|++++|.++++++. |
T Consensus 340 ~~~~--~------------------------~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~ 392 (570)
T 2z63_A 340 AFSE--V------------------------DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-F 392 (570)
T ss_dssp BCCC--C------------------------BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-E
T ss_pred cccc--c------------------------cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-c
Confidence 2222 2 2334444444444443322 34445555555555555555554444 5
Q ss_pred CCCCCCCeeeCcCCcccCccc-ccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCccc-CCcCccccCCCcc
Q 045493 469 GIYPDLELLDLSNNNFFGEIS-SNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLV-GQIPKQLGKLTSL 546 (1048)
Q Consensus 469 ~~~~~L~~L~Ls~n~l~~~~~-~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L 546 (1048)
..+++|+.|++++|.+.+..+ ..+..+++|++|++++|.+++..|..|..+++|++|++++|+++ +.+|..+..+++|
T Consensus 393 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 472 (570)
T 2z63_A 393 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 472 (570)
T ss_dssp ETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred cccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCC
Confidence 555556666666665555433 34555566666666666666555555666666666666666655 3455556666666
Q ss_pred CEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccc
Q 045493 547 TSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQ 606 (1048)
Q Consensus 547 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 606 (1048)
++|+|++|++++..|..+..+++|++|++++|+++++++..|..+++|+.|++++|+++.
T Consensus 473 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 473 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccC
Confidence 666666666665555566666666666666666666655556666666666666666654
No 12
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.9e-50 Score=484.54 Aligned_cols=490 Identities=21% Similarity=0.217 Sum_probs=356.2
Q ss_pred CCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEecc
Q 045493 160 SPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLH 239 (1048)
Q Consensus 160 ~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 239 (1048)
+++.|++++|.++++.+..|.++++|++|+|++|+++++.|..|.++++|++|+|++|++.+..|..|+++++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 45666666666666666677777777777777777776666777777777777777777776666677777777777777
Q ss_pred CCccCCCCCcccccccccceeecccccccCC-CchhhhccchhhhhhhccccccCCCCCcccCCCCCC----cEEEccCc
Q 045493 240 DNRLSGYIPPKLGSFKSLLYLYLSHNQLNGS-LPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSL----SHLWLSKT 314 (1048)
Q Consensus 240 ~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L----~~L~L~~n 314 (1048)
+|.+++..+..|+.+++|++|++++|.+.+. +|..|+++++|++|++++ |.+.+..+..++.+++| +.|++++|
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS-NKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTT-SCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcC-CccceecHHHccchhccchhhhhcccCCC
Confidence 7777755444677777777777777776542 344444444444444333 33333333333333333 45555555
Q ss_pred eeecccccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCcccc-CcChhhhccCCCcEEEeeccccc----
Q 045493 315 QLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNG-SIPHCLGNLSNLKFFALRENELS---- 389 (1048)
Q Consensus 315 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~L~~n~l~---- 389 (1048)
.+++..+..|..+ +|+.|++++ |.... ..+..+.++++++.+.+....+.
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~------------------------n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~ 242 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRN------------------------NFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN 242 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEES------------------------CCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSS
T ss_pred CceecCHHHhccC-cceeEeccc------------------------ccccccchhhhhcCccccceeeeccccccCchh
Confidence 5554444444433 444444444 43221 12334444555544444322211
Q ss_pred --CCchhhhhhhc--ccceeecccc-ccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCc
Q 045493 390 --GSIPQEIENMK--KLNKYLLFEN-QFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNI 464 (1048)
Q Consensus 390 --~~~p~~~~~l~--~L~~l~l~~N-~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 464 (1048)
......+..+. .++.+.+.++ .+.+..|..+..+++|++|++++|.+. .+|..+..+ +|++|++++|.+..++
T Consensus 243 l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~ 320 (570)
T 2z63_A 243 LEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFP 320 (570)
T ss_dssp CEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCC
T ss_pred hhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccC
Confidence 11122233332 2456666666 667777777888888888888888887 467777777 8999999999888665
Q ss_pred ccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCccc--CccccccCCCcEEEcccCcccCCcCccccC
Q 045493 465 SEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTI--PSEIGNMTQLHKLDFSSNRLVGQIPKQLGK 542 (1048)
Q Consensus 465 ~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 542 (1048)
. ..+++|+.|++++|.+.+..+. ..+++|++|++++|.+++.. +..+..+++|++|++++|++.+..+. +..
T Consensus 321 ~---~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~ 394 (570)
T 2z63_A 321 T---LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLG 394 (570)
T ss_dssp B---CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EET
T ss_pred c---ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccc
Confidence 5 3567899999999988765554 67889999999999998654 67788999999999999999865444 899
Q ss_pred CCccCEEeecCccccCCCc-cccccccccceeecccCccccccccccccccccccccccccccc-chhhhhhccccccCe
Q 045493 543 LTSLTSLTLNGNQLSGDIP-LELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFS-QEISIQIGKLVQLSK 620 (1048)
Q Consensus 543 l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~ 620 (1048)
+++|++|++++|.+++..+ ..+..+++|++|++++|++++..|..|..+++|++|++++|+++ +..+..+..+++|++
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 9999999999999987665 57889999999999999999998999999999999999999997 456778899999999
Q ss_pred EECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCCc
Q 045493 621 LDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683 (1048)
Q Consensus 621 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~ 683 (1048)
|+|++|++++..|..|..+++|++|++++|++++.++..|..+++|++|++++|+++|.+|..
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred EECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 999999999888999999999999999999999999999999999999999999999999875
No 13
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.5e-50 Score=439.81 Aligned_cols=249 Identities=20% Similarity=0.329 Sum_probs=203.6
Q ss_pred eeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 782 VLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
+.||+|+||+||+|++. +++.||||+++............+|+..+++++|||||+++|+|.+.+..++|||||
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~ 111 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYC 111 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcC
Confidence 35899999999999863 457899999976544444445567778889999999999999999999999999999
Q ss_pred CCCCHHHHHhcccc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEec
Q 045493 856 ERGSLATILSNEAT-------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSD 922 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~D 922 (1048)
++|+|.++++.... ...++|.++.+|+.|||+||+|||+. +||||||||+|||+++++.+||+|
T Consensus 112 ~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~Ki~D 188 (308)
T 4gt4_A 112 SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISD 188 (308)
T ss_dssp SSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECC
T ss_pred CCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCEEECC
Confidence 99999999965321 24589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCC--CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhh
Q 045493 923 FGTAKFLKPDS--SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVV 999 (1048)
Q Consensus 923 fG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 999 (1048)
||+|+...... ......+||++|||||++.++.|+.++|||||||++|||+| |+.||...+ .....
T Consensus 189 FGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~-----------~~~~~ 257 (308)
T 4gt4_A 189 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-----------NQDVV 257 (308)
T ss_dssp SCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC-----------HHHHH
T ss_pred cccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC-----------HHHHH
Confidence 99998765432 22345679999999999999999999999999999999999 899986432 12233
Q ss_pred hhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1000 NDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
..+..+..++.. ..+...+.+++.+||+.||++||||+||++.|+
T Consensus 258 ~~i~~~~~~~~p---~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~ 302 (308)
T 4gt4_A 258 EMIRNRQVLPCP---DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302 (308)
T ss_dssp HHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHcCCCCCCc---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 333333333222 234456889999999999999999999999986
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.1e-49 Score=475.15 Aligned_cols=472 Identities=22% Similarity=0.220 Sum_probs=300.9
Q ss_pred CCCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEec
Q 045493 159 ESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYL 238 (1048)
Q Consensus 159 ~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 238 (1048)
+++++|++++|.+++..|..|..+++|++|+|++|++++..|++|+.+++|++|+|++|++.+..|..++++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 44555555555555555555555555555555555555544555555555555555555555444434555555555555
Q ss_pred cCCccCCC-CCcccccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceee
Q 045493 239 HDNRLSGY-IPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLS 317 (1048)
Q Consensus 239 ~~N~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 317 (1048)
++|.+++. .|..++++++|++|++++|.+ +....+..+.++++|++|++++|.++
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~------------------------~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVET------------------------FSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSS------------------------CCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcccccchhhhhhccCCccEEECCCCcc------------------------ccccCHhhhhcccccCeeeccCCccc
Confidence 55555431 234455555555555555542 22222345666667777777777777
Q ss_pred cccccccccccccceeeeccccccCCCCcc-hhccCCCCeEeccCCccccCc--C-hhhhccCCCcEEEeecccccCCch
Q 045493 318 GFIPPSLGNLSNIRGLYIRENMLYGSIPEE-LGRLKSLSQLSLSVNKLNGSI--P-HCLGNLSNLKFFALRENELSGSIP 393 (1048)
Q Consensus 318 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~--~-~~l~~l~~L~~L~L~~n~l~~~~p 393 (1048)
+..|..++.+++|+.|++++|.+.. +|.. +..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+
T Consensus 162 ~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 240 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESF 240 (549)
T ss_dssp EECTTTTTTCSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHH
T ss_pred ccChhhhhccccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHH
Confidence 6667777777777777777776653 3333 345677777777777776532 1 223346677777777777765444
Q ss_pred hhh----hhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCc-----
Q 045493 394 QEI----ENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNI----- 464 (1048)
Q Consensus 394 ~~~----~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~----- 464 (1048)
..+ ..++.|+.+++++|.+.+...-. ......+..+.+|+.|++.++.+....
T Consensus 241 ~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~------------------~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l 302 (549)
T 2z81_A 241 NELLKLLRYILELSEVEFDDCTLNGLGDFN------------------PSESDVVSELGKVETVTIRRLHIPQFYLFYDL 302 (549)
T ss_dssp HHHHGGGGGCTTCCEEEEESCEEECCSCCC------------------CCTTTCCCCCTTCCEEEEESCBCSCGGGSCCC
T ss_pred HHHHHHhhhhcccccccccccccccccccc------------------ccchhhhhhhcccccccccccccchhhhcccc
Confidence 333 33445555555555554321100 001122344455555555555544321
Q ss_pred ccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccC---ccccccCCCcEEEcccCcccCCcC--cc
Q 045493 465 SEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIP---SEIGNMTQLHKLDFSSNRLVGQIP--KQ 539 (1048)
Q Consensus 465 ~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~--~~ 539 (1048)
...+...++|+.|++++|+++......+..+++|++|++++|.+++..| ..++.+++|++|+|++|++++..+ ..
T Consensus 303 ~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 382 (549)
T 2z81_A 303 STVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEI 382 (549)
T ss_dssp CHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHH
T ss_pred hhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhh
Confidence 1122334567777777777764333333567777888888887776553 346777888888888888875432 45
Q ss_pred ccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccC
Q 045493 540 LGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLS 619 (1048)
Q Consensus 540 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 619 (1048)
+..+++|++|++++|+++ .+|..+..+++|++|++++|+|+.+.. .+ .++|++|+|++|+|++.. ..+++|+
T Consensus 383 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~-~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~ 454 (549)
T 2z81_A 383 LLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKT-CI--PQTLEVLDVSNNNLDSFS----LFLPRLQ 454 (549)
T ss_dssp GGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCT-TS--CTTCSEEECCSSCCSCCC----CCCTTCC
T ss_pred hhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccc-hh--cCCceEEECCCCChhhhc----ccCChhc
Confidence 777888888888888888 667778888888888888888876533 22 257888999999887743 5788999
Q ss_pred eEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCCc
Q 045493 620 KLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683 (1048)
Q Consensus 620 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~ 683 (1048)
+|||++|+|+ .+|. ...+++|++|+|++|++++.+|..+..++.|++|++++|+|+|.+|..
T Consensus 455 ~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 516 (549)
T 2z81_A 455 ELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 516 (549)
T ss_dssp EEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHH
T ss_pred EEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccH
Confidence 9999999998 5665 467899999999999999999999999999999999999999998853
No 15
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.1e-48 Score=468.93 Aligned_cols=482 Identities=20% Similarity=0.221 Sum_probs=257.4
Q ss_pred eecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccc
Q 045493 14 TLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELG 93 (1048)
Q Consensus 14 ~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~ 93 (1048)
.++++|...++++++|||++|+|++..|..|+.+++|++|+|++|+++++.|++|+.+++|++|+|++|++++..|.+|.
T Consensus 16 ~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 95 (549)
T 2z81_A 16 SFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFG 95 (549)
T ss_dssp CCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHT
T ss_pred ccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhc
Confidence 56678877888999999999999988888899999999999999999988888899999999999999999988888889
Q ss_pred cccccccccccceecccc-cCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccc
Q 045493 94 ELTSLNELALSYNRLNGS-IPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFS 172 (1048)
Q Consensus 94 ~l~~L~~L~l~~n~~~~~-~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~ 172 (1048)
++++|++|++++|++++. .|..|+++++|++|++++|++.+.+| +..+.++++|++|++++|.++
T Consensus 96 ~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~--------------~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 96 PLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIR--------------RIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC--------------TTTTTTCCEEEEEEEEETTCC
T ss_pred cCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccC--------------HhhhhcccccCeeeccCCccc
Confidence 999999999999998863 56788889999999998887432222 123444455555555555555
Q ss_pred cccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccC--C-ccCcCCCCCCeEeccCCccCCCCC-
Q 045493 173 GVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSI--P-PTAGNLSNLKFLYLHDNRLSGYIP- 248 (1048)
Q Consensus 173 ~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~--~-~~~~~l~~L~~L~L~~N~l~~~~p- 248 (1048)
+..|..+..+++|+.|++++|.+....+..+..+++|++|++++|++.+.. | .....+++|+.|++++|.+++..+
T Consensus 162 ~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 241 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241 (549)
T ss_dssp EECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH
T ss_pred ccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH
Confidence 555555555555555555555443211111233444555555554444321 1 111233444444444444432211
Q ss_pred ---cccccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccccc
Q 045493 249 ---PKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLG 325 (1048)
Q Consensus 249 ---~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 325 (1048)
..+..+++|+.+++++|.+.+... +.......+..+.+|+.|++.++.+.... .+
T Consensus 242 ~l~~~~~~~~~L~~l~l~~~~~~~~~~-------------------~~~~~~~~~~~l~~L~~L~l~~~~i~~~~--~~- 299 (549)
T 2z81_A 242 ELLKLLRYILELSEVEFDDCTLNGLGD-------------------FNPSESDVVSELGKVETVTIRRLHIPQFY--LF- 299 (549)
T ss_dssp HHHGGGGGCTTCCEEEEESCEEECCSC-------------------CCCCTTTCCCCCTTCCEEEEESCBCSCGG--GS-
T ss_pred HHHHHhhhhcccccccccccccccccc-------------------ccccchhhhhhhcccccccccccccchhh--hc-
Confidence 112233344444444444332100 00001112233444445554444433110 00
Q ss_pred cccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhh-hccCCCcEEEeecccccCCchhh---hhhhcc
Q 045493 326 NLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCL-GNLSNLKFFALRENELSGSIPQE---IENMKK 401 (1048)
Q Consensus 326 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l-~~l~~L~~L~L~~n~l~~~~p~~---~~~l~~ 401 (1048)
...+..+....+|++|++++|.+. .+|..+ .++++|++|++++|++++.+|.. +..+++
T Consensus 300 ----------------~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~ 362 (549)
T 2z81_A 300 ----------------YDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPS 362 (549)
T ss_dssp ----------------CCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTT
T ss_pred ----------------ccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhcccc
Confidence 011112223344555555555544 333332 34555555555555554433221 333334
Q ss_pred cceeeccccccCCCCC--cccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeC
Q 045493 402 LNKYLLFENQFTGYLP--QNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDL 479 (1048)
Q Consensus 402 L~~l~l~~N~l~~~~~--~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L 479 (1048)
|+.|++++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|++|++++|+++.++...
T Consensus 363 L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~------------ 429 (549)
T 2z81_A 363 LQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCI------------ 429 (549)
T ss_dssp CCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTS------------
T ss_pred CcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchh------------
Confidence 4444444443332211 11233333334444444333 23334444444444444444444332211
Q ss_pred cCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCC
Q 045493 480 SNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGD 559 (1048)
Q Consensus 480 s~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 559 (1048)
.++|++|++++|++++. ...+++|++|+|++|+|+ .+|. ...+++|++|+|++|++++.
T Consensus 430 ---------------~~~L~~L~Ls~N~l~~~----~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~ 488 (549)
T 2z81_A 430 ---------------PQTLEVLDVSNNNLDSF----SLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSV 488 (549)
T ss_dssp ---------------CTTCSEEECCSSCCSCC----CCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCC
T ss_pred ---------------cCCceEEECCCCChhhh----cccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCc
Confidence 13455555555555532 134556666666666665 3333 34556666666666666655
Q ss_pred CccccccccccceeecccCcccc
Q 045493 560 IPLELGLLAELGYLDLSANRLSK 582 (1048)
Q Consensus 560 ~~~~~~~l~~L~~L~Ls~N~l~~ 582 (1048)
.|..+..+++|++|++++|.+..
T Consensus 489 ~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 489 PDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp CTTGGGGCTTCCEEECCSSCBCC
T ss_pred CHHHHhcCcccCEEEecCCCccC
Confidence 55556666666666666666654
No 16
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7e-50 Score=434.37 Aligned_cols=248 Identities=23% Similarity=0.398 Sum_probs=200.2
Q ss_pred eeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 782 VLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
+.||+|+||+||+|++. ++..||||+++.... .......+|++.+++++|||||+++|+|.+.+..|+|||||
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 97 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD-NARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCH-HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCCh-HHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcC
Confidence 45899999999999874 367799999875432 22234456777788999999999999999999999999999
Q ss_pred CCCCHHHHHhccc----------cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccc
Q 045493 856 ERGSLATILSNEA----------TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGT 925 (1048)
Q Consensus 856 ~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~ 925 (1048)
++|+|.++++..+ ....++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+
T Consensus 98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DFGl 174 (299)
T 4asz_A 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGM 174 (299)
T ss_dssp TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCSC
T ss_pred CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCccc
Confidence 9999999997543 234689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhh
Q 045493 926 AKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDL 1002 (1048)
Q Consensus 926 a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1048)
|+........ .....||++|||||++.+..|+.++|||||||++|||+| |+.||...+ ..+....+
T Consensus 175 a~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~-----------~~~~~~~i 243 (299)
T 4asz_A 175 SRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-----------NNEVIECI 243 (299)
T ss_dssp HHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----------HHHHHHHH
T ss_pred ceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----------HHHHHHHH
Confidence 9876543322 223568999999999999999999999999999999999 899986432 12233334
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1003 IDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1003 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
..+..++.+ ..+..++.+++.+||+.||++||||+|++++|+
T Consensus 244 ~~~~~~~~p---~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 244 TQGRVLQRP---RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HcCCCCCCC---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 343333222 223456889999999999999999999999886
No 17
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.7e-48 Score=475.20 Aligned_cols=533 Identities=21% Similarity=0.201 Sum_probs=330.8
Q ss_pred eecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccc
Q 045493 14 TLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELG 93 (1048)
Q Consensus 14 ~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~ 93 (1048)
++++||..+++++++|||++|+|+++.+.+|+++++|++|||++|+|+++.|++|+++++|++|+|++|+|+++.+.+|.
T Consensus 42 ~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~ 121 (635)
T 4g8a_A 42 NFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS 121 (635)
T ss_dssp CCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGT
T ss_pred CcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhc
Confidence 45788888888999999999999988888999999999999999999988888899999999999999999988888889
Q ss_pred cccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCcccc
Q 045493 94 ELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSG 173 (1048)
Q Consensus 94 ~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~ 173 (1048)
++++|++|++++|+++++.+..|++|++|++|++++|.+.+.
T Consensus 122 ~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~-------------------------------------- 163 (635)
T 4g8a_A 122 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF-------------------------------------- 163 (635)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--------------------------------------
T ss_pred CCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccC--------------------------------------
Confidence 999999999999999877777888888888888888877531
Q ss_pred ccCCCCCCCCCcceeeccccCccccCCcccccccccc----eeccccccccccCCccCcCCCCCCeEeccCCccCCC-CC
Q 045493 174 VIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLS----YLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGY-IP 248 (1048)
Q Consensus 174 ~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p 248 (1048)
..|..+..+++|++|+|++|+++++.|..|..+.+++ .++++.|.+....+..+ ....++.+++.+|..... .+
T Consensus 164 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~ 242 (635)
T 4g8a_A 164 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMK 242 (635)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHH
T ss_pred CCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccc
Confidence 1234556666777777777777666666666555443 34455555543222222 222344444444433211 11
Q ss_pred cccccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeeccccccccccc
Q 045493 249 PKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLS 328 (1048)
Q Consensus 249 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 328 (1048)
..+.++..++...+..+.... ...+.......+..+..+...++..+.....
T Consensus 243 ~~~~~l~~l~~~~l~~~~~~~-------------------~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~--------- 294 (635)
T 4g8a_A 243 TCIQGLAGLEVHRLVLGEFRN-------------------EGNLEKFDKSALEGLCNLTIEEFRLAYLDYY--------- 294 (635)
T ss_dssp HHHHTTTTCEEEEEEEECCTT-------------------SCCCSCCCTTTTGGGGGSEEEEEEEECCCSC---------
T ss_pred hhhcCCccccccccccccccc-------------------ccccccccccccccccchhhhhhhhhhhccc---------
Confidence 223333333333332221110 0111111112222222333333322211100
Q ss_pred ccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeecc
Q 045493 329 NIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLF 408 (1048)
Q Consensus 329 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~ 408 (1048)
....+..+..+.+++.+++.+|.+.... .+.....|+.|++.+|.+....+
T Consensus 295 ------------~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~--------------- 345 (635)
T 4g8a_A 295 ------------LDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT--------------- 345 (635)
T ss_dssp ------------EEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC---------------
T ss_pred ------------ccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCc---------------
Confidence 0011223334445555555555544221 23333444444444444432111
Q ss_pred ccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCc-
Q 045493 409 ENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGE- 487 (1048)
Q Consensus 409 ~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~- 487 (1048)
..+..++.+++.+|.+... ..... +++|+.|++++|.+...
T Consensus 346 ------------~~l~~L~~l~l~~n~~~~~--~~~~~------------------------l~~L~~L~ls~n~l~~~~ 387 (635)
T 4g8a_A 346 ------------LKLKSLKRLTFTSNKGGNA--FSEVD------------------------LPSLEFLDLSRNGLSFKG 387 (635)
T ss_dssp ------------CBCTTCCEEEEESCCSCCB--CCCCB------------------------CTTCCEEECCSSCCBEEE
T ss_pred ------------ccchhhhhcccccccCCCC--ccccc------------------------ccccccchhhcccccccc
Confidence 1122333333433333211 11223 44455555555554322
Q ss_pred -ccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCc-CccccCCCccCEEeecCccccCCCccccc
Q 045493 488 -ISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQI-PKQLGKLTSLTSLTLNGNQLSGDIPLELG 565 (1048)
Q Consensus 488 -~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 565 (1048)
.+..+..+.+|+.++++.|.+. ..+..+..+++|+.++++.|+..... ...|..+++++.+++++|.+++..+..+.
T Consensus 388 ~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~ 466 (635)
T 4g8a_A 388 CCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 466 (635)
T ss_dssp ECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred ccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccc
Confidence 2333445556666666666665 33445666777777777766655433 34566677777777777777766677777
Q ss_pred cccccceeecccCcc-cccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCe
Q 045493 566 LLAELGYLDLSANRL-SKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEY 644 (1048)
Q Consensus 566 ~l~~L~~L~Ls~N~l-~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 644 (1048)
.++.|++|+|++|++ ....|..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|..+++|++
T Consensus 467 ~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~ 546 (635)
T 4g8a_A 467 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546 (635)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCE
T ss_pred cchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCE
Confidence 777777777777763 3456677777788888888888888777778888888888888888888777888888888888
Q ss_pred EECCCCcccCCcccccccc-CCccEEEeccceecCCCC
Q 045493 645 MNLLQNKLSGPIPSCFRRM-HGLSSIDVSYNELQGSIP 681 (1048)
Q Consensus 645 L~L~~N~l~~~~~~~~~~l-~~L~~l~ls~N~l~~~~p 681 (1048)
|+|++|+|++.+|..+..+ ++|++|++++|+|++.+.
T Consensus 547 L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 547 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp EECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred EECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 8888888888888888887 578888888888888765
No 18
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.5e-49 Score=433.34 Aligned_cols=247 Identities=26% Similarity=0.382 Sum_probs=206.2
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
+...+.||+|+||+||+|+++ +++.||||++....... .....+|+..++.++|||||+++++|.+.+..|+|||||+
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 154 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS-GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH-HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 445567999999999999886 68999999997543332 3345678888999999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
||+|.+++++ ..+++.++..++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+.+.......
T Consensus 155 gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 227 (346)
T 4fih_A 155 GGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 227 (346)
T ss_dssp TEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB
T ss_pred CCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcc
Confidence 9999999964 2489999999999999999999999 99999999999999999999999999999887666666
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||...+. ......+.. ..++....+..
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----------~~~~~~i~~-~~~~~~~~~~~ 295 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----------LKAMKMIRD-NLPPRLKNLHK 295 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHHH-SSCCCCSCGGG
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----------HHHHHHHHc-CCCCCCCcccc
Confidence 778999999999999999999999999999999999999999863221 111222222 12222222234
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...++.+++.+||++||++|||++|+++
T Consensus 296 ~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 296 VSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 4567889999999999999999999986
No 19
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-49 Score=429.00 Aligned_cols=249 Identities=22% Similarity=0.341 Sum_probs=190.4
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
.+.||+|+||+||+|++. ..||||+++...... ......+|+..+++++|||||+++|++.+ +..|+|||||++|+
T Consensus 41 ~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGs 117 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSS 117 (307)
T ss_dssp EEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCB
T ss_pred eeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCC
Confidence 345899999999999875 358999986543322 22334567777889999999999999865 55899999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC--CCcc
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWS 937 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~ 937 (1048)
|.++++.. ...++|.++..|+.|||+||+|||+. +||||||||+|||+++++.+||+|||+|+...... ....
T Consensus 118 L~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~ 192 (307)
T 3omv_A 118 LYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192 (307)
T ss_dssp HHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----------
T ss_pred HHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeec
Confidence 99999653 24589999999999999999999999 99999999999999999999999999998765332 2345
Q ss_pred cccccccccccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCC-Cchh
Q 045493 938 ELAGTCGYIAPELAYT---MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPP-PLGE 1013 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~---~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 1013 (1048)
..+||+.|||||++.+ ++|+.++|||||||++|||+||+.||...+. .......+......+ ....
T Consensus 193 ~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~----------~~~~~~~~~~~~~~p~~~~~ 262 (307)
T 3omv_A 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN----------RDQIIFMVGRGYASPDLSKL 262 (307)
T ss_dssp -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----------HHHHHHHHHTTCCCCCSTTS
T ss_pred ccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh----------HHHHHHHHhcCCCCCCcccc
Confidence 6789999999999864 4689999999999999999999999864321 011111111111111 1111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
...+...+.+++.+||+.||++||||+||++.|+
T Consensus 263 ~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 263 YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2234456889999999999999999999998875
No 20
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.1e-49 Score=433.77 Aligned_cols=248 Identities=23% Similarity=0.362 Sum_probs=194.2
Q ss_pred eeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 782 VLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
+.||+|+||+||+|++. +++.||||+++.... .......+|++.+++++|||||+++|+|.+.+..|+|||||
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 125 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCH-HHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 35899999999999875 467899999975332 22234556777788999999999999999999999999999
Q ss_pred CCCCHHHHHhcccc------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecc
Q 045493 856 ERGSLATILSNEAT------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDF 923 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~Df 923 (1048)
++|+|.++++.... ...++|.+++.|+.|||+||+|||+. +||||||||+|||+++++.+||+||
T Consensus 126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~DF 202 (329)
T 4aoj_A 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDF 202 (329)
T ss_dssp TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCC
T ss_pred CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEccc
Confidence 99999999975432 24589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCC--CccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhh
Q 045493 924 GTAKFLKPDSS--NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVN 1000 (1048)
Q Consensus 924 G~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1000 (1048)
|+|+....... .....+||+.|||||++.+..|+.++|||||||++|||+| |+.||...+. .....
T Consensus 203 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-----------~~~~~ 271 (329)
T 4aoj_A 203 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-----------TEAID 271 (329)
T ss_dssp C----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-----------HHHHH
T ss_pred ccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-----------HHHHH
Confidence 99987654332 2245679999999999999999999999999999999999 8999864321 12223
Q ss_pred hhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1001 DLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.+..+..++.. ..+..++.+++.+||+.||++||||+||+++|+
T Consensus 272 ~i~~g~~~~~p---~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 272 CITQGRELERP---RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp HHHHTCCCCCC---TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred HHHcCCCCCCc---ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 33333222221 223456889999999999999999999999986
No 21
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.6e-49 Score=434.01 Aligned_cols=248 Identities=22% Similarity=0.334 Sum_probs=198.0
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
...+.||+|+||+||+|++. +++.||||++....... ......+|++.+++++|||||++++++.+.+..|+|||||+
T Consensus 27 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~ 106 (350)
T 4b9d_A 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCE 106 (350)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 34456899999999999886 68999999997643322 22334567777889999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
||+|.+++...+ ...+++.+++.|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+.......
T Consensus 107 gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 182 (350)
T 4b9d_A 107 GGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182 (350)
T ss_dssp TCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred CCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence 999999996543 33478889999999999999999999 99999999999999999999999999998765433334
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
...+||+.|||||++.+..|+.++||||+||++|||+||+.||...+ .......+.....++... .
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----------~~~~~~~i~~~~~~~~~~---~ 248 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----------MKNLVLKIISGSFPPVSL---H 248 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----------HHHHHHHHHHTCCCCCCT---T
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----------HHHHHHHHHcCCCCCCCc---c
Confidence 56789999999999999999999999999999999999999986422 223333444444433322 2
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...++.+++.+||++||++|||++|+++
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 249 YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 3456888999999999999999999986
No 22
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-48 Score=428.11 Aligned_cols=244 Identities=22% Similarity=0.255 Sum_probs=196.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||+||+|+++ +++.||||+++... ...+|+..++.++|||||++++++.+.+..|+|||||+||
T Consensus 62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~------~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 135 (336)
T 4g3f_A 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT------CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH------hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 3456899999999999986 68899999996532 2245777889999999999999999999999999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC-ceEEeccccccccCCCCCC--
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSSN-- 935 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~-~~kl~DfG~a~~~~~~~~~-- 935 (1048)
+|.+++++.+ .+++.++..++.||+.||+|||++ +||||||||+|||++.+| ++||+|||+|+.+..+...
T Consensus 136 ~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 136 SLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp BHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 9999997543 489999999999999999999999 999999999999999997 6999999999987644321
Q ss_pred ---ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493 936 ---WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus 936 ---~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
....+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .....+.....+ ...
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~-----------~~~~~i~~~~~~-~~~ 277 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG-----------PLCLKIASEPPP-IRE 277 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS-----------CCHHHHHHSCCG-GGG
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-----------HHHHHHHcCCCC-chh
Confidence 23467999999999999999999999999999999999999998643211 111111111111 001
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.+......+.+++.+||++||++|||++|+++.|.
T Consensus 278 ~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 278 IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 11233456888999999999999999999998764
No 23
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-48 Score=419.05 Aligned_cols=244 Identities=22% Similarity=0.316 Sum_probs=191.9
Q ss_pred eeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeee----CCeEEEEEEcc
Q 045493 782 VLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSH----TQHLFLVYEYL 855 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~ 855 (1048)
+.||+|+||+||+|.+. +++.||+|++....... ......+|++.+++++|||||+++++|.+ .+.+|+|||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 45899999999999886 67889999987543322 12234567777899999999999999864 35689999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC-CCceEEeccccccccCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL-EYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~-~~~~kl~DfG~a~~~~~~~~ 934 (1048)
++|+|.+++++. ..+++..+..++.||+.||+|||++. ++||||||||+|||++. +|.+||+|||+|+... ..
T Consensus 112 ~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~--~~ 185 (290)
T 3fpq_A 112 TSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--AS 185 (290)
T ss_dssp CSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC--TT
T ss_pred CCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC--CC
Confidence 999999999754 34899999999999999999999981 13999999999999984 7999999999998643 23
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
.....+||+.|||||++.+ +|+.++||||+||++|||+||+.||..... .......+..+..+.. ..
T Consensus 186 ~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~----------~~~~~~~i~~~~~~~~--~~ 252 (290)
T 3fpq_A 186 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----------AAQIYRRVTSGVKPAS--FD 252 (290)
T ss_dssp SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----------HHHHHHHHTTTCCCGG--GG
T ss_pred ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc----------HHHHHHHHHcCCCCCC--CC
Confidence 4456789999999998865 699999999999999999999999863221 1112222222222211 11
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....++.+++.+||++||++|||++|+++
T Consensus 253 ~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 222346888999999999999999999987
No 24
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.4e-48 Score=435.13 Aligned_cols=248 Identities=26% Similarity=0.387 Sum_probs=205.9
Q ss_pred CCcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 777 FEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 777 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
.+...+.||+|+||+||+|+++ +|+.||||++....... .....+|+..++.++|||||+++++|.+.+.+|+|||||
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS-GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH-HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 3455667999999999999886 68999999997543332 344567888889999999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
+||+|.++++.. .+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+......
T Consensus 231 ~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 303 (423)
T ss_dssp TTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred CCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence 999999999642 389999999999999999999999 9999999999999999999999999999988766666
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+.. ..++......
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----------~~~~~~i~~-~~~~~~~~~~ 371 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----------LKAMKMIRD-NLPPRLKNLH 371 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHHH-SCCCCCSCTT
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----------HHHHHHHHc-CCCCCCcccc
Confidence 6778999999999999999999999999999999999999999864321 111111111 1111111222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
....++.+++.+||++||++|||++|+++
T Consensus 372 ~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 33456889999999999999999999986
No 25
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.4e-48 Score=469.59 Aligned_cols=463 Identities=19% Similarity=0.249 Sum_probs=280.3
Q ss_pred CCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeec
Q 045493 183 KNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYL 262 (1048)
Q Consensus 183 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 262 (1048)
.+++.|+|++|.+.|.+|.+|++|++|++|+|++|.+. ..+..++... +...+|... +..|+ +++
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~-~~~~~~~~~~-----------~~~~~~~~~--~~~l~-l~l 145 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEK-VNERLFGPKG-----------ISANMSDEQ--KQKMR-MHY 145 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGG-GTCCSBSTTS-----------BCTTCCHHH--HHHHH-THH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccc-cCCccccccc-----------cccCchHHH--HHHHH-hhH
Confidence 47888888888888888888888888888888888763 1121121100 011233332 45666 777
Q ss_pred ccccccCCCchhhhc-cchhhhhhhccccccCCCCCcccCCCCCCcEEEcc--Cceeecccccccccccccceeeecccc
Q 045493 263 SHNQLNGSLPSSFGN-LSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLS--KTQLSGFIPPSLGNLSNIRGLYIRENM 339 (1048)
Q Consensus 263 ~~n~l~~~~p~~~~~-L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~l~~n~ 339 (1048)
++|.+.+..|..+.. +..+..+++.. ..+. ......++.+++. .|++++ +|..++++++|+.|+|++|.
T Consensus 146 ~~~~l~~~~~~~~~~~~~~l~~~~l~~-~~~~------~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~ 217 (636)
T 4eco_A 146 QKTFVDYDPREDFSDLIKDCINSDPQQ-KSIK------KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSP 217 (636)
T ss_dssp HHHHTCCCGGGGSCHHHHHHHHHCTTS-CCCC------CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCC
T ss_pred HHhhhccCchhhHHHHHHHHhhcCccc-cccc------cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCc
Confidence 777776666655553 22333333321 0000 0111122222222 345555 55555555555555555555
Q ss_pred ccCC-----------------CCcchh--ccCCCCeEeccCCccccCcChhhhccCCCcEEEeeccc-ccC-Cchhhhhh
Q 045493 340 LYGS-----------------IPEELG--RLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENE-LSG-SIPQEIEN 398 (1048)
Q Consensus 340 l~~~-----------------~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~p~~~~~ 398 (1048)
+++. +|..++ .+++|++|+|++|++.+.+|..++++++|++|++++|+ +++ .+|..+.+
T Consensus 218 l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~ 297 (636)
T 4eco_A 218 FVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQA 297 (636)
T ss_dssp CCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHH
T ss_pred cccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHh
Confidence 5553 555555 66666666666666666666666666666666666665 555 55665555
Q ss_pred h------cccceeeccccccCCCCCc--ccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCC
Q 045493 399 M------KKLNKYLLFENQFTGYLPQ--NVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGI 470 (1048)
Q Consensus 399 l------~~L~~l~l~~N~l~~~~~~--~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 470 (1048)
+ ++|+.|++++|+++ .+|. .+..+++|++|++++|.+++.+| .+..+++|++|++++|+++.++ ..+..
T Consensus 298 L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp-~~l~~ 374 (636)
T 4eco_A 298 LADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIP-ANFCG 374 (636)
T ss_dssp HHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECC-TTSEE
T ss_pred hhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCcccccc-Hhhhh
Confidence 5 56666666666666 4555 56666666666666666665555 6666666666666666666333 33555
Q ss_pred CCC-CCeeeCcCCcccCcccccccCCC--CccEEEecCcccCcccCcccc-------ccCCCcEEEcccCcccCCcCccc
Q 045493 471 YPD-LELLDLSNNNFFGEISSNWIKCP--QLATLNMGGNEISGTIPSEIG-------NMTQLHKLDFSSNRLVGQIPKQL 540 (1048)
Q Consensus 471 ~~~-L~~L~Ls~n~l~~~~~~~~~~~~--~L~~L~L~~N~i~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~ 540 (1048)
+++ |+.|++++|+++ .+|..+..++ +|++|++++|.+++..|..+. .+++|++|+|++|++++..+..+
T Consensus 375 l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~ 453 (636)
T 4eco_A 375 FTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELF 453 (636)
T ss_dssp ECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHH
T ss_pred hcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHH
Confidence 555 666666666665 4444444433 666666666666666666665 55666666666666664433444
Q ss_pred cCCCccCEEeecCccccCCCccc-cccc-------cccceeecccCccccccccccc--ccccccccccccccccchhhh
Q 045493 541 GKLTSLTSLTLNGNQLSGDIPLE-LGLL-------AELGYLDLSANRLSKLIPKNLG--ELRKLHHLNLSNNQFSQEISI 610 (1048)
Q Consensus 541 ~~l~~L~~L~L~~N~l~~~~~~~-~~~l-------~~L~~L~Ls~N~l~~~~~~~l~--~l~~L~~L~Ls~N~l~~~~~~ 610 (1048)
..+++|++|+|++|+++ .+|.. +... ++|++|+|++|+|+.+ |..+. .+++|++|+|++|+|++ .+.
T Consensus 454 ~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-p~~~~~~~l~~L~~L~Ls~N~l~~-ip~ 530 (636)
T 4eco_A 454 STGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLTKL-SDDFRATTLPYLVGIDLSYNSFSK-FPT 530 (636)
T ss_dssp HTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCCBC-CGGGSTTTCTTCCEEECCSSCCSS-CCC
T ss_pred ccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCCcc-ChhhhhccCCCcCEEECCCCCCCC-cCh
Confidence 55666666666666666 33332 2222 2666666666666643 44444 66666666666666666 455
Q ss_pred hhccccccCeEEC------CCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecC
Q 045493 611 QIGKLVQLSKLDL------SHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQG 678 (1048)
Q Consensus 611 ~~~~l~~L~~L~L------s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~ 678 (1048)
.+..+++|++|+| ++|++.+.+|..+..+++|++|+|++|+| +.+|..+. +.|++||+++|++..
T Consensus 531 ~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 531 QPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp GGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred hhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 5566666777766 67888889999999999999999999999 56777665 789999999997764
No 26
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.4e-48 Score=473.28 Aligned_cols=487 Identities=18% Similarity=0.243 Sum_probs=248.1
Q ss_pred CccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccccccccc
Q 045493 25 QLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALS 104 (1048)
Q Consensus 25 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~ 104 (1048)
+++.|+|++|++.|.+|.+|+.|++|++|+|++|.+. ..+..++... +...+|... +..|+ ++++
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~-~~~~~~~~~~-----------~~~~~~~~~--~~~l~-l~l~ 146 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEK-VNERLFGPKG-----------ISANMSDEQ--KQKMR-MHYQ 146 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGG-GTCCSBSTTS-----------BCTTCCHHH--HHHHH-THHH
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccc-cCCccccccc-----------cccCchHHH--HHHHH-hhHH
Confidence 4555555555555555555555555555555555443 1112222110 011233333 55666 8888
Q ss_pred ceecccccCcCcCCc-CCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEE--ecCCCccccccCCCCCC
Q 045493 105 YNRLNGSIPASLGNL-SNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSV--SLHTNNFSGVIPRSLGG 181 (1048)
Q Consensus 105 ~n~~~~~~~~~~~~L-~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l--~l~~n~~~~~~~~~~~~ 181 (1048)
+|.+.+..|..+..+ ..+..+++...++.. .....++.+ ....|++++ +|..|+.
T Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~---------------------~~~~~l~~l~l~~~~n~l~~-ip~~l~~ 204 (636)
T 4eco_A 147 KTFVDYDPREDFSDLIKDCINSDPQQKSIKK---------------------SSRITLKDTQIGQLSNNITF-VSKAVMR 204 (636)
T ss_dssp HHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC---------------------CCCCCCCTTTTTCCSCEEEE-ECGGGGG
T ss_pred HhhhccCchhhHHHHHHHHhhcCcccccccc---------------------ccccchhhhhhccccCCCcc-CCHHHhc
Confidence 888777666665532 233333333322210 000111111 112355555 4555555
Q ss_pred CCCcceeeccccCcccc-CCcccccccccceeccccccccccCCccCc--CCCCCCeEeccCCccCCCCCcccccccccc
Q 045493 182 LKNLTFVYLNNNRIVGS-IPSEIGNLRSLSYLGLNKNQLSGSIPPTAG--NLSNLKFLYLHDNRLSGYIPPKLGSFKSLL 258 (1048)
Q Consensus 182 l~~L~~L~L~~n~i~~~-~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 258 (1048)
+++|++|+|++|++++. .+... ..-+.+...+.+|..++ ++++|++|+|++|.+.+.+|..|+++++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~--------~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 276 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAW--------ENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQ 276 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSC--------SCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCC
T ss_pred ccCCCEEECcCCccccccccccc--------cccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCC
Confidence 55555555555555542 00000 00000000001455555 555555555555555555555555555555
Q ss_pred eeeccccc-ccC-CCchhhhcc------chhhhhhhccccccCCCCCc--ccCCCCCCcEEEccCceeeccccccccccc
Q 045493 259 YLYLSHNQ-LNG-SLPSSFGNL------SSLKHLHVHNINKLSGSIPK--EIGNLKSLSHLWLSKTQLSGFIPPSLGNLS 328 (1048)
Q Consensus 259 ~L~L~~n~-l~~-~~p~~~~~L------~~L~~L~l~~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 328 (1048)
+|++++|+ +++ .+|..++.+ ++|++|++++ |.++ .+|. .++.+++|++|++++|+++|.+| .|+.++
T Consensus 277 ~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~-n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~ 353 (636)
T 4eco_A 277 LINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGY-NNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEI 353 (636)
T ss_dssp EEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCS-SCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEE
T ss_pred EEECcCCCCCccccchHHHHhhhccccCCCCCEEECCC-CcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCC
Confidence 55555555 444 445444443 3333333332 2233 3344 44555555555555555555555 555555
Q ss_pred ccceeeeccccccCCCCcchhccCC-CCeEeccCCccccCcChhhhccC--CCcEEEeecccccCCchhhhhhhccccee
Q 045493 329 NIRGLYIRENMLYGSIPEELGRLKS-LSQLSLSVNKLNGSIPHCLGNLS--NLKFFALRENELSGSIPQEIENMKKLNKY 405 (1048)
Q Consensus 329 ~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~l~~l~--~L~~L~L~~n~l~~~~p~~~~~l~~L~~l 405 (1048)
+|+.|++++|.++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|+.|++++|.+++.+|..+....
T Consensus 354 ~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~----- 426 (636)
T 4eco_A 354 KLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLD----- 426 (636)
T ss_dssp EESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTC-----
T ss_pred CCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccc-----
Confidence 5555555555555 44555555555 555555555555 4444444332 455555555555544444333000
Q ss_pred eccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCC-------CCCeee
Q 045493 406 LLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYP-------DLELLD 478 (1048)
Q Consensus 406 ~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~-------~L~~L~ 478 (1048)
.....+.+|++|++++|.++...+..+..+++|++|+|++|+++.++...+.... +|+.|+
T Consensus 427 ------------~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~ 494 (636)
T 4eco_A 427 ------------PTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSID 494 (636)
T ss_dssp ------------SSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEE
T ss_pred ------------cccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEE
Confidence 0001444566666666666644334445566667777777766666555554433 777777
Q ss_pred CcCCcccCccccccc--CCCCccEEEecCcccCcccCccccccCCCcEEEccc------CcccCCcCccccCCCccCEEe
Q 045493 479 LSNNNFFGEISSNWI--KCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSS------NRLVGQIPKQLGKLTSLTSLT 550 (1048)
Q Consensus 479 Ls~n~l~~~~~~~~~--~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~------N~l~~~~~~~~~~l~~L~~L~ 550 (1048)
|++|+++ .+|..+. .+++|++|++++|++++ +|..+..+++|++|+|++ |++.+.+|..+..+++|++|+
T Consensus 495 Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~ 572 (636)
T 4eco_A 495 LRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQ 572 (636)
T ss_dssp CCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEE
T ss_pred CcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEE
Confidence 7777777 4555554 77788888888888876 677777888888888854 555555555555566666666
Q ss_pred ecCccccCCCccccccccccceeecccCccccc
Q 045493 551 LNGNQLSGDIPLELGLLAELGYLDLSANRLSKL 583 (1048)
Q Consensus 551 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 583 (1048)
|++|+++ .+|..+. ++|++|||++|++..+
T Consensus 573 Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 573 IGSNDIR-KVNEKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp CCSSCCC-BCCSCCC--TTCCEEECCSCTTCEE
T ss_pred CCCCcCC-ccCHhHh--CcCCEEECcCCCCccc
Confidence 6666663 4444433 4555555555555543
No 27
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.7e-48 Score=421.33 Aligned_cols=243 Identities=21% Similarity=0.299 Sum_probs=201.0
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
-.+.||+|+||+||+|+++ +++.||||++.+... ........+|++.++.++|||||++++++.+.+..|+|||||+
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 4457899999999999886 688999999865321 1222345667788899999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC--C
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--S 934 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~--~ 934 (1048)
||+|.+++++.+ .+++..++.++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+.+.... .
T Consensus 116 gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~ 189 (311)
T 4aw0_A 116 NGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189 (311)
T ss_dssp TEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcc
Confidence 999999997543 489999999999999999999999 99999999999999999999999999999875443 2
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
.....+||+.|||||++.+..|+.++||||+||++|||+||+.||...+ .......+.......+.
T Consensus 190 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----------~~~~~~~i~~~~~~~p~--- 255 (311)
T 4aw0_A 190 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----------EGLIFAKIIKLEYDFPE--- 255 (311)
T ss_dssp CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHTCCCCCT---
T ss_pred cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHcCCCCCCc---
Confidence 3456789999999999999999999999999999999999999986322 22233334333332221
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVC 1043 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl 1043 (1048)
..+.++.+++.+||++||++|||++|++
T Consensus 256 -~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 256 -KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 2234678899999999999999999863
No 28
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-48 Score=425.73 Aligned_cols=260 Identities=23% Similarity=0.326 Sum_probs=193.9
Q ss_pred eeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC----eEEEEEEccCC
Q 045493 782 VLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ----HLFLVYEYLER 857 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~ 857 (1048)
+.||+|+||+||+|++. |+.||||++..... .....+.++..+.+++|||||+++|+|.+.+ ..|+|||||++
T Consensus 9 ~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~--~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEECSSSEEEEEEET-TEEEEEEEECGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEeeCCCeEEEEEEEC-CEEEEEEEECccch--hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 45899999999999985 89999999865321 1122233444456789999999999997653 68999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC-----FPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
|+|.+++++. .++|..+.+++.|+++||+|||+++ .++||||||||+|||++.++++||+|||+|+.....
T Consensus 86 gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 161 (303)
T 3hmm_A 86 GSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161 (303)
T ss_dssp CBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred CcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence 9999999753 3899999999999999999999762 358999999999999999999999999999877544
Q ss_pred CCC----ccccccccccccccccccC------CCCchhhHHHHHHHHHHHHhCCCCCcccccccC----CCcccccchhh
Q 045493 933 SSN----WSELAGTCGYIAPELAYTM------RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS----LPAPAANMNIV 998 (1048)
Q Consensus 933 ~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~----~~~~~~~~~~~ 998 (1048)
... ....+||+.|||||++.+. .++.++|||||||++|||+||+.||........ ...........
T Consensus 162 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~ 241 (303)
T 3hmm_A 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 241 (303)
T ss_dssp TTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHH
T ss_pred CCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHH
Confidence 322 2345799999999998764 367899999999999999999988754332111 10111111222
Q ss_pred hhhhccCCCCCCch---hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 999 VNDLIDSRLPPPLG---EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 999 ~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
...+......+..+ ...+....+.+++.+||+.||++||||+||++.|++
T Consensus 242 ~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp HHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 22222333222111 123456778999999999999999999999999863
No 29
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.7e-47 Score=405.60 Aligned_cols=242 Identities=20% Similarity=0.306 Sum_probs=184.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc--ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE--IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
-...||+|+||+||+|++. +++.||+|++.+..... ......+|++.++.++|||||++++++.+.+..|+||||+
T Consensus 17 i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~- 95 (275)
T 3hyh_A 17 IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp EEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-
Confidence 3456899999999999876 68999999997543222 2223456777789999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.+++.+.+ .+++.++..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+..... ...
T Consensus 96 ~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-~~~ 168 (275)
T 3hyh_A 96 GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFL 168 (275)
T ss_dssp CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC-Ccc
Confidence 679999997543 489999999999999999999999 9999999999999999999999999999876533 334
Q ss_pred cccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 937 SELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
...+||+.|||||++.+..| +.++||||+||++|||+||+.||...+ .......+.......+.
T Consensus 169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----------~~~~~~~i~~~~~~~p~---- 233 (275)
T 3hyh_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----------IPVLFKNISNGVYTLPK---- 233 (275)
T ss_dssp ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHTCCCCCT----
T ss_pred CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHcCCCCCCC----
Confidence 56789999999999998876 589999999999999999999986322 12223333333322221
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
....++.+++.+||++||++|||++|+++
T Consensus 234 ~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 234 FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 12346788999999999999999999987
No 30
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.8e-48 Score=416.57 Aligned_cols=245 Identities=23% Similarity=0.288 Sum_probs=193.3
Q ss_pred cceeeecccccccEEEEEEc----CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT----SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYE 853 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 853 (1048)
...+.||+|+||+||+|+.. +++.||+|++....... .......|++.+++++|||||++++++.+.+..|+|||
T Consensus 27 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE 106 (304)
T 3ubd_A 27 ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILD 106 (304)
T ss_dssp EEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEEC
T ss_pred EEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEE
Confidence 34557899999999999863 35779999986543221 12233445666788899999999999999999999999
Q ss_pred ccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC
Q 045493 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS 933 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 933 (1048)
||+||+|.+++++.+ .+++.++..++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+......
T Consensus 107 y~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 107 FLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp CCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred cCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 999999999997643 489999999999999999999999 99999999999999999999999999998766555
Q ss_pred CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493 934 SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus 934 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||...+ .......+.......+.
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----------~~~~~~~i~~~~~~~p~-- 247 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD-----------RKETMTMILKAKLGMPQ-- 247 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCT--
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC-----------HHHHHHHHHcCCCCCCC--
Confidence 55567899999999999999999999999999999999999999986422 12223333333333221
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTM-----QKVCN 1044 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~ 1044 (1048)
..+.++.+++.+||++||++|||+ +|+++
T Consensus 248 --~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 248 --FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred --cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 233467889999999999999995 57664
No 31
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.7e-47 Score=424.82 Aligned_cols=251 Identities=22% Similarity=0.315 Sum_probs=197.2
Q ss_pred eeeecccccccEEEEEEcC------CCceeeEEeccCCCCcccchhhHHHHHHhhccc-CceeeEeeEeee-CCeEEEEE
Q 045493 781 MVLHGTGGCGTVYKAELTS------GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRH-RNIVKFYGFCSH-TQHLFLVY 852 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h-~niv~~~~~~~~-~~~~~lv~ 852 (1048)
.+.||+|+||+||+|++.. ++.||||++..............+++.+.+++| ||||+++|+|.+ .+..|+||
T Consensus 69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~ 148 (353)
T 4ase_A 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 148 (353)
T ss_dssp EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence 3468999999999998753 246899988764433323334556666777755 999999999976 45789999
Q ss_pred EccCCCCHHHHHhcccc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceE
Q 045493 853 EYLERGSLATILSNEAT-------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAH 919 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~k 919 (1048)
|||++|+|.++++.... ...+++.++..++.|||+||+|||++ +||||||||+|||+++++.+|
T Consensus 149 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~vK 225 (353)
T 4ase_A 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVK 225 (353)
T ss_dssp ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCCCCEE
Confidence 99999999999975432 24489999999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccch
Q 045493 920 VSDFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMN 996 (1048)
Q Consensus 920 l~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 996 (1048)
|+|||+|+.+..+... ....+||+.|||||++.+..|+.++|||||||++|||+| |+.||..... ..
T Consensus 226 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~----------~~ 295 (353)
T 4ase_A 226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----------DE 295 (353)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----------SH
T ss_pred ECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH----------HH
Confidence 9999999977554433 234678999999999999999999999999999999998 8999864221 11
Q ss_pred hhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 997 IVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.....+..+..++.. .....++.+++.+||+.||++||||+|++++|+
T Consensus 296 ~~~~~i~~g~~~~~p---~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 296 EFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp HHHHHHHHTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCC---ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 112222222222111 123456889999999999999999999999886
No 32
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.4e-46 Score=446.26 Aligned_cols=465 Identities=20% Similarity=0.206 Sum_probs=259.6
Q ss_pred cEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccccce
Q 045493 27 AYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYN 106 (1048)
Q Consensus 27 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n 106 (1048)
++||+++|+|+ .+|..+. ++|++|+|++|.++++.|.+|+.+++|++|+|++|+++++.|+.|.++++|++|++++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 56777777777 4555554 67777777777777666667777777777777777777666667777777777777777
Q ss_pred ecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCCcc
Q 045493 107 RLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLT 186 (1048)
Q Consensus 107 ~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~ 186 (1048)
+++. +|.. .+++|++|++++|++++. ..|..|..+++|+
T Consensus 80 ~l~~-lp~~--~l~~L~~L~L~~N~l~~~--------------------------------------~~p~~~~~l~~L~ 118 (520)
T 2z7x_B 80 KLVK-ISCH--PTVNLKHLDLSFNAFDAL--------------------------------------PICKEFGNMSQLK 118 (520)
T ss_dssp CCCE-EECC--CCCCCSEEECCSSCCSSC--------------------------------------CCCGGGGGCTTCC
T ss_pred ceee-cCcc--ccCCccEEeccCCccccc--------------------------------------cchhhhccCCcce
Confidence 7763 3333 566666666666655421 2456778888888
Q ss_pred eeeccccCccccCCccccccccc--ceeccccccc--cccCCccCcCCC-CCCeEeccCCccCCCCCc-cccccccccee
Q 045493 187 FVYLNNNRIVGSIPSEIGNLRSL--SYLGLNKNQL--SGSIPPTAGNLS-NLKFLYLHDNRLSGYIPP-KLGSFKSLLYL 260 (1048)
Q Consensus 187 ~L~L~~n~i~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L 260 (1048)
+|++++|++++ ..+..+++| ++|+|++|++ .+..|..+..+. +...+++++|.+.+.+++ .+..+++|+.|
T Consensus 119 ~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L 195 (520)
T 2z7x_B 119 FLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELS 195 (520)
T ss_dssp EEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEEC
T ss_pred EEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeec
Confidence 88888888874 456777777 8888888888 666776666554 234567777777655443 56677788888
Q ss_pred ecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccccc---cccccceeeecc
Q 045493 261 YLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLG---NLSNIRGLYIRE 337 (1048)
Q Consensus 261 ~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~l~~ 337 (1048)
++++|...... ..+.+.+| .++.+++|+.|++++|.+++..+..+. .+++|+.|++++
T Consensus 196 ~l~~n~~~~~~------------------~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 256 (520)
T 2z7x_B 196 NIKCVLEDNKC------------------SYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISN 256 (520)
T ss_dssp CEEECCSTTTT------------------HHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEE
T ss_pred ccccccccccc------------------ceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeec
Confidence 88877521100 00111222 456677788888887777643222111 123444444444
Q ss_pred ccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCch-hhhhhh---cccceeeccccccC
Q 045493 338 NMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIP-QEIENM---KKLNKYLLFENQFT 413 (1048)
Q Consensus 338 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l---~~L~~l~l~~N~l~ 413 (1048)
|.+.+.+|..+... ..+++++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.
T Consensus 257 n~l~~~~p~~~~~~-------------------~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~ 315 (520)
T 2z7x_B 257 VKLQGQLDFRDFDY-------------------SGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMV 315 (520)
T ss_dssp EEEESCCCCCCCCC-------------------CSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCC
T ss_pred ccccCccccchhhc-------------------ccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccc
Confidence 44444444444000 004455555555555555 222 333333 33444444444443
Q ss_pred CCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCc--ccccCCCCCCCeeeCcCCcccCccccc
Q 045493 414 GYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNI--SEVFGIYPDLELLDLSNNNFFGEISSN 491 (1048)
Q Consensus 414 ~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~--~~~~~~~~~L~~L~Ls~n~l~~~~~~~ 491 (1048)
... .+..+++|++|++++|.+++..|..+..+++|++|++++|++++++ +..|..+++|+.|++++|++++.++.
T Consensus 316 ~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~- 392 (520)
T 2z7x_B 316 HML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK- 392 (520)
T ss_dssp CCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG-
T ss_pred ccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc-
Confidence 221 0123445555555555555555555555555555555555555432 23445555555555555555442221
Q ss_pred ccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccc
Q 045493 492 WIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELG 571 (1048)
Q Consensus 492 ~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 571 (1048)
..+..+++|++|++++|++++..+..+. ++|++|+|++|+++ .+|..+..+++|+
T Consensus 393 ----------------------~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~ 447 (520)
T 2z7x_B 393 ----------------------GDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQ 447 (520)
T ss_dssp ----------------------CSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCC
T ss_pred ----------------------chhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCC
Confidence 1244444444444444444443333332 34555555555555 4444444555555
Q ss_pred eeecccCcccccccccccccccccccccccccccc
Q 045493 572 YLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQ 606 (1048)
Q Consensus 572 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 606 (1048)
+|+|++|+|+.+++..|..+++|++|++++|+++.
T Consensus 448 ~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 448 ELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred EEECCCCcCCccCHHHhccCCcccEEECcCCCCcc
Confidence 55555555554433335555555555555555544
No 33
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-46 Score=464.22 Aligned_cols=353 Identities=18% Similarity=0.205 Sum_probs=200.0
Q ss_pred ceeecccccccc--cccccceeeeccccccCCCCcchhccCCCCeEeccCCc-ccc-CcChhhhccC-------CCcEEE
Q 045493 314 TQLSGFIPPSLG--NLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNK-LNG-SIPHCLGNLS-------NLKFFA 382 (1048)
Q Consensus 314 n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~~~~l~~l~-------~L~~L~ 382 (1048)
|.+++.+|..++ ++++|+.|+|++|.+.+.+|..|..+++|++|+|++|+ +++ .+|..+++++ +|+.|+
T Consensus 475 n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred ccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 333344444444 45555555555555444555555555555555555554 444 4444444443 555555
Q ss_pred eecccccCCchh--hhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccc-cceeEecCCc
Q 045493 383 LRENELSGSIPQ--EIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTS-LYSLRLERNQ 459 (1048)
Q Consensus 383 L~~n~l~~~~p~--~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~-L~~L~L~~n~ 459 (1048)
|++|.++ .+|. .+.++++|+.|++++|+++ .+| .+..+++|+.|++++|.++ .+|..+..+++ |++|+|++|.
T Consensus 555 Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 555 MGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp CCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred eeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCC
Confidence 5555555 4444 5555555555555555555 444 4555555666666666655 45555666666 6666666666
Q ss_pred cccCcccccCCCC--CCCeeeCcCCcccCcccccc---c--CCCCccEEEecCcccCcccCccccccCCCcEEEcccCcc
Q 045493 460 LTGNISEVFGIYP--DLELLDLSNNNFFGEISSNW---I--KCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRL 532 (1048)
Q Consensus 460 l~~~~~~~~~~~~--~L~~L~Ls~n~l~~~~~~~~---~--~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 532 (1048)
++.++ ..+...+ +|+.|+|++|++.+.+|... . .+++|+.|++++|.++...+..+..+++|+.|+|++|+|
T Consensus 631 L~~lp-~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L 709 (876)
T 4ecn_A 631 LKYIP-NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLM 709 (876)
T ss_dssp CCSCC-SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCC
T ss_pred CCcCc-hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcC
Confidence 66333 3444333 36666666666665443221 1 234677777777777733333344677777777777777
Q ss_pred cCCcCccccC-------CCccCEEeecCccccCCCccccc--cccccceeecccCccccccccccccccccccccccc--
Q 045493 533 VGQIPKQLGK-------LTSLTSLTLNGNQLSGDIPLELG--LLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSN-- 601 (1048)
Q Consensus 533 ~~~~~~~~~~-------l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~-- 601 (1048)
+...+..+.. +++|++|+|++|+++ .+|..+. .+++|+.|+|++|+|+++ |..+..+++|+.|+|++
T Consensus 710 ~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~l-p~~l~~L~~L~~L~Ls~N~ 787 (876)
T 4ecn_A 710 TSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSF-PTQPLNSSQLKAFGIRHQR 787 (876)
T ss_dssp SCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSC-CCGGGGCTTCCEEECCCCB
T ss_pred CccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCcc-chhhhcCCCCCEEECCCCC
Confidence 7333323322 227777777777777 5666665 777777777777777773 66677777777777766
Q ss_pred ----ccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEecccee
Q 045493 602 ----NQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNEL 676 (1048)
Q Consensus 602 ----N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l 676 (1048)
|++.+..+..+..+++|+.|+|++|+| +.+|..+. ++|+.|+|++|++....+..+.....+..+.+++|++
T Consensus 788 ~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 788 DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKT 863 (876)
T ss_dssp CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTT
T ss_pred CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCc
Confidence 555555555555555555555555555 34555443 4555555555555554445544444444455555543
No 34
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.7e-46 Score=408.81 Aligned_cols=246 Identities=19% Similarity=0.331 Sum_probs=187.7
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC------------
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ------------ 846 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~------------ 846 (1048)
..+.||+|+||+||+|+++ +++.||||++.............+|++.+++++|||||++++++.+.+
T Consensus 9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CE
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCc
Confidence 3457999999999999886 688999999976543333334456778889999999999999986543
Q ss_pred eEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccc
Q 045493 847 HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTA 926 (1048)
Q Consensus 847 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a 926 (1048)
..|+|||||++|+|.++++......+.++..++.++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DFGla 165 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLV 165 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccCccc
Confidence 3699999999999999998766656677788899999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC------------CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCccccc
Q 045493 927 KFLKPDSS------------NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAAN 994 (1048)
Q Consensus 927 ~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 994 (1048)
+.+..... .....+||+.|||||++.+..|+.++||||+||++|||++ ||.... .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----------~ 232 (299)
T 4g31_A 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----------E 232 (299)
T ss_dssp --------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----------H
T ss_pred eecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----------H
Confidence 87754322 1234579999999999999999999999999999999996 654211 1
Q ss_pred chhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 995 MNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.......+.....+ ...........+++.+||++||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 RVRTLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhcCCCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11122222333333 223444556778999999999999999999986
No 35
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.7e-46 Score=444.97 Aligned_cols=458 Identities=21% Similarity=0.213 Sum_probs=296.6
Q ss_pred ceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcc
Q 045493 123 VQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSE 202 (1048)
Q Consensus 123 ~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~ 202 (1048)
++|++++|.++ .+|..+. ++++.|++++|.+++..|..|.++++|++|+|++|++++..|..
T Consensus 3 ~~l~ls~n~l~----------------~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 64 (520)
T 2z7x_B 3 FLVDRSKNGLI----------------HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISV 64 (520)
T ss_dssp CEEECTTSCCS----------------SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGG
T ss_pred ceEecCCCCcc----------------ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHH
Confidence 46677777665 2333333 56666666666666666666666666666666666666666666
Q ss_pred cccccccceeccccccccccCCccCcCCCCCCeEeccCCccCC-CCCcccccccccceeecccccccCCCchhhhccchh
Q 045493 203 IGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSG-YIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSL 281 (1048)
Q Consensus 203 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L 281 (1048)
|+++++|++|+|++|+++ .+|.. .+++|++|+|++|.+++ .+|..|+.+++|++|++++|++.+ ..|
T Consensus 65 ~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~------ 132 (520)
T 2z7x_B 65 FKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSV------ 132 (520)
T ss_dssp GTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGG------
T ss_pred hhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhc------
Confidence 666666666666666666 34444 56666666666666664 245666666666666666666542 223
Q ss_pred hhhhhccccccCCCCCcccCCCCCC--cEEEccCcee--eccccccccccc-ccceeeeccccccCCCC-cchhccCCCC
Q 045493 282 KHLHVHNINKLSGSIPKEIGNLKSL--SHLWLSKTQL--SGFIPPSLGNLS-NIRGLYIRENMLYGSIP-EELGRLKSLS 355 (1048)
Q Consensus 282 ~~L~l~~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~-~~~~~l~~L~ 355 (1048)
..+++| +.|++++|.+ .+..|..+..+. ....+++++|.+.+.++ ..+..+++|+
T Consensus 133 -------------------~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~ 193 (520)
T 2z7x_B 133 -------------------LPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLE 193 (520)
T ss_dssp -------------------GGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEE
T ss_pred -------------------cccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhccccee
Confidence 333444 6666666666 555555555544 23344555565554333 3455667777
Q ss_pred eEeccCCc-------cccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccE
Q 045493 356 QLSLSVNK-------LNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTH 428 (1048)
Q Consensus 356 ~L~Ls~N~-------l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~ 428 (1048)
.|++++|. +.+.+| .++.+++|+.|++++|.+++..+..+... ...++|++
T Consensus 194 ~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~---------------------~~~~~L~~ 251 (520)
T 2z7x_B 194 LSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQL---------------------VWHTTVWY 251 (520)
T ss_dssp ECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHH---------------------HHTSSCSE
T ss_pred eccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHH---------------------hhhCcccE
Confidence 77777765 554444 56777777777777777664332222110 01124455
Q ss_pred EEeecccccCCCCCCc-----ccccccceeEecCCccccCcccccCCC---CCCCeeeCcCCcccCcccccccCCCCccE
Q 045493 429 FSVRNNNFVGPIPRSL-----QNCTSLYSLRLERNQLTGNISEVFGIY---PDLELLDLSNNNFFGEISSNWIKCPQLAT 500 (1048)
Q Consensus 429 L~l~~N~l~~~~~~~l-----~~l~~L~~L~L~~n~l~~~~~~~~~~~---~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~ 500 (1048)
|++++|.+++.+|..+ ..+++|+.+++++|.+ .++...+..+ .+|+.|++++|.+.... .+..+++|++
T Consensus 252 L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~ 328 (520)
T 2z7x_B 252 FSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLH 328 (520)
T ss_dssp EEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCE
T ss_pred EEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccE
Confidence 5555555555555555 5666666666666666 3443333222 45777777777765432 1256677888
Q ss_pred EEecCcccCcccCccccccCCCcEEEcccCcccC--CcCccccCCCccCEEeecCccccCCCcc-ccccccccceeeccc
Q 045493 501 LNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVG--QIPKQLGKLTSLTSLTLNGNQLSGDIPL-ELGLLAELGYLDLSA 577 (1048)
Q Consensus 501 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~ 577 (1048)
|++++|.+++..|..++.+++|++|++++|++++ ..|..+..+++|++|++++|.+++.+|. .+..+++|++|++++
T Consensus 329 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~ 408 (520)
T 2z7x_B 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSS 408 (520)
T ss_dssp EECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCS
T ss_pred EEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcC
Confidence 8888888877777777888888888888888875 4456677888888888888888864555 477788888888888
Q ss_pred CcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCcc
Q 045493 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIP 657 (1048)
Q Consensus 578 N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 657 (1048)
|++++..|..+. ++|++|++++|+|+.++ ..+..+++|++|+|++|+|++..+..+..+++|++|++++|++++..+
T Consensus 409 N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip-~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 409 NILTDTIFRCLP--PRIKVLDLHSNKIKSIP-KQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp SCCCGGGGGSCC--TTCCEEECCSSCCCCCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCcchhhhhc--ccCCEEECCCCcccccc-hhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 888776666654 68888899999888544 444488999999999999995433448899999999999999987654
No 36
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.4e-46 Score=460.26 Aligned_cols=457 Identities=17% Similarity=0.216 Sum_probs=322.5
Q ss_pred CCcEEecCCCccccccCCCCCCCCCcceeec-cccCccccCCcccccc----cccc--eeccc----------ccc----
Q 045493 160 SPVSVSLHTNNFSGVIPRSLGGLKNLTFVYL-NNNRIVGSIPSEIGNL----RSLS--YLGLN----------KNQ---- 218 (1048)
Q Consensus 160 ~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L-~~n~i~~~~p~~~~~l----~~L~--~L~L~----------~n~---- 218 (1048)
....|+|++|.+.|.+|..|+.|++|++|+| ++|.+++..|-..... ...+ .+... ...
T Consensus 324 ~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l 403 (876)
T 4ecn_A 324 RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDL 403 (876)
T ss_dssp CEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHH
T ss_pred CEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHH
Confidence 4566777777777777777777777777777 6666655432111000 0000 00000 000
Q ss_pred -------ccccCCccCcCCCCCCeEeccC--CccCCCCCcccccccccceeecccccccC-----------------CCc
Q 045493 219 -------LSGSIPPTAGNLSNLKFLYLHD--NRLSGYIPPKLGSFKSLLYLYLSHNQLNG-----------------SLP 272 (1048)
Q Consensus 219 -------l~~~~~~~~~~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~p 272 (1048)
.....+........++.+.+.. |.+++ +|..|+++++|++|+|++|++++ .+|
T Consensus 404 ~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 404 LQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 0000111112233444444543 77775 67777777778888888777776 267
Q ss_pred hhhh--ccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCce-eec-cccccccccc-------ccceeeecccccc
Q 045493 273 SSFG--NLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQ-LSG-FIPPSLGNLS-------NIRGLYIRENMLY 341 (1048)
Q Consensus 273 ~~~~--~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l~-------~L~~L~l~~n~l~ 341 (1048)
..++ ++++|++|++++ |.+.+.+|..++++++|+.|+|++|+ +++ .+|..++.++ +|+.|++++|.+.
T Consensus 483 ~~l~f~~L~~L~~L~Ls~-N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 483 EELSWSNLKDLTDVELYN-CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp SCCCGGGCTTCCEEEEES-CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred hhhhhccCCCCCEEECcC-CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 7766 888888888876 66677888888888888888888887 887 7777776665 8899999999888
Q ss_pred CCCCc--chhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcc-cceeeccccccCCCCCc
Q 045493 342 GSIPE--ELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKK-LNKYLLFENQFTGYLPQ 418 (1048)
Q Consensus 342 ~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~l~l~~N~l~~~~~~ 418 (1048)
.+|. .+..+++|++|+|++|+++ .+| .|+++++|+.|+|++|.++ .+|..+..+++ |+.|++++|+++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 6777 8888899999999999888 677 8888889999999999988 78888888888 999999999888 6677
Q ss_pred ccccCCc--ccEEEeecccccCCCCCCc---c--cccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCccccc
Q 045493 419 NVCQSGS--LTHFSVRNNNFVGPIPRSL---Q--NCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSN 491 (1048)
Q Consensus 419 ~~~~~~~--L~~L~l~~N~l~~~~~~~l---~--~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~ 491 (1048)
.+..... |+.|++++|.+.+.+|... . .+++|+.|+|++|+++.++...+..+++|+.|+|++|+++......
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~ 716 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENS 716 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTS
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHH
Confidence 6666544 9999999999988766432 2 3458999999999999888888888899999999999998544444
Q ss_pred ccC-------CCCccEEEecCcccCcccCcccc--ccCCCcEEEcccCcccCCcCccccCCCccCEEeecC------ccc
Q 045493 492 WIK-------CPQLATLNMGGNEISGTIPSEIG--NMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNG------NQL 556 (1048)
Q Consensus 492 ~~~-------~~~L~~L~L~~N~i~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~------N~l 556 (1048)
+.. +++|++|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++
T Consensus 717 ~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l 794 (876)
T 4ecn_A 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRI 794 (876)
T ss_dssp SSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBC
T ss_pred hccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccc
Confidence 433 338999999999999 6788876 89999999999999997 788899999999999987 555
Q ss_pred cCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcc
Q 045493 557 SGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSL 628 (1048)
Q Consensus 557 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 628 (1048)
.+.+|..+..+++|++|+|++|+|+.+ |..+. ++|+.|+|++|++..+....+.....+..+.|++|.+
T Consensus 795 ~~~ip~~l~~L~~L~~L~Ls~N~L~~I-p~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 795 LRQWPTGITTCPSLIQLQIGSNDIRKV-DEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKT 863 (876)
T ss_dssp CCCCCTTGGGCSSCCEEECCSSCCCBC-CSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTT
T ss_pred cccChHHHhcCCCCCEEECCCCCCCcc-CHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCc
Confidence 555566666666666666666666332 33333 3555555555555554444444444444445555444
No 37
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.9e-43 Score=432.48 Aligned_cols=519 Identities=20% Similarity=0.188 Sum_probs=375.6
Q ss_pred CCCccCCCCCCCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcC
Q 045493 150 SIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGN 229 (1048)
Q Consensus 150 ~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 229 (1048)
.+|..+. .++++|+|++|+++++.+.+|.++++|++|+|++|+|+++.|++|.++++|++|+|++|++++..+..|.+
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~ 122 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 122 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcC
Confidence 4454442 35667777777777777777777777777777777777766777777777777777777777655566777
Q ss_pred CCCCCeEeccCCccCCCCCcccccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEE
Q 045493 230 LSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHL 309 (1048)
Q Consensus 230 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L 309 (1048)
+++|++|+|++|++++..+..|+++++|++|++++|.+... ..|..++.+++|++|
T Consensus 123 L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~------------------------~~~~~~~~l~~L~~L 178 (635)
T 4g8a_A 123 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF------------------------KLPEYFSNLTNLEHL 178 (635)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC------------------------CCCGGGGGCTTCCEE
T ss_pred CCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccC------------------------CCchhhccchhhhhh
Confidence 77777777777777766566677777777777777776532 123344445555555
Q ss_pred EccCceeecccccccccccccc----eeeeccccccCCCCcchhccCCCCeEeccCCcccc-CcChhhhccCCCcEEEee
Q 045493 310 WLSKTQLSGFIPPSLGNLSNIR----GLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNG-SIPHCLGNLSNLKFFALR 384 (1048)
Q Consensus 310 ~L~~n~l~~~~~~~~~~l~~L~----~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~L~ 384 (1048)
++++|++++..+..|..+.+++ .++++.|.+....+..+ ....++.+++++|.... ..+..+..++.++...+.
T Consensus 179 ~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~ 257 (635)
T 4g8a_A 179 DLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLV 257 (635)
T ss_dssp ECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEE
T ss_pred cccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCccccccccc
Confidence 5555555555555555444433 34555555553333322 23344556666554432 223445566666655554
Q ss_pred cccc------cCCchhhhhhhcccceeeccccccCCC---CCcccccCCcccEEEeecccccCCCCCCcccccccceeEe
Q 045493 385 ENEL------SGSIPQEIENMKKLNKYLLFENQFTGY---LPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRL 455 (1048)
Q Consensus 385 ~n~l------~~~~p~~~~~l~~L~~l~l~~N~l~~~---~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L 455 (1048)
.+.. .......+..+..+....+..+..... .+..+.....++.+++.++.+.... .+....+++.|++
T Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l 335 (635)
T 4g8a_A 258 LGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLEL 335 (635)
T ss_dssp EECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEE
T ss_pred ccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhc
Confidence 3322 222334445555555555444433221 2233455677888888888877543 3566678999999
Q ss_pred cCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCc--ccCccccccCCCcEEEcccCccc
Q 045493 456 ERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISG--TIPSEIGNMTQLHKLDFSSNRLV 533 (1048)
Q Consensus 456 ~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~Ls~N~l~ 533 (1048)
.+|.+..+... .++.|+.+++++|.+... ..+..+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+.
T Consensus 336 ~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~ 410 (635)
T 4g8a_A 336 VNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI 410 (635)
T ss_dssp ESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE
T ss_pred ccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc
Confidence 99998877654 356788999999987643 345578999999999999973 34566778899999999999987
Q ss_pred CCcCccccCCCccCEEeecCccccCCC-ccccccccccceeecccCcccccccccccccccccccccccccc-cchhhhh
Q 045493 534 GQIPKQLGKLTSLTSLTLNGNQLSGDI-PLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQF-SQEISIQ 611 (1048)
Q Consensus 534 ~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l-~~~~~~~ 611 (1048)
..+..+..+++|+.+++++|...... +..+..+++++.++++.|++....+..+..++.|+.|+|++|++ ....+..
T Consensus 411 -~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~ 489 (635)
T 4g8a_A 411 -TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 489 (635)
T ss_dssp -EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSC
T ss_pred -cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchh
Confidence 45667889999999999998877554 45688999999999999999999999999999999999999985 4456778
Q ss_pred hccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCCcc-cc-ccc
Q 045493 612 IGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSK-AF-QNA 689 (1048)
Q Consensus 612 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~~-~~-~~~ 689 (1048)
|..+++|++|||++|+|++..|..|..+++|++|+|++|+|++.++..|..+++|++||+++|++++.+|..- .+ ...
T Consensus 490 ~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L 569 (635)
T 4g8a_A 490 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSL 569 (635)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTC
T ss_pred hhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988642 22 334
Q ss_pred ccccccCCccccCC
Q 045493 690 TIEAFQGNKELCGD 703 (1048)
Q Consensus 690 ~~~~~~~n~~lc~~ 703 (1048)
..-.+.+|+..|.+
T Consensus 570 ~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 570 AFLNLTQNDFACTC 583 (635)
T ss_dssp CEEECTTCCBCCSG
T ss_pred CEEEeeCCCCcccC
Confidence 55568899999874
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.4e-44 Score=430.63 Aligned_cols=444 Identities=20% Similarity=0.204 Sum_probs=255.9
Q ss_pred CCCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEec
Q 045493 159 ESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYL 238 (1048)
Q Consensus 159 ~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 238 (1048)
++++.|++++|.+++..|..|..+++|++|+|++|+++++.|++|.++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 44555555555555555555555555555555555555555555555555555555555555 33333 4555555555
Q ss_pred cCCccCCC-CCcccccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCC--cEEEccCce
Q 045493 239 HDNRLSGY-IPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSL--SHLWLSKTQ 315 (1048)
Q Consensus 239 ~~N~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L--~~L~L~~n~ 315 (1048)
++|++++. .|..|+++++|++|++++|++.. ..+..+++| +.|++++|.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~----------------------------~~~~~l~~L~L~~L~L~~n~ 180 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ----------------------------LDLLPVAHLHLSCILLDLVS 180 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT----------------------------TTTGGGTTSCEEEEEEEESS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCcccc----------------------------CchhhhhhceeeEEEeeccc
Confidence 55555532 23455555555555555555432 122233333 777777777
Q ss_pred e--eccccccccccc--ccceeeeccccccCCCCc-chhccCCCCeEeccCCc-----cccCcChhhhccCCCcEEEeec
Q 045493 316 L--SGFIPPSLGNLS--NIRGLYIRENMLYGSIPE-ELGRLKSLSQLSLSVNK-----LNGSIPHCLGNLSNLKFFALRE 385 (1048)
Q Consensus 316 l--~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~-----l~~~~~~~l~~l~~L~~L~L~~ 385 (1048)
+ ++..|..+..+. .+ .+++++|.+.+.++. .+..+++|+.|++++|+ +. .....+..+++|+.+++++
T Consensus 181 l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~-~~~~~l~~l~~L~~L~L~~ 258 (562)
T 3a79_B 181 YHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLM-TFLSELTRGPTLLNVTLQH 258 (562)
T ss_dssp CCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHH-HHHHHHHSCSSCEEEEEEE
T ss_pred ccccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHH-HHHHHHhccCcceEEEecC
Confidence 7 666666666543 22 446666666554443 34566777777777764 22 1223466677777777777
Q ss_pred ccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCc-----ccccccceeEecCCcc
Q 045493 386 NELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSL-----QNCTSLYSLRLERNQL 460 (1048)
Q Consensus 386 n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l-----~~l~~L~~L~L~~n~l 460 (1048)
+.+++.....+. .. ....+|++|++++|.+++.+|..+ ..++.|+.++++.|.+
T Consensus 259 ~~l~~~~~~~~~--------------------~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~ 317 (562)
T 3a79_B 259 IETTWKCSVKLF--------------------QF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF 317 (562)
T ss_dssp EEECHHHHHHHH--------------------HH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC
T ss_pred CcCcHHHHHHHH--------------------Hh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee
Confidence 666532111110 00 112356666666666666666555 4555555555555554
Q ss_pred ccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccc
Q 045493 461 TGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQL 540 (1048)
Q Consensus 461 ~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 540 (1048)
.++.+.+..+ ....+|++|++++|.+.... ....+++|++|++++|++++..|..+
T Consensus 318 -~~p~~~~~~~---------------------~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~ 373 (562)
T 3a79_B 318 -LFSKEALYSV---------------------FAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGC 373 (562)
T ss_dssp -SSCHHHHHHH---------------------HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTC
T ss_pred -ecChhhhhhh---------------------hccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhh
Confidence 2222211111 01123444444444443211 11445556666666666665555566
Q ss_pred cCCCccCEEeecCccccCC--CccccccccccceeecccCcccc-cccccccccccccccccccccccchhhhhhccccc
Q 045493 541 GKLTSLTSLTLNGNQLSGD--IPLELGLLAELGYLDLSANRLSK-LIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQ 617 (1048)
Q Consensus 541 ~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 617 (1048)
..+++|++|+|++|++++. +|..+..+++|++|++++|++++ +++..+..+++|++|++++|+|++..+..+. ++
T Consensus 374 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~ 451 (562)
T 3a79_B 374 STLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PK 451 (562)
T ss_dssp CSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TT
T ss_pred cccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--Cc
Confidence 6666666666666666542 23446666666666666666666 4444566667777777777777654443332 57
Q ss_pred cCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCCc
Q 045493 618 LSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683 (1048)
Q Consensus 618 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~ 683 (1048)
|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+..++.|++|++++|+|+|.+|..
T Consensus 452 L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 452 VKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp CSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred CCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 888899999888 67776678899999999999998555555888999999999999999887753
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.1e-43 Score=428.01 Aligned_cols=464 Identities=22% Similarity=0.238 Sum_probs=291.0
Q ss_pred CCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccccccc
Q 045493 23 FPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELA 102 (1048)
Q Consensus 23 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~ 102 (1048)
....+++|+++|++++ +|..+. ++|++|+|++|.|+++.|.+|+.+++|++|+|++|+|+++.|++|.++++|++|+
T Consensus 30 ~~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 106 (562)
T 3a79_B 30 NELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLD 106 (562)
T ss_dssp ---CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEE
Confidence 3444667777777763 444443 5667777777777665556667777777777777776666666666666666666
Q ss_pred ccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCC
Q 045493 103 LSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGL 182 (1048)
Q Consensus 103 l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l 182 (1048)
+++|+++ .+|.. .+++|++|++++|++++. ..|..|..+
T Consensus 107 Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l--------------------------------------~~p~~~~~l 145 (562)
T 3a79_B 107 VSHNRLQ-NISCC--PMASLRHLDLSFNDFDVL--------------------------------------PVCKEFGNL 145 (562)
T ss_dssp CTTSCCC-EECSC--CCTTCSEEECCSSCCSBC--------------------------------------CCCGGGGGC
T ss_pred CCCCcCC-ccCcc--ccccCCEEECCCCCcccc--------------------------------------CchHhhccc
Confidence 6666666 34433 566666666666655421 123556666
Q ss_pred CCcceeeccccCccccCCccccccccc--ceeccccccc--cccCCccCcCCC-CCCeEeccCCccCCCCCc-ccccccc
Q 045493 183 KNLTFVYLNNNRIVGSIPSEIGNLRSL--SYLGLNKNQL--SGSIPPTAGNLS-NLKFLYLHDNRLSGYIPP-KLGSFKS 256 (1048)
Q Consensus 183 ~~L~~L~L~~n~i~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~ 256 (1048)
++|++|++++|++++. .+..+++| ++|+|++|++ .+..|..+..+. ..-.+++++|.+.+.+++ .+..+++
T Consensus 146 ~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~ 222 (562)
T 3a79_B 146 TKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGH 222 (562)
T ss_dssp TTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEE
T ss_pred CcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccce
Confidence 7777777777766542 34444444 7777777776 556666665543 111456677777655443 4566778
Q ss_pred cceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccc---ccccccccee
Q 045493 257 LLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPS---LGNLSNIRGL 333 (1048)
Q Consensus 257 L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~l~~L~~L 333 (1048)
|+.|++++|+.. -..+ . .....+..+++|+.|+++++.+++..... ....++|+.|
T Consensus 223 L~~L~l~~n~~~---~~~l-----------------~-~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L 281 (562)
T 3a79_B 223 LQLSNIKLNDEN---CQRL-----------------M-TFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYL 281 (562)
T ss_dssp EEEEEEECCSTT---HHHH-----------------H-HHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEE
T ss_pred EEEecccccccc---cchH-----------------H-HHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEE
Confidence 888888877521 0000 0 00112344556666666666554321110 0112355666
Q ss_pred eeccccccCCCCcch-----hccCCCCeEeccCCccccCcC-hhhhccCCCcEEEeecccccCCchhhhhhhcccceeec
Q 045493 334 YIRENMLYGSIPEEL-----GRLKSLSQLSLSVNKLNGSIP-HCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLL 407 (1048)
Q Consensus 334 ~l~~n~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l 407 (1048)
++++|.+.+.+|..+ ..++.|+.++++.|.+ .+| ..+..+ ....+|+.|++
T Consensus 282 ~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~---------------------~~~~~L~~L~l 338 (562)
T 3a79_B 282 NIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSV---------------------FAEMNIKMLSI 338 (562)
T ss_dssp EEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHH---------------------HHTCCCSEEEE
T ss_pred EEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhh---------------------hccCcceEEEc
Confidence 666666555555544 3344444444444443 122 222221 00133444444
Q ss_pred cccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCc--ccccCCCCCCCeeeCcCCccc
Q 045493 408 FENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNI--SEVFGIYPDLELLDLSNNNFF 485 (1048)
Q Consensus 408 ~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~--~~~~~~~~~L~~L~Ls~n~l~ 485 (1048)
++|.+.... ....+++|++|++++|.+++..|..+..+++|++|++++|++++++ +..|..+++|+.|++++|+++
T Consensus 339 ~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~ 416 (562)
T 3a79_B 339 SDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN 416 (562)
T ss_dssp ESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCB
T ss_pred cCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCC
Confidence 444443221 1145667888888888888778888888888888888888888765 356788888999999999988
Q ss_pred C-cccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccc-
Q 045493 486 G-EISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLE- 563 (1048)
Q Consensus 486 ~-~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~- 563 (1048)
+ .....+..+++|++|++++|.+++..|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+++ .+|..
T Consensus 417 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~ 492 (562)
T 3a79_B 417 SHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGV 492 (562)
T ss_dssp SCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTS
T ss_pred CccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHH
Confidence 7 4445677888999999999998877666554 78999999999998 56666668999999999999999 45554
Q ss_pred cccccccceeecccCccccc
Q 045493 564 LGLLAELGYLDLSANRLSKL 583 (1048)
Q Consensus 564 ~~~l~~L~~L~Ls~N~l~~~ 583 (1048)
+..+++|++|++++|.+...
T Consensus 493 ~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 493 FDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp TTTCTTCCCEECCSCCBCCC
T ss_pred HhcCCCCCEEEecCCCcCCC
Confidence 88899999999999998754
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-43 Score=396.27 Aligned_cols=259 Identities=19% Similarity=0.274 Sum_probs=192.9
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeee------CCeEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSH------TQHLFL 850 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~------~~~~~l 850 (1048)
.....||+|+||+||+|++. +|+.||||++....... ......+|++.++.++|||||++++++.. .+..|+
T Consensus 57 ~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~i 136 (398)
T 4b99_A 57 EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYV 136 (398)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEE
Confidence 34567999999999999886 78999999997543322 12233457777889999999999998753 367899
Q ss_pred EEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccC
Q 045493 851 VYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK 930 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~ 930 (1048)
|||||+ |+|.+++... ..+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 137 vmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 137 VLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 999996 6899999653 3589999999999999999999999 99999999999999999999999999998764
Q ss_pred CC----CCCccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCcccccc-
Q 045493 931 PD----SSNWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAANM- 995 (1048)
Q Consensus 931 ~~----~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~~- 995 (1048)
.. .......+||+.|||||++.+. .|+.++||||+||++|||++|+.||...+... +.+......
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 33 2234567899999999998875 46999999999999999999999997533210 011000000
Q ss_pred --hhhhh---hhccCCCCCCchh-HHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 996 --NIVVN---DLIDSRLPPPLGE-VEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 996 --~~~~~---~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
..... .......+.++.. ......++.+++.+||+.||++|||++|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000 0011111111110 0112356889999999999999999999986
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.2e-43 Score=390.42 Aligned_cols=193 Identities=23% Similarity=0.304 Sum_probs=160.7
Q ss_pred cCCcceeeecccccccEEEEEEc----CCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEE
Q 045493 776 TFEGKMVLHGTGGCGTVYKAELT----SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFL 850 (1048)
Q Consensus 776 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~l 850 (1048)
+.+.-...||+|+||+||+|+.+ +++.||+|++..... .....++++.+..+ +|||||++++++.+.++.|+
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~---~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l 97 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH---PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI 97 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC---HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC---HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence 33445567999999999999864 457899999865332 22344566666666 69999999999999999999
Q ss_pred EEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC-CceEEecccccccc
Q 045493 851 VYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE-YKAHVSDFGTAKFL 929 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~-~~~kl~DfG~a~~~ 929 (1048)
||||+++|+|.++++ .+++.+++.++.|++.||+|||++ +||||||||+|||++.+ +.+||+|||+|+..
T Consensus 98 vmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 98 AMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 999999999999984 278899999999999999999999 99999999999999877 89999999999865
Q ss_pred CCCC----------------------------CCccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCc
Q 045493 930 KPDS----------------------------SNWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGH 980 (1048)
Q Consensus 930 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~ 980 (1048)
.... ......+||+.|||||++.+. .|+.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 4321 112345799999999999875 48999999999999999999999985
No 42
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.3e-42 Score=407.38 Aligned_cols=245 Identities=20% Similarity=0.234 Sum_probs=193.2
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCC--cccc---hhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG--EIGI---NQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYE 853 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~---~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 853 (1048)
...+||+|+||.||+|+.+ +++.||+|++.+.... .... .++.++..++.++|||||+++++|.+.+.+|+|||
T Consensus 193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmE 272 (689)
T 3v5w_A 193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD 272 (689)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEe
Confidence 4457999999999999886 6889999998653211 1111 12223444566789999999999999999999999
Q ss_pred ccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC
Q 045493 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS 933 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 933 (1048)
||+||+|.+++.+.+ .+++..++.++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+.+...
T Consensus 273 y~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~- 345 (689)
T 3v5w_A 273 LMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK- 345 (689)
T ss_dssp CCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCCC-
Confidence 999999999997643 489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493 934 SNWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus 934 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
.....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||..... .................+
T Consensus 346 -~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~--------~~~~~i~~~i~~~~~~~p-- 414 (689)
T 3v5w_A 346 -KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--------KDKHEIDRMTLTMAVELP-- 414 (689)
T ss_dssp -CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC--------CCHHHHHHHHHHCCCCCC--
T ss_pred -CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHhhcCCCCCCC--
Confidence 3345789999999999964 5799999999999999999999999864321 111122222222222221
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 045493 1013 EVEEKLKSMIAVAFLCLDANPDCRPT-----MQKVCN 1044 (1048)
Q Consensus 1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 1044 (1048)
...+.++.+++.+||++||++|++ ++|+++
T Consensus 415 --~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 --DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp --TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred --ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 123456788999999999999998 677764
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=9.9e-42 Score=405.33 Aligned_cols=247 Identities=18% Similarity=0.274 Sum_probs=202.4
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||+||+|+++ +|+.||+|++....... .....++++.++.++|||||+++++|.+.+..|+|||||+||
T Consensus 161 i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~-~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg 239 (573)
T 3uto_A 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD-KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG 239 (573)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH-HHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhh-HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCC
Confidence 3456899999999999886 68899999986543222 233456777889999999999999999999999999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC--CceEEeccccccccCCCCCCc
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE--YKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~--~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|.+++... ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+... ...
T Consensus 240 ~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-~~~ 313 (573)
T 3uto_A 240 ELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSV 313 (573)
T ss_dssp BHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT-SEE
T ss_pred cHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC-Cce
Confidence 999999643 23588999999999999999999999 99999999999999864 89999999999987543 334
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+.......+......
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~-----------~~~~~~~i~~~~~~~~~~~~~~ 382 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-----------DDETLRNVKSCDWNMDDSAFSG 382 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-----------HHHHHHHHHTTCCCCCSGGGTT
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----------HHHHHHHHHhCCCCCCcccccC
Confidence 56789999999999999999999999999999999999999986432 1222333333333322223334
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...++.+++.+||+.||++|||++|+++
T Consensus 383 ~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 383 ISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 4566889999999999999999999987
No 44
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.3e-40 Score=388.92 Aligned_cols=367 Identities=20% Similarity=0.221 Sum_probs=283.9
Q ss_pred CCCcEEEccCceeecccccccccccccceeeeccccccCCC-CcchhccCCCCeEeccCCccccCcChhhhccCCCcEEE
Q 045493 304 KSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSI-PEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFA 382 (1048)
Q Consensus 304 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 382 (1048)
++|++|+|++|.+++..|..|+.+++|+.|++++|.+.+.+ +..|..+++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 57888888888888777888888888888888888776433 56788888888888888888877788888888888888
Q ss_pred eecccccCCchhh--hhhhcccceeeccccccCCCCCcc-cccCCcccEEEeecccccCCCCCCcccc--cccceeEecC
Q 045493 383 LRENELSGSIPQE--IENMKKLNKYLLFENQFTGYLPQN-VCQSGSLTHFSVRNNNFVGPIPRSLQNC--TSLYSLRLER 457 (1048)
Q Consensus 383 L~~n~l~~~~p~~--~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~L~~L~l~~N~l~~~~~~~l~~l--~~L~~L~L~~ 457 (1048)
|++|.+++..+.. +..+++|+.|++++|++++..|.. +..+++|++|++++|.+++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 8888888755555 777788888888888887776665 6677777777777777777777777665 5777777777
Q ss_pred CccccCcccccC--------CCCCCCeeeCcCCcccCcccccccCC---CCccEEEecCcccCcccCccccccCCCcEEE
Q 045493 458 NQLTGNISEVFG--------IYPDLELLDLSNNNFFGEISSNWIKC---PQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526 (1048)
Q Consensus 458 n~l~~~~~~~~~--------~~~~L~~L~Ls~n~l~~~~~~~~~~~---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 526 (1048)
|.+.++....+. .+++|+.|++++|++++..+..+... ++|+.|++++|.+.+..
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-------------- 255 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS-------------- 255 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------------
Confidence 777765544322 33555666666665555444444322 45555555555544221
Q ss_pred cccCcccCCcCccccC--CCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccc
Q 045493 527 FSSNRLVGQIPKQLGK--LTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQF 604 (1048)
Q Consensus 527 Ls~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l 604 (1048)
+..+.+.+..+..+.. .++|++|++++|.+++..|..++.+++|++|+|++|+++++.|..|..+++|++|+|++|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 256 FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 1112222222333333 36899999999999988888899999999999999999998888999999999999999999
Q ss_pred cchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCCcc
Q 045493 605 SQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSK 684 (1048)
Q Consensus 605 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~~ 684 (1048)
+++.+..+..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..++.|++|++++|+++|.+|...
T Consensus 336 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 99888899999999999999999998889999999999999999999998888889999999999999999999999643
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.2e-40 Score=389.08 Aligned_cols=379 Identities=20% Similarity=0.214 Sum_probs=249.7
Q ss_pred EEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCcccc-CCCcCCCCCCCCcEEeCCCC
Q 045493 4 INLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSG-IIPPQIGILTNLVVLRLSVN 82 (1048)
Q Consensus 4 ~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~-~~p~~~~~l~~L~~L~ls~n 82 (1048)
+++++.+ ++++|. .++++++|||++|+|++..|..|+.+++|++|+|++|.+.+ +.|.+|.++++|++|+|++|
T Consensus 15 ~~c~~~~----l~~lp~-l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 15 AICINRG----LHQVPE-LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp EECCSSC----CSSCCC-CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred cCcCCCC----cccCCC-CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 4444443 345554 55777777777777777677777777777777777777753 33566777777777777777
Q ss_pred cCCCCCccccccccccccccccceecccccCc--CcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCC
Q 045493 83 QLNGLIPEELGELTSLNELALSYNRLNGSIPA--SLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLES 160 (1048)
Q Consensus 83 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~--~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~ 160 (1048)
++++..|..|.++++|++|++++|++++..|. .|+.+++|++|++++|++.+
T Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------------- 143 (455)
T 3v47_A 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKK-------------------------- 143 (455)
T ss_dssp TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCS--------------------------
T ss_pred ccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCc--------------------------
Confidence 77776677777777777777777777653333 36666677777776666653
Q ss_pred CcEEecCCCccccccCCC-CCCCCCcceeeccccCccccCCcccccc--cccceeccccccccccCCcc--------CcC
Q 045493 161 PVSVSLHTNNFSGVIPRS-LGGLKNLTFVYLNNNRIVGSIPSEIGNL--RSLSYLGLNKNQLSGSIPPT--------AGN 229 (1048)
Q Consensus 161 L~~l~l~~n~~~~~~~~~-~~~l~~L~~L~L~~n~i~~~~p~~~~~l--~~L~~L~L~~n~l~~~~~~~--------~~~ 229 (1048)
..|.. |..+++|++|++++|++++..|..+..+ .+|++|++++|.+.+..+.. +..
T Consensus 144 -------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~ 210 (455)
T 3v47_A 144 -------------IQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFK 210 (455)
T ss_dssp -------------CCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTT
T ss_pred -------------cCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccc
Confidence 33333 5666667777777777666666666655 56677777777766433322 235
Q ss_pred CCCCCeEeccCCccCCCCCcccccc---cccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCC--CC
Q 045493 230 LSNLKFLYLHDNRLSGYIPPKLGSF---KSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGN--LK 304 (1048)
Q Consensus 230 l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~--l~ 304 (1048)
+++|++|++++|.+++..|..+..+ ++|+.|++++|.+.+.... . +.+....+..+.. .+
T Consensus 211 ~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~ 275 (455)
T 3v47_A 211 NTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFG-H--------------TNFKDPDNFTFKGLEAS 275 (455)
T ss_dssp TCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTT-C--------------CSSCCCCTTTTGGGTTS
T ss_pred cceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccc-h--------------hhhccCccccccccccc
Confidence 5677777777777776666655444 6777777777765532110 0 1122122222222 35
Q ss_pred CCcEEEccCceeecccccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEee
Q 045493 305 SLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALR 384 (1048)
Q Consensus 305 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 384 (1048)
+|+.|++++|.+++..|..|+.+++|+.|++++|.+.+..|..|..+++|++|+|++|.+++..|..+.++++|++|+|+
T Consensus 276 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 355 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLS 355 (455)
T ss_dssp CCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECC
T ss_pred CceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECC
Confidence 78888888888887777788888888888888888877777777788888888888888876667777777888888888
Q ss_pred cccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCC
Q 045493 385 ENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIP 441 (1048)
Q Consensus 385 ~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 441 (1048)
+|++++..|..+..+++|+.|++++|++++..+..+..+++|++|++++|.+++..|
T Consensus 356 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 356 YNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 777776666667666666666666666665544445555555555555555554433
No 46
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.9e-40 Score=369.61 Aligned_cols=280 Identities=34% Similarity=0.548 Sum_probs=216.8
Q ss_pred CcchhhhcccCCcceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC
Q 045493 767 NNQELLSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ 846 (1048)
Q Consensus 767 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 846 (1048)
...++....+.+.....||+|+||.||+|+..+++.||||++..............++..++.++||||+++++++...+
T Consensus 21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 100 (326)
T 3uim_A 21 SLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 100 (326)
T ss_dssp CTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSS
T ss_pred cHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCC
Confidence 44455555555566677999999999999988899999999976554444445566777788899999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhccc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccc
Q 045493 847 HLFLVYEYLERGSLATILSNEA-TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGT 925 (1048)
Q Consensus 847 ~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~ 925 (1048)
..++||||+++|+|.++++... ....+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||+|||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 180 (326)
T 3uim_A 101 ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180 (326)
T ss_dssp CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSS
T ss_pred ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCcc
Confidence 9999999999999999997643 334589999999999999999999998666899999999999999999999999999
Q ss_pred ccccCCCCCC-ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcc------cccchhh
Q 045493 926 AKFLKPDSSN-WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAP------AANMNIV 998 (1048)
Q Consensus 926 a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~------~~~~~~~ 998 (1048)
++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||+........... .......
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T 3uim_A 181 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 260 (326)
T ss_dssp CEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCC
T ss_pred ccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchh
Confidence 9876543332 34456999999999999888999999999999999999999998643211110000 0000111
Q ss_pred hhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 999 VNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
.....+...... ........+.+++.+||+.||++|||++||+++|++
T Consensus 261 ~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 261 LEALVDVDLQGN--YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp STTSSCTTCTTS--CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hhhhcChhhccc--cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 112222222221 235667789999999999999999999999999974
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=6.6e-40 Score=381.19 Aligned_cols=390 Identities=25% Similarity=0.318 Sum_probs=249.9
Q ss_pred CCCCCeEeccCCccCCCCCcccccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEE
Q 045493 230 LSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHL 309 (1048)
Q Consensus 230 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L 309 (1048)
.++|++|++++|.+ +.+|..++++++|++|++++|.+.+.+|..++.+.+|+.+++..|.. .++++|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~------------~~l~~L 76 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD------------RQAHEL 76 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH------------HTCSEE
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc------------cCCCEE
Confidence 46777777777777 46777778888888888888887777788888888877777765421 467788
Q ss_pred EccCceeecccccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeeccccc
Q 045493 310 WLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELS 389 (1048)
Q Consensus 310 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~ 389 (1048)
++++|.+++. |.. .++|+.|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|+++
T Consensus 77 ~l~~~~l~~l-p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 77 ELNNLGLSSL-PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLE 144 (454)
T ss_dssp ECTTSCCSCC-CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCS
T ss_pred EecCCccccC-CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCC
Confidence 8888887753 332 3677888888888876 5543 3678888888888874 2321 157888888888887
Q ss_pred CCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccC
Q 045493 390 GSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFG 469 (1048)
Q Consensus 390 ~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~ 469 (1048)
+ +| .++++++|+.|++++|++++ +|..+ .+|++|++++|.+++ +| .+..+++|++|++++|++++++..
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~--- 213 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDL--- 213 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCC---
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCC---
Confidence 5 55 47888888888888888876 44332 478888888888886 44 578888888888888888765432
Q ss_pred CCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEE
Q 045493 470 IYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSL 549 (1048)
Q Consensus 470 ~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 549 (1048)
.++|+.|++++|.++ .+| .+..+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|++|
T Consensus 214 -~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L 282 (454)
T 1jl5_A 214 -PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFL 282 (454)
T ss_dssp -CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEE
T ss_pred -cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEE
Confidence 257888888888887 444 37788888888888888874 3432 4778888888888875 4433 3678888
Q ss_pred eecCccccCCCccccccccccceeecccCccccccccccccc-ccccccccccccccchhhhhhccccccCeEECCCCcc
Q 045493 550 TLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGEL-RKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSL 628 (1048)
Q Consensus 550 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 628 (1048)
++++|++++. |. ..++|++|++++|+++++. .+ ++|++|++++|+++++.. .+++|++|++++|++
T Consensus 283 ~ls~N~l~~l-~~---~~~~L~~L~l~~N~l~~i~-----~~~~~L~~L~Ls~N~l~~lp~----~~~~L~~L~L~~N~l 349 (454)
T 1jl5_A 283 DVSENIFSGL-SE---LPPNLYYLNASSNEIRSLC-----DLPPSLEELNVSNNKLIELPA----LPPRLERLIASFNHL 349 (454)
T ss_dssp ECCSSCCSEE-SC---CCTTCCEEECCSSCCSEEC-----CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCC
T ss_pred ECcCCccCcc-cC---cCCcCCEEECcCCcCCccc-----CCcCcCCEEECCCCccccccc----cCCcCCEEECCCCcc
Confidence 8888888752 21 1257888888888887642 22 478888888888876432 257888888888888
Q ss_pred cCcCCcCcCCccccCeEECCCCcccC--Ccccccccc-------------CCccEEEeccceecC--CCCCc
Q 045493 629 GGNIPSEICNLESLEYMNLLQNKLSG--PIPSCFRRM-------------HGLSSIDVSYNELQG--SIPHS 683 (1048)
Q Consensus 629 ~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l-------------~~L~~l~ls~N~l~~--~~p~~ 683 (1048)
+ .+|. .+++|++|++++|++++ .+|..+..+ ++|++||+++|+++| .+|.+
T Consensus 350 ~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~s 417 (454)
T 1jl5_A 350 A-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPES 417 (454)
T ss_dssp S-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-------------------------------
T ss_pred c-cccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchhh
Confidence 8 4555 36788888888888887 677777777 889999999999998 66653
No 48
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=367.30 Aligned_cols=246 Identities=23% Similarity=0.317 Sum_probs=192.7
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
+.....||+|+||+||+|++. +++.||+|++.............+++..++.++||||+++++++...+..++||||++
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~ 91 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCP 91 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 344567999999999999875 7889999998765544444456677888899999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC-CC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS-SN 935 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~-~~ 935 (1048)
+|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 92 gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 92 GGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp TCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999999996543 489999999999999999999999 99999999999999999999999999998655332 23
Q ss_pred ccccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 936 WSELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... .......+..+....+.
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----------~~~~~~~i~~~~~~~p~--- 231 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----------VMALYKKIMRGKYDVPK--- 231 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHTCCCCCT---
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHcCCCCCCC---
Confidence 455689999999999988776 899999999999999999999986322 12222333333332221
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....+.+++.+||+.||++|||++|+++
T Consensus 232 -~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 232 -WLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 12345778999999999999999999986
No 49
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.3e-39 Score=378.61 Aligned_cols=422 Identities=23% Similarity=0.297 Sum_probs=178.5
Q ss_pred CCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccccceecccccCcCcCCcCCCceEE
Q 045493 47 LSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLS 126 (1048)
Q Consensus 47 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~ 126 (1048)
.++|++|++++|.+ +.+|.+|+.+++|++|++++|++++..|.+++.+++|+.+++.+|.. .+|++|+
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~ 77 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELE 77 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEE
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEE
Confidence 35566666666666 35666666666666666666666655666666666666666655542 3456666
Q ss_pred eecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccc
Q 045493 127 LSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNL 206 (1048)
Q Consensus 127 l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l 206 (1048)
+++|.+++. |. ..++|++|++++|.+++ +|.. +
T Consensus 78 l~~~~l~~l----------------p~---------------------------~~~~L~~L~l~~n~l~~-lp~~---~ 110 (454)
T 1jl5_A 78 LNNLGLSSL----------------PE---------------------------LPPHLESLVASCNSLTE-LPEL---P 110 (454)
T ss_dssp CTTSCCSCC----------------CS---------------------------CCTTCSEEECCSSCCSS-CCCC---C
T ss_pred ecCCccccC----------------CC---------------------------CcCCCCEEEccCCcCCc-cccc---c
Confidence 666665521 11 01344555555555543 3321 2
Q ss_pred cccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeecccccccCCCchhhhccchhhhhhh
Q 045493 207 RSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHV 286 (1048)
Q Consensus 207 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l 286 (1048)
++|++|++++|++++ +|.. .++|++|++++|.+++ +| .|+++++|++|++++|++++ +|..+
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~----------- 172 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP----------- 172 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC-----------
T ss_pred CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc-----------
Confidence 445555555555542 2211 1345555555555553 33 35555555555555555442 12110
Q ss_pred ccccccCCCCCcccCCCCCCcEEEccCceeecccccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCcccc
Q 045493 287 HNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNG 366 (1048)
Q Consensus 287 ~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 366 (1048)
.+|++|++++|++++ +| .++.+++|+.|++++|.+++ +|... ++|++|++++|.++
T Consensus 173 -----------------~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~- 228 (454)
T 1jl5_A 173 -----------------PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE- 228 (454)
T ss_dssp -----------------TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-
T ss_pred -----------------ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-
Confidence 134444444444433 22 23444444444444444432 22111 24555555555554
Q ss_pred CcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCccc
Q 045493 367 SIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQN 446 (1048)
Q Consensus 367 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~ 446 (1048)
.+|. ++++++|++|++++|++++ +|.. .++|+.|++++|++++ +|.. .++|++|++++|.+++. |..
T Consensus 229 ~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~--- 295 (454)
T 1jl5_A 229 ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL--- 295 (454)
T ss_dssp SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---
T ss_pred cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---
Confidence 3332 4455555555555555543 2221 2445555555555554 2221 24566666666666652 111
Q ss_pred ccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEE
Q 045493 447 CTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526 (1048)
Q Consensus 447 l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 526 (1048)
.++|++|++++|+++++.. ..++|+.|++++|++++ +|.. +++|++|++++|++++ +|. .+++|++|+
T Consensus 296 ~~~L~~L~l~~N~l~~i~~----~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~ 363 (454)
T 1jl5_A 296 PPNLYYLNASSNEIRSLCD----LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLH 363 (454)
T ss_dssp CTTCCEEECCSSCCSEECC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred CCcCCEEECcCCcCCcccC----CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEE
Confidence 1467777777777765321 12477778888777775 3322 4677788888887773 444 367788888
Q ss_pred cccCcccC--CcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccc--ccccccccccccccccccc
Q 045493 527 FSSNRLVG--QIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKL--IPKNLGELRKLHHLNLSNN 602 (1048)
Q Consensus 527 Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~l~~l~~L~~L~Ls~N 602 (1048)
+++|++++ .+|..+.. |+.|.+.+.+|.. +++|++||+++|+++++ +| ..|+.|.+++|
T Consensus 364 L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP------~sl~~L~~~~~ 426 (454)
T 1jl5_A 364 VEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIP------ESVEDLRMNSE 426 (454)
T ss_dssp CCSSCCSSCCCCCTTCCE--------EECCC-------------------------------------------------
T ss_pred CCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccch------hhHhheeCcCc
Confidence 88888776 44544432 2345555555542 47888999999998873 33 35677788888
Q ss_pred cccchhhhh
Q 045493 603 QFSQEISIQ 611 (1048)
Q Consensus 603 ~l~~~~~~~ 611 (1048)
.+.+..+..
T Consensus 427 ~~~~~~~~~ 435 (454)
T 1jl5_A 427 RVVDPYEFA 435 (454)
T ss_dssp ---------
T ss_pred ccCCccccC
Confidence 887654433
No 50
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.3e-40 Score=359.55 Aligned_cols=247 Identities=24% Similarity=0.383 Sum_probs=199.9
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
+.....||+|+||+||+|.+. +++.||+|++....... .....+++..++.++||||+++++++...+..++||||++
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 100 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC-HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH-HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence 344557899999999999874 68899999986543332 2334566777788999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 101 ~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 173 (297)
T 3fxz_A 101 GGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (297)
T ss_dssp TCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc
Confidence 99999999653 378899999999999999999999 99999999999999999999999999998876665556
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...........+ .......
T Consensus 174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----------~~~~~~~~~~~~-~~~~~~~ 241 (297)
T 3fxz_A 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-----------RALYLIATNGTP-ELQNPEK 241 (297)
T ss_dssp CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----------HHHHHHHHHCSC-CCSCGGG
T ss_pred CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHHhCCCC-CCCCccc
Confidence 6678999999999999999999999999999999999999998632211 011111111111 0111123
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
....+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 3456888999999999999999999986
No 51
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=6.3e-40 Score=362.74 Aligned_cols=248 Identities=31% Similarity=0.433 Sum_probs=190.0
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
...||+|+||+||+|+.. ++.||||++........ .....++++.+++++||||+++++++.+.+..++||||+++|+
T Consensus 42 ~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 456899999999999874 88899999865433221 1233456677788999999999999999999999999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP--ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
|.+++........+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++..........
T Consensus 121 L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~ 197 (309)
T 3p86_A 121 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK 197 (309)
T ss_dssp HHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-------------
T ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccc
Confidence 999997655445589999999999999999999998 8 99999999999999999999999999986554444445
Q ss_pred ccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhh--ccCCCCCCchhHH
Q 045493 938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDL--IDSRLPPPLGEVE 1015 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 1015 (1048)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+ .......+ .
T Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~-----------~~~~~~~~~~~~~~~~~----~ 262 (309)
T 3p86_A 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP-----------AQVVAAVGFKCKRLEIP----R 262 (309)
T ss_dssp ----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH-----------HHHHHHHHHSCCCCCCC----T
T ss_pred cCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhcCCCCCCC----c
Confidence 56799999999999999999999999999999999999999864321 1111111 11111111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.....+.+++.+||+.||++|||++|+++.|+
T Consensus 263 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22346888999999999999999999999886
No 52
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.9e-39 Score=362.00 Aligned_cols=268 Identities=28% Similarity=0.423 Sum_probs=207.5
Q ss_pred cccCCcceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEE
Q 045493 774 ASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYE 853 (1048)
Q Consensus 774 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 853 (1048)
....+.....||+|+||+||+|++.+++.||+|++....... .....+++..++.++||||+++++++.+.+..++|||
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQG-IEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSH-HHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEE
T ss_pred HHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHH-HHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEE
Confidence 334445556799999999999998889999999886543222 2234556666788899999999999999999999999
Q ss_pred ccCCCCHHHHHhcccc-ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 854 YLERGSLATILSNEAT-AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
|+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 192 (321)
T 2qkw_B 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192 (321)
T ss_dssp CCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSS
T ss_pred cCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999865432 23589999999999999999999999 9999999999999999999999999999865432
Q ss_pred C--CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCccccc----chhhhhhhccCC
Q 045493 933 S--SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAAN----MNIVVNDLIDSR 1006 (1048)
Q Consensus 933 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 1006 (1048)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||............... .........++.
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (321)
T 2qkw_B 193 DQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN 272 (321)
T ss_dssp SCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSS
T ss_pred cccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChh
Confidence 2 2233456899999999999889999999999999999999999998643321111000000 000111222222
Q ss_pred CCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1007 LPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1007 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.... ...+....+.+++.+||+.||++|||++|+++.|+
T Consensus 273 ~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 273 LADK--IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CTTC--SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hccc--cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 2221 23466778999999999999999999999999986
No 53
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.4e-39 Score=363.40 Aligned_cols=249 Identities=18% Similarity=0.215 Sum_probs=202.1
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-----cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEE
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-----GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-----~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv 851 (1048)
+.....||+|+||+||+|+.+ +++.||+|.+........ ......++..++.++||||+++++++.+.+..|+|
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 93 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI 93 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEE
Confidence 334557899999999999887 688999999876543221 12345667778889999999999999999999999
Q ss_pred EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC----ceEEecccccc
Q 045493 852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY----KAHVSDFGTAK 927 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~----~~kl~DfG~a~ 927 (1048)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 94 ~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 94 LELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 9999999999999653 3489999999999999999999999 999999999999998877 79999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCC
Q 045493 928 FLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRL 1007 (1048)
Q Consensus 928 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1048)
..... ......+||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .......+.....
T Consensus 168 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~-----------~~~~~~~i~~~~~ 235 (361)
T 2yab_A 168 EIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----------KQETLANITAVSY 235 (361)
T ss_dssp ECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----------HHHHHHHHHTTCC
T ss_pred EcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhcCC
Confidence 76543 33455689999999999999999999999999999999999999986322 1222333333333
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1008 PPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1008 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
......+......+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3322222334556889999999999999999999985
No 54
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.4e-39 Score=367.41 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=198.6
Q ss_pred ceeeecccccccEEEEEEc--------CCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT--------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFL 850 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~l 850 (1048)
....||+|+||.||+|++. ++..||||+++.............++..++.+ +||||++++++|.+.+..|+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 3456899999999999864 23468999986543322223345566677888 89999999999999999999
Q ss_pred EEEccCCCCHHHHHhcccc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc
Q 045493 851 VYEYLERGSLATILSNEAT-------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK 917 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~ 917 (1048)
||||+++|+|.++++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 241 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 241 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECCCCC
Confidence 9999999999999976432 23478999999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCC--CccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCccccc
Q 045493 918 AHVSDFGTAKFLKPDSS--NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAAN 994 (1048)
Q Consensus 918 ~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 994 (1048)
+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 242 ~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~----------- 310 (370)
T 2psq_A 242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP----------- 310 (370)
T ss_dssp EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------
T ss_pred EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC-----------
Confidence 99999999987654332 2234467889999999999999999999999999999999 999976322
Q ss_pred chhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 995 MNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
.......+......... ......+.+++.+||+.||++|||+.|+++.|++
T Consensus 311 ~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 311 VEELFKLLKEGHRMDKP---ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp GGGHHHHHHTTCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11122222222211111 1233468889999999999999999999999863
No 55
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.8e-39 Score=360.65 Aligned_cols=245 Identities=21% Similarity=0.236 Sum_probs=198.7
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|+.+ +++.||+|++.+... .........+.+.++.++||||+++++++...+..|+||||++
T Consensus 9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 3456899999999999886 688999999865321 1112234456667788899999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.+++.+.+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.+|++||+|||+++.........
T Consensus 89 gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 162 (337)
T 1o6l_A 89 GGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162 (337)
T ss_dssp TCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcc
Confidence 999999997543 488999999999999999999999 99999999999999999999999999998755555555
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
...+||+.|+|||++.+..++.++||||+||++|||++|+.||...+ .......+.......+. .
T Consensus 163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----------~~~~~~~i~~~~~~~p~----~ 227 (337)
T 1o6l_A 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----------HERLFELILMEEIRFPR----T 227 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCT----T
T ss_pred cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC-----------HHHHHHHHHcCCCCCCC----C
Confidence 67789999999999999999999999999999999999999986322 11222222222222211 2
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRP-----TMQKVCNL 1045 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 1045 (1048)
....+.+++.+||+.||++|| +++|+++.
T Consensus 228 ~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 234678899999999999999 89998753
No 56
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.3e-39 Score=360.53 Aligned_cols=244 Identities=20% Similarity=0.321 Sum_probs=198.6
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
.....||+|+||.||+|++. +++.||+|++....... ......++++.++.++||||+++++++...+..|+||||++
T Consensus 18 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 97 (328)
T 3fe3_A 18 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYAS 97 (328)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCC
Confidence 34557899999999999884 78999999986643322 12223456777788999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 98 ~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~ 170 (328)
T 3fe3_A 98 GGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKL 170 (328)
T ss_dssp TCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-CGG
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCC-Ccc
Confidence 999999996543 488999999999999999999999 9999999999999999999999999999876543 334
Q ss_pred cccccccccccccccccCCCC-chhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 937 SELAGTCGYIAPELAYTMRAN-EKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~-~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
...+||+.|+|||++.+..+. .++||||+||++|||++|+.||.... .......+..+....+.
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----------~~~~~~~i~~~~~~~p~---- 235 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----------LKELRERVLRGKYRIPF---- 235 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCT----
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCCC----
Confidence 567899999999999888775 89999999999999999999986422 12223333333333222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....+.+++.+||+.||++|||++|+++
T Consensus 236 ~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 236 YMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp TSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 12345788999999999999999999976
No 57
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2e-39 Score=361.50 Aligned_cols=251 Identities=22% Similarity=0.289 Sum_probs=183.6
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcc-cCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-HRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
+.+.||+|+||+||+|.+. +++.||||++.... .....+++..++.+. ||||+++++++.+....|+||||+++
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM----EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp TSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG----HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCCccccCCCeEEEEEEECCCCCEEEEEEEChhh----hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 3456899999999999886 67889999986431 223455666677776 99999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC---ceEEeccccccccCCCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY---KAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~---~~kl~DfG~a~~~~~~~~ 934 (1048)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.......
T Consensus 91 ~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 91 GELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp CBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 9999999754 3489999999999999999999999 999999999999998765 899999999987765555
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...........+..+........+
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~ 240 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL----TCTSAVEIMKKIKKGDFSFEGEAW 240 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----------CCCHHHHHHHHTTTCCCCCSHHH
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccc----ccccHHHHHHHHHcCCCCCCcccc
Confidence 5566788999999999999999999999999999999999999987433211 111122334444455554444444
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....++.+++.+||+.||++|||++|+++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 555678999999999999999999999874
No 58
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.3e-39 Score=363.12 Aligned_cols=263 Identities=24% Similarity=0.363 Sum_probs=197.5
Q ss_pred cceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC----eEEEEEEc
Q 045493 779 GKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ----HLFLVYEY 854 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~ 854 (1048)
.....||+|+||+||+|++. ++.||||++...... ......++..++.++||||+++++++.... ..++||||
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~ 103 (322)
T 3soc_A 27 QLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ--SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103 (322)
T ss_dssp EEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred hhhheecccCceEEEEEEEC-CCEEEEEEeecCchH--HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence 34556899999999999887 789999998643211 122334555567889999999999997643 47999999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCC-------CCCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC-------FPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~ 927 (1048)
+++|+|.++++.. .+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 104 HEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp CTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence 9999999999653 3899999999999999999999861 2379999999999999999999999999998
Q ss_pred ccCCCCC--CccccccccccccccccccC-----CCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccc-----cc
Q 045493 928 FLKPDSS--NWSELAGTCGYIAPELAYTM-----RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAA-----NM 995 (1048)
Q Consensus 928 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~-----~~ 995 (1048)
....... ......||+.|+|||++.+. .++.++||||+||++|||+||+.||.........+.... ..
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T 3soc_A 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259 (322)
T ss_dssp EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence 7654332 23346799999999998863 456789999999999999999999875433222211110 11
Q ss_pred hhhhhhhccCCCCCCch---hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 996 NIVVNDLIDSRLPPPLG---EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 996 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
.............+... ........+.+++.+||+.||++|||++|+++.|++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 260 EDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11111222222222111 112445679999999999999999999999999873
No 59
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=370.63 Aligned_cols=249 Identities=18% Similarity=0.235 Sum_probs=200.4
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||+||+|... +++.+|+|++....... ......+++..++.++||||+++++++.+.+..|+||||+++
T Consensus 15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 3456899999999999875 68889999987543322 122345667778889999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC---CCCceEEeccccccccCCCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD---LEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~---~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
|+|.+++.... .+++..+..++.||+.|++|||+. +|+||||||+||+++ .++.+||+|||+++.......
T Consensus 95 g~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 95 GELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp CBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 99999987543 488999999999999999999999 999999999999998 467899999999988766555
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
......||+.|+|||++.+..++.++||||+||++|+|++|+.||...+ .......+..+....+...+
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~-----------~~~~~~~i~~~~~~~~~~~~ 237 (444)
T 3soa_A 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-----------QHRLYQQIKAGAYDFPSPEW 237 (444)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-----------HHHHHHHHHHTCCCCCTTTT
T ss_pred eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc-----------HHHHHHHHHhCCCCCCcccc
Confidence 5566789999999999999899999999999999999999999985322 12223333333333222222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
......+.+++.+||+.||++|||++|+++.
T Consensus 238 ~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 238 DTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 3344568899999999999999999999873
No 60
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.1e-39 Score=355.63 Aligned_cols=275 Identities=30% Similarity=0.460 Sum_probs=210.5
Q ss_pred CCcchhhhcccCCcce------eeecccccccEEEEEEcCCCceeeEEeccCCCCc---ccchhhHHHHHHhhcccCcee
Q 045493 766 VNNQELLSASTFEGKM------VLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE---IGINQKGFVSEITEIRHRNIV 836 (1048)
Q Consensus 766 ~~~~~~~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~---~~~~~~~~~~~l~~l~h~niv 836 (1048)
+...++...+..+... ..||+|+||.||+|.. +++.||||++....... ......+++..++.++||||+
T Consensus 15 ~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~ 93 (307)
T 2nru_A 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93 (307)
T ss_dssp CCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBC
T ss_pred ccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeE
Confidence 3444444444443333 6799999999999987 48899999987543222 122344566677888999999
Q ss_pred eEeeEeeeCCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC
Q 045493 837 KFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY 916 (1048)
Q Consensus 837 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~ 916 (1048)
++++++.+.+..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~ 170 (307)
T 2nru_A 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAF 170 (307)
T ss_dssp CEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTC
T ss_pred EEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCC
Confidence 99999999999999999999999999997655555689999999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCccc--
Q 045493 917 KAHVSDFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPA-- 992 (1048)
Q Consensus 917 ~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~-- 992 (1048)
.+||+|||+++........ .....||+.|+|||.+.+ .++.++||||+|+++|||++|+.||.............
T Consensus 171 ~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 249 (307)
T 2nru_A 171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249 (307)
T ss_dssp CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHH
T ss_pred cEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHH
Confidence 9999999999876543222 234578999999998865 58999999999999999999999987533211110000
Q ss_pred -ccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 993 -ANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 993 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
........+..++..... .......+.+++.+||+.||++|||++|++++|++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~ 303 (307)
T 2nru_A 250 IEDEEKTIEDYIDKKMNDA---DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303 (307)
T ss_dssp HHTTSCCHHHHSCSSCSCC---CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred hhhhhhhhhhhcccccccc---chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 001111233334443332 24456678999999999999999999999999863
No 61
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8.4e-39 Score=355.98 Aligned_cols=246 Identities=27% Similarity=0.372 Sum_probs=199.7
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
.....||+|+||.||+|+.. +++.||||++....... .....+++..++.++||||+++++++...+..++||||+++
T Consensus 48 ~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 126 (321)
T 2c30_A 48 DSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR-RELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG 126 (321)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCS-HHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred hccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhH-HHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence 33457899999999999987 78999999986543322 23345667778889999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 127 ~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 199 (321)
T 2c30_A 127 GALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 199 (321)
T ss_dssp CBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccc
Confidence 999999864 2489999999999999999999999 999999999999999999999999999987765545556
Q ss_pred ccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493 938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.....+ ........
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-----------~~~~~~~~~~~~~-~~~~~~~~ 267 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-----------VQAMKRLRDSPPP-KLKNSHKV 267 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHHHSSCC-CCTTGGGS
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHhcCCCC-CcCccccC
Confidence 67899999999999999999999999999999999999999863221 1111111111111 11111223
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1018 LKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...+.+++.+||+.||++|||++|+++
T Consensus 268 ~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 268 SPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 456888999999999999999999986
No 62
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-38 Score=361.44 Aligned_cols=248 Identities=20% Similarity=0.245 Sum_probs=193.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc--ccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE--IGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|+.+ +++.||+|++++..... .......+...+.++ +||||+++++++.+.+..|+||||+
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~ 135 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 135 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcC
Confidence 4457899999999999987 56789999987643221 122234455555555 8999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.+++.+.+ .+++..++.++.||+.||+|||+. +|+||||||+|||++.+|++||+|||+|+........
T Consensus 136 ~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~ 209 (396)
T 4dc2_A 136 NGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 209 (396)
T ss_dssp TTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCCCc
Confidence 9999999997543 489999999999999999999999 9999999999999999999999999999875545555
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||......... ...........+.......+.
T Consensus 210 ~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~--~~~~~~~~~~~i~~~~~~~p~---- 283 (396)
T 4dc2_A 210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--DQNTEDYLFQVILEKQIRIPR---- 283 (396)
T ss_dssp BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--------CCHHHHHHHHHHCCCCCCT----
T ss_pred cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccccccc--chhhHHHHHHHHhccccCCCC----
Confidence 66788999999999999999999999999999999999999998643211000 011111122233333322221
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTM 1039 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~ 1039 (1048)
....++.+++.+||+.||++||++
T Consensus 284 ~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 284 SLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp TSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred cCCHHHHHHHHHHhcCCHhHcCCC
Confidence 223467889999999999999996
No 63
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1e-38 Score=359.87 Aligned_cols=250 Identities=21% Similarity=0.244 Sum_probs=201.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCC----CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT----GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY 854 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~----~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 854 (1048)
....||+|+||+||+|.+. +++.||+|++..... ........+++..++.++||||+++++++.+.+..|+||||
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeC
Confidence 4456899999999999876 688999998854211 11123345677778889999999999999999999999999
Q ss_pred cCCCCHHHHHhccc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc---eEEeccccccccC
Q 045493 855 LERGSLATILSNEA-TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK---AHVSDFGTAKFLK 930 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~---~kl~DfG~a~~~~ 930 (1048)
+++|+|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+++...
T Consensus 108 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~ 184 (351)
T 3c0i_A 108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184 (351)
T ss_dssp CSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTCEECC
T ss_pred CCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcceeEec
Confidence 99999998885432 233478999999999999999999999 9999999999999987654 9999999998876
Q ss_pred CCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCC
Q 045493 931 PDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP 1010 (1048)
Q Consensus 931 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1048)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ......+........
T Consensus 185 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------------~~~~~~i~~~~~~~~ 252 (351)
T 3c0i_A 185 ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK------------ERLFEGIIKGKYKMN 252 (351)
T ss_dssp TTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH------------HHHHHHHHHTCCCCC
T ss_pred CCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH------------HHHHHHHHcCCCCCC
Confidence 55444556789999999999999999999999999999999999999986321 122333333333333
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1011 LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1011 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...+......+.+++.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 253 PRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2222334567889999999999999999999986
No 64
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-39 Score=356.33 Aligned_cols=247 Identities=21% Similarity=0.256 Sum_probs=201.4
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||+||+|.+. +++.+|+|.+.... .......+++..++.++||||+++++++.+.+..++||||+++|
T Consensus 9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~ 86 (321)
T 1tki_A 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL 86 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCC
Confidence 3456899999999999887 57788999886432 22233456777788899999999999999999999999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC--CCceEEeccccccccCCCCCCc
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL--EYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~--~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++..... ...
T Consensus 87 ~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~-~~~ 160 (321)
T 1tki_A 87 DIFERINTS--AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-DNF 160 (321)
T ss_dssp BHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-CEE
T ss_pred CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-Ccc
Confidence 999999643 23588999999999999999999999 9999999999999997 789999999999876543 334
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+..............
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----------~~~~~~~i~~~~~~~~~~~~~~ 229 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-----------NQQIIENIMNAEYTFDEEAFKE 229 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-----------HHHHHHHHHHTCCCCCHHHHTT
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-----------HHHHHHHHHcCCCCCChhhhcc
Confidence 55679999999999998889999999999999999999999986322 2223334444444433333334
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
...++.+++.+||+.||++|||+.|+++.
T Consensus 230 ~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 230 ISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 45678899999999999999999999873
No 65
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=364.13 Aligned_cols=244 Identities=22% Similarity=0.286 Sum_probs=190.7
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|+.+ +++.||+|++..... .........+.+.+..+ +||||+++++++.+.+..|+||||+
T Consensus 27 ~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~ 106 (353)
T 3txo_A 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFV 106 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCC
Confidence 4456899999999999886 578899999865321 11112233445555555 6999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+|||++.+|++||+|||+|+........
T Consensus 107 ~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 180 (353)
T 3txo_A 107 NGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT 180 (353)
T ss_dssp CSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccCCcc
Confidence 9999999997543 489999999999999999999999 9999999999999999999999999999865545455
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||...+ .......+.......+.
T Consensus 181 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----------~~~~~~~i~~~~~~~p~---- 245 (353)
T 3txo_A 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN-----------EDDLFEAILNDEVVYPT---- 245 (353)
T ss_dssp -----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCT----
T ss_pred ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC-----------HHHHHHHHHcCCCCCCC----
Confidence 566789999999999999899999999999999999999999986322 22233333333333221
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCH------HHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTM------QKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~------~evl~ 1044 (1048)
.....+.+++.+||++||++||++ +|+++
T Consensus 246 ~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 246 WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 123457889999999999999998 67664
No 66
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=355.37 Aligned_cols=250 Identities=19% Similarity=0.224 Sum_probs=200.1
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-----cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEE
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-----GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-----~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv 851 (1048)
+.....||+|+||.||+|... +++.||+|++........ .....+++..++.++||||+++++++.+.+..++|
T Consensus 13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 92 (326)
T 2y0a_A 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 334557899999999999886 688999999876433221 12345667778889999999999999999999999
Q ss_pred EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC----ceEEecccccc
Q 045493 852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY----KAHVSDFGTAK 927 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~----~~kl~DfG~a~ 927 (1048)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 93 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 93 LELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999999653 3488999999999999999999999 999999999999999887 89999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCC
Q 045493 928 FLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRL 1007 (1048)
Q Consensus 928 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1048)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.....
T Consensus 167 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----------~~~~~~~~~~~~~ 234 (326)
T 2y0a_A 167 KIDFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----------KQETLANVSAVNY 234 (326)
T ss_dssp ECCTT-SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----------HHHHHHHHHHTCC
T ss_pred ECCCC-CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-----------HHHHHHHHHhcCC
Confidence 76533 23345679999999999999999999999999999999999999985322 1112222222222
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1008 PPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1008 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
..+..........+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22222222334568899999999999999999999873
No 67
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=353.17 Aligned_cols=256 Identities=21% Similarity=0.278 Sum_probs=202.0
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC--eEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ--HLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~ 856 (1048)
....||+|+||+||+|++. +++.||||++.............++++.++.++||||+++++++.... ..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 3456899999999999887 588999999875443333334456777788999999999999987655 7899999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE----CCCCceEEeccccccccCCC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL----DLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll----~~~~~~kl~DfG~a~~~~~~ 932 (1048)
+|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp TCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 999999998765555589999999999999999999999 99999999999999 77888999999999876543
Q ss_pred CCCccccccccccccccccc--------cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhh--
Q 045493 933 SSNWSELAGTCGYIAPELAY--------TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDL-- 1002 (1048)
Q Consensus 933 ~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 1002 (1048)
. ......||+.|+|||++. +..++.++||||+||++|||++|+.||....... ........+
T Consensus 170 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~~~~~~~~~~ 241 (319)
T 4euu_A 170 E-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-------RNKEVMYKIIT 241 (319)
T ss_dssp C-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG-------GCHHHHHHHHH
T ss_pred C-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc-------hhHHHHHHHhc
Confidence 3 334567999999999886 4678999999999999999999999986322110 000011111
Q ss_pred -------------------ccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 045493 1003 -------------------IDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046 (1048)
Q Consensus 1003 -------------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 1046 (1048)
+.+..+............+.+++.+||+.||++|||++|+++..
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 11122222233356667789999999999999999999999865
No 68
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.6e-38 Score=356.64 Aligned_cols=247 Identities=17% Similarity=0.321 Sum_probs=197.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC------------
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ------------ 846 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~------------ 846 (1048)
....||+|+||.||+|++. +++.||||++.............++++.+++++||||+++++++.+..
T Consensus 10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 3456899999999999987 788999999976544333344566777888999999999999985543
Q ss_pred ---------------------------------------------eEEEEEEccCCCCHHHHHhccccccccCHHHHHHH
Q 045493 847 ---------------------------------------------HLFLVYEYLERGSLATILSNEATAAELDWSKRVNV 881 (1048)
Q Consensus 847 ---------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i 881 (1048)
..++||||+++|+|.++++........++..+..+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i 169 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHI 169 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHH
Confidence 38999999999999999987766666778889999
Q ss_pred HHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC------------Ccccccccccccccc
Q 045493 882 IKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS------------NWSELAGTCGYIAPE 949 (1048)
Q Consensus 882 ~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~------------~~~~~~gt~~y~aPE 949 (1048)
+.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ......||+.|+|||
T Consensus 170 ~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 246 (332)
T 3qd2_B 170 FIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246 (332)
T ss_dssp HHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHH
T ss_pred HHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChH
Confidence 99999999999999 999999999999999999999999999987765421 223457999999999
Q ss_pred ccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhcc
Q 045493 950 LAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCL 1029 (1048)
Q Consensus 950 ~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 1029 (1048)
++.+..++.++||||+||++|||++|..|+.. .............+ .........+.+++.+||
T Consensus 247 ~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------------~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l 310 (332)
T 3qd2_B 247 QIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------------RVRIITDVRNLKFP---LLFTQKYPQEHMMVQDML 310 (332)
T ss_dssp HHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------------HHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHH
T ss_pred HhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------------HHHHHHHhhccCCC---cccccCChhHHHHHHHHc
Confidence 99999999999999999999999998876321 11112222222222 223445567789999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 045493 1030 DANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1030 ~~dP~~RPt~~evl~~ 1045 (1048)
+.||++|||++|+++.
T Consensus 311 ~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 311 SPSPTERPEATDIIEN 326 (332)
T ss_dssp CSSGGGSCCHHHHHHS
T ss_pred cCCCCcCCCHHHHhhc
Confidence 9999999999999873
No 69
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=349.96 Aligned_cols=249 Identities=26% Similarity=0.416 Sum_probs=195.7
Q ss_pred eeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
...||+|+||+||+|.+. +++.||+|++.... .+......++++.++.++||||+++++++.+.+..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 456899999999999886 57889999875432 2222334566777788999999999999999999999999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc---
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW--- 936 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~--- 936 (1048)
|.++++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 94 L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 94 LRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp HHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred HHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 99999753 23489999999999999999999999 99999999999999999999999999998765332211
Q ss_pred -----------cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccC
Q 045493 937 -----------SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDS 1005 (1048)
Q Consensus 937 -----------~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1048)
....||+.|+|||++.+..++.++||||+||++|||++|..||......... ... ......+.
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~--~~~----~~~~~~~~ 242 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--FGL----NVRGFLDR 242 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT--SSB----CHHHHHHH
T ss_pred ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH--Hhh----hhhccccc
Confidence 1457999999999999999999999999999999999999997643211110 011 11111111
Q ss_pred CCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1006 RLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1006 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
..+.. ....+.+++.+||+.||++|||++|++++|+
T Consensus 243 ~~~~~------~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 243 YCPPN------CPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp TCCTT------CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCC------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111 1234778999999999999999999999886
No 70
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.8e-39 Score=356.88 Aligned_cols=248 Identities=23% Similarity=0.361 Sum_probs=195.2
Q ss_pred eeeecccccccEEEEEEc----CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 781 MVLHGTGGCGTVYKAELT----SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
...||+|+||.||+|++. .+..||||++.............+++..++.++||||+++++++.+.+..++||||++
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 133 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYME 133 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCT
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCC
Confidence 456899999999999885 2334999998754433333344566777788999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC-
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN- 935 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~- 935 (1048)
+|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 134 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (325)
T 3kul_A 134 NGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208 (325)
T ss_dssp TCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC----CC
T ss_pred CCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCccce
Confidence 99999999643 23589999999999999999999999 9999999999999999999999999999877544322
Q ss_pred --ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493 936 --WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus 936 --~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
.....+|+.|+|||++.+..++.++||||+||++|||++ |+.||.... .......+......+..
T Consensus 209 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~~- 276 (325)
T 3kul_A 209 YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT-----------NRDVISSVEEGYRLPAP- 276 (325)
T ss_dssp EECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC-----------HHHHHHHHHTTCCCCCC-
T ss_pred eeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC-----------HHHHHHHHHcCCCCCCC-
Confidence 123346778999999998899999999999999999999 999985322 11222222222111111
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
......+.+++.+||+.||++|||++|++++|+
T Consensus 277 --~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 277 --MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 123346888999999999999999999999986
No 71
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.1e-38 Score=360.40 Aligned_cols=248 Identities=19% Similarity=0.256 Sum_probs=199.2
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|.+. +++.||+|++....... ......+++..++.++||||+++++++.+.+..|+||||+++
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 3456899999999999886 68899999987543322 112345567777889999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC---CceEEeccccccccCCCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE---YKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~---~~~kl~DfG~a~~~~~~~~ 934 (1048)
|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.+ +.+||+|||++...... .
T Consensus 113 g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~-~ 185 (362)
T 2bdw_A 113 GELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-E 185 (362)
T ss_dssp CBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC-C
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC-c
Confidence 9999998653 3488999999999999999999999 99999999999999865 45999999999876533 3
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||...+ .......+.......+...+
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~-----------~~~~~~~i~~~~~~~~~~~~ 254 (362)
T 2bdw_A 186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----------QHRLYAQIKAGAYDYPSPEW 254 (362)
T ss_dssp SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHTCCCCCTTGG
T ss_pred ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHhCCCCCCcccc
Confidence 3445689999999999999899999999999999999999999986322 11222333333333222223
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
......+.+++.+||+.||++|||+.|+++.
T Consensus 255 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 255 DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 3345668899999999999999999999763
No 72
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1e-38 Score=350.75 Aligned_cols=252 Identities=24% Similarity=0.325 Sum_probs=193.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc--cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI--GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|++. +++.||+|++........ .....+++..++.++||||+++++++.+.+..|+||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 3456899999999999876 678899999865433221 1233456666788899999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-C
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS-N 935 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~ 935 (1048)
+|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 95 g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 95 GPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp SCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 999999997543 489999999999999999999999 999999999999999999999999999987654322 2
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCC-chhH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP-LGEV 1014 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 1014 (1048)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ............+.. ....
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 237 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA-----------VSIAIKHIQDSVPNVTTDVR 237 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH-----------HHHHHHHHSSCCCCHHHHSC
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHhhccCCCcchhcc
Confidence 3346799999999999999999999999999999999999999864321 111111111111111 0001
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHhhC
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRP-TMQKVCNLLCR 1048 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~ 1048 (1048)
......+.+++.+||++||++|| +++++.+.|++
T Consensus 238 ~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 238 KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 12335688899999999999998 89999888763
No 73
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.5e-39 Score=364.74 Aligned_cols=248 Identities=22% Similarity=0.313 Sum_probs=197.3
Q ss_pred eeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
...||+|+||.||+|++. +++.||||.++.....+......++++.++.++||||+++++++...+..|+||||+++|+
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 198 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCC
Confidence 456899999999999987 6888999998754333333345667788899999999999999999999999999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc--c
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW--S 937 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~--~ 937 (1048)
|.++++..+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......... .
T Consensus 199 L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~ 273 (377)
T 3cbl_A 199 FLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG 273 (377)
T ss_dssp HHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSS
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCC
Confidence 999997532 3488999999999999999999999 99999999999999999999999999998654321111 1
Q ss_pred ccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+......+.. ..
T Consensus 274 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~---~~ 339 (377)
T 3cbl_A 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN-----------QQTREFVEKGGRLPCP---EL 339 (377)
T ss_dssp CCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH-----------HHHHHHHHTTCCCCCC---TT
T ss_pred CCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHcCCCCCCC---CC
Confidence 2235778999999998899999999999999999998 9999764221 1111112122111111 12
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
....+.+++.+||+.||++|||++++++.|+
T Consensus 340 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 340 CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 2346888999999999999999999999986
No 74
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.1e-38 Score=349.89 Aligned_cols=259 Identities=22% Similarity=0.280 Sum_probs=192.3
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||+||+|++.+++.||+|++....... ......+++..++.++||||+++++++.+.+..++||||+++
T Consensus 25 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~- 103 (311)
T 3niz_A 25 KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK- 103 (311)
T ss_dssp EEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-
T ss_pred hhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-
Confidence 345689999999999999889999999986543222 122345667777889999999999999999999999999986
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCccc
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 938 (1048)
++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 104 ~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 178 (311)
T 3niz_A 104 DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178 (311)
T ss_dssp EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---C
T ss_pred CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccC
Confidence 888887643 23488999999999999999999999 9999999999999999999999999999877655455556
Q ss_pred ccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccC---------CCcccccc-hhhhhhhccCCC
Q 045493 939 LAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS---------LPAPAANM-NIVVNDLIDSRL 1007 (1048)
Q Consensus 939 ~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~ 1007 (1048)
..||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ .+...... ......+.....
T Consensus 179 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (311)
T 3niz_A 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258 (311)
T ss_dssp CCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCC
T ss_pred CcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhccc
Confidence 688999999999876 5689999999999999999999999864322100 00000000 000000000000
Q ss_pred C----CCc-hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1008 P----PPL-GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1008 ~----~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
. ... ........++.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 000 001112356889999999999999999999987
No 75
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=6.2e-39 Score=358.83 Aligned_cols=243 Identities=22% Similarity=0.286 Sum_probs=193.5
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|+.+ +++.||+|+++.... .........+...+..+ +||||+++++++.+.+..|+||||+
T Consensus 21 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~ 100 (345)
T 1xjd_A 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYL 100 (345)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 3457899999999999986 578899999865321 11111223344445544 8999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.+|++||+|||+++........
T Consensus 101 ~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 174 (345)
T 1xjd_A 101 NGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 174 (345)
T ss_dssp TTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCc
Confidence 9999999997533 488999999999999999999999 9999999999999999999999999999875544445
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||...+ .......+.......+ .
T Consensus 175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----------~~~~~~~i~~~~~~~p----~ 239 (345)
T 1xjd_A 175 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD-----------EEELFHSIRMDNPFYP----R 239 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCC----T
T ss_pred ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC-----------HHHHHHHHHhCCCCCC----c
Confidence 566789999999999999999999999999999999999999986322 1122222222222111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQ-KVC 1043 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~-evl 1043 (1048)
.....+.+++.+||+.||++||++. |++
T Consensus 240 ~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 240 WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1234678899999999999999997 654
No 76
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=7.8e-39 Score=363.29 Aligned_cols=249 Identities=22% Similarity=0.388 Sum_probs=186.0
Q ss_pred ceeeecccccccEEEEEEc----CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELT----SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|++. .+..||||+++............+++..+++++||||+++++++.+.+..++||||+
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCC
Confidence 3456899999999999875 467799999875433332334456677778899999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.++++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 129 ~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 129 ENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp TTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 999999999753 33589999999999999999999999 9999999999999999999999999999876543322
Q ss_pred ---ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493 936 ---WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus 936 ---~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+......+..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-----------~~~~~~i~~~~~~~~~ 272 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----------QDVIKAVDEGYRLPPP 272 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-----------HHHHHHHHTTEECCCC
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHcCCCCCCC
Confidence 122345778999999999999999999999999999998 9999763221 1111222111111111
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1012 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
......+.+++.+||+.||++|||+.|++++|+
T Consensus 273 ---~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 273 ---MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp ---TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 123356888999999999999999999999986
No 77
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.3e-38 Score=354.48 Aligned_cols=247 Identities=23% Similarity=0.297 Sum_probs=194.6
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||+||+|++. +++.||+|++.............+++..++.++||||+++++++.+.+..|+||||+++|
T Consensus 11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 3456899999999999887 788899999865544433345567778888999999999999999999999999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC--CCc
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNW 936 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~--~~~ 936 (1048)
+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.... ...
T Consensus 91 ~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 164 (323)
T 3tki_A 91 ELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (323)
T ss_dssp EGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred cHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence 999998643 3489999999999999999999999 99999999999999999999999999998654322 223
Q ss_pred cccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 937 SELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ............... ...
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----------~~~~~~~~~~~~~~~--~~~ 232 (323)
T 3tki_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS----------CQEYSDWKEKKTYLN--PWK 232 (323)
T ss_dssp CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT----------SHHHHHHHTTCTTST--TGG
T ss_pred CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH----------HHHHHHHhcccccCC--ccc
Confidence 45689999999999987775 78999999999999999999998642210 011111111111111 112
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 233 KIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 33456788999999999999999999975
No 78
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.5e-38 Score=354.27 Aligned_cols=251 Identities=15% Similarity=0.167 Sum_probs=198.0
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|+.. +++.||||.+...... .....+++.++.+ +||||+++++++...+..++||||+ +
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (330)
T 2izr_A 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA---PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-G 88 (330)
T ss_dssp EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS---CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEeeccCCceEEEEEECCCCcEEEEEEeccccch---HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-C
Confidence 4456899999999999874 6888999988654322 2456677788888 8999999999999999999999999 9
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc-----eEEeccccccccCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK-----AHVSDFGTAKFLKPD 932 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~-----~kl~DfG~a~~~~~~ 932 (1048)
|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.+...
T Consensus 89 ~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 89 PSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp CBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 9999999753 34589999999999999999999999 9999999999999999887 999999999876543
Q ss_pred CCC-------ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccC
Q 045493 933 SSN-------WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDS 1005 (1048)
Q Consensus 933 ~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1048)
... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .........+...
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~--------~~~~~~~~~i~~~ 235 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA--------DTLKERYQKIGDT 235 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------SSHHHHHHHHHHH
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc--------ccHHHHHHHHHhh
Confidence 321 2456799999999999999999999999999999999999999874321 1111111222111
Q ss_pred CCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1006 RLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1006 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
..+.+.........++.+++..||+.||++||+++++.+.|+
T Consensus 236 ~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 236 KRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred hccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 111111111111127889999999999999999999999885
No 79
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.4e-38 Score=343.55 Aligned_cols=247 Identities=23% Similarity=0.365 Sum_probs=199.3
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCCH
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSL 860 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 860 (1048)
...||+|+||+||+|.+.+++.||+|++....... ....+++..+++++||||+++++++.+.+..++||||+++|+|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 92 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 92 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH--HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCH--HHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcH
Confidence 45689999999999999888999999997543322 3355677778899999999999999999999999999999999
Q ss_pred HHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC-CCcccc
Q 045493 861 ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS-SNWSEL 939 (1048)
Q Consensus 861 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~~~ 939 (1048)
.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...... ......
T Consensus 93 ~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 167 (269)
T 4hcu_A 93 SDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 167 (269)
T ss_dssp HHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred HHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccccCc
Confidence 9999653 23588999999999999999999999 99999999999999999999999999998664322 122334
Q ss_pred ccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHH
Q 045493 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKL 1018 (1048)
Q Consensus 940 ~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1048)
.+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... .......+......... ....
T Consensus 168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~~---~~~~ 233 (269)
T 4hcu_A 168 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----------NSEVVEDISTGFRLYKP---RLAS 233 (269)
T ss_dssp TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------HHHHHHHHHTTCCCCCC---TTSC
T ss_pred ccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC-----------HHHHHHHHhcCccCCCC---CcCC
Confidence 57788999999999999999999999999999999 999986322 11222222222111111 1123
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1019 KSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1019 ~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
..+.+++.+||+.||++|||++|++++|++
T Consensus 234 ~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 263 (269)
T 4hcu_A 234 THVYQIMNHCWRERPEDRPAFSRLLRQLAE 263 (269)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 458889999999999999999999999863
No 80
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=356.20 Aligned_cols=248 Identities=18% Similarity=0.233 Sum_probs=185.2
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
+.....||+|+||.||+|++. +++.||+|++...... .....++..+++++||||+++++++...+..++||||++
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK---KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhH---HHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 444567999999999999987 5778999998754322 234556777888999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC---CCceEEeccccccccCCCC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL---EYKAHVSDFGTAKFLKPDS 933 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~---~~~~kl~DfG~a~~~~~~~ 933 (1048)
+|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 132 ~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 132 GGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp SCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 99999999653 3488999999999999999999999 9999999999999975 889999999999866432
Q ss_pred CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493 934 SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus 934 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......+...........
T Consensus 205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----------~~~~~~~i~~~~~~~~~~~ 274 (349)
T 2w4o_A 205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG----------DQFMFRRILNCEYYFISPW 274 (349)
T ss_dssp --------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC----------HHHHHHHHHTTCCCCCTTT
T ss_pred cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc----------cHHHHHHHHhCCCccCCch
Confidence 223456799999999999999999999999999999999999999853221 1112222222222222112
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 275 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 275 WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 22334568899999999999999999999873
No 81
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.8e-38 Score=355.53 Aligned_cols=246 Identities=17% Similarity=0.246 Sum_probs=196.7
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|.++ +++.||+|.+...... ..++++.+.++ +||||+++++++.+.+..|+||||+++
T Consensus 26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g 100 (342)
T 2qr7_A 26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100 (342)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence 3456899999999999886 6788999998654321 23455556555 799999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC----CceEEeccccccccCCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE----YKAHVSDFGTAKFLKPDS 933 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~----~~~kl~DfG~a~~~~~~~ 933 (1048)
|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||++..+ +.+||+|||+++......
T Consensus 101 g~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 101 GELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 9999999654 3489999999999999999999999 99999999999998543 359999999999876655
Q ss_pred CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493 934 SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus 934 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..........+..+........
T Consensus 175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~~~~i~~~~~~~~~~~ 246 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP--------DDTPEEILARIGSGKFSLSGGY 246 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST--------TSCHHHHHHHHHHCCCCCCSTT
T ss_pred CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC--------cCCHHHHHHHHccCCcccCccc
Confidence 55566789999999999988889999999999999999999999986321 1112223333333333332222
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
+......+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 247 WNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2334456889999999999999999999875
No 82
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4e-38 Score=341.60 Aligned_cols=248 Identities=23% Similarity=0.377 Sum_probs=199.0
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
....||+|+||.||+|++.++..||+|++....... ....+++..+.+++||||+++++++.+.+..++||||+++|+
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (268)
T 3sxs_A 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE--DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGC 89 (268)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH--HHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCB
T ss_pred eeeeeccCCCceEEEEEecCceeEEEEEeccCCCcH--HHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCc
Confidence 345689999999999999988889999987543322 234566777888999999999999999999999999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC-ccc
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN-WSE 938 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~~ 938 (1048)
|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+......... ...
T Consensus 90 L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 90 LLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp HHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred HHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 99999654 23488999999999999999999999 9999999999999999999999999999876543221 223
Q ss_pred cccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus 939 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
..+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... ......+.......... ..
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~~---~~ 230 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-----------SEVVLKVSQGHRLYRPH---LA 230 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-----------HHHHHHHHTTCCCCCCT---TS
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-----------HHHHHHHHcCCCCCCCC---cC
Confidence 456778999999998889999999999999999999 9999863221 11111222221111111 12
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
...+.+++.+||+.||++|||++|+++.|++
T Consensus 231 ~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (268)
T 3sxs_A 231 SDTIYQIMYSCWHELPEKRPTFQQLLSSIEP 261 (268)
T ss_dssp CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGG
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 3458889999999999999999999999874
No 83
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-38 Score=356.30 Aligned_cols=244 Identities=20% Similarity=0.257 Sum_probs=194.9
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|+.+ +++.||+|++..... .........+.+.+..+ +||+|+++++++.+.+..|+||||+
T Consensus 24 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~ 103 (353)
T 2i0e_A 24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 103 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCC
Confidence 3456899999999999987 478899999865321 11112233444555555 7999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.+|++||+|||+++........
T Consensus 104 ~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 177 (353)
T 2i0e_A 104 NGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 177 (353)
T ss_dssp CSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcc
Confidence 9999999997543 488999999999999999999999 9999999999999999999999999999865544455
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||...+ .......+.......+.
T Consensus 178 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----------~~~~~~~i~~~~~~~p~---- 242 (353)
T 2i0e_A 178 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----------EDELFQSIMEHNVAYPK---- 242 (353)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCT----
T ss_pred cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC-----------HHHHHHHHHhCCCCCCC----
Confidence 566789999999999999999999999999999999999999986322 12223333333332221
Q ss_pred HHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPT-----MQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 1044 (1048)
....++.+++.+||+.||++||+ ++|+++
T Consensus 243 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 243 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 23346888999999999999995 567654
No 84
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.5e-38 Score=349.71 Aligned_cols=253 Identities=24% Similarity=0.340 Sum_probs=187.6
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee----CCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH----TQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~ 855 (1048)
....||+|+||+||+|++ +++.||||++...... ....+.++.....++||||+++++++.. ....++||||+
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~--~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 12 LLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEK--SWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGHH--HHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEEeeccCCCcEEEEEEE-CCEEEEEEEeccccch--hhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 345689999999999988 5889999998643211 1111222222334789999999998654 34689999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH--------HDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~ 927 (1048)
++|+|.++++. ..+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 89 EMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp TTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 99999999953 24899999999999999999999 77 99999999999999999999999999998
Q ss_pred ccCCCCCC----ccccccccccccccccccC------CCCchhhHHHHHHHHHHHHhC----------CCCCcccccccC
Q 045493 928 FLKPDSSN----WSELAGTCGYIAPELAYTM------RANEKCDVFNFGVLVLEVIEG----------KHPGHFLSLLLS 987 (1048)
Q Consensus 928 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~Dvws~Gvvl~elltg----------~~p~~~~~~~~~ 987 (1048)
........ .....||+.|+|||++.+. .++.++||||+||++|||++| +.||.....
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~--- 238 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP--- 238 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC---
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCC---
Confidence 76544332 2334799999999999876 445799999999999999999 555432110
Q ss_pred CCcccccchhhhhhhc-cCCCCCCch--hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 988 LPAPAANMNIVVNDLI-DSRLPPPLG--EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 988 ~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
............. ....+.... ........+.+++.+||+.||++|||++|+++.|++
T Consensus 239 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 239 ---NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp ---SSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred ---CCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 0111111111111 111111111 123456789999999999999999999999999874
No 85
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8.7e-38 Score=347.42 Aligned_cols=262 Identities=21% Similarity=0.284 Sum_probs=189.1
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
.....||+|+||.||+|... +++.||+|++.............+++..++.++||||+++++++...+..++||||++
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~- 86 (317)
T 2pmi_A 8 KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD- 86 (317)
T ss_dssp -----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-
T ss_pred eEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-
Confidence 34456899999999999876 5788999998765443333445667788899999999999999999999999999998
Q ss_pred CCHHHHHhccc---cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493 858 GSLATILSNEA---TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 858 g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 163 (317)
T 2pmi_A 87 NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN 163 (317)
T ss_dssp CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence 59999986532 123488999999999999999999999 999999999999999999999999999987765444
Q ss_pred CccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCcccccchhhhhhhcc
Q 045493 935 NWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAANMNIVVNDLID 1004 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 1004 (1048)
......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... +.+....+..........
T Consensus 164 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 243 (317)
T 2pmi_A 164 TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYN 243 (317)
T ss_dssp CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCC
T ss_pred cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcc
Confidence 45566899999999998764 68999999999999999999999986433210 000000000000000000
Q ss_pred CCC----CCCchh------HHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1005 SRL----PPPLGE------VEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1005 ~~~----~~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
+.. +..... .......+.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 244 PNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000 000000 0012346889999999999999999999975
No 86
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.7e-38 Score=352.57 Aligned_cols=248 Identities=21% Similarity=0.245 Sum_probs=192.6
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc--cchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI--GINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|+.+ +++.||+|++........ ......+...+..+ +||||+++++++.+.+..|+||||+
T Consensus 13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~ 92 (345)
T 3a8x_A 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 92 (345)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCC
Confidence 3456899999999999986 578899999876432221 11223445555555 8999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.+++.+.+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.+|++||+|||+++........
T Consensus 93 ~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~ 166 (345)
T 3a8x_A 93 NGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 166 (345)
T ss_dssp CSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCCCc
Confidence 9999999997543 488999999999999999999999 9999999999999999999999999999865544455
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||......... ...........+.......+.
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~i~~~~~~~p~---- 240 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--DQNTEDYLFQVILEKQIRIPR---- 240 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---------CHHHHHHHHHHCCCCCCT----
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccc--ccccHHHHHHHHHcCCCCCCC----
Confidence 56678999999999999999999999999999999999999998642211000 001111122222233222221
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTM 1039 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~ 1039 (1048)
.....+.+++.+||+.||++||++
T Consensus 241 ~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 241 SLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CCCHHHHHHHHHHhcCCHhHCCCC
Confidence 223467889999999999999996
No 87
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=359.59 Aligned_cols=251 Identities=22% Similarity=0.302 Sum_probs=197.4
Q ss_pred ceeeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYE 853 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 853 (1048)
....||+|+||+||+|++. +++.||||++..............++..++.++||||+++++++......++|||
T Consensus 75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEE
Confidence 3456899999999999853 4567999998654433333344556667788899999999999999999999999
Q ss_pred ccCCCCHHHHHhccc----cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC---ceEEeccccc
Q 045493 854 YLERGSLATILSNEA----TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY---KAHVSDFGTA 926 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~---~~kl~DfG~a 926 (1048)
|+++|+|.++++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 999999999997543 223588999999999999999999999 999999999999999655 5999999999
Q ss_pred cccCCCC--CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhc
Q 045493 927 KFLKPDS--SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLI 1003 (1048)
Q Consensus 927 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1048)
+...... .......||+.|+|||++.+..++.++||||+||++|||++ |+.||.... .......+.
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~-----------~~~~~~~i~ 300 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----------NQEVLEFVT 300 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------HHHHHHHHH
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHH
Confidence 8653222 22334568999999999999999999999999999999998 999976322 112222222
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1004 DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1004 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
........ ......+.+++.+||+.||++|||++|+++.|+
T Consensus 301 ~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 301 SGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp TTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCCCCC---ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 22222111 122345888999999999999999999999885
No 88
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.9e-38 Score=351.52 Aligned_cols=245 Identities=22% Similarity=0.300 Sum_probs=189.0
Q ss_pred cceeeecccccccEEEEEE----cCCCceeeEEeccCCCC---cccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAEL----TSGDTRAVKKLHSLPTG---EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv 851 (1048)
.....||+|+||.||+|+. .+++.||+|+++..... ........++..++.++||||+++++++...+..|+|
T Consensus 20 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 99 (327)
T 3a62_A 20 ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLI 99 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred EEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEE
Confidence 3445789999999999987 46889999998764321 1222345567778889999999999999999999999
Q ss_pred EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCC
Q 045493 852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKP 931 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 931 (1048)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 100 LEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 99999999999997543 478899999999999999999999 999999999999999999999999999986554
Q ss_pred CCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493 932 DSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus 932 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+.
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----------~~~~~~~i~~~~~~~p~ 242 (327)
T 3a62_A 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN-----------RKKTIDKILKCKLNLPP 242 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----------HHHHHHHHHHTCCCCCT
T ss_pred CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHhCCCCCCC
Confidence 4444456789999999999999999999999999999999999999986322 11222233332222211
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 045493 1012 GEVEEKLKSMIAVAFLCLDANPDCRP-----TMQKVCN 1044 (1048)
Q Consensus 1012 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 1044 (1048)
.....+.+++.+||+.||++|| ++.|+++
T Consensus 243 ----~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 243 ----YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ----TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ----CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1234678899999999999999 7778875
No 89
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=359.78 Aligned_cols=251 Identities=24% Similarity=0.334 Sum_probs=198.6
Q ss_pred eeeecccccccEEEEEEcC--------CCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEE
Q 045493 781 MVLHGTGGCGTVYKAELTS--------GDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv 851 (1048)
...||+|+||+||+|++.. +..||||++.............++++.++.+ +||||+++++++...+..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 4568999999999998642 2468999987654333223345566667777 899999999999999999999
Q ss_pred EEccCCCCHHHHHhcccc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCce
Q 045493 852 YEYLERGSLATILSNEAT-------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA 918 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~ 918 (1048)
|||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 230 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVM 230 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcCCCcE
Confidence 999999999999976432 23589999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC--CccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccc
Q 045493 919 HVSDFGTAKFLKPDSS--NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANM 995 (1048)
Q Consensus 919 kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 995 (1048)
||+|||+++....... ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||.... .
T Consensus 231 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~-----------~ 299 (382)
T 3tt0_A 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----------V 299 (382)
T ss_dssp EECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------H
T ss_pred EEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-----------H
Confidence 9999999987654332 2334567889999999999999999999999999999999 999976322 1
Q ss_pred hhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 996 NIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
......+......... .....++.+++.+||+.||++|||++|+++.|++
T Consensus 300 ~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 349 (382)
T 3tt0_A 300 EELFKLLKEGHRMDKP---SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349 (382)
T ss_dssp HHHHHHHHTTCCCCCC---SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1122222222111111 1223468889999999999999999999999863
No 90
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=357.77 Aligned_cols=253 Identities=21% Similarity=0.362 Sum_probs=200.2
Q ss_pred cceeeecccccccEEEEEEcC------CCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELTS------GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVY 852 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 852 (1048)
.....||+|+||.||+|++.. ++.||+|+++............+++..++.++||||+++++++.+.+..++||
T Consensus 50 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 129 (343)
T 1luf_A 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLF 129 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEE
Confidence 344568999999999998853 37799999875443333334456777788899999999999999999999999
Q ss_pred EccCCCCHHHHHhcccc---------------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeE
Q 045493 853 EYLERGSLATILSNEAT---------------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVL 911 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIl 911 (1048)
||+++|+|.++++.... ...+++.+++.++.|+++||+|||+. +|+||||||+||+
T Consensus 130 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl 206 (343)
T 1luf_A 130 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCL 206 (343)
T ss_dssp ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred ecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEE
Confidence 99999999999975321 14589999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccccccccCCCC--CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCC
Q 045493 912 LDLEYKAHVSDFGTAKFLKPDS--SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSL 988 (1048)
Q Consensus 912 l~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~ 988 (1048)
++.++.+||+|||+++...... .......+|+.|+|||++.+..++.++||||+||++|||++ |+.||....
T Consensus 207 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~----- 281 (343)
T 1luf_A 207 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA----- 281 (343)
T ss_dssp ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----
T ss_pred ECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC-----
Confidence 9999999999999998654322 12234568899999999999999999999999999999999 999976322
Q ss_pred CcccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 989 PAPAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
.......+.......... .....+.+++.+||+.||++|||+.|++++|++
T Consensus 282 ------~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~ 332 (343)
T 1luf_A 282 ------HEEVIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 332 (343)
T ss_dssp ------HHHHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------hHHHHHHHhCCCcCCCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHH
Confidence 112222233333222211 223468889999999999999999999999863
No 91
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3e-38 Score=356.99 Aligned_cols=241 Identities=21% Similarity=0.221 Sum_probs=189.6
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCccc--chhhHHHHH-HhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIG--INQKGFVSE-ITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~--~~~~~~~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|+.+ +++.||+|++.+....... .....+... ++.++||||+++++++.+.+..|+||||+
T Consensus 42 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~ 121 (373)
T 2r5t_A 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI 121 (373)
T ss_dssp EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCC
Confidence 4557899999999999987 5778999998764322111 111122222 35678999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.+++.+.+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.+|++||+|||+++........
T Consensus 122 ~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~ 195 (373)
T 2r5t_A 122 NGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST 195 (373)
T ss_dssp CSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCC
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCCCc
Confidence 9999999997543 478899999999999999999999 9999999999999999999999999999875544455
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||...+ .......+.......+.
T Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----------~~~~~~~i~~~~~~~~~---- 260 (373)
T 2r5t_A 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----------TAEMYDNILNKPLQLKP---- 260 (373)
T ss_dssp CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB-----------HHHHHHHHHHSCCCCCS----
T ss_pred cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----------HHHHHHHHHhcccCCCC----
Confidence 567789999999999999999999999999999999999999986322 12223333333222211
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQK 1041 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~e 1041 (1048)
.....+.+++.+||+.||++||++.+
T Consensus 261 ~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 261 NITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp SSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 12345788999999999999999853
No 92
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.9e-38 Score=350.95 Aligned_cols=248 Identities=25% Similarity=0.359 Sum_probs=191.9
Q ss_pred ceeeecccccccEEEEEEc-CCCc----eeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDT----RAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY 854 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 854 (1048)
....||+|+||+||+|.+. +++. ||+|.+.............+++..++.++||||+++++++. .+..++||||
T Consensus 17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEe
Confidence 3456899999999999876 4454 66666654443333344566777888899999999999986 4568999999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 96 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 96 LPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp CTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred CCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 9999999999653 23588899999999999999999999 999999999999999999999999999988754432
Q ss_pred --CccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493 935 --NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus 935 --~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
......||+.|+|||++.+..++.++||||+||++|||++ |+.||..... ......+.........
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~ 239 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-----------AEVPDLLEKGERLAQP 239 (325)
T ss_dssp CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-----------THHHHHHHTTCBCCCC
T ss_pred cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-----------HHHHHHHHcCCCCCCC
Confidence 2344567889999999999999999999999999999999 9999864221 1111111111111111
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1012 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
......+.+++.+||+.||++|||++|+++.|+
T Consensus 240 ---~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 240 ---QICTIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp ---TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred ---CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 112235778899999999999999999999886
No 93
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=8.6e-39 Score=365.16 Aligned_cols=246 Identities=20% Similarity=0.252 Sum_probs=195.8
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCC--CCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLP--TGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY 854 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~--~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 854 (1048)
+.....||+|+||+||+|+++ +++.||+|++.+.. .........++...++.++||||+++++++.+.+..|+||||
T Consensus 71 y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 150 (410)
T 3v8s_A 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY 150 (410)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 344567999999999999987 57889999886521 111223345667778889999999999999999999999999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+++|+|.+++++. .+++..+..++.||+.||+|||+. +|+||||||+||+++.+|++||+|||+|+.......
T Consensus 151 ~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 151 MPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp CTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 9999999999643 378899999999999999999999 999999999999999999999999999987654332
Q ss_pred -CccccccccccccccccccCC----CCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccC----
Q 045493 935 -NWSELAGTCGYIAPELAYTMR----ANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDS---- 1005 (1048)
Q Consensus 935 -~~~~~~gt~~y~aPE~~~~~~----~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 1005 (1048)
.....+||+.|+|||++.+.. ++.++||||+||++|||++|+.||...+. ......+...
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----------~~~~~~i~~~~~~~ 292 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----------VGTYSKIMNHKNSL 292 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHTHHHHC
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-----------hhHHHHHHhccccc
Confidence 234578999999999998765 78999999999999999999999863221 1122222211
Q ss_pred CCCCCchhHHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 045493 1006 RLPPPLGEVEEKLKSMIAVAFLCLDANPDC--RPTMQKVCNL 1045 (1048)
Q Consensus 1006 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 1045 (1048)
..+.. ......+.+++.+||+.+|++ ||+++|++++
T Consensus 293 ~~p~~----~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 293 TFPDD----NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCTT----CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cCCCc----ccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 12211 122346788899999999999 9999999863
No 94
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-38 Score=352.81 Aligned_cols=242 Identities=19% Similarity=0.292 Sum_probs=193.0
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
-...||+|+||.||+|++. +++.||+|++..... .+......+++..++.++||||+++++++...+..++||||+
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 3456899999999999974 788999999864321 122234556777788999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 92 ~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~-~~~ 164 (336)
T 3h4j_B 92 GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-NFL 164 (336)
T ss_dssp CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS-BTT
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC-ccc
Confidence 679999986543 489999999999999999999999 9999999999999999999999999999876543 334
Q ss_pred cccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 937 SELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
...+||+.|+|||++.+..+ +.++||||+||++|||++|+.||+..... .....+.......+ .
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-----------~~~~~i~~~~~~~p----~ 229 (336)
T 3h4j_B 165 KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-----------NLFKKVNSCVYVMP----D 229 (336)
T ss_dssp CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-----------TCBCCCCSSCCCCC----T
T ss_pred ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-----------HHHHHHHcCCCCCc----c
Confidence 55689999999999988776 78999999999999999999998642211 01111111111111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....+.+++.+||+.||++|||++|+++
T Consensus 230 ~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 230 FLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 12345788999999999999999999975
No 95
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-38 Score=348.05 Aligned_cols=241 Identities=24% Similarity=0.315 Sum_probs=195.2
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCC--cccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG--EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|+.+ +++.||+|++...... .......++...++.++||||+++++++.+.+..|+||||++
T Consensus 10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 3456899999999999886 6889999998653211 112233456666788899999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.++++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.+|++||+|||+++.... ..
T Consensus 90 gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~---~~ 160 (318)
T 1fot_A 90 GGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VT 160 (318)
T ss_dssp SCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS---CB
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC---cc
Confidence 999999997543 488999999999999999999999 999999999999999999999999999987543 23
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
...+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+. .
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----------~~~~~~~i~~~~~~~p~----~ 225 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-----------TMKTYEKILNAELRFPP----F 225 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----------HHHHHHHHHHCCCCCCT----T
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCCC----C
Confidence 35689999999999999999999999999999999999999986322 11222333333322221 1
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRP-----TMQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 1044 (1048)
...++.+++.+|++.||++|| +++|+++
T Consensus 226 ~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 226 FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 234678899999999999999 8888875
No 96
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.5e-38 Score=360.89 Aligned_cols=254 Identities=22% Similarity=0.309 Sum_probs=195.9
Q ss_pred CcceeeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCC-eEE
Q 045493 778 EGKMVLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQ-HLF 849 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~-~~~ 849 (1048)
+.....||+|+||.||+|++. +++.||||++..............+++.+.++ +||||+++++++.+.+ ..+
T Consensus 24 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~ 103 (359)
T 3vhe_A 24 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 103 (359)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCE
T ss_pred eeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceE
Confidence 334557899999999999743 35689999997644333333345566667777 7999999999997754 489
Q ss_pred EEEEccCCCCHHHHHhcccc------------------------------------------------------------
Q 045493 850 LVYEYLERGSLATILSNEAT------------------------------------------------------------ 869 (1048)
Q Consensus 850 lv~e~~~~g~L~~~l~~~~~------------------------------------------------------------ 869 (1048)
+||||+++|+|.++++....
T Consensus 104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (359)
T 3vhe_A 104 VIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPE 183 (359)
T ss_dssp EEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------
T ss_pred EEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccccc
Confidence 99999999999999975432
Q ss_pred ---ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC--ccccccccc
Q 045493 870 ---AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCG 944 (1048)
Q Consensus 870 ---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~ 944 (1048)
...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ .....||+.
T Consensus 184 ~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~ 260 (359)
T 3vhe_A 184 DLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260 (359)
T ss_dssp CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred chhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCce
Confidence 11288999999999999999999999 9999999999999999999999999999876443322 234568899
Q ss_pred cccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHHHHHHH
Q 045493 945 YIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIA 1023 (1048)
Q Consensus 945 y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1023 (1048)
|+|||++.+..++.++||||+||++|||++ |+.||..... .......+......... ......+.+
T Consensus 261 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----------~~~~~~~~~~~~~~~~~---~~~~~~l~~ 327 (359)
T 3vhe_A 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----------DEEFCRRLKEGTRMRAP---DYTTPEMYQ 327 (359)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----------SHHHHHHHHHTCCCCCC---TTCCHHHHH
T ss_pred eEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch----------hHHHHHHHHcCCCCCCC---CCCCHHHHH
Confidence 999999999999999999999999999998 9999863221 11111111111111111 112345888
Q ss_pred HHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1024 VAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1024 l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
++.+||+.||++|||++|++++|+
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHH
Confidence 999999999999999999999986
No 97
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.3e-38 Score=359.15 Aligned_cols=246 Identities=20% Similarity=0.249 Sum_probs=184.7
Q ss_pred eeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHH-hhcccCceeeEeeEeee----CCeEEEEEEcc
Q 045493 782 VLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEI-TEIRHRNIVKFYGFCSH----TQHLFLVYEYL 855 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l-~~l~h~niv~~~~~~~~----~~~~~lv~e~~ 855 (1048)
..||+|+||+||+|.+. +++.||||++... ....+++..+ +..+||||+++++++.. ....|+||||+
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~ 141 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 141 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeC
Confidence 46899999999999886 6788999998532 1233344443 45589999999998865 56789999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC---CCceEEeccccccccCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL---EYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~---~~~~kl~DfG~a~~~~~~ 932 (1048)
++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 142 ~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 142 DGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp CSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 9999999997543 23589999999999999999999999 9999999999999997 789999999999865432
Q ss_pred CCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493 933 SSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus 933 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||......... ......+..+....+..
T Consensus 218 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-------~~~~~~i~~~~~~~~~~ 289 (400)
T 1nxk_A 218 -NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------PGMKTRIRMGQYEFPNP 289 (400)
T ss_dssp ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-------CSHHHHHHHTCCCCCTT
T ss_pred -CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-------HHHHHHHHcCcccCCCc
Confidence 2334568999999999999999999999999999999999999998743321110 01111122222222211
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
.+.....++.+++.+||+.||++|||++|+++.
T Consensus 290 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 222344568899999999999999999999874
No 98
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.7e-38 Score=344.98 Aligned_cols=257 Identities=19% Similarity=0.267 Sum_probs=192.2
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||+||+|++. +++.||+|++........ .....+++..+++++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 3456899999999999886 578899999875443221 23344567777889999999999999999999999999987
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 86 -~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (292)
T 3o0g_A 86 -DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159 (292)
T ss_dssp -EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCC
T ss_pred -CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcccccc
Confidence 566555432 23489999999999999999999999 999999999999999999999999999987765555556
Q ss_pred ccccccccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCcccccc----------cCCCcccccchhhhhhhccCC
Q 045493 938 ELAGTCGYIAPELAYTMR-ANEKCDVFNFGVLVLEVIEGKHPGHFLSLL----------LSLPAPAANMNIVVNDLIDSR 1006 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gvvl~elltg~~p~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 1006 (1048)
...||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... ...+....+ .......+..
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~ 237 (292)
T 3o0g_A 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW--PSMTKLPDYK 237 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTC--TTGGGSTTCC
T ss_pred CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhh--hhhccccccc
Confidence 678999999999998766 799999999999999999998885321110 000000000 0000000000
Q ss_pred -------CCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1007 -------LPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1007 -------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
..............+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000011123456789999999999999999999986
No 99
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.3e-38 Score=354.74 Aligned_cols=246 Identities=23% Similarity=0.333 Sum_probs=194.0
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|+.. +++.||+|++..... .........+++.++.++|||||++++++.+.+..|+||||++
T Consensus 19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 3456899999999999886 577899998865321 1112233456777788999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.+|.+||+|||+++.+... ...
T Consensus 99 gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~ 171 (384)
T 4fr4_A 99 GGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQI 171 (384)
T ss_dssp TEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-CCB
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC-Cce
Confidence 99999999753 3489999999999999999999999 9999999999999999999999999999876533 344
Q ss_pred ccccccccccccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493 937 SELAGTCGYIAPELAYT---MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~---~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
...+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .........+.......+
T Consensus 172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~--------~~~~~~~~~~~~~~~~~p--- 240 (384)
T 4fr4_A 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS--------TSSKEIVHTFETTVVTYP--- 240 (384)
T ss_dssp CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT--------SCHHHHHHHHHHCCCCCC---
T ss_pred eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC--------ccHHHHHHHHhhcccCCC---
Confidence 56789999999999864 4589999999999999999999999863221 111112222222222211
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPT-MQKVCN 1044 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~ 1044 (1048)
......+.+++.+||+.||++||+ ++++.+
T Consensus 241 -~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 241 -SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 122346889999999999999998 777654
No 100
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.1e-38 Score=343.38 Aligned_cols=260 Identities=24% Similarity=0.319 Sum_probs=190.9
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||+||+|+..+++.||+|++....... ......+++..++.++||||+++++++...+..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 345689999999999999889999999986543322 123344567777888999999999999999999999999986
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCccc
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 938 (1048)
+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 85 ~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (288)
T 1ob3_A 85 DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159 (288)
T ss_dssp EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccc
Confidence 999998653 23488999999999999999999999 9999999999999999999999999999876544444455
Q ss_pred cccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCcccccchhhhhhhccCCCC
Q 045493 939 LAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAANMNIVVNDLIDSRLP 1008 (1048)
Q Consensus 939 ~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 1008 (1048)
..||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ..+....+.........++...
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T 1ob3_A 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239 (288)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC
T ss_pred ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccc
Confidence 6789999999998764 58999999999999999999999986432110 0000000000000000011110
Q ss_pred ----CCch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1009 ----PPLG-EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1009 ----~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
.+.. ........+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 011223567899999999999999999999863
No 101
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.5e-38 Score=349.24 Aligned_cols=252 Identities=23% Similarity=0.338 Sum_probs=198.4
Q ss_pred ceeeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYE 853 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 853 (1048)
....||+|+||.||+|.+. +++.||+|++.............++++.++.++||||+++++++.+.+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 3456899999999999863 3467899998754333322334556777788899999999999999999999999
Q ss_pred ccCCCCHHHHHhcccc---------------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE
Q 045493 854 YLERGSLATILSNEAT---------------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL 912 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll 912 (1048)
|+++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+||++
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~NIli 183 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILV 183 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchheEEE
Confidence 9999999999975432 23488999999999999999999999 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCC
Q 045493 913 DLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLP 989 (1048)
Q Consensus 913 ~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~ 989 (1048)
+.++.+||+|||+++........ .....+|+.|+|||++.+..++.++||||+||++|||++ |+.||.....
T Consensus 184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----- 258 (314)
T 2ivs_A 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP----- 258 (314)
T ss_dssp ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 99999999999999876543322 233457889999999998889999999999999999999 9999863221
Q ss_pred cccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 990 APAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
......+......... ......+.+++.+||+.||++|||++|+++.|++
T Consensus 259 ------~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 259 ------ERLFNLLKTGHRMERP---DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308 (314)
T ss_dssp ------GGHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------HHHHHHhhcCCcCCCC---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1111112121111111 1233468899999999999999999999999863
No 102
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.5e-38 Score=350.68 Aligned_cols=248 Identities=19% Similarity=0.324 Sum_probs=187.9
Q ss_pred ceeeecccccccEEEEEEc-CCCc----eeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDT----RAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY 854 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 854 (1048)
....||+|+||+||+|++. +++. ||+|++.............+++..+++++||||++++++|.... .++|+||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~ 97 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEEC
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEe
Confidence 4457899999999999875 4444 46776654433333344556777788899999999999998755 7899999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 98 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 98 MPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp CTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred cCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 99999999997532 3588999999999999999999999 999999999999999999999999999987654433
Q ss_pred C--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493 935 N--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus 935 ~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
. .....+|+.|+|||++.+..++.++||||+||++|||++ |+.||..... ......+......+..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~ 241 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----------SEISSILEKGERLPQP 241 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----------GGHHHHHHTTCCCCCC
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH-----------HHHHHHHHcCCCCCCC
Confidence 2 233456889999999999999999999999999999999 9999864221 1111111111111111
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1012 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
......+.+++.+||+.||++|||++|+++.|+
T Consensus 242 ---~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 242 ---PICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp ---TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred ---ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 123346888999999999999999999999885
No 103
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6.4e-38 Score=351.96 Aligned_cols=241 Identities=20% Similarity=0.239 Sum_probs=196.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCC--cccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG--EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|+.. +++.||+|++...... ........+.+.++.++||||+++++++.+.+..|+||||++
T Consensus 45 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 124 (350)
T 1rdq_E 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124 (350)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 4457899999999999986 6889999998653211 112233456667788899999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.+|.+||+|||+++..... .
T Consensus 125 gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~---~ 195 (350)
T 1rdq_E 125 GGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---T 195 (350)
T ss_dssp TCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---B
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC---c
Confidence 999999997543 488999999999999999999999 9999999999999999999999999999876432 3
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
...+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+..+....+. .
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----------~~~~~~~i~~~~~~~p~----~ 260 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----------PIQIYEKIVSGKVRFPS----H 260 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCT----T
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-----------HHHHHHHHHcCCCCCCC----C
Confidence 35679999999999999999999999999999999999999986322 12223333333332221 2
Q ss_pred HHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPT-----MQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 1044 (1048)
....+.+++.+||+.||++||+ ++|+++
T Consensus 261 ~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 2346888999999999999998 888875
No 104
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=7e-38 Score=345.35 Aligned_cols=245 Identities=20% Similarity=0.275 Sum_probs=189.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-------------------------ccchhhHHHHHHhhcccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-------------------------IGINQKGFVSEITEIRHR 833 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-------------------------~~~~~~~~~~~l~~l~h~ 833 (1048)
....||+|+||.||+|++. +++.||+|++....... ......++++.++.++||
T Consensus 17 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 96 (298)
T 2zv2_A 17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP 96 (298)
T ss_dssp EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCT
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCC
Confidence 3456899999999999876 67889999986543211 112345677778889999
Q ss_pred ceeeEeeEeee--CCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeE
Q 045493 834 NIVKFYGFCSH--TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVL 911 (1048)
Q Consensus 834 niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIl 911 (1048)
||+++++++.+ .+..|+||||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLL 169 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEE
Confidence 99999999976 568999999999999987653 23589999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccccccccCCCCCCccccccccccccccccccCC---CCchhhHHHHHHHHHHHHhCCCCCcccccccCC
Q 045493 912 LDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMR---ANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSL 988 (1048)
Q Consensus 912 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~ 988 (1048)
++.++.+||+|||+++.............||+.|+|||++.+.. ++.++||||+||++|||++|+.||.....
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~---- 245 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI---- 245 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH----
T ss_pred ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH----
Confidence 99999999999999987765544455678999999999998765 37889999999999999999999863221
Q ss_pred CcccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 989 PAPAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
......+.......+. .......+.+++.+||+.||++|||++|+++
T Consensus 246 -------~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 -------MCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -------HHHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -------HHHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1111111111111110 0122345888999999999999999999975
No 105
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1e-37 Score=344.75 Aligned_cols=249 Identities=22% Similarity=0.345 Sum_probs=187.5
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
...||+|+||+||+|++. ..+|+|+++...... ......+++..++.++||||+++++++.. +..++||||+++|+
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~~~~~~ 117 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSS 117 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCB
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEecCCCCc
Confidence 456899999999999875 358888876543322 12234556677788999999999998764 55899999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC--CCCcc
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD--SSNWS 937 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~--~~~~~ 937 (1048)
|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 118 L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~ 192 (307)
T 3lb7_A 118 LYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192 (307)
T ss_dssp HHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-----------
T ss_pred HHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccccccccc
Confidence 99999643 34589999999999999999999999 9999999999999999999999999999865422 22334
Q ss_pred ccccccccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCC-chh
Q 045493 938 ELAGTCGYIAPELAY---TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP-LGE 1013 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1013 (1048)
...||+.|+|||++. +..++.++||||+||++|||++|+.||..... ..............+. ...
T Consensus 193 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~----------~~~~~~~~~~~~~~~~~~~~ 262 (307)
T 3lb7_A 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN----------RDQIIFMVGRGYASPDLSKL 262 (307)
T ss_dssp -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----------HHHHHHHHHHTCCCCCSTTS
T ss_pred CCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc----------HHHHHHHHhcCCCCcchhhh
Confidence 567999999999986 56789999999999999999999999863221 1111111111111111 111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.......+.+++.+||+.||++|||+.|+++.|+
T Consensus 263 ~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 263 YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 1223456889999999999999999999999886
No 106
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.2e-37 Score=345.04 Aligned_cols=249 Identities=17% Similarity=0.216 Sum_probs=199.5
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-----cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-----GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVY 852 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-----~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 852 (1048)
.....||+|+||.||+|+.. +++.||+|++........ .....+++..++.++||||+++++++.+.+..++||
T Consensus 15 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (321)
T 2a2a_A 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLIL 94 (321)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEE
Confidence 34456899999999999886 688899999876543221 123455677778899999999999999999999999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC----ceEEeccccccc
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY----KAHVSDFGTAKF 928 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~----~~kl~DfG~a~~ 928 (1048)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.
T Consensus 95 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 95 ELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp CCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 999999999999653 3478999999999999999999999 999999999999999887 799999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCC
Q 045493 929 LKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLP 1008 (1048)
Q Consensus 929 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1048)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+......
T Consensus 169 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----------~~~~~~~i~~~~~~ 236 (321)
T 2a2a_A 169 IEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----------KQETLANITSVSYD 236 (321)
T ss_dssp CCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----------HHHHHHHHHTTCCC
T ss_pred cCcc-ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHhcccc
Confidence 6543 23345679999999999999999999999999999999999999986322 11222222222222
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1009 PPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1009 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
.+..........+.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 2221122334568899999999999999999999863
No 107
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=354.49 Aligned_cols=250 Identities=18% Similarity=0.211 Sum_probs=197.9
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
+.....||+|+||.||+|... +++.+|+|++...... ......+++..++.++||||+++++++.+.+..++||||++
T Consensus 53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 131 (387)
T 1kob_A 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL-DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131 (387)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH-HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchh-hHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence 344557899999999999886 5778888887653321 12344567777889999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC--CCceEEeccccccccCCCCC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL--EYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~--~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++..... .
T Consensus 132 gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~-~ 205 (387)
T 1kob_A 132 GGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-E 205 (387)
T ss_dssp CCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT-S
T ss_pred CCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCC-c
Confidence 99999998643 23589999999999999999999999 9999999999999984 478999999999876543 2
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+............
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----------~~~~~~i~~~~~~~~~~~~ 274 (387)
T 1kob_A 206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-----------LETLQNVKRCDWEFDEDAF 274 (387)
T ss_dssp CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-----------HHHHHHHHHCCCCCCSSTT
T ss_pred ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhCCCCCCcccc
Confidence 33455799999999999999999999999999999999999999864321 1111222222211111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
.....++.+++.+||+.||++|||++|+++.
T Consensus 275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 2334568899999999999999999999863
No 108
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.4e-38 Score=367.00 Aligned_cols=244 Identities=20% Similarity=0.233 Sum_probs=190.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCC--CCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLP--TGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~--~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|+.. +++.||+|++.... ..........+.+.++.++||||+++++++...+..|+||||++
T Consensus 152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 4457899999999999876 68899999986532 11111223345555677889999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH-DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
+|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+|+........
T Consensus 232 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 305 (446)
T 4ejn_A 232 GGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 305 (446)
T ss_dssp SCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC----
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcc
Confidence 999999997543 48899999999999999999998 7 9999999999999999999999999999876555555
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+.
T Consensus 306 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----------~~~~~~~i~~~~~~~p~---- 370 (446)
T 4ejn_A 306 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----------HEKLFELILMEEIRFPR---- 370 (446)
T ss_dssp -CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCT----
T ss_pred cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----------HHHHHHHHHhCCCCCCc----
Confidence 566789999999999999999999999999999999999999986322 11222222222222211
Q ss_pred HHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRP-----TMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 1044 (1048)
.....+.+++.+||+.||++|| |++|+++
T Consensus 371 ~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 371 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1234678899999999999999 9999986
No 109
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-37 Score=343.37 Aligned_cols=251 Identities=16% Similarity=0.192 Sum_probs=197.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|... +++.||+|++...... ....++++.+..+ +|++++++++++.+....++||||+ +
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 89 (298)
T 1csn_A 14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA---PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-G 89 (298)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS---CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc---HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-C
Confidence 3456899999999999874 6889999988654322 2455667777777 7999999999999999999999999 9
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc-----eEEeccccccccCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK-----AHVSDFGTAKFLKPD 932 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~-----~kl~DfG~a~~~~~~ 932 (1048)
|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.....
T Consensus 90 ~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 90 PSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp CBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred CCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 99999997532 3489999999999999999999999 9999999999999988776 999999999876543
Q ss_pred CC-------CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccC
Q 045493 933 SS-------NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDS 1005 (1048)
Q Consensus 933 ~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1048)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........+...
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~ 236 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA--------TNKQKYERIGEK 236 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC--------CHHHHHHHHHHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc--------ccHHHHHHHHhh
Confidence 22 134567999999999999999999999999999999999999998743210 111111111111
Q ss_pred CCCCCc-hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1006 RLPPPL-GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1006 ~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
....+. .........+.+++.+||+.||++|||++++++.|+
T Consensus 237 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 237 KQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred ccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 111110 001123456889999999999999999999999886
No 110
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=9.9e-38 Score=341.48 Aligned_cols=246 Identities=21% Similarity=0.359 Sum_probs=195.3
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCCH
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSL 860 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 860 (1048)
...||+|+||+||+|++.++..||+|++....... ....++++.+..++||||+++++++.+.+..++||||+++|+|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 106 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE--DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCH--HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH--HHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcH
Confidence 45689999999999999988899999997543322 3345677778889999999999999999999999999999999
Q ss_pred HHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC-CCcccc
Q 045493 861 ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS-SNWSEL 939 (1048)
Q Consensus 861 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~~~ 939 (1048)
.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ......
T Consensus 107 ~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 181 (283)
T 3gen_A 107 LNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 181 (283)
T ss_dssp HHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTST
T ss_pred HHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccccccCC
Confidence 9999653 23489999999999999999999999 99999999999999999999999999998664321 112234
Q ss_pred ccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHH
Q 045493 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKL 1018 (1048)
Q Consensus 940 ~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1048)
.+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+.......... ...
T Consensus 182 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~~---~~~ 247 (283)
T 3gen_A 182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-----------SETAEHIAQGLRLYRPH---LAS 247 (283)
T ss_dssp TSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----------HHHHHHHHTTCCCCCCT---TCC
T ss_pred ccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh-----------hHHHHHHhcccCCCCCC---cCC
Confidence 56788999999999999999999999999999998 9999863221 11122222221111111 112
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1019 KSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1019 ~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
..+.+++.+||+.||++|||++|+++.|+
T Consensus 248 ~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 248 EKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 45888999999999999999999999886
No 111
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=351.71 Aligned_cols=252 Identities=21% Similarity=0.329 Sum_probs=196.0
Q ss_pred ceeeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVY 852 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 852 (1048)
....||+|+||.||+|++. ++..||+|++..............++..+.++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 3457899999999999862 34579999987554433344456677778888 8999999999999999999999
Q ss_pred EccCCCCHHHHHhccccc--------------------cccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE
Q 045493 853 EYLERGSLATILSNEATA--------------------AELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL 912 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll 912 (1048)
||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll 205 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLV 205 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEE
Confidence 999999999999754321 2378999999999999999999999 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCC
Q 045493 913 DLEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLP 989 (1048)
Q Consensus 913 ~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~ 989 (1048)
+.++.+||+|||++......... .....||+.|+|||++.+..++.++||||+||++|||+| |+.||.....
T Consensus 206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----- 280 (344)
T 1rjb_A 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV----- 280 (344)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-----
T ss_pred cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc-----
Confidence 99999999999999876544332 234457889999999999999999999999999999998 9999864221
Q ss_pred cccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 990 APAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
................ .......+.+++.+||+.||++|||+.|++++|+
T Consensus 281 ------~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 281 ------DANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp ------SHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------HHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1111111111111110 0122346888999999999999999999999986
No 112
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=353.11 Aligned_cols=246 Identities=21% Similarity=0.261 Sum_probs=193.4
Q ss_pred eeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
.+.||+|+||.||+|+.. +++.||+|++...... ......+++..++.++||||+++++++.+.+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK-DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHH-HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 456899999999999875 6888999998754322 22344567777888999999999999999999999999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE--CCCCceEEeccccccccCCCCCCcc
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL--DLEYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll--~~~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.+.... ...
T Consensus 173 L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~~~ 246 (373)
T 2x4f_A 173 LFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-KLK 246 (373)
T ss_dssp EHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-BCC
T ss_pred HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-ccc
Confidence 99998643 23488999999999999999999999 99999999999999 567899999999998765432 334
Q ss_pred ccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493 938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
..+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+...............
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----------~~~~~~i~~~~~~~~~~~~~~~ 315 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-----------AETLNNILACRWDLEDEEFQDI 315 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHHTCCCSCSGGGTTS
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhccCCCChhhhccC
Confidence 45799999999999988999999999999999999999999863221 1222233333322222222334
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1018 LKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...+.+++.+||+.||++|||++|+++
T Consensus 316 ~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 316 SEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 457889999999999999999999987
No 113
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7.2e-38 Score=349.54 Aligned_cols=254 Identities=19% Similarity=0.309 Sum_probs=199.6
Q ss_pred CcceeeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEE
Q 045493 778 EGKMVLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv 851 (1048)
+.....||+|+||.||+|.+. +++.||+|++.............+++..++.++||||+++++++.+.+..++|
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 106 (322)
T 1p4o_A 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 106 (322)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEE
Confidence 344567899999999999765 36789999987543333223345567777888999999999999999999999
Q ss_pred EEccCCCCHHHHHhcccc-------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccc
Q 045493 852 YEYLERGSLATILSNEAT-------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFG 924 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG 924 (1048)
|||+++|+|.++++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEECcCc
Confidence 999999999999965321 13468899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhh
Q 045493 925 TAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVND 1001 (1048)
Q Consensus 925 ~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1048)
+++........ .....+|+.|+|||++.+..++.++||||+||++|||++ |+.||.... .......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----------~~~~~~~ 252 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----------NEQVLRF 252 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----------HHHHHHH
T ss_pred cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC-----------HHHHHHH
Confidence 99866433221 223456889999999999999999999999999999999 888876322 1122222
Q ss_pred hccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1002 LIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
+.......... .....+.+++.+||+.||++|||+.|+++.|++
T Consensus 253 ~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~ 296 (322)
T 1p4o_A 253 VMEGGLLDKPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296 (322)
T ss_dssp HHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred HHcCCcCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 22222222211 223457889999999999999999999999863
No 114
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-37 Score=351.89 Aligned_cols=259 Identities=22% Similarity=0.207 Sum_probs=196.5
Q ss_pred hcccCCcceeeecccccccEEEEEEc-CCCceeeEEeccCC----CCcccchhhHHHHHHhhcccCceeeEeeEeeeCCe
Q 045493 773 SASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLP----TGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQH 847 (1048)
Q Consensus 773 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~----~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 847 (1048)
...+.+.....||+|+||+||+|... +++.||+|++.... .........++++.++.++||||+++++++.+.+.
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 102 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY 102 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence 33333445567999999999999885 67788999886532 11222334556777888999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhccc-------------------------------------cccccCHHHHHHHHHHHHHHHH
Q 045493 848 LFLVYEYLERGSLATILSNEA-------------------------------------TAAELDWSKRVNVIKGVANALS 890 (1048)
Q Consensus 848 ~~lv~e~~~~g~L~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~~i~~~L~ 890 (1048)
.++||||+++|+|.+++.... ....+++..+..++.|++.||+
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 182 (345)
T 3hko_A 103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH 182 (345)
T ss_dssp EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence 999999999999999985211 0112456778899999999999
Q ss_pred HHHhCCCCCeEeeCCCCCCeEECCCC--ceEEeccccccccCCCCC----Ccccccccccccccccccc--CCCCchhhH
Q 045493 891 YMHHDCFPPILHRDISSKKVLLDLEY--KAHVSDFGTAKFLKPDSS----NWSELAGTCGYIAPELAYT--MRANEKCDV 962 (1048)
Q Consensus 891 ~LH~~~~~~iiH~Dik~~NIll~~~~--~~kl~DfG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv 962 (1048)
|||+. +|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+ ..++.++||
T Consensus 183 ~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di 259 (345)
T 3hko_A 183 YLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259 (345)
T ss_dssp HHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred HHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence 99999 999999999999998776 899999999986543221 2345679999999999875 678999999
Q ss_pred HHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 045493 963 FNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042 (1048)
Q Consensus 963 ws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 1042 (1048)
||+||++|||++|+.||.... .......+..................+.+++.+||+.||++|||+.|+
T Consensus 260 wslG~il~el~~g~~pf~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 260 WSAGVLLHLLLMGAVPFPGVN-----------DADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCC-----------hHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 999999999999999986322 122233333333333333333345678899999999999999999999
Q ss_pred HHH
Q 045493 1043 CNL 1045 (1048)
Q Consensus 1043 l~~ 1045 (1048)
++.
T Consensus 329 l~h 331 (345)
T 3hko_A 329 LQH 331 (345)
T ss_dssp HHS
T ss_pred hcC
Confidence 873
No 115
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=8.9e-38 Score=339.53 Aligned_cols=249 Identities=26% Similarity=0.430 Sum_probs=184.2
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCccc---chhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIG---INQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~---~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|.+. ++.||||++......... ....++...++.++||||+++++++.+.+..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 3456899999999999986 889999998764333222 233456666788899999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC--------CCceEEeccccccc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL--------EYKAHVSDFGTAKF 928 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~--------~~~~kl~DfG~a~~ 928 (1048)
+|+|.++++. ..+++..+..++.|++.|++|||+....+|+||||||+||+++. ++.+||+|||.++.
T Consensus 90 ~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~ 165 (271)
T 3dtc_A 90 GGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165 (271)
T ss_dssp TEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred CCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence 9999999853 34889999999999999999999992223999999999999986 67899999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCC
Q 045493 929 LKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLP 1008 (1048)
Q Consensus 929 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1048)
..... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .............
T Consensus 166 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~ 232 (271)
T 3dtc_A 166 WHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG-----------LAVAYGVAMNKLA 232 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH-----------HHHHHHHHTSCCC
T ss_pred ccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHhhhcCCCC
Confidence 64332 2245789999999999999999999999999999999999999864321 1111111111111
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1009 PPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1009 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
... .......+.+++.+||+.||++|||++|++++|++
T Consensus 233 ~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 233 LPI--PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp CCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CCC--CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 111 11223468889999999999999999999999975
No 116
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=343.36 Aligned_cols=243 Identities=22% Similarity=0.231 Sum_probs=185.5
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCccc-chhhHHHHHH-hhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIG-INQKGFVSEI-TEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~-~~~~~~~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
.....||+|+||+||+|++. +++.||||++......... .....++..+ ...+||||++++++|.+.+..++||||+
T Consensus 60 ~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~ 139 (311)
T 3p1a_A 60 QRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC 139 (311)
T ss_dssp EEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc
Confidence 34456899999999999987 7889999987654332211 1111222222 3338999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
+|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 140 -~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-~~ 212 (311)
T 3p1a_A 140 -GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-GA 212 (311)
T ss_dssp -CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred -CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccC-CC
Confidence 669999886543 3589999999999999999999999 9999999999999999999999999999876433 22
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
.....||+.|+|||++.+ .++.++||||+||++|||++|..|+..... ...+.....+ .....
T Consensus 213 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--------------~~~~~~~~~~--~~~~~ 275 (311)
T 3p1a_A 213 GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--------------WQQLRQGYLP--PEFTA 275 (311)
T ss_dssp --CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--------------HHHHTTTCCC--HHHHT
T ss_pred CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--------------HHHHhccCCC--ccccc
Confidence 344569999999998876 799999999999999999999776442211 1112222211 11122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
.....+.+++.+||+.||++|||++|+++.
T Consensus 276 ~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 276 GLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 234578899999999999999999999863
No 117
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=8.5e-38 Score=364.92 Aligned_cols=248 Identities=20% Similarity=0.342 Sum_probs=197.6
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
....||+|+||.||+|.+.++..||||+++.... ......++++.++.++||||+++++++. .+..++||||+++|+
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~ 268 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGS 268 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCB
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCCc--cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCc
Confidence 3456899999999999998888999999875332 2234556777788999999999999987 567899999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-Cccc
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS-NWSE 938 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~ 938 (1048)
|.++++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....
T Consensus 269 L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 269 LLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp HHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred HHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 999997532 23478899999999999999999999 999999999999999999999999999987643211 1223
Q ss_pred cccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus 939 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
..+|+.|+|||++....++.++|||||||++|||+| |+.||..... ......+..+...+.. ...
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~-----------~~~~~~i~~~~~~~~~---~~~ 410 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-----------PEVIRALERGYRMPRP---ENC 410 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----------HHHHHHHHHTCCCCCC---TTS
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHcCCCCCCC---CCC
Confidence 446789999999998999999999999999999999 9999863221 1122222222111111 123
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
...+.+++.+||+.||++|||++++++.|+.
T Consensus 411 ~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~ 441 (454)
T 1qcf_A 411 PEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441 (454)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 4568899999999999999999999999874
No 118
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.8e-38 Score=349.44 Aligned_cols=259 Identities=18% Similarity=0.235 Sum_probs=187.2
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||+||+|+.. +++.||+|++.............++++.++.++||||+++++++...+..++||||+++
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK- 84 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc-
Confidence 3456899999999999887 68889999986544333333344567788899999999999999999999999999985
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCccc
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 938 (1048)
+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 85 ~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 159 (324)
T 3mtl_A 85 DLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN 159 (324)
T ss_dssp EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccc
Confidence 9999986532 3488999999999999999999999 9999999999999999999999999999876554445556
Q ss_pred ccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCccccc----chhhhhhhcc
Q 045493 939 LAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAAN----MNIVVNDLID 1004 (1048)
Q Consensus 939 ~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~----~~~~~~~~~~ 1004 (1048)
..||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... +.+..... ..........
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (324)
T 3mtl_A 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY 239 (324)
T ss_dssp ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCC
T ss_pred ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccc
Confidence 678999999999876 568999999999999999999999986433110 00000000 0000001000
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1005 SRLPPP--LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1005 ~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
+..... ..........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 110000 0011122356789999999999999999999986
No 119
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.5e-38 Score=345.70 Aligned_cols=260 Identities=22% Similarity=0.315 Sum_probs=192.9
Q ss_pred ceeeecccccccEEEEEE-----cCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee--CCeEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAEL-----TSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH--TQHLFLVY 852 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 852 (1048)
....||+|+||+||+|++ .+++.||||++..... .......+++..++.++||||+++++++.. ....++||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 92 (295)
T 3ugc_A 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92 (295)
T ss_dssp EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEE
T ss_pred hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEE
Confidence 345689999999999984 2578899999864322 112234566777888999999999999854 45689999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 93 EYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp ECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 9999999999997542 3488999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCC---ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccc-----cCCCcccccchhhhhhhcc
Q 045493 933 SSN---WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLL-----LSLPAPAANMNIVVNDLID 1004 (1048)
Q Consensus 933 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 1004 (1048)
... .....+|..|+|||++.+..++.++||||+|+++|||++|..||...... ...................
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 321 22345778899999999999999999999999999999999997643211 0111111111111112222
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1005 SRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1005 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
....+.. ......+.+++.+||+.||++|||++|+++.|++
T Consensus 248 ~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 248 NGRLPRP---DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp TCCCCCC---TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cCcCCCC---cCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 2111111 2234568889999999999999999999999863
No 120
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.2e-38 Score=363.16 Aligned_cols=248 Identities=20% Similarity=0.247 Sum_probs=195.5
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY 854 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 854 (1048)
+.....||+|+||+||+|+++ +++.||+|++.+... ........++...+..++||||++++++|.+.+..|+||||
T Consensus 76 y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey 155 (437)
T 4aw2_A 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDY 155 (437)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEec
Confidence 344567999999999999987 467889998865211 11122345667777888999999999999999999999999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+++|+|.+++.+. ...+++..++.++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+.......
T Consensus 156 ~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 156 YVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp CTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 9999999999752 23489999999999999999999999 999999999999999999999999999987654433
Q ss_pred C-ccccccccccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhc----c
Q 045493 935 N-WSELAGTCGYIAPELAY-----TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLI----D 1004 (1048)
Q Consensus 935 ~-~~~~~gt~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~ 1004 (1048)
. ....+||+.|+|||++. ...++.++||||+||++|||++|+.||...+. ......+. .
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~-----------~~~~~~i~~~~~~ 299 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-----------VETYGKIMNHKER 299 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHTHHHH
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh-----------hHHHHhhhhcccc
Confidence 2 23468999999999987 45689999999999999999999999864221 11111111 1
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 045493 1005 SRLPPPLGEVEEKLKSMIAVAFLCLDANPDC--RPTMQKVCN 1044 (1048)
Q Consensus 1005 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~ 1044 (1048)
..++... ......+.+++.+|++.+|++ ||+++|+++
T Consensus 300 ~~~p~~~---~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 300 FQFPTQV---TDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CCCCSSC---CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ccCCccc---ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1222211 112345788899999998888 999999976
No 121
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.2e-37 Score=338.95 Aligned_cols=247 Identities=19% Similarity=0.259 Sum_probs=196.0
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|.+. +++.||+|++....... ......+++..++.++||||+++++++...+..++||||+++
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 89 (284)
T 3kk8_A 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89 (284)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence 3456899999999999886 57889999986543322 112334566777889999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc---eEEeccccccccCCCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK---AHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~---~kl~DfG~a~~~~~~~~ 934 (1048)
|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.+...... .
T Consensus 90 ~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~-~ 162 (284)
T 3kk8_A 90 GELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-E 162 (284)
T ss_dssp CBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS-C
T ss_pred CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC-c
Confidence 9999988654 3488999999999999999999999 9999999999999987655 999999999866533 3
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+.......+....
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----------~~~~~~~~~~~~~~~~~~~~ 231 (284)
T 3kk8_A 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----------QHRLYAQIKAGAYDYPSPEW 231 (284)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHTCCCCCTTTT
T ss_pred cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc-----------hhHHHHHHHhccccCCchhh
Confidence 3345679999999999999999999999999999999999999985322 11222222222222222122
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
......+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 232 DTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 233456889999999999999999999986
No 122
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.5e-37 Score=345.46 Aligned_cols=253 Identities=23% Similarity=0.344 Sum_probs=198.3
Q ss_pred ceeeecccccccEEEEEE------cCCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAEL------TSGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVY 852 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 852 (1048)
....||+|+||.||+|++ .+++.||+|++.............+++..++++ +||||+++++++...+..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 445689999999999985 245789999987544332233445666777888 8999999999999999999999
Q ss_pred EccCCCCHHHHHhcccc---------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc
Q 045493 853 EYLERGSLATILSNEAT---------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK 917 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~ 917 (1048)
||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 183 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 183 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETTTE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcCCCC
Confidence 99999999999975432 12489999999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCccccc
Q 045493 918 AHVSDFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAAN 994 (1048)
Q Consensus 918 ~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 994 (1048)
+||+|||+++........ .....+|+.|+|||++.+..++.++||||+||++|||++ |+.||..... ...
T Consensus 184 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~~ 256 (313)
T 1t46_A 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-------DSK 256 (313)
T ss_dssp EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS-------SHH
T ss_pred EEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc-------hhH
Confidence 999999999876544332 233457889999999999999999999999999999999 9999763221 000
Q ss_pred chhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 995 MNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
.............+ ......+.+++.+||+.||++|||++|++++|++
T Consensus 257 ~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 257 FYKMIKEGFRMLSP------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp HHHHHHHTCCCCCC------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHhccCCCCCCc------ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 11111111111111 1223468889999999999999999999999874
No 123
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1e-37 Score=340.82 Aligned_cols=248 Identities=21% Similarity=0.292 Sum_probs=183.3
Q ss_pred ceeeecccccccEEEEEEcC----CCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELTS----GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|.+.. +..||+|++.............+++..++.++||||+++++++. .+..++||||+
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~ 97 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 97 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecC
Confidence 34568999999999998753 34588888765433332333455666778889999999999985 45689999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 98 ~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (281)
T 1mp8_A 98 TLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172 (281)
T ss_dssp TTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCccccc
Confidence 999999999653 23488999999999999999999999 9999999999999999999999999999876543221
Q ss_pred -ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493 936 -WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus 936 -~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
.....+|+.|+|||++.+..++.++||||+||++|||++ |+.||..... ......+......+..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-----------~~~~~~i~~~~~~~~~-- 239 (281)
T 1mp8_A 173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----------NDVIGRIENGERLPMP-- 239 (281)
T ss_dssp ------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----------GGHHHHHHTTCCCCCC--
T ss_pred ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-----------HHHHHHHHcCCCCCCC--
Confidence 233456789999999998899999999999999999997 9999864321 1112222222211111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
......+.+++.+||+.||++|||+.|+++.|+
T Consensus 240 -~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 240 -PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 122346788999999999999999999999986
No 124
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.1e-37 Score=350.19 Aligned_cols=250 Identities=21% Similarity=0.243 Sum_probs=187.1
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
+.....||+|+||+||+|+.. +++.||+|++...... .....+++..++.++||||+++++++...+..++||||++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS--CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc--cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 334556899999999999987 7888999998654322 2345567777889999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc--eEEeccccccccCCCCC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK--AHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~--~kl~DfG~a~~~~~~~~ 934 (1048)
+|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++..... .
T Consensus 100 ~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-~ 172 (361)
T 3uc3_A 100 GGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-S 172 (361)
T ss_dssp SCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc-C
Confidence 999999996533 489999999999999999999999 9999999999999987765 999999999754322 2
Q ss_pred CccccccccccccccccccCCCCch-hhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEK-CDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~-~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
......||+.|+|||++.+..++.+ +||||+||++|||++|+.||..... ..........+.......+..
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~- 244 (361)
T 3uc3_A 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE-------PRDYRKTIQRILSVKYSIPDD- 244 (361)
T ss_dssp --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-----------CCCHHHHHHHHHTTCCCCCTT-
T ss_pred CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc-------HHHHHHHHHHHhcCCCCCCCc-
Confidence 2344579999999999988887655 8999999999999999999864321 111112222222222221110
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
......+.+++.+||+.||++|||+.|+++.
T Consensus 245 -~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 245 -IRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1123467889999999999999999999863
No 125
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.3e-37 Score=347.69 Aligned_cols=253 Identities=20% Similarity=0.270 Sum_probs=183.8
Q ss_pred CcceeeecccccccEEEEEEcCCC----ceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeE----
Q 045493 778 EGKMVLHGTGGCGTVYKAELTSGD----TRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHL---- 848 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~~~~----~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~---- 848 (1048)
+.....||+|+||+||+|++.... .||||++....... ......++++.+++++||||+++++++......
T Consensus 25 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (323)
T 3qup_A 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLP 104 (323)
T ss_dssp CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------
T ss_pred eEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCC
Confidence 344567999999999999876433 68999886543222 223345566677888999999999999876655
Q ss_pred --EEEEEccCCCCHHHHHhcccc---ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecc
Q 045493 849 --FLVYEYLERGSLATILSNEAT---AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDF 923 (1048)
Q Consensus 849 --~lv~e~~~~g~L~~~l~~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~Df 923 (1048)
++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 105 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 105 IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred ccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeec
Confidence 999999999999999965432 22488999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhh
Q 045493 924 GTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVN 1000 (1048)
Q Consensus 924 G~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1000 (1048)
|+++........ .....+|+.|+|||.+.+..++.++||||+||++|||++ |+.||..... .....
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----------~~~~~ 250 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----------AEIYN 250 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----------GGHHH
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-----------HHHHH
Confidence 999876543321 223456789999999999999999999999999999999 8999864221 11222
Q ss_pred hhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1001 DLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.+......... ......+.+++.+||+.||++|||+.|+++.|+
T Consensus 251 ~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 251 YLIGGNRLKQP---PECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp HHHTTCCCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcCCCCCCC---CccCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22222211111 122346889999999999999999999999886
No 126
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.3e-37 Score=359.31 Aligned_cols=242 Identities=25% Similarity=0.354 Sum_probs=193.7
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC-eEEEEEEccCCCC
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ-HLFLVYEYLERGS 859 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~g~ 859 (1048)
...||+|+||.||+|.+. ++.||||+++... ......++++.+++++||||+++++++.+.+ ..|+||||+++|+
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~ 273 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCB
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCc
Confidence 456899999999999986 7899999987543 2234566777889999999999999987655 7999999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcccc
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL 939 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 939 (1048)
|.++++..+ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 274 L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~ 346 (450)
T 1k9a_A 274 LVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---QDTG 346 (450)
T ss_dssp HHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred HHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---ccCC
Confidence 999997543 23368899999999999999999999 9999999999999999999999999999854322 2233
Q ss_pred ccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHH
Q 045493 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKL 1018 (1048)
Q Consensus 940 ~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1048)
.+++.|+|||++.+..++.++|||||||++|||+| |+.||..... ......+..+...+.. ....
T Consensus 347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-----------~~~~~~i~~~~~~~~p---~~~~ 412 (450)
T 1k9a_A 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----------KDVVPRVEKGYKMDAP---DGCP 412 (450)
T ss_dssp CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-----------TTHHHHHHTTCCCCCC---TTCC
T ss_pred CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHcCCCCCCC---CcCC
Confidence 57889999999999999999999999999999999 9999863221 1122222222111111 1234
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1019 KSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1019 ~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
..+.+++.+||+.||++|||+.++++.|+
T Consensus 413 ~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 413 PAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 56888999999999999999999999886
No 127
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.6e-36 Score=354.53 Aligned_cols=347 Identities=25% Similarity=0.383 Sum_probs=279.5
Q ss_pred CCCCCcEEEccCceeecccccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEE
Q 045493 302 NLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFF 381 (1048)
Q Consensus 302 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 381 (1048)
.+++++.|+++++.++. +| .+..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+ ++++++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 35567777777777664 33 36667777777777777765433 7777777777777777775444 7777777777
Q ss_pred EeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccc
Q 045493 382 ALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLT 461 (1048)
Q Consensus 382 ~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~ 461 (1048)
++++|.+++..+ +..+++|+.|++++|++++. ..+..+++|++|+++ |.+.+.. .+..+++|++|++++|.++
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC--GGGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCCC--hhhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC
Confidence 777777775433 77777777777777777653 246777888888886 4555433 3888899999999999988
Q ss_pred cCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCcccc
Q 045493 462 GNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLG 541 (1048)
Q Consensus 462 ~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 541 (1048)
++. .+..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|++++..+ +.
T Consensus 191 ~~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~ 262 (466)
T 1o6v_A 191 DIS--VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LS 262 (466)
T ss_dssp CCG--GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred CCh--hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hh
Confidence 764 47888999999999999987655 67789999999999999854 468889999999999999986654 88
Q ss_pred CCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeE
Q 045493 542 KLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKL 621 (1048)
Q Consensus 542 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 621 (1048)
.+++|++|++++|.+++..+ +..+++|++|++++|+++++.+ +..+++|+.|++++|++++..+ +..+++|++|
T Consensus 263 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 89999999999999996544 8899999999999999998755 8889999999999999998766 7899999999
Q ss_pred ECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCC
Q 045493 622 DLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGS 679 (1048)
Q Consensus 622 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~ 679 (1048)
++++|++++. ..+..+++|++|++++|++++..| +..++.|+.|++++|+|++.
T Consensus 337 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 337 FFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred ECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 9999999865 578899999999999999998887 88999999999999999984
No 128
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=357.15 Aligned_cols=257 Identities=21% Similarity=0.277 Sum_probs=201.2
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC--eEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ--HLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~ 856 (1048)
....||+|+||+||+|++. +++.||||++.............+++..++.++||||+++++++.+.+ ..++||||++
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 3456899999999999887 588999999875443333334456777788999999999999997654 7899999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE----CCCCceEEeccccccccCCC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL----DLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll----~~~~~~kl~DfG~a~~~~~~ 932 (1048)
+|+|.++++.......+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 ~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp TEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 999999997655555589999999999999999999999 99999999999999 77788999999999876543
Q ss_pred CCCcccccccccccccccccc--------CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhh--
Q 045493 933 SSNWSELAGTCGYIAPELAYT--------MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDL-- 1002 (1048)
Q Consensus 933 ~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 1002 (1048)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........+
T Consensus 170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-------~~~~~~~~~~~ 241 (396)
T 4eut_A 170 -EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-------RNKEVMYKIIT 241 (396)
T ss_dssp -GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT-------TCHHHHHHHHH
T ss_pred -CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc-------chHHHHHHHhc
Confidence 22345679999999999865 567889999999999999999999986322100 000111111
Q ss_pred -------------------ccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1003 -------------------IDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1003 -------------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
+....+............+.+++.+||+.||++|||++|+++.++
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 111222222223556677889999999999999999999988764
No 129
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=345.28 Aligned_cols=238 Identities=21% Similarity=0.332 Sum_probs=194.5
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-------ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-------IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-------~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv 851 (1048)
....||+|+||+||+|++. +++.||||++....... .......++..++.++||||+++++++.+.+..++|
T Consensus 28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv 107 (335)
T 3dls_A 28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLV 107 (335)
T ss_dssp EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEE
Confidence 4456899999999999875 67889999987653221 122345678888999999999999999999999999
Q ss_pred EEccCCC-CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccC
Q 045493 852 YEYLERG-SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK 930 (1048)
Q Consensus 852 ~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~ 930 (1048)
|||+.+| +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 108 ~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 181 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181 (335)
T ss_dssp EECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceECC
Confidence 9999777 9999997543 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCC
Q 045493 931 PDSSNWSELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPP 1009 (1048)
Q Consensus 931 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1048)
.. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .......
T Consensus 182 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------------~~~~~~~ 243 (335)
T 3dls_A 182 RG-KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----------------VEAAIHP 243 (335)
T ss_dssp TT-CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------TTTCCCC
T ss_pred CC-CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------HhhccCC
Confidence 43 33345679999999999988876 88999999999999999999998642211 1111111
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1010 PLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1010 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
+. .....+.+++.+||+.||++|||++|+++.
T Consensus 244 ~~----~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 244 PY----LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp SS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred Cc----ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 122457889999999999999999999874
No 130
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1e-37 Score=344.85 Aligned_cols=261 Identities=21% Similarity=0.340 Sum_probs=198.2
Q ss_pred cceeeecccccccEEEEEE-----cCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeC--CeEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAEL-----TSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHT--QHLFLV 851 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~--~~~~lv 851 (1048)
.....||+|+||.||+|++ .+++.||+|++.............+++..++.++||||+++++++.+. ...++|
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 103 (302)
T 4e5w_A 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 103 (302)
T ss_dssp EEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEE
T ss_pred hhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEE
Confidence 4456789999999999984 367889999987654433334456677778899999999999999876 678999
Q ss_pred EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCC
Q 045493 852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKP 931 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 931 (1048)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 104 MEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp EECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 99999999999996432 3488999999999999999999999 999999999999999999999999999987765
Q ss_pred CCC---CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccc----cCCCcccccchhhhhhhcc
Q 045493 932 DSS---NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLL----LSLPAPAANMNIVVNDLID 1004 (1048)
Q Consensus 932 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~ 1004 (1048)
... ......||..|+|||++.+..++.++||||+|+++|||++|+.|+...... ................+..
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (302)
T 4e5w_A 179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE 258 (302)
T ss_dssp TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHT
T ss_pred CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhc
Confidence 432 223456888999999999989999999999999999999999986432110 0000111111111222222
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1005 SRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1005 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
....+.. ......+.+++.+||+.||++|||++|+++.|+
T Consensus 259 ~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 259 GKRLPCP---PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp TCCCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCCCC---CCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 2211111 123356889999999999999999999999986
No 131
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.7e-37 Score=348.06 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=196.1
Q ss_pred ceeeecccccccEEEEEEc--------CCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT--------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFL 850 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~l 850 (1048)
....||+|+||.||+|++. +++.||+|++..............++..++.+ +||||+++++++...+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 3456899999999999874 45679999987543322223344566667777 89999999999999999999
Q ss_pred EEEccCCCCHHHHHhcccc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc
Q 045493 851 VYEYLERGSLATILSNEAT-------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK 917 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~ 917 (1048)
||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 195 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcCCCC
Confidence 9999999999999975432 23488999999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCccccc
Q 045493 918 AHVSDFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAAN 994 (1048)
Q Consensus 918 ~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 994 (1048)
+||+|||+++........ .....+|+.|+|||++.+..++.++||||+||++|||++ |+.||.....
T Consensus 196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---------- 265 (334)
T 2pvf_A 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV---------- 265 (334)
T ss_dssp EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH----------
T ss_pred EEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH----------
Confidence 999999999876543221 233457889999999998889999999999999999999 9999763221
Q ss_pred chhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 995 MNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
......+......... ......+.+++.+||+.||++|||++|+++.|++
T Consensus 266 -~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 315 (334)
T 2pvf_A 266 -EELFKLLKEGHRMDKP---ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315 (334)
T ss_dssp -HHHHHHHHHTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -HHHHHHHhcCCCCCCC---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1111122111111111 1223468889999999999999999999999863
No 132
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=364.04 Aligned_cols=346 Identities=17% Similarity=0.185 Sum_probs=222.2
Q ss_pred ceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeecccc
Q 045493 331 RGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFEN 410 (1048)
Q Consensus 331 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N 410 (1048)
+.++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|+.|++++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 45666677666 4555443 46777777777777666677777777777777777777655666666666655555555
Q ss_pred ccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccc
Q 045493 411 QFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISS 490 (1048)
Q Consensus 411 ~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~ 490 (1048)
++++. .+..|.++++|++|+|++|+++++.+..|..+++|+.|++++|.+.+..+.
T Consensus 91 ~l~~~------------------------~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 146 (477)
T 2id5_A 91 RLKLI------------------------PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR 146 (477)
T ss_dssp CCCSC------------------------CTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT
T ss_pred cCCcc------------------------CcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh
Confidence 55543 344455555555555555555555555555555666666666665555555
Q ss_pred cccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCcccccccccc
Q 045493 491 NWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAEL 570 (1048)
Q Consensus 491 ~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 570 (1048)
.|..+++|++|++++|.+++..+..|..+++|+.|+|++|.+.+..+..|..+++|++|++++|.+.+.+|.......+|
T Consensus 147 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 147 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL 226 (477)
T ss_dssp SSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCC
T ss_pred hccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccc
Confidence 56666666666666666665555556666666666666666665555566666666666666666555555555555567
Q ss_pred ceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCC
Q 045493 571 GYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQN 650 (1048)
Q Consensus 571 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 650 (1048)
++|+|++|+|+.+++..|..+++|+.|+|++|+|+++.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 77777777777665566667777777777777777666666777777777777777777777777777777777777777
Q ss_pred cccCCccccccccCCccEEEeccceecCCCCCcccccccccccccCCccccCC
Q 045493 651 KLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQNATIEAFQGNKELCGD 703 (1048)
Q Consensus 651 ~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 703 (1048)
+|++..+..|..+++|++|++++|+|.+.++..-.+.......+.++...|..
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~ 359 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCAT 359 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEE
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCC
Confidence 77777777777777777777777777776553221121122234555555543
No 133
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.3e-37 Score=355.85 Aligned_cols=363 Identities=18% Similarity=0.190 Sum_probs=193.7
Q ss_pred ccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccccceecccccCcC
Q 045493 36 LFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNRLNGSIPAS 115 (1048)
Q Consensus 36 l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 115 (1048)
+....+..++.+++|++|+|++|.+++. | +|+.+++|++|+|++|+++++ | +..+++|++|++++|++++. |
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--
Confidence 3334445566666666666666666643 4 566666666666666666653 2 56666666666666666643 2
Q ss_pred cCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCCcceeeccccCc
Q 045493 116 LGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRI 195 (1048)
Q Consensus 116 ~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i 195 (1048)
++++++|++|++++|++++ +| +..+++|+.|++++|.+++. .+..+++|++|++++|+.
T Consensus 102 ~~~l~~L~~L~L~~N~l~~----------------l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~ 160 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK----------------LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKK 160 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC----------------CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSC
T ss_pred cCCCCcCCEEECCCCcCCe----------------ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCc
Confidence 6666666666666666542 11 34445555555555555543 255555666666666643
Q ss_pred cccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeecccccccCCCchhh
Q 045493 196 VGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSF 275 (1048)
Q Consensus 196 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 275 (1048)
.+.+ .+..+++|++|++++|++++ +| ++.+++|+.|++++|.+++. .++.+++|++|++++|++++
T Consensus 161 ~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~------ 226 (457)
T 3bz5_A 161 ITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE------ 226 (457)
T ss_dssp CCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC------
T ss_pred cccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc------
Confidence 3233 35555666666666666553 33 55555666666666666542 25555556666666555543
Q ss_pred hccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccccccccccceeeeccccccCCCCcchhccCCCC
Q 045493 276 GNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLS 355 (1048)
Q Consensus 276 ~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 355 (1048)
+| ++.+++|+.|++++|++++.. ++.+++|+.|++++| +|+
T Consensus 227 --------------------ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~ 267 (457)
T 3bz5_A 227 --------------------ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLL 267 (457)
T ss_dssp --------------------CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCS
T ss_pred --------------------cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCC
Confidence 12 334455555555556555432 334455555555443 344
Q ss_pred eEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeeccc
Q 045493 356 QLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNN 435 (1048)
Q Consensus 356 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~ 435 (1048)
.|++++|.+.+.+| ++++++|+.|++++|...+.+|. ....|+.+++++| ++|++|++++|+
T Consensus 268 ~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~ 329 (457)
T 3bz5_A 268 EIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTE 329 (457)
T ss_dssp CCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCC
T ss_pred EEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCc
Confidence 55666666555544 34556666666666665554443 2233333333222 345555555555
Q ss_pred ccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCc
Q 045493 436 FVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPS 514 (1048)
Q Consensus 436 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~ 514 (1048)
+++. .+..+++|+.|++++|+++++ +.|..|++++|.+.+. ..+..|+.+++++|.++|.+|.
T Consensus 330 l~~l---~l~~l~~L~~L~l~~N~l~~l--------~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 330 LTEL---DVSHNTKLKSLSCVNAHIQDF--------SSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp CSCC---CCTTCTTCSEEECCSSCCCBC--------TTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCT
T ss_pred cccc---ccccCCcCcEEECCCCCCCCc--------cccccccccCCcEEec-----ceeeecCccccccCcEEEEcCh
Confidence 5553 155555555555555555531 3444555555555443 1223344445555555554444
No 134
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=9.1e-38 Score=354.53 Aligned_cols=258 Identities=16% Similarity=0.190 Sum_probs=187.9
Q ss_pred cceeeecccccccEEEEEEcC------CCceeeEEeccCCCCccc----------chhhHHHHHHhhcccCceeeEeeEe
Q 045493 779 GKMVLHGTGGCGTVYKAELTS------GDTRAVKKLHSLPTGEIG----------INQKGFVSEITEIRHRNIVKFYGFC 842 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~----------~~~~~~~~~l~~l~h~niv~~~~~~ 842 (1048)
.....||+|+||+||+|.+.. ++.||||++......... .....+...+..++||||+++++++
T Consensus 38 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~ 117 (364)
T 3op5_A 38 KVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSG 117 (364)
T ss_dssp EEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEE
T ss_pred EEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeee
Confidence 345568999999999998865 367899987653211000 0001122234567899999999998
Q ss_pred eeC----CeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC--CCC
Q 045493 843 SHT----QHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD--LEY 916 (1048)
Q Consensus 843 ~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~--~~~ 916 (1048)
... ...|+||||+ +|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++ .++
T Consensus 118 ~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 118 LHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTT
T ss_pred eeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCC
Confidence 764 4589999999 99999999753 24589999999999999999999999 999999999999999 889
Q ss_pred ceEEeccccccccCCCCCC-------ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCC
Q 045493 917 KAHVSDFGTAKFLKPDSSN-------WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLP 989 (1048)
Q Consensus 917 ~~kl~DfG~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 989 (1048)
.+||+|||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..........
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 9999999999876533211 134559999999999999999999999999999999999999987422110000
Q ss_pred c-ccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 990 A-PAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 990 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
. ...........+.++.++. .....++.+++..||+.||++||++++++++|+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCFPA-----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHSCT-----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHhhhhHHHHHHHhccc-----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 0 0000000011111111100 111346888999999999999999999999886
No 135
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-37 Score=359.80 Aligned_cols=243 Identities=22% Similarity=0.355 Sum_probs=197.6
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCC--cccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG--EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|++. +++.||||++...... +......+++..++.++||||+++++++...+..|+||||++
T Consensus 20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 3456899999999999986 7899999998653211 112234566777888999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 100 gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~-~~~ 172 (476)
T 2y94_A 100 GGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-EFL 172 (476)
T ss_dssp SEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT-CCB
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc-ccc
Confidence 99999999653 3489999999999999999999999 9999999999999999999999999999876543 334
Q ss_pred cccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 937 SELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
...+||+.|+|||++.+..+ +.++||||+||++|||++|+.||+... .......+.++....+.
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----------~~~~~~~i~~~~~~~p~---- 237 (476)
T 2y94_A 173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-----------VPTLFKKICDGIFYTPQ---- 237 (476)
T ss_dssp CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----------SHHHHHHHHTTCCCCCT----
T ss_pred cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-----------HHHHHHHHhcCCcCCCc----
Confidence 55689999999999988776 789999999999999999999986322 12223333333322221
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....+.+++.+||+.||++|||++|+++
T Consensus 238 ~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 238 YLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 12345788999999999999999999986
No 136
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=363.23 Aligned_cols=320 Identities=21% Similarity=0.206 Sum_probs=211.6
Q ss_pred EEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCC
Q 045493 3 SINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVN 82 (1048)
Q Consensus 3 ~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n 82 (1048)
.+++++. .++++|...++++++|||++|+|++..+..|+.+++|++|+|++|.++++.|.+|+.+++|++|+|++|
T Consensus 15 ~v~c~~~----~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRK----RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSC----CCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCC----CcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 3555554 456778778889999999999999888889999999999999999999888889999999999999999
Q ss_pred cCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCc
Q 045493 83 QLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPV 162 (1048)
Q Consensus 83 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~ 162 (1048)
+++++.+..|.++++|++|++++|+++...|..|..+++|++|++++|++.+
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------------- 142 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY---------------------------- 142 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCE----------------------------
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccce----------------------------
Confidence 9998777778888999999999999888888888888888888888887753
Q ss_pred EEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCc
Q 045493 163 SVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNR 242 (1048)
Q Consensus 163 ~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 242 (1048)
..+..|.++++|+.|+|++|++++..+..|..+++|++|+|++|.+.+..+..|..+++|++|++++|.
T Consensus 143 -----------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 143 -----------ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp -----------ECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT
T ss_pred -----------eChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc
Confidence 334455566666666666666665555556666666666666666665555566666666666666666
Q ss_pred cCCCCCcccccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeeccccc
Q 045493 243 LSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPP 322 (1048)
Q Consensus 243 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 322 (1048)
..+.+|..+....+|++|++++|+++...+..|..+ ++|+.|+|++|.+++..+.
T Consensus 212 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l-------------------------~~L~~L~Ls~n~l~~~~~~ 266 (477)
T 2id5_A 212 YLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL-------------------------VYLRFLNLSYNPISTIEGS 266 (477)
T ss_dssp TCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTC-------------------------TTCCEEECCSSCCCEECTT
T ss_pred cccccCcccccCccccEEECcCCcccccCHHHhcCc-------------------------cccCeeECCCCcCCccChh
Confidence 555555555555566666666666654333333333 3344444444444433334
Q ss_pred ccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccC
Q 045493 323 SLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSG 390 (1048)
Q Consensus 323 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 390 (1048)
.|..+++|+.|++++|.+.+..|..|..+++|++|+|++|++++..+..|.++++|+.|+|++|++.+
T Consensus 267 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 267 MLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp SCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred hccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 44444444444444444444444444444455555555555544444444445555555555555543
No 137
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=343.72 Aligned_cols=246 Identities=25% Similarity=0.411 Sum_probs=186.8
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCCH
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSL 860 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 860 (1048)
...||+|+||+||+|++. ++.||+|++.... .......+++.+++++||||+++++++.+ ..++||||+++|+|
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L 86 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSL 86 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSSTT---HHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecChh---HHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCH
Confidence 456899999999999886 7889999985422 12234556777788999999999999874 47999999999999
Q ss_pred HHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc-eEEeccccccccCCCCCCcccc
Q 045493 861 ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK-AHVSDFGTAKFLKPDSSNWSEL 939 (1048)
Q Consensus 861 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~-~kl~DfG~a~~~~~~~~~~~~~ 939 (1048)
.++++.......+++..+..++.|+++||+|||+....+|+||||||+||+++.++. +||+|||+++..... ....
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---~~~~ 163 (307)
T 2eva_A 87 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNN 163 (307)
T ss_dssp HHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------------
T ss_pred HHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---cccC
Confidence 999986655556788999999999999999999932128999999999999998886 799999999765432 2334
Q ss_pred ccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHHH
Q 045493 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKLK 1019 (1048)
Q Consensus 940 ~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1019 (1048)
.||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..............+... .....
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~~---~~~~~ 231 (307)
T 2eva_A 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG---------PAFRIMWAVHNGTRPPLI---KNLPK 231 (307)
T ss_dssp -CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS---------SHHHHHHHHHTTCCCCCB---TTCCH
T ss_pred CCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc---------cHHHHHHHHhcCCCCCcc---cccCH
Confidence 689999999999999999999999999999999999999863221 001111111122222111 12234
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1020 SMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1020 ~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.+.+++.+||+.||++|||++|++++|+
T Consensus 232 ~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 232 PIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 5788999999999999999999999886
No 138
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.2e-37 Score=344.71 Aligned_cols=257 Identities=18% Similarity=0.258 Sum_probs=190.9
Q ss_pred eeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhh-cccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 782 VLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITE-IRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
..||+|+||+||+|... +++.||||++....... .....++++.+.+ .+||||+++++++.+.+..|+||||+++|+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI-RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCC-HHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchh-HHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 35899999999999875 68899999986543222 2233445555666 479999999999999999999999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc---eEEeccccccccCCCCC--
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK---AHVSDFGTAKFLKPDSS-- 934 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~---~kl~DfG~a~~~~~~~~-- 934 (1048)
|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++........
T Consensus 98 L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (316)
T 2ac3_A 98 ILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171 (316)
T ss_dssp HHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred HHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence 999997543 488999999999999999999999 9999999999999998776 99999999986542211
Q ss_pred -----Ccccccccccccccccccc-----CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccc----cchhhhh
Q 045493 935 -----NWSELAGTCGYIAPELAYT-----MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAA----NMNIVVN 1000 (1048)
Q Consensus 935 -----~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~ 1000 (1048)
.....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.............. .......
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (316)
T 2ac3_A 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251 (316)
T ss_dssp ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH
T ss_pred cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH
Confidence 1234569999999999875 4578999999999999999999999875432111100000 0111223
Q ss_pred hhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1001 DLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
.+.......+..........+.+++.+||+.||++|||++|+++.
T Consensus 252 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 252 SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 333333333322222344578899999999999999999999873
No 139
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.1e-37 Score=336.58 Aligned_cols=248 Identities=26% Similarity=0.393 Sum_probs=192.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCccc------chhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIG------INQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVY 852 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~------~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 852 (1048)
....||+|+||+||+|++. +++.||+|++......... ....+++..++.++||||+++++++.+.. ++||
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~ 100 (287)
T 4f0f_A 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVM 100 (287)
T ss_dssp EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEE
T ss_pred ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEE
Confidence 3456899999999999885 6888999998654332211 23455667778889999999999997665 7999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeeCCCCCCeEECCCCc-----eEEecccc
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP--ILHRDISSKKVLLDLEYK-----AHVSDFGT 925 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dik~~NIll~~~~~-----~kl~DfG~ 925 (1048)
||+++|+|.+++... ...+++..+..++.|++.|++|||+. + |+||||||+||+++.++. +||+|||+
T Consensus 101 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp ECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred EecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 999999999988653 33589999999999999999999998 7 999999999999988876 99999999
Q ss_pred ccccCCCCCCccccccccccccccccc--cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhc
Q 045493 926 AKFLKPDSSNWSELAGTCGYIAPELAY--TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLI 1003 (1048)
Q Consensus 926 a~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1048)
++.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||..... ..........
T Consensus 176 ~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~---------~~~~~~~~~~ 243 (287)
T 4f0f_A 176 SQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY---------GKIKFINMIR 243 (287)
T ss_dssp CBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC---------CHHHHHHHHH
T ss_pred cccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc---------cHHHHHHHHh
Confidence 975432 344567999999999984 44578999999999999999999999863221 0011111111
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1004 DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1004 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
.....+.. .......+.+++.+||+.||++|||++|+++.|++
T Consensus 244 ~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 244 EEGLRPTI--PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HSCCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ccCCCCCC--CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 11111111 11233568899999999999999999999999975
No 140
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.3e-37 Score=349.17 Aligned_cols=252 Identities=24% Similarity=0.379 Sum_probs=196.1
Q ss_pred ceeeecccccccEEEEEEcC-C-----CceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELTS-G-----DTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVY 852 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~-~-----~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 852 (1048)
....||+|+||.||+|.+.. + ..||+|.+..............++..++.+ +||||+++++++.+.+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 34568999999999998753 2 368899887654333333445667777888 8999999999999999999999
Q ss_pred EccCCCCHHHHHhcccc-----------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEe
Q 045493 853 EYLERGSLATILSNEAT-----------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVS 921 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~ 921 (1048)
||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 206 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIG 206 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEEEBC
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeEEEC
Confidence 99999999999975421 23478999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhh
Q 045493 922 DFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIV 998 (1048)
Q Consensus 922 DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 998 (1048)
|||+++........ .....+|+.|+|||++.+..++.++||||+||++|||+| |+.||..... .......
T Consensus 207 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-------~~~~~~~ 279 (333)
T 2i1m_A 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV-------NSKFYKL 279 (333)
T ss_dssp CCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS-------SHHHHHH
T ss_pred ccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch-------hHHHHHH
Confidence 99999876543322 233457889999999999999999999999999999999 8999763221 0001111
Q ss_pred hhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 999 VNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.........+. .....+.+++.+||+.||++|||++|++++|+
T Consensus 280 ~~~~~~~~~~~------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 280 VKDGYQMAQPA------FAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp HHHTCCCCCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HhcCCCCCCCC------CCCHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 11111111111 12346788999999999999999999999986
No 141
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-37 Score=345.96 Aligned_cols=263 Identities=23% Similarity=0.342 Sum_probs=190.0
Q ss_pred cceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeC----CeEEEEEEc
Q 045493 779 GKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHT----QHLFLVYEY 854 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~----~~~~lv~e~ 854 (1048)
.....||+|+||.||+|++. ++.||||++...... ....+.++.....++||||+++++++... ...++||||
T Consensus 40 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~--~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 116 (337)
T 3mdy_A 40 QMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEA--SWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDY 116 (337)
T ss_dssp EEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECC
T ss_pred EEEeEeecCCCeEEEEEEEC-CceEEEEEEeccccc--hhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEec
Confidence 34557899999999999887 899999998543211 11112222222345899999999999876 789999999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEeeCCCCCCeEECCCCceEEecccccccc
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC-----FPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL 929 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 929 (1048)
+++|+|.++++.. .+++..+..++.|++.||+|||+.. .++|+||||||+||+++.++.+||+|||+++.+
T Consensus 117 ~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 117 HENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp CTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred cCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence 9999999999643 4889999999999999999999762 238999999999999999999999999999876
Q ss_pred CCCCCC----ccccccccccccccccccCCCCch------hhHHHHHHHHHHHHhCCCCCccccccc----CCCcccccc
Q 045493 930 KPDSSN----WSELAGTCGYIAPELAYTMRANEK------CDVFNFGVLVLEVIEGKHPGHFLSLLL----SLPAPAANM 995 (1048)
Q Consensus 930 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~------~Dvws~Gvvl~elltg~~p~~~~~~~~----~~~~~~~~~ 995 (1048)
...... .....||+.|+|||++.+..++.+ +||||+||++|||++|+.|+....... .........
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~ 272 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY 272 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCch
Confidence 543322 124579999999999987766554 999999999999999955543211110 000011111
Q ss_pred hhhhhhhccCCCCCCch---hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 996 NIVVNDLIDSRLPPPLG---EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 996 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
.............+... ........+.+++.+||+.||++|||++|+++.|++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 273 EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred hhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 11111111111111111 123567789999999999999999999999999863
No 142
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1e-36 Score=354.67 Aligned_cols=360 Identities=20% Similarity=0.239 Sum_probs=195.7
Q ss_pred cCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccc
Q 045493 175 IPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSF 254 (1048)
Q Consensus 175 ~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 254 (1048)
.+..+..+++|++|++++|.+++. | .+..+++|++|+|++|++++ +| ++.+++|++|++++|.+++. + ++.+
T Consensus 34 ~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 34 DTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp SEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred cccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCC
Confidence 334555666666666666666643 3 46666666666666666664 23 56666666666666666643 2 6666
Q ss_pred cccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccccccccccceee
Q 045493 255 KSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLY 334 (1048)
Q Consensus 255 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 334 (1048)
++|++|++++|++++. | ++.+++|++|++++|++++. .++.+++|+.|+
T Consensus 106 ~~L~~L~L~~N~l~~l--------------------------~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~ 154 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTKL--------------------------D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELD 154 (457)
T ss_dssp TTCCEEECCSSCCSCC--------------------------C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEE
T ss_pred CcCCEEECCCCcCCee--------------------------c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEE
Confidence 6666666666665431 1 34455566666666666543 255556666666
Q ss_pred eccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeeccccccCC
Q 045493 335 IRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTG 414 (1048)
Q Consensus 335 l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 414 (1048)
+++|...+.+ .+..+++|++|++++|++++ +| ++.+++|+.|++++|++++. .+..+++|+.|++++|++++
T Consensus 155 l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 155 CHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp CTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC
T ss_pred CCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc
Confidence 6666433333 35556666666666666664 33 55666666666666666643 24455555555555555554
Q ss_pred CCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccC
Q 045493 415 YLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIK 494 (1048)
Q Consensus 415 ~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 494 (1048)
+| +..+++|+.|++++|.+++.. +..+++|+.|+++.| +|+.|++++|.+.+..| +..
T Consensus 227 -ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~ 284 (457)
T 3bz5_A 227 -ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEG 284 (457)
T ss_dssp -CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTT
T ss_pred -cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccc
Confidence 22 444455555555555555432 233444555555443 23455555555544443 344
Q ss_pred CCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceee
Q 045493 495 CPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLD 574 (1048)
Q Consensus 495 ~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 574 (1048)
+++|+.|++++|...+.+|. ..++|+.|++++| ++|++|++++|++++. .++.+++|+.|+
T Consensus 285 l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l---~l~~l~~L~~L~ 345 (457)
T 3bz5_A 285 CRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL---DVSHNTKLKSLS 345 (457)
T ss_dssp CTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC---CCTTCTTCSEEE
T ss_pred cccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc---ccccCCcCcEEE
Confidence 55555555555554444432 2233444433333 4556666666666642 255566666666
Q ss_pred cccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcC
Q 045493 575 LSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSE 635 (1048)
Q Consensus 575 Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 635 (1048)
+++|+|+++ +.|..|++++|.+.+. +.+..|+.+++++|+++|.+|..
T Consensus 346 l~~N~l~~l--------~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 346 CVNAHIQDF--------SSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp CCSSCCCBC--------TTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred CCCCCCCCc--------cccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 666665542 3455555555555543 23444555555555555555443
No 143
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.5e-37 Score=364.32 Aligned_cols=248 Identities=22% Similarity=0.322 Sum_probs=198.3
Q ss_pred eeeecccccccEEEEEEcC-CCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 781 MVLHGTGGCGTVYKAELTS-GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
...||+|+||.||+|.+.. +..||||+++..... .....+++..+++++||||++++++|.+.+..|+||||+++|+
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~ 302 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 302 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc--hHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCC
Confidence 4468999999999999874 788999998654322 2344566777888999999999999999999999999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-Cccc
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS-NWSE 938 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~ 938 (1048)
|.++++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....
T Consensus 303 L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 378 (495)
T 1opk_A 303 LLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378 (495)
T ss_dssp HHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTT
T ss_pred HHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCC
Confidence 999997533 34588999999999999999999999 999999999999999999999999999987653321 1223
Q ss_pred cccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus 939 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
..+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+......... ...
T Consensus 379 ~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~---~~~ 444 (495)
T 1opk_A 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------SQVYELLEKDYRMERP---EGC 444 (495)
T ss_dssp CCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----------GGHHHHHHTTCCCCCC---TTC
T ss_pred CcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHcCCCCCCC---CCC
Confidence 456789999999998899999999999999999999 9999764321 1111111111111111 123
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
...+.+++.+||+.||++|||++|+++.|++
T Consensus 445 ~~~l~~li~~cl~~dP~~RPs~~el~~~L~~ 475 (495)
T 1opk_A 445 PEKVYELMRACWQWNPSDRPSFAEIHQAFET 475 (495)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 3568889999999999999999999999864
No 144
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=353.17 Aligned_cols=261 Identities=24% Similarity=0.320 Sum_probs=189.0
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEee-----eCCeEEEEEEc
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS-----HTQHLFLVYEY 854 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~-----~~~~~~lv~e~ 854 (1048)
....||+|+||+||+|+. +++.||||++...... ....+.++..+..++||||+++++++. ....+++||||
T Consensus 17 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~--~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 17 LLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ--NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeeecccCCCeEEEEEEE-CCeEEEEEEeeccchh--hHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence 345689999999999987 4889999998643211 111223333345679999999998553 23367899999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCC------CCCeEeeCCCCCCeEECCCCceEEeccccccc
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC------FPPILHRDISSKKVLLDLEYKAHVSDFGTAKF 928 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 928 (1048)
+++|+|.++++... .++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 94 YPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp CTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceee
Confidence 99999999996532 478899999999999999999862 23899999999999999999999999999987
Q ss_pred cCCCC--------CCcccccccccccccccccc-------CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCccc-
Q 045493 929 LKPDS--------SNWSELAGTCGYIAPELAYT-------MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPA- 992 (1048)
Q Consensus 929 ~~~~~--------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~- 992 (1048)
+.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~ 249 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ 249 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence 65322 11234579999999999886 456789999999999999999987764322211110000
Q ss_pred ------ccchh----hhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 993 ------ANMNI----VVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 993 ------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
..... .......+.++............+.+++.+||+.||++|||++|+++.|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 250 TEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 00000 01111122233322223345667999999999999999999999999886
No 145
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.3e-37 Score=363.32 Aligned_cols=252 Identities=21% Similarity=0.266 Sum_probs=199.7
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCC--cccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG--EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
.....||+|+||.||+|+.+ +++.||+|++...... ........+.+.++.++||||+++++++...+..|+||||+
T Consensus 188 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~ 267 (543)
T 3c4z_A 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIM 267 (543)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEec
Confidence 34557999999999999986 6889999998653221 11123345667778899999999999999999999999999
Q ss_pred CCCCHHHHHhcccc-ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493 856 ERGSLATILSNEAT-AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+||+|.+++..... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.+|++||+|||+++.+.....
T Consensus 268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 99999999975432 34589999999999999999999999 999999999999999999999999999988765554
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..........+.......+
T Consensus 345 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~-------~~~~~~~~~~i~~~~~~~p---- 413 (543)
T 3c4z_A 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-------KVENKELKQRVLEQAVTYP---- 413 (543)
T ss_dssp CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC-------CCCHHHHHHHHHHCCCCCC----
T ss_pred ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc-------chhHHHHHHHHhhcccCCC----
Confidence 45566899999999999999999999999999999999999999864321 0111222222323222221
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTM-----QKVCN 1044 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~ 1044 (1048)
......+.+++.+||+.||++||++ +++++
T Consensus 414 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 414 DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1223467889999999999999975 56653
No 146
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-37 Score=345.13 Aligned_cols=249 Identities=24% Similarity=0.412 Sum_probs=190.2
Q ss_pred eeeecccccccEEEEEEcCC-----CceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 781 MVLHGTGGCGTVYKAELTSG-----DTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~-----~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
...||+|+||.||+|..... ..||+|++..............++..++.++||||+++++++...+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 45689999999999987632 2489999875433332233455667778889999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 129 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 203 (333)
T 1mqb_A 129 ENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203 (333)
T ss_dssp TTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred CCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcccccc
Confidence 999999999653 23588999999999999999999999 9999999999999999999999999999876543221
Q ss_pred ---ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493 936 ---WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus 936 ---~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
.....+|+.|+|||++.+..++.++||||+||++|||++ |+.||.... .......+......+..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-----------~~~~~~~~~~~~~~~~~ 272 (333)
T 1mqb_A 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-----------NHEVMKAINDGFRLPTP 272 (333)
T ss_dssp -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------HHHHHHHHHTTCCCCCC
T ss_pred ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC-----------HHHHHHHHHCCCcCCCc
Confidence 123346789999999998899999999999999999999 999985322 11222222222211111
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1012 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
......+.+++.+||+.||++||+++|++++|++
T Consensus 273 ---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 306 (333)
T 1mqb_A 273 ---MDCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306 (333)
T ss_dssp ---TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred ---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1233468889999999999999999999998863
No 147
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.8e-37 Score=347.89 Aligned_cols=195 Identities=23% Similarity=0.284 Sum_probs=163.3
Q ss_pred CCcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcc-----cCceeeEeeEeeeCCeEEE
Q 045493 777 FEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-----HRNIVKFYGFCSHTQHLFL 850 (1048)
Q Consensus 777 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-----h~niv~~~~~~~~~~~~~l 850 (1048)
.+.....||+|+||+||+|++. +++.||||++.... ........+...++.++ ||||+++++++...+..++
T Consensus 36 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l 113 (360)
T 3llt_A 36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL 113 (360)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred EEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence 3444567899999999999885 67889999986421 11122334555555554 9999999999999999999
Q ss_pred EEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC----------------
Q 045493 851 VYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL---------------- 914 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~---------------- 914 (1048)
||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 114 v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~ 188 (360)
T 3llt_A 114 IFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188 (360)
T ss_dssp EECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTC
T ss_pred EEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccccc
Confidence 99999 889999997543 23488999999999999999999999 9999999999999975
Q ss_pred ---------CCceEEeccccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcc
Q 045493 915 ---------EYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHF 981 (1048)
Q Consensus 915 ---------~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 981 (1048)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 189 ~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 189 KKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp CEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 789999999999865432 2346789999999999999999999999999999999999999864
No 148
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=6.4e-37 Score=338.62 Aligned_cols=248 Identities=23% Similarity=0.369 Sum_probs=200.5
Q ss_pred CCcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 777 FEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 777 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
.+.....||+|+||.||+|... +++.||+|++.............+++..++.++||||+++++++.+....++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 3445667999999999999875 678899999876544433344566677778889999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.........
T Consensus 103 ~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 103 GGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp TTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 99999999864 3488999999999999999999999 9999999999999999999999999999877655444
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
.....||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+.....+... .
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~---~ 241 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----------KVLFLIPKNNPPTLE---G 241 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----------HHHHHHHHSCCCCCC---S
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----------HHHHHhhcCCCCCCc---c
Confidence 55667999999999999989999999999999999999999998632211 111111111111111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 242 NYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 123458889999999999999999999863
No 149
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-37 Score=337.55 Aligned_cols=246 Identities=23% Similarity=0.344 Sum_probs=189.6
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||+||+|+.. +++.+|+|++.............++++.++.++||||+++++++.+.+..++||||+++|
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 3456899999999999886 678899999876544433344566777888999999999999999999999999999999
Q ss_pred CHHHHHhccc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE---CCCCceEEeccccccccCCCCC
Q 045493 859 SLATILSNEA-TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL---DLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 859 ~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..... .
T Consensus 106 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~-~ 181 (285)
T 3is5_A 106 ELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-E 181 (285)
T ss_dssp BHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred cHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc-c
Confidence 9999986432 234589999999999999999999999 99999999999999 45688999999999876533 2
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhh--ccCCCCCCch
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDL--IDSRLPPPLG 1012 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 1012 (1048)
......||+.|+|||++. ..++.++||||+||++|||++|+.||..... ....... ........
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~-----------~~~~~~~~~~~~~~~~~-- 247 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL-----------EEVQQKATYKEPNYAVE-- 247 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHCCCCCCC---
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH-----------HHHHhhhccCCcccccc--
Confidence 334567999999999876 4689999999999999999999999864221 1111111 11111111
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.......+.+++.+||+.||++|||++|+++
T Consensus 248 -~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 -CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred -cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0112345778999999999999999999986
No 150
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.7e-38 Score=356.70 Aligned_cols=247 Identities=21% Similarity=0.223 Sum_probs=193.9
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY 854 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 854 (1048)
+.....||+|+||.||+|+.+ +++.||+|++.+... ........++...+..++||||+++++++.+.+..|+||||
T Consensus 63 f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~ 142 (412)
T 2vd5_A 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEY 142 (412)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcC
Confidence 344567999999999999986 688999999865321 11122345566677888999999999999999999999999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+++|+|.+++.+.+ ..+++..++.++.||+.||+|||+. +|+||||||+|||++.+|++||+|||+++.......
T Consensus 143 ~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 143 YVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp CCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 99999999997532 3488999999999999999999999 999999999999999999999999999987654433
Q ss_pred C-ccccccccccccccccc-------cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhcc--
Q 045493 935 N-WSELAGTCGYIAPELAY-------TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLID-- 1004 (1048)
Q Consensus 935 ~-~~~~~gt~~y~aPE~~~-------~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1004 (1048)
. ....+||+.|+|||++. ...++.++||||+||++|||++|+.||...+. ......+..
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----------~~~~~~i~~~~ 286 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-----------AETYGKIVHYK 286 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHTHH
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhcc
Confidence 2 23468999999999987 35689999999999999999999999863221 111112211
Q ss_pred --CCCCCCchhHHHHHHHHHHHHHhccCCCCCCC---CCHHHHHH
Q 045493 1005 --SRLPPPLGEVEEKLKSMIAVAFLCLDANPDCR---PTMQKVCN 1044 (1048)
Q Consensus 1005 --~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Pt~~evl~ 1044 (1048)
...+.. ......++.+++.+||+ +|++| |+++|+++
T Consensus 287 ~~~~~p~~---~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 287 EHLSLPLV---DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHCCCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred cCcCCCcc---ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 111110 11234568889999999 99998 69999875
No 151
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5e-38 Score=348.60 Aligned_cols=248 Identities=23% Similarity=0.326 Sum_probs=183.7
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCccc--chhhHHHHHHhhcccCceeeEeeEeeeCC----eEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIG--INQKGFVSEITEIRHRNIVKFYGFCSHTQ----HLFLVY 852 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~--~~~~~~~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 852 (1048)
....||+|+||.||+|++. +++.||+|++......... ....+++..+.+++||||+++++++.... ..|+||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEE
Confidence 4457899999999999874 6788999998764332211 12234444556778999999999986544 349999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
||+++|+|.++++..+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 96 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 96 EYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp ECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred ecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 9999999999997543 488999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC---CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCC
Q 045493 933 SS---NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPP 1009 (1048)
Q Consensus 933 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1048)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .............+
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-----------~~~~~~~~~~~~~~ 238 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-----------VSVAYQHVREDPIP 238 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHHCCCCC
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHhcCCCCC
Confidence 22 22345689999999999999999999999999999999999999863221 11111222222221
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1010 PLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1010 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
+..........+.+++.+||+.||++||++.++++
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 11111223456889999999999999998877664
No 152
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-37 Score=338.01 Aligned_cols=247 Identities=22% Similarity=0.273 Sum_probs=195.5
Q ss_pred eeeecccccccEEEEEEc---CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 781 MVLHGTGGCGTVYKAELT---SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
...||+|+||.||+|.+. ++..||+|++.............++++.++.++||||+++++++ ..+..++||||+++
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred hccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 336899999999999864 56779999987654333333445667777888999999999999 55669999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC--
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN-- 935 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~-- 935 (1048)
|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 94 ~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 94 GPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp EEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 9999999643 34589999999999999999999999 9999999999999999999999999999877543322
Q ss_pred -ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493 936 -WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus 936 -~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
.....+|+.|+|||++.+..++.++||||+||++|||++ |+.||..... ......+.....+...
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----------~~~~~~i~~~~~~~~~-- 235 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----------PEVMAFIEQGKRMECP-- 235 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-----------HHHHHHHHTTCCCCCC--
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----------HHHHHHHhcCCcCCCC--
Confidence 223456889999999998889999999999999999999 9999863221 1111222222111111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
......+.+++.+||+.||++|||+.|+++.|+
T Consensus 236 -~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 236 -PECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp -TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred -CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 123346888999999999999999999999886
No 153
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-37 Score=351.56 Aligned_cols=248 Identities=21% Similarity=0.321 Sum_probs=180.9
Q ss_pred eeeecccccccEEEEEEcCC----CceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEee-eCCeEEEEEEcc
Q 045493 781 MVLHGTGGCGTVYKAELTSG----DTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS-HTQHLFLVYEYL 855 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~ 855 (1048)
...||+|+||+||+|++.+. ..||+|.+.............+++..+++++||||+++++++. ..+..++||||+
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 35689999999999987532 3578888765333222223344555567889999999999875 456789999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS- 934 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~- 934 (1048)
++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 174 ~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 174 KHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp TTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 999999999653 23478899999999999999999999 999999999999999999999999999986643321
Q ss_pred ---CccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCC
Q 045493 935 ---NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP 1010 (1048)
Q Consensus 935 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1048)
......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ......+........
T Consensus 249 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~-----------~~~~~~~~~~~~~~~ 317 (373)
T 3c1x_A 249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ 317 (373)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS-----------SCHHHHHHTTCCCCC
T ss_pred cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH-----------HHHHHHHHcCCCCCC
Confidence 1233457889999999999999999999999999999999 6667653221 111112222221111
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1011 LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1011 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
. ......+.+++.+||+.||++|||++|+++.|+
T Consensus 318 p---~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 318 P---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1 122346888999999999999999999999986
No 154
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.1e-37 Score=356.01 Aligned_cols=249 Identities=21% Similarity=0.289 Sum_probs=186.5
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCC-------CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT-------GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFL 850 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-------~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~l 850 (1048)
.....||+|+||+||+|... +++.||+|++..... ........+++..+++++||||+++++++. .+..|+
T Consensus 138 ~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~l 216 (419)
T 3i6u_A 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYI 216 (419)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEE
T ss_pred EEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEE
Confidence 34556899999999999876 578999999865321 111223456778889999999999999985 455899
Q ss_pred EEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC---ceEEecccccc
Q 045493 851 VYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY---KAHVSDFGTAK 927 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~---~~kl~DfG~a~ 927 (1048)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 217 v~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 217 VLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred EEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecccce
Confidence 99999999999988643 3489999999999999999999999 999999999999997544 59999999998
Q ss_pred ccCCCCCCcccccccccccccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhcc
Q 045493 928 FLKPDSSNWSELAGTCGYIAPELAYT---MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLID 1004 (1048)
Q Consensus 928 ~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1048)
..... ......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .......+..
T Consensus 291 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~----------~~~~~~~i~~ 359 (419)
T 3i6u_A 291 ILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT----------QVSLKDQITS 359 (419)
T ss_dssp SCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS----------SCCHHHHHHT
T ss_pred ecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc----------hHHHHHHHhc
Confidence 76532 33445689999999999863 5678999999999999999999999863211 1111122222
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1005 SRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1005 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
................+.+++.+||+.||++|||++|+++.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 33332222223345678899999999999999999999873
No 155
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.7e-36 Score=352.37 Aligned_cols=346 Identities=26% Similarity=0.365 Sum_probs=202.6
Q ss_pred CCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCccccccccccee
Q 045493 181 GLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYL 260 (1048)
Q Consensus 181 ~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 260 (1048)
.+++|+.|+++++.+.. +| .+..+++|++|+|++|.+.+. |+ +.++++|++|++++|.+++..+ ++.+++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 35677777777777763 44 366777777777777777643 33 6777777777777777774433 7777777777
Q ss_pred ecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccccccccccceeeeccccc
Q 045493 261 YLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENML 340 (1048)
Q Consensus 261 ~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 340 (1048)
++++|.+.+..+ +..+++|++|++++|.+++. + .++.+++|+.|+++ |.+
T Consensus 118 ~L~~n~l~~~~~---------------------------~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~ 167 (466)
T 1o6v_A 118 TLFNNQITDIDP---------------------------LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQV 167 (466)
T ss_dssp ECCSSCCCCCGG---------------------------GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESC
T ss_pred ECCCCCCCCChH---------------------------HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-Ccc
Confidence 777776653211 44556677777777776643 2 36667777777775 334
Q ss_pred cCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeeccccccCCCCCccc
Q 045493 341 YGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNV 420 (1048)
Q Consensus 341 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~ 420 (1048)
.+. ..+..+++|++|++++|.+++. ..+..+++|+.|++++|.+.+..| ++.+++|+.|++++|++++. ..+
T Consensus 168 ~~~--~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l 239 (466)
T 1o6v_A 168 TDL--KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTL 239 (466)
T ss_dssp CCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGG
T ss_pred cCc--hhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhh
Confidence 322 2366777777777777777643 246677777777777777765544 55566666666666666543 234
Q ss_pred ccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccE
Q 045493 421 CQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLAT 500 (1048)
Q Consensus 421 ~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~ 500 (1048)
..+++|++|++++|.+.+..+ +..+++|++|++++|.++++++ +..+++|+.|++++|++++..+ +..+++|++
T Consensus 240 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 313 (466)
T 1o6v_A 240 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTY 313 (466)
T ss_dssp GGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSE
T ss_pred hcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCE
Confidence 445555555555555554433 5555555555555555554443 4455555555555555554332 445555555
Q ss_pred EEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcc
Q 045493 501 LNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRL 580 (1048)
Q Consensus 501 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 580 (1048)
|++++|.+++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|++|++++|++
T Consensus 314 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 314 LTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 387 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEE
T ss_pred EECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcc
Confidence 5555555554433 44555555555555555533 244555555555555555554433 45555555555555555
Q ss_pred cc
Q 045493 581 SK 582 (1048)
Q Consensus 581 ~~ 582 (1048)
++
T Consensus 388 ~~ 389 (466)
T 1o6v_A 388 TN 389 (466)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 156
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=7.5e-37 Score=338.86 Aligned_cols=261 Identities=23% Similarity=0.308 Sum_probs=191.1
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCC----cccchhhHHHHHHhhc---ccCceeeEeeEeeeCC----
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG----EIGINQKGFVSEITEI---RHRNIVKFYGFCSHTQ---- 846 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~----~~~~~~~~~~~~l~~l---~h~niv~~~~~~~~~~---- 846 (1048)
.....||+|+||+||+|++. +++.||+|++...... .......+++..++.+ +||||+++++++....
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~ 91 (308)
T 3g33_A 12 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDRE 91 (308)
T ss_dssp EEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSE
T ss_pred EEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCc
Confidence 34556899999999999875 6888999998653321 1112333444444444 5999999999997654
Q ss_pred -eEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccc
Q 045493 847 -HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGT 925 (1048)
Q Consensus 847 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~ 925 (1048)
..++||||+. |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 92 IKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred eeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 5899999997 599999975432 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCccccc-c
Q 045493 926 AKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAAN-M 995 (1048)
Q Consensus 926 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~-~ 995 (1048)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..+....+ .
T Consensus 167 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (308)
T 3g33_A 167 ARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 245 (308)
T ss_dssp TTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCS
T ss_pred ccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 9876433 33455689999999999999999999999999999999999999986432210 00000000 0
Q ss_pred hh-hhhhhccCCCCCCch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 996 NI-VVNDLIDSRLPPPLG-EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 996 ~~-~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
.. ..........+.... ...+....+.+++.+||+.||++|||++|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 246 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00 000000111111100 011233568899999999999999999999863
No 157
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.1e-37 Score=344.64 Aligned_cols=259 Identities=21% Similarity=0.332 Sum_probs=198.2
Q ss_pred cceeeecccccccEEEEEEc-----CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee--CCeEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-----SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH--TQHLFLV 851 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~--~~~~~lv 851 (1048)
.....||+|+||+||++.+. +++.||||++.............++++.++.++||||+++++++.+ ....++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 44567999999999988653 5778999999765433333344567777888999999999999987 4678999
Q ss_pred EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCC
Q 045493 852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKP 931 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 931 (1048)
|||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 114 ~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp ECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 9999999999999653 388999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCC---ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccc----cCCCcccccchhhhhhhcc
Q 045493 932 DSSN---WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLL----LSLPAPAANMNIVVNDLID 1004 (1048)
Q Consensus 932 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~ 1004 (1048)
.... .....+|+.|+|||++.+..++.++||||+||++|||++|+.||.....- ......... .....+...
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 265 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT-VLRLTELLE 265 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHH-HHHHHHHHH
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchh-HHHHHHHHh
Confidence 4321 23456788999999999988999999999999999999999998643210 001100000 111111112
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1005 SRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1005 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
....... .......+.+++.+||+.||++|||++|+++.|+
T Consensus 266 ~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 266 RGERLPR--PDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp TTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCC--CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1111111 1223456889999999999999999999999986
No 158
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=8e-37 Score=334.31 Aligned_cols=247 Identities=18% Similarity=0.254 Sum_probs=194.6
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-----cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-----GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYE 853 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-----~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 853 (1048)
....||+|+||.||+|+.. +++.||+|.+........ .....+++..++.++||||+++++++.+.+..++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEe
Confidence 3456899999999999987 688999999876433221 2234556677788999999999999999999999999
Q ss_pred ccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC----ceEEecccccccc
Q 045493 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY----KAHVSDFGTAKFL 929 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~----~~kl~DfG~a~~~ 929 (1048)
|+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||.+...
T Consensus 89 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 89 LVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred ecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 99999999999653 3489999999999999999999999 999999999999999877 8999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCC
Q 045493 930 KPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPP 1009 (1048)
Q Consensus 930 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1048)
.... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ......+.......
T Consensus 163 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~~ 230 (283)
T 3bhy_A 163 EAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-----------QETLTNISAVNYDF 230 (283)
T ss_dssp C---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHTTCCCC
T ss_pred cCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-----------HHHHHHhHhcccCC
Confidence 5332 23445799999999999998999999999999999999999999863221 11222222222222
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1010 PLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1010 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...........+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 231 DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 22222233456889999999999999999999987
No 159
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-37 Score=338.26 Aligned_cols=250 Identities=22% Similarity=0.296 Sum_probs=192.7
Q ss_pred eeeecccccccEEEEEEcCC-C---ceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeE-EEEEEcc
Q 045493 781 MVLHGTGGCGTVYKAELTSG-D---TRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHL-FLVYEYL 855 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~-~---~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~-~lv~e~~ 855 (1048)
...||+|+||+||+|.+.+. + .+|+|++.............+++..++.++||||+++++++.+.+.. ++||||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 35689999999999986533 2 58889886544333333445667777889999999999999766554 9999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC--
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS-- 933 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~-- 933 (1048)
.+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 106 ~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 180 (298)
T 3pls_A 106 CHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180 (298)
T ss_dssp TTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred cCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence 999999999653 34578899999999999999999999 99999999999999999999999999998654321
Q ss_pred --CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493 934 --SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus 934 --~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
.......+|+.|+|||.+.+..++.++||||+||++|||++|..|+.... ........+......+..
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 250 (298)
T 3pls_A 181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI----------DPFDLTHFLAQGRRLPQP 250 (298)
T ss_dssp CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS----------CGGGHHHHHHTTCCCCCC
T ss_pred ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC----------CHHHHHHHhhcCCCCCCC
Confidence 22334568899999999999999999999999999999999766643111 111111122122211111
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1012 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
......+.+++.+||+.||++|||++|+++.|++
T Consensus 251 ---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 251 ---EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1123468889999999999999999999999863
No 160
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.2e-37 Score=333.48 Aligned_cols=245 Identities=21% Similarity=0.258 Sum_probs=198.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||.||+|.+. ++..+|+|++....... .....+++..++.++||||+++++++.+.+..++||||++++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (277)
T 3f3z_A 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED-VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG 91 (277)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC-HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCC
Confidence 3456899999999999887 46688999987643332 234456777788899999999999999999999999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE---CCCCceEEeccccccccCCCCCC
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL---DLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||++...... ..
T Consensus 92 ~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~-~~ 164 (277)
T 3f3z_A 92 ELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KM 164 (277)
T ss_dssp BHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT-SC
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc-cc
Confidence 9999986533 388999999999999999999999 99999999999999 78899999999999876543 33
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
.....||+.|+|||++.+ .++.++||||+|+++|||++|+.||.... .......+.......+.....
T Consensus 165 ~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 232 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPT-----------DSEVMLKIREGTFTFPEKDWL 232 (277)
T ss_dssp BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCHHHHT
T ss_pred hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHhCCCCCCchhhh
Confidence 345679999999999876 48999999999999999999999986322 122333333344333332222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 233 NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 34567889999999999999999999975
No 161
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=349.69 Aligned_cols=255 Identities=18% Similarity=0.179 Sum_probs=185.6
Q ss_pred ceeeecccccccEEEEEEc----CCCceeeEEeccCCCCcc----------cchhhHHHHHHhhcccCceeeEeeEeee-
Q 045493 780 KMVLHGTGGCGTVYKAELT----SGDTRAVKKLHSLPTGEI----------GINQKGFVSEITEIRHRNIVKFYGFCSH- 844 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~----------~~~~~~~~~~l~~l~h~niv~~~~~~~~- 844 (1048)
....||+|+||.||+|.+. ++..+|+|++........ ......+...+..++||||+++++++..
T Consensus 41 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 41 LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEE
T ss_pred EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccc
Confidence 3456899999999999886 567889998865432110 0011233444567789999999999987
Q ss_pred ---CCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC--ceE
Q 045493 845 ---TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY--KAH 919 (1048)
Q Consensus 845 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~--~~k 919 (1048)
....|+||||+ +++|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+|
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSEE
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcEE
Confidence 77899999999 999999997543 589999999999999999999999 999999999999999887 999
Q ss_pred EeccccccccCCCCC-------CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCccc
Q 045493 920 VSDFGTAKFLKPDSS-------NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPA 992 (1048)
Q Consensus 920 l~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 992 (1048)
|+|||+++.+..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~ 267 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK------DP 267 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT------CH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc------cc
Confidence 999999987643221 12445799999999999999999999999999999999999999853110 00
Q ss_pred ccchhhhhhhccCCCCCCchhH---HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 993 ANMNIVVNDLIDSRLPPPLGEV---EEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
.... ..........+...... .....++.+++.+||+.||++|||++++++.|++
T Consensus 268 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 268 VAVQ-TAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp HHHH-HHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred HHHH-HHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0000 00011111111100000 0223468899999999999999999999999874
No 162
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=343.16 Aligned_cols=249 Identities=19% Similarity=0.322 Sum_probs=187.4
Q ss_pred ceeeecccccccEEEEEEc-CCCce----eeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTR----AVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY 854 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~v----avk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 854 (1048)
....||+|+||+||+|++. +++.+ |+|.+.............+++..++.++||||+++++++.... .++|+||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~ 97 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECC
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEe
Confidence 4457899999999999875 45555 5565544333333344556777788899999999999998755 8899999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 98 ~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 98 MPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp CSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred cCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 99999999997532 3488999999999999999999999 999999999999999999999999999987654332
Q ss_pred C--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493 935 N--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus 935 ~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
. .....+|+.|+|||++.+..++.++||||+||++|||++ |+.||..... ......+......+..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~ 241 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----------SEISSILEKGERLPQP 241 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----------GGHHHHHHTTCCCCCC
T ss_pred cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH-----------HHHHHHHHcCCCCCCC
Confidence 2 233456889999999999999999999999999999999 9999864321 1111111111111111
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1012 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
......+.+++.+||+.||++|||++|+++.|++
T Consensus 242 ---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 275 (327)
T 3lzb_A 242 ---PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 275 (327)
T ss_dssp ---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1223458889999999999999999999998863
No 163
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.7e-37 Score=334.92 Aligned_cols=247 Identities=23% Similarity=0.349 Sum_probs=198.5
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
....||+|+||.||+|.+.+++.||+|++....... ....+++..++.++||||+++++++.+.+..++||||+++|+
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~--~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGC 89 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH--HHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCB
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccCCCH--HHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCc
Confidence 345689999999999999888899999987643322 344566777888999999999999999999999999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC-CCccc
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS-SNWSE 938 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~~ 938 (1048)
|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++...... .....
T Consensus 90 L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 90 LSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp HHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 99999653 23478999999999999999999999 99999999999999999999999999998664321 11223
Q ss_pred cccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus 939 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
..+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+......... ...
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----------~~~~~~i~~~~~~~~~---~~~ 230 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----------SEVVEDISTGFRLYKP---RLA 230 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----------HHHHHHHHTTCCCCCC---TTS
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----------HHHHHHHhcCCcCCCC---ccC
Confidence 457889999999998899999999999999999999 8999763221 1122222222111111 112
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
...+.+++.+||+.||++|||++|+++.|+
T Consensus 231 ~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 231 STHVYQIMNHCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 345788999999999999999999999986
No 164
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.4e-37 Score=359.36 Aligned_cols=247 Identities=23% Similarity=0.363 Sum_probs=192.4
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCCH
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSL 860 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 860 (1048)
...||+|+||.||+|.+..+..||||+++..... .....++++.++.++||||+++++++.+ +..++||||+++|+|
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL 265 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 265 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCH
Confidence 4568999999999999988788999998754322 2345667777889999999999999976 678999999999999
Q ss_pred HHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-Ccccc
Q 045493 861 ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS-NWSEL 939 (1048)
Q Consensus 861 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~~ 939 (1048)
.++++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 266 ~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 341 (452)
T 1fmk_A 266 LDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341 (452)
T ss_dssp HHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCC
Confidence 99996432 23488999999999999999999999 999999999999999999999999999987653322 12334
Q ss_pred ccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHH
Q 045493 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKL 1018 (1048)
Q Consensus 940 ~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1048)
.+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+..+...+.. ....
T Consensus 342 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-----------~~~~~~i~~~~~~~~~---~~~~ 407 (452)
T 1fmk_A 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------REVLDQVERGYRMPCP---PECP 407 (452)
T ss_dssp -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----------HHHHHHHHTTCCCCCC---TTSC
T ss_pred cccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHcCCCCCCC---CCCC
Confidence 57789999999999999999999999999999999 9999763221 1222222222111111 1233
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1019 KSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1019 ~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
..+.+++.+||+.||++|||++++++.|+.
T Consensus 408 ~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~ 437 (452)
T 1fmk_A 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLED 437 (452)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 468889999999999999999999999863
No 165
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=6.2e-37 Score=351.21 Aligned_cols=264 Identities=18% Similarity=0.255 Sum_probs=194.9
Q ss_pred Ccceeeeccc--ccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEE
Q 045493 778 EGKMVLHGTG--GCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYE 853 (1048)
Q Consensus 778 ~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 853 (1048)
+.....||+| +||+||+|++. +++.||||++....... ......+++..++.++|||||++++++.+.+..|+|||
T Consensus 27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 106 (389)
T 3gni_B 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 106 (389)
T ss_dssp EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEE
Confidence 4455678999 99999999987 68899999997643322 12233456777788999999999999999999999999
Q ss_pred ccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC
Q 045493 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS 933 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 933 (1048)
|+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+.......
T Consensus 107 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 107 FMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp CCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred ccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 999999999997542 23489999999999999999999999 99999999999999999999999999986543221
Q ss_pred -------CCcccccccccccccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCccccc----------
Q 045493 934 -------SNWSELAGTCGYIAPELAYT--MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAAN---------- 994 (1048)
Q Consensus 934 -------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---------- 994 (1048)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...............
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 262 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccc
Confidence 11223478999999999987 57899999999999999999999998643221000000000
Q ss_pred --chh------------hhhhhccCCC-------CCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 995 --MNI------------VVNDLIDSRL-------PPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 995 --~~~------------~~~~~~~~~~-------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
... ...+...... .+...........+.+++.+||+.||++|||++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 0000000000 00000112234568899999999999999999999853
No 166
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-38 Score=352.28 Aligned_cols=257 Identities=23% Similarity=0.312 Sum_probs=175.8
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhh--cccCceeeEeeEeeeCC----eEEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITE--IRHRNIVKFYGFCSHTQ----HLFLVYE 853 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~e 853 (1048)
....||+|+||.||+|++. ++.||||++..... .....+.+.+.. ++||||+++++++.... ..++|||
T Consensus 7 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 81 (303)
T 3gxj_A 7 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp CCEEEEECSSSEEEEC-CT-TSCEEEEECC-TTH----HHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEE
T ss_pred ehhhccCCCCeEEEEEEEc-CcceEEEEecccch----hhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEe
Confidence 3456899999999999876 89999999864321 112223333333 78999999999998766 7899999
Q ss_pred ccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEeeCCCCCCeEECCCCceEEecccc
Q 045493 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH--------HDCFPPILHRDISSKKVLLDLEYKAHVSDFGT 925 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~ 925 (1048)
|+++|+|.+++++. .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+
T Consensus 82 ~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg~ 154 (303)
T 3gxj_A 82 YHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp CCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC
T ss_pred ccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecCc
Confidence 99999999999643 3778889999999999999999 77 999999999999999999999999999
Q ss_pred ccccCCCCCC----ccccccccccccccccccC------CCCchhhHHHHHHHHHHHHhCCCCCccccccc----CCCcc
Q 045493 926 AKFLKPDSSN----WSELAGTCGYIAPELAYTM------RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL----SLPAP 991 (1048)
Q Consensus 926 a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~----~~~~~ 991 (1048)
++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.|+....... .....
T Consensus 155 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3gxj_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp -CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-
T ss_pred ceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCC
Confidence 9876544332 2334799999999998776 34468999999999999999954433211100 00000
Q ss_pred cccchhhhhhhccCCCCCCch---hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 992 AANMNIVVNDLIDSRLPPPLG---EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
..........+......+... ...+....+.+++.+||+.||++|||++|++++|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 294 (303)
T 3gxj_A 235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC
T ss_pred CccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 111111112222222221111 113556789999999999999999999999999974
No 167
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.9e-37 Score=362.83 Aligned_cols=250 Identities=21% Similarity=0.235 Sum_probs=197.8
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
.....||+|+||.||+|+.. +++.||+|++..... .........+.+.++.++||||+++++++.+.+..|+||||+
T Consensus 187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~ 266 (576)
T 2acx_A 187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 266 (576)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcC
Confidence 34557999999999999886 688999999865321 111223455677788899999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.+++...+ ...+++..+..++.||+.||+|||+. +||||||||+||+++.+|++||+|||+++..... ..
T Consensus 267 ~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~-~~ 341 (576)
T 2acx_A 267 NGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-QT 341 (576)
T ss_dssp CSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT-CC
T ss_pred CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC-cc
Confidence 9999999997543 23489999999999999999999999 9999999999999999999999999999876543 33
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..........+.......+ .
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~-------~~~~~~i~~~i~~~~~~~p----~ 410 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK-------KIKREEVERLVKEVPEEYS----E 410 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSS-------CCCHHHHHHHHHHCCCCCC----T
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccccc-------chhHHHHHHHhhcccccCC----c
Confidence 4456899999999999998999999999999999999999999874321 0011111111111111111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRP-----TMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 1044 (1048)
.....+.+++.+||+.||++|| +++|+++
T Consensus 411 ~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 411 RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 2235688899999999999999 7888875
No 168
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=337.74 Aligned_cols=245 Identities=22% Similarity=0.343 Sum_probs=173.5
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCC--cccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG--EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|+.. +++.||+|.+...... .......+++..++.++||||+++++++.+.+..++||||++
T Consensus 15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (278)
T 3cok_A 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCC
Confidence 3456899999999999875 6889999998643211 111234556677788999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+..........
T Consensus 95 ~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 169 (278)
T 3cok_A 95 NGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169 (278)
T ss_dssp TEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred CCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcc
Confidence 99999999753 24588999999999999999999999 99999999999999999999999999998765444444
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
....||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ............+ ..
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------~~~~~~~~~~~~~----~~ 234 (278)
T 3cok_A 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----------TLNKVVLADYEMP----SF 234 (278)
T ss_dssp ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------CCSSCCCCC----TT
T ss_pred eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----------HHHHHhhcccCCc----cc
Confidence 45679999999999998889999999999999999999999986432110 0111111111111 11
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 235 LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 2345788999999999999999999986
No 169
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=347.51 Aligned_cols=248 Identities=19% Similarity=0.306 Sum_probs=186.9
Q ss_pred CcceeeecccccccEEEEEEcCCCceeeEEeccCCCCcc-cchhhHHHHHHhhccc--CceeeEeeEeeeCCeEEEEEEc
Q 045493 778 EGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRH--RNIVKFYGFCSHTQHLFLVYEY 854 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~ 854 (1048)
+.....||+|+||.||+|...+++.||||++........ .....+++..+..++| |||+++++++...+..++|||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 89 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 89 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-
Confidence 344567899999999999998899999999875433221 1233456666777766 999999999999999999999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+.+|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++.......
T Consensus 90 ~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 90 CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 5678999999754 3488999999999999999999999 999999999999997 68899999999987654432
Q ss_pred C--cccccccccccccccccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhh
Q 045493 935 N--WSELAGTCGYIAPELAYT-----------MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVND 1001 (1048)
Q Consensus 935 ~--~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1048)
. ....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .......
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----------~~~~~~~ 232 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----------QISKLHA 232 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS----------HHHHHHH
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh----------HHHHHHH
Confidence 2 335679999999999865 6789999999999999999999999863211 1111222
Q ss_pred hccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1002 LIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
..++....... ......+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~--~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 233 IIDPNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHCTTSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhcCCcccCCc--ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 22222111111 1112357889999999999999999999863
No 170
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=368.66 Aligned_cols=245 Identities=22% Similarity=0.276 Sum_probs=192.5
Q ss_pred eecccccccEEEEEEc---CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 783 LHGTGGCGTVYKAELT---SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 783 ~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
.||+|+||.||+|.+. ++..||||+++............++++.++.++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 5899999999999875 3556999998765443333445667777889999999999999976 56999999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc---
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW--- 936 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~--- 936 (1048)
|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 422 L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 422 LHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp HHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred HHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 99999643 34589999999999999999999999 99999999999999999999999999998765432221
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+..+...... .
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----------~~~~~~i~~~~~~~~p---~ 562 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----------PEVMAFIEQGKRMECP---P 562 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-----------HHHHHHHHTTCCCCCC---T
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-----------HHHHHHHHcCCCCCCC---C
Confidence 22345689999999999999999999999999999998 9999864221 1222222222221111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.....+.+++.+||+.||++|||++++++.|+
T Consensus 563 ~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 563 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 23456889999999999999999999999886
No 171
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.7e-37 Score=335.36 Aligned_cols=241 Identities=20% Similarity=0.306 Sum_probs=171.6
Q ss_pred eeeecccccccEEEEEEc-CCCceeeEEeccCCCCc--ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE--IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
...||+|+||.||+|++. +++.||+|++....... ......+++..++.++||||+++++++.+.+..++||||+ +
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~ 96 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-C
Confidence 446899999999999875 67899999986543222 1223456677778899999999999999999999999999 6
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
+++.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...... ....
T Consensus 97 ~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~ 169 (275)
T 2eue_A 97 NELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLK 169 (275)
T ss_dssp EEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----------
T ss_pred CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc-cccc
Confidence 6888887653 3488999999999999999999999 9999999999999999999999999999866433 2234
Q ss_pred ccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 938 ELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
...||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... .......+.......+ ..
T Consensus 170 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----------~~~~~~~~~~~~~~~~----~~ 234 (275)
T 2eue_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----------IPVLFKNISNGVYTLP----KF 234 (275)
T ss_dssp -----CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHTCCCCC----TT
T ss_pred CCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCC----cc
Confidence 4579999999999988765 789999999999999999999986322 1112222222222211 11
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
....+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 2345788999999999999999999975
No 172
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.6e-37 Score=350.94 Aligned_cols=248 Identities=19% Similarity=0.299 Sum_probs=188.7
Q ss_pred CcceeeecccccccEEEEEEcCCCceeeEEeccCCCCc-ccchhhHHHHHHhhcc--cCceeeEeeEeeeCCeEEEEEEc
Q 045493 778 EGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIR--HRNIVKFYGFCSHTQHLFLVYEY 854 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~ 854 (1048)
+.....||+|+||.||+|....++.||||++....... ......+++..+..++ ||||+++++++...+..|+|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E- 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence 34456799999999999998889999999986543322 1223355666677775 5999999999999999999999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+.+|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+.....
T Consensus 137 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 137 CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 56889999997543 478889999999999999999999 999999999999995 58999999999987654332
Q ss_pred --Ccccccccccccccccccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhh
Q 045493 935 --NWSELAGTCGYIAPELAYT-----------MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVND 1001 (1048)
Q Consensus 935 --~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1048)
.....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .......
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----------~~~~~~~ 279 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----------QISKLHA 279 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC----------HHHHHHH
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH----------HHHHHHH
Confidence 2345679999999999865 4689999999999999999999999863211 1112223
Q ss_pred hccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1002 LIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
+.++........ .....+.+++.+||+.||++|||++|+++.
T Consensus 280 ~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 280 IIDPNHEIEFPD--IPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHCTTSCCCCCC--CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhCccccCCCCc--cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 333222211111 112457889999999999999999999863
No 173
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.2e-37 Score=337.12 Aligned_cols=244 Identities=21% Similarity=0.314 Sum_probs=196.4
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc--ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE--IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|++. +++.+|+|.+....... .......++..++.++||||+++++++.+.+..++||||++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCC
Confidence 4457899999999999987 46778888876543221 12233456666788899999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+++|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+..........
T Consensus 99 ~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (294)
T 2rku_A 99 RRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 172 (294)
T ss_dssp TCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcccc
Confidence 99999998653 3488999999999999999999999 99999999999999999999999999998776554445
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
....||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ......+.......+. .
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~----~ 237 (294)
T 2rku_A 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----------KETYLRIKKNEYSIPK----H 237 (294)
T ss_dssp CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHTTCCCCCT----T
T ss_pred ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHhhccCCCcc----c
Confidence 566799999999999998899999999999999999999999863221 1111222222222111 1
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
....+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 238 INPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 2245788999999999999999999986
No 174
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1e-36 Score=345.25 Aligned_cols=247 Identities=21% Similarity=0.377 Sum_probs=195.7
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-------cchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-------GINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFL 850 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-------~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~l 850 (1048)
....||+|+||.||+|++. +|+.||||++........ ......++..+.++ +||||+++++++......|+
T Consensus 98 ~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 177 (365)
T 2y7j_A 98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL 177 (365)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEE
T ss_pred cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEE
Confidence 3456899999999999986 689999999865432211 11223445556677 79999999999999999999
Q ss_pred EEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccC
Q 045493 851 VYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK 930 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~ 930 (1048)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..+.
T Consensus 178 v~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 178 VFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 99999999999999653 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCcccccccccccccccccc------CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhcc
Q 045493 931 PDSSNWSELAGTCGYIAPELAYT------MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLID 1004 (1048)
Q Consensus 931 ~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1048)
.. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... .......+..
T Consensus 252 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~-----------~~~~~~~i~~ 319 (365)
T 2y7j_A 252 PG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR-----------QILMLRMIME 319 (365)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHH
T ss_pred CC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHh
Confidence 43 33445689999999999863 357899999999999999999999986322 1112222223
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1005 SRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1005 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.........+......+.+++.+||+.||++|||++|+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 320 GQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp TCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 3333222222233456889999999999999999999987
No 175
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=340.96 Aligned_cols=259 Identities=20% Similarity=0.279 Sum_probs=188.5
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||+||+|++. +++.||+|++........ .....++++.++.++||||+++++++.+.+..++||||+++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCC
Confidence 3456899999999999986 588899998865433221 22234567777889999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
++|.++++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++..........
T Consensus 87 ~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (311)
T 4agu_A 87 TVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160 (311)
T ss_dssp EHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred chHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence 9999988643 3488999999999999999999999 999999999999999999999999999987765555555
Q ss_pred cccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCC---------ccccc-chhhhhhhccCC
Q 045493 938 ELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLP---------APAAN-MNIVVNDLIDSR 1006 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~ 1006 (1048)
...||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......... ..... ............
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence 6689999999999876 568999999999999999999999986433210000 00000 000000000001
Q ss_pred CCCCc------hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1007 LPPPL------GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1007 ~~~~~------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.+.+. .........+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 11100 000123456889999999999999999999986
No 176
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.3e-37 Score=337.32 Aligned_cols=248 Identities=21% Similarity=0.314 Sum_probs=188.9
Q ss_pred eeeecccccccEEEEEEcCC----CceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEe-eeCCeEEEEEEcc
Q 045493 781 MVLHGTGGCGTVYKAELTSG----DTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFC-SHTQHLFLVYEYL 855 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~ 855 (1048)
...||+|+||+||+|.+... ..+|+|++..............+...+++++||||+++++++ ...+..++||||+
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 45689999999999986532 247888876544333333345667777889999999999986 4566789999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC--
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS-- 933 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~-- 933 (1048)
++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 110 ~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 184 (298)
T 3f66_A 110 KHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 184 (298)
T ss_dssp TTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred CCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence 999999999653 34478999999999999999999999 99999999999999999999999999998764332
Q ss_pred --CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCC-CCCcccccccCCCcccccchhhhhhhccCCCCCC
Q 045493 934 --SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGK-HPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP 1010 (1048)
Q Consensus 934 --~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1048)
.......+|+.|+|||.+.+..++.++||||+|+++|||++|. .||.... ................
T Consensus 185 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 253 (298)
T 3f66_A 185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----------TFDITVYLLQGRRLLQ 253 (298)
T ss_dssp BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-----------TTTHHHHHHTTCCCCC
T ss_pred ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-----------HHHHHHHHhcCCCCCC
Confidence 1223456788999999999999999999999999999999954 4543211 1111112222221111
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1011 LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1011 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.. .....+.+++.+||+.||++|||++|+++.|+
T Consensus 254 ~~---~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 254 PE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 12245888999999999999999999999986
No 177
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-36 Score=359.95 Aligned_cols=246 Identities=22% Similarity=0.342 Sum_probs=194.5
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCC-cccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG-EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||+||+|++. +++.||+|++...... .......+++..++.++||||++++++|.+....|+||||+++
T Consensus 41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 4556899999999999986 6788999998764322 2223445677778899999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC---CceEEeccccccccCCCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE---YKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~---~~~kl~DfG~a~~~~~~~~ 934 (1048)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.. +.+||+|||+++..... .
T Consensus 121 g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~-~ 193 (494)
T 3lij_A 121 GELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ-K 193 (494)
T ss_dssp CBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT-B
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC-c
Confidence 9999988654 3488999999999999999999999 99999999999999764 55999999999876543 3
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
.....+||+.|+|||++. ..++.++||||+||++|+|++|+.||.... .......+...........+
T Consensus 194 ~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----------~~~~~~~i~~~~~~~~~~~~ 261 (494)
T 3lij_A 194 KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT-----------DQEILRKVEKGKYTFDSPEW 261 (494)
T ss_dssp CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHTCCCCCSGGG
T ss_pred cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCCchhc
Confidence 344567999999999886 469999999999999999999999986322 12233333334433333333
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
......+.+++.+||+.||++|||+.|+++
T Consensus 262 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 262 KNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 344567889999999999999999999985
No 178
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.5e-37 Score=342.24 Aligned_cols=253 Identities=22% Similarity=0.314 Sum_probs=195.0
Q ss_pred cceeeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCC-eEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQ-HLFL 850 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~-~~~l 850 (1048)
.....||+|+||+||+|++. +++.||+|++..............++..+..+ +||||+++++++...+ ..++
T Consensus 30 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~l 109 (316)
T 2xir_A 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109 (316)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred eeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEE
Confidence 34557899999999999752 45789999987544332223344566666777 6999999999987654 5899
Q ss_pred EEEccCCCCHHHHHhcccc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc
Q 045493 851 VYEYLERGSLATILSNEAT-------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK 917 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~ 917 (1048)
||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~ 186 (316)
T 2xir_A 110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNV 186 (316)
T ss_dssp EEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCC
Confidence 9999999999999975432 12278899999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCccccc
Q 045493 918 AHVSDFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAAN 994 (1048)
Q Consensus 918 ~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 994 (1048)
+||+|||+++........ .....||+.|+|||++.+..++.++||||+||++|||++ |+.||.....
T Consensus 187 ~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---------- 256 (316)
T 2xir_A 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---------- 256 (316)
T ss_dssp EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC----------
T ss_pred EEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch----------
Confidence 999999999876544332 234567889999999999999999999999999999998 9999763221
Q ss_pred chhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 995 MNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.......+......... ......+.+++.+||+.||++|||+.|+++.|+
T Consensus 257 ~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 257 DEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp SHHHHHHHHHTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hHHHHHHhccCccCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111111111111 112345888999999999999999999999986
No 179
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.4e-37 Score=334.93 Aligned_cols=246 Identities=18% Similarity=0.274 Sum_probs=190.0
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeeeC--CeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSHT--QHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~ 856 (1048)
....||+|+||+||+|++. ++.||||++........ .....+++..+++++||||+++++++.+. +..++||||++
T Consensus 14 ~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 3456899999999999986 88899999876432221 11233444455677899999999999876 78899999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP--ILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
+|+|.++++... ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++.++++|||++.....
T Consensus 93 ~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~--- 165 (271)
T 3kmu_A 93 YGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS--- 165 (271)
T ss_dssp TCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC---
T ss_pred CCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc---
Confidence 999999997543 23589999999999999999999998 7 99999999999999999999999998764332
Q ss_pred CccccccccccccccccccCCCC---chhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493 935 NWSELAGTCGYIAPELAYTMRAN---EKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~---~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
....||+.|+|||++.+..++ .++||||+||++|||++|+.||..... .............+..
T Consensus 166 --~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~ 232 (271)
T 3kmu_A 166 --PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-----------MEIGMKVALEGLRPTI 232 (271)
T ss_dssp --TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-----------HHHHHHHHHSCCCCCC
T ss_pred --cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-----------HHHHHHHHhcCCCCCC
Confidence 234689999999999876544 489999999999999999999863221 1111111111111111
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1012 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
.......+.+++.+||+.||++|||++|+++.|++
T Consensus 233 --~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 233 --PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 01223468889999999999999999999999863
No 180
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9e-37 Score=332.59 Aligned_cols=246 Identities=24% Similarity=0.303 Sum_probs=194.9
Q ss_pred eeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
...||+|+||.||+|... +++.||+|++.............+++..++.++||||+++++++.+.+..++||||+++|+
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 456899999999999886 6888999998654433333445566777788999999999999999999999999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC--CCcc
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWS 937 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~ 937 (1048)
|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....... ....
T Consensus 92 L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 165 (276)
T 2yex_A 92 LFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165 (276)
T ss_dssp GGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred HHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhccc
Confidence 99998643 3488999999999999999999999 99999999999999999999999999998654322 2234
Q ss_pred ccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 938 ELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
...||+.|+|||++.+..+ +.++||||+|+++|||++|+.||...... ......+....... .....
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----------~~~~~~~~~~~~~~--~~~~~ 233 (276)
T 2yex_A 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS----------CQEYSDWKEKKTYL--NPWKK 233 (276)
T ss_dssp CCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT----------SHHHHHHHTTCTTS--TTGGG
T ss_pred CCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH----------HHHHHHhhhccccc--Cchhh
Confidence 5678999999999987765 78999999999999999999998642210 01111111111111 11122
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
....+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 234 IDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 3446788999999999999999999986
No 181
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.2e-36 Score=360.62 Aligned_cols=247 Identities=23% Similarity=0.366 Sum_probs=197.0
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCC------------cccchhhHHHHHHhhcccCceeeEeeEeeeC
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG------------EIGINQKGFVSEITEIRHRNIVKFYGFCSHT 845 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~------------~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 845 (1048)
.....||+|+||+||+|+.. +++.||+|++...... ........++..++.++||||+++++++.+.
T Consensus 39 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 118 (504)
T 3q5i_A 39 FKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDK 118 (504)
T ss_dssp EEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred EEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 34557899999999999886 5788999998754322 1122344567777889999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC---ceEEec
Q 045493 846 QHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY---KAHVSD 922 (1048)
Q Consensus 846 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~---~~kl~D 922 (1048)
+..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 119 ~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 119 KYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred CEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 99999999999999999986543 489999999999999999999999 999999999999999776 699999
Q ss_pred cccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhh
Q 045493 923 FGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDL 1002 (1048)
Q Consensus 923 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1048)
||+++..... ......+||+.|+|||++. +.++.++||||+||++|+|++|+.||.... .......+
T Consensus 193 fg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----------~~~~~~~i 259 (504)
T 3q5i_A 193 FGLSSFFSKD-YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN-----------DQDIIKKV 259 (504)
T ss_dssp CTTCEECCTT-SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHH
T ss_pred CCCCEEcCCC-CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHH
Confidence 9999876543 3345567999999999987 468999999999999999999999986322 22333444
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1003 IDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1003 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...........+......+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 260 EKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 444444333333444567899999999999999999999986
No 182
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.2e-36 Score=359.11 Aligned_cols=247 Identities=21% Similarity=0.329 Sum_probs=198.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCC-cccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG-EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||+||+|++. +++.||||++...... .......+++..++.++||||+++++++.+....|+||||+++
T Consensus 26 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 105 (486)
T 3mwu_A 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105 (486)
T ss_dssp EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence 3456899999999999886 6889999998653221 1223345677778899999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC---CCCceEEeccccccccCCCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD---LEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~---~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++..... .
T Consensus 106 ~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~ 178 (486)
T 3mwu_A 106 GELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-T 178 (486)
T ss_dssp CBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC-C
Confidence 99999986543 488999999999999999999999 999999999999995 4567999999999876543 3
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
.....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .......+.........+.+
T Consensus 179 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-----------~~~~~~~i~~~~~~~~~~~~ 246 (486)
T 3mwu_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN-----------EYDILKRVETGKYAFDLPQW 246 (486)
T ss_dssp ---CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHTCCCSCSGGG
T ss_pred ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCCCccc
Confidence 3445679999999999876 59999999999999999999999986322 12233333444444333334
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
......+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 4455678899999999999999999999873
No 183
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.2e-37 Score=334.35 Aligned_cols=242 Identities=26% Similarity=0.380 Sum_probs=190.2
Q ss_pred eeeecccccccEEEEEEc-CCCceeeEEeccCCCC--cccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG--EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
...||+|+||+||+|.+. +++.||+|++...... .......+++..++.++||||+++++++.+.+..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 456899999999999877 5668999988543211 1122345566777888999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 94 ~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~ 165 (279)
T 3fdn_A 94 GTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRT 165 (279)
T ss_dssp EEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--------
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc--ccc
Confidence 99999996543 488999999999999999999998 9999999999999999999999999998654332 234
Q ss_pred ccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493 938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
...||+.|+|||++.+..++.++||||+|+++|||++|+.||.... .......+.......+. ..
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~~----~~ 230 (279)
T 3fdn_A 166 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-----------YQETYKRISRVEFTFPD----FV 230 (279)
T ss_dssp --CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS-----------HHHHHHHHHHTCCCCCT----TS
T ss_pred ccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc-----------HHHHHHHHHhCCCCCCC----cC
Confidence 5678999999999999999999999999999999999999986322 11112222222222111 12
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
...+.+++.+||+.||++|||++|+++.
T Consensus 231 ~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 231 TEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 3457789999999999999999999864
No 184
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.1e-36 Score=336.96 Aligned_cols=245 Identities=22% Similarity=0.313 Sum_probs=195.0
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||.||+|+.. +++.||+|++....... .....+++..++.++||||+++++++.+.+..++||||+++|
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (304)
T 2jam_A 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR-DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGG 91 (304)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeeeccCCCCceEEEEEECCCCCEEEEEEEecccccc-hHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCc
Confidence 3456899999999999886 68899999987543222 234556777788999999999999999999999999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE---CCCCceEEeccccccccCCCCCC
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL---DLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||.+..... ..
T Consensus 92 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~--~~ 163 (304)
T 2jam_A 92 ELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN--GI 163 (304)
T ss_dssp BHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC--BT
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC--Cc
Confidence 9999986533 488999999999999999999999 99999999999999 7789999999999975432 22
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.............
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----------~~~~~~~i~~~~~~~~~~~~~ 232 (304)
T 2jam_A 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET-----------ESKLFEKIKEGYYEFESPFWD 232 (304)
T ss_dssp THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHHHHHHCCCCCCTTTTT
T ss_pred cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHcCCCCCCccccc
Confidence 344578999999999999999999999999999999999999986322 111222222222221111122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 233 DISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 33456889999999999999999999986
No 185
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.9e-37 Score=338.72 Aligned_cols=252 Identities=25% Similarity=0.387 Sum_probs=183.9
Q ss_pred cceeeecccccccEEEEEEcCCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 779 GKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
.....||+|+||+||+|++. ..+|+|+++...... ......+++..++.++||||+++++++. ....++||||+++
T Consensus 27 ~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~ 103 (289)
T 3og7_A 27 TVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEG 103 (289)
T ss_dssp EEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCCE
T ss_pred eeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEEecCC
Confidence 34557899999999999865 359999886543322 1223455677788899999999999764 5568999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC--CCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD--SSN 935 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~--~~~ 935 (1048)
++|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 104 ~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 104 SSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp EEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred CcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 9999999643 34588999999999999999999999 9999999999999999999999999999865432 222
Q ss_pred ccccccccccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493 936 WSELAGTCGYIAPELAY---TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
.....||+.|+|||++. +..++.++||||+|+++|||++|+.||..... .......+......+...
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~~~ 248 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN----------RDQIIEMVGRGSLSPDLS 248 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC----------HHHHHHHHHHTSCCCCTT
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch----------HHHHHHHhcccccCcchh
Confidence 34567999999999986 56788999999999999999999999863221 111111111122211111
Q ss_pred -hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1013 -EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1013 -~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
........+.+++.+||+.||++|||++|+++.|++
T Consensus 249 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 285 (289)
T 3og7_A 249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285 (289)
T ss_dssp SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 112234568899999999999999999999999863
No 186
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=9.4e-37 Score=341.10 Aligned_cols=250 Identities=22% Similarity=0.340 Sum_probs=193.0
Q ss_pred ceeeecccccccEEEEEEc-CCCc--eeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDT--RAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~--vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|++. ++.. +|+|++..............++..+.++ +||||+++++++.+.+..++||||+
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 108 (327)
T 1fvr_A 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 108 (327)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecC
Confidence 3456899999999999876 4444 4888887544444444556677778888 8999999999999999999999999
Q ss_pred CCCCHHHHHhccc-------------cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEec
Q 045493 856 ERGSLATILSNEA-------------TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSD 922 (1048)
Q Consensus 856 ~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~D 922 (1048)
++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kL~D 185 (327)
T 1fvr_A 109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 185 (327)
T ss_dssp TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECC
T ss_pred CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEEEcc
Confidence 9999999997543 224589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhh
Q 045493 923 FGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVND 1001 (1048)
Q Consensus 923 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1048)
||+++..... .......+++.|+|||++.+..++.++||||+||++|||++ |+.||..... ......
T Consensus 186 fg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----------~~~~~~ 253 (327)
T 1fvr_A 186 FGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----------AELYEK 253 (327)
T ss_dssp TTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----------HHHHHH
T ss_pred cCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-----------HHHHHH
Confidence 9999743321 12233457889999999998889999999999999999998 9999863221 111222
Q ss_pred hccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1002 LIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
+......... ......+.+++.+||+.||++|||++|+++.|+
T Consensus 254 ~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 254 LPQGYRLEKP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp GGGTCCCCCC---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hhcCCCCCCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 2222111111 122346888999999999999999999999886
No 187
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.3e-37 Score=342.69 Aligned_cols=247 Identities=18% Similarity=0.237 Sum_probs=190.5
Q ss_pred eeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-cchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 782 VLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-GINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
+.||+|+||.||+|... +++.||+|++........ ......++..+..+ +||||+++++++.+.+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 56899999999999887 688999999876433221 22334455556666 5799999999999999999999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC---CCceEEeccccccccCCCCCC
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL---EYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~---~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++..... ..
T Consensus 115 ~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~-~~ 189 (327)
T 3lm5_A 115 EIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA-CE 189 (327)
T ss_dssp EGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC------
T ss_pred cHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc-cc
Confidence 999998543 234589999999999999999999999 9999999999999998 789999999999876533 22
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.............
T Consensus 190 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----------~~~~~~i~~~~~~~~~~~~~ 258 (327)
T 3lm5_A 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN-----------QETYLNISQVNVDYSEETFS 258 (327)
T ss_dssp ----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHTCCCCCTTTTT
T ss_pred cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-----------hHHHHHHHhcccccCchhhc
Confidence 3456799999999999999999999999999999999999999863221 11111121212221112222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 259 SVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 33456888999999999999999999976
No 188
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=7.7e-37 Score=371.80 Aligned_cols=244 Identities=20% Similarity=0.259 Sum_probs=196.9
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|+.. +++.||||+++.... .........+.+.+..+ +||+|+++++++.+.+..|+||||+
T Consensus 345 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~ 424 (674)
T 3pfq_A 345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 424 (674)
T ss_dssp EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECC
T ss_pred EEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCc
Confidence 4456899999999999887 577899999875321 11112233344445554 7999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.++++..+ .+++..++.++.||+.||+|||+. +||||||||+|||++.+|++||+|||+|+........
T Consensus 425 ~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~ 498 (674)
T 3pfq_A 425 NGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 498 (674)
T ss_dssp CSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCC
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCCcc
Confidence 9999999997643 489999999999999999999999 9999999999999999999999999999875555555
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
....+||+.|+|||++.+..|+.++||||+||++|||++|+.||...+ .......+.......+.
T Consensus 499 ~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~-----------~~~~~~~i~~~~~~~p~---- 563 (674)
T 3pfq_A 499 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----------EDELFQSIMEHNVAYPK---- 563 (674)
T ss_dssp BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHSSCCCCCT----
T ss_pred cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC-----------HHHHHHHHHhCCCCCCc----
Confidence 667889999999999999999999999999999999999999986322 22333444444333221
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTM-----QKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~ 1044 (1048)
....++.+++.+||++||++||++ +|+++
T Consensus 564 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 564 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 234568889999999999999998 66654
No 189
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=6.9e-37 Score=335.77 Aligned_cols=248 Identities=22% Similarity=0.319 Sum_probs=197.7
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||+||+|.+. +++.||+|++..... .......++..++.++||||+++++++.+.+..++||||+++|
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 94 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 94 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST--HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTE
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCC
Confidence 3456899999999999987 477899999864322 1233456677788899999999999999999999999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC-cc
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN-WS 937 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~ 937 (1048)
+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......... ..
T Consensus 95 ~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 95 NLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp EHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred cHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 9999997543 34589999999999999999999999 9999999999999999999999999999876543322 23
Q ss_pred ccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
...+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||..... ......+......... ..
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~---~~ 236 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------SQVYELLEKDYRMERP---EG 236 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----------GGHHHHHHTTCCCCCC---TT
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHhccCCCCCC---CC
Confidence 3457889999999999999999999999999999999 9999763221 1111111111111111 12
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
....+.+++.+||+.||++|||++|+++.|+
T Consensus 237 ~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 2346888999999999999999999999886
No 190
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.5e-37 Score=343.23 Aligned_cols=244 Identities=21% Similarity=0.314 Sum_probs=196.0
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc--ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE--IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|++. +++.+|+|++....... .......++..++.++||||+++++++.+.+..|+||||++
T Consensus 45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCC
Confidence 3456899999999999887 46778888876543221 12233456666788899999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 125 ~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 198 (335)
T 2owb_A 125 RRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198 (335)
T ss_dssp TCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcccc
Confidence 99999998653 3488999999999999999999999 99999999999999999999999999998776554455
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. .
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----------~~~~~~~~~~~~~~~~----~ 263 (335)
T 2owb_A 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----------KETYLRIKKNEYSIPK----H 263 (335)
T ss_dssp CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHHTCCCCCT----T
T ss_pred cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-----------HHHHHHHhcCCCCCCc----c
Confidence 567799999999999998899999999999999999999999863221 1111122222211111 1
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
....+.+++.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 264 INPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2245778999999999999999999986
No 191
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6e-37 Score=361.79 Aligned_cols=246 Identities=22% Similarity=0.330 Sum_probs=200.9
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCC--cccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG--EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|+.. +++.||||++...... .......+++..+++++||||+++++++.+.+..|+||||++
T Consensus 30 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 3456899999999999887 7889999998654322 222334567777888999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE---CCCCceEEeccccccccCCCC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL---DLEYKAHVSDFGTAKFLKPDS 933 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~~ 933 (1048)
+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.+...
T Consensus 110 ~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 182 (484)
T 3nyv_A 110 GGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS- 182 (484)
T ss_dssp SCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC-
T ss_pred CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc-
Confidence 99999998653 3488999999999999999999999 99999999999999 46789999999999876543
Q ss_pred CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493 934 SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus 934 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
......+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .......+.........+.
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-----------~~~~~~~i~~~~~~~~~~~ 250 (484)
T 3nyv_A 183 KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN-----------EYDILKKVEKGKYTFELPQ 250 (484)
T ss_dssp CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCSGG
T ss_pred cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHcCCCCCCCcc
Confidence 33455679999999999876 69999999999999999999999986432 1223333444444433333
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
+......+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 251 WKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 4445567889999999999999999999986
No 192
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=8.1e-37 Score=338.99 Aligned_cols=255 Identities=20% Similarity=0.321 Sum_probs=187.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc--ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE--IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|... +++.||+|++....... ......+++..++.++||||+++++++...+..++||||++
T Consensus 36 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 3456899999999999875 68899999987533221 12233456667788899999999999999999999999999
Q ss_pred CCCHHHHHhccc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 857 RGSLATILSNEA-TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 857 ~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
+|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 116 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 192 (310)
T 2wqm_A 116 AGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192 (310)
T ss_dssp SCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------------
T ss_pred CCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc
Confidence 999999996432 234588999999999999999999999 9999999999999999999999999999876554444
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
.....||+.|+|||++.+..++.++||||+|+++|||++|+.||.... .........+.....+.... .
T Consensus 193 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~--~ 261 (310)
T 2wqm_A 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---------MNLYSLCKKIEQCDYPPLPS--D 261 (310)
T ss_dssp ------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC------------CCHHHHHHHHHTTCSCCCCT--T
T ss_pred ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc---------hhHHHHHHHhhcccCCCCcc--c
Confidence 445678999999999999999999999999999999999999975321 01111122222222221110 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
.....+.+++.+||+.||++|||+++++++|++
T Consensus 262 ~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~ 294 (310)
T 2wqm_A 262 HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKR 294 (310)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 223468889999999999999999999999863
No 193
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=9.7e-37 Score=346.36 Aligned_cols=244 Identities=15% Similarity=0.096 Sum_probs=188.6
Q ss_pred CcceeeecccccccEEEEE------EcCCCceeeEEeccCCCCcccchhhHHHHHHhhcc---cCceeeEeeEeeeCCeE
Q 045493 778 EGKMVLHGTGGCGTVYKAE------LTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR---HRNIVKFYGFCSHTQHL 848 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~------~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~---h~niv~~~~~~~~~~~~ 848 (1048)
+.....||+|+||+||+|. ..+++.||+|++..... .....+.+.+..++ |+||+++++++...+..
T Consensus 67 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~ 142 (365)
T 3e7e_A 67 VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP----WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS 142 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH----HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE
T ss_pred EEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh----hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCc
Confidence 3344578999999999993 44688999999865321 22344455555554 99999999999999999
Q ss_pred EEEEEccCCCCHHHHHhccc--cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC-----------C
Q 045493 849 FLVYEYLERGSLATILSNEA--TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL-----------E 915 (1048)
Q Consensus 849 ~lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~-----------~ 915 (1048)
|+||||+++|+|.++++... ....+++..+..++.|++.||+|||+. +||||||||+|||++. +
T Consensus 143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------C
T ss_pred EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccccccc
Confidence 99999999999999996432 234589999999999999999999998 9999999999999998 8
Q ss_pred CceEEeccccccccCC--CCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccc
Q 045493 916 YKAHVSDFGTAKFLKP--DSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAA 993 (1048)
Q Consensus 916 ~~~kl~DfG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 993 (1048)
+.+||+|||+|+.+.. ........+||+.|||||++.+..++.++||||+||++|||+||+.||...... .
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~------~- 292 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG------E- 292 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT------E-
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC------c-
Confidence 9999999999976542 223345668999999999999999999999999999999999999997532210 0
Q ss_pred cchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHhh
Q 045493 994 NMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCR-PTMQKVCNLLC 1047 (1048)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Pt~~evl~~L~ 1047 (1048)
........... ....+.+++..|++.+|.+| |+++++.+.|+
T Consensus 293 -------~~~~~~~~~~~-----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 293 -------CKPEGLFRRLP-----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp -------EEECSCCTTCS-----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred -------eeechhccccC-----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 00111111111 12245567788999999998 57777777664
No 194
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=9.9e-37 Score=333.12 Aligned_cols=248 Identities=21% Similarity=0.277 Sum_probs=190.2
Q ss_pred ceeeecccccccEEEEEEcCC----CceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELTSG----DTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||+||+|.+... ..||+|.+.............+++..++.++||||+++++++.+. ..++||||+
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~ 94 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELY 94 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEECC
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEecC
Confidence 345689999999999986532 248999887543333233345566777888999999999998754 468999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS- 934 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~- 934 (1048)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 95 ~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 169 (281)
T 3cc6_A 95 PYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169 (281)
T ss_dssp TTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred CCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccccccc
Confidence 999999999653 23478999999999999999999999 999999999999999999999999999987654322
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+......+..
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~-- 236 (281)
T 3cc6_A 170 KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-----------KDVIGVLEKGDRLPKP-- 236 (281)
T ss_dssp ---CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-----------GGHHHHHHHTCCCCCC--
T ss_pred ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-----------HHHHHHHhcCCCCCCC--
Confidence 2234457889999999998899999999999999999998 9999863221 1111111111111111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
......+.+++.+||+.||++|||+.|+++.|+
T Consensus 237 -~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 237 -DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 112345888999999999999999999999986
No 195
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.7e-37 Score=337.33 Aligned_cols=250 Identities=25% Similarity=0.334 Sum_probs=194.4
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEee--eCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCS--HTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|+.. +++.||+|++....... ......+++..+++++||||+++++++. .....++||||+
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 3456899999999999886 67889999987543222 1223445666778889999999999874 467899999999
Q ss_pred CCCCHHHHHhccc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEeeCCCCCCeEECCCCceEEecccccccc
Q 045493 856 ERGSLATILSNEA-TAAELDWSKRVNVIKGVANALSYMHHDCFPP-----ILHRDISSKKVLLDLEYKAHVSDFGTAKFL 929 (1048)
Q Consensus 856 ~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 929 (1048)
++|+|.+++.... ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||.++..
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 9999999997543 233489999999999999999999998 7 999999999999999999999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCC
Q 045493 930 KPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPP 1009 (1048)
Q Consensus 930 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1048)
...........||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ......+.....+.
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~i~~~~~~~ 235 (279)
T 2w5a_A 167 NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-----------KELAGKIREGKFRR 235 (279)
T ss_dssp ---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHTCCCC
T ss_pred ccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-----------HHHHHHHhhccccc
Confidence 5443333455789999999999998999999999999999999999999863321 11222222222222
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 045493 1010 PLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLL 1046 (1048)
Q Consensus 1010 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 1046 (1048)
... .....+.+++.+||+.||++|||++|+++.+
T Consensus 236 ~~~---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 236 IPY---RYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp CCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred CCc---ccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 111 2234688899999999999999999999865
No 196
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.4e-36 Score=331.70 Aligned_cols=247 Identities=20% Similarity=0.357 Sum_probs=195.6
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS 859 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 859 (1048)
....||+|+||.||+|...+++.||+|++...... ......+++.++.++||||+++++++.+ +..++||||+++|+
T Consensus 17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~ 93 (279)
T 1qpc_A 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 93 (279)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCB
T ss_pred heeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc--HHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCCC
Confidence 34568999999999999988889999998654322 2344566777888999999999999874 45899999999999
Q ss_pred HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-Cccc
Q 045493 860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS-NWSE 938 (1048)
Q Consensus 860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~ 938 (1048)
|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++....... ....
T Consensus 94 L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 94 LVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp HHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred HHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 999996532 22488999999999999999999999 999999999999999999999999999987654322 1233
Q ss_pred cccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus 939 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
..+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+......... ...
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~---~~~ 235 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRP---DNC 235 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----------HHHHHHHHTTCCCCCC---TTC
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-----------HHHHHHHhcccCCCCc---ccc
Confidence 456789999999998889999999999999999999 8999763221 1111222121111111 122
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
...+.+++.+||+.||++|||++++++.|+
T Consensus 236 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 346888999999999999999999999886
No 197
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.4e-36 Score=337.69 Aligned_cols=254 Identities=19% Similarity=0.278 Sum_probs=186.3
Q ss_pred CcceeeecccccccEEEEEEcC----CCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeeeCC-----e
Q 045493 778 EGKMVLHGTGGCGTVYKAELTS----GDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSHTQ-----H 847 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~-----~ 847 (1048)
+.....||+|+||.||+|.... ++.||+|++........ .....+++..++.++||||+++++++.+.+ .
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 115 (313)
T 3brb_A 36 LILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115 (313)
T ss_dssp EEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred eeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence 3445568999999999997753 34799999865433221 123445667778899999999999997654 3
Q ss_pred EEEEEEccCCCCHHHHHhcc---ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccc
Q 045493 848 LFLVYEYLERGSLATILSNE---ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFG 924 (1048)
Q Consensus 848 ~~lv~e~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG 924 (1048)
.++||||+++|+|.+++... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecC
Confidence 59999999999999998532 2334589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCC--CccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhh
Q 045493 925 TAKFLKPDSS--NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVND 1001 (1048)
Q Consensus 925 ~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1048)
+++....... ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..... ......
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----------~~~~~~ 261 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-----------HEMYDY 261 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----------GGHHHH
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH-----------HHHHHH
Confidence 9987654322 1233457889999999999999999999999999999999 8888763221 112222
Q ss_pred hccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1002 LIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
+......... ......+.+++.+||+.||++|||++++++.|++
T Consensus 262 ~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 262 LLHGHRLKQP---EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp HHTTCCCCCB---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHcCCCCCCC---ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 2222222111 1233468889999999999999999999999863
No 198
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.2e-36 Score=335.44 Aligned_cols=253 Identities=15% Similarity=0.194 Sum_probs=192.6
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEe-eeCCeEEEEEEcc
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFC-SHTQHLFLVYEYL 855 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~ 855 (1048)
+.....||+|+||+||+|++. +++.||+|++...... .....+...++.++|++++..++++ ...+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 4hgt_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred eEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence 344567899999999999874 6788999986554332 2355667777888887777666555 6778889999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE---CCCCceEEeccccccccCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL---DLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~ 932 (1048)
+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 88 -GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp -CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 89999999643 23489999999999999999999999 99999999999999 78899999999999876544
Q ss_pred CC-------CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccC
Q 045493 933 SS-------NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDS 1005 (1048)
Q Consensus 933 ~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1048)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------~~~~~~~~~~ 233 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK--------RQKYERISEK 233 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS--------SSHHHHHHHH
T ss_pred ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh--------hhhhhhhhcc
Confidence 32 12356799999999999999999999999999999999999999874332111 0111111111
Q ss_pred CCCCCch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1006 RLPPPLG-EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1006 ~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
....+.. ........+.+++.+||+.||++|||++++++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 234 KMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred cccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 1111100 00112356889999999999999999999999886
No 199
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.4e-37 Score=351.40 Aligned_cols=258 Identities=21% Similarity=0.316 Sum_probs=178.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcc-cCceeeEeeEeeeC--CeEEEEEEc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIR-HRNIVKFYGFCSHT--QHLFLVYEY 854 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e~ 854 (1048)
....||+|+||.||+|.+. +++.||||++....... ......+++..+..+. ||||+++++++... ...|+||||
T Consensus 13 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~ 92 (388)
T 3oz6_A 13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY 92 (388)
T ss_dssp EEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEEC
T ss_pred EEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecc
Confidence 3456899999999999876 68899999986542222 1122234555567776 99999999999754 378999999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC--
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-- 932 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~-- 932 (1048)
++ |+|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+.+...
T Consensus 93 ~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 93 ME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp CS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred cC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 98 589999864 2478899999999999999999999 9999999999999999999999999999865321
Q ss_pred -------------------CCCcccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCccccccc------
Q 045493 933 -------------------SSNWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL------ 986 (1048)
Q Consensus 933 -------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~------ 986 (1048)
.......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~ 244 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 112345689999999999876 678999999999999999999999986433210
Q ss_pred ---CCCcccc-------cchhhhhhh---c---cCCCCCCchhHH----------HHHHHHHHHHHhccCCCCCCCCCHH
Q 045493 987 ---SLPAPAA-------NMNIVVNDL---I---DSRLPPPLGEVE----------EKLKSMIAVAFLCLDANPDCRPTMQ 1040 (1048)
Q Consensus 987 ---~~~~~~~-------~~~~~~~~~---~---~~~~~~~~~~~~----------~~~~~l~~l~~~cl~~dP~~RPt~~ 1040 (1048)
+.+.... ......... . ..........+. ....++.+++.+||+.||++|||++
T Consensus 245 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~ 324 (388)
T 3oz6_A 245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAN 324 (388)
T ss_dssp HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHH
Confidence 0000000 000000000 0 000000000000 1234688999999999999999999
Q ss_pred HHHHH
Q 045493 1041 KVCNL 1045 (1048)
Q Consensus 1041 evl~~ 1045 (1048)
|+++.
T Consensus 325 e~l~H 329 (388)
T 3oz6_A 325 DALKH 329 (388)
T ss_dssp HHTTS
T ss_pred HHhCC
Confidence 99864
No 200
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8e-37 Score=338.47 Aligned_cols=250 Identities=22% Similarity=0.285 Sum_probs=187.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc--cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI--GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|++. +++.||+|++........ .....+++..++.++||||+++++++...+..|+||||++
T Consensus 38 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 38 LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 3456899999999999986 678899998865432221 1234456667788899999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC-CC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS-SN 935 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~-~~ 935 (1048)
+++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 118 ~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 191 (309)
T 2h34_A 118 GVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ 191 (309)
T ss_dssp CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccccc
Confidence 99999999754 3488999999999999999999999 99999999999999999999999999998765432 22
Q ss_pred ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
.....||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ...........+.......
T Consensus 192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------~~~~~~~~~~~~~~~~~~~ 259 (309)
T 2h34_A 192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL------------SVMGAHINQAIPRPSTVRP 259 (309)
T ss_dssp -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH------------HHHHHHHHSCCCCGGGTST
T ss_pred ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH------------HHHHHHhccCCCCccccCC
Confidence 3355789999999999998999999999999999999999999864321 0111111111111111112
Q ss_pred HHHHHHHHHHHhccCCCCCCCC-CHHHHHHHhh
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRP-TMQKVCNLLC 1047 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~ 1047 (1048)
.....+.+++.+||+.||++|| |++++++.|+
T Consensus 260 ~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 260 GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 2234578899999999999999 9999999886
No 201
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8.8e-37 Score=342.93 Aligned_cols=243 Identities=23% Similarity=0.361 Sum_probs=190.1
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc--cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI--GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
.....||+|+||+||+|+.. +++.||||++........ .....++++.++.++||||+++++++...+..++||||+
T Consensus 57 ~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 136 (348)
T 1u5q_A 57 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC 136 (348)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecC
Confidence 34556899999999999874 688899999865432221 122345666678889999999999999999999999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
+ |++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 137 ~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 137 L-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp S-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred C-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 8 5888887543 23589999999999999999999999 9999999999999999999999999999866432
Q ss_pred ccccccccccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493 936 WSELAGTCGYIAPELAY---TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
....||+.|+|||++. ...++.++||||+||++|||++|+.||...... .....+.....+....
T Consensus 208 -~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~ 275 (348)
T 1u5q_A 208 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----------SALYHIAQNESPALQS 275 (348)
T ss_dssp -CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----------HHHHHHHHSCCCCCCC
T ss_pred -CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----------HHHHHHHhcCCCCCCC
Confidence 3457999999999984 567899999999999999999999997632211 1111111111111110
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
......+.+++.+||+.||++|||++++++
T Consensus 276 --~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 276 --GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 112345778999999999999999999975
No 202
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=9e-37 Score=335.22 Aligned_cols=244 Identities=25% Similarity=0.329 Sum_probs=189.9
Q ss_pred eecccccccEEEEEEc---CCCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 783 LHGTGGCGTVYKAELT---SGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 783 ~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
.||+|+||+||+|.+. +++.||||++........ ......+++.++.++||||+++++++ ..+..++||||+++|
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 6899999999999653 457899999875433221 22345567777888999999999999 567789999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc--
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW-- 936 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~-- 936 (1048)
+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 103 ~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (291)
T 1xbb_A 103 PLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176 (291)
T ss_dssp EHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred CHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccc
Confidence 999999753 3488999999999999999999999 99999999999999999999999999998765443321
Q ss_pred -cccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 937 -SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 937 -~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+.....+...
T Consensus 177 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~--- 242 (291)
T 1xbb_A 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----------SEVTAMLEKGERMGCP--- 242 (291)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----------HHHHHHHHTTCCCCCC---
T ss_pred cccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH-----------HHHHHHHHcCCCCCCC---
Confidence 22346789999999998889999999999999999999 9999864221 1111122122111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
......+.+++.+||+.||++|||+.|+++.|+
T Consensus 243 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 243 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 123346888999999999999999999999986
No 203
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.1e-36 Score=340.51 Aligned_cols=258 Identities=20% Similarity=0.256 Sum_probs=184.4
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||+||+|++. +++.||+|++....... ......+++..++.++||||+++++++.+.+..++||||+++
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 117 (329)
T 3gbz_A 38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN 117 (329)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC
Confidence 3456899999999999876 67889999986543322 122345677778899999999999999999999999999985
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC-----CCCceEEeccccccccCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD-----LEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~-----~~~~~kl~DfG~a~~~~~~ 932 (1048)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++.....
T Consensus 118 -~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~ 190 (329)
T 3gbz_A 118 -DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190 (329)
T ss_dssp -EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred -CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence 9999997543 388999999999999999999999 999999999999994 4556999999999877655
Q ss_pred CCCccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCcccccchhhhhhh
Q 045493 933 SSNWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAANMNIVVNDL 1002 (1048)
Q Consensus 933 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~~~~~~~~~ 1002 (1048)
........||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ..+.............
T Consensus 191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (329)
T 3gbz_A 191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPD 270 (329)
T ss_dssp ---------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhh
Confidence 4455566789999999999875 48999999999999999999999986432210 0000000000000000
Q ss_pred ccCCCCCCc-hhHH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1003 IDSRLPPPL-GEVE-----EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1003 ~~~~~~~~~-~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....+... .... ....++.+++.+||+.||++|||++|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 271 WKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000000000 0001 12356889999999999999999999986
No 204
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.2e-37 Score=356.18 Aligned_cols=258 Identities=19% Similarity=0.253 Sum_probs=186.8
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeC------CeEE
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHT------QHLF 849 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~------~~~~ 849 (1048)
+.....||+|+||+||+|.+. +++.||||++....... ......+++..++.++||||+++++++... ...|
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 143 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 143 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence 334567899999999999876 67889999987542221 122334566677888999999999999654 4679
Q ss_pred EEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccccccc
Q 045493 850 LVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL 929 (1048)
Q Consensus 850 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 929 (1048)
+||||+++ ++.+.+.. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 144 lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 144 LVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred EEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 99999987 46666632 378899999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCccc--ccchhh
Q 045493 930 KPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPA--ANMNIV 998 (1048)
Q Consensus 930 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~--~~~~~~ 998 (1048)
... ......+||+.|+|||++.+..|+.++||||+||++|||++|+.||...+... +.+... ......
T Consensus 215 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~ 293 (464)
T 3ttj_A 215 GTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 293 (464)
T ss_dssp --C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHH
T ss_pred CCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchh
Confidence 532 33455789999999999999999999999999999999999999997543210 000000 000000
Q ss_pred hhhhccC----------------CCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 999 VNDLIDS----------------RLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 999 ~~~~~~~----------------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
....... ..+...........++.+++.+||+.||++|||++|+++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0011110 0111111122335678999999999999999999999863
No 205
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.2e-36 Score=331.95 Aligned_cols=244 Identities=21% Similarity=0.290 Sum_probs=189.4
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeee----CCeEEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSH----TQHLFLVYE 853 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e 853 (1048)
-...||+|+||+||+|.+. ++..||+|++....... ......+++..++.++||||+++++++.. ....++|||
T Consensus 30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence 3446899999999999886 56778888886543222 12234556677788899999999998865 456899999
Q ss_pred ccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeeCCCCCCeEEC-CCCceEEeccccccccC
Q 045493 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP--ILHRDISSKKVLLD-LEYKAHVSDFGTAKFLK 930 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dik~~NIll~-~~~~~kl~DfG~a~~~~ 930 (1048)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||++....
T Consensus 110 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 110 LMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred ecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999753 3478999999999999999999998 7 99999999999998 78999999999997543
Q ss_pred CCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCC
Q 045493 931 PDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP 1010 (1048)
Q Consensus 931 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1048)
. .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .............+.
T Consensus 184 ~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----------~~~~~~~~~~~~~~~- 249 (290)
T 1t4h_A 184 A--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----------AAQIYRRVTSGVKPA- 249 (290)
T ss_dssp T--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----------HHHHHHHHTTTCCCG-
T ss_pred c--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc----------HHHHHHHHhccCCcc-
Confidence 2 23345679999999998764 699999999999999999999999863221 111122222221111
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1011 LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1011 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.........+.+++.+||+.||++|||++|+++
T Consensus 250 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 250 -SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111122346889999999999999999999986
No 206
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.6e-37 Score=347.90 Aligned_cols=256 Identities=21% Similarity=0.283 Sum_probs=192.6
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||+||+|++. +++.||+|++.............+++..++.++||||+++++++...+..++||||+++|
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 37 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 3456899999999999887 678889998875433322233445566667889999999999999999999999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCccc
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 938 (1048)
+|.++++... .+++..+..++.+++.|++|||+.. +|+||||||+||+++.++.+||+|||++...... ....
T Consensus 117 ~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~ 189 (360)
T 3eqc_A 117 SLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS 189 (360)
T ss_dssp BHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--C---
T ss_pred CHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc--cccC
Confidence 9999997543 4889999999999999999999842 7999999999999999999999999999765322 2234
Q ss_pred cccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccC--------------CC---------------
Q 045493 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS--------------LP--------------- 989 (1048)
Q Consensus 939 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~--------------~~--------------- 989 (1048)
..||+.|+|||++.+..++.++||||+||++|||++|+.||........ .+
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 3eqc_A 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269 (360)
T ss_dssp -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence 5799999999999999999999999999999999999999864321000 00
Q ss_pred --cccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 990 --APAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 990 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
..................+... .......+.+++.+||+.||++|||++|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 270 DSRPPMAIFELLDYIVNEPPPKLP--SGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ----CCCHHHHHHHHHHSCCCCCC--TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCcccchhhhhHHhccCCCCCC--cccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000111111111111111 0112346889999999999999999999986
No 207
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.1e-36 Score=340.55 Aligned_cols=252 Identities=22% Similarity=0.302 Sum_probs=192.8
Q ss_pred cceeeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVY 852 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 852 (1048)
.....||+|+||.||+|++. +++.||||++..............++..++.++||||+++++++.+.+..|+||
T Consensus 33 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (327)
T 2yfx_A 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILM 112 (327)
T ss_dssp EEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEE
Confidence 34456899999999999842 467899999865433333334455666778889999999999999999999999
Q ss_pred EccCCCCHHHHHhcccc----ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC---CceEEecccc
Q 045493 853 EYLERGSLATILSNEAT----AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE---YKAHVSDFGT 925 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~---~~~kl~DfG~ 925 (1048)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||+
T Consensus 113 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~ 189 (327)
T 2yfx_A 113 ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189 (327)
T ss_dssp ECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred ecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECcccc
Confidence 99999999999976432 23488999999999999999999999 99999999999999954 4699999999
Q ss_pred ccccCCCCC--CccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhh
Q 045493 926 AKFLKPDSS--NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDL 1002 (1048)
Q Consensus 926 a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1048)
++....... ......||+.|+|||++.+..++.++||||+||++|||+| |+.||.... .......+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----------~~~~~~~~ 258 (327)
T 2yfx_A 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----------NQEVLEFV 258 (327)
T ss_dssp HHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------HHHHHHHH
T ss_pred ccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC-----------HHHHHHHH
Confidence 986543322 2234567899999999999999999999999999999998 899976322 11122222
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1003 IDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1003 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
......... ......+.+++.+||+.||++|||++|+++.|+
T Consensus 259 ~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 259 TSGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hcCCCCCCC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 222222111 122346888999999999999999999999875
No 208
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=3.8e-36 Score=329.18 Aligned_cols=239 Identities=23% Similarity=0.399 Sum_probs=195.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee--------------
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH-------------- 844 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~-------------- 844 (1048)
....||+|+||.||+|.+. +++.||+|++.... ....++++.++.++||||+++++++..
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 89 (284)
T 2a19_B 15 EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR 89 (284)
T ss_dssp EEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred eeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence 4456899999999999987 78899999986532 234567788889999999999998854
Q ss_pred --CCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEec
Q 045493 845 --TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSD 922 (1048)
Q Consensus 845 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~D 922 (1048)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 90 SKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp CEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred cCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEECc
Confidence 455899999999999999997542 34588999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhh
Q 045493 923 FGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDL 1002 (1048)
Q Consensus 923 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1048)
||++....... ......||+.|+|||++.+..++.++||||+|+++|||++|..|+.... ......
T Consensus 166 fg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------------~~~~~~ 231 (284)
T 2a19_B 166 FGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------------KFFTDL 231 (284)
T ss_dssp CTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------------HHHHHH
T ss_pred chhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------------HHHHHh
Confidence 99998765432 2344579999999999999999999999999999999999998854211 111222
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1003 IDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1003 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.....+.. ....+.+++.+||+.||++|||+.|+++.|.
T Consensus 232 ~~~~~~~~------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 232 RDGIISDI------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp HTTCCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hccccccc------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22222221 1234778899999999999999999999875
No 209
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=334.71 Aligned_cols=249 Identities=24% Similarity=0.332 Sum_probs=192.9
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
...+||+|+||.||+|.+. +++.||+|++..... .......+++..++.++||||+++++++.+.+..++||||+++|
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 104 (295)
T 2clq_A 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG 104 (295)
T ss_dssp SBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred CcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch-HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCC
Confidence 3446899999999999875 577899998865432 22234456677788899999999999999999999999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC-CCceEEeccccccccCCCCCCcc
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL-EYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~-~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||.++..........
T Consensus 105 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 105 SLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp EHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred CHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 9999997654444567889999999999999999999 9999999999999987 89999999999987654444445
Q ss_pred ccccccccccccccccCC--CCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493 938 ELAGTCGYIAPELAYTMR--ANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~--~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
...||+.|+|||++.+.. ++.++||||+|+++|||++|+.||...... .............+..+ .
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~------~ 249 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP------QAAMFKVGMFKVHPEIP------E 249 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH------HHHHHHHHHHCCCCCCC------T
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch------hHHHHhhcccccccccc------c
Confidence 567999999999987654 889999999999999999999998632210 00000000011111111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1016 EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1016 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 250 SMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22346788999999999999999999985
No 210
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-37 Score=343.53 Aligned_cols=262 Identities=22% Similarity=0.247 Sum_probs=193.8
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc----ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEE
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE----IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVY 852 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 852 (1048)
+.....||+|+||.||+|++. +++.||+|++....... ......+++..++.++||||+++++++.+.+..++||
T Consensus 12 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (346)
T 1ua2_A 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVF 91 (346)
T ss_dssp -CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEE
T ss_pred cEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEE
Confidence 344567999999999999886 58889999986533221 1223456677788899999999999999999999999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
||+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 92 e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 92 DFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp ECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 99987 899888653 23578889999999999999999999 9999999999999999999999999999887655
Q ss_pred CCCccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCcccccch--hhhh
Q 045493 933 SSNWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAANMN--IVVN 1000 (1048)
Q Consensus 933 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~~~--~~~~ 1000 (1048)
........||+.|+|||++.+. .++.++||||+||++|||++|+.||....... +.+....+.. ....
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence 5555567899999999998764 58999999999999999999999986433210 0000000000 0000
Q ss_pred hhccCCCCCCc--hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1001 DLIDSRLPPPL--GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1001 ~~~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
.......+... .........+.+++.+||+.||++|||++|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000111100 0001223568899999999999999999999864
No 211
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=8.5e-37 Score=335.24 Aligned_cols=241 Identities=22% Similarity=0.327 Sum_probs=188.3
Q ss_pred eeeecccccccEEEEEEcC-C-------CceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEE
Q 045493 781 MVLHGTGGCGTVYKAELTS-G-------DTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVY 852 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~-~-------~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 852 (1048)
...||+|+||+||+|++.. + ..||+|++..... .......+++..++.++||||+++++++.+.+..++||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR-NYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG-GGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 4468999999999998763 3 3588888854332 22233455677788899999999999999999999999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc--------eEEeccc
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK--------AHVSDFG 924 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~--------~kl~DfG 924 (1048)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 92 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg 166 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166 (289)
T ss_dssp ECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred ECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeeccCc
Confidence 9999999999997532 3488999999999999999999999 9999999999999998887 9999999
Q ss_pred cccccCCCCCCcccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCC-CcccccccCCCcccccchhhhhhh
Q 045493 925 TAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHP-GHFLSLLLSLPAPAANMNIVVNDL 1002 (1048)
Q Consensus 925 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1048)
.+..... .....||+.|+|||++.+ ..++.++||||+||++|||++|..| |.... ........
T Consensus 167 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-----------~~~~~~~~ 231 (289)
T 4fvq_A 167 ISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-----------SQRKLQFY 231 (289)
T ss_dssp SCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----------HHHHHHHH
T ss_pred ccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-----------hHHHHHHh
Confidence 9975432 233568899999999987 6789999999999999999996554 33111 11111111
Q ss_pred c-cCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1003 I-DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1003 ~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
. ....+... ...+.+++.+||+.||++|||++|+++.|++
T Consensus 232 ~~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 232 EDRHQLPAPK------AAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp HTTCCCCCCS------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred hccCCCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1 11112111 2347789999999999999999999999874
No 212
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.1e-36 Score=340.89 Aligned_cols=252 Identities=23% Similarity=0.311 Sum_probs=191.0
Q ss_pred cceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhh--cccCceeeEeeEeeeCC----eEEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITE--IRHRNIVKFYGFCSHTQ----HLFLVY 852 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~ 852 (1048)
.....||+|+||.||+|++. ++.||+|++..... .....+.+.+.. ++||||+++++++.... ..++||
T Consensus 45 ~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~----~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~ 119 (342)
T 1b6c_B 45 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 119 (342)
T ss_dssp EEEEEEEEETTEEEEEEEET-TEEEEEEEECGGGH----HHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEE
T ss_pred EEEeeecCCCCcEEEEEEEc-CccEEEEEeCchhH----HHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEE
Confidence 34456899999999999985 88999999864321 122333344443 78999999999998765 799999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEeeCCCCCCeEECCCCceEEeccc
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH--------HDCFPPILHRDISSKKVLLDLEYKAHVSDFG 924 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG 924 (1048)
||+++|+|.+++++. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||
T Consensus 120 e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 192 (342)
T 1b6c_B 120 DYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLG 192 (342)
T ss_dssp CCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEECCCT
T ss_pred eecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEEECC
Confidence 999999999999642 4889999999999999999999 66 99999999999999999999999999
Q ss_pred cccccCCCCCC----ccccccccccccccccccCC------CCchhhHHHHHHHHHHHHhC----------CCCCccccc
Q 045493 925 TAKFLKPDSSN----WSELAGTCGYIAPELAYTMR------ANEKCDVFNFGVLVLEVIEG----------KHPGHFLSL 984 (1048)
Q Consensus 925 ~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~------~~~~~Dvws~Gvvl~elltg----------~~p~~~~~~ 984 (1048)
+++........ .....||+.|+|||++.+.. ++.++||||+||++|||++| +.||.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~ 272 (342)
T 1b6c_B 193 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 272 (342)
T ss_dssp TCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCc
Confidence 99876544322 24457999999999987653 33789999999999999999 555542110
Q ss_pred ccCCCcccccchhhhhhhccCCCCCCch---hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 985 LLSLPAPAANMNIVVNDLIDSRLPPPLG---EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
...........+......+... ...+....+.+++.+||+.||++|||++|++++|++
T Consensus 273 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 333 (342)
T 1b6c_B 273 ------SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333 (342)
T ss_dssp ------SSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred ------CcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 0111111122222222222111 123556789999999999999999999999999863
No 213
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.5e-36 Score=366.65 Aligned_cols=245 Identities=24% Similarity=0.319 Sum_probs=191.0
Q ss_pred eeecccccccEEEEEEc---CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 782 VLHGTGGCGTVYKAELT---SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
..||+|+||+||+|.+. .++.||||+++...... ......++++.++.++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 35899999999999654 45679999987643322 12344566777888999999999999964 558999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC--
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN-- 935 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~-- 935 (1048)
|+|.++++.. ..+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++.+......
T Consensus 454 g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 9999999653 3488999999999999999999999 9999999999999999999999999999877544322
Q ss_pred -ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493 936 -WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus 936 -~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+.........
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----------~~~~~~i~~~~~~~~p-- 594 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----------SEVTAMLEKGERMGCP-- 594 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----------HHHHHHHHTTCCCCCC--
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHcCCCCCCC--
Confidence 223456789999999999999999999999999999998 9999864221 1122222222222111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
.....++.+++.+||+.||++|||++++++.|+
T Consensus 595 -~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 595 -AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp -TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 123356889999999999999999999999986
No 214
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.5e-36 Score=350.16 Aligned_cols=196 Identities=19% Similarity=0.287 Sum_probs=158.8
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeC-----CeEEE
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHT-----QHLFL 850 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~-----~~~~l 850 (1048)
+.....||+|+||.||+|.+. +++.||||++....... ......++++.++.++||||+++++++... ...|+
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 107 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI 107 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEE
Confidence 334557899999999999886 57789999997543221 112334566777888999999999999765 57999
Q ss_pred EEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccC
Q 045493 851 VYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK 930 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~ 930 (1048)
||||+++ +|.++++.. ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|+...
T Consensus 108 v~e~~~~-~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 108 VLEIADS-DLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp EEECCSE-EHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred EEecCCc-CHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 9999875 999999653 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC----------------------Ccccccccccccccccc-ccCCCCchhhHHHHHHHHHHHHhCCCCCc
Q 045493 931 PDSS----------------------NWSELAGTCGYIAPELA-YTMRANEKCDVFNFGVLVLEVIEGKHPGH 980 (1048)
Q Consensus 931 ~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~Dvws~Gvvl~elltg~~p~~ 980 (1048)
.... .....+||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 4321 23567899999999986 56679999999999999999999777764
No 215
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2e-36 Score=354.68 Aligned_cols=191 Identities=21% Similarity=0.281 Sum_probs=145.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeee-----CCeEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSH-----TQHLFLVY 852 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~-----~~~~~lv~ 852 (1048)
....||+|+||+||+|++. +++.||||++....... ......+++..++.++||||+++++++.. ....|+||
T Consensus 57 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 57 IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp ECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEE
Confidence 3456899999999999876 68899999986543222 11233456777788899999999999843 35799999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
||+. |+|.++++.. ..+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+.....
T Consensus 137 e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 209 (458)
T 3rp9_A 137 EIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209 (458)
T ss_dssp CCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred eccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence 9985 6999998653 3489999999999999999999999 9999999999999999999999999999876432
Q ss_pred C---------------------------CCcccccccccccccccc-ccCCCCchhhHHHHHHHHHHHHhCCC
Q 045493 933 S---------------------------SNWSELAGTCGYIAPELA-YTMRANEKCDVFNFGVLVLEVIEGKH 977 (1048)
Q Consensus 933 ~---------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dvws~Gvvl~elltg~~ 977 (1048)
. ......+||+.|+|||++ .+..++.++||||+||++|||++|..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~ 282 (458)
T 3rp9_A 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282 (458)
T ss_dssp TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTST
T ss_pred cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcc
Confidence 1 123456789999999976 46679999999999999999999533
No 216
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.1e-36 Score=341.13 Aligned_cols=259 Identities=23% Similarity=0.334 Sum_probs=189.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|++. +++.||+|++........ .....+++..++.++||||+++++++.+.+..++||||+++
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 29 NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH 108 (331)
T ss_dssp EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCc
Confidence 4457899999999999887 588899999865433221 12234566777889999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
+++.++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 109 ~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (331)
T 4aaa_A 109 TILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182 (331)
T ss_dssp EHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred chHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccC
Confidence 9999887543 3488999999999999999999999 999999999999999999999999999987665555555
Q ss_pred ccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCcccccccCC---------Cccccc----chhhhhhhc
Q 045493 938 ELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSL---------PAPAAN----MNIVVNDLI 1003 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~---------~~~~~~----~~~~~~~~~ 1003 (1048)
...||+.|+|||++.+. .++.++||||+||++|||++|+.||......... ...... .........
T Consensus 183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (331)
T 4aaa_A 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262 (331)
T ss_dssp -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCC
T ss_pred CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccccc
Confidence 66799999999998875 6899999999999999999999998643321000 000000 000000000
Q ss_pred cCCCCCCch---hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1004 DSRLPPPLG---EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1004 ~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.+....... ........+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 111110000 01123457889999999999999999999875
No 217
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.3e-36 Score=333.10 Aligned_cols=252 Identities=15% Similarity=0.198 Sum_probs=193.5
Q ss_pred cceeeecccccccEEEEEE-cCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEe-eeCCeEEEEEEccC
Q 045493 779 GKMVLHGTGGCGTVYKAEL-TSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFC-SHTQHLFLVYEYLE 856 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~ 856 (1048)
.....||+|+||.||+|++ .+++.||+|++...... .....+...++.++|++++..++++ ...+..++||||+
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 3uzp_A 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence 3455789999999999987 47889999988654332 2455677778888888766666555 6677889999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC---CCCceEEeccccccccCCCC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD---LEYKAHVSDFGTAKFLKPDS 933 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~---~~~~~kl~DfG~a~~~~~~~ 933 (1048)
+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++......
T Consensus 88 ~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (296)
T 3uzp_A 88 GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence 88999999643 23589999999999999999999999 999999999999994 78999999999998765443
Q ss_pred CC-------ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCC
Q 045493 934 SN-------WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSR 1006 (1048)
Q Consensus 934 ~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1048)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......+....
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~~~~~~~~~ 234 (296)
T 3uzp_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT--------KRQKYERISEKK 234 (296)
T ss_dssp TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS--------SSSHHHHHHHHH
T ss_pred cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh--------hhhhhhhhcccc
Confidence 21 245679999999999999999999999999999999999999987432110 001111111111
Q ss_pred CCCCch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1007 LPPPLG-EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1007 ~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
...+.. ........+.+++.+||+.||++|||++++++.|+
T Consensus 235 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred cCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 111100 00122356889999999999999999999999986
No 218
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=334.54 Aligned_cols=247 Identities=24% Similarity=0.367 Sum_probs=194.3
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
+.....||+|+||.||+|.+. +++.||+|++..... ......++..+..++||||+++++++...+..++||||++
T Consensus 31 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 107 (314)
T 3com_A 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD---LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCG 107 (314)
T ss_dssp EEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC---CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH---HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCC
Confidence 344557899999999999886 588899999865332 2334566777888999999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.+++... ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||.+..........
T Consensus 108 ~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (314)
T 3com_A 108 AGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKR 182 (314)
T ss_dssp TEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCB
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcccc
Confidence 99999998632 23588999999999999999999999 99999999999999999999999999998776544444
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
....||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ......... .++.......
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~ 250 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-----------RAIFMIPTN-PPPTFRKPEL 250 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----------HHHHHHHHS-CCCCCSSGGG
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-----------HHHHHHhcC-CCcccCCccc
Confidence 5667999999999999989999999999999999999999998643211 000111011 1111111122
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
....+.+++.+||+.||++|||+.++++
T Consensus 251 ~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 251 WSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp SCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 3356888999999999999999999975
No 219
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-36 Score=343.98 Aligned_cols=250 Identities=21% Similarity=0.287 Sum_probs=192.1
Q ss_pred cceeeecccccccEEEEEE----cCCCceeeEEeccCCC---CcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEE
Q 045493 779 GKMVLHGTGGCGTVYKAEL----TSGDTRAVKKLHSLPT---GEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFL 850 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~----~~~~~vavk~~~~~~~---~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~l 850 (1048)
.....||+|+||.||+|+. .+++.||||+++.... .........+++.+..+ +||||+++++++...+..++
T Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 136 (355)
T 1vzo_A 57 ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHL 136 (355)
T ss_dssp EEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEE
T ss_pred EEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEE
Confidence 3445689999999999988 3688999999865321 11122334566667777 59999999999999999999
Q ss_pred EEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccC
Q 045493 851 VYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK 930 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~ 930 (1048)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 137 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 137 ILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999997543 488999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC-CCcccccccccccccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCC
Q 045493 931 PDS-SNWSELAGTCGYIAPELAYT--MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRL 1007 (1048)
Q Consensus 931 ~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1048)
... ......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ................
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-------~~~~~~~~~~~~~~~~ 283 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE-------KNSQAEISRRILKSEP 283 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS-------CCCHHHHHHHHHHCCC
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc-------cchHHHHHHHHhccCC
Confidence 322 22334679999999999985 3478999999999999999999999863221 0111111222222221
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 045493 1008 PPPLGEVEEKLKSMIAVAFLCLDANPDCRP-----TMQKVCNL 1045 (1048)
Q Consensus 1008 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 1045 (1048)
+.+ ......+.+++.+||+.||++|| |++|+++.
T Consensus 284 ~~~----~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 284 PYP----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCC----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCC----cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 111 12234578899999999999999 99999864
No 220
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.1e-36 Score=330.76 Aligned_cols=242 Identities=18% Similarity=0.286 Sum_probs=188.0
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||+||+|.+. +++.||+|++....... .......++..+..+ +||||+++++++.+.+..++||||++
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 94 (289)
T 1x8b_A 15 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCN 94 (289)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecC
Confidence 3456899999999999887 78899999987543322 222233445555666 89999999999999999999999999
Q ss_pred CCCHHHHHhcccc-ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC-------------------C
Q 045493 857 RGSLATILSNEAT-AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE-------------------Y 916 (1048)
Q Consensus 857 ~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~-------------------~ 916 (1048)
+|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.+ .
T Consensus 95 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 95 GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp TCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------------CC
T ss_pred CCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 9999999975422 24589999999999999999999999 99999999999999844 4
Q ss_pred ceEEeccccccccCCCCCCccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccc
Q 045493 917 KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANM 995 (1048)
Q Consensus 917 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 995 (1048)
.+||+|||.+....... ...||+.|+|||++.+. .++.++||||+||++|||++|+.|+....
T Consensus 172 ~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------------ 235 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------------ 235 (289)
T ss_dssp CEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------------
T ss_pred EEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------------
Confidence 79999999998765432 24589999999999876 56789999999999999999987753211
Q ss_pred hhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 996 NIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
....+.....+.... .....+.+++.+||+.||++|||++|+++.
T Consensus 236 --~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 236 --QWHEIRQGRLPRIPQ---VLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp --HHHHHHTTCCCCCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --HHHHHHcCCCCCCCc---ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111222222222111 123457889999999999999999999863
No 221
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-36 Score=339.95 Aligned_cols=259 Identities=22% Similarity=0.299 Sum_probs=197.0
Q ss_pred ceeeecccccccEEEEEE-----cCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEee--eCCeEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAEL-----TSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS--HTQHLFLVY 852 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~--~~~~~~lv~ 852 (1048)
....||+|+||.||+|++ .+++.||||++...... ......++++.++.++||||+++++++. +....++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 105 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD-QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVM 105 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHH-HHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHH-HHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEE
Confidence 345689999999999984 35778999998654222 1223456677788899999999999886 456789999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 106 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 106 EYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred eecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 9999999999997532 3489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCC---ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCccccccc----CCCcccccchhhhhhhccC
Q 045493 933 SSN---WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL----SLPAPAANMNIVVNDLIDS 1005 (1048)
Q Consensus 933 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 1005 (1048)
... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...................
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 321 233468888999999999889999999999999999999999976432210 0000000111111111122
Q ss_pred CCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1006 RLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1006 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
...+.. ......+.+++.+||+.||++|||++|++++|+
T Consensus 261 ~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 261 QRLPAP---PACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp CCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCCC---CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 223456889999999999999999999999986
No 222
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=9.5e-37 Score=362.65 Aligned_cols=247 Identities=23% Similarity=0.364 Sum_probs=196.8
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCCH
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSL 860 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 860 (1048)
...||+|+||.||+|.+..+..||||+++..... .....++++.++.++||||+++++++.+ +..|+||||+++|+|
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL 348 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 348 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcH
Confidence 4468999999999999988888999998754322 2345667777889999999999999976 678999999999999
Q ss_pred HHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-Ccccc
Q 045493 861 ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS-NWSEL 939 (1048)
Q Consensus 861 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~~ 939 (1048)
.++++... ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .....
T Consensus 349 ~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 424 (535)
T 2h8h_A 349 LDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 424 (535)
T ss_dssp HHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCST
T ss_pred HHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCC
Confidence 99996432 23478999999999999999999999 999999999999999999999999999987643211 12234
Q ss_pred ccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHH
Q 045493 940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKL 1018 (1048)
Q Consensus 940 ~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1048)
.++..|+|||++.+..++.++|||||||++|||++ |+.||.... .......+......+.. ....
T Consensus 425 ~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~-----------~~~~~~~i~~~~~~~~~---~~~~ 490 (535)
T 2h8h_A 425 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----------NREVLDQVERGYRMPCP---PECP 490 (535)
T ss_dssp TSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC-----------HHHHHHHHHTTCCCCCC---TTCC
T ss_pred cCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHcCCCCCCC---CCCC
Confidence 56789999999999999999999999999999999 899976322 11222222222111111 1233
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1019 KSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1019 ~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
..+.+++.+||+.||++|||+++++++|++
T Consensus 491 ~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 520 (535)
T 2h8h_A 491 ESLHDLMCQCWRKEPEERPTFEYLQAFLED 520 (535)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 468889999999999999999999999874
No 223
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.9e-36 Score=346.53 Aligned_cols=257 Identities=21% Similarity=0.254 Sum_probs=188.7
Q ss_pred cceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC------eEEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ------HLFLVY 852 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~------~~~lv~ 852 (1048)
.....||+|+||+||+|++..+..+|+|++..... ...++++.++.++||||+++++++...+ ..++||
T Consensus 43 ~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 34557899999999999998777899999865322 2235778889999999999999985433 378999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC-CCCceEEeccccccccCC
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD-LEYKAHVSDFGTAKFLKP 931 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~-~~~~~kl~DfG~a~~~~~ 931 (1048)
||++++.+............+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||+|+....
T Consensus 118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 9998854444433223344588999999999999999999999 999999999999999 789999999999987654
Q ss_pred CCCCccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCcccccchhhhhh
Q 045493 932 DSSNWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAANMNIVVND 1001 (1048)
Q Consensus 932 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~~~~~~~~ 1001 (1048)
.. ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...+... +.+.... .......
T Consensus 195 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~-~~~~~~~ 272 (394)
T 4e7w_A 195 GE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ-IKTMNPN 272 (394)
T ss_dssp TC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH-HHHHCGG
T ss_pred CC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH-HHhhChh
Confidence 33 23456789999999998765 58999999999999999999999987533210 0000000 0000000
Q ss_pred hccCCCCCCch-hH-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1002 LIDSRLPPPLG-EV-----EEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1002 ~~~~~~~~~~~-~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
......+.... .. .....++.+++.+||+.||++|||+.|+++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 11111111000 00 1123578899999999999999999999863
No 224
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.4e-36 Score=337.00 Aligned_cols=247 Identities=22% Similarity=0.302 Sum_probs=189.5
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCC-------CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT-------GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-------~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv 851 (1048)
....||+|+||.||+|.+. +++.||||.+..... ........+++..++.++||||+++++++...+ .|+|
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEE
T ss_pred EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEE
Confidence 3456899999999999886 578899999865321 111223456777788999999999999987655 8999
Q ss_pred EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc---eEEeccccccc
Q 045493 852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK---AHVSDFGTAKF 928 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~---~kl~DfG~a~~ 928 (1048)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 93 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 9999999999998643 3488999999999999999999999 9999999999999987654 99999999987
Q ss_pred cCCCCCCccccccccccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccC
Q 045493 929 LKPDSSNWSELAGTCGYIAPELAY---TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDS 1005 (1048)
Q Consensus 929 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1048)
.... .......||+.|+|||++. ...++.++||||+||++|||++|+.||...... ......+...
T Consensus 167 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----------~~~~~~~~~~ 235 (322)
T 2ycf_A 167 LGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----------VSLKDQITSG 235 (322)
T ss_dssp CCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS----------SCHHHHHHHT
T ss_pred cccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH----------HHHHHHHHhC
Confidence 6432 2233457899999999974 467899999999999999999999998632210 0111112222
Q ss_pred CCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1006 RLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1006 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...............+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 222222222234567889999999999999999999985
No 225
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.7e-36 Score=330.65 Aligned_cols=243 Identities=24% Similarity=0.345 Sum_probs=185.8
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee-CCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH-TQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~g 858 (1048)
....||+|+||+||+|+.. ++.||||.+.... ......+++..++.++||||+++++++.+ .+..++||||+++|
T Consensus 25 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~ 100 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 100 (278)
T ss_dssp EEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred EEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCC
Confidence 4456899999999999886 8899999986532 22234556777888999999999998754 45789999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCccc
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 938 (1048)
+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 101 ~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---~~~ 173 (278)
T 1byg_A 101 SLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---QDT 173 (278)
T ss_dssp EHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred CHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc---ccC
Confidence 9999996532 22378899999999999999999999 9999999999999999999999999999865432 223
Q ss_pred cccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus 939 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
..+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+......... ...
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~---~~~ 239 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----------KDVVPRVEKGYKMDAP---DGC 239 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----------GGHHHHHTTTCCCCCC---TTC
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHhcCCCCCCc---ccC
Confidence 457889999999999899999999999999999998 9999863221 1111222121111111 122
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1018 LKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
...+.+++.+||+.||++|||+.|+++.|+
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 346888999999999999999999999886
No 226
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.4e-36 Score=340.28 Aligned_cols=246 Identities=20% Similarity=0.269 Sum_probs=169.0
Q ss_pred eeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee----CCeEEEEEEcc
Q 045493 781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH----TQHLFLVYEYL 855 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~ 855 (1048)
.++||+|+||+||+|.+. +++.||+|++.... ....+....+..++||||+++++++.. ....++||||+
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 108 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECM 108 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEecc
Confidence 446899999999999887 68899999985421 223344455677799999999999876 45589999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC---CCceEEeccccccccCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL---EYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~---~~~~kl~DfG~a~~~~~~ 932 (1048)
++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 109 ~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~ 184 (336)
T 3fhr_A 109 EGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184 (336)
T ss_dssp TTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred CCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence 9999999997543 23589999999999999999999999 9999999999999986 455999999999865432
Q ss_pred CCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493 933 SSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus 933 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.......... .....+.......+..
T Consensus 185 --~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 185 --ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-------GMKRRIRLGQYGFPNP 255 (336)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CCCTT
T ss_pred --ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-------hHHHhhhccccccCch
Confidence 2344678999999999988889999999999999999999999986433211000 0001111111111111
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
........+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11233456888999999999999999999987
No 227
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.9e-36 Score=329.92 Aligned_cols=241 Identities=23% Similarity=0.337 Sum_probs=193.5
Q ss_pred eeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
...||+|+||.||+|+.. +++.||+|++..... ........+++..++.++||||+++++++.+.+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 456899999999999887 567899998864321 11122345667777889999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 99 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~ 170 (284)
T 2vgo_A 99 GELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--RRR 170 (284)
T ss_dssp EEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS--CBC
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc--ccc
Confidence 99999997543 488999999999999999999999 9999999999999999999999999999765432 234
Q ss_pred ccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493 938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
...||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ......+.......+. ..
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----------~~~~~~~~~~~~~~~~----~~ 235 (284)
T 2vgo_A 171 TMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-----------TETHRRIVNVDLKFPP----FL 235 (284)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHTTCCCCCT----TS
T ss_pred cccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-----------hHHHHHHhccccCCCC----cC
Confidence 56799999999999998999999999999999999999999863221 1111222222221111 12
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1018 LKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 236 SDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 345788999999999999999999986
No 228
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.8e-37 Score=348.92 Aligned_cols=251 Identities=7% Similarity=-0.028 Sum_probs=172.2
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc--cchhhHHHHHHhhc--ccCceeeEe-------eEeeeC-
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI--GINQKGFVSEITEI--RHRNIVKFY-------GFCSHT- 845 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~~l~~l--~h~niv~~~-------~~~~~~- 845 (1048)
.....||+|+||+||+|++. +++.||+|++........ .....++...+..+ +||||++++ +++...
T Consensus 65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETT
T ss_pred eeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCC
Confidence 34557999999999999976 788999999977543221 11222332223333 699988755 444332
Q ss_pred ----------------CeEEEEEEccCCCCHHHHHhccccccccCHHHH------HHHHHHHHHHHHHHHhCCCCCeEee
Q 045493 846 ----------------QHLFLVYEYLERGSLATILSNEATAAELDWSKR------VNVIKGVANALSYMHHDCFPPILHR 903 (1048)
Q Consensus 846 ----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~~iiH~ 903 (1048)
...|+||||++ |+|.++++.... .+.+..+ ..++.|++.||+|||+. +|+||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHr 218 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHG 218 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccC
Confidence 34899999999 799999976422 2345555 67889999999999999 99999
Q ss_pred CCCCCCeEECCCCceEEeccccccccCCCCCCcccccccccccccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCcc
Q 045493 904 DISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT--MRANEKCDVFNFGVLVLEVIEGKHPGHF 981 (1048)
Q Consensus 904 Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~~ 981 (1048)
||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999986532 2224567799999999987 6799999999999999999999999875
Q ss_pred cccccCCCcccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 982 LSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
........... ............ ..........+.+++.+||+.||++|||++|+++
T Consensus 296 ~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 296 VTPGIKGSWKR----PSLRVPGTDSLA--FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CCTTCTTCCCB----CCTTSCCCCSCC--CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cCcccccchhh----hhhhhccccccc--hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 42211000000 000000001111 1111123456888999999999999999999975
No 229
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.9e-37 Score=350.93 Aligned_cols=238 Identities=14% Similarity=0.088 Sum_probs=178.4
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc--cchhhHHH---HHHhhcccCceeeEe-------eEeeeCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI--GINQKGFV---SEITEIRHRNIVKFY-------GFCSHTQ 846 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~---~~l~~l~h~niv~~~-------~~~~~~~ 846 (1048)
....||+|+||+||+|++. +++.||||++........ .....+++ +.++.++|||||+++ +++...+
T Consensus 77 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 77 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred EcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 3557999999999999874 689999999875422221 12223444 334556899999998 5555443
Q ss_pred -----------------eEEEEEEccCCCCHHHHHhcccc----ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCC
Q 045493 847 -----------------HLFLVYEYLERGSLATILSNEAT----AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDI 905 (1048)
Q Consensus 847 -----------------~~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Di 905 (1048)
..|+||||+ +|+|.+++...+. ...+++..+..++.||+.||+|||+. +|+||||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDi 232 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 232 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 279999999 6799999975422 12244688889999999999999999 9999999
Q ss_pred CCCCeEECCCCceEEeccccccccCCCCCCccccccccccccccccccC-----------CCCchhhHHHHHHHHHHHHh
Q 045493 906 SSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM-----------RANEKCDVFNFGVLVLEVIE 974 (1048)
Q Consensus 906 k~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dvws~Gvvl~ellt 974 (1048)
||+|||++.++.+||+|||+|+... ......+| +.|+|||++.+. .++.++||||+||++|||++
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt 308 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred CHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHH
Confidence 9999999999999999999998532 23345567 999999999887 89999999999999999999
Q ss_pred CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 975 GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 975 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
|+.||........ ...+.. ... .....+.+++.+||+.||++|||+.|+++
T Consensus 309 g~~Pf~~~~~~~~-----------~~~~~~-~~~-------~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 309 ADLPITKDAALGG-----------SEWIFR-SCK-------NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp SSCCC------CC-----------SGGGGS-SCC-------CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCCCcccccccc-----------hhhhhh-hcc-------CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999864332110 111111 111 11245788999999999999999999986
No 230
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-36 Score=341.28 Aligned_cols=257 Identities=18% Similarity=0.249 Sum_probs=185.6
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeC------CeEE
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHT------QHLF 849 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~------~~~~ 849 (1048)
+.....||+|+||.||+|.+. +++.||||++....... ......++++.++.++||||+++++++... ...|
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 106 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 106 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence 344557899999999999885 68899999986543222 122334566777888999999999999765 3469
Q ss_pred EEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccccccc
Q 045493 850 LVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL 929 (1048)
Q Consensus 850 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 929 (1048)
+||||+ +++|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 107 lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 107 LVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp EEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 999999 7899999865 2478999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCcccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCcccc---cch
Q 045493 930 KPDSSNWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAA---NMN 996 (1048)
Q Consensus 930 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~---~~~ 996 (1048)
.. .....++|+.|+|||++.+ ..++.++||||+||++|||++|+.||...+... +.+.... ...
T Consensus 179 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 179 DS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp CS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred cc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 43 2345678999999999877 679999999999999999999999987433210 0000000 000
Q ss_pred hhhhhh---ccCCCCCCc-hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 997 IVVNDL---IDSRLPPPL-GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 997 ~~~~~~---~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
...... ......... .........+.+++.+||+.||++|||++|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000 000000000 0011224568899999999999999999999873
No 231
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.9e-36 Score=334.88 Aligned_cols=252 Identities=23% Similarity=0.366 Sum_probs=178.1
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
.....||+|+||.||+|... +++.||+|++.............+++..++.++||||+++++++...+..++||||+++
T Consensus 18 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (303)
T 2vwi_A 18 ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97 (303)
T ss_dssp EEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTT
T ss_pred hhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccC
Confidence 34557899999999999875 67899999886543322222334455566778999999999999999999999999999
Q ss_pred CCHHHHHhcc-----ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 858 GSLATILSNE-----ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 858 g~L~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
|+|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 98 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp CBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred CchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 9999998642 1234589999999999999999999999 9999999999999999999999999999866433
Q ss_pred CC-----Ccccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCC
Q 045493 933 SS-----NWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSR 1006 (1048)
Q Consensus 933 ~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1048)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .........
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----------~~~~~~~~~ 243 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK-----------VLMLTLQND 243 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-----------HHHHHHTSS
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh-----------HHHHHhccC
Confidence 21 1234578999999999876 568999999999999999999999986432210 000000000
Q ss_pred CCCCc------hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1007 LPPPL------GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1007 ~~~~~------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.+... .........+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 244 PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00000 000112346788999999999999999999986
No 232
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.9e-37 Score=344.83 Aligned_cols=252 Identities=17% Similarity=0.170 Sum_probs=192.2
Q ss_pred cceeeecccccccEEEEEEcC---------CCceeeEEeccCCCCcccchhhHHHHHHhhcccCceee------------
Q 045493 779 GKMVLHGTGGCGTVYKAELTS---------GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVK------------ 837 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~~---------~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~------------ 837 (1048)
.....||+|+||.||+|+... ++.||+|.+... ....+++..+++++||||++
T Consensus 45 ~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 45 KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp EEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred EEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence 344568999999999998874 789999998643 23556777788889999887
Q ss_pred ---EeeEeee-CCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC
Q 045493 838 ---FYGFCSH-TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD 913 (1048)
Q Consensus 838 ---~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~ 913 (1048)
+++++.. .+..|+||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVD 193 (352)
T ss_dssp CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEE
T ss_pred ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEc
Confidence 6677765 77899999999 999999997542 34589999999999999999999999 999999999999999
Q ss_pred CCC--ceEEeccccccccCCCCC-------CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCccccc
Q 045493 914 LEY--KAHVSDFGTAKFLKPDSS-------NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSL 984 (1048)
Q Consensus 914 ~~~--~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~ 984 (1048)
.++ .+||+|||+++.+..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 273 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP 273 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence 998 999999999987653321 12345799999999999999999999999999999999999999874321
Q ss_pred ccCCCcccccchhhhhhhccCCC--CCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 985 LLSLPAPAANMNIVVNDLIDSRL--PPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
. ................ .............+.+++.+||+.||++|||+++++++|+
T Consensus 274 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 274 N------TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp C------HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred C------HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 0 0000011111111110 0000000112356888999999999999999999999986
No 233
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.7e-36 Score=327.71 Aligned_cols=243 Identities=22% Similarity=0.349 Sum_probs=186.0
Q ss_pred eeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
...||+|+||.||+|++. +++.||+|++..... .+......+++..++.++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 456899999999999987 788999999865321 11122345566777889999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...... ....
T Consensus 96 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~ 168 (276)
T 2h6d_A 96 GELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-EFLR 168 (276)
T ss_dssp CBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred CcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC-ccee
Confidence 99999997543 478999999999999999999999 9999999999999999999999999999876533 2234
Q ss_pred ccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 938 ELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
...||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||.... .......+.......+ ..
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~----~~ 233 (276)
T 2h6d_A 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH-----------VPTLFKKIRGGVFYIP----EY 233 (276)
T ss_dssp --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCC----TT
T ss_pred cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc-----------HHHHHHHhhcCcccCc----hh
Confidence 4578999999999988766 689999999999999999999986321 1111222222221111 11
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
....+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 234 LNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 23457889999999999999999999874
No 234
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-36 Score=335.59 Aligned_cols=256 Identities=23% Similarity=0.348 Sum_probs=189.2
Q ss_pred hhhhcccCCcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeee---
Q 045493 770 ELLSASTFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSH--- 844 (1048)
Q Consensus 770 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~--- 844 (1048)
++......+.....||+|+||.||+|++. +++.||+|++...... ......++..+.++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST--THHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc--HHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 33344444555667999999999999885 6888999998653322 23445566667777 79999999999976
Q ss_pred ---CCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEe
Q 045493 845 ---TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVS 921 (1048)
Q Consensus 845 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~ 921 (1048)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 468899999999999999997542 34588999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCccccccccccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccch
Q 045493 922 DFGTAKFLKPDSSNWSELAGTCGYIAPELAY-----TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMN 996 (1048)
Q Consensus 922 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 996 (1048)
|||++..............||+.|+|||++. +..++.++||||+||++|||++|+.||......
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----------- 240 (326)
T 2x7f_A 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----------- 240 (326)
T ss_dssp CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----------
T ss_pred eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-----------
Confidence 9999987654433444567999999999987 566899999999999999999999998633211
Q ss_pred hhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 997 IVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.....+.....+... .......+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 241 RALFLIPRNPAPRLK--SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHHHHHSCCCCCS--CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHhhcCccccCC--ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 011111111111100 0112346788999999999999999999986
No 235
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.2e-36 Score=337.03 Aligned_cols=259 Identities=22% Similarity=0.286 Sum_probs=190.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeee--------CCeEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSH--------TQHLF 849 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~--------~~~~~ 849 (1048)
....||+|+||+||+|+.. +++.||+|++....... ......++++.++.++||||+++++++.. .+..+
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 21 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEE
Confidence 4456899999999999985 78899999986544332 22234567777888999999999999876 45689
Q ss_pred EEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccccccc
Q 045493 850 LVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL 929 (1048)
Q Consensus 850 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 929 (1048)
+||||+++ ++.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 101 lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp EEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 99999986 777777543 23489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCC----CCCcccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccc---------cCCCcccc--
Q 045493 930 KPD----SSNWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLL---------LSLPAPAA-- 993 (1048)
Q Consensus 930 ~~~----~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~---------~~~~~~~~-- 993 (1048)
... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ........
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 254 (351)
T 3mi9_A 175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 254 (351)
T ss_dssp CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence 532 222345678999999999876 45799999999999999999999998743211 00000000
Q ss_pred --cchhhhhhhccCC-CCCCchhHH---HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 994 --NMNIVVNDLIDSR-LPPPLGEVE---EKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 994 --~~~~~~~~~~~~~-~~~~~~~~~---~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
............. ......... .....+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000000000000 000000000 01345889999999999999999999986
No 236
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8.8e-36 Score=328.73 Aligned_cols=247 Identities=19% Similarity=0.319 Sum_probs=194.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc--------cchhhHHHHHHhhcc-cCceeeEeeEeeeCCeEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI--------GINQKGFVSEITEIR-HRNIVKFYGFCSHTQHLF 849 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--------~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~ 849 (1048)
....||+|+||.||+|.+. +++.||+|++........ ......+++.++++. ||||+++++++...+..+
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 100 (298)
T 1phk_A 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF 100 (298)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEE
Confidence 3456899999999999886 678899999865432111 112234455566775 999999999999999999
Q ss_pred EEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccccccc
Q 045493 850 LVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL 929 (1048)
Q Consensus 850 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 929 (1048)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 101 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 101 LVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 999999999999999753 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccccccccccc------cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhc
Q 045493 930 KPDSSNWSELAGTCGYIAPELAY------TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLI 1003 (1048)
Q Consensus 930 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1048)
... .......||+.|+|||++. ...++.++||||+|+++|||++|+.||..... ......+.
T Consensus 175 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~~~ 242 (298)
T 1phk_A 175 DPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-----------MLMLRMIM 242 (298)
T ss_dssp CTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHH
T ss_pred CCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-----------HHHHHHHh
Confidence 543 2334567999999999885 45678999999999999999999999753221 11222222
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1004 DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1004 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.................+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 22222222222334456889999999999999999999985
No 237
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=348.62 Aligned_cols=194 Identities=20% Similarity=0.362 Sum_probs=149.2
Q ss_pred eeeecccccccEEEEEEc---CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEee--eCCeEEEEEEcc
Q 045493 781 MVLHGTGGCGTVYKAELT---SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS--HTQHLFLVYEYL 855 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~ 855 (1048)
...||+|+||+||+|++. +++.||+|++..... .....+++..++.++||||+++++++. .....|+||||+
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~ 102 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 102 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECC
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCC
Confidence 346899999999999876 578899999864322 224556788889999999999999995 467899999999
Q ss_pred CCCCHHHHHhccc------cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE----CCCCceEEecccc
Q 045493 856 ERGSLATILSNEA------TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL----DLEYKAHVSDFGT 925 (1048)
Q Consensus 856 ~~g~L~~~l~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll----~~~~~~kl~DfG~ 925 (1048)
++ +|.+++.... ....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 103 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 178 (405)
T 3rgf_A 103 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 178 (405)
T ss_dssp SE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred CC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence 75 8888875322 122488999999999999999999999 99999999999999 6778999999999
Q ss_pred ccccCCCC---CCccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCcc
Q 045493 926 AKFLKPDS---SNWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHF 981 (1048)
Q Consensus 926 a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~ 981 (1048)
|+.+.... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 179 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp CC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 98765332 223456799999999999874 589999999999999999999999964
No 238
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8.5e-36 Score=329.00 Aligned_cols=260 Identities=21% Similarity=0.285 Sum_probs=192.6
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|+.. +++.||+|++....... ......+++..++.++||||+++++++...+..++||||++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-
Confidence 3456899999999999886 68899999986543222 22334566777888999999999999999999999999998
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS 937 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 937 (1048)
|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...........
T Consensus 86 ~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (299)
T 2r3i_A 86 QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161 (299)
T ss_dssp EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTT
T ss_pred CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccC
Confidence 59999987543 23478899999999999999999999 999999999999999999999999999987654444445
Q ss_pred ccccccccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCcccccccC---------CCcccccchhhhhhhccCCC
Q 045493 938 ELAGTCGYIAPELAYTMR-ANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS---------LPAPAANMNIVVNDLIDSRL 1007 (1048)
Q Consensus 938 ~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 1007 (1048)
...+|+.|+|||++.+.. ++.++||||+||++|||++|+.||........ .+...............+..
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (299)
T 2r3i_A 162 HEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241 (299)
T ss_dssp SCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTS
T ss_pred cccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhh
Confidence 567899999999988765 79999999999999999999999864332100 00000000000000000011
Q ss_pred CC----Cc-hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1008 PP----PL-GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1008 ~~----~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
+. .. ........++.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 10 00 000112356789999999999999999999986
No 239
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=8.1e-36 Score=347.36 Aligned_cols=251 Identities=16% Similarity=0.202 Sum_probs=193.4
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhccc-CceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRH-RNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|++. +++.||||++....... ....+...+..++| ++|..+..++.+.+..++||||+ +
T Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~---~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g 86 (483)
T 3sv0_A 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP---QLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-G 86 (483)
T ss_dssp CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSC---CHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccH---HHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-C
Confidence 3456899999999999875 68889999876543322 34556667777776 56666777778888999999999 8
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE---CCCCceEEeccccccccCCCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL---DLEYKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~~~ 934 (1048)
++|.+++... ...+++..++.|+.||+.||+|||+. +||||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 87 ~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 87 PSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp CBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred CCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9999999643 23589999999999999999999999 99999999999999 5789999999999987764432
Q ss_pred C-------ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCC
Q 045493 935 N-------WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRL 1007 (1048)
Q Consensus 935 ~-------~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1048)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+..+.....
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~--------~~~~~~~~i~~~~~ 233 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG--------TKKQKYEKISEKKV 233 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS--------SHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch--------hHHHHHHHHhhccc
Confidence 2 22567999999999999999999999999999999999999998743210 11111111111111
Q ss_pred CCCch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1008 PPPLG-EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1008 ~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
..... .......++.+++..||+.||++||++++++++|+
T Consensus 234 ~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 234 ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11100 01122356889999999999999999999999886
No 240
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.2e-36 Score=336.90 Aligned_cols=247 Identities=24% Similarity=0.317 Sum_probs=174.9
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcc-cCceeeEeeEee--------eCCeE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-HRNIVKFYGFCS--------HTQHL 848 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-h~niv~~~~~~~--------~~~~~ 848 (1048)
.....||+|+||.||+|++. +++.||+|++..... ........++..+.++. ||||+++++++. .....
T Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE-EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSH-HHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEEEEccCCceEEEEEEECCCCcEEEEEEecCCch-HHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 34457899999999999975 688999998855322 11223345566667775 999999999983 34568
Q ss_pred EEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeeCCCCCCeEECCCCceEEeccccc
Q 045493 849 FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP--ILHRDISSKKVLLDLEYKAHVSDFGTA 926 (1048)
Q Consensus 849 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dik~~NIll~~~~~~kl~DfG~a 926 (1048)
++||||+. |+|.+++........+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 99999996 69999987644455689999999999999999999998 7 999999999999999999999999999
Q ss_pred cccCCCCCC------------cccccccccccccccc---ccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcc
Q 045493 927 KFLKPDSSN------------WSELAGTCGYIAPELA---YTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAP 991 (1048)
Q Consensus 927 ~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 991 (1048)
+........ .....||+.|+|||++ .+..++.++||||+||++|||++|+.||.......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----- 260 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----- 260 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-----
Confidence 876543221 1134689999999998 56678999999999999999999999986432210
Q ss_pred cccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 992 AANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
....... .+.. ......+.+++.+||+.||++|||++|+++.|+
T Consensus 261 ------~~~~~~~--~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 261 ------IVNGKYS--IPPH----DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp -----------CC--CCTT----CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred ------hhcCccc--CCcc----cccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0000000 0100 111123678899999999999999999999886
No 241
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5.4e-36 Score=339.93 Aligned_cols=261 Identities=19% Similarity=0.287 Sum_probs=192.3
Q ss_pred cCCcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeC-----CeEE
Q 045493 776 TFEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHT-----QHLF 849 (1048)
Q Consensus 776 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~-----~~~~ 849 (1048)
..+.....||+|+||.||+|.+. +++.||+|++.............++++.+..++||||+++++++... ...|
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 34455667999999999999876 67789999987543333223445667778889999999999998654 4689
Q ss_pred EEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccccccc
Q 045493 850 LVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL 929 (1048)
Q Consensus 850 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 929 (1048)
+||||+++ +|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 107 iv~e~~~~-~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 107 IVQDLMET-DLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEECCSE-EHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEcccCc-CHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 99999985 999998642 388999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC---Ccccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCC---------Ccccc---
Q 045493 930 KPDSS---NWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSL---------PAPAA--- 993 (1048)
Q Consensus 930 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~---------~~~~~--- 993 (1048)
..... .....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||......... +....
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 258 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHT
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 53322 2345689999999998654 45899999999999999999999998643321100 00000
Q ss_pred cchhhhhhhc---cCCCCCCch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 994 NMNIVVNDLI---DSRLPPPLG-EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 994 ~~~~~~~~~~---~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.......... ......+.. .......++.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 000000000 00122356889999999999999999999986
No 242
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=337.07 Aligned_cols=253 Identities=19% Similarity=0.283 Sum_probs=190.6
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEee----eCCeEEEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS----HTQHLFLVYE 853 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~----~~~~~~lv~e 853 (1048)
.....||+|+||.||+|+.. +++.||+|++..... .......+++..++.++||||+++++++. .....++|||
T Consensus 32 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 110 (317)
T 2buj_A 32 LFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQ-QDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110 (317)
T ss_dssp EEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSH-HHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEE
T ss_pred EEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCH-HHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEE
Confidence 34556899999999999884 788999998865322 22233455677778899999999999986 2447899999
Q ss_pred ccCCCCHHHHHhccc-cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 854 YLERGSLATILSNEA-TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
|+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp CCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred eCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 999999999996532 234589999999999999999999999 9999999999999999999999999998765321
Q ss_pred CCC---------ccccccccccccccccccCC---CCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhh
Q 045493 933 SSN---------WSELAGTCGYIAPELAYTMR---ANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVN 1000 (1048)
Q Consensus 933 ~~~---------~~~~~gt~~y~aPE~~~~~~---~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1000 (1048)
... .....||+.|+|||++.+.. ++.++||||+||++|||++|+.||....... ........
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~ 261 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG------DSVALAVQ 261 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT------SCHHHHHH
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc------chhhHHhh
Confidence 111 12345799999999987554 6899999999999999999999986322110 00000111
Q ss_pred hhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1001 DLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
. ....+.. ......+.+++.+||+.||++|||++|+++.|+
T Consensus 262 ~--~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 262 N--QLSIPQS----PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp C--C--CCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred c--cCCCCcc----ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 1 0111111 122346889999999999999999999999986
No 243
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.6e-36 Score=339.55 Aligned_cols=249 Identities=19% Similarity=0.274 Sum_probs=188.9
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHH-HHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGF-VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~-~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|+.. +++.||||++..............+ ...++.++||||+++++++.+.+..|+||||+++
T Consensus 55 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 134 (340)
T 3an0_A 55 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134 (340)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE
T ss_pred EeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC
Confidence 3456899999999999875 6888999998764333221112222 2225677899999999999999999999999986
Q ss_pred CCHHHHHhcc-ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 858 GSLATILSNE-ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 858 g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|.+++... .....+++..+..++.||+.||+|||+.. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 135 -~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-~~~ 210 (340)
T 3an0_A 135 -SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS-VAK 210 (340)
T ss_dssp -EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH-HHH
T ss_pred -cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecccc-ccc
Confidence 999988642 12345899999999999999999999742 8999999999999999999999999999876432 122
Q ss_pred cccccccccccccccc----cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493 937 SELAGTCGYIAPELAY----TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
....||+.|+|||++. ...++.++||||+||++|||++|+.||..... .............+....
T Consensus 211 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~----------~~~~~~~~~~~~~~~~~~ 280 (340)
T 3an0_A 211 TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT----------PFQQLKQVVEEPSPQLPA 280 (340)
T ss_dssp HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC----------HHHHHHHHHHSCCCCCCG
T ss_pred ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc----------hHHHHHHHhcCCCCCCCc
Confidence 3357999999999964 34689999999999999999999999863210 111122222222211111
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
......+.+++.+||+.||++|||+.|+++
T Consensus 281 --~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 281 --DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp --GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 123456889999999999999999999986
No 244
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7.1e-36 Score=339.58 Aligned_cols=257 Identities=18% Similarity=0.240 Sum_probs=183.6
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCC------eEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQ------HLFL 850 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~------~~~l 850 (1048)
.....||+|+||.||+|... +++.||||++....... ......+++..++.++||||+++++++...+ ..|+
T Consensus 28 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~l 107 (371)
T 2xrw_A 28 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI 107 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEE
T ss_pred eEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEE
Confidence 34556899999999999876 67889999987543222 1122345666778889999999999997654 7899
Q ss_pred EEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccC
Q 045493 851 VYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK 930 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~ 930 (1048)
||||+++ +|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 108 v~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 108 VMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred EEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 9999986 78888742 378899999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccC---------CCccc--ccchhhh
Q 045493 931 PDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS---------LPAPA--ANMNIVV 999 (1048)
Q Consensus 931 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~---------~~~~~--~~~~~~~ 999 (1048)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...+.... .+.+. .......
T Consensus 179 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 179 TS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred cc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 32 223456799999999999999999999999999999999999999875432100 00000 0000000
Q ss_pred hhh---------------ccC-CCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1000 NDL---------------IDS-RLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1000 ~~~---------------~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
... ... ..+............+.+++.+||+.||++|||++|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000 000 0111111223345678999999999999999999999863
No 245
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.9e-36 Score=331.15 Aligned_cols=249 Identities=19% Similarity=0.291 Sum_probs=178.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccc-hhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGI-NQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~-~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||+||+|++. +++.||+|++.......... ...++...++.++||||+++++++.+.+..++||||+++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 90 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 90 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc
Confidence 3456899999999999885 68889999986543322111 122233335677999999999999999999999999985
Q ss_pred CCHHHHHhcc-ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 858 GSLATILSNE-ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 858 g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|.+++... .....+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 91 -~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 166 (290)
T 3fme_A 91 -SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV-AK 166 (290)
T ss_dssp -EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred -chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccccc-cc
Confidence 888887542 22345899999999999999999999853 89999999999999999999999999998765432 23
Q ss_pred ccccccccccccccc----ccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493 937 SELAGTCGYIAPELA----YTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~----~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
....||+.|+|||++ .+..++.++||||+||++|||++|+.||.... ..............+...
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----------~~~~~~~~~~~~~~~~~~- 235 (290)
T 3fme_A 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG----------TPFQQLKQVVEEPSPQLP- 235 (290)
T ss_dssp ---CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS----------CHHHHHHHHHHSCCCCCC-
T ss_pred cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC----------chHHHHHHHhccCCCCcc-
Confidence 345799999999996 56678999999999999999999999986321 011111122222211111
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.......+.+++.+||+.||++|||++|+++
T Consensus 236 -~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 -ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1123346889999999999999999999986
No 246
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=9e-36 Score=344.59 Aligned_cols=194 Identities=17% Similarity=0.249 Sum_probs=161.0
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhc------ccCceeeEeeEeeeCCeEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI------RHRNIVKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l------~h~niv~~~~~~~~~~~~~lv 851 (1048)
.....||+|+||+||+|.+. +++.||||++..... .......+++.++.+ +|+||+++++++...+..++|
T Consensus 100 ~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv 177 (429)
T 3kvw_A 100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR--FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177 (429)
T ss_dssp EEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHH--HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred EEEEEcccCccEEEEEEEECCCCcEEEEEEECCccc--hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEE
Confidence 34557899999999999876 578899999864321 112223344444444 578999999999999999999
Q ss_pred EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc--eEEecccccccc
Q 045493 852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK--AHVSDFGTAKFL 929 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~--~kl~DfG~a~~~ 929 (1048)
|||+. |+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 178 ~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~ 252 (429)
T 3kvw_A 178 FELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252 (429)
T ss_dssp ECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence 99996 59999987543 23489999999999999999999999 9999999999999999987 999999999764
Q ss_pred CCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Q 045493 930 KPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFL 982 (1048)
Q Consensus 930 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 982 (1048)
.. .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 253 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 253 HQ---RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TC---CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC---cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 32 233467999999999999999999999999999999999999998643
No 247
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.4e-35 Score=324.98 Aligned_cols=246 Identities=22% Similarity=0.330 Sum_probs=195.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|+.. +++.||+|++....... ......+++..+++++||||+++++++.+.+..++||||+++
T Consensus 26 i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (287)
T 2wei_A 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105 (287)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCC
Confidence 3456899999999999886 68889999986543322 223345567777889999999999999999999999999999
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC---CceEEeccccccccCCCCC
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE---YKAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~---~~~kl~DfG~a~~~~~~~~ 934 (1048)
++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++.......
T Consensus 106 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~- 178 (287)
T 2wei_A 106 GELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT- 178 (287)
T ss_dssp CBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS-
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC-
Confidence 99999986533 488999999999999999999999 99999999999999764 479999999998765332
Q ss_pred CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493 935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
......||+.|+|||.+.+ .++.++||||+|+++|+|++|+.||..... ......+..+.........
T Consensus 179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 246 (287)
T 2wei_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-----------YDILKRVETGKYAFDLPQW 246 (287)
T ss_dssp SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHCCCCCCSGGG
T ss_pred ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHcCCCCCCchhh
Confidence 2334568999999998876 489999999999999999999999863221 1222223333333222222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
......+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 334456889999999999999999999987
No 248
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-35 Score=339.67 Aligned_cols=257 Identities=21% Similarity=0.218 Sum_probs=187.2
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee------------
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH------------ 844 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~------------ 844 (1048)
+.....||+|+||+||+|++. +++.||+|++..... ...+++..++.++||||+++++++..
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 334557899999999999875 788999999865322 22357888899999999999999843
Q ss_pred --------------------------CCeEEEEEEccCCCCHHHHHhcc-ccccccCHHHHHHHHHHHHHHHHHHHhCCC
Q 045493 845 --------------------------TQHLFLVYEYLERGSLATILSNE-ATAAELDWSKRVNVIKGVANALSYMHHDCF 897 (1048)
Q Consensus 845 --------------------------~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~ 897 (1048)
....++||||+++ +|.+.+... .....+++..+..++.|+++||+|||+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 160 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-- 160 (383)
T ss_dssp --------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 3348899999985 888777532 2234589999999999999999999999
Q ss_pred CCeEeeCCCCCCeEEC-CCCceEEeccccccccCCCCCCccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhC
Q 045493 898 PPILHRDISSKKVLLD-LEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEG 975 (1048)
Q Consensus 898 ~~iiH~Dik~~NIll~-~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg 975 (1048)
+|+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||++.+. .++.++||||+||++|||++|
T Consensus 161 -gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 238 (383)
T 3eb0_A 161 -GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238 (383)
T ss_dssp -TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred -cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhC
Confidence 999999999999998 68999999999998765433 33445789999999998765 489999999999999999999
Q ss_pred CCCCcccccccC---------CCcccccch--hhhhhhccCCCCCC-ch--hHHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 045493 976 KHPGHFLSLLLS---------LPAPAANMN--IVVNDLIDSRLPPP-LG--EVEEKLKSMIAVAFLCLDANPDCRPTMQK 1041 (1048)
Q Consensus 976 ~~p~~~~~~~~~---------~~~~~~~~~--~~~~~~~~~~~~~~-~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 1041 (1048)
+.||........ .+....... .......-+..... +. ........+.+++.+||+.||++|||+.|
T Consensus 239 ~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 239 KPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 999874332100 000000000 00000000000000 00 00112345889999999999999999999
Q ss_pred HHH
Q 045493 1042 VCN 1044 (1048)
Q Consensus 1042 vl~ 1044 (1048)
+++
T Consensus 319 ~l~ 321 (383)
T 3eb0_A 319 AMA 321 (383)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
No 249
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.8e-35 Score=330.85 Aligned_cols=263 Identities=20% Similarity=0.265 Sum_probs=191.2
Q ss_pred cCCcceeeecccccccEEEEEEc--CCCceeeEEeccCCCCc-ccchhhHHHHHHh---hcccCceeeEeeEee-----e
Q 045493 776 TFEGKMVLHGTGGCGTVYKAELT--SGDTRAVKKLHSLPTGE-IGINQKGFVSEIT---EIRHRNIVKFYGFCS-----H 844 (1048)
Q Consensus 776 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~---~l~h~niv~~~~~~~-----~ 844 (1048)
+.+.....||+|+||.||+|++. +++.||+|++....... ......+++..++ .++||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 34445567999999999999983 57789999886543222 1223334444444 448999999999987 5
Q ss_pred CCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccc
Q 045493 845 TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFG 924 (1048)
Q Consensus 845 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG 924 (1048)
....++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCc
Confidence 567899999998 59999997543 23488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCcccccc
Q 045493 925 TAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAANM 995 (1048)
Q Consensus 925 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~~ 995 (1048)
+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..+....+.
T Consensus 166 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 166 LARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp SCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred ccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence 99865422 22344678999999999999999999999999999999999999987433210 000000000
Q ss_pred hh--hhhhhccC-CCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 996 NI--VVNDLIDS-RLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 996 ~~--~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.. ........ ...............+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 00000000 000000011123346788999999999999999999985
No 250
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-36 Score=334.94 Aligned_cols=260 Identities=22% Similarity=0.332 Sum_probs=195.0
Q ss_pred ceeeecccccccEEEEEE-----cCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC--eEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAEL-----TSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ--HLFLVY 852 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 852 (1048)
....||+|+||.||+|++ .+++.||+|++..... .......+++..++.++||||+++++++...+ ..++||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 123 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 123 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCS-HHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEE
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEE
Confidence 345689999999999984 3578899999865322 22233456677788899999999999986543 689999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 124 EYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp CCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred ECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 9999999999997542 3488999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCC---ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCccccc-c---cCCCcc-cccchhhhhhhcc
Q 045493 933 SSN---WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSL-L---LSLPAP-AANMNIVVNDLID 1004 (1048)
Q Consensus 933 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~-~---~~~~~~-~~~~~~~~~~~~~ 1004 (1048)
... .....++..|+|||++.+..++.++||||+||++|||++|+.||..... . ...... ..........+..
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence 322 1234577889999999988899999999999999999999998753211 0 000000 0000011111111
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1005 SRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1005 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
....+.. .....++.+++.+||+.||++|||+.|+++.|++
T Consensus 279 ~~~~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 279 NGRLPRP---DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319 (326)
T ss_dssp TCCCCCC---TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCC---CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1111111 1233568889999999999999999999999863
No 251
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5e-36 Score=329.51 Aligned_cols=249 Identities=22% Similarity=0.324 Sum_probs=183.8
Q ss_pred ceeeecccccccEEEEEEcC--CC--ceeeEEeccCCCC--cccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELTS--GD--TRAVKKLHSLPTG--EIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYE 853 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~--~~--~vavk~~~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 853 (1048)
....||+|+||+||+|++.. ++ .||+|+++..... +......++++.++.++||||+++++++.... .++|||
T Consensus 22 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEe
Confidence 34568999999999998642 23 5788888654322 11223345666678889999999999998765 889999
Q ss_pred ccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC
Q 045493 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS 933 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 933 (1048)
|+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 175 (291)
T 1u46_A 101 LAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175 (291)
T ss_dssp CCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred cccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccccc
Confidence 99999999999753 23488999999999999999999999 99999999999999999999999999998775443
Q ss_pred CC---ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCC
Q 045493 934 SN---WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPP 1009 (1048)
Q Consensus 934 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1048)
.. .....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+.......
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----------~~~~~~~~~~~~~~ 244 (291)
T 1u46_A 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----------SQILHKIDKEGERL 244 (291)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----------HHHHHHHHTSCCCC
T ss_pred cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----------HHHHHHHHccCCCC
Confidence 32 223457889999999998889999999999999999999 9999863221 11222222211111
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1010 PLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1010 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
+. .......+.+++.+||+.||++|||+++++++|+
T Consensus 245 ~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 245 PR--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC--CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 11 1123456888999999999999999999999986
No 252
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.2e-36 Score=332.44 Aligned_cols=248 Identities=22% Similarity=0.320 Sum_probs=188.4
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
....||+|+||.||+|++. ..+|+|++....... ......+++..++.++||||+++++++.+.+..++||||++++
T Consensus 37 ~~~~lg~G~~g~V~~~~~~--~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCCBCCCSSSSEEEEEEES--SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EeeEeccCCceEEEEEEEc--CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 3456899999999999886 358999887543222 2233445666778889999999999999999999999999999
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC-----C
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD-----S 933 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~-----~ 933 (1048)
+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++..... .
T Consensus 115 ~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~ 188 (319)
T 2y4i_B 115 TLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE 188 (319)
T ss_dssp EHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----------C
T ss_pred cHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccccccc
Confidence 999999653 23588899999999999999999999 999999999999998 689999999998765321 1
Q ss_pred CCcccccccccccccccccc---------CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhcc
Q 045493 934 SNWSELAGTCGYIAPELAYT---------MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLID 1004 (1048)
Q Consensus 934 ~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1048)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+..
T Consensus 189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----------~~~~~~~~~ 257 (319)
T 2y4i_B 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA-----------EAIIWQMGT 257 (319)
T ss_dssp CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH-----------HHHHHHHHT
T ss_pred cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHhcc
Confidence 22334568999999999874 4578999999999999999999999863221 111111111
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1005 SRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1005 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
...+.... ......+.+++.+||+.||++|||+++++++|++
T Consensus 258 ~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 299 (319)
T 2y4i_B 258 GMKPNLSQ--IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299 (319)
T ss_dssp TCCCCCCC--SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTT
T ss_pred CCCCCCCc--CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 11111110 0122357889999999999999999999999874
No 253
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.2e-36 Score=338.45 Aligned_cols=248 Identities=21% Similarity=0.306 Sum_probs=194.2
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCccc----------------chhhHHHHHHhhcccCceeeEeeEee
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIG----------------INQKGFVSEITEIRHRNIVKFYGFCS 843 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~----------------~~~~~~~~~l~~l~h~niv~~~~~~~ 843 (1048)
....||+|+||.||+|+. +++.||+|++......... ....+++..++.++||||+++++++.
T Consensus 35 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 113 (348)
T 2pml_X 35 IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEE
T ss_pred EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 345689999999999999 7999999998654322111 34456677788899999999999999
Q ss_pred eCCeEEEEEEccCCCCHHHH------HhccccccccCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeEECCCC
Q 045493 844 HTQHLFLVYEYLERGSLATI------LSNEATAAELDWSKRVNVIKGVANALSYMHH-DCFPPILHRDISSKKVLLDLEY 916 (1048)
Q Consensus 844 ~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~Dik~~NIll~~~~ 916 (1048)
+.+..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~~ 189 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKNG 189 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTTS
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCCC
Confidence 99999999999999999998 5431 23558999999999999999999999 7 999999999999999999
Q ss_pred ceEEeccccccccCCCCCCccccccccccccccccccC-CCCc-hhhHHHHHHHHHHHHhCCCCCcccccccCCCccccc
Q 045493 917 KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTM-RANE-KCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAAN 994 (1048)
Q Consensus 917 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 994 (1048)
.+||+|||.+...... ......||+.|+|||++.+. .++. ++||||+||++|||++|+.||......
T Consensus 190 ~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------- 258 (348)
T 2pml_X 190 RVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--------- 258 (348)
T ss_dssp CEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS---------
T ss_pred cEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH---------
Confidence 9999999999876433 33456799999999999887 5665 999999999999999999998643220
Q ss_pred chhhhhhhccCCCCCCc---------------hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 995 MNIVVNDLIDSRLPPPL---------------GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 995 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
......+.......+. .........+.+++.+||+.||++|||++|+++
T Consensus 259 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 -VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp -HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111111111000 000223456889999999999999999999986
No 254
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.6e-36 Score=331.65 Aligned_cols=249 Identities=23% Similarity=0.321 Sum_probs=188.3
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
+.....||+|+||.||+|++. +++.+|+|++....... ......++..++.++||||+++++++...+..++||||++
T Consensus 21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 99 (302)
T 2j7t_A 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE-LEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP 99 (302)
T ss_dssp EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CC-HHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCT
T ss_pred eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHH-HHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCC
Confidence 344556899999999999987 57888999886543222 2234456677788899999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 100 ~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (302)
T 2j7t_A 100 GGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 174 (302)
T ss_dssp TEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-
T ss_pred CCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccccccc
Confidence 99999998653 23488999999999999999999999 99999999999999999999999999976432222222
Q ss_pred ccccccccccccccc-----ccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493 937 SELAGTCGYIAPELA-----YTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~-----~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
....||+.|+|||++ .+..++.++||||+|+++|||++|+.||..... ............+..
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~- 242 (302)
T 2j7t_A 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----------MRVLLKIAKSDPPTL- 242 (302)
T ss_dssp ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHHHSCCCCC-
T ss_pred ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-----------HHHHHHHhccCCccc-
Confidence 345789999999998 366789999999999999999999999864321 111111111111111
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1012 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.........+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111223346888999999999999999999975
No 255
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.4e-35 Score=336.55 Aligned_cols=259 Identities=20% Similarity=0.206 Sum_probs=177.2
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCe-------EEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQH-------LFL 850 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~-------~~l 850 (1048)
.....||+|+||+||+|++. +++.||||++..... ......++++.+..++||||+++++++...+. .++
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~l 103 (360)
T 3e3p_A 26 QVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV 103 (360)
T ss_dssp EEC----------CEEEEETTTCCEEEEEEEECCTT--CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEE
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc--ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEE
Confidence 33456899999999999986 688999998865322 22344556666788899999999999865333 789
Q ss_pred EEEccCCCCHHHHHhc-cccccccCHHHHHHHHHHHHHHHHHHH--hCCCCCeEeeCCCCCCeEECC-CCceEEeccccc
Q 045493 851 VYEYLERGSLATILSN-EATAAELDWSKRVNVIKGVANALSYMH--HDCFPPILHRDISSKKVLLDL-EYKAHVSDFGTA 926 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~iiH~Dik~~NIll~~-~~~~kl~DfG~a 926 (1048)
||||+++ ++.+.+.. ......+++..+..++.|++.|+.||| +. +|+||||||+||+++. ++.+||+|||++
T Consensus 104 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a 179 (360)
T 3e3p_A 104 VMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGSA 179 (360)
T ss_dssp EEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred Eeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCCc
Confidence 9999987 55444432 223445788999999999999999999 77 9999999999999997 899999999999
Q ss_pred cccCCCCCCccccccccccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCcccccccCCCccc----ccchhhhhh
Q 045493 927 KFLKPDSSNWSELAGTCGYIAPELAYTMR-ANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPA----ANMNIVVND 1001 (1048)
Q Consensus 927 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~ 1001 (1048)
+...... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||............. .........
T Consensus 180 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (360)
T 3e3p_A 180 KKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK 258 (360)
T ss_dssp BCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred eecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHh
Confidence 8765433 234557899999999987654 8999999999999999999999986432210000000 000000000
Q ss_pred hccC--------CCCCCchh-----HHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1002 LIDS--------RLPPPLGE-----VEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1002 ~~~~--------~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.... ....+... .......+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000 00000000 0113457889999999999999999999986
No 256
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.3e-35 Score=342.52 Aligned_cols=256 Identities=23% Similarity=0.267 Sum_probs=186.2
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeC------CeEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHT------QHLFLV 851 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~------~~~~lv 851 (1048)
.....||+|+||.||+|++. +++.||||++..... ...++++.++.++|||||+++++|... ...++|
T Consensus 57 ~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 34557999999999999986 588999999865321 234577888999999999999988432 236799
Q ss_pred EEccCCCCHHHHHhcc-ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC-CceEEecccccccc
Q 045493 852 YEYLERGSLATILSNE-ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE-YKAHVSDFGTAKFL 929 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~-~~~kl~DfG~a~~~ 929 (1048)
|||+++ ++.+.+... .....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.+
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999987 666665432 2334589999999999999999999999 99999999999999965 67899999999876
Q ss_pred CCCCCCccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCccc----ccchhhhhhh--
Q 045493 930 KPDSSNWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPA----ANMNIVVNDL-- 1002 (1048)
Q Consensus 930 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~-- 1002 (1048)
.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||............. ......+..+
T Consensus 208 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~ 286 (420)
T 1j1b_A 208 VRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286 (420)
T ss_dssp CTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCS
T ss_pred ccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 5432 23446789999999998764 78999999999999999999999987433210000000 0000000000
Q ss_pred --ccCCCCCCc-hhH-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1003 --IDSRLPPPL-GEV-----EEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1003 --~~~~~~~~~-~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
....++... ..+ .....++.+++.+||+.||++|||+.|+++
T Consensus 287 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000111000 000 112356889999999999999999999985
No 257
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.6e-35 Score=331.88 Aligned_cols=251 Identities=18% Similarity=0.220 Sum_probs=188.6
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcc-cCceeeEeeEeee--CCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-HRNIVKFYGFCSH--TQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~e~~ 855 (1048)
....||+|+||+||+|++. +++.||+|++.... .....+++..++.++ ||||+++++++.+ ....++||||+
T Consensus 40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~ 115 (330)
T 3nsz_A 40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV 115 (330)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred EEEEecccCCeEEEEEEECCCCcEEEEEEecccc----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEecc
Confidence 3457899999999999875 68899999986422 233556677778886 9999999999987 66789999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC-ceEEeccccccccCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSS 934 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~-~~kl~DfG~a~~~~~~~~ 934 (1048)
++++|.++++. +++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++......
T Consensus 116 ~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~- 185 (330)
T 3nsz_A 116 NNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ- 185 (330)
T ss_dssp CCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC-
T ss_pred CchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC-
Confidence 99999999843 78889999999999999999999 999999999999999776 89999999998765433
Q ss_pred Ccccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCC--------Cc---------ccccch
Q 045493 935 NWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSL--------PA---------PAANMN 996 (1048)
Q Consensus 935 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~--------~~---------~~~~~~ 996 (1048)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......... .. ......
T Consensus 186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 265 (330)
T 3nsz_A 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265 (330)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccc
Confidence 3345678999999999877 66899999999999999999999998421110000 00 000000
Q ss_pred hhhhhhccCCCCCC------chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 997 IVVNDLIDSRLPPP------LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 997 ~~~~~~~~~~~~~~------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
....+......... ..........+.+++.+||+.||++|||++|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000000000 0001113457889999999999999999999987
No 258
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=9.9e-36 Score=336.90 Aligned_cols=258 Identities=19% Similarity=0.278 Sum_probs=189.6
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeC-----CeEEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHT-----QHLFLVY 852 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~ 852 (1048)
.....||+|+||.||+|++. +++.||||++.............+++..++.++||||+++++++... ...++||
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 93 (353)
T 2b9h_A 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQ 93 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEE
T ss_pred EEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEE
Confidence 34456899999999999886 67889999986543322223344667777889999999999988654 6789999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 94 ELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp CCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred eccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 9997 599999864 2488999999999999999999999 9999999999999999999999999999876532
Q ss_pred CC----------Ccccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCccc
Q 045493 933 SS----------NWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPA 992 (1048)
Q Consensus 933 ~~----------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~ 992 (1048)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+... +.+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 21 1223578999999998764 678999999999999999999999987533110 000000
Q ss_pred ----ccchhhhhhhccC--CCCCC-c-hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 993 ----ANMNIVVNDLIDS--RLPPP-L-GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 993 ----~~~~~~~~~~~~~--~~~~~-~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
........+.... ..+.. . .........+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000111110 00000 0 001123456889999999999999999999986
No 259
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.5e-35 Score=343.57 Aligned_cols=247 Identities=22% Similarity=0.300 Sum_probs=179.3
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
...+||+|+||+||.+...+++.||||++.... ......++..+.++ +||||+++++++.+.+..|+||||+. |
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 345689999999987777789999999986432 12234556666655 89999999999999999999999996 5
Q ss_pred CHHHHHhccccccc----cCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC-------------CceEEe
Q 045493 859 SLATILSNEATAAE----LDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE-------------YKAHVS 921 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~----l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~-------------~~~kl~ 921 (1048)
+|.+++........ .++..+..++.||+.||+|||+. +|+||||||+||+++.+ +.+||+
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 99999975432211 13345678999999999999999 99999999999999754 489999
Q ss_pred ccccccccCCCCCC----cccccccccccccccccc-------CCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCC
Q 045493 922 DFGTAKFLKPDSSN----WSELAGTCGYIAPELAYT-------MRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLP 989 (1048)
Q Consensus 922 DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~-------~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~ 989 (1048)
|||+++........ ....+||+.|+|||++.+ ..++.++||||+||++|||++ |+.||......
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---- 246 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR---- 246 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH----
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh----
Confidence 99999877544322 234579999999999875 568999999999999999999 99998632110
Q ss_pred cccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 990 APAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
............... .........++.+++.+||+.||++|||+.|+++
T Consensus 247 -----~~~i~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 -----ESNIIRGIFSLDEMK-CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -----HHHHHHTCCCCCCCT-TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----HHHHhcCCCCccccc-ccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 011111111111000 1112345567889999999999999999999986
No 260
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.6e-35 Score=336.18 Aligned_cols=265 Identities=17% Similarity=0.202 Sum_probs=187.1
Q ss_pred cccCCcceeeecccccccEEEEEEcCCCceeeEEeccCCCCccc----------chhhHHHHHHhhcccCceeeEeeEee
Q 045493 774 ASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIG----------INQKGFVSEITEIRHRNIVKFYGFCS 843 (1048)
Q Consensus 774 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~----------~~~~~~~~~l~~l~h~niv~~~~~~~ 843 (1048)
....+.....||+|+||.||+|...+++.||||++......... ....++++.++.++||||+++++++.
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp TTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred hccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 33445556679999999999999988999999998664333211 23355667778899999999999984
Q ss_pred e-----CCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCce
Q 045493 844 H-----TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA 918 (1048)
Q Consensus 844 ~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~ 918 (1048)
. ....|+||||++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~ 173 (362)
T 3pg1_A 100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDI 173 (362)
T ss_dssp ECCTTTCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred eccCCCcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCE
Confidence 3 346899999998 5888888643 33589999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCCCcccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccC---------C
Q 045493 919 HVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS---------L 988 (1048)
Q Consensus 919 kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~---------~ 988 (1048)
||+|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ .
T Consensus 174 kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 252 (362)
T 3pg1_A 174 TICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252 (362)
T ss_dssp EECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence 99999999854432 23345678999999999877 6789999999999999999999999864321100 0
Q ss_pred Ccccc---cchhhhhhhccCCCCC-Cchh----HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 989 PAPAA---NMNIVVNDLIDSRLPP-PLGE----VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 989 ~~~~~---~~~~~~~~~~~~~~~~-~~~~----~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
+.... .......+........ +... .......+.+++.+||+.||++|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 00000 0000001111111100 0000 11223568899999999999999999999863
No 261
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.9e-35 Score=326.90 Aligned_cols=246 Identities=25% Similarity=0.386 Sum_probs=181.8
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee-------------C
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH-------------T 845 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~-------------~ 845 (1048)
....||+|+||.||+|+.. +++.||+|++.... .......+++..++.++||||+++++++.+ .
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (303)
T 1zy4_A 10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKK 87 (303)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CE
T ss_pred hhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH--HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccC
Confidence 3456899999999999875 68899999985421 112234456677788899999999998854 4
Q ss_pred CeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccc
Q 045493 846 QHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGT 925 (1048)
Q Consensus 846 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~ 925 (1048)
+..|+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 88 STLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred CceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCcc
Confidence 57899999999999999997532 3477889999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC--------------CCccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCc
Q 045493 926 AKFLKPDS--------------SNWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPA 990 (1048)
Q Consensus 926 a~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~ 990 (1048)
++...... .......||+.|+|||++.+. .++.++||||+||++|||++ ||....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~------- 232 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM------- 232 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-------
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-------
Confidence 98764321 122345689999999998864 68999999999999999998 433110
Q ss_pred ccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 991 PAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
........+.......+..........+.+++.+||+.||++|||++|+++.
T Consensus 233 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 233 ---ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp ---HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 0111112221111111111112333457889999999999999999999873
No 262
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.8e-35 Score=356.96 Aligned_cols=248 Identities=21% Similarity=0.294 Sum_probs=190.6
Q ss_pred ceeeecccccccEEEEEEcC----CCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELTS----GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
....||+|+||.||+|.+.. +..||+|++.............+++..++.++||||+++++++.+ +..|+||||+
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~lv~E~~ 472 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 472 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEEEEEcC
Confidence 34568999999999998753 345788887654333322334556667788899999999999854 5689999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 473 ~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 547 (656)
T 2j0j_A 473 TLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 547 (656)
T ss_dssp TTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----
T ss_pred CCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCcce
Confidence 999999999753 23488999999999999999999999 9999999999999999999999999999876543222
Q ss_pred -ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493 936 -WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus 936 -~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
.....+|+.|+|||++.+..++.++||||+||++|||++ |+.||..... ......+......+..
T Consensus 548 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-----------~~~~~~i~~~~~~~~~-- 614 (656)
T 2j0j_A 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----------NDVIGRIENGERLPMP-- 614 (656)
T ss_dssp ------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----------HHHHHHHHHTCCCCCC--
T ss_pred eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH-----------HHHHHHHHcCCCCCCC--
Confidence 233457789999999999999999999999999999997 9999863221 1122222222211111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493 1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus 1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
......+.+++.+||+.||++|||+.|+++.|+
T Consensus 615 -~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 615 -PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 122346888999999999999999999999886
No 263
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.7e-36 Score=339.39 Aligned_cols=257 Identities=19% Similarity=0.259 Sum_probs=173.2
Q ss_pred CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeC------CeEE
Q 045493 778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHT------QHLF 849 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~------~~~~ 849 (1048)
+.....||+|+||.||+|.+. +++.||||++....... ......++++.++.++||||+++++++... ...|
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~ 110 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence 344567899999999999875 68889999986543221 122334566777888999999999998653 5689
Q ss_pred EEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccccccc
Q 045493 850 LVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL 929 (1048)
Q Consensus 850 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 929 (1048)
+|+|++ +++|.++++. ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 111 lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 111 LVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp EEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred EEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 999999 6799998864 3489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCcccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCccc---ccch
Q 045493 930 KPDSSNWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPA---ANMN 996 (1048)
Q Consensus 930 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~---~~~~ 996 (1048)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+... +.+... ....
T Consensus 183 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 183 AD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCC
T ss_pred cc---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 43 2345679999999999877 678999999999999999999999986543210 000000 0000
Q ss_pred hhhhhhccC--CCCC-Cch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 997 IVVNDLIDS--RLPP-PLG-EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 997 ~~~~~~~~~--~~~~-~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
......... ..+. ... ........+.+++.+||+.||++|||++|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000011000 0010 000 001123568899999999999999999999863
No 264
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-35 Score=338.90 Aligned_cols=245 Identities=22% Similarity=0.263 Sum_probs=180.3
Q ss_pred CcceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 778 EGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 778 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
+....+||+|+||+||.....+++.||||++..... ....++++.++.+ +|||||++++++.+....|+||||++
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 344567999999997766666799999999865322 2245667777777 79999999999999999999999997
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC-----CceEEeccccccccCC
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE-----YKAHVSDFGTAKFLKP 931 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~-----~~~kl~DfG~a~~~~~ 931 (1048)
|+|.+++..... ...+..+..++.||+.||+|||+. +|+||||||+||+++.+ ..+||+|||+|+....
T Consensus 102 -g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 102 -ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp -EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred -CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 599999975432 244556789999999999999999 99999999999999532 3588999999987654
Q ss_pred CC---CCccccccccccccccccc---cCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhcc
Q 045493 932 DS---SNWSELAGTCGYIAPELAY---TMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLID 1004 (1048)
Q Consensus 932 ~~---~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1048)
.. ......+||+.|+|||++. ...++.++||||+||++|||++ |+.||..... ........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~------------~~~~~~~~ 243 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ------------RQANILLG 243 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT------------HHHHHHTT
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH------------HHHHHHhc
Confidence 32 2234567999999999987 4567889999999999999999 8999752210 00111111
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1005 SRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1005 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
................+.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 244 ACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1111111111233445788999999999999999999985
No 265
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.7e-35 Score=327.14 Aligned_cols=248 Identities=19% Similarity=0.305 Sum_probs=185.3
Q ss_pred CCcceeeecccccccEEEEEEcCCCceeeEEeccCCCCc-ccchhhHHHHHHhhcc--cCceeeEeeEeeeCCeEEEEEE
Q 045493 777 FEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIR--HRNIVKFYGFCSHTQHLFLVYE 853 (1048)
Q Consensus 777 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e 853 (1048)
.+.....||+|+||.||+|...+++.||||++....... ......+++..+..++ ||||+++++++...+..++|||
T Consensus 29 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e 108 (313)
T 3cek_A 29 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 108 (313)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe
Confidence 344456799999999999999889999999986543322 1223345566667776 5999999999999999999999
Q ss_pred ccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC
Q 045493 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS 933 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 933 (1048)
+.+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++......
T Consensus 109 -~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~ 180 (313)
T 3cek_A 109 -CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 180 (313)
T ss_dssp -CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC-----
T ss_pred -cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeeccccccccCcc
Confidence 56789999997543 478899999999999999999999 999999999999996 4899999999998765433
Q ss_pred C--Ccccccccccccccccccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhh
Q 045493 934 S--NWSELAGTCGYIAPELAYT-----------MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVN 1000 (1048)
Q Consensus 934 ~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1000 (1048)
. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----------~~~~~~ 250 (313)
T 3cek_A 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----------QISKLH 250 (313)
T ss_dssp ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS----------HHHHHH
T ss_pred ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH----------HHHHHH
Confidence 2 1234578999999999875 4688999999999999999999999863211 111122
Q ss_pred hhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1001 DLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...++....... ......+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 251 AIIDPNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHCTTSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhcccccCCc--ccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 222222111110 011245788999999999999999999986
No 266
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5.8e-35 Score=333.63 Aligned_cols=196 Identities=21% Similarity=0.229 Sum_probs=158.1
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcc-c-----CceeeEeeEeeeCCeEEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-H-----RNIVKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-h-----~niv~~~~~~~~~~~~~lv 851 (1048)
.....||+|+||+||+|.+. +++.||||++.... ........+++.++.++ | ++|+++++++...+..++|
T Consensus 57 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv 134 (382)
T 2vx3_A 57 EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLV 134 (382)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEE
T ss_pred EEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEE
Confidence 34457899999999999876 57789999986421 11122233444444443 3 3599999999999999999
Q ss_pred EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC--CCCceEEecccccccc
Q 045493 852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD--LEYKAHVSDFGTAKFL 929 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~--~~~~~kl~DfG~a~~~ 929 (1048)
|||+++ +|.+++.... ...+++..+..++.|++.||.|||+.. .+|+||||||+||+++ .++.+||+|||+++..
T Consensus 135 ~e~~~~-~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~ 211 (382)
T 2vx3_A 135 FEMLSY-NLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211 (382)
T ss_dssp EECCCC-BHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EecCCC-CHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence 999965 9999997543 234899999999999999999999521 2899999999999995 4688999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Q 045493 930 KPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFL 982 (1048)
Q Consensus 930 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 982 (1048)
... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 212 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 212 GQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 432 34567999999999999999999999999999999999999999743
No 267
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.8e-35 Score=322.78 Aligned_cols=245 Identities=20% Similarity=0.279 Sum_probs=188.4
Q ss_pred eeeecccccccEEEEEEc-CCCceeeEEeccCCCC---cccchhhHHHHHHhhcccCceeeEeeEe--eeCCeEEEEEEc
Q 045493 781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG---EIGINQKGFVSEITEIRHRNIVKFYGFC--SHTQHLFLVYEY 854 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~--~~~~~~~lv~e~ 854 (1048)
...||+|+||.||+|... +++.||+|++...... .......+++..++.++||||+++++++ .+....++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 456899999999999885 6788999998653211 1223345667777888999999999998 445688999999
Q ss_pred cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC-
Q 045493 855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS- 933 (1048)
Q Consensus 855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~- 933 (1048)
+++| +.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 164 (305)
T 2wtk_C 90 CVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164 (305)
T ss_dssp CSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS
T ss_pred ccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccCcccc
Confidence 9986 777775432 34589999999999999999999999 99999999999999999999999999998765322
Q ss_pred -CCccccccccccccccccccCCC--CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCC
Q 045493 934 -SNWSELAGTCGYIAPELAYTMRA--NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP 1010 (1048)
Q Consensus 934 -~~~~~~~gt~~y~aPE~~~~~~~--~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1048)
.......||+.|+|||++.+... +.++||||+|+++|||++|+.||.... .......+.......+
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~~i~~~~~~~~ 233 (305)
T 2wtk_C 165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----------IYKLFENIGKGSYAIP 233 (305)
T ss_dssp SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----------HHHHHHHHHHCCCCCC
T ss_pred ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----------HHHHHHHHhcCCCCCC
Confidence 22345578999999999876543 789999999999999999999986322 1112222222222211
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 1011 LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 1011 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
. .....+.+++.+||+.||++|||++|+++.
T Consensus 234 ~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 234 G----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp S----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred C----ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1 123457789999999999999999999863
No 268
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-34 Score=331.30 Aligned_cols=334 Identities=21% Similarity=0.203 Sum_probs=217.4
Q ss_pred ccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceee
Q 045493 327 LSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYL 406 (1048)
Q Consensus 327 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~ 406 (1048)
+++++.|++++|.+....+..+..+++|++|++++|.+++..+..|.++++|++|+|++|.+++..|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~------------- 110 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPP------------- 110 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCT-------------
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCH-------------
Confidence 4455555555555554333344555555555555555554444455555555555555555554444
Q ss_pred ccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccC
Q 045493 407 LFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFG 486 (1048)
Q Consensus 407 l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~ 486 (1048)
..+..+++|++|++++|.++...+..|..+++|++|++++|.++++.+..|..+++|+.|++++|++++
T Consensus 111 -----------~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 111 -----------HVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp -----------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred -----------HHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 444445555555555555554444445666666666666666666666666666667777777766654
Q ss_pred cccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCcccccc
Q 045493 487 EISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGL 566 (1048)
Q Consensus 487 ~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 566 (1048)
. .+..+++|+.|++++|.+++ +...++|+.|++++|++... +.. ..++|++|++++|.+++. ..+..
T Consensus 180 ~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~ 246 (390)
T 3o6n_A 180 V---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLN 246 (390)
T ss_dssp C---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGG
T ss_pred c---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcC
Confidence 4 24455677777777777663 23345677788888777643 222 246788888888888743 46777
Q ss_pred ccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEE
Q 045493 567 LAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMN 646 (1048)
Q Consensus 567 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 646 (1048)
+++|++|+|++|+++++.|..|..+++|++|+|++|+++++. ..+..+++|++|+|++|+++ .+|..+..+++|++|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALN-LYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEE-CSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccC-cccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 888888888888888877888888888888888888887653 34467788888899998888 5666677888899999
Q ss_pred CCCCcccCCccccccccCCccEEEeccceecCCCCCcccccccccccccCCccccCC
Q 045493 647 LLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQNATIEAFQGNKELCGD 703 (1048)
Q Consensus 647 L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 703 (1048)
|++|+|+... +..++.|++|++++|+|++.... .-+.......+.+++..|..
T Consensus 325 L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 325 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCT
T ss_pred CCCCccceeC---chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecc
Confidence 9999988553 66778899999999998875322 22233333345566666653
No 269
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.9e-35 Score=334.47 Aligned_cols=255 Identities=20% Similarity=0.271 Sum_probs=185.5
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeeeCCeE------EE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSHTQHL------FL 850 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~------~l 850 (1048)
.....||+|+||.||+|.+. +++.||+|++......+. .....+++..++.++||||+++++++...+.. ++
T Consensus 45 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~l 124 (371)
T 4exu_A 45 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL 124 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEE
T ss_pred EEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEE
Confidence 34456899999999999876 688999999875433221 22334566667888999999999999876654 99
Q ss_pred EEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccC
Q 045493 851 VYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK 930 (1048)
Q Consensus 851 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~ 930 (1048)
||||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 125 v~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 125 VMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp EEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 999998 589888732 388999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCcccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccC---------CCccc---cc---
Q 045493 931 PDSSNWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS---------LPAPA---AN--- 994 (1048)
Q Consensus 931 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~---------~~~~~---~~--- 994 (1048)
. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ .+... ..
T Consensus 196 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 272 (371)
T 4exu_A 196 A---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 272 (371)
T ss_dssp -------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCH
T ss_pred c---CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhh
Confidence 3 2344678999999999887 6789999999999999999999999874331100 00000 00
Q ss_pred -chhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493 995 -MNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus 995 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
..........................+.+++.+||+.||++|||++|+++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000000000000000011224578899999999999999999999863
No 270
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.3e-35 Score=336.14 Aligned_cols=256 Identities=19% Similarity=0.234 Sum_probs=186.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcc--------cCceeeEeeEee----eCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR--------HRNIVKFYGFCS----HTQ 846 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~--------h~niv~~~~~~~----~~~ 846 (1048)
....||+|+||+||+|++. +++.||+|++.... .......++++.++.++ |+||+++++++. ...
T Consensus 41 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~ 118 (397)
T 1wak_A 41 VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGT 118 (397)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEE
T ss_pred EEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCc
Confidence 3456899999999999876 57789999986421 11223344555566554 888999999987 556
Q ss_pred eEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC----------
Q 045493 847 HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY---------- 916 (1048)
Q Consensus 847 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~---------- 916 (1048)
..++||||+ +|++.+++.... ...+++..+..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 119 ~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 119 HICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred eEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 899999999 556666664432 245899999999999999999999864 899999999999999775
Q ss_pred ---------------------------------------ceEEeccccccccCCCCCCccccccccccccccccccCCCC
Q 045493 917 ---------------------------------------KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRAN 957 (1048)
Q Consensus 917 ---------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 957 (1048)
.+||+|||.++..... .....||+.|+|||++.+..++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~ 271 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLIGSGYN 271 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHHTSCCC
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhhcCCCCC
Confidence 7999999999876432 3345789999999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCCCCcccccccCC----------------CcccccchhhhhhhccC--------CCCC----
Q 045493 958 EKCDVFNFGVLVLEVIEGKHPGHFLSLLLSL----------------PAPAANMNIVVNDLIDS--------RLPP---- 1009 (1048)
Q Consensus 958 ~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~--------~~~~---- 1009 (1048)
.++||||+||++|||++|+.||...+..... +................ ...+
T Consensus 272 ~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (397)
T 1wak_A 272 TPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLF 351 (397)
T ss_dssp THHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHH
T ss_pred cHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchh
Confidence 9999999999999999999998643211000 00000000000000000 0000
Q ss_pred -----CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1010 -----PLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1010 -----~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...........+.+++.+||+.||++|||++|+++
T Consensus 352 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 352 EVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred HhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00112455678999999999999999999999986
No 271
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.9e-35 Score=326.54 Aligned_cols=237 Identities=21% Similarity=0.319 Sum_probs=189.7
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-----ccchhhHHHHHHhhcc--cCceeeEeeEeeeCCeEEE
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-----IGINQKGFVSEITEIR--HRNIVKFYGFCSHTQHLFL 850 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-----~~~~~~~~~~~l~~l~--h~niv~~~~~~~~~~~~~l 850 (1048)
.....||+|+||.||+|.+. +++.||||++....... .......++..++.++ |+||+++++++...+..++
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~l 125 (320)
T 3a99_A 46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 125 (320)
T ss_dssp EEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEE
Confidence 34456899999999999875 67889999987643322 1123345666777775 6999999999999999999
Q ss_pred EEEccCC-CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC-CCCceEEeccccccc
Q 045493 851 VYEYLER-GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD-LEYKAHVSDFGTAKF 928 (1048)
Q Consensus 851 v~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~-~~~~~kl~DfG~a~~ 928 (1048)
|||++.+ ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++.
T Consensus 126 v~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 126 ILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp EEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 9999986 8999999753 3488999999999999999999999 999999999999999 789999999999987
Q ss_pred cCCCCCCccccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCC
Q 045493 929 LKPDSSNWSELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRL 1007 (1048)
Q Consensus 929 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1048)
.... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .....
T Consensus 200 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----------------~~~~~ 260 (320)
T 3a99_A 200 LKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----------------IRGQV 260 (320)
T ss_dssp CCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-----------------HHCCC
T ss_pred cccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh-----------------hcccc
Confidence 6532 2344679999999999887766 68899999999999999999998643211 01111
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1008 PPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1008 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
..+. .....+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 261 FFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccc----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1000 11235788999999999999999999986
No 272
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.4e-34 Score=325.43 Aligned_cols=254 Identities=18% Similarity=0.261 Sum_probs=188.1
Q ss_pred ceeeecccccccEEEEEE-c-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccC------ceeeEeeEeeeCCeEEEE
Q 045493 780 KMVLHGTGGCGTVYKAEL-T-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHR------NIVKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~-~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~------niv~~~~~~~~~~~~~lv 851 (1048)
....||+|+||+||+|.+ . +++.||+|++.... ........++..++.++|+ +|+++++++...+..++|
T Consensus 18 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv 95 (339)
T 1z57_A 18 IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIV 95 (339)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEE
T ss_pred EEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEE
Confidence 345689999999999987 3 57889999986422 1122334455556666554 599999999999999999
Q ss_pred EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC-----------------
Q 045493 852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL----------------- 914 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~----------------- 914 (1048)
|||+ +++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 96 ~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 96 FELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999 889999997543 23578999999999999999999999 9999999999999987
Q ss_pred --CCceEEeccccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccC-----
Q 045493 915 --EYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS----- 987 (1048)
Q Consensus 915 --~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~----- 987 (1048)
++.+||+|||.++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...+....
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 247 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMME 247 (339)
T ss_dssp ESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHH
T ss_pred ccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 668999999999864432 3346789999999999999999999999999999999999999864321100
Q ss_pred -----CCccc----------------ccc----hhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 045493 988 -----LPAPA----------------ANM----NIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042 (1048)
Q Consensus 988 -----~~~~~----------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 1042 (1048)
.+... +.. .........+ ..............+.+++.+||+.||++|||++|+
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 326 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKP-LKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA 326 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCC-GGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcc-hhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence 00000 000 0000000000 000000112345678999999999999999999999
Q ss_pred HH
Q 045493 1043 CN 1044 (1048)
Q Consensus 1043 l~ 1044 (1048)
++
T Consensus 327 l~ 328 (339)
T 1z57_A 327 LK 328 (339)
T ss_dssp TT
T ss_pred hc
Confidence 85
No 273
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.4e-34 Score=348.19 Aligned_cols=335 Identities=21% Similarity=0.201 Sum_probs=225.0
Q ss_pred ccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceee
Q 045493 327 LSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYL 406 (1048)
Q Consensus 327 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~ 406 (1048)
+++++.+++++|.+....+..+..+++|++|+|++|.+++..|..|+++++|+.|+|++|.+++
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------- 113 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY---------------- 113 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC----------------
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCC----------------
Confidence 3445555555555554444444555555555555555554444455555555555555555554
Q ss_pred ccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccC
Q 045493 407 LFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFG 486 (1048)
Q Consensus 407 l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~ 486 (1048)
..|..+..+++|++|++++|.+++..+..|..+++|++|+|++|.++++++..|..+++|+.|+|++|.+++
T Consensus 114 --------~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 114 --------LPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp --------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred --------CCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 444444555555555555555555455555666666666666666666666666666666666666666665
Q ss_pred cccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCcccccc
Q 045493 487 EISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGL 566 (1048)
Q Consensus 487 ~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 566 (1048)
.. +..+++|+.|++++|.+++ +...+.|+.|++++|.+....+. + .++|+.|+|++|.+++ +..+..
T Consensus 186 ~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 186 VD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp CC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGG
T ss_pred cC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--Chhhcc
Confidence 42 3445667777777777663 23445677888888877643322 2 2578888888888875 356778
Q ss_pred ccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEE
Q 045493 567 LAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMN 646 (1048)
Q Consensus 567 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 646 (1048)
+++|++|+|++|.|+++.|..|..+++|+.|+|++|+++++ +..+..+++|+.|+|++|.++ .+|..+..+++|++|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 88888888888888888888888888888888888888775 344567888999999999998 5777788889999999
Q ss_pred CCCCcccCCccccccccCCccEEEeccceecCCCCCcccccccccccccCCccccCCC
Q 045493 647 LLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSKAFQNATIEAFQGNKELCGDV 704 (1048)
Q Consensus 647 L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~ 704 (1048)
|++|+|++.. +..++.|+.|++++|+|+|.... ..+.......+.++...|+..
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 9999998653 56778999999999999886432 234444555677888888864
No 274
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.5e-35 Score=324.05 Aligned_cols=257 Identities=21% Similarity=0.267 Sum_probs=181.4
Q ss_pred cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEee--------------
Q 045493 779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCS-------------- 843 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~-------------- 843 (1048)
.....||+|+||.||+|.+. +++.||+|++..... .......+++..++.++||||+++++++.
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 14 MDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EEEEECC-----CEEEEEETTTTEEEEEEEEECCSH-HHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred eEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCCh-HHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence 34556899999999999987 488899998864322 11223445677778899999999999873
Q ss_pred eCCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC-CCCceEEec
Q 045493 844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD-LEYKAHVSD 922 (1048)
Q Consensus 844 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~-~~~~~kl~D 922 (1048)
+....++||||++ |+|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||+|
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 4467899999998 599999854 3478899999999999999999999 999999999999997 567999999
Q ss_pred cccccccCCCC---CCcccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccC-------CCcc
Q 045493 923 FGTAKFLKPDS---SNWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS-------LPAP 991 (1048)
Q Consensus 923 fG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~-------~~~~ 991 (1048)
||+++...... .......+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||........ .+..
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 99998764322 22234567999999998865 6789999999999999999999999874332100 0000
Q ss_pred cccchhh--------hhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 992 AANMNIV--------VNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 992 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
....... ..........+..........++.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0000000 0000000000000001123456889999999999999999999986
No 275
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.6e-35 Score=329.45 Aligned_cols=251 Identities=22% Similarity=0.275 Sum_probs=168.9
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHH-HHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGF-VSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~-~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|... +++.||||++..............+ ...++.++||||+++++++...+..++||||+++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~ 105 (327)
T 3aln_A 26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105 (327)
T ss_dssp C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred ehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence 3456899999999999886 6888999998754332211112222 2245667899999999999999999999999986
Q ss_pred CCHHHHHhcc--ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493 858 GSLATILSNE--ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN 935 (1048)
Q Consensus 858 g~L~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 935 (1048)
+|.+++... .....+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~ 181 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI-A 181 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccccc-c
Confidence 888887531 12345889999999999999999999852 79999999999999999999999999998765332 2
Q ss_pred cccccccccccccccc----ccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCC-
Q 045493 936 WSELAGTCGYIAPELA----YTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP- 1010 (1048)
Q Consensus 936 ~~~~~gt~~y~aPE~~----~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1010 (1048)
.....||+.|+|||++ .+..++.++||||+||++|||++|+.||........ ..........+..
T Consensus 182 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----------~~~~~~~~~~~~~~ 251 (327)
T 3aln_A 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----------QLTQVVKGDPPQLS 251 (327)
T ss_dssp ------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------------CCCCCSCCCCCC
T ss_pred cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----------HHHHHhcCCCCCCC
Confidence 2344799999999998 456789999999999999999999999864321100 0111111111100
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1011 LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1011 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
..........+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 252 NSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0001122346888999999999999999999975
No 276
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.4e-35 Score=349.31 Aligned_cols=260 Identities=24% Similarity=0.252 Sum_probs=193.2
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee------CCeEEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH------TQHLFLVY 852 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~------~~~~~lv~ 852 (1048)
....||+|+||+||+|.+. +++.||||++..............+++.++.++||||+++++++.. .+..++||
T Consensus 18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEE
Confidence 3446899999999999875 6889999998654333323334556777888999999999998755 67789999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc---eEEecccccccc
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK---AHVSDFGTAKFL 929 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~---~kl~DfG~a~~~ 929 (1048)
||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||.++..
T Consensus 98 Ey~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~ 174 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 174 (676)
T ss_dssp ECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBT
T ss_pred EeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccccccccc
Confidence 9999999999998765555688999999999999999999999 9999999999999997765 999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcc---cccchhhhhhh----
Q 045493 930 KPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAP---AANMNIVVNDL---- 1002 (1048)
Q Consensus 930 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~---~~~~~~~~~~~---- 1002 (1048)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........+... .........+.
T Consensus 175 ~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~ 253 (676)
T 3qa8_A 175 DQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGA 253 (676)
T ss_dssp TSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSS
T ss_pred cccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccc
Confidence 5432 334567999999999999999999999999999999999999998642111100000 00000000000
Q ss_pred --ccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 045493 1003 --IDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVC 1043 (1048)
Q Consensus 1003 --~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 1043 (1048)
.....+.+..........+.+++.+||+.||++|||++|++
T Consensus 254 ~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 254 VKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred cccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 11111212112233456788999999999999999997753
No 277
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=321.98 Aligned_cols=236 Identities=21% Similarity=0.320 Sum_probs=184.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-----ccchhhHHHHHHhhc----ccCceeeEeeEeeeCCeEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-----IGINQKGFVSEITEI----RHRNIVKFYGFCSHTQHLF 849 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-----~~~~~~~~~~~l~~l----~h~niv~~~~~~~~~~~~~ 849 (1048)
....||+|+||.||+|++. +++.||+|++....... .......++..+.++ +||||+++++++...+..+
T Consensus 35 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~ 114 (312)
T 2iwi_A 35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFM 114 (312)
T ss_dssp EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CE
T ss_pred EeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEE
Confidence 4456899999999999875 67889999986543221 122334456666666 8999999999999999999
Q ss_pred EEEEc-cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC-CCCceEEecccccc
Q 045493 850 LVYEY-LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD-LEYKAHVSDFGTAK 927 (1048)
Q Consensus 850 lv~e~-~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~-~~~~~kl~DfG~a~ 927 (1048)
+|||| +++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 115 ~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~ 188 (312)
T 2iwi_A 115 LVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGA 188 (312)
T ss_dssp EEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCCSSCE
T ss_pred EEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEcchhh
Confidence 99999 78999999997533 489999999999999999999999 999999999999999 78999999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCC
Q 045493 928 FLKPDSSNWSELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSR 1006 (1048)
Q Consensus 928 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1048)
..... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ....
T Consensus 189 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----------------~~~~ 249 (312)
T 2iwi_A 189 LLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI-----------------LEAE 249 (312)
T ss_dssp ECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-----------------HHTC
T ss_pred hcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH-----------------hhhc
Confidence 76533 2345679999999999887766 45899999999999999999998632211 0111
Q ss_pred CCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1007 LPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1007 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
...+ ......+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 250 LHFP----AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp CCCC----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred cCCc----ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111 112345788999999999999999999987
No 278
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=9.5e-35 Score=328.46 Aligned_cols=253 Identities=19% Similarity=0.275 Sum_probs=184.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeeeCCe------EEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSHTQH------LFLV 851 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~------~~lv 851 (1048)
....||+|+||.||+|.+. +++.||||++......+. .....+++..++.++||||+++++++...+. .|+|
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 28 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred EeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEE
Confidence 4456899999999999886 688999999865432221 1233456666788899999999999976543 5999
Q ss_pred EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCC
Q 045493 852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKP 931 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 931 (1048)
|||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 108 ~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp EECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred ecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 99998 588877632 388999999999999999999999 999999999999999999999999999986542
Q ss_pred CCCCcccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccC---------CCccc---ccch--
Q 045493 932 DSSNWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS---------LPAPA---ANMN-- 996 (1048)
Q Consensus 932 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~---------~~~~~---~~~~-- 996 (1048)
. .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.... .+... ....
T Consensus 179 ~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 255 (353)
T 3coi_A 179 E---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 255 (353)
T ss_dssp --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHH
T ss_pred C---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHH
Confidence 2 334578999999999876 6789999999999999999999999875332100 00000 0000
Q ss_pred --hhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 997 --IVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 997 --~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
........................+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000000000011223456889999999999999999999986
No 279
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=323.13 Aligned_cols=247 Identities=20% Similarity=0.289 Sum_probs=171.2
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccc-hhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGI-NQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~-~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
....||+|+||.||+|++. +++.||||++.......... ...++...++.++||||+++++++.+.+..++||||+ +
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 107 (318)
T 2dyl_A 29 NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-G 107 (318)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred ccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-C
Confidence 3456899999999999986 68899999987543322111 1222333456778999999999999999999999999 5
Q ss_pred CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHH-DCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+.+..+.... ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 108 ~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~ 181 (318)
T 2dyl_A 108 TCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK-AK 181 (318)
T ss_dssp EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred CcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-cc
Confidence 5666665432 2358899999999999999999998 5 89999999999999999999999999997664332 23
Q ss_pred cccccccccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493 937 SELAGTCGYIAPELAY-----TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
....||+.|+|||++. ...++.++||||+||++|||++|+.||..... .............+..
T Consensus 182 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~~~~~~~~~~~~~~~~- 250 (318)
T 2dyl_A 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT----------DFEVLTKVLQEEPPLL- 250 (318)
T ss_dssp -----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS----------HHHHHHHHHHSCCCCC-
T ss_pred cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc----------cHHHHHHHhccCCCCC-
Confidence 3457899999999984 45688999999999999999999999863211 1111222222211111
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1012 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
.........+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 251 PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 001112345788999999999999999999976
No 280
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.3e-34 Score=327.11 Aligned_cols=251 Identities=18% Similarity=0.255 Sum_probs=184.1
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcc-----------cCceeeEeeEeeeCC-
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-----------HRNIVKFYGFCSHTQ- 846 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-----------h~niv~~~~~~~~~~- 846 (1048)
....||+|+||+||+|++. +++.||||++..... .......++..+.+++ ||||+++++++...+
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 100 (373)
T 1q8y_A 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV--YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP 100 (373)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH--HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET
T ss_pred EEEeeeecCCeEEEEEEecCCCcEEEEEEecCCcc--chhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCC
Confidence 3456899999999999875 678899999864211 1122334444454443 899999999987654
Q ss_pred ---eEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC------CCCc
Q 045493 847 ---HLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD------LEYK 917 (1048)
Q Consensus 847 ---~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~------~~~~ 917 (1048)
..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.+ +|+||||||+||+++ ..+.
T Consensus 101 ~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 101 NGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp TEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEE
T ss_pred CCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcce
Confidence 789999999 889999997543 234889999999999999999999953 899999999999994 4458
Q ss_pred eEEeccccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchh
Q 045493 918 AHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNI 997 (1048)
Q Consensus 918 ~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 997 (1048)
+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.......... .......
T Consensus 177 ~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~ 252 (373)
T 1q8y_A 177 IKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK-DDDHIAQ 252 (373)
T ss_dssp EEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C-HHHHHHH
T ss_pred EEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC-hHHHHHH
Confidence 999999999876432 234578999999999999999999999999999999999999987432110000 0000000
Q ss_pred hh--------------------------------------hhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCH
Q 045493 998 VV--------------------------------------NDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTM 1039 (1048)
Q Consensus 998 ~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 1039 (1048)
.. ........ .........+.+++.+||+.||++|||+
T Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKY----KFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTT----CCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcc----cCCcchHHHHHHHHHHHhccCccccCCH
Confidence 00 00000000 0113456789999999999999999999
Q ss_pred HHHHH
Q 045493 1040 QKVCN 1044 (1048)
Q Consensus 1040 ~evl~ 1044 (1048)
+|+++
T Consensus 329 ~ell~ 333 (373)
T 1q8y_A 329 GGLVN 333 (373)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 99986
No 281
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.9e-34 Score=322.66 Aligned_cols=254 Identities=17% Similarity=0.245 Sum_probs=185.3
Q ss_pred ceeeecccccccEEEEEEc-CC-CceeeEEeccCCCCcccchhhHHHHHHhhcccCc------eeeEeeEeeeCCeEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT-SG-DTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRN------IVKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~-~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~n------iv~~~~~~~~~~~~~lv 851 (1048)
....||+|+||+||+|... ++ +.||+|++.... ........++..++.++|++ ++.+++++...+..++|
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv 100 (355)
T 2eu9_A 23 IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIA 100 (355)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred EEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEE
Confidence 4456899999999999886 34 578999886421 11223344556666666655 99999999999999999
Q ss_pred EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE-------------------
Q 045493 852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL------------------- 912 (1048)
Q Consensus 852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll------------------- 912 (1048)
|||+ +|++.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 101 ~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 101 FELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred Eecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccccccc
Confidence 9999 557777775432 23589999999999999999999999 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCccccccc------
Q 045493 913 DLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL------ 986 (1048)
Q Consensus 913 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~------ 986 (1048)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.......
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 252 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 252 (355)
T ss_dssp ESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 56789999999999864432 234679999999999999999999999999999999999999986432110
Q ss_pred ----CCCccccc----------------c----hhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 045493 987 ----SLPAPAAN----------------M----NIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKV 1042 (1048)
Q Consensus 987 ----~~~~~~~~----------------~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 1042 (1048)
..+..... . ......... ...............+.+++.+||+.||++|||++|+
T Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 331 (355)
T 2eu9_A 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331 (355)
T ss_dssp HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCC-CGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCC-cccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence 00000000 0 000000000 0000000012234578899999999999999999999
Q ss_pred HH
Q 045493 1043 CN 1044 (1048)
Q Consensus 1043 l~ 1044 (1048)
++
T Consensus 332 l~ 333 (355)
T 2eu9_A 332 LL 333 (355)
T ss_dssp TT
T ss_pred hc
Confidence 85
No 282
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.9e-33 Score=314.64 Aligned_cols=307 Identities=26% Similarity=0.397 Sum_probs=183.8
Q ss_pred cccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccc
Q 045493 324 LGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLN 403 (1048)
Q Consensus 324 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 403 (1048)
+..+++|+.|++++|.+.. ++ .+..+++|++|++++|++++..+ +.++++|++|++++|.++. ++ .+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 3456666777777766653 23 36666677777777776664332 6666666666666666653 22 355555555
Q ss_pred eeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCc
Q 045493 404 KYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNN 483 (1048)
Q Consensus 404 ~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~ 483 (1048)
.|++++|++++. .+ +..+++|++|++++|......+ .+..+++|+.|++++|.
T Consensus 114 ~L~l~~n~i~~~------------------------~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~ 166 (347)
T 4fmz_A 114 ELYLNEDNISDI------------------------SP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESK 166 (347)
T ss_dssp EEECTTSCCCCC------------------------GG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSC
T ss_pred EEECcCCcccCc------------------------hh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCC
Confidence 555555555432 22 4455555555555553322222 25555566666666666
Q ss_pred ccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccc
Q 045493 484 FFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLE 563 (1048)
Q Consensus 484 l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 563 (1048)
+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+
T Consensus 167 ~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-- 238 (347)
T 4fmz_A 167 VKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-- 238 (347)
T ss_dssp CCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred cCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--
Confidence 554333 5556666666666666654322 5566666666666666664333 5566666666666666664322
Q ss_pred cccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccC
Q 045493 564 LGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLE 643 (1048)
Q Consensus 564 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 643 (1048)
+..+++|++|++++|+++.+ ..+..+++|++|++++|++++. ..+..+++|++|++++|++++..+..+..+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 66666666666666666654 3466666677777777766664 3456667777777777777766666667777777
Q ss_pred eEECCCCcccCCccccccccCCccEEEeccceec
Q 045493 644 YMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQ 677 (1048)
Q Consensus 644 ~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~ 677 (1048)
+|++++|++++..| +..++.|++|++++|+++
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 77777777776555 666777777777777664
No 283
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.8e-33 Score=322.70 Aligned_cols=313 Identities=20% Similarity=0.195 Sum_probs=228.0
Q ss_pred CCCCCcEEEccCceeecccccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEE
Q 045493 302 NLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFF 381 (1048)
Q Consensus 302 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 381 (1048)
.+++++.|++++|.++...+..|..+++|+.|++++|.+.+..+..|..+++|++|+|++|.+++..|..|+++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35789999999999997766678899999999999999998888899999999999999999998888889999999999
Q ss_pred EeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccc
Q 045493 382 ALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLT 461 (1048)
Q Consensus 382 ~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~ 461 (1048)
+|++|+++...+..|..+++|+.|++++|++++.. +..|..+++|++|++++|+++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~------------------------~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE------------------------DDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC------------------------TTTTSSCTTCCEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC------------------------hhhccCCCCCCEEECCCCcCC
Confidence 99999998544444566666666666666655444 444555555555555555555
Q ss_pred cCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCcccc
Q 045493 462 GNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLG 541 (1048)
Q Consensus 462 ~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 541 (1048)
++. +..+++|+.|++++|.+++. ...++|++|++++|.++.. |.. ..++|+.|++++|++++. ..+.
T Consensus 179 ~~~---~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~ 245 (390)
T 3o6n_A 179 HVD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLL 245 (390)
T ss_dssp BCC---GGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGG
T ss_pred ccc---cccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHc
Confidence 442 23345566666666655432 2234566677777766643 222 246677777777777643 4667
Q ss_pred CCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeE
Q 045493 542 KLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKL 621 (1048)
Q Consensus 542 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 621 (1048)
.+++|++|+|++|.+++..|..+..+++|++|+|++|+++++ +..+..+++|++|+|++|+++++ +..+..+++|++|
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L 323 (390)
T 3o6n_A 246 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLLHV-ERNQPQFDRLENL 323 (390)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEE-ECSSSCCTTCCEEECCSSCCCCC-GGGHHHHTTCSEE
T ss_pred CCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCccc-CcccCCCCCCCEEECCCCcceec-CccccccCcCCEE
Confidence 777777777777777766677777777788888888877775 44556677888888888888754 3346778889999
Q ss_pred ECCCCcccCcCCcCcCCccccCeEECCCCcccCCc
Q 045493 622 DLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPI 656 (1048)
Q Consensus 622 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 656 (1048)
+|++|+|++. + +..+++|++|++++|++++..
T Consensus 324 ~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 324 YLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp ECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHH
T ss_pred ECCCCcccee-C--chhhccCCEEEcCCCCccchh
Confidence 9999988754 2 677889999999999998643
No 284
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=9.5e-33 Score=311.51 Aligned_cols=309 Identities=27% Similarity=0.363 Sum_probs=229.1
Q ss_pred cccCCCCCCcEEEccCceeecccccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCC
Q 045493 298 KEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSN 377 (1048)
Q Consensus 298 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 377 (1048)
..+..+++|++|++++|.++.. + .+..+++|+.|++++|.+++..+ +..+++|++|++++|.+++ + ..+.++++
T Consensus 38 ~~~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~ 111 (347)
T 4fmz_A 38 VTQEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-I-SALQNLTN 111 (347)
T ss_dssp ECHHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTT
T ss_pred ccchhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-c-hHHcCCCc
Confidence 3456789999999999999854 3 48899999999999999986443 9999999999999999985 3 46999999
Q ss_pred CcEEEeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecC
Q 045493 378 LKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLER 457 (1048)
Q Consensus 378 L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~ 457 (1048)
|++|++++|.+.+..+ +..+++|+.|++++|......+ .+..+++|++|++++
T Consensus 112 L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-------------------------~~~~l~~L~~L~l~~ 164 (347)
T 4fmz_A 112 LRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-------------------------PLSNMTGLNYLTVTE 164 (347)
T ss_dssp CSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-------------------------GGTTCTTCCEEECCS
T ss_pred CCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-------------------------chhhCCCCcEEEecC
Confidence 9999999999996444 7788888888888775543322 244455555555555
Q ss_pred CccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcC
Q 045493 458 NQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIP 537 (1048)
Q Consensus 458 n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 537 (1048)
|.+.++.. +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+
T Consensus 165 ~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~ 238 (347)
T 4fmz_A 165 SKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP 238 (347)
T ss_dssp SCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred CCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc
Confidence 55554433 5556666666666666654433 5666677777777777764433 6677777777777777775433
Q ss_pred ccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccc
Q 045493 538 KQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQ 617 (1048)
Q Consensus 538 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 617 (1048)
+..+++|++|++++|.+++. ..+..+++|++|++++|+++++ ..+..+++|+.|++++|++++..+..+..+++
T Consensus 239 --~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 312 (347)
T 4fmz_A 239 --LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN 312 (347)
T ss_dssp --GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTT
T ss_pred --hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhcccc
Confidence 67777777778877777743 4577777888888888887775 45777888888888888888877788888888
Q ss_pred cCeEECCCCcccCcCCcCcCCccccCeEECCCCccc
Q 045493 618 LSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLS 653 (1048)
Q Consensus 618 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 653 (1048)
|++|++++|++++..| +..+++|++|++++|+|+
T Consensus 313 L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 313 LTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 8888888888886555 777888888888888875
No 285
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.5e-33 Score=307.68 Aligned_cols=224 Identities=21% Similarity=0.273 Sum_probs=171.0
Q ss_pred eeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHH-hhcccCceeeEeeEeee----CCeEEEEEEcc
Q 045493 782 VLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEI-TEIRHRNIVKFYGFCSH----TQHLFLVYEYL 855 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l-~~l~h~niv~~~~~~~~----~~~~~lv~e~~ 855 (1048)
.+||+|+||.||+|... +++.||+|++... ....+++..+ +..+||||+++++++.. ....++||||+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 56899999999999885 6789999998532 1233344444 56689999999999876 67789999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC---CCceEEeccccccccCCC
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL---EYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~---~~~~kl~DfG~a~~~~~~ 932 (1048)
++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++....
T Consensus 98 ~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-- 171 (299)
T 3m2w_A 98 DGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-- 171 (299)
T ss_dssp CSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT--
T ss_pred CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc--
Confidence 9999999997643 23589999999999999999999999 9999999999999998 7899999999987532
Q ss_pred CCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493 933 SSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus 933 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
+..++.++||||+||++|||++|+.||........... ............+..
T Consensus 172 --------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 224 (299)
T 3m2w_A 172 --------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-------MKTRIRMGQYEFPNP 224 (299)
T ss_dssp --------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC-------SCCSSCTTCCSSCHH
T ss_pred --------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH-------HHHHHhhccccCCch
Confidence 13467899999999999999999999864332111100 001111111121211
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
........+.+++.+||+.||++|||++|+++
T Consensus 225 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 12234567889999999999999999999986
No 286
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.4e-33 Score=309.13 Aligned_cols=259 Identities=31% Similarity=0.509 Sum_probs=218.8
Q ss_pred cccceeEecCCcccc--CcccccCCCCCCCeeeCcC-CcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcE
Q 045493 448 TSLYSLRLERNQLTG--NISEVFGIYPDLELLDLSN-NNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHK 524 (1048)
Q Consensus 448 ~~L~~L~L~~n~l~~--~~~~~~~~~~~L~~L~Ls~-n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 524 (1048)
.++++|+|++|.+++ ..+..|..+++|++|++++ |.+.+..|..+..+++|++|++++|.+++..|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356667777777766 5566677777777777774 7777777777888888888888888888788888888888888
Q ss_pred EEcccCcccCCcCccccCCCccCEEeecCccccCCCcccccccc-ccceeecccCccccccccccccccccccccccccc
Q 045493 525 LDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLA-ELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQ 603 (1048)
Q Consensus 525 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~ 603 (1048)
|+|++|++++..|..|..+++|++|+|++|++++.+|..+..++ +|++|++++|++++..|..+..+. |++|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 88888888888888888888888888888888878888888887 888888888888888888888887 9999999999
Q ss_pred ccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCCc
Q 045493 604 FSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683 (1048)
Q Consensus 604 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~ 683 (1048)
+++..+..+..+++|+.|+|++|++++.++. +..+++|++|+|++|+|++.+|..+..++.|++|++++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9888888888999999999999999876665 788899999999999999999999999999999999999999999998
Q ss_pred ccccccccccccCCccccCCCCCCCCC
Q 045493 684 KAFQNATIEAFQGNKELCGDVTGLPPC 710 (1048)
Q Consensus 684 ~~~~~~~~~~~~~n~~lc~~~~~~~~c 710 (1048)
..++......+.+|+++||.+. ++|
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p~--~~C 312 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSPL--PAC 312 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTTS--SCC
T ss_pred ccccccChHHhcCCCCccCCCC--CCC
Confidence 8888888888999999999753 356
No 287
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.6e-33 Score=305.55 Aligned_cols=225 Identities=12% Similarity=0.087 Sum_probs=171.4
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc--cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI--GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE 856 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 856 (1048)
....||+|+||.||+|++. +++.||+|++........ .....++...+..++||||+++++++.+.+..|+||||++
T Consensus 35 i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 114 (286)
T 3uqc_A 35 LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIR 114 (286)
T ss_dssp EEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecC
Confidence 3456899999999999986 488999999876543221 1233455666788899999999999999999999999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW 936 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 936 (1048)
+++|.+++++. ....++.+++.|++.||+|||+. +|+||||||+||+++.+|.+||+++|
T Consensus 115 g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------------ 174 (286)
T 3uqc_A 115 GGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------------ 174 (286)
T ss_dssp EEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------------
T ss_pred CCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------------
Confidence 99999999542 34557889999999999999999 99999999999999999999998543
Q ss_pred cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493 937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus 937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
|++ .++.++||||+||++|||+||+.||............. .......+........
T Consensus 175 --------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 231 (286)
T 3uqc_A 175 --------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE--------RDTAGQPIEPADIDRD 231 (286)
T ss_dssp --------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC--------BCTTSCBCCHHHHCTT
T ss_pred --------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH--------HHhccCCCChhhcccC
Confidence 333 37899999999999999999999987543221110000 0001111111111112
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493 1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus 1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
....+.+++.+||+.||++| |+.|+++.|++
T Consensus 232 ~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~ 262 (286)
T 3uqc_A 232 IPFQISAVAARSVQGDGGIR-SASTLLNLMQQ 262 (286)
T ss_dssp SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcccCCccC-CHHHHHHHHHH
Confidence 33568899999999999999 99999999863
No 288
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.5e-33 Score=335.07 Aligned_cols=312 Identities=20% Similarity=0.191 Sum_probs=228.4
Q ss_pred CCCCcEEEccCceeecccccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEE
Q 045493 303 LKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFA 382 (1048)
Q Consensus 303 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 382 (1048)
+.+++.+++++|.++.+.+..|..+++|+.|++++|.+.+..|..|..+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 56889999999999987777788999999999999999988888999999999999999999988888899999999999
Q ss_pred eecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCcccc
Q 045493 383 LRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTG 462 (1048)
Q Consensus 383 L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 462 (1048)
|++|.+++..+..|..+++|+.|++++|.+++.. |..|..+++|++|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~------------------------~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE------------------------DDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC------------------------TTTTTTCTTCCEEECTTSCCSB
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCC------------------------hhhhhcCCcCcEEECcCCCCCC
Confidence 9999988655555566666666666665555444 4445555555555555555554
Q ss_pred CcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccC
Q 045493 463 NISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGK 542 (1048)
Q Consensus 463 ~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 542 (1048)
++ +..+++|+.|++++|.+++. ...++|+.|++++|.++...+.. .++|+.|+|++|.+++ +..+..
T Consensus 186 ~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 186 VD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp CC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGG
T ss_pred cC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--Chhhcc
Confidence 43 23345566666666655432 22345666666666666332221 2567777777777774 356777
Q ss_pred CCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEE
Q 045493 543 LTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLD 622 (1048)
Q Consensus 543 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 622 (1048)
+++|++|+|++|.+++..|..|+.+++|++|+|++|+++++ |..+..+++|+.|+|++|+++.+ +..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~~i-~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLLHV-ERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCCCC-GGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCCcc-CcccccCCCCCEEE
Confidence 77777777777777777777777777788888888877775 55566678888888888888754 34567788899999
Q ss_pred CCCCcccCcCCcCcCCccccCeEECCCCcccCCc
Q 045493 623 LSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPI 656 (1048)
Q Consensus 623 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 656 (1048)
|++|.|++.. +..+++|++|++++|++++..
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHH
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCChh
Confidence 9999887542 667789999999999998654
No 289
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-33 Score=343.82 Aligned_cols=231 Identities=22% Similarity=0.268 Sum_probs=179.3
Q ss_pred ceeeecccccccEEEEEEc--CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCe-----EEEEE
Q 045493 780 KMVLHGTGGCGTVYKAELT--SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQH-----LFLVY 852 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~-----~~lv~ 852 (1048)
....||+|+||+||+|.+. +++.||||++......+.......+...+.+++||||+++++++.+.+. .|+||
T Consensus 84 i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~ 163 (681)
T 2pzi_A 84 VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVM 163 (681)
T ss_dssp EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEE
Confidence 3456899999999999886 5788999988654332222233455666788899999999999987655 79999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
||+++++|.+++.. .+++.++..++.||+.||.|||+. +||||||||+||+++.+ .+||+|||+++.....
T Consensus 164 E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 164 EYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp ECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred EeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 99999999988743 489999999999999999999999 99999999999999875 8999999999876533
Q ss_pred CCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493 933 SSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus 933 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
....||+.|+|||++.+. ++.++|||||||++|||++|..||..... ...+. ..
T Consensus 235 ----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~--------------------~~~~~-~~ 288 (681)
T 2pzi_A 235 ----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV--------------------DGLPE-DD 288 (681)
T ss_dssp ----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC--------------------SSCCT-TC
T ss_pred ----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc--------------------ccccc-cc
Confidence 345799999999998765 48999999999999999999888652110 00111 11
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHH-HHHHH
Q 045493 1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQ-KVCNL 1045 (1048)
Q Consensus 1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~~ 1045 (1048)
........+.+++.+||++||++||+.. ++...
T Consensus 289 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~ 322 (681)
T 2pzi_A 289 PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQ 322 (681)
T ss_dssp HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred cccccCHHHHHHHhhhccCChhhCCCHHHHHHHH
Confidence 1223345788999999999999999654 44443
No 290
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.7e-33 Score=321.23 Aligned_cols=238 Identities=15% Similarity=0.085 Sum_probs=169.3
Q ss_pred ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc--cchhhHHHHHHhhccc-Cce---------e----------
Q 045493 780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI--GINQKGFVSEITEIRH-RNI---------V---------- 836 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~~l~~l~h-~ni---------v---------- 836 (1048)
...+||+|+||+||+|++. +++.||||++........ ....+++...+..++| ++. +
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 4457999999999999965 688999998874332221 2223445555566655 211 1
Q ss_pred --eEeeEeee-----CCeEEEEEEccCCCCHHHHHhcc----ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCC
Q 045493 837 --KFYGFCSH-----TQHLFLVYEYLERGSLATILSNE----ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDI 905 (1048)
Q Consensus 837 --~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Di 905 (1048)
.+..++.. ...++++|+++ +|+|.++++.. .....+++..+..++.|+++||+|||+. +||||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 11111111 22467778776 56999998421 1234578889999999999999999999 9999999
Q ss_pred CCCCeEECCCCceEEeccccccccCCCCCCcccccccccccccccc----------ccCCCCchhhHHHHHHHHHHHHhC
Q 045493 906 SSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELA----------YTMRANEKCDVFNFGVLVLEVIEG 975 (1048)
Q Consensus 906 k~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dvws~Gvvl~elltg 975 (1048)
||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++||||+||++|||++|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg 313 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred ccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence 999999999999999999999865432 344567 999999998 555688999999999999999999
Q ss_pred CCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493 976 KHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus 976 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
+.||....... ......... .. ....+.+++.+||+.||++|||+.|+++
T Consensus 314 ~~Pf~~~~~~~-----------~~~~~~~~~-~~-------~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 314 DLPNTDDAALG-----------GSEWIFRSC-KN-------IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp SCCCCTTGGGS-----------CSGGGGSSC-CC-------CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCcchhh-----------hHHHHHhhc-cc-------CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99986433211 111111111 11 1245888999999999999999988764
No 291
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=8.8e-32 Score=301.22 Aligned_cols=294 Identities=25% Similarity=0.337 Sum_probs=156.7
Q ss_pred CccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccccccccc
Q 045493 25 QLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALS 104 (1048)
Q Consensus 25 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~ 104 (1048)
+++++++++|+++ .+|..+. ++|++|+|++|.++++.|.+|+.+++|++|+|++|+++++.|..|.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4555666665555 3343332 355555555555555555555555555555555555555555555555555555555
Q ss_pred ceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCC
Q 045493 105 YNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKN 184 (1048)
Q Consensus 105 ~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~ 184 (1048)
+|+++ .+|..+. ++|++|++++|++ ++..+..|..+++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i---------------------------------------~~~~~~~~~~l~~ 148 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRI---------------------------------------RKVPKGVFSGLRN 148 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCC---------------------------------------CCCCSGGGSSCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCcc---------------------------------------CccCHhHhCCCcc
Confidence 55555 2333222 4455555555544 4444445566666
Q ss_pred cceeeccccCccc--cCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeec
Q 045493 185 LTFVYLNNNRIVG--SIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYL 262 (1048)
Q Consensus 185 L~~L~L~~n~i~~--~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 262 (1048)
|++|++++|.++. ..|..+..+ +|++|++++|++++ +|..+. ++|++|++++|.+++..+..|..+++|++|++
T Consensus 149 L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L 224 (332)
T 2ft3_A 149 MNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGL 224 (332)
T ss_dssp CCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBC
T ss_pred CCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 6666666666642 455556555 66666666666653 444332 46666666666666555556666666666666
Q ss_pred ccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccccccccccceeeeccccccC
Q 045493 263 SHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYG 342 (1048)
Q Consensus 263 ~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 342 (1048)
++|++.+..+..|..+++|++|++++ |.+. .+|..+..+++|+.|++++|++++..+..|+....
T Consensus 225 ~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~------------- 289 (332)
T 2ft3_A 225 GHNQIRMIENGSLSFLPTLRELHLDN-NKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGF------------- 289 (332)
T ss_dssp CSSCCCCCCTTGGGGCTTCCEEECCS-SCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSC-------------
T ss_pred CCCcCCcCChhHhhCCCCCCEEECCC-CcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccc-------------
Confidence 66666554444444444444444433 3333 33444445555555555555555444443332100
Q ss_pred CCCcchhccCCCCeEeccCCccc--cCcChhhhccCCCcEEEeeccc
Q 045493 343 SIPEELGRLKSLSQLSLSVNKLN--GSIPHCLGNLSNLKFFALRENE 387 (1048)
Q Consensus 343 ~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~l~~l~~L~~L~L~~n~ 387 (1048)
-....+|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 290 -----~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 290 -----GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp -----CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred -----ccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 001245666777777665 4556667777777777776664
No 292
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1.1e-32 Score=305.16 Aligned_cols=253 Identities=29% Similarity=0.461 Sum_probs=222.5
Q ss_pred CcccEEEeecccccC--CCCCCcccccccceeEecC-CccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccE
Q 045493 424 GSLTHFSVRNNNFVG--PIPRSLQNCTSLYSLRLER-NQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLAT 500 (1048)
Q Consensus 424 ~~L~~L~l~~N~l~~--~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~ 500 (1048)
.++++|++++|.+.+ .+|..+.++++|++|++++ |.+.+..+..|..+++|++|+|++|++++..|..+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467888888888887 7788888888888888884 8888777888888888888888888888888888888889999
Q ss_pred EEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCC-ccCEEeecCccccCCCccccccccccceeecccCc
Q 045493 501 LNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLT-SLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANR 579 (1048)
Q Consensus 501 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 579 (1048)
|++++|.+++.+|..+..+++|++|+|++|++++.+|..+..++ +|++|++++|++++.+|..+..++ |++|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999888888888999999999999999888888888887 899999999999888888888887 9999999999
Q ss_pred ccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCcccc
Q 045493 580 LSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSC 659 (1048)
Q Consensus 580 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 659 (1048)
+++..|..|..+++|+.|+|++|++++..+. +..+++|++|+|++|+|++.+|..+..+++|++|+|++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9988888899999999999999999876555 778899999999999999999999999999999999999999988887
Q ss_pred ccccCCccEEEeccce-ecCC
Q 045493 660 FRRMHGLSSIDVSYNE-LQGS 679 (1048)
Q Consensus 660 ~~~l~~L~~l~ls~N~-l~~~ 679 (1048)
..++.|+.+++++|+ ++|.
T Consensus 288 -~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp -TTGGGSCGGGTCSSSEEEST
T ss_pred -ccccccChHHhcCCCCccCC
Confidence 889999999999998 6664
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=4.1e-33 Score=312.71 Aligned_cols=234 Identities=11% Similarity=0.081 Sum_probs=174.1
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCc-------ccchhhHHHHHHhhcc---------cCceeeEeeE---
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE-------IGINQKGFVSEITEIR---------HRNIVKFYGF--- 841 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-------~~~~~~~~~~~l~~l~---------h~niv~~~~~--- 841 (1048)
...||+|+||+||+|++ +++.||||++....... ......+++..++.++ ||||+++.+.
T Consensus 25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 45689999999999998 58999999997654221 1122344555555554 6666665554
Q ss_pred --------------eee-------------CCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHH-
Q 045493 842 --------------CSH-------------TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMH- 893 (1048)
Q Consensus 842 --------------~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH- 893 (1048)
+.+ .+..|+||||+++|++.+.+.+ ..+++..+..++.||+.||+|||
T Consensus 104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~ 179 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASLAVAEA 179 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 332 6789999999999976666633 34789999999999999999999
Q ss_pred hCCCCCeEeeCCCCCCeEECCCC--------------------ceEEeccccccccCCCCCCcccccccccccccccccc
Q 045493 894 HDCFPPILHRDISSKKVLLDLEY--------------------KAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT 953 (1048)
Q Consensus 894 ~~~~~~iiH~Dik~~NIll~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 953 (1048)
+. +|+||||||+|||++.++ .+||+|||+|+..... ..+||+.|||||++.+
T Consensus 180 ~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 180 SL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCSGGGCC
T ss_pred hC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccChhhhcC
Confidence 88 999999999999999887 8999999999876532 3479999999999987
Q ss_pred CCCCchhhHHHHHHH-HHHHHhCCCCCcccccccCCCcccccchhhhhhhc---cCCCCCCchhHHHHHHHHHHHHHhcc
Q 045493 954 MRANEKCDVFNFGVL-VLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLI---DSRLPPPLGEVEEKLKSMIAVAFLCL 1029 (1048)
Q Consensus 954 ~~~~~~~Dvws~Gvv-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~cl 1029 (1048)
.. +.++||||+|++ .+++++|..||..... .......+. ................++.+++.+||
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW----------LHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH----------HHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcchhh----------hhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHh
Confidence 66 899999998777 7888899999642110 001111111 11112223334567788999999999
Q ss_pred CCCCCCCCCHHHHH
Q 045493 1030 DANPDCRPTMQKVC 1043 (1048)
Q Consensus 1030 ~~dP~~RPt~~evl 1043 (1048)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 999998
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.5e-31 Score=299.33 Aligned_cols=266 Identities=21% Similarity=0.255 Sum_probs=172.1
Q ss_pred cceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcC
Q 045493 402 LNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSN 481 (1048)
Q Consensus 402 L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~ 481 (1048)
++.|++++|++++..|..+..+++|++|++++|.+++..|..|..+++|++|++++|+++.++...+ ++|++|++++
T Consensus 56 l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~---~~L~~L~l~~ 132 (332)
T 2ft3_A 56 TTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP---SSLVELRIHD 132 (332)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCC---TTCCEEECCS
T ss_pred CeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcccc---ccCCEEECCC
Confidence 3334444444433334444444555555555555555555566666666666666666665554443 5666666666
Q ss_pred CcccCcccccccCCCCccEEEecCcccC--cccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCC
Q 045493 482 NNFFGEISSNWIKCPQLATLNMGGNEIS--GTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGD 559 (1048)
Q Consensus 482 n~l~~~~~~~~~~~~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 559 (1048)
|+++...+..|..+++|++|++++|.++ +..+..+..+ +|++|++++|++++ +|..+. ++|++|++++|.+++.
T Consensus 133 n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~ 208 (332)
T 2ft3_A 133 NRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAI 208 (332)
T ss_dssp SCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCC
T ss_pred CccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCcc
Confidence 6666555555666666777777776664 2455666666 77777777777764 343332 5777777777777766
Q ss_pred CccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCC-
Q 045493 560 IPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICN- 638 (1048)
Q Consensus 560 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~- 638 (1048)
.+..+..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|+.+ +..+..+++|++|++++|+|++..+..|..
T Consensus 209 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~ 287 (332)
T 2ft3_A 209 ELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRV-PAGLPDLKLLQVVYLHTNNITKVGVNDFCPV 287 (332)
T ss_dssp CTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBC-CTTGGGCTTCCEEECCSSCCCBCCTTSSSCS
T ss_pred CHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeec-ChhhhcCccCCEEECCCCCCCccChhHcccc
Confidence 667777777777777777777777777777777777777777777643 344677777888888888877666666654
Q ss_pred -----ccccCeEECCCCccc--CCccccccccCCccEEEeccce
Q 045493 639 -----LESLEYMNLLQNKLS--GPIPSCFRRMHGLSSIDVSYNE 675 (1048)
Q Consensus 639 -----l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~l~ls~N~ 675 (1048)
.++|+.|++++|++. +..|..|..++.|+.+++++|+
T Consensus 288 ~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 288 GFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 356788888888876 5677777788888888887774
No 295
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=6.7e-35 Score=343.03 Aligned_cols=375 Identities=18% Similarity=0.160 Sum_probs=256.2
Q ss_pred CCCcEEEccCceeecccccc-cccccccceeeeccccccC----CCCcchhccCCCCeEeccCCccccCcChhhh-ccC-
Q 045493 304 KSLSHLWLSKTQLSGFIPPS-LGNLSNIRGLYIRENMLYG----SIPEELGRLKSLSQLSLSVNKLNGSIPHCLG-NLS- 376 (1048)
Q Consensus 304 ~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-~l~- 376 (1048)
++|++|++++|+++...... +..+++|+.|++++|.+.. .++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45667777777766443332 5666777777777776653 2344555667777777777777654343333 344
Q ss_pred ---CCcEEEeecccccC----CchhhhhhhcccceeeccccccCCCCCccccc-----CCcccEEEeecccccCCC----
Q 045493 377 ---NLKFFALRENELSG----SIPQEIENMKKLNKYLLFENQFTGYLPQNVCQ-----SGSLTHFSVRNNNFVGPI---- 440 (1048)
Q Consensus 377 ---~L~~L~L~~n~l~~----~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~-----~~~L~~L~l~~N~l~~~~---- 440 (1048)
+|++|+|++|.++. .++..+..+++|+.|++++|++++..+..++. .++|++|++++|.+++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57777777777763 44666667777777777777765443332222 346788888888777643
Q ss_pred CCCcccccccceeEecCCccccCcccccC-----CCCCCCeeeCcCCcccCc----ccccccCCCCccEEEecCcccCcc
Q 045493 441 PRSLQNCTSLYSLRLERNQLTGNISEVFG-----IYPDLELLDLSNNNFFGE----ISSNWIKCPQLATLNMGGNEISGT 511 (1048)
Q Consensus 441 ~~~l~~l~~L~~L~L~~n~l~~~~~~~~~-----~~~~L~~L~Ls~n~l~~~----~~~~~~~~~~L~~L~L~~N~i~~~ 511 (1048)
+..+..+++|++|++++|.++......+. ..++|+.|++++|.+++. .+..+..+++|++|++++|.+++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 45566678888888888888765444443 256888888888888764 355666778888888888888754
Q ss_pred cC-----ccccccCCCcEEEcccCcccCC----cCccccCCCccCEEeecCccccCCCccccccc-----cccceeeccc
Q 045493 512 IP-----SEIGNMTQLHKLDFSSNRLVGQ----IPKQLGKLTSLTSLTLNGNQLSGDIPLELGLL-----AELGYLDLSA 577 (1048)
Q Consensus 512 ~~-----~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~ 577 (1048)
.. ..+..+++|++|++++|++++. ++..+..+++|++|+|++|.+++..+..+... ++|++|++++
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 322 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 322 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCC
Confidence 32 2233578888888888888753 46667778888888888888875444444332 6888888888
Q ss_pred Cccccc----ccccccccccccccccccccccchhhhhhcc-----ccccCeEECCCCcccC----cCCcCcCCccccCe
Q 045493 578 NRLSKL----IPKNLGELRKLHHLNLSNNQFSQEISIQIGK-----LVQLSKLDLSHNSLGG----NIPSEICNLESLEY 644 (1048)
Q Consensus 578 N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~ 644 (1048)
|.++.. .+..+..+++|++|++++|+|++..+..+.. .++|++|+|++|++++ .++..+..+++|++
T Consensus 323 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~ 402 (461)
T 1z7x_W 323 CSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRE 402 (461)
T ss_dssp SCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCE
T ss_pred CCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccE
Confidence 888865 3455667788888888888888776665553 5688888888888885 56777777888888
Q ss_pred EECCCCcccCCccccccc-----cCCccEEEeccceecC
Q 045493 645 MNLLQNKLSGPIPSCFRR-----MHGLSSIDVSYNELQG 678 (1048)
Q Consensus 645 L~L~~N~l~~~~~~~~~~-----l~~L~~l~ls~N~l~~ 678 (1048)
|++++|++++.....+.. ...|+.|++.+|.+..
T Consensus 403 L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 403 LDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp EECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred EECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 888888888654444332 2357788877776644
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=3.8e-31 Score=295.89 Aligned_cols=290 Identities=22% Similarity=0.273 Sum_probs=191.3
Q ss_pred CCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEe
Q 045493 352 KSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSV 431 (1048)
Q Consensus 352 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l 431 (1048)
.+++.++++++.++ .+|..+. ++++.|+|++|.+++..+..|.++++|+.|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L------------------------ 83 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLIL------------------------ 83 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC------------------------
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEEC------------------------
Confidence 35677777777776 4444332 45666666666666544444555444444444
Q ss_pred ecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCc-
Q 045493 432 RNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISG- 510 (1048)
Q Consensus 432 ~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~- 510 (1048)
++|.+++..|..|..+++|++|++++|+++.++...+ ++|+.|++++|++++..+..|..+++|++|++++|.++.
T Consensus 84 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 160 (330)
T 1xku_A 84 INNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS 160 (330)
T ss_dssp CSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGG
T ss_pred CCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCcc
Confidence 4444444445555555666666666666655444433 466666666666666555566666666666666666652
Q ss_pred -ccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccc
Q 045493 511 -TIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLG 589 (1048)
Q Consensus 511 -~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 589 (1048)
..+..+..+++|++|++++|++++ +|..+. ++|++|++++|++++..|..+..+++|++|+|++|+++++.+..+.
T Consensus 161 ~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 237 (330)
T 1xku_A 161 GIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 237 (330)
T ss_dssp GBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG
T ss_pred CcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhcc
Confidence 555667777777777777777764 343332 6777777777777766677777777777888888877777777777
Q ss_pred ccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCC------ccccCeEECCCCcccC--Ccccccc
Q 045493 590 ELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICN------LESLEYMNLLQNKLSG--PIPSCFR 661 (1048)
Q Consensus 590 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~~--~~~~~~~ 661 (1048)
.+++|++|+|++|+|+.+ +..+..+++|++|++++|+|++..+..|+. .++|+.|++++|++.. ..|..|.
T Consensus 238 ~l~~L~~L~L~~N~l~~l-p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~ 316 (330)
T 1xku_A 238 NTPHLRELHLNNNKLVKV-PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 316 (330)
T ss_dssp GSTTCCEEECCSSCCSSC-CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGT
T ss_pred CCCCCCEEECCCCcCccC-ChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccc
Confidence 777888888888877743 445677788888888888888766666653 3678888888888863 5677888
Q ss_pred ccCCccEEEeccce
Q 045493 662 RMHGLSSIDVSYNE 675 (1048)
Q Consensus 662 ~l~~L~~l~ls~N~ 675 (1048)
.++.++.+++++|+
T Consensus 317 ~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 317 CVYVRAAVQLGNYK 330 (330)
T ss_dssp TCCCGGGEEC----
T ss_pred cccceeEEEecccC
Confidence 88888888888884
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=3.4e-31 Score=296.27 Aligned_cols=295 Identities=23% Similarity=0.309 Sum_probs=159.0
Q ss_pred CccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccccccccc
Q 045493 25 QLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALS 104 (1048)
Q Consensus 25 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~ 104 (1048)
+++++++++++++ .+|..+. ++|++|+|++|+++++.+.+|+.+++|++|+|++|+++++.|..|.++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 5566666666665 3443332 356666666666665555556666666666666666665555555555555555555
Q ss_pred ceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCC
Q 045493 105 YNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKN 184 (1048)
Q Consensus 105 ~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~ 184 (1048)
+|+++ .+|..+. ++|++|++++|++ ++..+..|..+++
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l---------------------------------------~~~~~~~~~~l~~ 146 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEI---------------------------------------TKVRKSVFNGLNQ 146 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCC---------------------------------------CBBCHHHHTTCTT
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcc---------------------------------------cccCHhHhcCCcc
Confidence 55555 3333332 4555555555544 4444445555666
Q ss_pred cceeeccccCccc--cCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeec
Q 045493 185 LTFVYLNNNRIVG--SIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYL 262 (1048)
Q Consensus 185 L~~L~L~~n~i~~--~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 262 (1048)
|++|++++|.+.. ..+..|..+++|++|++++|+++ .+|..+. ++|++|++++|.+++..|..|..+++|++|++
T Consensus 147 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 223 (330)
T 1xku_A 147 MIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGL 223 (330)
T ss_dssp CCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEEC
T ss_pred ccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 6666666666542 45555666666666666666665 3443332 55666666666666555556666666666666
Q ss_pred ccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccccccccccceeeeccccccC
Q 045493 263 SHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYG 342 (1048)
Q Consensus 263 ~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 342 (1048)
++|++.+..+..|..+++|++|++++ |.+. .+|..+..+++|++|++++|++++..+..|+...
T Consensus 224 s~n~l~~~~~~~~~~l~~L~~L~L~~-N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~-------------- 287 (330)
T 1xku_A 224 SFNSISAVDNGSLANTPHLRELHLNN-NKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG-------------- 287 (330)
T ss_dssp CSSCCCEECTTTGGGSTTCCEEECCS-SCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS--------------
T ss_pred CCCcCceeChhhccCCCCCCEEECCC-CcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc--------------
Confidence 66666544444444444444433333 2332 3444455555555555555555544444332210
Q ss_pred CCCcchhccCCCCeEeccCCcccc--CcChhhhccCCCcEEEeeccc
Q 045493 343 SIPEELGRLKSLSQLSLSVNKLNG--SIPHCLGNLSNLKFFALRENE 387 (1048)
Q Consensus 343 ~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~l~~l~~L~~L~L~~n~ 387 (1048)
......+|+.|++++|.+.. ..|..|..+.+++.++|++|+
T Consensus 288 ----~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 288 ----YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp ----CCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ----cccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 00123566677777777643 445667777777777777764
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=9.8e-34 Score=333.06 Aligned_cols=353 Identities=22% Similarity=0.202 Sum_probs=288.6
Q ss_pred ccccceeeeccccccCCCCcc-hhccCCCCeEeccCCcccc----CcChhhhccCCCcEEEeecccccCCchhhhh-hhc
Q 045493 327 LSNIRGLYIRENMLYGSIPEE-LGRLKSLSQLSLSVNKLNG----SIPHCLGNLSNLKFFALRENELSGSIPQEIE-NMK 400 (1048)
Q Consensus 327 l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~ 400 (1048)
.++|+.|++++|.++...... +..+++|++|++++|.+++ .++..+..+++|++|+|++|.+.+..+..+. .++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 357899999999987544333 7789999999999999985 3467788889999999999999865555544 355
Q ss_pred ----ccceeeccccccCC----CCCcccccCCcccEEEeecccccCCCCCCcc-----cccccceeEecCCccccCc---
Q 045493 401 ----KLNKYLLFENQFTG----YLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQ-----NCTSLYSLRLERNQLTGNI--- 464 (1048)
Q Consensus 401 ----~L~~l~l~~N~l~~----~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~-----~l~~L~~L~L~~n~l~~~~--- 464 (1048)
+|+.|++++|+++. .++..+..+++|++|++++|.+++..+..+. ..++|++|++++|++++..
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 69999999999985 4577888999999999999999865554433 2567999999999998754
Q ss_pred -ccccCCCCCCCeeeCcCCcccCccccccc-----CCCCccEEEecCcccCcc----cCccccccCCCcEEEcccCcccC
Q 045493 465 -SEVFGIYPDLELLDLSNNNFFGEISSNWI-----KCPQLATLNMGGNEISGT----IPSEIGNMTQLHKLDFSSNRLVG 534 (1048)
Q Consensus 465 -~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~-----~~~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~Ls~N~l~~ 534 (1048)
+..+..+++|+.|++++|.++...+..+. ..++|++|++++|.+++. ++..+..+++|++|++++|++++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 45566779999999999999876554443 366999999999999964 46777889999999999999885
Q ss_pred Cc-----CccccCCCccCEEeecCccccCC----CccccccccccceeecccCccccccccccccc-----ccccccccc
Q 045493 535 QI-----PKQLGKLTSLTSLTLNGNQLSGD----IPLELGLLAELGYLDLSANRLSKLIPKNLGEL-----RKLHHLNLS 600 (1048)
Q Consensus 535 ~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l-----~~L~~L~Ls 600 (1048)
.. +..+..+++|++|++++|.+++. ++..+..+++|++|+|++|+++...+..+... ++|++|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 43 23334689999999999999853 57778889999999999999987666666543 699999999
Q ss_pred cccccchh----hhhhccccccCeEECCCCcccCcCCcCcCC-----ccccCeEECCCCcccC----CccccccccCCcc
Q 045493 601 NNQFSQEI----SIQIGKLVQLSKLDLSHNSLGGNIPSEICN-----LESLEYMNLLQNKLSG----PIPSCFRRMHGLS 667 (1048)
Q Consensus 601 ~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~ 667 (1048)
+|.+++.. +..+..+++|++|||++|++++..+..+.. .++|++|+|++|++++ .++..+..+++|+
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~ 401 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLR 401 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCC
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCcc
Confidence 99998874 445567799999999999998766655543 6799999999999996 7788888999999
Q ss_pred EEEeccceecCC
Q 045493 668 SIDVSYNELQGS 679 (1048)
Q Consensus 668 ~l~ls~N~l~~~ 679 (1048)
+|++++|++++.
T Consensus 402 ~L~l~~N~i~~~ 413 (461)
T 1z7x_W 402 ELDLSNNCLGDA 413 (461)
T ss_dssp EEECCSSSCCHH
T ss_pred EEECCCCCCCHH
Confidence 999999998653
No 299
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.1e-30 Score=317.59 Aligned_cols=424 Identities=14% Similarity=0.108 Sum_probs=275.1
Q ss_pred CccCcCCCCCCeEeccCCccC---CCCCcccc------------cccccceeecccccccCCCchhhhcc-chhhhhhhc
Q 045493 224 PPTAGNLSNLKFLYLHDNRLS---GYIPPKLG------------SFKSLLYLYLSHNQLNGSLPSSFGNL-SSLKHLHVH 287 (1048)
Q Consensus 224 ~~~~~~l~~L~~L~L~~N~l~---~~~p~~~~------------~l~~L~~L~L~~n~l~~~~p~~~~~L-~~L~~L~l~ 287 (1048)
+..+..+++|++|+|+++... +.+|..++ .+++|++|+|++|.+.+..+..+... +
T Consensus 66 ~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~-------- 137 (592)
T 3ogk_B 66 DRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARA-------- 137 (592)
T ss_dssp HHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHG--------
T ss_pred HHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhcc--------
Confidence 344567788999999775421 23333333 56777777777776654333333332 1
Q ss_pred cccccCCCCCcccCCCCCCcEEEccCce-eec-ccccccccccccceeeeccccccCCC----CcchhccCCCCeEeccC
Q 045493 288 NINKLSGSIPKEIGNLKSLSHLWLSKTQ-LSG-FIPPSLGNLSNIRGLYIRENMLYGSI----PEELGRLKSLSQLSLSV 361 (1048)
Q Consensus 288 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~Ls~ 361 (1048)
.+|++|++++|. ++. .++.....+++|+.|+|++|.+.+.. +..+..+++|++|++++
T Consensus 138 ----------------~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~ 201 (592)
T 3ogk_B 138 ----------------DDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYM 201 (592)
T ss_dssp ----------------GGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTT
T ss_pred ----------------ccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeec
Confidence 125555555554 111 01122235566666666666655442 22344567777777777
Q ss_pred Ccccc----CcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeeccccccC---CCCCcccccCCcccEEEeecc
Q 045493 362 NKLNG----SIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFT---GYLPQNVCQSGSLTHFSVRNN 434 (1048)
Q Consensus 362 N~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~---~~~~~~~~~~~~L~~L~l~~N 434 (1048)
|.+++ .++..+.++++|+.|++++|.+.+ +|..+..+++|+.+.++..... ...+..+..+++|+.++++++
T Consensus 202 n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 280 (592)
T 3ogk_B 202 TEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM 280 (592)
T ss_dssp CCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC
T ss_pred cCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCcccc
Confidence 77752 334445667777777777777764 6677777777777777653322 223345566778888888875
Q ss_pred cccCCCCCCcccccccceeEecCCccccCcc-cccCCCCCCCeeeCcCCcccCc-ccccccCCCCccEEEec--------
Q 045493 435 NFVGPIPRSLQNCTSLYSLRLERNQLTGNIS-EVFGIYPDLELLDLSNNNFFGE-ISSNWIKCPQLATLNMG-------- 504 (1048)
Q Consensus 435 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~Ls~n~l~~~-~~~~~~~~~~L~~L~L~-------- 504 (1048)
. ...+|..+..+++|++|++++|.+++... ..+..+++|+.|+++ +.+... .+.....+++|++|+++
T Consensus 281 ~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~ 358 (592)
T 3ogk_B 281 G-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGM 358 (592)
T ss_dssp C-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTT
T ss_pred c-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCcccccc
Confidence 3 33567778888899999999988764433 446788899999998 445433 33334567889999998
Q ss_pred ---CcccCcccCcc-ccccCCCcEEEcccCcccCCcCccccC-CCccCEEeec----CccccCC-----Ccccccccccc
Q 045493 505 ---GNEISGTIPSE-IGNMTQLHKLDFSSNRLVGQIPKQLGK-LTSLTSLTLN----GNQLSGD-----IPLELGLLAEL 570 (1048)
Q Consensus 505 ---~N~i~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~~~~l~~L 570 (1048)
.|.+++..... +..+++|++|+++.|++++..+..+.. +++|++|+++ .|.+++. ++..+..+++|
T Consensus 359 ~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L 438 (592)
T 3ogk_B 359 EDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKL 438 (592)
T ss_dssp SSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTC
T ss_pred ccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCC
Confidence 36676443222 445788999999888888766666665 8889999996 6677753 33446678888
Q ss_pred ceeecccCc--ccccccccccc-cccccccccccccccchhhh-hhccccccCeEECCCCcccCcC-CcCcCCccccCeE
Q 045493 571 GYLDLSANR--LSKLIPKNLGE-LRKLHHLNLSNNQFSQEISI-QIGKLVQLSKLDLSHNSLGGNI-PSEICNLESLEYM 645 (1048)
Q Consensus 571 ~~L~Ls~N~--l~~~~~~~l~~-l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L 645 (1048)
++|++++|. +++..+..+.. +++|++|++++|++++.... .+..+++|++|+|++|.+++.. +..+..+++|++|
T Consensus 439 ~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 518 (592)
T 3ogk_B 439 RRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYL 518 (592)
T ss_dssp CEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEE
T ss_pred CEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCee
Confidence 899987543 66555555543 77888888888888775543 4467888888899888886543 3334567888888
Q ss_pred ECCCCcccCCcccccc-ccCCccEEEeccc
Q 045493 646 NLLQNKLSGPIPSCFR-RMHGLSSIDVSYN 674 (1048)
Q Consensus 646 ~L~~N~l~~~~~~~~~-~l~~L~~l~ls~N 674 (1048)
+|++|++++.....+. .+|.+....+..+
T Consensus 519 ~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 519 WVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp EEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred ECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 8888888876555443 5677766665554
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6e-29 Score=274.87 Aligned_cols=248 Identities=23% Similarity=0.243 Sum_probs=219.8
Q ss_pred EEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccC--CCcCCCCCCCCcEEeCC
Q 045493 3 SINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGI--IPPQIGILTNLVVLRLS 80 (1048)
Q Consensus 3 ~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~--~p~~~~~l~~L~~L~ls 80 (1048)
.|++++. +++++|...++++++|+|++|++++..+..|+.+++|++|+|++|+++.. .|.++..+++|++|+|+
T Consensus 11 ~l~c~~~----~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 11 EIRCNSK----GLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp EEECCSS----CCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred EEEcCCC----CcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 4555554 46788888889999999999999977777789999999999999999833 36778889999999999
Q ss_pred CCcCCCCCccccccccccccccccceecccccC-cCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCC
Q 045493 81 VNQLNGLIPEELGELTSLNELALSYNRLNGSIP-ASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLE 159 (1048)
Q Consensus 81 ~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~-~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~ 159 (1048)
+|++++ +|..+.++++|++|++++|+++...+ ..+..+++|++|++++|.+.+. .|..+..++
T Consensus 87 ~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~---------------~~~~~~~l~ 150 (306)
T 2z66_A 87 FNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA---------------FNGIFNGLS 150 (306)
T ss_dssp SCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEEC---------------STTTTTTCT
T ss_pred CCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCcc---------------chhhcccCc
Confidence 999996 67779999999999999999997665 6899999999999999998753 345677889
Q ss_pred CCcEEecCCCcccc-ccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEec
Q 045493 160 SPVSVSLHTNNFSG-VIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYL 238 (1048)
Q Consensus 160 ~L~~l~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 238 (1048)
+|++|++++|.+++ ..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|++|+|
T Consensus 151 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 230 (306)
T 2z66_A 151 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 230 (306)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEEC
T ss_pred CCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeEC
Confidence 99999999999987 68999999999999999999999888999999999999999999999777778899999999999
Q ss_pred cCCccCCCCCccccccc-ccceeecccccccCC
Q 045493 239 HDNRLSGYIPPKLGSFK-SLLYLYLSHNQLNGS 270 (1048)
Q Consensus 239 ~~N~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~ 270 (1048)
++|.+++..|..+..++ +|++|++++|++...
T Consensus 231 ~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 231 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp TTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 99999988888999984 999999999999854
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.9e-31 Score=322.57 Aligned_cols=459 Identities=14% Similarity=0.076 Sum_probs=304.1
Q ss_pred cCCcccccccccceecccccccc---ccCCccCc------------CCCCCCeEeccCCccCCCCCcccccc--ccccee
Q 045493 198 SIPSEIGNLRSLSYLGLNKNQLS---GSIPPTAG------------NLSNLKFLYLHDNRLSGYIPPKLGSF--KSLLYL 260 (1048)
Q Consensus 198 ~~p~~~~~l~~L~~L~L~~n~l~---~~~~~~~~------------~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L 260 (1048)
..+..+..+++|++|+|+++... +.+|..++ .+++|++|+|++|.+++..+..+... .+|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 34455678899999999886531 23443333 68999999999999886666666663 449999
Q ss_pred ecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecc----cccccccccccceeeec
Q 045493 261 YLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGF----IPPSLGNLSNIRGLYIR 336 (1048)
Q Consensus 261 ~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~ 336 (1048)
++++|.-. .+..+. ....++++|++|+|++|.+++. ++..+..+++|+.|+++
T Consensus 144 ~L~~~~~~--~~~~l~---------------------~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~ 200 (592)
T 3ogk_B 144 KLDKCSGF--TTDGLL---------------------SIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFY 200 (592)
T ss_dssp EEESCEEE--EHHHHH---------------------HHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECT
T ss_pred ECcCCCCc--CHHHHH---------------------HHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEee
Confidence 99998721 111111 1112345677777777766544 23334556777777777
Q ss_pred cccccCC----CCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeeccccc---CCchhhhhhhcccceeeccc
Q 045493 337 ENMLYGS----IPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELS---GSIPQEIENMKKLNKYLLFE 409 (1048)
Q Consensus 337 ~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~---~~~p~~~~~l~~L~~l~l~~ 409 (1048)
+|.+++. ++..+..+++|++|++++|.+.+ +|..+.++++|+.|+++.+... +..+..+..+++|+.+.+++
T Consensus 201 ~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~ 279 (592)
T 3ogk_B 201 MTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSY 279 (592)
T ss_dssp TCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETT
T ss_pred ccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccc
Confidence 7776522 23344567777888887777774 5677777778888777753322 23334556667777777776
Q ss_pred cccCCCCCcccccCCcccEEEeecccccCCCC-CCcccccccceeEecCCcccc-CcccccCCCCCCCeeeCcC------
Q 045493 410 NQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIP-RSLQNCTSLYSLRLERNQLTG-NISEVFGIYPDLELLDLSN------ 481 (1048)
Q Consensus 410 N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~~~~L~~L~Ls~------ 481 (1048)
+. .+.+|..+..+++|++|++++|.+++... ..+..+++|++|+++ +.+.. .....+..+++|+.|++++
T Consensus 280 ~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~ 357 (592)
T 3ogk_B 280 MG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQG 357 (592)
T ss_dssp CC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSST
T ss_pred cc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccc
Confidence 43 33456666677788888888887654333 335778889999998 44432 2334445678899999993
Q ss_pred -----CcccCccccc-ccCCCCccEEEecCcccCcccCccccc-cCCCcEEEcc----cCcccCC-----cCccccCCCc
Q 045493 482 -----NNFFGEISSN-WIKCPQLATLNMGGNEISGTIPSEIGN-MTQLHKLDFS----SNRLVGQ-----IPKQLGKLTS 545 (1048)
Q Consensus 482 -----n~l~~~~~~~-~~~~~~L~~L~L~~N~i~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~-----~~~~~~~l~~ 545 (1048)
|.+++..... ...+++|++|+++.|.+++..+..++. +++|+.|+++ .|++++. ++..+.++++
T Consensus 358 ~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~ 437 (592)
T 3ogk_B 358 MEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKK 437 (592)
T ss_dssp TSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTT
T ss_pred cccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCC
Confidence 5666443322 446899999999999999877777765 8999999996 7788764 3334677899
Q ss_pred cCEEeecCcc--ccCCCccccc-cccccceeecccCccccc-ccccccccccccccccccccccchhhhh-hccccccCe
Q 045493 546 LTSLTLNGNQ--LSGDIPLELG-LLAELGYLDLSANRLSKL-IPKNLGELRKLHHLNLSNNQFSQEISIQ-IGKLVQLSK 620 (1048)
Q Consensus 546 L~~L~L~~N~--l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~ 620 (1048)
|++|++++|. +++..+..+. .+++|++|+|++|++++. .+..+..+++|++|++++|.+++..... ...+++|++
T Consensus 438 L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 517 (592)
T 3ogk_B 438 LRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRY 517 (592)
T ss_dssp CCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCE
T ss_pred CCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCe
Confidence 9999998543 6654444444 478999999999999863 3455678899999999999997765444 457899999
Q ss_pred EECCCCcccCcCCcCcC-CccccCeEECCCCcccCCccc-cccccCCccEEEeccceecCCCCCc
Q 045493 621 LDLSHNSLGGNIPSEIC-NLESLEYMNLLQNKLSGPIPS-CFRRMHGLSSIDVSYNELQGSIPHS 683 (1048)
Q Consensus 621 L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~l~ls~N~l~~~~p~~ 683 (1048)
|+|++|++++.....+. .+|.+....+..++-....|. .-........+ ..+|.+.|+.|+.
T Consensus 518 L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~ 581 (592)
T 3ogk_B 518 LWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHI-LAYYSLAGQRTDC 581 (592)
T ss_dssp EEEESCBCCTTCTTGGGGCCTTEEEEEECCC---------------CCCEE-EEEECTTCSCSCC
T ss_pred eECcCCcCCHHHHHHHHHhCCCcEEEEecCccccccccccCCcCCcchhhe-EeeeecCCCccCC
Confidence 99999999876555554 567777777666533221111 01112223333 2355567776654
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=9.6e-29 Score=273.25 Aligned_cols=252 Identities=23% Similarity=0.272 Sum_probs=210.8
Q ss_pred cEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcc--cccccCCCCccEEEec
Q 045493 427 THFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEI--SSNWIKCPQLATLNMG 504 (1048)
Q Consensus 427 ~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~--~~~~~~~~~L~~L~L~ 504 (1048)
+.++.+++.++. +|..+. ++|++|++++|+++.++...|..+++|+.|+|++|+++... +..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCccc-CCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 466777777764 343332 57888888888888888888888888888888888887432 5566678889999999
Q ss_pred CcccCcccCccccccCCCcEEEcccCcccCCcC-ccccCCCccCEEeecCccccCCCccccccccccceeecccCcccc-
Q 045493 505 GNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIP-KQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSK- 582 (1048)
Q Consensus 505 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~- 582 (1048)
+|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+..+..+++|++|++++|++++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 99888 466678889999999999999886655 578888999999999999988888888889999999999999887
Q ss_pred cccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccc
Q 045493 583 LIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRR 662 (1048)
Q Consensus 583 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 662 (1048)
..|..+..+++|++|++++|+|++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|++++..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 56888888999999999999998888888889999999999999998877778888999999999999999988988888
Q ss_pred cC-CccEEEeccceecCCCCC
Q 045493 663 MH-GLSSIDVSYNELQGSIPH 682 (1048)
Q Consensus 663 l~-~L~~l~ls~N~l~~~~p~ 682 (1048)
++ .|++|++++|++++.++.
T Consensus 246 ~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp CCTTCCEEECTTCCEECSGGG
T ss_pred hhccCCEEEccCCCeecccCh
Confidence 85 899999999999887653
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=285.36 Aligned_cols=283 Identities=18% Similarity=0.178 Sum_probs=144.1
Q ss_pred ccCCCcEEEeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCccccccccee
Q 045493 374 NLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSL 453 (1048)
Q Consensus 374 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L 453 (1048)
.++.....++++|.++ .+|..+. ++|+.|++++|++++..+..+..+++|++|++++|.+++..+..|.++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 3444455666666666 3444332 245555555555554444444444555555555555544444444455555555
Q ss_pred EecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccC-cc
Q 045493 454 RLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSN-RL 532 (1048)
Q Consensus 454 ~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N-~l 532 (1048)
++++|++++++...|..+++|++|++++|+++..... ..|..+++|++|++++| .+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~-----------------------~~~~~l~~L~~L~l~~n~~~ 162 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGET-----------------------SLFSHLTKLQILRVGNMDTF 162 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSS-----------------------CSCTTCTTCCEEEEEESSSC
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCch-----------------------hhhccCCCCcEEECCCCccc
Confidence 5555555444444444444555555555544433220 24444445555555544 23
Q ss_pred cCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhh
Q 045493 533 VGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQI 612 (1048)
Q Consensus 533 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 612 (1048)
.+..+..|..+++|++|++++|++++..|..+..+++|++|++++|+++.+.+..+..+++|+.|++++|++++.....+
T Consensus 163 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 242 (353)
T 2z80_A 163 TKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSEL 242 (353)
T ss_dssp CEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC--
T ss_pred cccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccc
Confidence 33334444444555555555555544444444555555555555555444433333344555555555555544332222
Q ss_pred c---cccccCeEECCCCcccC----cCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCC
Q 045493 613 G---KLVQLSKLDLSHNSLGG----NIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682 (1048)
Q Consensus 613 ~---~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~ 682 (1048)
. ....++.+++++|.+++ .+|..+..+++|++|+|++|+|+...+..|..+++|++|++++|+++|.+|.
T Consensus 243 ~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 243 STGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp ----CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 1 23445555555555554 3455566667777777777777744444456777777777777777776653
No 304
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.9e-28 Score=267.80 Aligned_cols=223 Identities=25% Similarity=0.255 Sum_probs=150.1
Q ss_pred EEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCC
Q 045493 3 SINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVN 82 (1048)
Q Consensus 3 ~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n 82 (1048)
.+++++.+ ++++|...++++++|+|++|+|++..+..|+.+++|++|+|++|.++++.|.+|+.+++|++|++++|
T Consensus 15 ~~~c~~~~----l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 15 TTSCPQQG----LQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp EEECCSSC----CSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred EEEcCcCC----cccCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45565544 45677777888999999999888777788888888999999998888877888888888999999888
Q ss_pred c-CCCCCccccccccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCC
Q 045493 83 Q-LNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESP 161 (1048)
Q Consensus 83 ~-l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L 161 (1048)
+ ++.+.|..|..+++|++|++++|++++..|..|.++++|++|++++|++++.. +..+..+++|
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---------------~~~~~~l~~L 155 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP---------------DDTFRDLGNL 155 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC---------------TTTTTTCTTC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccC---------------HhHhccCCCc
Confidence 7 88777888888888888888888888777888888888888888888776321 1223444455
Q ss_pred cEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCC
Q 045493 162 VSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDN 241 (1048)
Q Consensus 162 ~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 241 (1048)
+.|++++|.+++..+..|..+++|+.|++++|++++..|..|..+++|++|+|++|++++..+..+..+++|++|+|++|
T Consensus 156 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 235 (285)
T 1ozn_A 156 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235 (285)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSS
T ss_pred cEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCC
Confidence 55555555555444444555555555555555554444444444444555555555444333333444444444444444
Q ss_pred ccC
Q 045493 242 RLS 244 (1048)
Q Consensus 242 ~l~ 244 (1048)
.+.
T Consensus 236 ~~~ 238 (285)
T 1ozn_A 236 PWV 238 (285)
T ss_dssp CEE
T ss_pred Ccc
Confidence 444
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3e-28 Score=284.63 Aligned_cols=239 Identities=23% Similarity=0.209 Sum_probs=213.1
Q ss_pred eecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccc
Q 045493 14 TLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELG 93 (1048)
Q Consensus 14 ~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~ 93 (1048)
+++++|...++++++|+|++|+|++..|..|+.+++|++|+|++|+|+++.|.+|.++++|++|+|++|+|+++.+..|.
T Consensus 65 ~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 144 (452)
T 3zyi_A 65 GLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFE 144 (452)
T ss_dssp CCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSS
T ss_pred CcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhc
Confidence 45778888889999999999999999999999999999999999999998889999999999999999999988888899
Q ss_pred cccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCcccc
Q 045493 94 ELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSG 173 (1048)
Q Consensus 94 ~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~ 173 (1048)
.+++|++|+|++|+++.+.+..|.++++|+.|++++|..-+.++ +..+.++++|+.|++++|++++
T Consensus 145 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~--------------~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 145 YLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYIS--------------EGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp SCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC--------------TTTTTTCTTCCEEECTTSCCSS
T ss_pred ccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccC--------------hhhccCCCCCCEEECCCCcccc
Confidence 99999999999999998888899999999999999854332222 2357788899999999999987
Q ss_pred ccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCccccc
Q 045493 174 VIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGS 253 (1048)
Q Consensus 174 ~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 253 (1048)
. ..+..+++|+.|+|++|++++..|..|.++++|++|+|++|++.+..+..|.++++|++|+|++|++++..+..|..
T Consensus 211 ~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 M--PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp C--CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred c--ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 5 35889999999999999999888999999999999999999999888888999999999999999999777778889
Q ss_pred ccccceeeccccccc
Q 045493 254 FKSLLYLYLSHNQLN 268 (1048)
Q Consensus 254 l~~L~~L~L~~n~l~ 268 (1048)
+++|+.|+|++|++.
T Consensus 289 l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 289 LRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred ccCCCEEEccCCCcC
Confidence 999999999999876
No 306
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=9.6e-29 Score=279.06 Aligned_cols=286 Identities=17% Similarity=0.177 Sum_probs=226.4
Q ss_pred hhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCccc
Q 045493 348 LGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLT 427 (1048)
Q Consensus 348 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~ 427 (1048)
-..++.....++++|.++ .+|..+. ++|++|++++|.+++..+..+.++++|+.|++++|++++..|..+..+++|+
T Consensus 27 ~~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (353)
T 2z80_A 27 SLSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 103 (353)
T ss_dssp CCEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCC
Confidence 345666777999999999 5666554 5899999999999977777999999999999999999998888999999999
Q ss_pred EEEeecccccCCCCCCcccccccceeEecCCccccCcc-cccCCCCCCCeeeCcCC-cccCcccccccCCCCccEEEecC
Q 045493 428 HFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNIS-EVFGIYPDLELLDLSNN-NFFGEISSNWIKCPQLATLNMGG 505 (1048)
Q Consensus 428 ~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~Ls~n-~l~~~~~~~~~~~~~L~~L~L~~ 505 (1048)
+|++++|.+++..+..|..+++|++|++++|++++++. ..|..+++|+.|++++| .+....+..|..+++|++|++++
T Consensus 104 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 104 HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp EEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred EEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCC
Confidence 99999999998777779999999999999999998887 78999999999999998 46666677788888888888888
Q ss_pred cccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccc
Q 045493 506 NEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIP 585 (1048)
Q Consensus 506 N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 585 (1048)
|.+++..|..+..+++|++|++++|+++......+..+++|++|++++|.+++..+..+...
T Consensus 184 n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~------------------ 245 (353)
T 2z80_A 184 SDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTG------------------ 245 (353)
T ss_dssp TTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-----------------------
T ss_pred CCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccc------------------
Confidence 88887778888888888888888888764444444557788888888888775443332211
Q ss_pred ccccccccccccccccccccc----hhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCcc
Q 045493 586 KNLGELRKLHHLNLSNNQFSQ----EISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIP 657 (1048)
Q Consensus 586 ~~l~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 657 (1048)
.....++.++|++|.+++ ..+..+..+++|++|||++|+|+...+..|..+++|++|+|++|++++..|
T Consensus 246 ---~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 246 ---ETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ----CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ---cccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 112334444444444443 235567889999999999999995444446899999999999999997654
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.9e-28 Score=281.86 Aligned_cols=240 Identities=23% Similarity=0.218 Sum_probs=209.2
Q ss_pred eeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccc
Q 045493 13 GTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEEL 92 (1048)
Q Consensus 13 ~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~ 92 (1048)
..++++|...++++++|+|++|+|++..+..|+.+++|++|+|++|+|+++.+.+|.++++|++|+|++|+|+++.+..|
T Consensus 53 ~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 132 (440)
T 3zyj_A 53 KNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAF 132 (440)
T ss_dssp CCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTS
T ss_pred CCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHh
Confidence 34678888888999999999999998888999999999999999999998888899999999999999999998888889
Q ss_pred ccccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccc
Q 045493 93 GELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFS 172 (1048)
Q Consensus 93 ~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~ 172 (1048)
..+++|++|++++|+++.+.+..|.++++|+.|++++|...+.++ +..+.++++|+.|++++|.++
T Consensus 133 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~--------------~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 133 VYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYIS--------------EGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp CSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC--------------TTTTTTCSSCCEEECTTSCCS
T ss_pred hccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeC--------------cchhhcccccCeecCCCCcCc
Confidence 999999999999999998888899999999999999854332222 235778888999999999988
Q ss_pred cccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccc
Q 045493 173 GVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLG 252 (1048)
Q Consensus 173 ~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 252 (1048)
.+ | .+..+++|+.|+|++|+++++.|..|.++++|++|+|++|++.+..+..|.++++|++|+|++|++++..+..|.
T Consensus 199 ~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 276 (440)
T 3zyj_A 199 EI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 276 (440)
T ss_dssp SC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTS
T ss_pred cc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhc
Confidence 55 3 588889999999999999888888999999999999999999888888888999999999999999977777888
Q ss_pred cccccceeeccccccc
Q 045493 253 SFKSLLYLYLSHNQLN 268 (1048)
Q Consensus 253 ~l~~L~~L~L~~n~l~ 268 (1048)
.+++|+.|+|++|++.
T Consensus 277 ~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 277 PLHHLERIHLHHNPWN 292 (440)
T ss_dssp SCTTCCEEECCSSCEE
T ss_pred cccCCCEEEcCCCCcc
Confidence 8999999999999875
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=8.1e-28 Score=280.00 Aligned_cols=250 Identities=24% Similarity=0.242 Sum_probs=166.1
Q ss_pred cEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCc
Q 045493 427 THFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGN 506 (1048)
Q Consensus 427 ~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N 506 (1048)
..++.+++.++. +|..+. ++++.|+|++|+++.+.+..|..+++|+.|+|++|+++...+..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLRE-VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCSS-CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcCc-CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 445555555542 333332 45666666666666666666666666666666666666655666666666666666666
Q ss_pred ccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecC-ccccCCCccccccccccceeecccCccccccc
Q 045493 507 EISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNG-NQLSGDIPLELGLLAELGYLDLSANRLSKLIP 585 (1048)
Q Consensus 507 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 585 (1048)
.|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++ |.++...+..|..+++|++|+|++|+|+.+.
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~- 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP- 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC-
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc-
Confidence 66655555666666666666666666655555666666666676666 3344333345666677777777777776552
Q ss_pred ccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCC
Q 045493 586 KNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHG 665 (1048)
Q Consensus 586 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 665 (1048)
.+..+++|++|+|++|+|+++.+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..++.
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred -ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccC
Confidence 3666677777777777777776777777777777777777777777777777777777777777777777777777777
Q ss_pred ccEEEeccceecCCCC
Q 045493 666 LSSIDVSYNELQGSIP 681 (1048)
Q Consensus 666 L~~l~ls~N~l~~~~p 681 (1048)
|+.|++++|+|.+.+.
T Consensus 281 L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 281 LERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCEEECCSSCEECSST
T ss_pred CCEEEcCCCCccCCCC
Confidence 7777777777776554
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=9.1e-28 Score=280.61 Aligned_cols=250 Identities=20% Similarity=0.206 Sum_probs=155.6
Q ss_pred cEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCc
Q 045493 427 THFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGN 506 (1048)
Q Consensus 427 ~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N 506 (1048)
..++.+++.++. +|..+. +++++|+|++|+|+++.+..|..+++|+.|+|++|++++..+..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 344444444442 333222 35566666666666665566666666666666666666555556666666666666666
Q ss_pred ccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecC-ccccCCCccccccccccceeecccCccccccc
Q 045493 507 EISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNG-NQLSGDIPLELGLLAELGYLDLSANRLSKLIP 585 (1048)
Q Consensus 507 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 585 (1048)
.|++..+..|..+++|++|+|++|++++..+..|..+++|++|++++ |.++...+..|..+++|++|+|++|+|+++
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-- 211 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-- 211 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC--
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc--
Confidence 66655555566666666666666666655555566666666666666 334433333566666666666666666654
Q ss_pred ccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCC
Q 045493 586 KNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHG 665 (1048)
Q Consensus 586 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 665 (1048)
..+..+++|++|+|++|+|+++.+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++
T Consensus 212 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 291 (452)
T 3zyi_A 212 PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 291 (452)
T ss_dssp CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTT
T ss_pred ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccC
Confidence 23556666667777777766666666667777777777777777666666777777777777777777666666677777
Q ss_pred ccEEEeccceecCCCC
Q 045493 666 LSSIDVSYNELQGSIP 681 (1048)
Q Consensus 666 L~~l~ls~N~l~~~~p 681 (1048)
|+.|++++|+|.+.+.
T Consensus 292 L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 292 LVELHLHHNPWNCDCD 307 (452)
T ss_dssp CCEEECCSSCEECSTT
T ss_pred CCEEEccCCCcCCCCC
Confidence 7777777777766554
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=6.1e-28 Score=263.77 Aligned_cols=211 Identities=23% Similarity=0.245 Sum_probs=128.4
Q ss_pred CCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCc-ccCCcCccccCCCccCEEe
Q 045493 472 PDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNR-LVGQIPKQLGKLTSLTSLT 550 (1048)
Q Consensus 472 ~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~ 550 (1048)
++|+.|++++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|+ +++..+..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 345555555555554444455555555555555555555555555555566666666654 5544455555566666666
Q ss_pred ecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccC
Q 045493 551 LNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGG 630 (1048)
Q Consensus 551 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 630 (1048)
+++|.+++..|..+..+++|++|++++|+++.+.+..|..+++|++|+|++|+|+++.+..+..+++|++|++++|++++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 66666655555555666666666666666665555556666666666666666666555556666666666666666666
Q ss_pred cCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCC
Q 045493 631 NIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682 (1048)
Q Consensus 631 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~ 682 (1048)
..|..|..+++|++|++++|++++..+..+..++.|++|++++|+|.+.++.
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 6666666666677777777766666666666666677777777766665543
No 311
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=5.7e-28 Score=268.76 Aligned_cols=229 Identities=24% Similarity=0.286 Sum_probs=139.8
Q ss_pred CCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccc
Q 045493 24 PQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELAL 103 (1048)
Q Consensus 24 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l 103 (1048)
+++++|||++|+++ .+|..++.+++|++|+|++|.++ .+|..|+.+++|++|+|++|+++ .+|..|..+++|++|++
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 45555555555555 44555555555555555555555 45555555555555555555555 34555555555555555
Q ss_pred cceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCC
Q 045493 104 SYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLK 183 (1048)
Q Consensus 104 ~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~ 183 (1048)
++|++.+..|..+.. ..++..+.++++|+.|++++|.++ .+|..+..++
T Consensus 158 ~~n~~~~~~p~~~~~------------------------------~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~ 206 (328)
T 4fcg_A 158 RACPELTELPEPLAS------------------------------TDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQ 206 (328)
T ss_dssp EEETTCCCCCSCSEE------------------------------EC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCT
T ss_pred CCCCCccccChhHhh------------------------------ccchhhhccCCCCCEEECcCCCcC-cchHhhcCCC
Confidence 555555555544432 011122333445555555555555 4455666677
Q ss_pred CcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeecc
Q 045493 184 NLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLS 263 (1048)
Q Consensus 184 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 263 (1048)
+|++|+|++|+++ .+|..+..+++|++|+|++|.+.+.+|..++.+++|++|+|++|.+.+.+|..+..+++|++|+++
T Consensus 207 ~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 285 (328)
T 4fcg_A 207 NLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLR 285 (328)
T ss_dssp TCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECT
T ss_pred CCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCC
Confidence 7777777777776 345567777777777777777766777777777777777777777766777777777777777777
Q ss_pred cccccCCCchhhhccchhhhhhhc
Q 045493 264 HNQLNGSLPSSFGNLSSLKHLHVH 287 (1048)
Q Consensus 264 ~n~l~~~~p~~~~~L~~L~~L~l~ 287 (1048)
+|++.+.+|..++.+++|+.+++.
T Consensus 286 ~n~~~~~iP~~l~~L~~L~~l~l~ 309 (328)
T 4fcg_A 286 GCVNLSRLPSLIAQLPANCIILVP 309 (328)
T ss_dssp TCTTCCCCCGGGGGSCTTCEEECC
T ss_pred CCCchhhccHHHhhccCceEEeCC
Confidence 777777777777777777776664
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6e-29 Score=275.87 Aligned_cols=246 Identities=20% Similarity=0.195 Sum_probs=182.7
Q ss_pred CcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEe
Q 045493 424 GSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNM 503 (1048)
Q Consensus 424 ~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L 503 (1048)
++|++|++++|.+++..|..|..+++|++|++++|++++..+ |..+++|++|++++|++++.. ..++|++|++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l 106 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA 106 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEEC
Confidence 345555555555555555566666666777777776665543 666777777777777776433 2367777777
Q ss_pred cCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCcccc-ccccccceeecccCcccc
Q 045493 504 GGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLEL-GLLAELGYLDLSANRLSK 582 (1048)
Q Consensus 504 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~ 582 (1048)
++|.+++..+.. +++|++|++++|++++..+..+..+++|++|+|++|.+++..+..+ ..+++|++|+|++|+|+.
T Consensus 107 ~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 183 (317)
T 3o53_A 107 ANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (317)
T ss_dssp CSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc
Confidence 777777554433 5678888888888887777777788888888888888876656655 467888888888888887
Q ss_pred cccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCccc-CCcccccc
Q 045493 583 LIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLS-GPIPSCFR 661 (1048)
Q Consensus 583 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~ 661 (1048)
+.+ ...+++|++|+|++|+|+++.+. +..+++|++|+|++|+|+ .+|..+..+++|+.|++++|+++ +..+..+.
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 184 VKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred ccc--ccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 632 33478888899999988876554 888899999999999998 56778889999999999999998 77888899
Q ss_pred ccCCccEEEec-cceecCCCCCc
Q 045493 662 RMHGLSSIDVS-YNELQGSIPHS 683 (1048)
Q Consensus 662 ~l~~L~~l~ls-~N~l~~~~p~~ 683 (1048)
.++.|+.++++ .+.++|..|..
T Consensus 260 ~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 260 KNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp TCHHHHHHHHHHHHHHHSSSSCC
T ss_pred ccccceEEECCCchhccCCchhc
Confidence 99999999999 45577776653
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.1e-28 Score=272.97 Aligned_cols=249 Identities=20% Similarity=0.207 Sum_probs=195.5
Q ss_pred ccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccC-cccccC-------CCCCCCeeeCcCCcccCcccccc
Q 045493 421 CQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGN-ISEVFG-------IYPDLELLDLSNNNFFGEISSNW 492 (1048)
Q Consensus 421 ~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~-------~~~~L~~L~Ls~n~l~~~~~~~~ 492 (1048)
+..++|+.|++++|.+ .+|..+... |+.|++++|.++.. .+..+. .+++|++|+|++|++++..|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 4445566666666666 445444433 77778888777532 222222 57888888888888888777765
Q ss_pred --cCCCCccEEEecCcccCcccCcccccc-----CCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCC--Cccc
Q 045493 493 --IKCPQLATLNMGGNEISGTIPSEIGNM-----TQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGD--IPLE 563 (1048)
Q Consensus 493 --~~~~~L~~L~L~~N~i~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~ 563 (1048)
..+++|++|++++|.+++. |..++.+ ++|++|+|++|++++..+..|..+++|++|+|++|++.+. .+..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 7888999999999999876 7777777 8899999999999988888899999999999999997754 2334
Q ss_pred c--ccccccceeecccCccccc---ccccccccccccccccccccccchhh-hhhccccccCeEECCCCcccCcCCcCcC
Q 045493 564 L--GLLAELGYLDLSANRLSKL---IPKNLGELRKLHHLNLSNNQFSQEIS-IQIGKLVQLSKLDLSHNSLGGNIPSEIC 637 (1048)
Q Consensus 564 ~--~~l~~L~~L~Ls~N~l~~~---~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 637 (1048)
+ ..+++|++|+|++|+|+++ ....+..+++|++|+|++|+|++..+ ..+..+++|++|+|++|+|+ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 4 7889999999999999843 23445677899999999999988663 45667899999999999998 7777776
Q ss_pred CccccCeEECCCCcccCCccccccccCCccEEEeccceecCC
Q 045493 638 NLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGS 679 (1048)
Q Consensus 638 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~ 679 (1048)
++|++|+|++|+|++. |. +..++.|++|++++|++++.
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred --CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 8999999999999977 55 88999999999999999774
No 314
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=7.8e-27 Score=259.59 Aligned_cols=224 Identities=21% Similarity=0.261 Sum_probs=159.6
Q ss_pred ccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcc
Q 045493 449 SLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFS 528 (1048)
Q Consensus 449 ~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 528 (1048)
+++.|+|++|.++.++.. +..+++|++|+|++|.++ .+|..+..+++|++|++++|.++ .+|..++.+++|++|+|+
T Consensus 82 ~l~~L~L~~n~l~~lp~~-l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLPQFPDQ-AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCSSCCSC-GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCchhcChh-hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 444455555554433332 233455555555555554 44455555556666666666665 455556666666666666
Q ss_pred cCcccCCcCcccc---------CCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccccccccccc
Q 045493 529 SNRLVGQIPKQLG---------KLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNL 599 (1048)
Q Consensus 529 ~N~l~~~~~~~~~---------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 599 (1048)
+|++.+.+|..+. ++++|++|+|++|+++ .+|..++.+++|++|+|++|+++++ |..+..+++|++|+|
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l-~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSAL-GPAIHHLPKLEELDL 236 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCC-CGGGGGCTTCCEEEC
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcC-chhhccCCCCCEEEC
Confidence 6555555555444 4788888888888887 6777788888888888888888875 446788888888888
Q ss_pred ccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceec
Q 045493 600 SNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQ 677 (1048)
Q Consensus 600 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~ 677 (1048)
++|++.+..+..++.+++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..+..++.|+.+++..|.+.
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 888888777778888888888888888888888888888899999999999988889999999999999988877553
No 315
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=3.6e-28 Score=288.89 Aligned_cols=186 Identities=16% Similarity=0.077 Sum_probs=127.8
Q ss_pred ecccccccEEEEEE-cCCCceeeEEeccCCCCcc------cc---hhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEE
Q 045493 784 HGTGGCGTVYKAEL-TSGDTRAVKKLHSLPTGEI------GI---NQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVY 852 (1048)
Q Consensus 784 lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~------~~---~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 852 (1048)
.+.|++|.+..++. ..|+.++||.+........ .. ...+|+..++++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 46677777776643 3689999999875432211 11 123345556666 6999999999999999999999
Q ss_pred EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493 853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD 932 (1048)
Q Consensus 853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 932 (1048)
||++||+|.+++.+.+ +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|++||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999997643 34443 5899999999999999 9999999999999999999999999999987666
Q ss_pred CCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 045493 933 SSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPG 979 (1048)
Q Consensus 933 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~ 979 (1048)
.......+||++|||||++.+ .+..++|+||+|++++++.++..|+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 566667889999999999876 5678899999999999887766553
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=8.6e-28 Score=265.88 Aligned_cols=201 Identities=28% Similarity=0.348 Sum_probs=100.3
Q ss_pred hcccceeeccccccCCCCCccc--ccCCcccEEEeecccccCCCCCCcccc-----cccceeEecCCccccCcccccCCC
Q 045493 399 MKKLNKYLLFENQFTGYLPQNV--CQSGSLTHFSVRNNNFVGPIPRSLQNC-----TSLYSLRLERNQLTGNISEVFGIY 471 (1048)
Q Consensus 399 l~~L~~l~l~~N~l~~~~~~~~--~~~~~L~~L~l~~N~l~~~~~~~l~~l-----~~L~~L~L~~n~l~~~~~~~~~~~ 471 (1048)
+++|+.|++++|++++..|..+ ..+++|++|++++|.+++. |..+..+ ++|++|++++|+++++++..|..+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 3334444444444443444433 4445555555555555554 5555554 566666666666666665666666
Q ss_pred CCCCeeeCcCCcccCc--cccc--ccCCCCccEEEecCcccCc---ccCccccccCCCcEEEcccCcccCCcC-ccccCC
Q 045493 472 PDLELLDLSNNNFFGE--ISSN--WIKCPQLATLNMGGNEISG---TIPSEIGNMTQLHKLDFSSNRLVGQIP-KQLGKL 543 (1048)
Q Consensus 472 ~~L~~L~Ls~n~l~~~--~~~~--~~~~~~L~~L~L~~N~i~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l 543 (1048)
++|+.|+|++|++.+. .+.. +..+++|++|++++|.|++ .....+..+++|++|+|++|++++..| ..+..+
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 6666666666665443 1111 2455555555555555552 111223345555555555555554442 333445
Q ss_pred CccCEEeecCccccCCCccccccccccceeecccCccccccccccccccccccccccccccc
Q 045493 544 TSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFS 605 (1048)
Q Consensus 544 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 605 (1048)
++|++|+|++|+++ .+|..+. ++|++|||++|+|+++ |. +..+++|++|+|++|+|+
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 55555555555555 4444333 4455555555555444 22 444444444444444443
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=3.9e-26 Score=272.94 Aligned_cols=201 Identities=22% Similarity=0.235 Sum_probs=92.5
Q ss_pred CcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEe
Q 045493 424 GSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNM 503 (1048)
Q Consensus 424 ~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L 503 (1048)
++|++|++++|.+++..+ .+++|+.|++++|+++.++.. +++|+.|+|++|++++.. . ..++|+.|++
T Consensus 101 ~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~lp~~----l~~L~~L~Ls~N~l~~l~-~---~~~~L~~L~L 168 (622)
T 3g06_A 101 PGLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTSLPVL----PPGLQELSVSDNQLASLP-A---LPSELCKLWA 168 (622)
T ss_dssp TTCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSCCCCC----CTTCCEEECCSSCCSCCC-C---CCTTCCEEEC
T ss_pred CCCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCcCCCC----CCCCCEEECcCCcCCCcC-C---ccCCCCEEEC
Confidence 344444444444443221 234455555555555443321 244555555555554321 1 1234445555
Q ss_pred cCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccc
Q 045493 504 GGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKL 583 (1048)
Q Consensus 504 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 583 (1048)
++|.|++ +| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++ .+
T Consensus 169 ~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~------------------------~l 216 (622)
T 3g06_A 169 YNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT------------------------SL 216 (622)
T ss_dssp CSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS------------------------SC
T ss_pred CCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc------------------------cc
Confidence 5555542 22 223445555555555442 2211 234444455554444 33
Q ss_pred ccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCcccccccc
Q 045493 584 IPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRM 663 (1048)
Q Consensus 584 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 663 (1048)
. . .+++|+.|+|++|+|+++. ..+++|+.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|..+..+
T Consensus 217 ~-~---~~~~L~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l 283 (622)
T 3g06_A 217 P-A---LPSGLKELIVSGNRLTSLP----VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHL 283 (622)
T ss_dssp C-C---CCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGS
T ss_pred C-C---CCCCCCEEEccCCccCcCC----CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhc
Confidence 1 1 1234444444444444422 23345555555555555 2333 3455555555555555 445555555
Q ss_pred CCccEEEeccceecCCCC
Q 045493 664 HGLSSIDVSYNELQGSIP 681 (1048)
Q Consensus 664 ~~L~~l~ls~N~l~~~~p 681 (1048)
++|+.|++++|++++.+|
T Consensus 284 ~~L~~L~L~~N~l~~~~~ 301 (622)
T 3g06_A 284 SSETTVNLEGNPLSERTL 301 (622)
T ss_dssp CTTCEEECCSCCCCHHHH
T ss_pred cccCEEEecCCCCCCcCH
Confidence 555666666665555444
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=9.2e-28 Score=266.30 Aligned_cols=253 Identities=19% Similarity=0.185 Sum_probs=112.0
Q ss_pred eeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeeccccccC
Q 045493 334 YIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFT 413 (1048)
Q Consensus 334 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~ 413 (1048)
+++.+.+.......+..+++|++|+|++|++++..|..|+++++|+.|+|++|.+++..+ +.
T Consensus 16 ~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~---------------- 77 (317)
T 3o53_A 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LE---------------- 77 (317)
T ss_dssp SCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ET----------------
T ss_pred eccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hh----------------
Confidence 444444433333333344455555555555554444555555555555555555543222 33
Q ss_pred CCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCccccccc
Q 045493 414 GYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWI 493 (1048)
Q Consensus 414 ~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~ 493 (1048)
.+++|++|++++|.+++.. ..++|++|++++|+++++.... +++|+.|++++|++++..+..+.
T Consensus 78 --------~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~ 141 (317)
T 3o53_A 78 --------SLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEG 141 (317)
T ss_dssp --------TCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTG
T ss_pred --------hcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhh
Confidence 3333444444444333211 1244555555555554443322 23455555555555444444444
Q ss_pred CCCCccEEEecCcccCcccCcccc-ccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccce
Q 045493 494 KCPQLATLNMGGNEISGTIPSEIG-NMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGY 572 (1048)
Q Consensus 494 ~~~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 572 (1048)
.+++|++|++++|.+++..+..+. .+++|++|+|++|++++. + ....+++|++|+|++|++++ +|..+..+++|++
T Consensus 142 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~ 218 (317)
T 3o53_A 142 CRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTW 218 (317)
T ss_dssp GGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSE
T ss_pred ccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccE
Confidence 445555555555555444443332 344555555555554432 1 11224444444444444442 2223444444444
Q ss_pred eecccCccccccccccccccccccccccccccc-chhhhhhccccccCeEECC
Q 045493 573 LDLSANRLSKLIPKNLGELRKLHHLNLSNNQFS-QEISIQIGKLVQLSKLDLS 624 (1048)
Q Consensus 573 L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls 624 (1048)
|+|++|+|+.+ |..+..+++|+.|++++|++. +..+..+..+++|+.|+++
T Consensus 219 L~L~~N~l~~l-~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 219 ISLRNNKLVLI-EKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp EECTTSCCCEE-CTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred EECcCCcccch-hhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 44444444432 333444444444444444443 3333333344444444444
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=7e-26 Score=270.71 Aligned_cols=269 Identities=28% Similarity=0.358 Sum_probs=175.9
Q ss_pred CccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccccccccc
Q 045493 25 QLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALS 104 (1048)
Q Consensus 25 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~ 104 (1048)
++++|++++|+|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+++ |. .+++|++|+++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSL-PV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCC-CC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcC-CC---CCCCCCEEECc
Confidence 4666777777666 4555444 56667777776666 3443 456666666666666643 33 45566666666
Q ss_pred ceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCC
Q 045493 105 YNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKN 184 (1048)
Q Consensus 105 ~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~ 184 (1048)
+|++++ +|. .+++|+.|++++|+++ ++ |.. +++
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~---------------------------------------~l-p~~---l~~ 142 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLT---------------------------------------SL-PVL---PPG 142 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCS---------------------------------------CC-CCC---CTT
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCC---------------------------------------cC-CCC---CCC
Confidence 666663 232 3455666666666554 22 221 366
Q ss_pred cceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeeccc
Q 045493 185 LTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSH 264 (1048)
Q Consensus 185 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 264 (1048)
|++|+|++|++++ +|. .+.+|+.|++++|++++ +| ..+++|+.|+|++|.+++ +|.. +++|+.|++++
T Consensus 143 L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~ 210 (622)
T 3g06_A 143 LQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYN 210 (622)
T ss_dssp CCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCS
T ss_pred CCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcC
Confidence 7777777777763 333 24567777777777773 44 345677777777777774 4432 36777777777
Q ss_pred ccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecccccccccccccceeeeccccccCCC
Q 045493 265 NQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSI 344 (1048)
Q Consensus 265 n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 344 (1048)
|.++. +| . .+++|+.|++++|++++ +| ..+++|+.|++++|.++. +
T Consensus 211 N~l~~-l~-------------------------~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-l 256 (622)
T 3g06_A 211 NRLTS-LP-------------------------A---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-L 256 (622)
T ss_dssp SCCSS-CC-------------------------C---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-C
T ss_pred Ccccc-cC-------------------------C---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-C
Confidence 77652 11 1 12467777777777775 33 445777778888887773 4
Q ss_pred CcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcc
Q 045493 345 PEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKK 401 (1048)
Q Consensus 345 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 401 (1048)
|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|++++..|..+..++.
T Consensus 257 p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~~ 309 (622)
T 3g06_A 257 PM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITS 309 (622)
T ss_dssp CC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHHH
T ss_pred Cc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhccc
Confidence 44 5678899999999998 67888999999999999999999888888887764
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=3.2e-27 Score=277.25 Aligned_cols=234 Identities=21% Similarity=0.197 Sum_probs=148.6
Q ss_pred cccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEec
Q 045493 425 SLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMG 504 (1048)
Q Consensus 425 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~ 504 (1048)
+|++|++++|.+++..|..|..+++|++|+|++|.+++..+ |..+++|+.|+|++|.+++..+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 55666666666665555666666666666666666665443 6666666666666666654332 2566666666
Q ss_pred CcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccc-cccccceeecccCccccc
Q 045493 505 GNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELG-LLAELGYLDLSANRLSKL 583 (1048)
Q Consensus 505 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~ 583 (1048)
+|.|++..+. .+++|+.|+|++|++++..|..|..+++|++|+|++|.+++..|..+. .+++|++|+|++|.|+++
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 6666654443 245666667777766666666666666677777777766665555554 566677777777776665
Q ss_pred ccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCccc-CCccccccc
Q 045493 584 IPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLS-GPIPSCFRR 662 (1048)
Q Consensus 584 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~ 662 (1048)
.+ +..+++|+.|+|++|+|+++++. +..+++|+.|||++|.|++ +|..+..+++|+.|++++|+++ +.+|..+..
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred cc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 22 23466677777777777665444 6666777777777777763 5556666777777777777776 455666666
Q ss_pred cCCccEEEec
Q 045493 663 MHGLSSIDVS 672 (1048)
Q Consensus 663 l~~L~~l~ls 672 (1048)
++.|+.++++
T Consensus 261 l~~L~~l~~~ 270 (487)
T 3oja_A 261 NQRVQTVAKQ 270 (487)
T ss_dssp CHHHHHHHHH
T ss_pred CCCCcEEecc
Confidence 6666666665
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=1e-28 Score=300.27 Aligned_cols=443 Identities=13% Similarity=0.120 Sum_probs=256.3
Q ss_pred ceeccccccccccCCccCcCCCCCCeEeccCCccC---CCCCcc------------cccccccceeecccccccCCCchh
Q 045493 210 SYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLS---GYIPPK------------LGSFKSLLYLYLSHNQLNGSLPSS 274 (1048)
Q Consensus 210 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~---~~~p~~------------~~~l~~L~~L~L~~n~l~~~~p~~ 274 (1048)
+.++++.+... ..+..+..+++|++|+++++... +..|.. ...+++|++|++++|.+.+..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 34555554332 22234567788999999887532 122221 235677888888888766544444
Q ss_pred hh-ccchhhhhhhccccccCCC-CCcccCCCCCCcEEEccCceeecccccccc----cccccceeeeccccccCCCCcch
Q 045493 275 FG-NLSSLKHLHVHNINKLSGS-IPKEIGNLKSLSHLWLSKTQLSGFIPPSLG----NLSNIRGLYIRENMLYGSIPEEL 348 (1048)
Q Consensus 275 ~~-~L~~L~~L~l~~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l~~L~~L~l~~n~l~~~~~~~~ 348 (1048)
+. .+++|++|++.++..++.. ++..+.++++|++|++++|.+++..+..+. .+++|+.|++++|. .......+
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l 203 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSAL 203 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHH
Confidence 43 4566666666554333321 222333555666666666655543333222 33455555555554 11111111
Q ss_pred ----hccCCCCeEeccCC-ccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeeccccccCCCCCcccccC
Q 045493 349 ----GRLKSLSQLSLSVN-KLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQS 423 (1048)
Q Consensus 349 ----~~l~~L~~L~Ls~N-~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~ 423 (1048)
..+++|++|++++| .+.+ ++..+.++++|+.|+++.+... +..|.+.+ ++..+..+
T Consensus 204 ~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~-----------------~~~~~~~~-l~~~l~~~ 264 (594)
T 2p1m_B 204 ERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAE-----------------VRPDVYSG-LSVALSGC 264 (594)
T ss_dssp HHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCC-----------------CCHHHHHH-HHHHHHTC
T ss_pred HHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCc-----------------cchhhHHH-HHHHHhcC
Confidence 22355555555555 2322 4444555555555553332210 11122221 11233444
Q ss_pred CcccEE-EeecccccCCCCCCcccccccceeEecCCccccCc-ccccCCCCCCCeeeCcCCcccCcccc-cccCCCCccE
Q 045493 424 GSLTHF-SVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNI-SEVFGIYPDLELLDLSNNNFFGEISS-NWIKCPQLAT 500 (1048)
Q Consensus 424 ~~L~~L-~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-~~~~~~~~~L~~L~Ls~n~l~~~~~~-~~~~~~~L~~ 500 (1048)
++|+.+ .+.+... ..++..+..+++|++|++++|.++... ...+..+++|+.|++++| ++..... ....+++|++
T Consensus 265 ~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 265 KELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp TTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 555555 2222111 223444456777888888887765332 223456788888888877 4432222 2234778888
Q ss_pred EEec---------CcccCcccCcccc-ccCCCcEEEcccCcccCCcCcccc-CCCccCEEeec--C----ccccCC----
Q 045493 501 LNMG---------GNEISGTIPSEIG-NMTQLHKLDFSSNRLVGQIPKQLG-KLTSLTSLTLN--G----NQLSGD---- 559 (1048)
Q Consensus 501 L~L~---------~N~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~---- 559 (1048)
|++. .+.+++.....+. .+++|+.|+++.|.+++.....+. .+++|++|+++ + |.+++.
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 8873 3556544333343 478888888888888765555554 47888888888 4 556522
Q ss_pred -CccccccccccceeecccCcccccccccccc-cccccccccccccccchhhhhh-ccccccCeEECCCCcccCcCCc-C
Q 045493 560 -IPLELGLLAELGYLDLSANRLSKLIPKNLGE-LRKLHHLNLSNNQFSQEISIQI-GKLVQLSKLDLSHNSLGGNIPS-E 635 (1048)
Q Consensus 560 -~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~ 635 (1048)
++..+..+++|++|+|++ .++...+..+.. +++|+.|+|++|.+++.....+ ..+++|++|+|++|.+++.... .
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~ 501 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLAN 501 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHT
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHH
Confidence 122256778899999977 676655556655 7889999999999887776666 6788999999999998654443 3
Q ss_pred cCCccccCeEECCCCcccCCccccc-cccCCccEEEecccee
Q 045493 636 ICNLESLEYMNLLQNKLSGPIPSCF-RRMHGLSSIDVSYNEL 676 (1048)
Q Consensus 636 ~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~l~ls~N~l 676 (1048)
...+++|++|++++|+++......+ ..+|.|+...+..+.-
T Consensus 502 ~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 502 ASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp GGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 4458899999999999865555555 5678887766666543
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=6.1e-29 Score=302.26 Aligned_cols=437 Identities=16% Similarity=0.161 Sum_probs=284.6
Q ss_pred ceeeccccCccccCCcccccccccceeccccccccc---cCCc------------cCcCCCCCCeEeccCCccCCCCCcc
Q 045493 186 TFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSG---SIPP------------TAGNLSNLKFLYLHDNRLSGYIPPK 250 (1048)
Q Consensus 186 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~------------~~~~l~~L~~L~L~~N~l~~~~p~~ 250 (1048)
+.++++++... ..+..+..+++|++|+|++|.... ..|. .+..+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 35566554432 223456678999999999986321 1221 1246789999999999988666666
Q ss_pred cc-cccccceeecccc-cccCC-CchhhhccchhhhhhhccccccCCCCCccc----CCCCCCcEEEccCce--eecc-c
Q 045493 251 LG-SFKSLLYLYLSHN-QLNGS-LPSSFGNLSSLKHLHVHNINKLSGSIPKEI----GNLKSLSHLWLSKTQ--LSGF-I 320 (1048)
Q Consensus 251 ~~-~l~~L~~L~L~~n-~l~~~-~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~----~~l~~L~~L~L~~n~--l~~~-~ 320 (1048)
+. .+++|++|++++| .+... ++..+..+++|++|+++++ .+.+..+..+ ..+++|++|++++|. ++.. +
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~-~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l 203 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRES-DVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSAL 203 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTC-EEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCC-ccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHH
Confidence 65 6899999999999 45422 4455668999999999984 4655444333 467799999999997 2211 1
Q ss_pred ccccccccccceeeeccc-cccCCCCcchhccCCCCeEeccCC-------ccccCcChhhhccCCCcEE-EeecccccCC
Q 045493 321 PPSLGNLSNIRGLYIREN-MLYGSIPEELGRLKSLSQLSLSVN-------KLNGSIPHCLGNLSNLKFF-ALRENELSGS 391 (1048)
Q Consensus 321 ~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~Ls~N-------~l~~~~~~~l~~l~~L~~L-~L~~n~l~~~ 391 (1048)
+..+..+++|+.|++++| .+.+ ++..+..+++|++|+++.+ .+.+ ++..+.++++|+.+ .+.+... +.
T Consensus 204 ~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~ 280 (594)
T 2p1m_B 204 ERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AY 280 (594)
T ss_dssp HHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GG
T ss_pred HHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-hh
Confidence 222345799999999998 4544 7788889999999996544 4443 44577888888888 3443332 24
Q ss_pred chhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCc-ccccCC
Q 045493 392 IPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNI-SEVFGI 470 (1048)
Q Consensus 392 ~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-~~~~~~ 470 (1048)
++..+..+++|+.|++++|.+++.... ..+..+++|++|++++| ++... ......
T Consensus 281 l~~~~~~~~~L~~L~L~~~~l~~~~l~-----------------------~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~ 336 (594)
T 2p1m_B 281 LPAVYSVCSRLTTLNLSYATVQSYDLV-----------------------KLLCQCPKLQRLWVLDY-IEDAGLEVLAST 336 (594)
T ss_dssp GGGGHHHHTTCCEEECTTCCCCHHHHH-----------------------HHHTTCTTCCEEEEEGG-GHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCEEEccCCCCCHHHHH-----------------------HHHhcCCCcCEEeCcCc-cCHHHHHHHHHh
Confidence 555555677777777777765432111 11233444444444444 22111 111123
Q ss_pred CCCCCeeeC---------cCCcccCccccccc-CCCCccEEEecCcccCcccCcccc-ccCCCcEEEcc--c----Cccc
Q 045493 471 YPDLELLDL---------SNNNFFGEISSNWI-KCPQLATLNMGGNEISGTIPSEIG-NMTQLHKLDFS--S----NRLV 533 (1048)
Q Consensus 471 ~~~L~~L~L---------s~n~l~~~~~~~~~-~~~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~Ls--~----N~l~ 533 (1048)
+++|+.|++ +.+.+++.....+. .+++|++|.++.|.+++..+..+. .+++|+.|+++ + |.++
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~ 416 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT 416 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc
Confidence 455555555 23444443333333 377888888888888766555554 47888888888 3 5555
Q ss_pred CCc-----CccccCCCccCEEeecCccccCCCcccccc-ccccceeecccCcccccccccc-cccccccccccccccccc
Q 045493 534 GQI-----PKQLGKLTSLTSLTLNGNQLSGDIPLELGL-LAELGYLDLSANRLSKLIPKNL-GELRKLHHLNLSNNQFSQ 606 (1048)
Q Consensus 534 ~~~-----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~l-~~l~~L~~L~Ls~N~l~~ 606 (1048)
+.. +..+..+++|++|+|++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|++|+|++|++++
T Consensus 417 ~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 417 LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 221 12256678889999977 666554555554 7889999999998876655555 668899999999999876
Q ss_pred hhhhh-hccccccCeEECCCCcccCcCCcCc-CCccccCeEECCCCcc
Q 045493 607 EISIQ-IGKLVQLSKLDLSHNSLGGNIPSEI-CNLESLEYMNLLQNKL 652 (1048)
Q Consensus 607 ~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l 652 (1048)
..... ...+++|+.|++++|+++......+ ..++.|+...+..+.-
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 65543 3458899999999998865444444 4567777777766654
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.4e-25 Score=243.81 Aligned_cols=210 Identities=24% Similarity=0.287 Sum_probs=128.6
Q ss_pred CCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeec
Q 045493 473 DLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLN 552 (1048)
Q Consensus 473 ~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 552 (1048)
+|+.|++++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444444444444444444455555555555544444445555555555555555554444455555555555555
Q ss_pred CccccCCCccccccccccceeecccCcccccc-cccccccccccccccccccccchhhhhhccccccC----eEECCCCc
Q 045493 553 GNQLSGDIPLELGLLAELGYLDLSANRLSKLI-PKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLS----KLDLSHNS 627 (1048)
Q Consensus 553 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N~ 627 (1048)
+|.+++..+..+..+++|++|++++|+++.+. |..|..+++|++|++++|+++++.+..+..+.+|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 55555444444555555555555555555432 55555555555566666655555555555555555 78899999
Q ss_pred ccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCCc
Q 045493 628 LGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683 (1048)
Q Consensus 628 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~ 683 (1048)
+++..+..+.. .+|++|+|++|++++..+..|..+++|+.|++++|+|++.+|.-
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 88665555544 58999999999999888888889999999999999999988754
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.4e-25 Score=243.73 Aligned_cols=218 Identities=24% Similarity=0.249 Sum_probs=172.4
Q ss_pred eecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccc
Q 045493 14 TLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELG 93 (1048)
Q Consensus 14 ~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~ 93 (1048)
.++++|...++++++|+|++|+|++..+..|+.+++|++|+|++|+++++.+.+|+.+++|++|+|++|++++..+..|.
T Consensus 18 ~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (276)
T 2z62_A 18 NFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS 97 (276)
T ss_dssp CCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTT
T ss_pred CccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhc
Confidence 45677777778899999999999988878899999999999999999887778899999999999999999988888888
Q ss_pred cccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCcccc
Q 045493 94 ELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSG 173 (1048)
Q Consensus 94 ~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~ 173 (1048)
++++|++|++++|++++..+..++.+++|++|++++|++.+.
T Consensus 98 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-------------------------------------- 139 (276)
T 2z62_A 98 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF-------------------------------------- 139 (276)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--------------------------------------
T ss_pred CCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee--------------------------------------
Confidence 899999999999988877776788888888888888877521
Q ss_pred ccCCCCCCCCCcceeeccccCccccCCcccccccccc----eeccccccccccCCccCcCCCCCCeEeccCCccCCCCCc
Q 045493 174 VIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLS----YLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPP 249 (1048)
Q Consensus 174 ~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 249 (1048)
.+|..|..+++|++|+|++|++++..+..|..+.+|+ +|++++|++.+..+..+. ..+|++|+|++|++++..+.
T Consensus 140 ~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~ 218 (276)
T 2z62_A 140 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDG 218 (276)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTT
T ss_pred cCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHh
Confidence 1345566677777777777777766666777777766 778888888754444443 44788888888888866666
Q ss_pred ccccccccceeecccccccCC
Q 045493 250 KLGSFKSLLYLYLSHNQLNGS 270 (1048)
Q Consensus 250 ~~~~l~~L~~L~L~~n~l~~~ 270 (1048)
.|..+++|++|++++|++...
T Consensus 219 ~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 219 IFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp TTTTCCSCCEEECCSSCBCCC
T ss_pred HhcccccccEEEccCCccccc
Confidence 677888888888888888743
No 325
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.3e-26 Score=272.10 Aligned_cols=243 Identities=21% Similarity=0.213 Sum_probs=210.3
Q ss_pred CCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccc
Q 045493 22 LFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNEL 101 (1048)
Q Consensus 22 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L 101 (1048)
.+++|++|||++|+|++..|..|+.+++|++|+|++|.+++..| |+.+++|++|+|++|+|+++.+ .++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34589999999999999889999999999999999999997655 9999999999999999997533 3899999
Q ss_pred cccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCC-
Q 045493 102 ALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLG- 180 (1048)
Q Consensus 102 ~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~- 180 (1048)
++++|++++..+.. +++|+.|+|++|.+++.. |..+.++++|+.|+|++|.+++..|..+.
T Consensus 105 ~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~---------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 166 (487)
T 3oja_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLR---------------DLDEGCRSRVQYLDLKLNEIDTVNFAELAA 166 (487)
T ss_dssp ECCSSCCCCEEECC---CSSCEEEECCSSCCCSGG---------------GBCGGGGSSEEEEECTTSCCCEEEGGGGGG
T ss_pred ECcCCcCCCCCccc---cCCCCEEECCCCCCCCCC---------------chhhcCCCCCCEEECCCCCCCCcChHHHhh
Confidence 99999999776654 588999999999998643 34667789999999999999999998886
Q ss_pred CCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCccccccccccee
Q 045493 181 GLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYL 260 (1048)
Q Consensus 181 ~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 260 (1048)
.+++|++|+|++|.+++..+ +..+++|++|+|++|.+++ +|+.+..+++|++|+|++|.+++ +|..+..+++|+.|
T Consensus 167 ~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L 242 (487)
T 3oja_A 167 SSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242 (487)
T ss_dssp GTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEE
T ss_pred hCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEE
Confidence 79999999999999997633 4469999999999999996 55568899999999999999994 77789999999999
Q ss_pred eccccccc-CCCchhhhccchhhhhhhccccccC
Q 045493 261 YLSHNQLN-GSLPSSFGNLSSLKHLHVHNINKLS 293 (1048)
Q Consensus 261 ~L~~n~l~-~~~p~~~~~L~~L~~L~l~~~n~l~ 293 (1048)
++++|++. +.+|..+..++.|+.+++.....+.
T Consensus 243 ~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~~~~~ 276 (487)
T 3oja_A 243 DLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLT 276 (487)
T ss_dssp ECTTCCBCHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred EcCCCCCcCcchHHHHHhCCCCcEEecccccccc
Confidence 99999997 6678889999999999986433333
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.6e-24 Score=232.61 Aligned_cols=186 Identities=23% Similarity=0.251 Sum_probs=123.0
Q ss_pred CccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecc
Q 045493 497 QLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLS 576 (1048)
Q Consensus 497 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 576 (1048)
++++|++++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+++
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 45555555555554444455555555555555555554444445556666666666666654444555666666666666
Q ss_pred cCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCc
Q 045493 577 ANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPI 656 (1048)
Q Consensus 577 ~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 656 (1048)
+|+++.+.+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 66666666666666666666666666666666666677777777777777777666666777888888888888888777
Q ss_pred cccccccCCccEEEeccceecCCCCC
Q 045493 657 PSCFRRMHGLSSIDVSYNELQGSIPH 682 (1048)
Q Consensus 657 ~~~~~~l~~L~~l~ls~N~l~~~~p~ 682 (1048)
+..|..++.|+.|++++|+|.+.++.
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred HHHhccccCCCEEEecCCCeeCCCcc
Confidence 77777788888888888888776653
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=6.3e-24 Score=229.65 Aligned_cols=204 Identities=25% Similarity=0.284 Sum_probs=154.1
Q ss_pred cceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEccc
Q 045493 450 LYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSS 529 (1048)
Q Consensus 450 L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~ 529 (1048)
.+.++++++.++.++.... ++++.|+|++|++++..+..|..+++|++|++++|.++...+..|..+++|++|+|++
T Consensus 18 ~~~l~~~~~~l~~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLTAIPSNIP---ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCSSCCSCCC---TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCCccCCCCC---CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 4556666666665443322 4566777777777666666677777777777777777755556667777777777777
Q ss_pred CcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhh
Q 045493 530 NRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEIS 609 (1048)
Q Consensus 530 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 609 (1048)
|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++.+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 77776666677777888888888888876666777788888888888888887777778888888888888888888777
Q ss_pred hhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCc
Q 045493 610 IQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPI 656 (1048)
Q Consensus 610 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 656 (1048)
..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++....
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 77888888999999999998777777888899999999999987543
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=6.8e-24 Score=231.24 Aligned_cols=205 Identities=26% Similarity=0.270 Sum_probs=109.1
Q ss_pred cccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCc
Q 045493 444 LQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLH 523 (1048)
Q Consensus 444 l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 523 (1048)
+.++++++++++++|.++.++...+ ++++.|+|++|.+++..+..|..+++|++|++++|.|++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCcCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 4555666666666666666554432 4566666666666555555555555666666666655533221 4455555
Q ss_pred EEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccccccccccccccc
Q 045493 524 KLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQ 603 (1048)
Q Consensus 524 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~ 603 (1048)
+|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|++|+|++|+|+.+++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~------------------ 141 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPP------------------ 141 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCT------------------
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccCh------------------
Confidence 5555555555 344444555555555555555554444445555555555555555554444
Q ss_pred ccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCC
Q 045493 604 FSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGS 679 (1048)
Q Consensus 604 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~ 679 (1048)
..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..++.|+.+++++|+|.+.
T Consensus 142 ------~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 142 ------GLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp ------TTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred ------hhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 44444555555555555555444444455555555555555555 3344444445555555555555544
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.2e-24 Score=235.50 Aligned_cols=224 Identities=25% Similarity=0.289 Sum_probs=181.0
Q ss_pred ccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEE
Q 045493 447 CTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526 (1048)
Q Consensus 447 l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 526 (1048)
+..+..+++..+.+.... .+..+++|+.|++++|.++.. ..+..+++|++|++++|.+++. ..+..+++|++|+
T Consensus 18 ~~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEE
T ss_pred HHHHHHHHhcCccccccc--ccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEE
Confidence 345556666666655432 234567778888888877643 2466778888888888888753 3678888888888
Q ss_pred cccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccc
Q 045493 527 FSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQ 606 (1048)
Q Consensus 527 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 606 (1048)
|++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|++++|+++++.+..|..+++|++|++++|++++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 88888887777778888888888888888887777778888889999999998888888888888999999999999988
Q ss_pred hhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCCc
Q 045493 607 EISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHS 683 (1048)
Q Consensus 607 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~ 683 (1048)
..+..++.+++|++|++++|++++..+..+..+++|++|++++|++.+. ++.|+.++++.|.++|.+|..
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 8888888899999999999999988888889999999999999998854 457888999999999999875
No 330
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=2e-25 Score=252.54 Aligned_cols=253 Identities=21% Similarity=0.230 Sum_probs=187.7
Q ss_pred EEeecccccCCCCCCcccccccceeEecCCccccCcc----cccCCCC-CCCeeeCcCCcccCcccccccCC-----CCc
Q 045493 429 FSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNIS----EVFGIYP-DLELLDLSNNNFFGEISSNWIKC-----PQL 498 (1048)
Q Consensus 429 L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~----~~~~~~~-~L~~L~Ls~n~l~~~~~~~~~~~-----~~L 498 (1048)
++++.|++++.+|..+...++|++|+|++|.+++... ..|..++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566777777777666666668888888888887776 6677777 78888888888887766666654 888
Q ss_pred cEEEecCcccCcccCcccccc-----CCCcEEEcccCcccCCcCcccc----C-CCccCEEeecCccccCCCccc----c
Q 045493 499 ATLNMGGNEISGTIPSEIGNM-----TQLHKLDFSSNRLVGQIPKQLG----K-LTSLTSLTLNGNQLSGDIPLE----L 564 (1048)
Q Consensus 499 ~~L~L~~N~i~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~----~-l~~L~~L~L~~N~l~~~~~~~----~ 564 (1048)
++|++++|.+++..+..++.. ++|++|+|++|++++..+..+. . .++|++|+|++|.+++..+.. +
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 888888888887666654443 7889999999988876655443 3 358899999999888544433 3
Q ss_pred cccc-ccceeecccCccccccccccccc-----ccccccccccccccchhhh----hhcc-ccccCeEECCCCcccCcCC
Q 045493 565 GLLA-ELGYLDLSANRLSKLIPKNLGEL-----RKLHHLNLSNNQFSQEISI----QIGK-LVQLSKLDLSHNSLGGNIP 633 (1048)
Q Consensus 565 ~~l~-~L~~L~Ls~N~l~~~~~~~l~~l-----~~L~~L~Ls~N~l~~~~~~----~~~~-l~~L~~L~Ls~N~l~~~~~ 633 (1048)
..++ +|++|+|++|+|++..+..+... ++|++|+|++|+|++.... .+.. .++|++|||++|.|++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 4444 89999999999988777655443 5899999999999875433 3333 4589999999999987554
Q ss_pred ----cCcCCccccCeEECCCCcccCCccc-------cccccCCccEEEeccceecCCCC
Q 045493 634 ----SEICNLESLEYMNLLQNKLSGPIPS-------CFRRMHGLSSIDVSYNELQGSIP 681 (1048)
Q Consensus 634 ----~~~~~l~~L~~L~L~~N~l~~~~~~-------~~~~l~~L~~l~ls~N~l~~~~p 681 (1048)
..+..+++|++|+|++|.+++..+. .+..++.|++||+++|++.+..+
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 3456678899999999996655443 56677889999999999876533
No 331
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=6.3e-24 Score=225.25 Aligned_cols=205 Identities=21% Similarity=0.250 Sum_probs=142.8
Q ss_pred ecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCc-cccCCCcCCCCCCCCcEEeCCC-CcCCCCCcccc
Q 045493 15 LQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQ-FSGIIPPQIGILTNLVVLRLSV-NQLNGLIPEEL 92 (1048)
Q Consensus 15 ~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~p~~~~~l~~L~~L~ls~-n~l~~~~~~~~ 92 (1048)
++++|. .++++++|+|++|+|++..+..|+.+++|++|+|++|+ ++.+.+.+|+++++|++|++++ |+++++.+..|
T Consensus 23 l~~ip~-~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 23 IQRIPS-LPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp CSSCCC-CCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccccCC-CCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 666666 66778888888888887777777788888888888886 7766666777777888888877 77777666677
Q ss_pred ccccccccccccceecccccCcCcCCcCCCc---eEEeecc-cccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCC
Q 045493 93 GELTSLNELALSYNRLNGSIPASLGNLSNLV---QLSLSNN-SLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHT 168 (1048)
Q Consensus 93 ~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~---~L~l~~n-~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~ 168 (1048)
.++++|++|++++|++++ +|. |..+++|+ .|++++| .++
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~----------------------------------- 144 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT----------------------------------- 144 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-----------------------------------
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchh-----------------------------------
Confidence 777777777777777774 444 66666666 6666666 543
Q ss_pred CccccccCCCCCCCCCcc-eeeccccCccccCCcccccccccceecccccc-ccccCCccCcCC-CCCCeEeccCCccCC
Q 045493 169 NNFSGVIPRSLGGLKNLT-FVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQ-LSGSIPPTAGNL-SNLKFLYLHDNRLSG 245 (1048)
Q Consensus 169 n~~~~~~~~~~~~l~~L~-~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~ 245 (1048)
++.+..|..+++|+ .|++++|+++.+.+..|.. ++|++|+|++|+ +++..+..|.++ ++|++|++++|++++
T Consensus 145 ----~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~ 219 (239)
T 2xwt_C 145 ----SIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA 219 (239)
T ss_dssp ----EECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC
T ss_pred ----hcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc
Confidence 34445567777777 7777777777444444444 677777777774 765555667777 777777777777774
Q ss_pred CCCcccccccccceeecccc
Q 045493 246 YIPPKLGSFKSLLYLYLSHN 265 (1048)
Q Consensus 246 ~~p~~~~~l~~L~~L~L~~n 265 (1048)
+|.. .+++|+.|+++++
T Consensus 220 -l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 220 -LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp -CCCT--TCTTCSEEECTTC
T ss_pred -CChh--HhccCceeeccCc
Confidence 3332 4567777777665
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=2.2e-24 Score=233.44 Aligned_cols=234 Identities=24% Similarity=0.291 Sum_probs=161.8
Q ss_pred CCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccc
Q 045493 19 PFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSL 98 (1048)
Q Consensus 19 p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L 98 (1048)
|-..+.++..+++..+.+.+.. .+..+++|+.|++++|.++. + .+++.+++|++|++++|++++. ..+..+++|
T Consensus 14 ~~~~~~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L 87 (272)
T 3rfs_A 14 PDDAFAETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNL 87 (272)
T ss_dssp CSHHHHHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTC
T ss_pred CCchHHHHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCC
Confidence 4445567777778888776553 35677888888888888873 3 4588888888888888888864 467888888
Q ss_pred ccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCC
Q 045493 99 NELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRS 178 (1048)
Q Consensus 99 ~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~ 178 (1048)
++|++++|++++..+..|.++++|++|++++|++++.. |..+..+++|+.|++++|.+++..+..
T Consensus 88 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~---------------~~~~~~l~~L~~L~L~~n~l~~~~~~~ 152 (272)
T 3rfs_A 88 TYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLP---------------DGVFDKLTNLTYLNLAHNQLQSLPKGV 152 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC---------------TTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccC---------------HHHhccCCCCCEEECCCCccCccCHHH
Confidence 88888888888777777888888888888888876322 123455566666666666666666666
Q ss_pred CCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccc
Q 045493 179 LGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLL 258 (1048)
Q Consensus 179 ~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 258 (1048)
|..+++|+.|++++|++++..+..|..+++|++|+|++|++.+..+..+..+++|++|+|++|.+.+. +++|+
T Consensus 153 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~ 225 (272)
T 3rfs_A 153 FDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIR 225 (272)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTH
T ss_pred hccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHH
Confidence 66666777777777766665555566666677777777666655555566666666666666665532 33566
Q ss_pred eeecccccccCCCchhhhccch
Q 045493 259 YLYLSHNQLNGSLPSSFGNLSS 280 (1048)
Q Consensus 259 ~L~L~~n~l~~~~p~~~~~L~~ 280 (1048)
.|++..|.+.|.+|.+++.+..
T Consensus 226 ~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 226 YLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp HHHHHHHHTGGGBBCTTSCBCG
T ss_pred HHHHHHHhCCCcccCcccccCC
Confidence 6666666666666666555443
No 333
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=7.7e-25 Score=258.83 Aligned_cols=182 Identities=12% Similarity=0.141 Sum_probs=142.0
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCccc-------chhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEE
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIG-------INQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYE 853 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~-------~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 853 (1048)
.+.||+|+||+||+|+.. ++.+++|+.......... ....+|++.+++++||||+++..++...+..|+|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 446899999999999554 788888886543222111 112556677788999999976666667777899999
Q ss_pred ccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC
Q 045493 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS 933 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 933 (1048)
|+++|+|.++++. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+|+......
T Consensus 420 ~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 420 YINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp CCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred CCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999864 457999999999999999 9999999999999998 99999999999775432
Q ss_pred CC-------cccccccccccccccccc--CCCCchhhHHHHHHHHHHHHhCCCCC
Q 045493 934 SN-------WSELAGTCGYIAPELAYT--MRANEKCDVFNFGVLVLEVIEGKHPG 979 (1048)
Q Consensus 934 ~~-------~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~ 979 (1048)
.. ....+||+.|||||++.. ..|+..+|+||..+-..+-+.++.+|
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 21 135679999999999986 56788899999999999988887765
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=2.3e-23 Score=227.10 Aligned_cols=203 Identities=25% Similarity=0.307 Sum_probs=135.5
Q ss_pred ccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccccceecccccCcCcCCcCCCc
Q 045493 44 ISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLV 123 (1048)
Q Consensus 44 ~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~ 123 (1048)
++.+++++.+++++|.++ .+|..+. +++++|+|++|+++++.+..|..+++|++|++++|+++...+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 344444555555555554 2333332 3455555555555544444555555555555555555533221 4555555
Q ss_pred eEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCccc
Q 045493 124 QLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEI 203 (1048)
Q Consensus 124 ~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~ 203 (1048)
.|++++|+++ .+|..+..+++|+.|++++|.+++..+..|.++++|++|+|++|++++..+..|
T Consensus 81 ~L~Ls~N~l~----------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 144 (290)
T 1p9a_G 81 TLDLSHNQLQ----------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLL 144 (290)
T ss_dssp EEECCSSCCS----------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred EEECCCCcCC----------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhc
Confidence 6666555553 233445555556666666666666667788888999999999999987777788
Q ss_pred ccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeeccccccc
Q 045493 204 GNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLN 268 (1048)
Q Consensus 204 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~ 268 (1048)
..+++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+.+|+.|+|++|++.
T Consensus 145 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 145 TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 88999999999999998665666788999999999999998 57777778889999999999876
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=7.5e-25 Score=247.75 Aligned_cols=260 Identities=20% Similarity=0.173 Sum_probs=144.1
Q ss_pred EEeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCccccc-ccceeEecCCc
Q 045493 381 FALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCT-SLYSLRLERNQ 459 (1048)
Q Consensus 381 L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~-~L~~L~L~~n~ 459 (1048)
+.++.|.+++.+|+.+...++|+.|++++|++++..+..++ ..|..++ +|++|+|++|.
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~--------------------~~l~~~~~~L~~L~Ls~N~ 62 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELI--------------------QAFANTPASVTSLNLSGNS 62 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHH--------------------HHHHTCCTTCCEEECCSSC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHH--------------------HHHHhCCCceeEEECcCCC
Confidence 56677777766666665555566666666666554431000 3344444 45555555555
Q ss_pred cccCcccccCCC-----CCCCeeeCcCCcccCccccccc----CC-CCccEEEecCcccCcccCccccc-----cCCCcE
Q 045493 460 LTGNISEVFGIY-----PDLELLDLSNNNFFGEISSNWI----KC-PQLATLNMGGNEISGTIPSEIGN-----MTQLHK 524 (1048)
Q Consensus 460 l~~~~~~~~~~~-----~~L~~L~Ls~n~l~~~~~~~~~----~~-~~L~~L~L~~N~i~~~~~~~~~~-----l~~L~~ 524 (1048)
+++.....|... ++|++|+|++|.+++..+..+. .+ ++|++|++++|.|++..+..+.. .++|++
T Consensus 63 l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 142 (362)
T 3goz_A 63 LGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITS 142 (362)
T ss_dssp GGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCE
T ss_pred CCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeE
Confidence 554444433332 5555555555555544433222 22 55666666666665544433332 246666
Q ss_pred EEcccCcccCCcCc----cccCCC-ccCEEeecCccccCCCcccccc----c-cccceeecccCcccccc----cccccc
Q 045493 525 LDFSSNRLVGQIPK----QLGKLT-SLTSLTLNGNQLSGDIPLELGL----L-AELGYLDLSANRLSKLI----PKNLGE 590 (1048)
Q Consensus 525 L~Ls~N~l~~~~~~----~~~~l~-~L~~L~L~~N~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~~----~~~l~~ 590 (1048)
|+|++|++++..+. .+..++ +|++|+|++|++++..+..+.. + ++|++|||++|+|+... +..+..
T Consensus 143 L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 143 LNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp EECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred EEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 66666666643322 233343 6666666666666555443332 2 46777777777766532 233333
Q ss_pred -cccccccccccccccchhhh----hhccccccCeEECCCCcccCc-------CCcCcCCccccCeEECCCCcccCCccc
Q 045493 591 -LRKLHHLNLSNNQFSQEISI----QIGKLVQLSKLDLSHNSLGGN-------IPSEICNLESLEYMNLLQNKLSGPIPS 658 (1048)
Q Consensus 591 -l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~-------~~~~~~~l~~L~~L~L~~N~l~~~~~~ 658 (1048)
.++|++|+|++|+|++.+.. .+..+++|++|+|++|.+.+. ++..+..+++|++|++++|++.+..+.
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 34677777777777665442 234567777777777774432 233566677788888888888765444
Q ss_pred cc
Q 045493 659 CF 660 (1048)
Q Consensus 659 ~~ 660 (1048)
.+
T Consensus 303 ~~ 304 (362)
T 3goz_A 303 PI 304 (362)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=4.5e-23 Score=218.66 Aligned_cols=196 Identities=14% Similarity=0.167 Sum_probs=111.4
Q ss_pred CCCeeeCcCCcccCcccccccCCCCccEEEecCcc-cCcccCccccccCCCcEEEccc-CcccCCcCccccCCCccCEEe
Q 045493 473 DLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNE-ISGTIPSEIGNMTQLHKLDFSS-NRLVGQIPKQLGKLTSLTSLT 550 (1048)
Q Consensus 473 ~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~ 550 (1048)
+++.|++++|++++..+..|..+++|++|++++|. ++...+..|.++++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 44555555555544444445555555555555554 5444444555555555555555 555544445555555555555
Q ss_pred ecCccccCCCccccccccccc---eeecccC-ccccccccccccccccc-ccccccccccchhhhhhccccccCeEECCC
Q 045493 551 LNGNQLSGDIPLELGLLAELG---YLDLSAN-RLSKLIPKNLGELRKLH-HLNLSNNQFSQEISIQIGKLVQLSKLDLSH 625 (1048)
Q Consensus 551 L~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~~l~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 625 (1048)
+++|++++ +|. +..+++|+ +|++++| +++.+.+..|..+++|+ +|++++|+++.+....+.. ++|++|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 55555553 333 55555555 6666666 66665555566666666 6666666666555544544 5666666666
Q ss_pred Cc-ccCcCCcCcCCc-cccCeEECCCCcccCCccccccccCCccEEEeccc
Q 045493 626 NS-LGGNIPSEICNL-ESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYN 674 (1048)
Q Consensus 626 N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N 674 (1048)
|+ +++..+..|..+ ++|++|++++|+|++..+. .++.|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 63 665555666666 6677777777777644433 4556666666654
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=2.4e-23 Score=230.10 Aligned_cols=202 Identities=18% Similarity=0.185 Sum_probs=132.5
Q ss_pred CCCCeeeCcCCcccCcccccc--cCCCCccEEEecCcccCcccC----ccccccCCCcEEEcccCcccCCcCccccCCCc
Q 045493 472 PDLELLDLSNNNFFGEISSNW--IKCPQLATLNMGGNEISGTIP----SEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTS 545 (1048)
Q Consensus 472 ~~L~~L~Ls~n~l~~~~~~~~--~~~~~L~~L~L~~N~i~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 545 (1048)
++|++|++++|++.+..+..+ ..+++|++|++++|.+++..+ ..+..+++|++|+|++|++.+..+..|..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 446666666666666665555 566666666666666665433 23345667777777777776666667777777
Q ss_pred cCEEeecCccccCC--C--ccccccccccceeecccCcccccccc---cccccccccccccccccccchhhhhhccc---
Q 045493 546 LTSLTLNGNQLSGD--I--PLELGLLAELGYLDLSANRLSKLIPK---NLGELRKLHHLNLSNNQFSQEISIQIGKL--- 615 (1048)
Q Consensus 546 L~~L~L~~N~l~~~--~--~~~~~~l~~L~~L~Ls~N~l~~~~~~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l--- 615 (1048)
|++|+|++|++.+. + +..+..+++|++|+|++|+|+.+.+. .+..+++|++|+|++|+|++..+..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 77777777776531 1 12235667777777777777643221 24566777777777777777655555544
Q ss_pred cccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecC
Q 045493 616 VQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQG 678 (1048)
Q Consensus 616 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~ 678 (1048)
++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..++.|++|++++|+++.
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 57888888888887 5566554 6888888888888764 22 5667888888888887754
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.8e-24 Score=247.19 Aligned_cols=242 Identities=20% Similarity=0.278 Sum_probs=181.2
Q ss_pred CCCCcccccccceeEecCCccccCcc----cccCCCCCCCeeeCcCCcc---cCcccccc-------cCCCCccEEEecC
Q 045493 440 IPRSLQNCTSLYSLRLERNQLTGNIS----EVFGIYPDLELLDLSNNNF---FGEISSNW-------IKCPQLATLNMGG 505 (1048)
Q Consensus 440 ~~~~l~~l~~L~~L~L~~n~l~~~~~----~~~~~~~~L~~L~Ls~n~l---~~~~~~~~-------~~~~~L~~L~L~~ 505 (1048)
++..+..+++|++|+|++|.++.... ..+..+++|+.|+|++|.+ ++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 44556677778888888887776533 3366778888888887543 33334333 5778888888888
Q ss_pred cccCc----ccCccccccCCCcEEEcccCcccCCcCcccc----CC---------CccCEEeecCcccc-CCCc---ccc
Q 045493 506 NEISG----TIPSEIGNMTQLHKLDFSSNRLVGQIPKQLG----KL---------TSLTSLTLNGNQLS-GDIP---LEL 564 (1048)
Q Consensus 506 N~i~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----~l---------~~L~~L~L~~N~l~-~~~~---~~~ 564 (1048)
|.+++ .++..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ ..++ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 88886 4666778888888888888888654443333 33 88999999999887 3334 466
Q ss_pred ccccccceeecccCcccc-----ccccccccccccccccccccccc----chhhhhhccccccCeEECCCCcccCc----
Q 045493 565 GLLAELGYLDLSANRLSK-----LIPKNLGELRKLHHLNLSNNQFS----QEISIQIGKLVQLSKLDLSHNSLGGN---- 631 (1048)
Q Consensus 565 ~~l~~L~~L~Ls~N~l~~-----~~~~~l~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~---- 631 (1048)
..+++|++|+|++|+|+. +.+..+..+++|+.|+|++|+|+ ...+..+..+++|++|+|++|.|++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 778889999999998883 34447888899999999999986 33455677889999999999999865
Q ss_pred CCcCc--CCccccCeEECCCCcccC----Cccccc-cccCCccEEEeccceecCCCC
Q 045493 632 IPSEI--CNLESLEYMNLLQNKLSG----PIPSCF-RRMHGLSSIDVSYNELQGSIP 681 (1048)
Q Consensus 632 ~~~~~--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~l~ls~N~l~~~~p 681 (1048)
++..+ +.+++|++|+|++|+|++ .+|..+ ..++.|++|++++|++++..|
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 44555 348899999999999987 467766 568999999999999987654
No 339
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.4e-22 Score=214.66 Aligned_cols=181 Identities=28% Similarity=0.312 Sum_probs=115.8
Q ss_pred ccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeeccc
Q 045493 498 LATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSA 577 (1048)
Q Consensus 498 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 577 (1048)
.++++++++.++ .+|..+. +.++.|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 445555555555 3333332 4566666666666655555566666666666666666655555566666666666666
Q ss_pred CcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCcc
Q 045493 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIP 657 (1048)
Q Consensus 578 N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 657 (1048)
|+|+.+.+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 66666655666666666666666666666666666666777777777777776555567777777777777777776666
Q ss_pred ccccccCCccEEEeccceecCCCC
Q 045493 658 SCFRRMHGLSSIDVSYNELQGSIP 681 (1048)
Q Consensus 658 ~~~~~l~~L~~l~ls~N~l~~~~p 681 (1048)
..|..++.|++|++++|+|++..+
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTTST
T ss_pred HHHhCCCCCCEEEeeCCceeCCcc
Confidence 667777777777777777776643
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.9e-22 Score=222.23 Aligned_cols=194 Identities=23% Similarity=0.334 Sum_probs=111.9
Q ss_pred ccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcE
Q 045493 445 QNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHK 524 (1048)
Q Consensus 445 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 524 (1048)
..+++|++|++++|.++.++ .+..+++|+.|++++|++++..+ +..+++|++|++++|.+++. ..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 34455555555555555443 34455556666666665554433 55555666666666665532 24556666666
Q ss_pred EEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccc
Q 045493 525 LDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQF 604 (1048)
Q Consensus 525 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l 604 (1048)
|++++|++++. + .+..+++|++|++++|++++..+ +..+++|++|++++|+++++.+ +..+++|+.|++++|++
T Consensus 112 L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCcc
Confidence 66666666543 2 25666666666666666663322 5566666666666666665433 55666666666666666
Q ss_pred cchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccC
Q 045493 605 SQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSG 654 (1048)
Q Consensus 605 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 654 (1048)
+++.+ +..+++|++|+|++|++++.. .+..+++|++|+|++|++++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 55443 556666666666666666433 25666666666666666654
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.8e-22 Score=222.34 Aligned_cols=215 Identities=20% Similarity=0.310 Sum_probs=184.9
Q ss_pred ccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEE
Q 045493 447 CTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526 (1048)
Q Consensus 447 l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 526 (1048)
+..+..+.+..+.++++. .+..+++|+.|++++|.++.. + .+..+++|++|++++|.+++..+ +..+++|++|+
T Consensus 18 l~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~ 91 (308)
T 1h6u_A 18 LANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELE 91 (308)
T ss_dssp HHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEE
T ss_pred HHHHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEE
Confidence 344555566666666533 234578999999999999864 3 58889999999999999996555 89999999999
Q ss_pred cccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccc
Q 045493 527 FSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQ 606 (1048)
Q Consensus 527 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 606 (1048)
|++|++++. ..+..+++|++|+|++|++++. + .+..+++|++|++++|+++++.+ +..+++|+.|++++|++++
T Consensus 92 L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 92 LSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CCSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred ccCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 999999864 3689999999999999999954 4 38999999999999999998755 8899999999999999998
Q ss_pred hhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCC
Q 045493 607 EISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGS 679 (1048)
Q Consensus 607 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~ 679 (1048)
..+ +..+++|+.|++++|++++..+ +..+++|++|+|++|++++..+ +..++.|+.|++++|++++.
T Consensus 166 ~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 166 LTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred Chh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 765 8899999999999999986543 8899999999999999997764 88999999999999999874
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=3.7e-24 Score=244.66 Aligned_cols=270 Identities=20% Similarity=0.232 Sum_probs=149.7
Q ss_pred CCCcchhccCCCCeEeccCCccccCcChh----hhccCCCcEEEeecccc---cCCchhhhhhhcccceeeccccccCCC
Q 045493 343 SIPEELGRLKSLSQLSLSVNKLNGSIPHC----LGNLSNLKFFALRENEL---SGSIPQEIENMKKLNKYLLFENQFTGY 415 (1048)
Q Consensus 343 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~----l~~l~~L~~L~L~~n~l---~~~~p~~~~~l~~L~~l~l~~N~l~~~ 415 (1048)
.++..+..+++|++|+|++|.++...+.. +..+++|+.|+|++|.+ ++.+|..+..+.
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~--------------- 87 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLL--------------- 87 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHH---------------
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHH---------------
Confidence 45667777788888888888877654333 55677888888877543 334444442221
Q ss_pred CCcccccCCcccEEEeecccccC----CCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCccccc
Q 045493 416 LPQNVCQSGSLTHFSVRNNNFVG----PIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSN 491 (1048)
Q Consensus 416 ~~~~~~~~~~L~~L~l~~N~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~ 491 (1048)
..+..+++|++|++++|.++. .+|..+..+++|++|+|++|.++......+.. .
T Consensus 88 --~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------~ 145 (386)
T 2ca6_A 88 --QALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--------------------A 145 (386)
T ss_dssp --HHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--------------------H
T ss_pred --HHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH--------------------H
Confidence 112233344444444444443 23334444445555555555444322222211 1
Q ss_pred ccCC---------CCccEEEecCcccC-cccC---ccccccCCCcEEEcccCcccC-----CcCccccCCCccCEEeecC
Q 045493 492 WIKC---------PQLATLNMGGNEIS-GTIP---SEIGNMTQLHKLDFSSNRLVG-----QIPKQLGKLTSLTSLTLNG 553 (1048)
Q Consensus 492 ~~~~---------~~L~~L~L~~N~i~-~~~~---~~~~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~L~~ 553 (1048)
+..+ ++|++|++++|.++ ...+ ..+..+++|++|+|++|+++. ..+..+..+++|++|+|++
T Consensus 146 l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~ 225 (386)
T 2ca6_A 146 LQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQD 225 (386)
T ss_dssp HHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCS
T ss_pred HHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcC
Confidence 1111 45555555555554 2222 244455666666666666652 2233556666667777776
Q ss_pred cccc----CCCccccccccccceeecccCccccc----ccccccc--cccccccccccccccch----hhhhh-cccccc
Q 045493 554 NQLS----GDIPLELGLLAELGYLDLSANRLSKL----IPKNLGE--LRKLHHLNLSNNQFSQE----ISIQI-GKLVQL 618 (1048)
Q Consensus 554 N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~l~~--l~~L~~L~Ls~N~l~~~----~~~~~-~~l~~L 618 (1048)
|.++ ..+|..+..+++|++|+|++|+|+.. .+..+.. +++|++|+|++|+|++. .+..+ ..+++|
T Consensus 226 n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L 305 (386)
T 2ca6_A 226 NTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDL 305 (386)
T ss_dssp SCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTC
T ss_pred CCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCc
Confidence 6664 34566666677777777777777654 3444432 67777778888877762 33333 557888
Q ss_pred CeEECCCCcccCcCC--cCcC-CccccCeEECCC
Q 045493 619 SKLDLSHNSLGGNIP--SEIC-NLESLEYMNLLQ 649 (1048)
Q Consensus 619 ~~L~Ls~N~l~~~~~--~~~~-~l~~L~~L~L~~ 649 (1048)
+.|+|++|++++..+ ..+. .+++++.+.+..
T Consensus 306 ~~L~l~~N~l~~~~~~~~~l~~~l~~~~~~~l~~ 339 (386)
T 2ca6_A 306 LFLELNGNRFSEEDDVVDEIREVFSTRGRGELDE 339 (386)
T ss_dssp CEEECTTSBSCTTSHHHHHHHHHHHHHTCCEECC
T ss_pred eEEEccCCcCCcchhHHHHHHHHhhhcCcchhhh
Confidence 888888888876553 2222 245555555544
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=8.1e-23 Score=225.77 Aligned_cols=203 Identities=23% Similarity=0.222 Sum_probs=151.9
Q ss_pred ccccceeEecCCccccCccccc--CCCCCCCeeeCcCCcccCccc----ccccCCCCccEEEecCcccCcccCccccccC
Q 045493 447 CTSLYSLRLERNQLTGNISEVF--GIYPDLELLDLSNNNFFGEIS----SNWIKCPQLATLNMGGNEISGTIPSEIGNMT 520 (1048)
Q Consensus 447 l~~L~~L~L~~n~l~~~~~~~~--~~~~~L~~L~Ls~n~l~~~~~----~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~ 520 (1048)
+++|++|++++|.+++..+..+ ..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+++..+..|+.++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4557777777777776666665 667777777777777775433 3344678888888888888877778888888
Q ss_pred CCcEEEcccCcccCC--c--CccccCCCccCEEeecCccccCCCcc----ccccccccceeecccCccccccccccccc-
Q 045493 521 QLHKLDFSSNRLVGQ--I--PKQLGKLTSLTSLTLNGNQLSGDIPL----ELGLLAELGYLDLSANRLSKLIPKNLGEL- 591 (1048)
Q Consensus 521 ~L~~L~Ls~N~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l- 591 (1048)
+|++|+|++|++.+. . +..+..+++|++|+|++|+++ .++. .++.+++|++|||++|+|++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 888888888887542 1 233467888888888888887 3333 25677888889999998888877777666
Q ss_pred --ccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCC
Q 045493 592 --RKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGP 655 (1048)
Q Consensus 592 --~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 655 (1048)
++|++|+|++|+|+.++. .+. ++|++|||++|+|++. |. +..+++|++|+|++|+|+..
T Consensus 249 ~~~~L~~L~Ls~N~l~~lp~-~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~~ 309 (310)
T 4glp_A 249 WSSALNSLNLSFAGLEQVPK-GLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLVP 309 (310)
T ss_dssp CCTTCCCEECCSSCCCSCCS-CCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSCC
T ss_pred CcCcCCEEECCCCCCCchhh-hhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCCC
Confidence 689999999999886533 332 7899999999999854 33 67789999999999999743
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=1.4e-23 Score=235.26 Aligned_cols=251 Identities=16% Similarity=0.241 Sum_probs=194.4
Q ss_pred cccEEEeecccccCCCCCCcccc--cccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCc-ccccccCCCCccEE
Q 045493 425 SLTHFSVRNNNFVGPIPRSLQNC--TSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGE-ISSNWIKCPQLATL 501 (1048)
Q Consensus 425 ~L~~L~l~~N~l~~~~~~~l~~l--~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~-~~~~~~~~~~L~~L 501 (1048)
.++.+++++|.+. +..+..+ ++++.|++++|.+.+..+..+ .+++|+.|++++|.+++. .+..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~-~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHF-SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCC-CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhc-cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3567777777665 4456666 778888888888887766644 578888888888888765 66677888899999
Q ss_pred EecCcccCcccCccccccCCCcEEEcccC-cccCC-cCccccCCCccCEEeecCc-cccCC-Ccccccccc-ccceeecc
Q 045493 502 NMGGNEISGTIPSEIGNMTQLHKLDFSSN-RLVGQ-IPKQLGKLTSLTSLTLNGN-QLSGD-IPLELGLLA-ELGYLDLS 576 (1048)
Q Consensus 502 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~Ls 576 (1048)
++++|.+++..+..++.+++|++|++++| .+++. .+..+..+++|++|++++| .+++. ++..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999888778888888899999999998 67652 5666778889999999999 88753 566788888 99999999
Q ss_pred cC--ccc-cccccccccccccccccccccc-ccchhhhhhccccccCeEECCCCc-ccCcCCcCcCCccccCeEECCCCc
Q 045493 577 AN--RLS-KLIPKNLGELRKLHHLNLSNNQ-FSQEISIQIGKLVQLSKLDLSHNS-LGGNIPSEICNLESLEYMNLLQNK 651 (1048)
Q Consensus 577 ~N--~l~-~~~~~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~ 651 (1048)
+| .++ ...+..+..+++|++|++++|. +++.....+..+++|++|++++|. +.......+.++++|++|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 454 3446677888999999999999 777777888899999999999995 43333346788999999999999
Q ss_pred ccCCcccccccc-CCccEEEeccceecCCCCCc
Q 045493 652 LSGPIPSCFRRM-HGLSSIDVSYNELQGSIPHS 683 (1048)
Q Consensus 652 l~~~~~~~~~~l-~~L~~l~ls~N~l~~~~p~~ 683 (1048)
++.. .+..+ ..++.|++++|++++..|..
T Consensus 283 i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 283 VPDG---TLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp SCTT---CHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred cCHH---HHHHHHhhCcceEEecccCccccCCc
Confidence 5433 33333 23667779999999988764
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=2.8e-22 Score=225.36 Aligned_cols=113 Identities=19% Similarity=0.142 Sum_probs=65.0
Q ss_pred cCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCC-CcCCCCCCCCcE-EeCCCCcCCCCCccccc
Q 045493 16 QEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGII-PPQIGILTNLVV-LRLSVNQLNGLIPEELG 93 (1048)
Q Consensus 16 ~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~-p~~~~~l~~L~~-L~ls~n~l~~~~~~~~~ 93 (1048)
+++|..+++++++|+|++|+|+++.+.+|+++++|++|+|++|++.+.+ +.+|.++++|++ +.+++|+|+++.|+.|.
T Consensus 22 t~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~ 101 (350)
T 4ay9_X 22 TEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQ 101 (350)
T ss_dssp CSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBC
T ss_pred CccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhh
Confidence 4555555666666666666666555556666666666666666654333 345566665553 44455666655555566
Q ss_pred cccccccccccceecccccCcCcCCcCCCceEEee
Q 045493 94 ELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLS 128 (1048)
Q Consensus 94 ~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~ 128 (1048)
++++|++|++++|+++...+..+....++..|++.
T Consensus 102 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~ 136 (350)
T 4ay9_X 102 NLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQ 136 (350)
T ss_dssp CCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEE
T ss_pred hccccccccccccccccCCchhhcccchhhhhhhc
Confidence 66666666666666655444455555555555553
No 346
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.3e-21 Score=208.89 Aligned_cols=159 Identities=25% Similarity=0.279 Sum_probs=114.8
Q ss_pred CccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecc
Q 045493 497 QLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLS 576 (1048)
Q Consensus 497 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 576 (1048)
+++.|++++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 55556666666665555566666666666666666666666666666666666666666665555666667777777777
Q ss_pred cCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCC
Q 045493 577 ANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGP 655 (1048)
Q Consensus 577 ~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 655 (1048)
+|+|+++.+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 7777766666677777777777777777777776777888888888888888877777888888899999999988866
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1e-21 Score=220.72 Aligned_cols=247 Identities=18% Similarity=0.175 Sum_probs=192.4
Q ss_pred cccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcc-cccccCCCCc
Q 045493 420 VCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEI-SSNWIKCPQL 498 (1048)
Q Consensus 420 ~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~-~~~~~~~~~L 498 (1048)
+|.+. -++++.++++++. +|..+ .+++++|+|++|+|+.+++.+|..+++|++|+|++|++.+.+ +.+|.+++++
T Consensus 6 ~C~C~-~~~v~C~~~~Lt~-iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l 81 (350)
T 4ay9_X 6 ICHCS-NRVFLCQESKVTE-IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKL 81 (350)
T ss_dssp SSEEE-TTEEEEESTTCCS-CCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTC
T ss_pred ccEee-CCEEEecCCCCCc-cCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhh
Confidence 34442 3567888888884 55555 257899999999999999899999999999999999986644 4678888887
Q ss_pred cE-EEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecC-ccccCCCcccccccc-ccceeec
Q 045493 499 AT-LNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNG-NQLSGDIPLELGLLA-ELGYLDL 575 (1048)
Q Consensus 499 ~~-L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L 575 (1048)
++ +.+++|+++...|..|..+++|++|++++|++++..+..+....++..|++.+ |.++...+..|..+. .++.|+|
T Consensus 82 ~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L 161 (350)
T 4ay9_X 82 HEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWL 161 (350)
T ss_dssp CEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEEC
T ss_pred hhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcc
Confidence 75 66777999988888999999999999999999977777777788888898865 667755556677664 6889999
Q ss_pred ccCcccccccccccccccccccccc-cccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccC
Q 045493 576 SANRLSKLIPKNLGELRKLHHLNLS-NNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSG 654 (1048)
Q Consensus 576 s~N~l~~~~~~~l~~l~~L~~L~Ls-~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 654 (1048)
++|+|+.+.+..|. ..+|++|+++ +|.++.+....|..+++|++|||++|+|+...+..|.+ |+.|.+.++.--.
T Consensus 162 ~~N~i~~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~ 237 (350)
T 4ay9_X 162 NKNGIQEIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLK 237 (350)
T ss_dssp CSSCCCEECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCC
T ss_pred ccccccCCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcC
Confidence 99999988666665 4689999997 57888888888999999999999999999655555554 5555544443333
Q ss_pred CccccccccCCccEEEeccce
Q 045493 655 PIPSCFRRMHGLSSIDVSYNE 675 (1048)
Q Consensus 655 ~~~~~~~~l~~L~~l~ls~N~ 675 (1048)
..| .+.++++|+.++++++-
T Consensus 238 ~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 238 KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CCC-CTTTCCSCCEEECSCHH
T ss_pred cCC-CchhCcChhhCcCCCCc
Confidence 555 47889999999998663
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=8.3e-23 Score=228.95 Aligned_cols=211 Identities=18% Similarity=0.250 Sum_probs=102.7
Q ss_pred ccccceeEecCCccccC-cccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCc-ccCcc-cCccccccCCCc
Q 045493 447 CTSLYSLRLERNQLTGN-ISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGN-EISGT-IPSEIGNMTQLH 523 (1048)
Q Consensus 447 l~~L~~L~L~~n~l~~~-~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N-~i~~~-~~~~~~~l~~L~ 523 (1048)
+++|++|++++|.+++. .+..+..+++|+.|+|++|.+++..+..+..+++|++|++++| .+++. ++..+..+++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 33444444444443322 2333444444444444444444444444444455555555554 34431 333344555555
Q ss_pred EEEcccC-cccCC-cCccccCCC-ccCEEeecCc--ccc-CCCccccccccccceeecccCc-ccccccccccccccccc
Q 045493 524 KLDFSSN-RLVGQ-IPKQLGKLT-SLTSLTLNGN--QLS-GDIPLELGLLAELGYLDLSANR-LSKLIPKNLGELRKLHH 596 (1048)
Q Consensus 524 ~L~Ls~N-~l~~~-~~~~~~~l~-~L~~L~L~~N--~l~-~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~ 596 (1048)
+|++++| .+++. .+..+..++ +|++|++++| .++ +.++..+..+++|++|++++|. +++..+..+..+++|++
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 5555555 55432 234444555 5555555555 232 2334444555555555555555 44444455555566666
Q ss_pred cccccc-cccchhhhhhccccccCeEECCCCcccCcCCcCcCCc-cccCeEECCCCcccCCcccccc
Q 045493 597 LNLSNN-QFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNL-ESLEYMNLLQNKLSGPIPSCFR 661 (1048)
Q Consensus 597 L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~ 661 (1048)
|++++| .++......++.+++|+.|++++| ++. ..+..+ .+++.|++++|++++..|..+.
T Consensus 252 L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 252 LSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred eeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCccc
Confidence 666665 333333334555666666666666 321 122333 2355556666666666665544
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=7.7e-21 Score=196.65 Aligned_cols=172 Identities=28% Similarity=0.354 Sum_probs=114.4
Q ss_pred ecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccc
Q 045493 15 LQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGE 94 (1048)
Q Consensus 15 ~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 94 (1048)
++++|...++++++|+|++|++++..+..|+.+++|++|+|++|+++++.+..|+.+++|++|+|++|+++++.+..|..
T Consensus 19 l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 98 (208)
T 2o6s_A 19 RTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDK 98 (208)
T ss_dssp CSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcC
Confidence 45566666677777777777777666666777777777777777777655556677777777777777777666666666
Q ss_pred ccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccc
Q 045493 95 LTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGV 174 (1048)
Q Consensus 95 l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~ 174 (1048)
+++|++|++++|++++..+..|..+++|++|++++|+++ +.
T Consensus 99 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~---------------------------------------~~ 139 (208)
T 2o6s_A 99 LTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK---------------------------------------SV 139 (208)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS---------------------------------------CC
T ss_pred ccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc---------------------------------------ee
Confidence 777777777777776555555666666666666666554 23
Q ss_pred cCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCC
Q 045493 175 IPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSN 232 (1048)
Q Consensus 175 ~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 232 (1048)
.+..|..+++|++|++++|.+.+ .+++|++|+++.|++++.+|..++.++.
T Consensus 140 ~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 140 PDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 33445666677777777776542 3456777777777777777766665543
No 350
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.83 E-value=3.7e-21 Score=208.06 Aligned_cols=148 Identities=14% Similarity=0.082 Sum_probs=111.8
Q ss_pred ccCCcceeeecccccccEEEEEEcCCCceeeEEeccCCCCcc-----------------cchhhHHHHHHhhcccCceee
Q 045493 775 STFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI-----------------GINQKGFVSEITEIRHRNIVK 837 (1048)
Q Consensus 775 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~-----------------~~~~~~~~~~l~~l~h~niv~ 837 (1048)
...+.....||+|+||.||+|.+.+++.||+|.++....... ......+...++.++ | ++
T Consensus 89 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~ 165 (282)
T 1zar_A 89 GKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA 165 (282)
T ss_dssp TSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred CeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence 334444567999999999999997789999999864322110 112345556667776 5 66
Q ss_pred EeeEeeeCCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCc
Q 045493 838 FYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYK 917 (1048)
Q Consensus 838 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~ 917 (1048)
+++++.. +..|+||||+++|+|.+ +.. .....++.|++.|++|||+. +|+||||||+||+++ ++.
T Consensus 166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~ 230 (282)
T 1zar_A 166 VPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEG 230 (282)
T ss_dssp SCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTE
T ss_pred cCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCc
Confidence 6666544 45699999999999988 421 23457999999999999999 999999999999999 999
Q ss_pred eEEeccccccccCCCCCCcccccccccccccccccc
Q 045493 918 AHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYT 953 (1048)
Q Consensus 918 ~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 953 (1048)
+||+|||+|+. +..|+|||++.+
T Consensus 231 vkl~DFG~a~~-------------~~~~~a~e~l~r 253 (282)
T 1zar_A 231 IWIIDFPQSVE-------------VGEEGWREILER 253 (282)
T ss_dssp EEECCCTTCEE-------------TTSTTHHHHHHH
T ss_pred EEEEECCCCeE-------------CCCCCHHHHHHH
Confidence 99999999863 345789998753
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=2.8e-20 Score=192.44 Aligned_cols=140 Identities=27% Similarity=0.283 Sum_probs=59.2
Q ss_pred ccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccccccccc
Q 045493 518 NMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHL 597 (1048)
Q Consensus 518 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 597 (1048)
.+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|+|+++.+..|..+++|++|
T Consensus 50 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 129 (208)
T 2o6s_A 50 ELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL 129 (208)
T ss_dssp TCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE
Confidence 33333333333333333333333333333333333333333323333334444444444444443333334444444444
Q ss_pred ccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccC
Q 045493 598 NLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMH 664 (1048)
Q Consensus 598 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 664 (1048)
++++|+|+++.+..+..+++|++|++++|.+.+ .+++|++|+++.|+++|.+|..++.++
T Consensus 130 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 130 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 444444444333344444455555555554432 234455555555555555555554443
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=7.4e-20 Score=215.81 Aligned_cols=189 Identities=24% Similarity=0.376 Sum_probs=132.6
Q ss_pred CCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEee
Q 045493 49 KLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLS 128 (1048)
Q Consensus 49 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~ 128 (1048)
+|++|+|++|.+++ +|..+. ++|++|+|++|+|++ +| ..+++|++|++++|++++ +|. |.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 66677777766664 555442 566777777776664 34 335666677777776664 444 544 67777777
Q ss_pred cccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccc
Q 045493 129 NNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRS 208 (1048)
Q Consensus 129 ~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~ 208 (1048)
+|++++ +|. .+++|+.|++++|.+++ +|. .+++|+.|+|++|++++ +|. |. ++
T Consensus 129 ~N~l~~----------------lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~ 181 (571)
T 3cvr_A 129 NNQLTM----------------LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ES 181 (571)
T ss_dssp SSCCSC----------------CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TT
T ss_pred CCcCCC----------------CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CC
Confidence 776653 222 35566677777777765 343 56788899999999885 565 65 88
Q ss_pred cceeccccccccccCCccCcCCCCC-------CeEeccCCccCCCCCcccccccccceeecccccccCCCchhhhccch
Q 045493 209 LSYLGLNKNQLSGSIPPTAGNLSNL-------KFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSS 280 (1048)
Q Consensus 209 L~~L~L~~n~l~~~~~~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~ 280 (1048)
|++|+|++|+++ .+|. +.. +| ++|+|++|.|+ .+|..+..+++|+.|+|++|++++..|..|..+..
T Consensus 182 L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 182 LEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred CCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 999999999988 5666 554 67 99999999999 57888888999999999999998888877766554
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=5.2e-20 Score=217.13 Aligned_cols=151 Identities=25% Similarity=0.336 Sum_probs=81.2
Q ss_pred CCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeec
Q 045493 496 PQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDL 575 (1048)
Q Consensus 496 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 575 (1048)
++|++|++++|.|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 167 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSV 167 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEEC
Confidence 444444444444443 333 332 45555555555543 222 34455555555555543 332 3445555555
Q ss_pred ccCcccccccccccccccccccccccccccchhhhhhcc-----ccccCeEECCCCcccCcCCcCcCCccccCeEECCCC
Q 045493 576 SANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGK-----LVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQN 650 (1048)
Q Consensus 576 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 650 (1048)
++|+|+++ |. |. ++|+.|+|++|+|+.++. +.. ...|+.|+|++|+|+ .+|..+..+++|+.|+|++|
T Consensus 168 s~N~L~~l-p~-l~--~~L~~L~Ls~N~L~~lp~--~~~~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N 240 (571)
T 3cvr_A 168 RNNQLTFL-PE-LP--ESLEALDVSTNLLESLPA--VPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDN 240 (571)
T ss_dssp CSSCCSCC-CC-CC--TTCCEEECCSSCCSSCCC--CC--------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSS
T ss_pred CCCCCCCc-ch-hh--CCCCEEECcCCCCCchhh--HHHhhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCC
Confidence 55555543 22 33 455555555555543332 222 122378888888887 56777777888888888888
Q ss_pred cccCCccccccccCC
Q 045493 651 KLSGPIPSCFRRMHG 665 (1048)
Q Consensus 651 ~l~~~~~~~~~~l~~ 665 (1048)
+|++.+|..+..+..
T Consensus 241 ~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 241 PLSSRIRESLSQQTA 255 (571)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred cCCCcCHHHHHHhhc
Confidence 888877777766543
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=6.9e-20 Score=199.74 Aligned_cols=150 Identities=25% Similarity=0.392 Sum_probs=70.6
Q ss_pred cccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccc
Q 045493 517 GNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHH 596 (1048)
Q Consensus 517 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 596 (1048)
..+++|++|+|++|++++..+ +..+++|++|+|++|++++ ++ .+..+++|++|++++|+|+++ ..+..+++|+.
T Consensus 65 ~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~ 138 (291)
T 1h6t_A 65 QYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLES 138 (291)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCE
T ss_pred hcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCE
Confidence 334444444444444433222 3444444444444444432 11 244444444444444444443 23444444555
Q ss_pred cccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEecccee
Q 045493 597 LNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNEL 676 (1048)
Q Consensus 597 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l 676 (1048)
|++++|++++. ..+..+++|++|++++|++++..+ +..+++|++|++++|+|++. + .+..++.|+.|++++|++
T Consensus 139 L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i 212 (291)
T 1h6t_A 139 LYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQEC 212 (291)
T ss_dssp EECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEE
T ss_pred EEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcc
Confidence 55555554443 334455555555555555554332 55555555555555555543 2 255556666666666665
Q ss_pred cC
Q 045493 677 QG 678 (1048)
Q Consensus 677 ~~ 678 (1048)
+.
T Consensus 213 ~~ 214 (291)
T 1h6t_A 213 LN 214 (291)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=4.2e-20 Score=220.62 Aligned_cols=204 Identities=27% Similarity=0.378 Sum_probs=148.9
Q ss_pred CCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccc
Q 045493 19 PFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSL 98 (1048)
Q Consensus 19 p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L 98 (1048)
|-..+.++..+.|+.+.+++..+ +..|++|+.|+|++|.|+. +| .|+.+++|+.|+|++|+|+++.| |..+++|
T Consensus 16 pd~~l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L 89 (605)
T 1m9s_A 16 PDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNL 89 (605)
T ss_dssp CSHHHHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTC
T ss_pred CcHHHHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCC
Confidence 33344567777888888876544 5778889999999999884 44 68889999999999999987654 8888888
Q ss_pred ccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCC
Q 045493 99 NELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRS 178 (1048)
Q Consensus 99 ~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~ 178 (1048)
++|+|++|+++. +| .+..+++|+.|+|++|++++ . +.
T Consensus 90 ~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~---------------------------------------l--~~ 126 (605)
T 1m9s_A 90 GWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD---------------------------------------I--NG 126 (605)
T ss_dssp CEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC---------------------------------------C--GG
T ss_pred CEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC---------------------------------------C--cc
Confidence 888888888874 33 67888888888888887652 1 23
Q ss_pred CCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccc
Q 045493 179 LGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLL 258 (1048)
Q Consensus 179 ~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 258 (1048)
+..+++|+.|+|++|+++++ ..+..+++|++|+|++|++.+..| +..+++|+.|+|++|.|++ + ..+..+++|+
T Consensus 127 l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l-~~l~~l~~L~ 200 (605)
T 1m9s_A 127 LVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-L-RALAGLKNLD 200 (605)
T ss_dssp GGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-C-GGGTTCTTCS
T ss_pred ccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-C-hHHccCCCCC
Confidence 55667777777777777654 567777777777777777775444 7777788888888887774 3 3577778888
Q ss_pred eeecccccccCCCchhhhc
Q 045493 259 YLYLSHNQLNGSLPSSFGN 277 (1048)
Q Consensus 259 ~L~L~~n~l~~~~p~~~~~ 277 (1048)
.|+|++|++.+.....+..
T Consensus 201 ~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 201 VLELFSQECLNKPINHQSN 219 (605)
T ss_dssp EEECCSEEEECCCCCCCSS
T ss_pred EEEccCCcCcCCccccccc
Confidence 8888888777544333333
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=9.7e-20 Score=205.47 Aligned_cols=179 Identities=26% Similarity=0.257 Sum_probs=113.1
Q ss_pred EEEecCcccCcccCccccccCCCcEEEcccCcccCCcCcccc-CCCccCEEeecCccccCCCccccccccccceeecccC
Q 045493 500 TLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLG-KLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSAN 578 (1048)
Q Consensus 500 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 578 (1048)
.+++++|.++ .+|..+. +.++.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 4555555555 2333322 2355666666666655555555 5666666666666666555555666666666666666
Q ss_pred cccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCc---CCccccCeEECCCCcccCC
Q 045493 579 RLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEI---CNLESLEYMNLLQNKLSGP 655 (1048)
Q Consensus 579 ~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~ 655 (1048)
+|+.+.+..|..+++|++|+|++|+|+.+.+..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 6666666666666666677777777666666666777777777777777765444444 4577777777777777766
Q ss_pred ccccccccCC--ccEEEeccceecCCCC
Q 045493 656 IPSCFRRMHG--LSSIDVSYNELQGSIP 681 (1048)
Q Consensus 656 ~~~~~~~l~~--L~~l~ls~N~l~~~~p 681 (1048)
.+..+..++. ++.|++++|+|.+.+.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CHHHhhhccHhhcceEEecCCCccCCcC
Confidence 6667777766 3778888888776543
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=2.5e-19 Score=195.37 Aligned_cols=198 Identities=22% Similarity=0.317 Sum_probs=169.4
Q ss_pred ccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEE
Q 045493 447 CTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLD 526 (1048)
Q Consensus 447 l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 526 (1048)
+..+..+.+..+.++++.. +..+++|+.|++++|.+... ..+..+++|++|++++|.+++..+ +..+++|++|+
T Consensus 23 l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~ 96 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLF 96 (291)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HHHHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEE
Confidence 4456666777777765432 34678999999999999865 348889999999999999997655 89999999999
Q ss_pred cccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccc
Q 045493 527 FSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQ 606 (1048)
Q Consensus 527 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 606 (1048)
+++|++++ + ..+..+++|++|+|++|++++. ..+..+++|++|++++|+++++ ..+..+++|++|++++|+|++
T Consensus 97 l~~n~l~~-~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 97 LDENKVKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp CCSSCCCC-G-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CCCCcCCC-C-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc
Confidence 99999986 3 3489999999999999999964 5788999999999999999987 679999999999999999998
Q ss_pred hhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccc
Q 045493 607 EISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCF 660 (1048)
Q Consensus 607 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 660 (1048)
..+ +..+++|+.|++++|+|++. + .+..+++|+.|++++|+++......+
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~~~~~~ 220 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPINHQ 220 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECCCEECC
T ss_pred chh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCCccccc
Confidence 766 88999999999999999853 3 48999999999999999986554443
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2.1e-19 Score=187.09 Aligned_cols=157 Identities=19% Similarity=0.268 Sum_probs=110.6
Q ss_pred cEEEcccCcccCCcCccccCCCccCEEeecCccccCCCc-cccccccccceeecccCccccccccccccccccccccccc
Q 045493 523 HKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIP-LELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSN 601 (1048)
Q Consensus 523 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~ 601 (1048)
+.+++++|.++. +|..+. +.+++|+|++|++++..+ ..|..+++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 355566665553 343332 234566666666664433 3456666777777777777766666677777777777777
Q ss_pred ccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCC
Q 045493 602 NQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIP 681 (1048)
Q Consensus 602 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p 681 (1048)
|+|+++.+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|++++|+|++.++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 77777777777777788888888888887777788888888888888888887778888888888888888888887766
Q ss_pred C
Q 045493 682 H 682 (1048)
Q Consensus 682 ~ 682 (1048)
.
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 3
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=2.2e-19 Score=186.97 Aligned_cols=136 Identities=23% Similarity=0.304 Sum_probs=80.2
Q ss_pred ccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECC
Q 045493 545 SLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLS 624 (1048)
Q Consensus 545 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 624 (1048)
+|++|+|++|+|++..+..|..+++|++|+|++|+|+++.|..|.++++|++|+|++|+|+.+.+..|..+++|++|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 44555555555544334445555555555555555555555555555555555555555555555555566666666666
Q ss_pred CCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCC
Q 045493 625 HNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSI 680 (1048)
Q Consensus 625 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~ 680 (1048)
+|+|++..+..|..+++|++|+|++|+|++..+..|..++.|++|++++|+|.+..
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 66666666666666666666666666666666666666666666666666666543
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=2.9e-19 Score=213.36 Aligned_cols=188 Identities=21% Similarity=0.283 Sum_probs=98.3
Q ss_pred cEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCc
Q 045493 427 THFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGN 506 (1048)
Q Consensus 427 ~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N 506 (1048)
..+.+..+.+....+ +..+++|+.|++++|.+..++ .+..+++|+.|+|++|++.+..+ +..+++|+.|+|++|
T Consensus 24 ~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 24 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred HHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCC
Confidence 334444444443322 345555666666666655443 34555556666666665554433 555555555555555
Q ss_pred ccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccc
Q 045493 507 EISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPK 586 (1048)
Q Consensus 507 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 586 (1048)
.|++. + .+..+++|+.|+|++|++.+. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+|+++.|
T Consensus 98 ~l~~l-~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 98 KIKDL-S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp CCCCC-T-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCCC-h-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 55532 2 455555555555555555532 2355555555555555555533 345555555555555555555443
Q ss_pred cccccccccccccccccccchhhhhhccccccCeEECCCCcccC
Q 045493 587 NLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGG 630 (1048)
Q Consensus 587 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 630 (1048)
+..+++|+.|+|++|+|+++ ..+..+++|+.|+|++|++.+
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred -hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 55555555555555555543 234455555555555555554
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=9e-19 Score=183.66 Aligned_cols=155 Identities=27% Similarity=0.296 Sum_probs=97.3
Q ss_pred cEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccc
Q 045493 523 HKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNN 602 (1048)
Q Consensus 523 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N 602 (1048)
+.++.++++++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+|+.+.+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 34455555544 2333222 45555555555555555555555555555555555555555555566666666666666
Q ss_pred cccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCC
Q 045493 603 QFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIP 681 (1048)
Q Consensus 603 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p 681 (1048)
+|+++.+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..++.|+.|++++|+|.+.++
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 666655556666677777777777776 566667777777777777777776666667777777777777777777665
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=7.1e-19 Score=183.13 Aligned_cols=153 Identities=22% Similarity=0.260 Sum_probs=104.3
Q ss_pred cEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccC
Q 045493 499 ATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSAN 578 (1048)
Q Consensus 499 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 578 (1048)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 34555555555 3333332 45666666666666555556666666666666666666555666666666777777777
Q ss_pred cccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccC
Q 045493 579 RLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSG 654 (1048)
Q Consensus 579 ~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 654 (1048)
+|+.+++..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 7766666666677777777777777777767777777788888888888887777778888888888888888864
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=6.6e-19 Score=198.62 Aligned_cols=174 Identities=26% Similarity=0.215 Sum_probs=79.7
Q ss_pred eeEecCCccccCcccccCCCCCCCeeeCcCCcccCccccccc-CCCCccEEEecCcccCcccCccccccCCCcEEEcccC
Q 045493 452 SLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWI-KCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSN 530 (1048)
Q Consensus 452 ~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~-~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N 530 (1048)
.++++++.++.++.... +.++.|+|++|+|++..+..|. .+++|++|+|++|.|++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPNVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSSCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 34444444444433221 2344555555555444444444 4455555555555555444444555555555555555
Q ss_pred cccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccc---cccccccccccccccccch
Q 045493 531 RLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNL---GELRKLHHLNLSNNQFSQE 607 (1048)
Q Consensus 531 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l---~~l~~L~~L~Ls~N~l~~~ 607 (1048)
+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|+.+.+..| ..+++|+.|+|++|+|+.+
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 5554444445555555555555555554444445555555555555555554433333 2344444444444444443
Q ss_pred hhhhhccccc--cCeEECCCCcc
Q 045493 608 ISIQIGKLVQ--LSKLDLSHNSL 628 (1048)
Q Consensus 608 ~~~~~~~l~~--L~~L~Ls~N~l 628 (1048)
....+..++. |+.|+|++|.+
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~ 201 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPL 201 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCE
T ss_pred CHHHhhhccHhhcceEEecCCCc
Confidence 3333333333 23444444443
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=9.8e-19 Score=182.05 Aligned_cols=155 Identities=21% Similarity=0.229 Sum_probs=107.2
Q ss_pred EEEecCcccCcccCccccccCCCcEEEcccCcccCCcC-ccccCCCccCEEeecCccccCCCccccccccccceeecccC
Q 045493 500 TLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIP-KQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSAN 578 (1048)
Q Consensus 500 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 578 (1048)
.+++++|.++ .+|..+. +.+++|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 5555555555 2343332 234566666666665433 34566666666666666666555556667777777777777
Q ss_pred cccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCcc
Q 045493 579 RLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIP 657 (1048)
Q Consensus 579 ~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 657 (1048)
+|+++.+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++++..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 7777666667777777777777777777777777778888888888888887778888888888888888888876544
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=4.5e-19 Score=190.11 Aligned_cols=171 Identities=22% Similarity=0.314 Sum_probs=86.7
Q ss_pred cccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEE
Q 045493 446 NCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKL 525 (1048)
Q Consensus 446 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 525 (1048)
.+.++..+++++|.++++. .+..+++|+.|++++|+++... .+..+++|++|++++|+|++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4555666666666666544 3445566666666666665322 34555555555555555554333 5555555555
Q ss_pred EcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccccccccccccccccc
Q 045493 526 DFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFS 605 (1048)
Q Consensus 526 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 605 (1048)
+|++|++++. +. +.. ++|++|+|++|++++. + .+..+++|++|++++|+|+++
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~---------------------- 143 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI---------------------- 143 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC----------------------
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC----------------------
Confidence 5555555532 21 111 4555555555555421 1 344444444444444444443
Q ss_pred chhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCC
Q 045493 606 QEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGP 655 (1048)
Q Consensus 606 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 655 (1048)
. .+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 144 --~--~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 --V--MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp --G--GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred --h--HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 1 344444555555555555433 3444555555555555555543
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=6.6e-18 Score=177.07 Aligned_cols=105 Identities=28% Similarity=0.296 Sum_probs=66.9
Q ss_pred ccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccccc
Q 045493 26 LAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSY 105 (1048)
Q Consensus 26 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~ 105 (1048)
.+.+++++++++ .+|..+. ++|++|+|++|+|+++.|..|+.+++|++|+|++|+|+.+.+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345666666666 4443333 5666666666666666666666666666666666666665555566666666666666
Q ss_pred eecccccCcCcCCcCCCceEEeeccccc
Q 045493 106 NRLNGSIPASLGNLSNLVQLSLSNNSLS 133 (1048)
Q Consensus 106 n~~~~~~~~~~~~L~~L~~L~l~~n~l~ 133 (1048)
|++++..+..|..+++|+.|+|++|+++
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT 125 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc
Confidence 6666555556666666666666666654
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=5.1e-18 Score=173.54 Aligned_cols=154 Identities=18% Similarity=0.248 Sum_probs=96.9
Q ss_pred cccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccc
Q 045493 517 GNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHH 596 (1048)
Q Consensus 517 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 596 (1048)
+.+++|+.|++++|.++ .++ .+..+++|++|++++|.++ . +..+..+++|++|++++|++++..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44555666666666665 233 4555666666666666554 2 235566666666666666666655666666677777
Q ss_pred cccccccccchhhhhhccccccCeEECCCCc-ccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccce
Q 045493 597 LNLSNNQFSQEISIQIGKLVQLSKLDLSHNS-LGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNE 675 (1048)
Q Consensus 597 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~ 675 (1048)
|++++|++++..+..++.+++|++|++++|+ ++ .++ .+..+++|++|++++|++++.. .+..++.|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 7777777766666666777777777777776 54 333 5667777777777777776533 56677777777777777
Q ss_pred ecC
Q 045493 676 LQG 678 (1048)
Q Consensus 676 l~~ 678 (1048)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 643
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=2.5e-18 Score=184.30 Aligned_cols=170 Identities=21% Similarity=0.292 Sum_probs=131.7
Q ss_pred CCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceee
Q 045493 495 CPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLD 574 (1048)
Q Consensus 495 ~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 574 (1048)
+.++..+++++|.+++.. .+..+++|++|++++|+++. ++ .+..+++|++|+|++|++++..+ +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 344555666666666433 46677777777777777764 33 56777777778887777775433 77777888888
Q ss_pred cccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccC
Q 045493 575 LSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSG 654 (1048)
Q Consensus 575 Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 654 (1048)
|++|+|+++.+ +.. ++|++|+|++|+|++.. .+..+++|+.|+|++|+|++. + .+..+++|++|+|++|+|++
T Consensus 92 L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNLNG--IPS-ACLSRLFLDNNELRDTD--SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCCTT--CCC-SSCCEEECCSSCCSBSG--GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCcCc--ccc-CcccEEEccCCccCCCh--hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 88888877533 222 78888888888888753 588899999999999999864 3 68899999999999999997
Q ss_pred CccccccccCCccEEEeccceecCC
Q 045493 655 PIPSCFRRMHGLSSIDVSYNELQGS 679 (1048)
Q Consensus 655 ~~~~~~~~l~~L~~l~ls~N~l~~~ 679 (1048)
. ..+..++.|+.|++++|++++.
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h--HHhccCCCCCEEeCCCCcccCC
Confidence 7 7788999999999999999887
No 369
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1.2e-18 Score=194.02 Aligned_cols=221 Identities=13% Similarity=0.093 Sum_probs=137.8
Q ss_pred ccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCccc----CcccCccccccCCC
Q 045493 447 CTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEI----SGTIPSEIGNMTQL 522 (1048)
Q Consensus 447 l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i----~~~~~~~~~~l~~L 522 (1048)
|++|++|+|.+ .++.+...+|..+++|+.|++++|.+....+.+|..+.++..+.+..+.. ......+|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666666666 66666666666666677777776666666666666666666665554221 22233445556666
Q ss_pred c-EEEcccCcc-cCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccc
Q 045493 523 H-KLDFSSNRL-VGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLS 600 (1048)
Q Consensus 523 ~-~L~Ls~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls 600 (1048)
+ .+++....- .......-....+++.+.+.++-...........+++|+.|+|++|+++.+.+.+|.++.+|+.|+|+
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 6 444443221 10011111123455666665542221111111236777777777777777777777777777777777
Q ss_pred cccccchhhhhhccccccC-eEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEE
Q 045493 601 NNQFSQEISIQIGKLVQLS-KLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSID 670 (1048)
Q Consensus 601 ~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ 670 (1048)
+| ++.+...+|.++.+|+ .+++.+ .++...+..|.++++|+.+++++|+++...+.+|..+++|+.|+
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 77 7777777777777787 788877 66666677777788888888878888777777787777777775
No 370
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1.8e-18 Score=192.53 Aligned_cols=287 Identities=12% Similarity=0.082 Sum_probs=212.3
Q ss_pred ccCCCCeEeccCCccccCcChhhhc-cCCCcEEEeeccccc--CCchhhhhhhcccceeeccccccCCCCCccccc----
Q 045493 350 RLKSLSQLSLSVNKLNGSIPHCLGN-LSNLKFFALRENELS--GSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQ---- 422 (1048)
Q Consensus 350 ~l~~L~~L~Ls~N~l~~~~~~~l~~-l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~---- 422 (1048)
.+.+++.|.++++ +.......+.. +++|+.|+|++|++. ...+..+ +.+..+.+..|.+ .+..|..
T Consensus 23 ~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~ 95 (329)
T 3sb4_A 23 EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNG 95 (329)
T ss_dssp HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETT
T ss_pred hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccc
Confidence 3678899999865 33222334555 788999999999998 2222222 2244445555533 3345666
Q ss_pred ----CCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCc----ccCcccccccC
Q 045493 423 ----SGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNN----FFGEISSNWIK 494 (1048)
Q Consensus 423 ----~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~----l~~~~~~~~~~ 494 (1048)
+++|+++++.+ +++.+.+.+|.+|++|++|++++|.+..+...+|....++..+.+..+. .......+|..
T Consensus 96 ~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~ 174 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIE 174 (329)
T ss_dssp EEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEE
T ss_pred cccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccc
Confidence 89999999999 8888888899999999999999999999999999988888888776633 23344566777
Q ss_pred CCCcc-EEEecCcc-cCcccCccccccCCCcEEEcccCcccCCcCccc-cCCCccCEEeecCccccCCCccccccccccc
Q 045493 495 CPQLA-TLNMGGNE-ISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQL-GKLTSLTSLTLNGNQLSGDIPLELGLLAELG 571 (1048)
Q Consensus 495 ~~~L~-~L~L~~N~-i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 571 (1048)
+..|+ .+.+.... +.......-....+++.+.+.++-.. .....+ ..+++|+.|+|++|.++...+.+|.++.+|+
T Consensus 175 ~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~ 253 (329)
T 3sb4_A 175 GEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLL 253 (329)
T ss_dssp SCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCC
T ss_pred ccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCC
Confidence 88887 55555322 11111111123567788888776332 112222 2478999999999999977777899999999
Q ss_pred eeecccCccccccccccccccccc-ccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEEC
Q 045493 572 YLDLSANRLSKLIPKNLGELRKLH-HLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNL 647 (1048)
Q Consensus 572 ~L~Ls~N~l~~~~~~~l~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 647 (1048)
.|+|++| ++.+.+.+|.++.+|+ .+++.+ .++.+...+|.++++|+.|++++|+++...+..|.++++|+.++.
T Consensus 254 ~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 254 KIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 9999998 8888889999999999 999988 888889999999999999999999999888889999999999874
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=2.5e-20 Score=221.35 Aligned_cols=190 Identities=22% Similarity=0.209 Sum_probs=134.9
Q ss_pred cCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCc-------------CCCCCcccccccccccccc-ccceeccc
Q 045493 45 SHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQ-------------LNGLIPEELGELTSLNELA-LSYNRLNG 110 (1048)
Q Consensus 45 ~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~-------------l~~~~~~~~~~l~~L~~L~-l~~n~~~~ 110 (1048)
...++|+.|+|++|+++ .+|..++.+++|++|++++|. +.+..|..+..+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 45667777777777776 567777777777777776664 4445566666666666666 555543
Q ss_pred ccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCCcceeec
Q 045493 111 SIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYL 190 (1048)
Q Consensus 111 ~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L 190 (1048)
..|..+.+++|.+++..+ ..|+.|+|++|.++++ |. |..+++|+.|+|
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~---------------------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~L 470 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY---------------------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDL 470 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH---------------------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEEC
T ss_pred ---------chhhhhhhhcccccccCc---------------------cCceEEEecCCCCCCC-cC-ccccccCcEeec
Confidence 234455566666552211 1366778888877763 44 888888888888
Q ss_pred cccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCC-CcccccccccceeecccccccC
Q 045493 191 NNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYI-PPKLGSFKSLLYLYLSHNQLNG 269 (1048)
Q Consensus 191 ~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~n~l~~ 269 (1048)
++|.|+ .+|..|+.+++|++|+|++|++++ +| .++.+++|++|+|++|.+++.. |..|+.+++|+.|+|++|++++
T Consensus 471 s~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 471 SHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp CSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred Cccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 888887 677788888888888888888874 55 7788888888888888888665 7788888888888888888875
Q ss_pred CCc
Q 045493 270 SLP 272 (1048)
Q Consensus 270 ~~p 272 (1048)
.+|
T Consensus 548 ~~~ 550 (567)
T 1dce_A 548 EEG 550 (567)
T ss_dssp SSS
T ss_pred Ccc
Confidence 544
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=7.6e-18 Score=172.26 Aligned_cols=152 Identities=16% Similarity=0.288 Sum_probs=95.1
Q ss_pred CCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCcccccccccccee
Q 045493 494 KCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYL 573 (1048)
Q Consensus 494 ~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 573 (1048)
.+++|++|++++|.|+ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..++.+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3455556666666665 333 45566666666666665542 2355666666666666666665555666666666666
Q ss_pred ecccCccccccccccccccccccccccccc-ccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcc
Q 045493 574 DLSANRLSKLIPKNLGELRKLHHLNLSNNQ-FSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKL 652 (1048)
Q Consensus 574 ~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 652 (1048)
++++|++++..+..+..+++|++|++++|+ +++.. .+..+++|++|++++|++++ ++ .+..+++|++|++++|+|
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~--~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM--PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG--GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH--hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCccc
Confidence 666666666556666666777777777776 55543 46677777777777777774 22 667777788888888877
Q ss_pred c
Q 045493 653 S 653 (1048)
Q Consensus 653 ~ 653 (1048)
.
T Consensus 194 ~ 194 (197)
T 4ezg_A 194 G 194 (197)
T ss_dssp -
T ss_pred C
Confidence 5
No 373
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=1.5e-19 Score=214.74 Aligned_cols=140 Identities=20% Similarity=0.189 Sum_probs=98.5
Q ss_pred ccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcc
Q 045493 449 SLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFS 528 (1048)
Q Consensus 449 ~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 528 (1048)
+|..+.+++|.++.++.. .|+.|+|++|+|++. |. +..+++|+.|+|++|.|+ .+|..|+.+++|+.|+|+
T Consensus 424 ~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls 494 (567)
T 1dce_A 424 DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQAS 494 (567)
T ss_dssp HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECC
T ss_pred hhhhhhhhcccccccCcc------CceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECC
Confidence 344445555555543321 367777777777653 43 777777888888888877 667778888888888888
Q ss_pred cCcccCCcCccccCCCccCEEeecCccccCCC-ccccccccccceeecccCcccccccc---ccccccccccccc
Q 045493 529 SNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDI-PLELGLLAELGYLDLSANRLSKLIPK---NLGELRKLHHLNL 599 (1048)
Q Consensus 529 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~---~l~~l~~L~~L~L 599 (1048)
+|+|++ +| .+..+++|++|+|++|+|++.. |..++.+++|+.|+|++|+|++.++. .+..+++|+.|++
T Consensus 495 ~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 495 DNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 888875 45 7778888888888888888665 77888888888888888888876542 2334677777754
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=1.4e-17 Score=169.38 Aligned_cols=129 Identities=26% Similarity=0.352 Sum_probs=67.4
Q ss_pred cEEEcccCcccCCcCccccCCCccCEEeecCccccCCCcc-ccccccccceeecccCccccccccccccccccccccccc
Q 045493 523 HKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPL-ELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSN 601 (1048)
Q Consensus 523 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~ 601 (1048)
+.+++++|+++ .+|..+.. +|++|++++|++++..+. .|..+++|++|+|++|+|+++.|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 55666666665 34433322 556666666666543332 255555555555555555555555555555555555555
Q ss_pred ccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccC
Q 045493 602 NQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSG 654 (1048)
Q Consensus 602 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 654 (1048)
|+|+++.+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 55555444444445555555555555554444444444455555555554443
No 375
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=1e-17 Score=205.52 Aligned_cols=196 Identities=23% Similarity=0.271 Sum_probs=104.5
Q ss_pred CCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEe
Q 045493 48 SKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSL 127 (1048)
Q Consensus 48 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l 127 (1048)
+.++.|+|++|.+.. .| ...|+.++|++|.|++ ++++.|++. ..|..|..+++|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~-~~-----~~~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-AN-----QALLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCc-ch-----hhHhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 346666666666663 22 2234555666665553 355566666 66777778888888888
Q ss_pred ecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCCcceeeccccCccccCCccccccc
Q 045493 128 SNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLR 207 (1048)
Q Consensus 128 ~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~ 207 (1048)
++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|+
T Consensus 232 s~n~l~----------------------------------------~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 232 SNLQIF----------------------------------------NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp TTSCCS----------------------------------------CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred CCCCCC----------------------------------------CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 877764 22333446778888888888887 6778888888
Q ss_pred ccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeecccccccCCCchhhhccchh-hhhhh
Q 045493 208 SLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSL-KHLHV 286 (1048)
Q Consensus 208 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L-~~L~l 286 (1048)
+|++|+|++|+++ .+|..++.|++|++|+|++|.|+ .+|..|+.+++|++|+|++|++++.+|..+..+... ..+++
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l 348 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYL 348 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhh
Confidence 8888888888888 67888888888888888888887 567778888888888888888888888777665432 34666
Q ss_pred ccccccCCCCCcccCCCCCCcEEEccCc
Q 045493 287 HNINKLSGSIPKEIGNLKSLSHLWLSKT 314 (1048)
Q Consensus 287 ~~~n~l~~~~~~~~~~l~~L~~L~L~~n 314 (1048)
.+ |.+++.+|. .|+.|+++.|
T Consensus 349 ~~-N~l~~~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 349 RD-NRPEIPLPH------ERRFIEINTD 369 (727)
T ss_dssp HH-CCCCCCCCC------C---------
T ss_pred cc-CcccCcCcc------ccceeEeecc
Confidence 66 677766665 4555666665
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=6.4e-17 Score=164.39 Aligned_cols=133 Identities=23% Similarity=0.360 Sum_probs=88.5
Q ss_pred CEEeecCccccCCCccccccccccceeecccCcccccccc-cccccccccccccccccccchhhhhhccccccCeEECCC
Q 045493 547 TSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPK-NLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSH 625 (1048)
Q Consensus 547 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 625 (1048)
+.+++++|+++ .+|..+.. +|++|++++|+|+++.+. .|..+++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56667777665 45554432 666777777777666553 366667777777777777666666666677777777777
Q ss_pred CcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCC
Q 045493 626 NSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682 (1048)
Q Consensus 626 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~ 682 (1048)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|++++|+|+|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 777666666666667777777777777766666666677777777777777666553
No 377
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.68 E-value=1.1e-16 Score=170.83 Aligned_cols=136 Identities=17% Similarity=0.165 Sum_probs=99.8
Q ss_pred cceeeecccccccEEEEEE-cCCCc--eeeEEeccCCCCcc-----------------------cchhhHHHHHHhhccc
Q 045493 779 GKMVLHGTGGCGTVYKAEL-TSGDT--RAVKKLHSLPTGEI-----------------------GINQKGFVSEITEIRH 832 (1048)
Q Consensus 779 ~~~~~lG~G~~g~Vy~~~~-~~~~~--vavk~~~~~~~~~~-----------------------~~~~~~~~~~l~~l~h 832 (1048)
.....||+|+||.||+|.+ .+|+. ||||.++....... ......+.+.+.+++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 3445789999999999988 57888 99998754321100 0123445666677777
Q ss_pred Cce--eeEeeEeeeCCeEEEEEEccCC-C----CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHH-hCCCCCeEeeC
Q 045493 833 RNI--VKFYGFCSHTQHLFLVYEYLER-G----SLATILSNEATAAELDWSKRVNVIKGVANALSYMH-HDCFPPILHRD 904 (1048)
Q Consensus 833 ~ni--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~iiH~D 904 (1048)
+++ ...+++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. +|+|||
T Consensus 130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 754 333332 346899999942 4 77776432 234567889999999999999 88 999999
Q ss_pred CCCCCeEECCCCceEEecccccccc
Q 045493 905 ISSKKVLLDLEYKAHVSDFGTAKFL 929 (1048)
Q Consensus 905 ik~~NIll~~~~~~kl~DfG~a~~~ 929 (1048)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 378
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.68 E-value=1.6e-17 Score=203.82 Aligned_cols=191 Identities=24% Similarity=0.241 Sum_probs=115.1
Q ss_pred CCccEEeCCCCcccccccccccCCCCCC-----EeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccc
Q 045493 24 PQLAYLDLSVNQLFGTIPTQISHLSKLK-----HLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSL 98 (1048)
Q Consensus 24 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~-----~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L 98 (1048)
+.++.|+|.+|.+... +..+.....|. .++++.|.+. ..|..|..+.+|+.|+|++|++.. +|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIFN-ISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCSC-CCGGGGGCCSC
T ss_pred CccceEEeeCCCCCcc-hhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCCC-CChhhcCCCCC
Confidence 6789999999999853 43332222222 2333445555 568889999999999999999995 56667799999
Q ss_pred ccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCC
Q 045493 99 NELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRS 178 (1048)
Q Consensus 99 ~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~ 178 (1048)
++|+|++|+++ .+|.+|++|++|+.|+|++|+|+ .+|..+++|++|+.|+|++|.++ .+|..
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~----------------~lp~~~~~l~~L~~L~L~~N~l~-~lp~~ 311 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT----------------SLPAELGSCFQLKYFYFFDNMVT-TLPWE 311 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS----------------SCCSSGGGGTTCSEEECCSSCCC-CCCSS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC----------------ccChhhcCCCCCCEEECCCCCCC-ccChh
Confidence 99999999999 78889999999999999999886 45667788888888888888887 55777
Q ss_pred CCCCCCcceeeccccCccccCCcccccccc-cceeccccccccccCCccCcCCCCCCeEeccCC
Q 045493 179 LGGLKNLTFVYLNNNRIVGSIPSEIGNLRS-LSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDN 241 (1048)
Q Consensus 179 ~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 241 (1048)
|..|++|++|+|++|.+++.+|..+..+.. +..|+|++|.+++.+|. .|+.|+++.|
T Consensus 312 ~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 312 FGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTD 369 (727)
T ss_dssp TTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C---------
T ss_pred hhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecc
Confidence 888888888888888888888877766543 33478888888876664 3456666666
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.66 E-value=6.5e-16 Score=175.32 Aligned_cols=240 Identities=11% Similarity=0.120 Sum_probs=143.1
Q ss_pred ccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecC
Q 045493 426 LTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGG 505 (1048)
Q Consensus 426 L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~ 505 (1048)
|+.+.+..+ ++.+...+|.++ +|+.+.+.. .++.+...+|..+++|+.+++++|+++.....+|. +.+|+.+.+..
T Consensus 137 L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~ 212 (401)
T 4fdw_A 137 IAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPV 212 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCT
T ss_pred ccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCC
Confidence 444444333 333444445443 455555553 45555555555555555555555555544444444 35555555553
Q ss_pred cccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccc----
Q 045493 506 NEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLS---- 581 (1048)
Q Consensus 506 N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---- 581 (1048)
+ ++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+. |.++.....+|.++++|+.+++.+|.+.
T Consensus 213 ~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~ 288 (401)
T 4fdw_A 213 T-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPE 288 (401)
T ss_dssp T-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTT
T ss_pred c-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcc
Confidence 3 44445555556666666666554 34344455555 556666663 3344344555666666666666655544
Q ss_pred -ccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccc
Q 045493 582 -KLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCF 660 (1048)
Q Consensus 582 -~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 660 (1048)
.+.+.+|.++++|+.++|. |.++.+...+|.++.+|+.++|..| ++......|.++ +|+.+++++|.+....+..|
T Consensus 289 ~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F 365 (401)
T 4fdw_A 289 AMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVW 365 (401)
T ss_dssp CEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSC
T ss_pred cEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccc
Confidence 4556677777777777777 4477777777777777777777554 665667777777 78888888887776666677
Q ss_pred cccC-CccEEEecccee
Q 045493 661 RRMH-GLSSIDVSYNEL 676 (1048)
Q Consensus 661 ~~l~-~L~~l~ls~N~l 676 (1048)
..++ .++.|++..|.+
T Consensus 366 ~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 366 YGFPDDITVIRVPAESV 382 (401)
T ss_dssp CCSCTTCCEEEECGGGH
T ss_pred cCCCCCccEEEeCHHHH
Confidence 7664 567777776643
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=1.5e-15 Score=172.26 Aligned_cols=266 Identities=14% Similarity=0.159 Sum_probs=204.9
Q ss_pred cCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEE
Q 045493 351 LKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFS 430 (1048)
Q Consensus 351 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~ 430 (1048)
+..++.+.+.+ .++.+...+|.++ +|+.+.+.++ +..+ ...+|.. .+|+.+.
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I------------------------~~~aF~~-~~L~~i~ 163 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSI------------------------GDMAFFN-STVQEIV 163 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEE------------------------CTTTTTT-CCCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEE------------------------CHHhcCC-CCceEEE
Confidence 46677776654 3444555667664 5777776554 3322 2233333 2466666
Q ss_pred eecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCc
Q 045493 431 VRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISG 510 (1048)
Q Consensus 431 l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~ 510 (1048)
+.+ .+..+.+.+|.+|++|+.+++.+|+++.++..+|. ..+|+.+.|.++ ++.+...+|.++++|+.+.+.+| ++.
T Consensus 164 lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~ 239 (401)
T 4fdw_A 164 FPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VST 239 (401)
T ss_dssp CCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCE
T ss_pred eCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccC
Confidence 664 56666677888888888888888888888888887 478888888744 77777888888889999998875 565
Q ss_pred ccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCcccc-----CCCccccccccccceeecccCccccccc
Q 045493 511 TIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLS-----GDIPLELGLLAELGYLDLSANRLSKLIP 585 (1048)
Q Consensus 511 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 585 (1048)
....+|.+ .+|+.+.+. |.++.....+|.++++|+.+++.+|.+. ...+.+|.++++|+.++|. +.++.+..
T Consensus 240 I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~ 316 (401)
T 4fdw_A 240 IGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQ 316 (401)
T ss_dssp ECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECT
T ss_pred cccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhh
Confidence 66777877 789999994 5566677888999999999999888765 3556789999999999999 56888888
Q ss_pred ccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCcc-ccCeEECCCCccc
Q 045493 586 KNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLE-SLEYMNLLQNKLS 653 (1048)
Q Consensus 586 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 653 (1048)
.+|.++.+|+.++|.+| ++.+...+|.++ +|+.+++++|.+.......|..++ +++.|++..+.+.
T Consensus 317 ~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 317 GLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 99999999999999665 888888999999 999999999999877778888874 7899999888875
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=6.4e-16 Score=156.91 Aligned_cols=126 Identities=26% Similarity=0.354 Sum_probs=105.2
Q ss_pred EEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCC
Q 045493 3 SINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVN 82 (1048)
Q Consensus 3 ~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n 82 (1048)
.++++++++ +++|...++++++|+|++|+|+ .+|..|+.+++|++|+|++|+|+++.+.+|.++++|++|+|++|
T Consensus 14 ~l~~~~~~l----~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGL----KVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCC----SSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCC----CcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 356666554 4666667788999999999888 66688888889999999999998887788889999999999999
Q ss_pred cCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEeeccccc
Q 045493 83 QLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLS 133 (1048)
Q Consensus 83 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~ 133 (1048)
+|+++.|..|.++++|++|+|++|+++...+..|..+++|+.|++++|++.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 998888888888889999999999988777777888888999999888875
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=4.4e-16 Score=154.70 Aligned_cols=132 Identities=24% Similarity=0.276 Sum_probs=67.2
Q ss_pred CCccEEEecCcccC-cccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceee
Q 045493 496 PQLATLNMGGNEIS-GTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLD 574 (1048)
Q Consensus 496 ~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 574 (1048)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 34444555555555555555555543 4455555555555555555544454455555555555
Q ss_pred cccCccccccc-ccccccccccccccccccccchhh---hhhccccccCeEECCCCccc
Q 045493 575 LSANRLSKLIP-KNLGELRKLHHLNLSNNQFSQEIS---IQIGKLVQLSKLDLSHNSLG 629 (1048)
Q Consensus 575 Ls~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~ 629 (1048)
|++|+|+++.. ..+..+++|++|++++|++++..+ ..+..+++|+.||+++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 55555554421 344444444444444444444333 34444444555555554443
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=4.4e-16 Score=154.71 Aligned_cols=132 Identities=25% Similarity=0.238 Sum_probs=74.3
Q ss_pred CCCcEEEcccCccc-CCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccc
Q 045493 520 TQLHKLDFSSNRLV-GQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLN 598 (1048)
Q Consensus 520 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 598 (1048)
++|+.|++++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|++++|++++..|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 45566666667777777777776643 5566666666666666666665455555555555555
Q ss_pred cccccccchhh-hhhccccccCeEECCCCcccCcCC---cCcCCccccCeEECCCCccc
Q 045493 599 LSNNQFSQEIS-IQIGKLVQLSKLDLSHNSLGGNIP---SEICNLESLEYMNLLQNKLS 653 (1048)
Q Consensus 599 Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~ 653 (1048)
|++|+|+++.. ..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 55555554322 344444445555555554443322 23444444444444444443
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=8.4e-16 Score=156.04 Aligned_cols=112 Identities=28% Similarity=0.343 Sum_probs=68.2
Q ss_pred ccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECC
Q 045493 569 ELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLL 648 (1048)
Q Consensus 569 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 648 (1048)
+|++|+|++|+|+.+ |..|..+++|+.|+|++|+|+++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~~i-p~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFTLV-PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCCSC-CGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCchh-HHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 444455555554433 3445555555555555555555555555566666666666666666666666666777777777
Q ss_pred CCcccCCccccccccCCccEEEeccceecCCCC
Q 045493 649 QNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIP 681 (1048)
Q Consensus 649 ~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p 681 (1048)
+|+|+...+..|..++.|+.|++++|+|.+.+.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 777766666666677777777777777766543
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.7e-15 Score=151.85 Aligned_cols=130 Identities=26% Similarity=0.307 Sum_probs=110.2
Q ss_pred EEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCC
Q 045493 3 SINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVN 82 (1048)
Q Consensus 3 ~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n 82 (1048)
.+++++++ ++++|...++++++|++++|++++..+..|+.+++|++|+|++|+++++.+..|+.+++|++|+|++|
T Consensus 11 ~l~~~~~~----l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 11 EIRCNSKG----LTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EEECCSSC----CSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEecCCC----CccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 46666665 45677777889999999999999777788899999999999999999777777899999999999999
Q ss_pred cCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEeecccccCcc
Q 045493 83 QLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQI 136 (1048)
Q Consensus 83 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~ 136 (1048)
+++++.+..|..+++|++|++++|++++..+..|..+++|++|++++|++.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 999887778889999999999999999777777888999999999999887543
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=9.9e-16 Score=153.57 Aligned_cols=133 Identities=26% Similarity=0.300 Sum_probs=88.2
Q ss_pred CEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCC
Q 045493 547 TSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHN 626 (1048)
Q Consensus 547 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 626 (1048)
+.+++++|+++ .+|..+ .++|++|++++|+++++.+..|..+++|++|++++|+|+++.+..+..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 44555555555 233222 245566666666666555555566666666666666666655556667777777777777
Q ss_pred cccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCC
Q 045493 627 SLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPH 682 (1048)
Q Consensus 627 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~ 682 (1048)
+|++..+..+..+++|++|++++|+|++..+..+..++.|++|++++|+++|.+|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 77766666677777888888888888766666677778888888888888777664
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=8.5e-16 Score=149.23 Aligned_cols=127 Identities=24% Similarity=0.280 Sum_probs=60.1
Q ss_pred CCccEEEecCcccC-cccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceee
Q 045493 496 PQLATLNMGGNEIS-GTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLD 574 (1048)
Q Consensus 496 ~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 574 (1048)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34445555555544 34444445555555555555555433 4444555555555555555543444444455555555
Q ss_pred cccCcccccc-cccccccccccccccccccccchhh---hhhccccccCeEECC
Q 045493 575 LSANRLSKLI-PKNLGELRKLHHLNLSNNQFSQEIS---IQIGKLVQLSKLDLS 624 (1048)
Q Consensus 575 Ls~N~l~~~~-~~~l~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~Ls 624 (1048)
+++|+++++. +..+..+++|++|++++|++++..+ ..+..+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 5555554431 2344444444444444444444333 334444444444443
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=1.1e-15 Score=148.55 Aligned_cols=128 Identities=24% Similarity=0.236 Sum_probs=75.5
Q ss_pred cCCCcEEEcccCccc-CCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccccccccc
Q 045493 519 MTQLHKLDFSSNRLV-GQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHL 597 (1048)
Q Consensus 519 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 597 (1048)
.++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|++++..|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356777777777776 55666667777777777777777644 556666666666666666666555555555566666
Q ss_pred ccccccccchh-hhhhccccccCeEECCCCcccCcCC---cCcCCccccCeEECC
Q 045493 598 NLSNNQFSQEI-SIQIGKLVQLSKLDLSHNSLGGNIP---SEICNLESLEYMNLL 648 (1048)
Q Consensus 598 ~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~ 648 (1048)
++++|+|++.. +..++.+++|++|++++|++++..+ ..+..+++|++|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 66666555532 2444555555555555555553333 234444445544443
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.60 E-value=1.7e-14 Score=164.66 Aligned_cols=238 Identities=13% Similarity=0.097 Sum_probs=157.8
Q ss_pred cccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCC
Q 045493 418 QNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQ 497 (1048)
Q Consensus 418 ~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~ 497 (1048)
..|..+.+|+.+.+.++ +..+....|.++.+|+.+.+..+ ++.+...+|.....|+.+.+..+... +...+.....
T Consensus 156 ~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~ 231 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTG 231 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCC
T ss_pred hhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCC
Confidence 45566667777777544 33355567777888888877765 66677777777777887777665432 2233344567
Q ss_pred ccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeeccc
Q 045493 498 LATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSA 577 (1048)
Q Consensus 498 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 577 (1048)
|+.+.+..+ ++.....+|..+..|+.+.+..+... .....|..+..++.+....+.+. ...|..+.+|+.+.+..
T Consensus 232 l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 232 VKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLD 306 (394)
T ss_dssp CCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECT
T ss_pred CceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccccccccccc
Confidence 777777643 33355566777788888888776544 55667777777877777666543 24567777777777765
Q ss_pred CcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCcc
Q 045493 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIP 657 (1048)
Q Consensus 578 N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 657 (1048)
+ ++.+...+|.++.+|+.+++.++ ++.++..+|.++.+|+.+++..| ++.....+|.++++|+.+++..+ ++ .+.
T Consensus 307 ~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~ 381 (394)
T 4fs7_A 307 S-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYR 381 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGG
T ss_pred c-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-Ehh
Confidence 4 66666677777777777777644 66677777777777777777766 66566677777777777777544 33 234
Q ss_pred ccccccCCccEE
Q 045493 658 SCFRRMHGLSSI 669 (1048)
Q Consensus 658 ~~~~~l~~L~~l 669 (1048)
.+|...++|+++
T Consensus 382 ~~F~~c~~L~~I 393 (394)
T 4fs7_A 382 YDFEDTTKFKWI 393 (394)
T ss_dssp GGBCTTCEEEEE
T ss_pred heecCCCCCcEE
Confidence 456666666553
No 390
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.60 E-value=1.3e-14 Score=165.58 Aligned_cols=335 Identities=11% Similarity=0.055 Sum_probs=189.2
Q ss_pred cccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcc
Q 045493 171 FSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPK 250 (1048)
Q Consensus 171 ~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 250 (1048)
++.+...+|.++++|+.+.+..+ ++.+-..+|.++++|+.++|..+ +.......|.++.+|+.+.+..+ ++......
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 44555667777777877777643 55566677777777777777654 44344556777777777666544 33234445
Q ss_pred cccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeeccccccccccccc
Q 045493 251 LGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFIPPSLGNLSNI 330 (1048)
Q Consensus 251 ~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 330 (1048)
|.+...++......... +...+|.++++|+.+.+.+ .+.......|.++.+|+.+.+..+ ++.+....|.++..|
T Consensus 136 F~~~~~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~--~~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVTV--IGDEAFATCESLEYVSLPD--SMETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp TTTCCCSEEECCTTCCE--ECTTTTTTCTTCCEEECCT--TCCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred eecccccccccCccccc--cchhhhcccCCCcEEecCC--ccceeccccccCCCCceEEEcCCC-ceEeCchhhcccccc
Confidence 55554333332222211 2233444444444444431 112122333444444444444433 222333344444444
Q ss_pred ceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcccceeecccc
Q 045493 331 RGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKKLNKYLLFEN 410 (1048)
Q Consensus 331 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N 410 (1048)
+.+.+..+... +.+..... ++|+.+.+..+. .......+..+..++.+.+..+
T Consensus 211 ~~i~~~~~~~~--i~~~~~~~------------------------~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~ 263 (394)
T 4fs7_A 211 ENMEFPNSLYY--LGDFALSK------------------------TGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNN 263 (394)
T ss_dssp CBCCCCTTCCE--ECTTTTTT------------------------CCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCT
T ss_pred ceeecCCCceE--eehhhccc------------------------CCCceEEECCCc-eecccccccccccceeEEcCCC
Confidence 44444333221 11222223 344444443221 1122233444444444444433
Q ss_pred ccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccc
Q 045493 411 QFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISS 490 (1048)
Q Consensus 411 ~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~ 490 (1048)
... .....+..+..++.+....+.+ ....|..+.+|+.+.+..+ ++.+...+|..+.+|+.+++.++ ++.+...
T Consensus 264 ~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~ 337 (394)
T 4fs7_A 264 KLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKR 337 (394)
T ss_dssp TCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred cce-eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHH
Confidence 221 3334455556666666655433 2356777888888888654 77778888888888888888644 6667778
Q ss_pred cccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEE
Q 045493 491 NWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSL 549 (1048)
Q Consensus 491 ~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 549 (1048)
+|.+|.+|+.+.+..| ++.....+|.++++|+.+++..+ +. .+..+|.++++|+.+
T Consensus 338 aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 338 SFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred hccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 8888888998888776 66677778888999999988765 33 335678888888765
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=8.9e-17 Score=164.42 Aligned_cols=111 Identities=24% Similarity=0.284 Sum_probs=58.5
Q ss_pred cccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccc
Q 045493 515 EIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKL 594 (1048)
Q Consensus 515 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 594 (1048)
.+..+++|++|+|++|++++ +| .+..+++|++|++++|.++ .+|..+..+++|++|++++|+|+++ | .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l-~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL-S-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCH-H-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcC-C-ccccCCCC
Confidence 55555556666666665554 33 5555555666666666555 3444445555555555555555553 2 34555555
Q ss_pred cccccccccccchhh-hhhccccccCeEECCCCcccC
Q 045493 595 HHLNLSNNQFSQEIS-IQIGKLVQLSKLDLSHNSLGG 630 (1048)
Q Consensus 595 ~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~ 630 (1048)
++|++++|+|++... ..+..+++|++|++++|.+++
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc
Confidence 555555555554332 344445555555555555443
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=9.6e-17 Score=164.20 Aligned_cols=157 Identities=24% Similarity=0.269 Sum_probs=131.2
Q ss_pred ccccCCCcEEEcccCcccCCcCc------cccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccc
Q 045493 516 IGNMTQLHKLDFSSNRLVGQIPK------QLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLG 589 (1048)
Q Consensus 516 ~~~l~~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 589 (1048)
+.....++.++++.|.+.+..|. .+..+++|++|+|++|.+++ +| .+..+++|++|++++|+|+.+ |..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l-~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKI-ENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSC-SSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccc-cchhh
Confidence 34455666667777776666555 89999999999999999996 66 899999999999999999975 67788
Q ss_pred ccccccccccccccccchhhhhhccccccCeEECCCCcccCcCC-cCcCCccccCeEECCCCcccCCcccc---------
Q 045493 590 ELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIP-SEICNLESLEYMNLLQNKLSGPIPSC--------- 659 (1048)
Q Consensus 590 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~--------- 659 (1048)
.+++|++|++++|+|+++. .+..+++|++|++++|++++..+ ..+..+++|++|++++|++++.+|..
T Consensus 91 ~~~~L~~L~L~~N~l~~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIASLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCCHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCcCC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 8899999999999999864 68899999999999999985433 47889999999999999998776653
Q ss_pred -ccccCCccEEEeccceecCC
Q 045493 660 -FRRMHGLSSIDVSYNELQGS 679 (1048)
Q Consensus 660 -~~~l~~L~~l~ls~N~l~~~ 679 (1048)
+..++.|+.|| +|+++..
T Consensus 169 ~~~~l~~L~~Ld--~~~i~~~ 187 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVDVD 187 (198)
T ss_dssp HHHHCSSCSEEC--CGGGTTT
T ss_pred HHHhCCCcEEEC--CcccCHH
Confidence 78899999987 7777543
No 393
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.55 E-value=1.9e-15 Score=166.66 Aligned_cols=146 Identities=8% Similarity=0.022 Sum_probs=97.1
Q ss_pred hhcccCCcceeeecccccccEEEEEEcCCCceeeEEeccCCCC------ccc----c---hhhHHHHHHhhcccCceeeE
Q 045493 772 LSASTFEGKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTG------EIG----I---NQKGFVSEITEIRHRNIVKF 838 (1048)
Q Consensus 772 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~------~~~----~---~~~~~~~~l~~l~h~niv~~ 838 (1048)
......+.-...||+|+||.||+|...+|+.||||.++..... ... . ......+......|+|++++
T Consensus 91 ~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL 170 (397)
T 4gyi_A 91 AARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL 170 (397)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 3344445556679999999999999999999999987542111 000 0 00111111112234444444
Q ss_pred eeEeee------CCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEE
Q 045493 839 YGFCSH------TQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLL 912 (1048)
Q Consensus 839 ~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll 912 (1048)
+..... ....++||||++|+++.++.. ......++.|++.|+.|||+. |||||||||.|||+
T Consensus 171 ~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~---------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl 238 (397)
T 4gyi_A 171 YEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSS---------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILI 238 (397)
T ss_dssp HHTTCSCCCEEEEETTEEEEECCSCEEGGGCCC---------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred HhcCCCCCeeeeccCceEEEEecCCccHhhhcc---------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEE
Confidence 322110 112379999999988865431 123457889999999999998 99999999999999
Q ss_pred CCCC----------ceEEecccccccc
Q 045493 913 DLEY----------KAHVSDFGTAKFL 929 (1048)
Q Consensus 913 ~~~~----------~~kl~DfG~a~~~ 929 (1048)
+++| .+.|+||+-+...
T Consensus 239 ~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 239 REEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred eCCCCcccccccccceEEEEeCCcccC
Confidence 8876 3899999988654
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=3.9e-15 Score=148.95 Aligned_cols=107 Identities=24% Similarity=0.341 Sum_probs=60.1
Q ss_pred ccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCc--CcCCccccCeEE
Q 045493 569 ELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPS--EICNLESLEYMN 646 (1048)
Q Consensus 569 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~ 646 (1048)
+|++|++++|+|+++ ..|..+++|++|+|++|+|+++.+..+..+++|++|+|++|+|+ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 444444444444443 34444555555555555555444444455566666666666664 3333 556666677777
Q ss_pred CCCCcccCCccc---cccccCCccEEEeccceecC
Q 045493 647 LLQNKLSGPIPS---CFRRMHGLSSIDVSYNELQG 678 (1048)
Q Consensus 647 L~~N~l~~~~~~---~~~~l~~L~~l~ls~N~l~~ 678 (1048)
+++|+++...+. .+..++.|++||+++|....
T Consensus 120 l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 120 ILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred ecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 777776633222 36677777777777776543
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=9.6e-15 Score=146.10 Aligned_cols=85 Identities=22% Similarity=0.227 Sum_probs=33.8
Q ss_pred ccccceeecccCcccccccccccccccccccccccccccchhh-hhhccccccCeEECCCCcccCcCCcC----cCCccc
Q 045493 567 LAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEIS-IQIGKLVQLSKLDLSHNSLGGNIPSE----ICNLES 641 (1048)
Q Consensus 567 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~ 641 (1048)
+++|++|+|++|+|+++++..|..+++|++|+|++|+|+.... ..+..+++|+.|++++|.++ .+|.. +..+++
T Consensus 63 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~ 141 (176)
T 1a9n_A 63 LRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQ 141 (176)
T ss_dssp CSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTT
T ss_pred CCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCc
Confidence 3333333333333333322333333444444444444433221 13334444444444444444 22221 444444
Q ss_pred cCeEECCCCcc
Q 045493 642 LEYMNLLQNKL 652 (1048)
Q Consensus 642 L~~L~L~~N~l 652 (1048)
|++|++++|.+
T Consensus 142 L~~Ld~~~n~~ 152 (176)
T 1a9n_A 142 VRVLDFQKVKL 152 (176)
T ss_dssp CSEETTEECCH
T ss_pred cceeCCCcCCH
Confidence 44454444444
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=9.7e-14 Score=137.62 Aligned_cols=106 Identities=30% Similarity=0.337 Sum_probs=89.3
Q ss_pred ccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccccc
Q 045493 26 LAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSY 105 (1048)
Q Consensus 26 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~ 105 (1048)
.+++|+++|+++ .+|..+. ++|++|+|++|+|+++.|..|+.+++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 468889999888 4565553 7888999999999888788888999999999999999988777888889999999999
Q ss_pred eecccccCcCcCCcCCCceEEeecccccC
Q 045493 106 NRLNGSIPASLGNLSNLVQLSLSNNSLSG 134 (1048)
Q Consensus 106 n~~~~~~~~~~~~L~~L~~L~l~~n~l~~ 134 (1048)
|++++..+..|..+++|+.|+|++|++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 99987777788889999999999998763
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.1e-13 Score=135.69 Aligned_cols=105 Identities=25% Similarity=0.342 Sum_probs=88.0
Q ss_pred ccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccccc
Q 045493 26 LAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSY 105 (1048)
Q Consensus 26 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~ 105 (1048)
-+.+++++|+++ .+|..+. ++|++|+|++|+|+++.|..|+.+++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 368888888887 5565554 7888999999999888788888999999999999999887777788888999999999
Q ss_pred eecccccCcCcCCcCCCceEEeeccccc
Q 045493 106 NRLNGSIPASLGNLSNLVQLSLSNNSLS 133 (1048)
Q Consensus 106 n~~~~~~~~~~~~L~~L~~L~l~~n~l~ 133 (1048)
|++++..+..|..+++|+.|+|++|++.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 9988766667888999999999998876
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=4.1e-13 Score=133.11 Aligned_cols=106 Identities=25% Similarity=0.301 Sum_probs=96.5
Q ss_pred EEEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCC
Q 045493 2 VSINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSV 81 (1048)
Q Consensus 2 ~~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~ 81 (1048)
+.++++++++ +++|...++++++|+|++|+|++..|..|+.+++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 12 ~~l~~s~n~l----~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSL----ASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCC----SSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCc----CccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3577887765 557777789999999999999999999999999999999999999988888899999999999999
Q ss_pred CcCCCCCccccccccccccccccceecccc
Q 045493 82 NQLNGLIPEELGELTSLNELALSYNRLNGS 111 (1048)
Q Consensus 82 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 111 (1048)
|+|+++.+..|..+++|++|+|++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999998888899999999999999999843
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=3.6e-13 Score=133.93 Aligned_cols=112 Identities=24% Similarity=0.242 Sum_probs=97.9
Q ss_pred EEEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCC
Q 045493 2 VSINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSV 81 (1048)
Q Consensus 2 ~~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~ 81 (1048)
+.++++++++ +++|...++++++|+|++|+|++..|..|+.+++|++|+|++|+|+++.+..|+.+++|++|+|++
T Consensus 15 ~~l~~~~n~l----~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRL----ASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCC----SSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCC----CccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 3577777776 567777789999999999999999999999999999999999999987777789999999999999
Q ss_pred CcCCCCCccccccccccccccccceecccccCcCcCC
Q 045493 82 NQLNGLIPEELGELTSLNELALSYNRLNGSIPASLGN 118 (1048)
Q Consensus 82 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 118 (1048)
|+|+++.+..|..+++|++|+|++|.+.. .+..+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c-~~~~~~~ 126 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC-ECRDIMY 126 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT-TBGGGHH
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc-ccccHHH
Confidence 99998877789999999999999999983 4433433
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.41 E-value=7e-15 Score=165.14 Aligned_cols=171 Identities=20% Similarity=0.207 Sum_probs=80.1
Q ss_pred CCCCeeeCcCCcccCcccccccC-----CCCccEEEecCcccCcccCcccc-ccCCCcEEEcccCcccCCcCcccc----
Q 045493 472 PDLELLDLSNNNFFGEISSNWIK-----CPQLATLNMGGNEISGTIPSEIG-NMTQLHKLDFSSNRLVGQIPKQLG---- 541 (1048)
Q Consensus 472 ~~L~~L~Ls~n~l~~~~~~~~~~-----~~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~---- 541 (1048)
+.|+.|+|++|.++......+.. .++|++|+|++|.|++.....+. .+++|+.|+|++|+|++.....+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45677777777766543332222 24666666666666543333222 244555666666555433222221
Q ss_pred -CCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchh----hhhhcccc
Q 045493 542 -KLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEI----SIQIGKLV 616 (1048)
Q Consensus 542 -~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~ 616 (1048)
..++|++|+|++|.|+...... .+..+..+++|++|+|++|+|++.+ ...+...+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~--------------------l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~ 211 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAV--------------------LMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNR 211 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHH--------------------HHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCS
T ss_pred hcCCccceeeCCCCCCChHHHHH--------------------HHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC
Confidence 2344455555555444211111 1122233444555555555554433 22233445
Q ss_pred ccCeEECCCCcccCcCC----cCcCCccccCeEECCCCcccCCccccccc
Q 045493 617 QLSKLDLSHNSLGGNIP----SEICNLESLEYMNLLQNKLSGPIPSCFRR 662 (1048)
Q Consensus 617 ~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 662 (1048)
+|++|||++|.|++... ..+...++|++|+|++|+|+......+..
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 55555555555553222 22223455666666666665544444443
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.41 E-value=7.1e-15 Score=165.09 Aligned_cols=136 Identities=19% Similarity=0.168 Sum_probs=95.3
Q ss_pred ccccceeEecCCccccCcccccCC-----CCCCCeeeCcCCcccCccccccc-CCCCccEEEecCcccCcccCcccc---
Q 045493 447 CTSLYSLRLERNQLTGNISEVFGI-----YPDLELLDLSNNNFFGEISSNWI-KCPQLATLNMGGNEISGTIPSEIG--- 517 (1048)
Q Consensus 447 l~~L~~L~L~~n~l~~~~~~~~~~-----~~~L~~L~Ls~n~l~~~~~~~~~-~~~~L~~L~L~~N~i~~~~~~~~~--- 517 (1048)
+++|++|+|++|.++......+.. .++|+.|+|++|.++......+. .+++|++|+|++|.|++.....++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 467999999999998665544432 26999999999999765444443 467899999999999866555553
Q ss_pred --ccCCCcEEEcccCcccCC----cCccccCCCccCEEeecCccccCCC----ccccccccccceeecccCcccc
Q 045493 518 --NMTQLHKLDFSSNRLVGQ----IPKQLGKLTSLTSLTLNGNQLSGDI----PLELGLLAELGYLDLSANRLSK 582 (1048)
Q Consensus 518 --~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~ 582 (1048)
..++|++|+|++|.|++. ++..+..+++|++|+|++|.|++.. +..+...++|++|+|++|.|+.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 468899999999999753 3334466777888888888876322 2333444445555555555443
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.38 E-value=9.5e-12 Score=141.79 Aligned_cols=134 Identities=7% Similarity=0.124 Sum_probs=66.7
Q ss_pred cCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccc
Q 045493 512 IPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGEL 591 (1048)
Q Consensus 512 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 591 (1048)
...+|.++..|+.+.+.++... ....+|.++++|+.+.+. +.++.....+|.++.+|+.++|..+ ++.+...+|.++
T Consensus 257 ~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 257 ETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp CTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred ccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCC
Confidence 3344555555555555444332 444455555555555554 2333333445555556666665533 555555566666
Q ss_pred ccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcc
Q 045493 592 RKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKL 652 (1048)
Q Consensus 592 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 652 (1048)
.+|+.+.+..+ ++.++..+|.++.+|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 66666666433 555566666666666666666665431 3445556666666655544
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.38 E-value=7.4e-12 Score=142.70 Aligned_cols=308 Identities=12% Similarity=0.132 Sum_probs=174.4
Q ss_pred CCeEeccCCccccCcChhhhccCCCcEEEeeccc---ccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEE
Q 045493 354 LSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENE---LSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFS 430 (1048)
Q Consensus 354 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~---l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~ 430 (1048)
|+.+.+-.+ ++.+...+|.++++|+.+.+.+|. ++.+-...|..+..|+.+.+..+ ++......+..+.+|+.+.
T Consensus 66 L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 444444322 333334455555555555555442 22222344555555555544432 3333444566667777777
Q ss_pred eecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCc
Q 045493 431 VRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISG 510 (1048)
Q Consensus 431 l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~ 510 (1048)
+..+ +..+....|..+.+|+.+.+..+ ++.+...+|.. ..|+.+.+..+ +......+|..+..+.......+....
T Consensus 144 lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~-~~~i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAK-VTRIGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTT-CCEECTTTTTTCTTCCEEEECCSSSCB
T ss_pred ccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCc-ccccccchhhhccccceeccccccccc
Confidence 7543 34455567777778887777654 56666667754 46777777654 333556677777777777766555442
Q ss_pred ccCcccc-------------ccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeeccc
Q 045493 511 TIPSEIG-------------NMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSA 577 (1048)
Q Consensus 511 ~~~~~~~-------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 577 (1048)
.....+. ....+..+.+.. .++.....+|.++.+|+.+.+..+..+ ....+|.++.+|+.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~- 296 (394)
T 4gt6_A 220 IDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS- 296 (394)
T ss_dssp SSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-
T ss_pred ccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-
Confidence 1111111 112233333332 233344566777777777777665443 455667777777777775
Q ss_pred CcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCcc
Q 045493 578 NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIP 657 (1048)
Q Consensus 578 N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 657 (1048)
+.++.+...+|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..+ ++.....+|.++++|+.+++.+|....
T Consensus 297 ~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--- 371 (394)
T 4gt6_A 297 SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW--- 371 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---
T ss_pred CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---
Confidence 4566666677777777777777654 66666777777777777777544 555556677777777777777765531
Q ss_pred ccccccCCccEEEeccce
Q 045493 658 SCFRRMHGLSSIDVSYNE 675 (1048)
Q Consensus 658 ~~~~~l~~L~~l~ls~N~ 675 (1048)
..+.....|+.+.+..|.
T Consensus 372 ~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 372 NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp HTCBCCCCC---------
T ss_pred hhhhccCCCCEEEeCCCC
Confidence 344555666666665554
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.21 E-value=1.3e-11 Score=138.15 Aligned_cols=104 Identities=22% Similarity=0.237 Sum_probs=90.3
Q ss_pred cEEeCCCC-cccccccccccCCCCCCEeeCCC-CccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccccccccc
Q 045493 27 AYLDLSVN-QLFGTIPTQISHLSKLKHLDFST-NQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALS 104 (1048)
Q Consensus 27 ~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~ 104 (1048)
..++++++ +|+ .+|. |+.+++|++|+|++ |+|+++.|.+|+++++|++|+|++|+|+++.|..|.++++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688888 888 4666 99999999999996 99998877889999999999999999999888889999999999999
Q ss_pred ceecccccCcCcCCcCCCceEEeeccccc
Q 045493 105 YNRLNGSIPASLGNLSNLVQLSLSNNSLS 133 (1048)
Q Consensus 105 ~n~~~~~~~~~~~~L~~L~~L~l~~n~l~ 133 (1048)
+|+++++.+..|..++ |+.|+|++|++.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 9999977777777776 999999999875
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.19 E-value=1.7e-11 Score=137.29 Aligned_cols=104 Identities=22% Similarity=0.202 Sum_probs=64.3
Q ss_pred EEeecCc-cccCCCccccccccccceeeccc-CcccccccccccccccccccccccccccchhhhhhccccccCeEECCC
Q 045493 548 SLTLNGN-QLSGDIPLELGLLAELGYLDLSA-NRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSH 625 (1048)
Q Consensus 548 ~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 625 (1048)
.++++++ +++ .+|. +..+++|++|+|++ |+|+++.+..|.++++|+.|+|++|+|+++.+..|..+++|+.|||++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3455555 565 3455 66666666666664 666666556666666666666666666666666666666666666666
Q ss_pred CcccCcCCcCcCCccccCeEECCCCcccC
Q 045493 626 NSLGGNIPSEICNLESLEYMNLLQNKLSG 654 (1048)
Q Consensus 626 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 654 (1048)
|+|++..+..|..++ |+.|+|.+|+|..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 666655555555444 6666666666653
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.14 E-value=8.8e-10 Score=124.87 Aligned_cols=148 Identities=11% Similarity=0.078 Sum_probs=86.0
Q ss_pred CcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccC
Q 045493 463 NISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGK 542 (1048)
Q Consensus 463 ~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 542 (1048)
+....|....+|+.+.+..+ +......+|..+..|+.+.+..+ ++.....+|.++.+|+.+.+..+ +......+|.+
T Consensus 208 i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~ 284 (379)
T 4h09_A 208 VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSG 284 (379)
T ss_dssp ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTT
T ss_pred Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccc
Confidence 33444455555555555433 33344455566666666666554 44444556666666666666543 33344556666
Q ss_pred CCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccc
Q 045493 543 LTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKL 615 (1048)
Q Consensus 543 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 615 (1048)
+++|+.+.+.++.++.....+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++.++..+|.+.
T Consensus 285 c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 285 CSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred ccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 666666666666665444556666666666666543 55555666777777777766544 556666666554
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.10 E-value=2e-09 Score=121.97 Aligned_cols=303 Identities=11% Similarity=0.067 Sum_probs=141.9
Q ss_pred cccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcEEEeecccccCCchhhhhhhcc
Q 045493 322 PSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKFFALRENELSGSIPQEIENMKK 401 (1048)
Q Consensus 322 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 401 (1048)
+++....+|+.+.+... ++.+...+|.++.+|+.++|..+ ++.+...+|.++ +|+.+.+-.+ +.......|.. .+
T Consensus 40 ~~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~ 114 (379)
T 4h09_A 40 PWYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TD 114 (379)
T ss_dssp TTGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CC
T ss_pred cccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CC
Confidence 34555566666666543 34445556666677777766543 443445556655 4555554332 22111222222 23
Q ss_pred cceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcC
Q 045493 402 LNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSN 481 (1048)
Q Consensus 402 L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~ 481 (1048)
| +.+.+..+ ++......|.++ +++.+.+.. .++.+...+|.....++.+.+..
T Consensus 115 L------------------------~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~ 167 (379)
T 4h09_A 115 L------------------------DDFEFPGA-TTEIGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSS 167 (379)
T ss_dssp C------------------------SEEECCTT-CCEECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECT
T ss_pred c------------------------ccccCCCc-cccccccccccc-eeeeeeccc-eeeccccchhccccccccccccc
Confidence 4 44444332 121222333332 333333322 23334444444444444444433
Q ss_pred CcccC------------cccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEE
Q 045493 482 NNFFG------------EISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSL 549 (1048)
Q Consensus 482 n~l~~------------~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 549 (1048)
+.... .....+..+..+..+.+..+.- ......+.....|+.+.+..+ +......+|.++.+|+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i 245 (379)
T 4h09_A 168 NNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEI 245 (379)
T ss_dssp TCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEE
T ss_pred ccceeecccceecccccceecccccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEE
Confidence 22211 1111222333444444333222 133344455555565555444 222444455555666666
Q ss_pred eecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCccc
Q 045493 550 TLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLG 629 (1048)
Q Consensus 550 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 629 (1048)
.+..+ ++.....+|..+.+|+.+.+.. .++.+...+|.++.+|+.+.+.++.++.+...+|.++.+|+.++|..+ ++
T Consensus 246 ~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~ 322 (379)
T 4h09_A 246 AIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK 322 (379)
T ss_dssp EECTT-CCEECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC
T ss_pred EcCCC-ccEeCccccceeehhccccccc-cceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc
Confidence 66544 3333344555555566555543 244444455555666666666555555555556666666666666543 44
Q ss_pred CcCCcCcCCccccCeEECCCCcccCCccccccc
Q 045493 630 GNIPSEICNLESLEYMNLLQNKLSGPIPSCFRR 662 (1048)
Q Consensus 630 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 662 (1048)
.....+|.++.+|+.+.+..+ ++.+...+|..
T Consensus 323 ~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~ 354 (379)
T 4h09_A 323 TIQVYAFKNCKALSTISYPKS-ITLIESGAFEG 354 (379)
T ss_dssp EECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred EEHHHHhhCCCCCCEEEECCc-cCEEchhHhhC
Confidence 444555666666666655433 44344444433
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.01 E-value=2.7e-10 Score=126.48 Aligned_cols=84 Identities=13% Similarity=0.218 Sum_probs=38.1
Q ss_pred ccccceeecccCccccccccccc---ccccccccccccccccchhhhhh----ccccccCeEECCCCcccCcCCcCcCCc
Q 045493 567 LAELGYLDLSANRLSKLIPKNLG---ELRKLHHLNLSNNQFSQEISIQI----GKLVQLSKLDLSHNSLGGNIPSEICNL 639 (1048)
Q Consensus 567 l~~L~~L~Ls~N~l~~~~~~~l~---~l~~L~~L~Ls~N~l~~~~~~~~----~~l~~L~~L~Ls~N~l~~~~~~~~~~l 639 (1048)
+++|++|+|++|.++...+..+. .+++|++|+|+.|.|++.+...+ ..+++|+.|+|++|.|++.....+...
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 34455555555554432222221 24555555555555555433222 234556666666665554333322220
Q ss_pred cccCeEECCCCc
Q 045493 640 ESLEYMNLLQNK 651 (1048)
Q Consensus 640 ~~L~~L~L~~N~ 651 (1048)
- ...++++.|+
T Consensus 331 l-g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L-PMKIDVSDSQ 341 (362)
T ss_dssp C-CSEEECCSBC
T ss_pred c-CCEEEecCCc
Confidence 0 2445555555
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.00 E-value=1.7e-10 Score=128.17 Aligned_cols=156 Identities=20% Similarity=0.220 Sum_probs=101.9
Q ss_pred ccccccCCCcEEEcccCc-ccCCcCccccCCCccCEEeecCccccCCCccccc--cccccceeeccc--Ccc------cc
Q 045493 514 SEIGNMTQLHKLDFSSNR-LVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELG--LLAELGYLDLSA--NRL------SK 582 (1048)
Q Consensus 514 ~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~--N~l------~~ 582 (1048)
..+..+|+|+.|+|++|. +. .+. +. +++|++|+|..|.++......+. .+++|+.|+|+. |.. ..
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~ 241 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNV 241 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGG
T ss_pred HHHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHH
Confidence 344556777777777662 21 122 32 66777777777776633333333 567777777753 221 11
Q ss_pred cccccc--cccccccccccccccccchhhhhhc---cccccCeEECCCCcccCcC----CcCcCCccccCeEECCCCccc
Q 045493 583 LIPKNL--GELRKLHHLNLSNNQFSQEISIQIG---KLVQLSKLDLSHNSLGGNI----PSEICNLESLEYMNLLQNKLS 653 (1048)
Q Consensus 583 ~~~~~l--~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 653 (1048)
+ ...+ ..+++|++|+|++|.+++.....+. .+++|++|||+.|.|++.. +..+..+++|+.|+|++|.|+
T Consensus 242 l-~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 242 F-RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp T-GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred H-HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 1 1122 2478999999999999876554443 5789999999999998743 333456799999999999998
Q ss_pred CCccccccccCCccEEEeccce
Q 045493 654 GPIPSCFRRMHGLSSIDVSYNE 675 (1048)
Q Consensus 654 ~~~~~~~~~l~~L~~l~ls~N~ 675 (1048)
......+...- ...+++++|+
T Consensus 321 d~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 321 DEMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHHC-CSEEECCSBC
T ss_pred HHHHHHHHHHc-CCEEEecCCc
Confidence 66666565411 3568888886
No 410
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.98 E-value=1.8e-09 Score=115.50 Aligned_cols=135 Identities=13% Similarity=0.038 Sum_probs=100.1
Q ss_pred eecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcc-cCceeeEeeEeeeCCeEEEEEEccCCCCHH
Q 045493 783 LHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-HRNIVKFYGFCSHTQHLFLVYEYLERGSLA 861 (1048)
Q Consensus 783 ~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~L~ 861 (1048)
..|.|+.+.||++... ++.+++|......... ......|.+.++.+. +..+.++++++.+.+..|+||||++|.++.
T Consensus 21 ~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT-TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp CCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS-TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eccCCCCCeEEEEECC-CCcEEEEeCCcccCCC-HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 3577788899999765 6889999886532111 123455556666553 667888999998888999999999999998
Q ss_pred HHHhccccccccCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------------
Q 045493 862 TILSNEATAAELDWSKRVNVIKGVANALSYMHHDC--------------------------------------------- 896 (1048)
Q Consensus 862 ~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------------- 896 (1048)
+.+. +......++.+++++++.||+..
T Consensus 99 ~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (263)
T 3tm0_A 99 EEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL 170 (263)
T ss_dssp HHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHH
T ss_pred hccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHH
Confidence 7631 11233578899999999999810
Q ss_pred -----------CCCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493 897 -----------FPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927 (1048)
Q Consensus 897 -----------~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~ 927 (1048)
.+.++|||++|.||+++.++.+.|+||+.+.
T Consensus 171 ~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 0358999999999999876556799999775
No 411
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.88 E-value=4.2e-09 Score=112.46 Aligned_cols=129 Identities=12% Similarity=0.046 Sum_probs=92.5
Q ss_pred ec-ccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCc--eeeEeeEeeeCCeEEEEEEccCCCCH
Q 045493 784 HG-TGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRN--IVKFYGFCSHTQHLFLVYEYLERGSL 860 (1048)
Q Consensus 784 lG-~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~g~L 860 (1048)
++ .|..+.||++...+|+.+++|...... ......+...++.+.+.+ +.+++++....+..++||||++|.++
T Consensus 27 ~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 27 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred cccCCCCceEEEEecCCCCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 44 556699999987777889999875431 123445556666665434 55688888887889999999999887
Q ss_pred HHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------------
Q 045493 861 ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC-------------------------------------------- 896 (1048)
Q Consensus 861 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------------- 896 (1048)
. ... .+ ...++.++++.+..||+..
T Consensus 103 ~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 103 L--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp T--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred C--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 4 211 11 2356777888888888642
Q ss_pred -----------CCCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493 897 -----------FPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927 (1048)
Q Consensus 897 -----------~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~ 927 (1048)
.+.++|||++|.||+++.++.+.|+|||.+.
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 0139999999999999877667799999875
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.83 E-value=9.6e-09 Score=115.27 Aligned_cols=142 Identities=13% Similarity=0.192 Sum_probs=101.1
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEec--cCCCCcccchhhHHHHHHhhcc--cCceeeEeeEeeeC---CeEEEEEE
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLH--SLPTGEIGINQKGFVSEITEIR--HRNIVKFYGFCSHT---QHLFLVYE 853 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~--~~~~~~~~~~~~~~~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~e 853 (1048)
...++.|.++.||+.... +..+++|+.. .............+.+.++.+. +..+.++++++.+. +..|+|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 445799999999999876 4678888775 3221112234455666666665 45678888888766 45899999
Q ss_pred ccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 045493 854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC------------------------------------- 896 (1048)
Q Consensus 854 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------- 896 (1048)
|++|..+.+. ....++...+..++.+++++|+.||+..
T Consensus 122 ~v~G~~l~~~-----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 122 FVSGRVLWDQ-----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCCBCCCCT-----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred ecCCeecCCC-----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9999776431 1223667788899999999999999731
Q ss_pred ------------------CCCeEeeCCCCCCeEECCCCc--eEEeccccccc
Q 045493 897 ------------------FPPILHRDISSKKVLLDLEYK--AHVSDFGTAKF 928 (1048)
Q Consensus 897 ------------------~~~iiH~Dik~~NIll~~~~~--~kl~DfG~a~~ 928 (1048)
.+.++|||+++.||+++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 147999999999999997753 68999998874
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.66 E-value=3.6e-09 Score=105.99 Aligned_cols=70 Identities=16% Similarity=0.129 Sum_probs=33.9
Q ss_pred ccccCCCccCEEeecCc-cccCC----CccccccccccceeecccCccccccc----ccccccccccccccccccccch
Q 045493 538 KQLGKLTSLTSLTLNGN-QLSGD----IPLELGLLAELGYLDLSANRLSKLIP----KNLGELRKLHHLNLSNNQFSQE 607 (1048)
Q Consensus 538 ~~~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~----~~l~~l~~L~~L~Ls~N~l~~~ 607 (1048)
..+...++|++|+|++| .++.. +...+...++|++|+|++|+|+.... ..+...++|++|+|++|.|++.
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 34455566666666666 66522 22333444555555555555543221 2222334455555555555443
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.62 E-value=4.7e-09 Score=105.14 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=62.0
Q ss_pred ccccccCCCcEEEcccC-cccCC----cCccccCCCccCEEeecCccccCC----CccccccccccceeecccCcccccc
Q 045493 514 SEIGNMTQLHKLDFSSN-RLVGQ----IPKQLGKLTSLTSLTLNGNQLSGD----IPLELGLLAELGYLDLSANRLSKLI 584 (1048)
Q Consensus 514 ~~~~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~ 584 (1048)
..+...+.|++|+|++| .|... +...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|+...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34455666777777766 66532 233344556677777777766532 2333444466677777777666432
Q ss_pred ----ccccccccccccccc--ccccccchhhhhhc----cccccCeEECCCCccc
Q 045493 585 ----PKNLGELRKLHHLNL--SNNQFSQEISIQIG----KLVQLSKLDLSHNSLG 629 (1048)
Q Consensus 585 ----~~~l~~l~~L~~L~L--s~N~l~~~~~~~~~----~l~~L~~L~Ls~N~l~ 629 (1048)
..++...++|++|+| ++|.|++.+...+. ..++|++|+|++|.++
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 233444455666666 55555554433332 2344555555555443
No 415
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.59 E-value=1.1e-08 Score=111.95 Aligned_cols=184 Identities=20% Similarity=0.182 Sum_probs=113.7
Q ss_pred eeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcc-cCc--eeeEeeEeeeCC---eEEEEEEcc
Q 045493 782 VLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-HRN--IVKFYGFCSHTQ---HLFLVYEYL 855 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~ 855 (1048)
..++.|....||++. +.+++|+.... ........+.+.+..+. +.. +.+.+.+..... ..|+|||++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 347899999999863 56888875432 11223344555555552 222 344555443333 348899999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC--------------------------------------- 896 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------- 896 (1048)
+|.++.+... ..++..++..++.++++.++.||+..
T Consensus 99 ~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 99 KGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred CCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 9988765332 22566777788888888888888511
Q ss_pred ----------------CCCeEeeCCCCCCeEECC--CCceEEeccccccccCCCCCC--cccc---cc---------ccc
Q 045493 897 ----------------FPPILHRDISSKKVLLDL--EYKAHVSDFGTAKFLKPDSSN--WSEL---AG---------TCG 944 (1048)
Q Consensus 897 ----------------~~~iiH~Dik~~NIll~~--~~~~kl~DfG~a~~~~~~~~~--~~~~---~g---------t~~ 944 (1048)
.+.++|||++|.||+++. .+.+.++||+.+....+...- .... .+ ..+
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 135899999999999998 456789999998754321000 0000 00 001
Q ss_pred ccc-ccccccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 045493 945 YIA-PELAYTMRANEKCDVFNFGVLVLEVIEGKHPG 979 (1048)
Q Consensus 945 y~a-PE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~ 979 (1048)
+.. |+.... .....+.|++|.++|++.+|+.+|
T Consensus 254 ~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 111 222211 123468999999999999999774
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.41 E-value=7.4e-08 Score=101.10 Aligned_cols=63 Identities=33% Similarity=0.345 Sum_probs=27.6
Q ss_pred cccccccccccccccchh--hhhhccccccCeEECCCCcccCcCCcCcCCcc--ccCeEECCCCcccCC
Q 045493 591 LRKLHHLNLSNNQFSQEI--SIQIGKLVQLSKLDLSHNSLGGNIPSEICNLE--SLEYMNLLQNKLSGP 655 (1048)
Q Consensus 591 l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~ 655 (1048)
+++|+.|+|++|+|+++. +..+..+++|+.|||++|+|++. ..+..+. +|++|+|++|++.+.
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~ 235 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDT 235 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGG
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccc
Confidence 344444444444444422 12334445555555555555432 2222222 555555555555543
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.22 E-value=4.6e-07 Score=95.03 Aligned_cols=94 Identities=21% Similarity=0.214 Sum_probs=71.7
Q ss_pred ccccccccc--cccccccccchh---hhhhccccccCeEECCCCcccC--cCCcCcCCccccCeEECCCCcccCCccccc
Q 045493 588 LGELRKLHH--LNLSNNQFSQEI---SIQIGKLVQLSKLDLSHNSLGG--NIPSEICNLESLEYMNLLQNKLSGPIPSCF 660 (1048)
Q Consensus 588 l~~l~~L~~--L~Ls~N~l~~~~---~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 660 (1048)
|...+.|.. ++++.|+..... ......+++|+.|+||+|+|++ .++..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 555566666 777888654322 2223468999999999999997 4456677899999999999999976 334
Q ss_pred cccC--CccEEEeccceecCCCCCc
Q 045493 661 RRMH--GLSSIDVSYNELQGSIPHS 683 (1048)
Q Consensus 661 ~~l~--~L~~l~ls~N~l~~~~p~~ 683 (1048)
..+. .|++|++++|++++.+|..
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~ 239 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQ 239 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSH
T ss_pred hhcccCCcceEEccCCcCccccCcc
Confidence 4444 8999999999999988753
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.16 E-value=3.4e-06 Score=92.53 Aligned_cols=134 Identities=16% Similarity=0.147 Sum_probs=90.5
Q ss_pred ceeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhccc----CceeeEeeEeeeCCeEEEEEEcc
Q 045493 780 KMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRH----RNIVKFYGFCSHTQHLFLVYEYL 855 (1048)
Q Consensus 780 ~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h----~niv~~~~~~~~~~~~~lv~e~~ 855 (1048)
..+.++.|..+.||+. ++.+++|....... ......+.+.+..+.+ ..+.+++++ +..++||||+
T Consensus 41 ~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~---~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i 109 (320)
T 3r70_A 41 ELRYLSSGDDSDTFLC----NEQYVVKVPKRDSV---RISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYI 109 (320)
T ss_dssp CEEEEEECSSEEEEEE----TTTEEEEEESSHHH---HHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECC
T ss_pred EEEeCCCCCCceEEEE----CCEEEEEeCCcHHH---HHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeec
Confidence 4556799999999998 67788887633211 1123444444445543 223444444 4568999999
Q ss_pred CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCC--------------------------------------
Q 045493 856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCF-------------------------------------- 897 (1048)
Q Consensus 856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------------- 897 (1048)
+|.++.+... ..++..++..++.++++.++.||+...
T Consensus 110 ~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 110 KGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred CCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9988864321 124556667777888888888874321
Q ss_pred ----------------------CCeEeeCCCCCCeEECCCCceEEecccccccc
Q 045493 898 ----------------------PPILHRDISSKKVLLDLEYKAHVSDFGTAKFL 929 (1048)
Q Consensus 898 ----------------------~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 929 (1048)
+.++|||++|.||+++.++.+.++||+.+...
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 24599999999999998666799999998653
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.11 E-value=7e-07 Score=86.62 Aligned_cols=83 Identities=8% Similarity=0.167 Sum_probs=44.0
Q ss_pred ccceeecccCccccccccccccccccccccccccc-ccchhhhhhccc----cccCeEECCCCc-ccCcCCcCcCCcccc
Q 045493 569 ELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQ-FSQEISIQIGKL----VQLSKLDLSHNS-LGGNIPSEICNLESL 642 (1048)
Q Consensus 569 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~~~~~~~l~~L 642 (1048)
+|+.||++++.|+...-..+.++++|++|+|++|. |++.....++.+ ++|++|||++|. |++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34445555544444444444555555555555553 555555555443 356666666653 555444455556666
Q ss_pred CeEECCCCc
Q 045493 643 EYMNLLQNK 651 (1048)
Q Consensus 643 ~~L~L~~N~ 651 (1048)
++|++++++
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666654
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.01 E-value=2.4e-06 Score=82.83 Aligned_cols=84 Identities=12% Similarity=0.149 Sum_probs=44.2
Q ss_pred CCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccc----ccccc
Q 045493 521 QLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGEL----RKLHH 596 (1048)
Q Consensus 521 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l----~~L~~ 596 (1048)
.|+.||++++.|++.....+.++++|++|+|++|. .|+...-..++.+ ++|++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~-----------------------~ItD~gL~~L~~~~~~~~~L~~ 118 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCH-----------------------YIEDGCLERLSQLENLQKSMLE 118 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCT-----------------------TCCHHHHHHHHTCHHHHHHCCE
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCC-----------------------ccCHHHHHHHHhcccccCCCCE
Confidence 45555555555554444444555555555555553 1333222333332 35666
Q ss_pred ccccccc-ccchhhhhhccccccCeEECCCCc
Q 045493 597 LNLSNNQ-FSQEISIQIGKLVQLSKLDLSHNS 627 (1048)
Q Consensus 597 L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~ 627 (1048)
|+|++|. |++.+...+..+++|+.|+|+++.
T Consensus 119 L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 119 MEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp EEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred EEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 6666653 666555556666666666666653
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.95 E-value=3.5e-05 Score=82.62 Aligned_cols=75 Identities=15% Similarity=0.146 Sum_probs=54.7
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccC---ceeeEeeEeeeCCeEEEEEEccCC
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHR---NIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
.+.+|.|.++.||+++..+|+.++||+..... .........|.+.++.+++. .+.+++++. ..++||||+++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 45689999999999998888999999864322 11123456677777777654 577777764 35899999999
Q ss_pred CCH
Q 045493 858 GSL 860 (1048)
Q Consensus 858 g~L 860 (1048)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 874
No 422
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.94 E-value=3.2e-05 Score=82.56 Aligned_cols=135 Identities=13% Similarity=0.114 Sum_probs=90.8
Q ss_pred eeecccccc-cEEEEEEcC-CCceeeEEeccCCCCcccchhhHHHHHHhhcc-cCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493 782 VLHGTGGCG-TVYKAELTS-GDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-HRNIVKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 782 ~~lG~G~~g-~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
+.+..|..| .||+..... +..+++|+-.... ......+...++.+. +--|.++++++.+.+..++|||+++|.
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~----~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGSV----ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETHH----HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCCC----HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 344556555 589987764 4567777754321 112333444444332 223667888998899999999999998
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC------------------------------------------ 896 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------------ 896 (1048)
++.+.... .......++.++++.++.||...
T Consensus 106 ~~~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 106 TAFQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp EHHHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred cccccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 88776532 11234456777778888887420
Q ss_pred -------------CCCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493 897 -------------FPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927 (1048)
Q Consensus 897 -------------~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~ 927 (1048)
.+.++|||+.+.||+++.++.+-|+||+.+.
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 0237899999999999987777799999875
No 423
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.87 E-value=4.2e-05 Score=83.09 Aligned_cols=137 Identities=15% Similarity=0.103 Sum_probs=86.0
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccC---ceeeEeeEee-eCCeEEEEEEccC
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHR---NIVKFYGFCS-HTQHLFLVYEYLE 856 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~ 856 (1048)
...++.|....||+. ++.+++|+... .........|.+.+..+.+. .|.+.+.++. ..+..++||||++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 345788888899988 67788887432 11122344555556666532 3556666664 4556789999999
Q ss_pred CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 045493 857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHD----------------------------------------- 895 (1048)
Q Consensus 857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------------------------------------- 895 (1048)
|.++.+..-. .++......++.++++.++.||+.
T Consensus 97 G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 97 GQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp SEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred CeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 9887653210 123333444444444444444432
Q ss_pred ----------------CCCCeEeeCCCCCCeEECC---CCc-eEEecccccccc
Q 045493 896 ----------------CFPPILHRDISSKKVLLDL---EYK-AHVSDFGTAKFL 929 (1048)
Q Consensus 896 ----------------~~~~iiH~Dik~~NIll~~---~~~-~kl~DfG~a~~~ 929 (1048)
..+.++|||++|.||+++. ++. +.|+||+.+..-
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1236799999999999997 455 489999988643
No 424
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.86 E-value=4e-06 Score=82.95 Aligned_cols=86 Identities=13% Similarity=0.159 Sum_probs=39.5
Q ss_pred cccccccccccccccchhhhhhc----cccccCeEECCCCcccCcCC----cCcCCccccCeEECCCC---cccCC----
Q 045493 591 LRKLHHLNLSNNQFSQEISIQIG----KLVQLSKLDLSHNSLGGNIP----SEICNLESLEYMNLLQN---KLSGP---- 655 (1048)
Q Consensus 591 l~~L~~L~Ls~N~l~~~~~~~~~----~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N---~l~~~---- 655 (1048)
...|+.|+|++|+|++.+...++ ..+.|++|+|++|.|++... ..+..-+.|++|+|++| .+...
T Consensus 69 N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ 148 (197)
T 1pgv_A 69 SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMD 148 (197)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHH
T ss_pred CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHH
Confidence 34444444444444443333222 33445555555555543222 22233345666666543 23321
Q ss_pred ccccccccCCccEEEecccee
Q 045493 656 IPSCFRRMHGLSSIDVSYNEL 676 (1048)
Q Consensus 656 ~~~~~~~l~~L~~l~ls~N~l 676 (1048)
+...+..-+.|+.|++++|..
T Consensus 149 ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 149 MMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHhCCCcCeEeccCCCc
Confidence 233444556677777766543
No 425
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.82 E-value=7e-06 Score=81.20 Aligned_cols=12 Identities=25% Similarity=0.144 Sum_probs=5.4
Q ss_pred cccCeEECCCCc
Q 045493 640 ESLEYMNLLQNK 651 (1048)
Q Consensus 640 ~~L~~L~L~~N~ 651 (1048)
++|+.|+++.|.
T Consensus 157 ~tL~~L~l~~~~ 168 (197)
T 1pgv_A 157 ESLLRVGISFAS 168 (197)
T ss_dssp SSCCEEECCCCC
T ss_pred CCcCeEeccCCC
Confidence 444444444443
No 426
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.77 E-value=7.4e-05 Score=83.13 Aligned_cols=74 Identities=5% Similarity=0.000 Sum_probs=48.7
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCc--eeeEeeEeeeC-CeEEEEEEccCC
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRN--IVKFYGFCSHT-QHLFLVYEYLER 857 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~e~~~~ 857 (1048)
...++.|....+|+.+. +++.+++|..... .....+...+..+.... +.++++++... +..|+||||++|
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 34578899999999976 4778888876431 12344444555554322 45666666654 678999999998
Q ss_pred CCHH
Q 045493 858 GSLA 861 (1048)
Q Consensus 858 g~L~ 861 (1048)
.++.
T Consensus 119 ~~l~ 122 (362)
T 3ovc_A 119 VTLQ 122 (362)
T ss_dssp EETT
T ss_pred CCcc
Confidence 6553
No 427
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.72 E-value=7.5e-05 Score=83.23 Aligned_cols=80 Identities=8% Similarity=-0.080 Sum_probs=49.4
Q ss_pred eee-cccccccEEEEEEc-------CCCceeeEEeccCCC--CcccchhhHHHHHHhhcc-c--CceeeEeeEeeeC---
Q 045493 782 VLH-GTGGCGTVYKAELT-------SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIR-H--RNIVKFYGFCSHT--- 845 (1048)
Q Consensus 782 ~~l-G~G~~g~Vy~~~~~-------~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~-h--~niv~~~~~~~~~--- 845 (1048)
+.+ +.|....+|+.... +++.+++|....... .........|.+.++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999998764 256778877543220 101123444555555553 2 2466777777654
Q ss_pred CeEEEEEEccCCCCHH
Q 045493 846 QHLFLVYEYLERGSLA 861 (1048)
Q Consensus 846 ~~~~lv~e~~~~g~L~ 861 (1048)
+..|+||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999986654
No 428
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.58 E-value=0.00019 Score=79.46 Aligned_cols=30 Identities=27% Similarity=0.397 Sum_probs=27.4
Q ss_pred CCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAK 927 (1048)
Q Consensus 898 ~~iiH~Dik~~NIll~~~~~~kl~DfG~a~ 927 (1048)
+.++|||+++.||+++.++.+.++||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 489999999999999888899999999875
No 429
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.47 E-value=0.00033 Score=79.22 Aligned_cols=76 Identities=13% Similarity=0.024 Sum_probs=42.2
Q ss_pred eeeecccccccEEEEEEc-CCCceeeEEeccCCC--C-c---ccchhhHHHHHHhhcc---cCceeeEeeEeeeCCeEEE
Q 045493 781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--G-E---IGINQKGFVSEITEIR---HRNIVKFYGFCSHTQHLFL 850 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~-~---~~~~~~~~~~~l~~l~---h~niv~~~~~~~~~~~~~l 850 (1048)
...+|.|.++.||++... +++.++||....... . . .......+.+.+..+. ...+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 345799999999999764 467889987653221 0 0 1111233334444432 2234455544 3444689
Q ss_pred EEEccCCC
Q 045493 851 VYEYLERG 858 (1048)
Q Consensus 851 v~e~~~~g 858 (1048)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.42 E-value=0.00039 Score=79.25 Aligned_cols=77 Identities=13% Similarity=0.117 Sum_probs=49.6
Q ss_pred CCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcccccc--ccccccccccccC---CCCchhhHHHHHHHHHHH
Q 045493 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSELAG--TCGYIAPELAYTM---RANEKCDVFNFGVLVLEV 972 (1048)
Q Consensus 898 ~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~Dvws~Gvvl~el 972 (1048)
+.++|||++|.||+++.++ ++++||+.+..-.+... ...... ...|++|+..... ......++.+....+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3899999999999998876 99999998875321110 000111 2346777665421 112345666888888888
Q ss_pred HhCC
Q 045493 973 IEGK 976 (1048)
Q Consensus 973 ltg~ 976 (1048)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 431
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.25 E-value=0.00089 Score=72.24 Aligned_cols=138 Identities=14% Similarity=0.115 Sum_probs=84.2
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcc---cCceeeEeeEeeeCCeEEEEEEccCC
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR---HRNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
.+.++.|....+|+... +++.+++|...... ......|.+.++.+. ...+.++++++...+..++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~----~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERSY----RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGGG----HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCccc----HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 44579999999999986 46778888764321 122334444444442 35677888888878889999999999
Q ss_pred CCHH--------HH---Hhcccc-c------------------cccCHHHHH---HHH----------------HHHHHH
Q 045493 858 GSLA--------TI---LSNEAT-A------------------AELDWSKRV---NVI----------------KGVANA 888 (1048)
Q Consensus 858 g~L~--------~~---l~~~~~-~------------------~~l~~~~~~---~i~----------------~~i~~~ 888 (1048)
..+. +. ++.... . ..-+|.+.. ++. ..++..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7642 11 122111 0 012454322 111 111111
Q ss_pred -HHHHHh-CCCCCeEeeCCCCCCeEECCCCceEEeccc
Q 045493 889 -LSYMHH-DCFPPILHRDISSKKVLLDLEYKAHVSDFG 924 (1048)
Q Consensus 889 -L~~LH~-~~~~~iiH~Dik~~NIll~~~~~~kl~DfG 924 (1048)
...|.. ...+.++|+|+.+.||+++.++ +.|.||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123321 2235899999999999999887 8899984
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.24 E-value=0.00035 Score=64.58 Aligned_cols=44 Identities=20% Similarity=0.257 Sum_probs=21.0
Q ss_pred CCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCcc
Q 045493 17 EFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQF 60 (1048)
Q Consensus 17 ~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 60 (1048)
++|..+++++++|||++|+|+.+.+..|..+++|++|+|++|.+
T Consensus 24 ~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 24 SLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred cCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444555555555555544444444444444444444444
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.81 E-value=0.0018 Score=59.74 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=44.3
Q ss_pred eEECCCCccc-CcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCC
Q 045493 620 KLDLSHNSLG-GNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIP 681 (1048)
Q Consensus 620 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p 681 (1048)
.+|.+++.|+ ..+|..+. ++|++|+|++|+|+...+..|..++.|+.|+|++|+|.....
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 6777777775 24554432 468888888888887777788888888888888888876543
No 434
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.72 E-value=0.0062 Score=65.17 Aligned_cols=75 Identities=15% Similarity=0.154 Sum_probs=47.6
Q ss_pred eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhccc---CceeeEeeEeeeCCeEEEEEEccCC
Q 045493 781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRH---RNIVKFYGFCSHTQHLFLVYEYLER 857 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h---~niv~~~~~~~~~~~~~lv~e~~~~ 857 (1048)
...+|.|..+.||+.+..+|+.+++|+....... .....+.|.+.++.+.- --+.+++++. . .++||||+++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~-~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~--~~lv~e~l~~ 94 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPA-LDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D--RTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC-CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T--TEEEEECCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc-hhhHHHHHHHHHHHHHhhCCCCcceEEecc--C--ceEEEEeecc
Confidence 3457999999999999999999999986543221 12234445555554421 1234444442 2 3789999987
Q ss_pred CCH
Q 045493 858 GSL 860 (1048)
Q Consensus 858 g~L 860 (1048)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.68 E-value=0.006 Score=66.89 Aligned_cols=32 Identities=31% Similarity=0.369 Sum_probs=27.7
Q ss_pred CCeEeeCCCCCCeEECCC----CceEEecccccccc
Q 045493 898 PPILHRDISSKKVLLDLE----YKAHVSDFGTAKFL 929 (1048)
Q Consensus 898 ~~iiH~Dik~~NIll~~~----~~~kl~DfG~a~~~ 929 (1048)
+.++|||+.+.||+++.+ +.+.++||+.+..-
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 479999999999999875 67999999988753
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.51 E-value=0.0093 Score=64.26 Aligned_cols=29 Identities=17% Similarity=0.213 Sum_probs=25.1
Q ss_pred CeEeeCCCCCCeEECCCCceEEeccccccc
Q 045493 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKF 928 (1048)
Q Consensus 899 ~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 928 (1048)
.++|+|+.+.||+ ..++.+.++||..+..
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 5899999999999 5667889999998764
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.40 E-value=0.016 Score=63.22 Aligned_cols=142 Identities=11% Similarity=0.075 Sum_probs=74.4
Q ss_pred eeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccC--ceeeEeeE-----eeeCCeEEEEEEc
Q 045493 782 VLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHR--NIVKFYGF-----CSHTQHLFLVYEY 854 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~--niv~~~~~-----~~~~~~~~lv~e~ 854 (1048)
..++ |....||+....+|+.+++|......... .....+...+..+... .+.+++.. ....+..++||||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~--~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTA--DQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCH--HHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCCH--HHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 3466 88889999887777789999876321111 1222233333333211 13333332 2235567899999
Q ss_pred cCCCCHH-----HH---------Hhccc------cccccCHHHH----HHH---------------HHHHHHHHHHHHhC
Q 045493 855 LERGSLA-----TI---------LSNEA------TAAELDWSKR----VNV---------------IKGVANALSYMHHD 895 (1048)
Q Consensus 855 ~~~g~L~-----~~---------l~~~~------~~~~l~~~~~----~~i---------------~~~i~~~L~~LH~~ 895 (1048)
++|..+. .+ ++... .....++... ..+ ...+.+.++.+...
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9885431 11 11100 0011222111 001 11111122233221
Q ss_pred ----CCCCeEeeCCCCCCeEECCCCceEEeccccccc
Q 045493 896 ----CFPPILHRDISSKKVLLDLEYKAHVSDFGTAKF 928 (1048)
Q Consensus 896 ----~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 928 (1048)
....++|||+++.||+++ + .+.++||+.+..
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 123688999999999999 4 899999988764
No 438
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.29 E-value=0.026 Score=61.32 Aligned_cols=142 Identities=11% Similarity=0.049 Sum_probs=73.9
Q ss_pred eeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcc-----cCceeeEe-e--EeeeCCeEEEEEE
Q 045493 782 VLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-----HRNIVKFY-G--FCSHTQHLFLVYE 853 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-----h~niv~~~-~--~~~~~~~~~lv~e 853 (1048)
..++.|....+|+....++ .+++|........ .....+...+..+. .|.++... | +....+..++||+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~---~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRVEK---NDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS 103 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC---C---CHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCCCH---HHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence 3467788899999987644 6888887642111 12233333343332 23333211 1 1223466799999
Q ss_pred ccCCCCHHH-----H---------Hhccc----cc-----cccCHHHHHH------------HHHHHHHHHHHHHhC---
Q 045493 854 YLERGSLAT-----I---------LSNEA----TA-----AELDWSKRVN------------VIKGVANALSYMHHD--- 895 (1048)
Q Consensus 854 ~~~~g~L~~-----~---------l~~~~----~~-----~~l~~~~~~~------------i~~~i~~~L~~LH~~--- 895 (1048)
|++|..+.. + ++... .. ....|..... +...+.+.+++++..
T Consensus 104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~ 183 (322)
T 2ppq_A 104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK 183 (322)
T ss_dssp CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence 999864311 0 11110 00 0011222110 011234445555432
Q ss_pred -CCCCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493 896 -CFPPILHRDISSKKVLLDLEYKAHVSDFGTAK 927 (1048)
Q Consensus 896 -~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~ 927 (1048)
...+++|+|+.+.||+++.++.+.++||+.+.
T Consensus 184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 12379999999999999877666899999775
No 439
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.20 E-value=0.019 Score=62.92 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=27.8
Q ss_pred CCeEeeCCCCCCeEECCCCceEEeccccccc
Q 045493 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAKF 928 (1048)
Q Consensus 898 ~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 928 (1048)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999988764
No 440
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.95 E-value=0.028 Score=55.68 Aligned_cols=102 Identities=17% Similarity=0.154 Sum_probs=66.2
Q ss_pred CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCccc
Q 045493 859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE 938 (1048)
Q Consensus 859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 938 (1048)
+|.++++.. ..++++++++.++.|.+.+|.-.-.+.. + ..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-----------
Confidence 899999653 4569999999999999999877622100 1 1223456889999999988764 1111
Q ss_pred cccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCC
Q 045493 939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP 978 (1048)
Q Consensus 939 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p 978 (1048)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1223467888763 3567899999999999998874443
No 441
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.76 E-value=0.021 Score=64.74 Aligned_cols=72 Identities=15% Similarity=0.155 Sum_probs=41.2
Q ss_pred eeeecccccccEEEEEEcC--------CCceeeEEeccCCCCcccchhhHHHHHHhhcccCce-eeEeeEeeeCCeEEEE
Q 045493 781 MVLHGTGGCGTVYKAELTS--------GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNI-VKFYGFCSHTQHLFLV 851 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~ni-v~~~~~~~~~~~~~lv 851 (1048)
.+.++.|....||++...+ ++.+++|+...... ......+...+..+...++ .++++.+.+ .+|
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v 150 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 150 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEE
Confidence 3457888889999998753 46677777633111 0112234444444432233 456665542 389
Q ss_pred EEccCCCC
Q 045493 852 YEYLERGS 859 (1048)
Q Consensus 852 ~e~~~~g~ 859 (1048)
+||++|-+
T Consensus 151 ~e~l~G~~ 158 (429)
T 1nw1_A 151 EEYIPSRP 158 (429)
T ss_dssp ECCCCEEE
T ss_pred EEEeCCcc
Confidence 99998633
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.66 E-value=0.047 Score=62.12 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=43.5
Q ss_pred eeeecccccccEEEEEEcC-CCceeeEEeccCCCCcccchhhHHHHHHhhcccCce-eeEeeEeeeCCeEEEEEEccCCC
Q 045493 781 MVLHGTGGCGTVYKAELTS-GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNI-VKFYGFCSHTQHLFLVYEYLERG 858 (1048)
Q Consensus 781 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g 858 (1048)
.+.|+.|-...+|++...+ ++.+++|+..... +.......+...+..+...++ .++++++. + ..||||++|-
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~ 186 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGY 186 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCc
Confidence 3457888899999998764 3667777664321 222233455555665543333 46677663 2 3599999874
Q ss_pred CH
Q 045493 859 SL 860 (1048)
Q Consensus 859 ~L 860 (1048)
++
T Consensus 187 ~l 188 (458)
T 2qg7_A 187 AL 188 (458)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.55 E-value=0.029 Score=62.35 Aligned_cols=29 Identities=14% Similarity=0.230 Sum_probs=24.4
Q ss_pred CCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493 898 PPILHRDISSKKVLLDLEYKAHVSDFGTAK 927 (1048)
Q Consensus 898 ~~iiH~Dik~~NIll~~~~~~kl~DfG~a~ 927 (1048)
..++|+|+.+.||+++.++ +.++||..+.
T Consensus 212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 212 IVFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp EEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred eEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 3689999999999998654 8999998775
No 444
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.41 E-value=0.036 Score=61.28 Aligned_cols=141 Identities=13% Similarity=0.116 Sum_probs=74.9
Q ss_pred eeecccccccEEEEEEcC--------CCceeeEEeccCCCCcccchhhHHHHHHhhcc-cCceeeEeeEeeeCCeEEEEE
Q 045493 782 VLHGTGGCGTVYKAELTS--------GDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-HRNIVKFYGFCSHTQHLFLVY 852 (1048)
Q Consensus 782 ~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 852 (1048)
+.+..|-...+|++...+ ++.+++++..... .......+|.+.++.+. +.-..++++++.+ .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~--~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL--QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc--chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 346778888999998752 3667777753211 11222334444454443 2223556666543 3899
Q ss_pred EccCCCCHHH-----------H---H---hccc--cccccC--HHHHHHHHHHHHH-------------------HHHHH
Q 045493 853 EYLERGSLAT-----------I---L---SNEA--TAAELD--WSKRVNVIKGVAN-------------------ALSYM 892 (1048)
Q Consensus 853 e~~~~g~L~~-----------~---l---~~~~--~~~~l~--~~~~~~i~~~i~~-------------------~L~~L 892 (1048)
||++|..+.. + + +... ...... |.++.++..++.. .+.++
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999854421 1 1 1110 011122 3455555544322 12333
Q ss_pred H----hC-CCCCeEeeCCCCCCeEECCC----CceEEeccccccc
Q 045493 893 H----HD-CFPPILHRDISSKKVLLDLE----YKAHVSDFGTAKF 928 (1048)
Q Consensus 893 H----~~-~~~~iiH~Dik~~NIll~~~----~~~kl~DfG~a~~ 928 (1048)
. .. ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 21 12368999999999999876 7899999998763
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.01 E-value=0.37 Score=53.39 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=26.1
Q ss_pred CeEeeCCCCCCeEECCC------CceEEecccccc
Q 045493 899 PILHRDISSKKVLLDLE------YKAHVSDFGTAK 927 (1048)
Q Consensus 899 ~iiH~Dik~~NIll~~~------~~~kl~DfG~a~ 927 (1048)
.++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 68899999999999876 789999998775
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=91.36 E-value=0.89 Score=50.86 Aligned_cols=29 Identities=14% Similarity=0.331 Sum_probs=25.9
Q ss_pred CeEeeCCCCCCeEECCCCceEEeccccccc
Q 045493 899 PILHRDISSKKVLLDLEYKAHVSDFGTAKF 928 (1048)
Q Consensus 899 ~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 928 (1048)
.++|+|+.+.||+ +.++.+.++||..|..
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 6889999999999 7788999999998763
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=87.06 E-value=0.096 Score=36.86 Aligned_cols=30 Identities=23% Similarity=0.438 Sum_probs=19.5
Q ss_pred EEehhhhhHHHHHHHhhhhceeeeeecccc
Q 045493 729 VIVPLLSGAFLLSLVLIGMCFNFRRRKRTD 758 (1048)
Q Consensus 729 i~~~~~~~~~~~~lv~~~~~~~~r~~~~~~ 758 (1048)
|+.+++.|+++++++..+++|++|||+.++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 566677777776666666666666665543
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=86.74 E-value=0.097 Score=36.71 Aligned_cols=30 Identities=20% Similarity=0.432 Sum_probs=19.2
Q ss_pred EEehhhhhHHHHHHHhhhhceeeeeecccc
Q 045493 729 VIVPLLSGAFLLSLVLIGMCFNFRRRKRTD 758 (1048)
Q Consensus 729 i~~~~~~~~~~~~lv~~~~~~~~r~~~~~~ 758 (1048)
|+.+++.|+++++++..++++++|||++++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 566666667766666666666666665544
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.16 E-value=2.2 Score=42.24 Aligned_cols=115 Identities=7% Similarity=0.103 Sum_probs=80.7
Q ss_pred ccCceeeEeeEeeeCCeEEEEEEccCCC-CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCC
Q 045493 831 RHRNIVKFYGFCSHTQHLFLVYEYLERG-SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKK 909 (1048)
Q Consensus 831 ~h~niv~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~N 909 (1048)
.||+.++. .+-...+.+.+.|+.-+.+ ++.. + ...+...+++++..|+....+++.. +|=-+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i------k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I------KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G------GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H------HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 58888876 5666667676667665432 2222 2 2367788999999999888777655 888999999
Q ss_pred eEECCCCceEEeccccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCc
Q 045493 910 VLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGH 980 (1048)
Q Consensus 910 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~ 980 (1048)
|+++.++.+++.=.|+-..+. |. ..+...=.-.+=+++..++++++.|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~-----------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVD-----------------PL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBS-----------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCC-----------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999998777543322 22 11222233467788899999998875
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=84.00 E-value=0.28 Score=54.95 Aligned_cols=30 Identities=23% Similarity=0.357 Sum_probs=24.9
Q ss_pred CeEeeCCCCCCeEE------CCCCceEEeccccccc
Q 045493 899 PILHRDISSKKVLL------DLEYKAHVSDFGTAKF 928 (1048)
Q Consensus 899 ~iiH~Dik~~NIll------~~~~~~kl~DfG~a~~ 928 (1048)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999988753
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.06 E-value=5.9 Score=39.28 Aligned_cols=116 Identities=9% Similarity=0.039 Sum_probs=79.6
Q ss_pred ccCceeeEeeEeeeCCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHH-HHHhCCCCCeEeeCCCCCC
Q 045493 831 RHRNIVKFYGFCSHTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALS-YMHHDCFPPILHRDISSKK 909 (1048)
Q Consensus 831 ~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~iiH~Dik~~N 909 (1048)
.||++ -..+-.+.+.+.+.++.-+++.=...++ ..+...+++.+..++.... +++.. +|--+.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 57888 4445567777888888764543233332 2677889999999988776 56654 888899999
Q ss_pred eEECCCCceEEeccccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcc
Q 045493 910 VLLDLEYKAHVSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHF 981 (1048)
Q Consensus 910 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 981 (1048)
|++|.++.+++.=.|+-..+ +|.- .+..-=.-.+=|++..++.+++.|+.
T Consensus 115 L~f~~~~~p~i~hRGi~~~l-----------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL-----------------PPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp EEECTTCCEEESCCEETTTB-----------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EEEeCCCcEEEEEcCCcccC-----------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999999877754322 2322 11112233577888889999888753
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=71.30 E-value=0.77 Score=32.16 Aligned_cols=26 Identities=15% Similarity=0.327 Sum_probs=12.4
Q ss_pred hhhhhHHHHHHHhhhhceeeeeeccc
Q 045493 732 PLLSGAFLLSLVLIGMCFNFRRRKRT 757 (1048)
Q Consensus 732 ~~~~~~~~~~lv~~~~~~~~r~~~~~ 757 (1048)
+.++|+++++++.+++.+++|||+..
T Consensus 16 ~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 16 SAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHHHHhheehhhhh
Confidence 34445444444444455555555443
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=51.28 E-value=29 Score=29.52 Aligned_cols=46 Identities=17% Similarity=0.113 Sum_probs=22.8
Q ss_pred ccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccccc
Q 045493 59 QFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALSY 105 (1048)
Q Consensus 59 ~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~ 105 (1048)
.++.+-..+|.++++|+.+.|..+ ++.+-..+|.++++|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444455555555555555443 3334444555555555555543
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=48.97 E-value=33 Score=29.12 Aligned_cols=45 Identities=20% Similarity=0.163 Sum_probs=24.1
Q ss_pred ccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcC
Q 045493 436 FVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSN 481 (1048)
Q Consensus 436 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~ 481 (1048)
++.+....|.+|.+|+++.+-.+ ++.+...+|..+.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34444455666666666655542 4445555555555555555543
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=48.53 E-value=3.7 Score=28.46 Aligned_cols=13 Identities=38% Similarity=0.381 Sum_probs=6.6
Q ss_pred EEehhhhhHHHHH
Q 045493 729 VIVPLLSGAFLLS 741 (1048)
Q Consensus 729 i~~~~~~~~~~~~ 741 (1048)
++++++.|+++++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 4445555555544
No 456
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=43.77 E-value=5.9 Score=44.84 Aligned_cols=55 Identities=7% Similarity=-0.174 Sum_probs=14.0
Q ss_pred cccEEEEEEcC-CCceee------EEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEee
Q 045493 789 CGTVYKAELTS-GDTRAV------KKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCS 843 (1048)
Q Consensus 789 ~g~Vy~~~~~~-~~~vav------k~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~ 843 (1048)
||.||+|.+.. ..+||| |+.+...... .......+.+.+...+|||+++.+++..
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 99999998864 367888 6554322111 1111122233345568999999988753
No 457
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=36.00 E-value=7.4 Score=26.43 Aligned_cols=7 Identities=14% Similarity=0.453 Sum_probs=2.7
Q ss_pred hhhhhHH
Q 045493 732 PLLSGAF 738 (1048)
Q Consensus 732 ~~~~~~~ 738 (1048)
++++|++
T Consensus 15 GiVvG~v 21 (38)
T 2k1k_A 15 AVIFGLL 21 (38)
T ss_dssp HHHHHHH
T ss_pred eeehHHH
Confidence 3334433
No 458
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=31.95 E-value=8 Score=25.57 Aligned_cols=20 Identities=20% Similarity=0.476 Sum_probs=9.6
Q ss_pred hhHHHHHHHhhhhceeeeee
Q 045493 735 SGAFLLSLVLIGMCFNFRRR 754 (1048)
Q Consensus 735 ~~~~~~~lv~~~~~~~~r~~ 754 (1048)
+|.++++++..+..+++|||
T Consensus 15 vglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 15 VGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHTTTTTHHHHHC
T ss_pred HHHHHHHHHHHHhheEEeec
Confidence 34444444444455555554
No 459
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=25.80 E-value=10 Score=27.95 Aligned_cols=18 Identities=33% Similarity=0.748 Sum_probs=9.2
Q ss_pred EEEEehhhhhHHHHHHHh
Q 045493 727 LFVIVPLLSGAFLLSLVL 744 (1048)
Q Consensus 727 ~~i~~~~~~~~~~~~lv~ 744 (1048)
++++++++.|..++++++
T Consensus 13 wiIi~svl~GLllL~li~ 30 (54)
T 2knc_A 13 WWVLVGVLGGLLLLTILV 30 (54)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344555555655555443
Done!