Query         045493
Match_columns 1048
No_of_seqs    877 out of 6815
Neff          9.6 
Searched_HMMs 13730
Date          Mon Mar 25 04:02:38 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045493.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045493hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 2.5E-47 1.8E-51  406.9  18.0  246  780-1044    9-259 (271)
  2 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 4.8E-47 3.5E-51  405.1  19.6  247  781-1048   10-258 (263)
  3 d1yhwa1 d.144.1.7 (A:249-541)  100.0   1E-46 7.4E-51  406.6  22.0  247  778-1044   22-269 (293)
  4 d2j4za1 d.144.1.7 (A:126-388)  100.0 7.2E-47 5.3E-51  401.9  19.6  241  781-1044   11-254 (263)
  5 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 5.9E-47 4.3E-51  411.5  18.9  249  781-1048   31-289 (299)
  6 d2java1 d.144.1.7 (A:3-271) Se 100.0 3.7E-47 2.7E-51  405.9  16.2  251  780-1044    8-265 (269)
  7 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 1.5E-46 1.1E-50  409.2  20.6  249  778-1044   11-263 (307)
  8 d2jfla1 d.144.1.7 (A:21-308) S 100.0 1.1E-46 8.2E-51  406.1  18.2  250  777-1044   13-268 (288)
  9 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 1.2E-46   9E-51  403.5  18.0  250  781-1048   13-269 (276)
 10 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 2.6E-46 1.9E-50  401.2  19.6  247  781-1047   18-265 (272)
 11 d1opja_ d.144.1.7 (A:) Abelson 100.0 3.3E-46 2.4E-50  403.0  19.6  248  781-1047   22-271 (287)
 12 d1t4ha_ d.144.1.7 (A:) Protein 100.0 5.1E-46 3.7E-50  396.9  20.0  242  782-1044   15-265 (270)
 13 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 4.2E-46 3.1E-50  401.0  19.5  244  784-1047   17-267 (285)
 14 d1mqba_ d.144.1.7 (A:) epha2 r 100.0 5.7E-46 4.2E-50  401.4  20.4  251  780-1048   11-269 (283)
 15 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 1.2E-45   9E-50  391.5  22.4  245  782-1047   10-256 (258)
 16 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 4.5E-46 3.3E-50  410.4  19.4  251  781-1047   42-322 (325)
 17 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 3.2E-46 2.3E-50  411.1  16.7  256  780-1044   10-297 (322)
 18 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 1.2E-45 8.5E-50  396.5  19.5  245  782-1047   13-265 (277)
 19 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 5.3E-46 3.9E-50  400.4  15.9  243  780-1043   12-259 (288)
 20 d1jksa_ d.144.1.7 (A:) Death-a 100.0 6.5E-45 4.8E-49  395.5  22.8  249  778-1044   12-270 (293)
 21 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 2.4E-45 1.8E-49  399.5  18.2  244  778-1044   17-266 (309)
 22 d1koaa2 d.144.1.7 (A:5915-6264 100.0 6.4E-45 4.7E-49  403.1  19.9  248  780-1045   30-280 (350)
 23 d1fmka3 d.144.1.7 (A:249-533)  100.0 8.6E-45 6.3E-49  390.3  19.1  248  781-1048   22-270 (285)
 24 d1koba_ d.144.1.7 (A:) Twitchi 100.0   1E-44 7.4E-49  401.8  19.9  249  778-1044   31-282 (352)
 25 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 1.6E-44 1.1E-48  397.3  21.0  244  780-1044    9-260 (337)
 26 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 6.7E-45 4.9E-49  397.0  16.1  253  779-1048   16-298 (301)
 27 d1byga_ d.144.1.7 (A:) Carboxy 100.0 1.5E-44 1.1E-48  383.6  17.2  243  781-1048   12-256 (262)
 28 d1phka_ d.144.1.7 (A:) gamma-s 100.0 6.9E-44   5E-48  381.9  21.2  248  780-1045    7-270 (277)
 29 d1vjya_ d.144.1.7 (A:) Type I  100.0 5.5E-44   4E-48  389.1  20.2  260  782-1048    9-294 (303)
 30 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 9.1E-44 6.6E-48  388.2  20.8  249  782-1048   33-290 (311)
 31 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 5.2E-44 3.8E-48  384.3  18.1  247  781-1047   12-264 (273)
 32 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 1.4E-43 1.1E-47  390.5  21.5  245  782-1044   18-271 (335)
 33 d1xkka_ d.144.1.7 (A:) EGF rec 100.0 7.9E-44 5.7E-48  391.3  19.3  249  779-1047   12-268 (317)
 34 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 4.9E-44 3.6E-48  390.6  17.1  259  780-1044    2-279 (299)
 35 d1fota_ d.144.1.7 (A:) cAMP-de 100.0 1.3E-43 9.4E-48  387.5  20.0  240  781-1044    9-256 (316)
 36 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 1.5E-43 1.1E-47  387.6  20.1  250  781-1048   15-282 (309)
 37 d1xjda_ d.144.1.7 (A:) Protein 100.0 6.7E-44 4.9E-48  390.5  17.2  243  781-1044    7-254 (320)
 38 d1ywna1 d.144.1.7 (A:818-1166) 100.0 8.1E-44 5.9E-48  388.9  17.2  252  781-1048   18-293 (299)
 39 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 1.1E-43 8.1E-48  382.9  17.4  252  780-1048   11-273 (277)
 40 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 2.2E-43 1.6E-47  384.3  19.5  251  781-1048   18-293 (299)
 41 d1tkia_ d.144.1.7 (A:) Titin,  100.0 2.2E-43 1.6E-47  386.9  19.0  245  781-1044   10-257 (321)
 42 d1u46a_ d.144.1.7 (A:) Activat 100.0 1.2E-43 8.5E-48  380.0  16.3  249  781-1048   13-271 (273)
 43 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 3.5E-43 2.6E-47  384.0  19.5  252  780-1048   24-291 (308)
 44 d1omwa3 d.144.1.7 (A:186-549)  100.0 2.5E-43 1.8E-47  392.8  18.5  244  781-1044    9-264 (364)
 45 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0   2E-43 1.5E-47  386.9  16.5  252  781-1048   28-304 (311)
 46 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 5.3E-43 3.9E-47  388.0  19.6  242  779-1044   44-293 (350)
 47 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 3.9E-42 2.8E-46  374.7  19.6  261  780-1045    6-283 (298)
 48 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 2.8E-42 2.1E-46  370.1  16.6  235  781-1044    9-254 (273)
 49 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 6.6E-42 4.8E-46  371.3  18.9  260  779-1044    5-280 (286)
 50 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0   5E-41 3.6E-45  368.4  19.6  260  779-1044   10-292 (305)
 51 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 3.2E-40 2.3E-44  368.0  20.5  256  779-1044   23-302 (350)
 52 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 6.2E-40 4.5E-44  364.9  17.8  261  778-1045   10-295 (345)
 53 d1csna_ d.144.1.7 (A:) Casein  100.0 2.3E-39 1.6E-43  351.3  20.6  250  781-1047   10-274 (293)
 54 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 3.1E-39 2.3E-43  352.1  20.2  259  780-1044    6-282 (292)
 55 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 2.3E-39 1.7E-43  357.1  18.9  261  779-1045   13-305 (318)
 56 d1ckia_ d.144.1.7 (A:) Casein  100.0 3.1E-39 2.2E-43  352.6  19.4  251  780-1047   11-274 (299)
 57 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 2.2E-39 1.6E-43  361.4  18.4  257  778-1045   20-301 (346)
 58 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 6.8E-40   5E-44  359.2  13.2  249  779-1044   27-291 (322)
 59 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 1.5E-38 1.1E-42  355.1  19.5  258  778-1045   19-311 (355)
 60 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 1.4E-38   1E-42  352.2  17.7  251  780-1044   39-318 (328)
 61 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 8.1E-38 5.9E-42  349.6  14.3  257  778-1044   20-300 (348)
 62 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 1.8E-33 1.3E-37  316.3  19.1  259  780-1045   17-328 (362)
 63 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 1.3E-29 9.6E-34  278.3  17.9  258  449-710    51-312 (313)
 64 d2omza2 c.10.2.1 (A:33-416) In 100.0   2E-27 1.4E-31  269.4  30.4  344  301-675    41-384 (384)
 65 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 2.9E-29 2.1E-33  275.6  13.5  263   14-294    40-306 (313)
 66 d2omza2 c.10.2.1 (A:33-416) In 100.0 4.7E-27 3.5E-31  266.2  30.9   82  181-268    42-123 (384)
 67 d1xkua_ c.10.2.7 (A:) Decorin   99.9 3.6E-26 2.6E-30  249.7  24.3  284    3-329    14-299 (305)
 68 d1ozna_ c.10.2.7 (A:) Reticulo  99.9 1.5E-25 1.1E-29  241.8  19.1  223    4-269    16-239 (284)
 69 d1xkua_ c.10.2.7 (A:) Decorin   99.9 6.8E-25 4.9E-29  239.5  23.8  246  425-677    32-285 (305)
 70 d1ozna_ c.10.2.7 (A:) Reticulo  99.9 1.8E-24 1.3E-28  233.3  19.4  209  473-681    33-242 (284)
 71 d1p9ag_ c.10.2.7 (G:) von Will  99.9 1.1E-22 7.8E-27  216.6  19.2  198  449-653    11-208 (266)
 72 d1p9ag_ c.10.2.7 (G:) von Will  99.9 2.1E-22 1.6E-26  214.2  18.7  198   25-268    11-208 (266)
 73 d1zara2 d.144.1.9 (A:91-281) R  99.8 4.7E-21 3.4E-25  192.4  10.0  169  781-970     5-190 (191)
 74 d1jl5a_ c.10.2.6 (A:) Leucine   99.8   9E-19 6.5E-23  194.7  27.1  200   24-268    38-237 (353)
 75 d1jl5a_ c.10.2.6 (A:) Leucine   99.8 3.2E-18 2.3E-22  190.1  28.0  296    2-365    41-337 (353)
 76 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.8 1.4E-21   1E-25  226.2  -3.7  111  255-390     2-126 (460)
 77 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.8 4.2E-19   3E-23  185.9  15.6  210   15-263    20-233 (242)
 78 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.8 2.6E-21 1.9E-25  224.0  -3.3  374  305-678     3-440 (460)
 79 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.8 1.3E-18 9.7E-23  182.0  15.7  218  427-671    11-232 (242)
 80 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.8 4.5E-19 3.2E-23  177.9  10.2  127    3-133    12-139 (192)
 81 d1h6ua2 c.10.2.1 (A:36-262) In  99.8 1.8E-18 1.3E-22  178.8  13.7  186  471-672    40-225 (227)
 82 d1h6ua2 c.10.2.1 (A:36-262) In  99.7   3E-18 2.2E-22  177.1  14.2  188  445-648    38-225 (227)
 83 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.7 9.4E-19 6.9E-23  175.5   7.7  172  500-678    12-184 (192)
 84 d1h6ta2 c.10.2.1 (A:31-240) In  99.7 2.8E-18   2E-22  174.6   7.9  185   25-264    25-209 (210)
 85 d1h6ta2 c.10.2.1 (A:31-240) In  99.7 3.1E-17 2.3E-21  166.8  14.7  146  516-673    64-209 (210)
 86 d2omxa2 c.10.2.1 (A:37-235) In  99.7 5.3E-18 3.8E-22  171.0   8.8  181   25-260    19-199 (199)
 87 d2omxa2 c.10.2.1 (A:37-235) In  99.7 5.1E-17 3.7E-21  163.7  14.4  142  516-669    58-199 (199)
 88 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.6 2.3E-16 1.7E-20  174.1   2.4  236  444-679    27-317 (344)
 89 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.6 2.8E-16   2E-20  173.5   1.8  243  393-655    24-317 (344)
 90 d1a9na_ c.10.2.4 (A:) Spliceso  99.5 2.2E-15 1.6E-19  145.2   7.4  111  516-629    14-125 (162)
 91 d2astb2 c.10.1.3 (B:2136-2419)  99.5 1.4E-15   1E-19  162.2   4.7  224  451-679    26-261 (284)
 92 d1a9na_ c.10.2.4 (A:) Spliceso  99.5 5.2E-15 3.8E-19  142.5   8.2  128  540-670    14-145 (162)
 93 d1dcea3 c.10.2.2 (A:444-567) R  99.5 2.7E-14 1.9E-18  130.4  10.3  101  524-653     2-103 (124)
 94 d1dcea3 c.10.2.2 (A:444-567) R  99.5 2.4E-14 1.8E-18  130.8   9.2  103  499-606     1-104 (124)
 95 d2astb2 c.10.1.3 (B:2136-2419)  99.5 7.9E-15 5.7E-19  156.2   6.1  210  449-661    47-267 (284)
 96 d1m9la_ c.10.3.1 (A:) Outer ar  99.4   1E-14 7.6E-19  145.6  -0.5  112  513-629    41-153 (198)
 97 d1m9la_ c.10.3.1 (A:) Outer ar  99.4   1E-14 7.6E-19  145.6  -0.9  144  521-670    24-180 (198)
 98 d2ifga3 c.10.2.7 (A:36-191) Hi  99.3 3.3E-12 2.4E-16  121.6   8.9  107  545-653     9-116 (156)
 99 d2ifga3 c.10.2.7 (A:36-191) Hi  99.3 4.1E-12   3E-16  121.0   9.2   46  538-583    50-95  (156)
100 d1koha1 c.10.2.3 (A:201-362) m  98.7 1.5E-09 1.1E-13  103.6   0.8   67  563-629    60-128 (162)
101 d1koha1 c.10.2.3 (A:201-362) m  98.6 2.2E-09 1.6E-13  102.4   1.3  124  546-676    24-156 (162)
102 d1pgva_ c.10.1.1 (A:) Tropomod  97.9 1.8E-06 1.3E-10   82.2   3.8   61  615-675    71-142 (167)
103 d1pgva_ c.10.1.1 (A:) Tropomod  97.9 2.4E-06 1.7E-10   81.2   4.1   11  640-650   131-141 (167)
104 d1j7la_ d.144.1.6 (A:) Type II  97.9 2.9E-05 2.1E-09   79.8  12.5  131  787-927    25-212 (263)
105 d1nd4a_ d.144.1.6 (A:) Aminogl  97.7   9E-05 6.6E-09   75.6  11.6  130  783-927    17-204 (255)
106 d1io0a_ c.10.1.1 (A:) Tropomod  97.5   2E-05 1.5E-09   74.6   3.0   86  542-627    44-143 (166)
107 d1io0a_ c.10.1.1 (A:) Tropomod  97.4 1.7E-05 1.3E-09   75.1   1.9   87  590-676    44-144 (166)
108 d2pula1 d.144.1.6 (A:5-396) Me  96.9  0.0016 1.2E-07   70.4  11.0   29  899-928   224-252 (392)
109 d1zyla1 d.144.1.6 (A:4-328) Rd  96.0   0.013 9.4E-07   61.2  11.2   29  898-928   192-220 (325)
110 d2ppqa1 d.144.1.6 (A:5-320) Ho  95.2   0.041   3E-06   56.9  11.4   30  898-927   183-212 (316)
111 d1nw1a_ d.144.1.8 (A:) Choline  94.5   0.063 4.6E-06   57.5  11.0   73  781-859    47-127 (395)

No 1  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.5e-47  Score=406.89  Aligned_cols=246  Identities=24%  Similarity=0.316  Sum_probs=196.4

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG  858 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  858 (1048)
                      ..+.||+|+||+||+|+++ +++.||||++......+......+|++.++.++|||||++++++.+.+..|+||||+++|
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg   88 (271)
T d1nvra_           9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG   88 (271)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCC
Confidence            3457899999999999986 688999999876544443445667788889999999999999999999999999999999


Q ss_pred             CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC--CCc
Q 045493          859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNW  936 (1048)
Q Consensus       859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~--~~~  936 (1048)
                      +|.++++..   ..+++.++..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+|+......  ...
T Consensus        89 ~L~~~l~~~---~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~  162 (271)
T d1nvra_          89 ELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL  162 (271)
T ss_dssp             EGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred             cHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccCCccccc
Confidence            999998643   3589999999999999999999999   99999999999999999999999999998765332  234


Q ss_pred             cccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCC-CCCCchhH
Q 045493          937 SELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSR-LPPPLGEV 1014 (1048)
Q Consensus       937 ~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1014 (1048)
                      ...+||+.|||||++.+..+ +.++||||+||++|||+||+.||.....          ............ ...+   .
T Consensus       163 ~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~----------~~~~~~~~~~~~~~~~~---~  229 (271)
T d1nvra_         163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD----------SCQEYSDWKEKKTYLNP---W  229 (271)
T ss_dssp             CCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSST----------TSHHHHHHHTTCTTSTT---G
T ss_pred             cceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCCh----------HHHHHHHHhcCCCCCCc---c
Confidence            55789999999999988776 6789999999999999999999863221          111111111111 1111   1


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      .....++.+++.+||+.||++|||++|+++
T Consensus       230 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         230 KKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            223456778999999999999999999976


No 2  
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.8e-47  Score=405.13  Aligned_cols=247  Identities=21%  Similarity=0.328  Sum_probs=190.1

Q ss_pred             eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCCH
Q 045493          781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSL  860 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  860 (1048)
                      .+.||+|+||+||+|++.+++.||||++......  .....++++.+++++|||||+++|+|.+.+..++||||+++|+|
T Consensus        10 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~--~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L   87 (263)
T d1sm2a_          10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL   87 (263)
T ss_dssp             EEEEECCSSCCEEEEEETTTEEEEEEECCSSSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             EEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCc--HHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcH
Confidence            4468999999999999988889999998753322  23456677778999999999999999999999999999999999


Q ss_pred             HHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC-cccc
Q 045493          861 ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN-WSEL  939 (1048)
Q Consensus       861 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~~~  939 (1048)
                      .+++...  ...+++..+..++.|||.||+|||+.   +|+||||||+||++++++.+||+|||+|+........ ....
T Consensus        88 ~~~l~~~--~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~  162 (263)
T d1sm2a_          88 SDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT  162 (263)
T ss_dssp             HHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC----------------
T ss_pred             HHHhhcc--ccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCCceeecce
Confidence            9998653  34588999999999999999999999   9999999999999999999999999999876544332 2345


Q ss_pred             ccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCC-CcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHH
Q 045493          940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP-GHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKL 1018 (1048)
Q Consensus       940 ~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1048)
                      .||+.|||||++.+..|+.++|||||||++|||+|+..| |...           ........+..+......   ....
T Consensus       163 ~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~-----------~~~~~~~~i~~~~~~~~p---~~~~  228 (263)
T d1sm2a_         163 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----------SNSEVVEDISTGFRLYKP---RLAS  228 (263)
T ss_dssp             --CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSC-----------CHHHHHHHHHHTCCCCCC---TTSC
T ss_pred             ecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCC-----------CHHHHHHHHHhcCCCCCc---cccC
Confidence            789999999999999999999999999999999996544 3321           112222222222221111   1223


Q ss_pred             HHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493         1019 KSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus      1019 ~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      .++.+++.+||+.||++||||+|++++|++
T Consensus       229 ~~l~~li~~cl~~~p~~Rps~~~il~~L~~  258 (263)
T d1sm2a_         229 THVYQIMNHCWKERPEDRPAFSRLLRQLAE  258 (263)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            468899999999999999999999999874


No 3  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-46  Score=406.64  Aligned_cols=247  Identities=24%  Similarity=0.386  Sum_probs=202.1

Q ss_pred             CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493          778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE  856 (1048)
Q Consensus       778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  856 (1048)
                      +...+.||+|+||+||+|++. +++.||||++....... .....++++.++.++|||||++++++.+.+..|+||||++
T Consensus        22 Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~  100 (293)
T d1yhwa1          22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (293)
T ss_dssp             BCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSC-HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             cEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChH-HHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence            344556899999999999875 68999999987543322 2345667777889999999999999999999999999999


Q ss_pred             CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493          857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW  936 (1048)
Q Consensus       857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~  936 (1048)
                      +|+|.+++.+.    .+++.++..++.||+.||+|||++   +||||||||+|||++.+|++||+|||+|+.+.......
T Consensus       101 gg~L~~~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~  173 (293)
T d1yhwa1         101 GGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR  173 (293)
T ss_dssp             TCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred             CCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeeccccccc
Confidence            99999988542    488999999999999999999999   99999999999999999999999999999887666666


Q ss_pred             cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493          937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus       937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
                      ...+||+.|||||++.+..|+.++||||+||++|||++|+.||......           ...........+. ...+..
T Consensus       174 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~-----------~~~~~~~~~~~~~-~~~~~~  241 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-----------RALYLIATNGTPE-LQNPEK  241 (293)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----------HHHHHHHHHCSCC-CSSGGG
T ss_pred             cccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHH-----------HHHHHHHhCCCCC-CCCccc
Confidence            6778999999999999999999999999999999999999998633211           1111111111111 111223


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1017 KLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      ....+.+++.+||+.||++|||++|+++
T Consensus       242 ~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         242 LSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            3456888999999999999999999975


No 4  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.2e-47  Score=401.87  Aligned_cols=241  Identities=26%  Similarity=0.392  Sum_probs=198.3

Q ss_pred             eeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493          781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER  857 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  857 (1048)
                      .+.||+|+||+||+|+++ +++.||+|++.....  ........+|++.++.++|||||++++++.+.+..|+||||+++
T Consensus        11 ~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~   90 (263)
T d2j4za1          11 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL   90 (263)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence            456899999999999986 678899999865321  12223345667778899999999999999999999999999999


Q ss_pred             CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493          858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS  937 (1048)
Q Consensus       858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  937 (1048)
                      |+|.+++.+.+   .+++..+..++.||+.||+|||++   +||||||||+|||++.++.+||+|||+|+.....  ...
T Consensus        91 g~L~~~l~~~~---~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~--~~~  162 (263)
T d2j4za1          91 GTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRT  162 (263)
T ss_dssp             CBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC--CCE
T ss_pred             CcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCCC--ccc
Confidence            99999997543   489999999999999999999999   9999999999999999999999999999866432  334


Q ss_pred             ccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493          938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus       938 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
                      ..+||+.|||||++.+..|+.++||||+||++|||++|+.||...+           .......+.......+    ...
T Consensus       163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-----------~~~~~~~i~~~~~~~p----~~~  227 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-----------YQETYKRISRVEFTFP----DFV  227 (263)
T ss_dssp             ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS-----------HHHHHHHHHTTCCCCC----TTS
T ss_pred             ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCC-----------HHHHHHHHHcCCCCCC----ccC
Confidence            5689999999999999999999999999999999999999986422           1222233333332222    122


Q ss_pred             HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1018 LKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      ..++.+++.+||+.||++|||++|+++
T Consensus       228 s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         228 TEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            346788999999999999999999986


No 5  
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=5.9e-47  Score=411.47  Aligned_cols=249  Identities=23%  Similarity=0.399  Sum_probs=188.1

Q ss_pred             eeeecccccccEEEEEEcC-CC---ceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493          781 MVLHGTGGCGTVYKAELTS-GD---TRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE  856 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~-~~---~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  856 (1048)
                      .+.||+|+||+||+|+++. ++   .||||++.............+|++.+++++|||||+++|+|.+.+..++|||||+
T Consensus        31 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~  110 (299)
T d1jpaa_          31 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFME  110 (299)
T ss_dssp             EEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecC
Confidence            4579999999999998863 33   4777877654443333344566777889999999999999999999999999999


Q ss_pred             CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC-
Q 045493          857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN-  935 (1048)
Q Consensus       857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~-  935 (1048)
                      +|+|.+++...  ...+++.++..++.|||+||+|||+.   +|+||||||+|||++.++.+||+|||+|+.+...... 
T Consensus       111 ~g~L~~~~~~~--~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~  185 (299)
T d1jpaa_         111 NGSLDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP  185 (299)
T ss_dssp             TEEHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred             CCcceeeeccc--cCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCcccceEccCCCCcc
Confidence            99999998653  33589999999999999999999999   9999999999999999999999999999877544322 


Q ss_pred             ----ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCC
Q 045493          936 ----WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP 1010 (1048)
Q Consensus       936 ----~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1048)
                          .....||+.|||||++.++.++.++|||||||++|||+| |+.||.....           ......+..+..++.
T Consensus       186 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~-----------~~~~~~i~~~~~~~~  254 (299)
T d1jpaa_         186 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-----------QDVINAIEQDYRLPP  254 (299)
T ss_dssp             ----------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----------HHHHHHHHTTCCCCC
T ss_pred             eeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHcCCCCCC
Confidence                123457899999999999999999999999999999998 8999763221           122222322222222


Q ss_pred             chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493         1011 LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus      1011 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      .   ......+.+++.+||+.||++||||+||++.|++
T Consensus       255 ~---~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~  289 (299)
T d1jpaa_         255 P---MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK  289 (299)
T ss_dssp             C---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             C---ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            1   2234568889999999999999999999999863


No 6  
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-47  Score=405.94  Aligned_cols=251  Identities=25%  Similarity=0.337  Sum_probs=187.0

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeee--CCeEEEEEEcc
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSH--TQHLFLVYEYL  855 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~  855 (1048)
                      ..+.||+|+||+||+|+.+ +++.||||++......+. .....+|++.+++++|||||++++++.+  .+..|+||||+
T Consensus         8 ~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~   87 (269)
T d2java1           8 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC   87 (269)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECC
T ss_pred             EeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecC
Confidence            3457899999999999886 688999999876543321 2223456677788999999999999864  45689999999


Q ss_pred             CCCCHHHHHhccc-cccccCHHHHHHHHHHHHHHHHHHHhCCC--CCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493          856 ERGSLATILSNEA-TAAELDWSKRVNVIKGVANALSYMHHDCF--PPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD  932 (1048)
Q Consensus       856 ~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~--~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~  932 (1048)
                      ++|+|.+++.+.. ....+++..++.++.|++.||+|||++..  .+||||||||+|||++.++.+||+|||+|+.+...
T Consensus        88 ~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~  167 (269)
T d2java1          88 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD  167 (269)
T ss_dssp             TTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC---
T ss_pred             CCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccC
Confidence            9999999986532 33458999999999999999999998621  14999999999999999999999999999987665


Q ss_pred             CCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493          933 SSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus       933 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
                      .......+||+.|||||++.+..|+.++||||+||++|||+||+.||...+           .......+..+..+....
T Consensus       168 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~-----------~~~~~~~i~~~~~~~~~~  236 (269)
T d2java1         168 TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-----------QKELAGKIREGKFRRIPY  236 (269)
T ss_dssp             --------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----------HHHHHHHHHHTCCCCCCT
T ss_pred             CCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCC-----------HHHHHHHHHcCCCCCCCc
Confidence            555567789999999999999999999999999999999999999986322           122233333333332221


Q ss_pred             hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                         ....++.+++.+||+.||++|||++|+++
T Consensus       237 ---~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         237 ---RYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---ccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence               22346888999999999999999999985


No 7  
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.5e-46  Score=409.16  Aligned_cols=249  Identities=21%  Similarity=0.260  Sum_probs=187.5

Q ss_pred             CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493          778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE  856 (1048)
Q Consensus       778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  856 (1048)
                      +.-...||+|+||+||+|+++ +++.||||++.............+|+..++.++|||||++++++.+.+..|+|||||+
T Consensus        11 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~   90 (307)
T d1a06a_          11 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS   90 (307)
T ss_dssp             EEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             eEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence            334557999999999999986 6888999998765443333445667888899999999999999999999999999999


Q ss_pred             CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC---CCCceEEeccccccccCCCC
Q 045493          857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD---LEYKAHVSDFGTAKFLKPDS  933 (1048)
Q Consensus       857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~---~~~~~kl~DfG~a~~~~~~~  933 (1048)
                      ||+|.+++...   ..+++..+..++.||+.||+|||+.   +|+||||||+||+++   +++.+||+|||+|+..... 
T Consensus        91 gg~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~-  163 (307)
T d1a06a_          91 GGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-  163 (307)
T ss_dssp             SCBHHHHHHTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC----------
T ss_pred             CCcHHHhhhcc---cCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEccCC-
Confidence            99999999753   3489999999999999999999999   999999999999995   4789999999999866433 


Q ss_pred             CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493          934 SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus       934 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
                      ......+||+.|||||++.+..|+.++||||+||++|||++|+.||....           .......+.......+...
T Consensus       164 ~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----------~~~~~~~i~~~~~~~~~~~  232 (307)
T d1a06a_         164 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN-----------DAKLFEQILKAEYEFDSPY  232 (307)
T ss_dssp             ---------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----------HHHHHHHHHTTCCCCCTTT
T ss_pred             CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCC-----------HHHHHHHHhccCCCCCCcc
Confidence            33345689999999999999999999999999999999999999986322           1222233333333322222


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      ....+.++.+++.+||++||++|||++|+++
T Consensus       233 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         233 WDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             TTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            2334456889999999999999999999987


No 8  
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-46  Score=406.09  Aligned_cols=250  Identities=24%  Similarity=0.328  Sum_probs=200.7

Q ss_pred             CCcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493          777 FEGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL  855 (1048)
Q Consensus       777 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  855 (1048)
                      ++.....||+|+||+||+|++. +++.||||++....... .....+|++.+++++|||||++++++.+.+..|+||||+
T Consensus        13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGG-GGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHH-HHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            4444567999999999999986 67889999987643332 334566788889999999999999999999999999999


Q ss_pred             CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493          856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN  935 (1048)
Q Consensus       856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~  935 (1048)
                      ++|+|.+++.+.  ...+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|+........
T Consensus        92 ~~g~L~~~~~~~--~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~  166 (288)
T d2jfla1          92 AGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR  166 (288)
T ss_dssp             TTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHH
T ss_pred             CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCCccc
Confidence            999999998643  23489999999999999999999999   9999999999999999999999999999865433333


Q ss_pred             ccccccccccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCC
Q 045493          936 WSELAGTCGYIAPELAY-----TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP 1010 (1048)
Q Consensus       936 ~~~~~gt~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1048)
                      ....+||+.|||||++.     ...|+.++||||+||++|||+||+.||.....           ......+.....+. 
T Consensus       167 ~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~-----------~~~~~~i~~~~~~~-  234 (288)
T d2jfla1         167 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP-----------MRVLLKIAKSEPPT-  234 (288)
T ss_dssp             HTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCG-----------GGHHHHHHHSCCCC-
T ss_pred             ccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCH-----------HHHHHHHHcCCCCC-
Confidence            44578999999999984     45689999999999999999999999864321           11222222222211 


Q ss_pred             chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1011 LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1011 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      ...+.....++.+++.+||+.||++|||++|+++
T Consensus       235 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         235 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             CSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1112334457889999999999999999999986


No 9  
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-46  Score=403.53  Aligned_cols=250  Identities=25%  Similarity=0.372  Sum_probs=190.2

Q ss_pred             eeeecccccccEEEEEEcCCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493          781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS  859 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~  859 (1048)
                      .+.||+|+||+||+|+++  ..||||+++...... ......+++..+++++|||||++++++.+ +..++||||+++|+
T Consensus        13 ~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey~~~g~   89 (276)
T d1uwha_          13 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSS   89 (276)
T ss_dssp             CSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCCEEE
T ss_pred             EEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEecCCCCC
Confidence            346899999999999865  469999986543322 22334556777888999999999999865 45899999999999


Q ss_pred             HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC--CCcc
Q 045493          860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS--SNWS  937 (1048)
Q Consensus       860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~  937 (1048)
                      |.++++..  ...+++..+..++.|||+||+|||++   +||||||||+|||++.++.+||+|||+|+......  ....
T Consensus        90 L~~~l~~~--~~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~  164 (276)
T d1uwha_          90 LYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE  164 (276)
T ss_dssp             HHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC-----------
T ss_pred             HHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeeccccCCccccc
Confidence            99999653  23589999999999999999999999   99999999999999999999999999998765432  2335


Q ss_pred             cccccccccccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCc-hh
Q 045493          938 ELAGTCGYIAPELAYT---MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL-GE 1013 (1048)
Q Consensus       938 ~~~gt~~y~aPE~~~~---~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1013 (1048)
                      ...||+.|||||++.+   ..|+.++|||||||++|||+||+.||.....          .......+.....++.. ..
T Consensus       165 ~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~----------~~~~~~~~~~~~~~p~~~~~  234 (276)
T d1uwha_         165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN----------RDQIIFMVGRGYLSPDLSKV  234 (276)
T ss_dssp             -CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----------HHHHHHHHHHTSCCCCGGGS
T ss_pred             ccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCCh----------HHHHHHHHhcCCCCCcchhc
Confidence            5689999999999864   3589999999999999999999999864321          11111111111111111 11


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493         1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus      1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      .....+++.+++.+||+.||++||||+|+++.|++
T Consensus       235 ~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~  269 (276)
T d1uwha_         235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL  269 (276)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            12334568899999999999999999999999863


No 10 
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-46  Score=401.15  Aligned_cols=247  Identities=19%  Similarity=0.323  Sum_probs=197.2

Q ss_pred             eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCCH
Q 045493          781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSL  860 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  860 (1048)
                      .+.||+|+||+||+|++++++.||||+++.....  .....+++..+++++|||||+++|++.+ +..++||||+++|+|
T Consensus        18 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~--~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~~g~L   94 (272)
T d1qpca_          18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSL   94 (272)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBH
T ss_pred             eEEEecCCCcEEEEEEECCCCEEEEEEEccCcCC--HHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCCCCcH
Confidence            3468999999999999988889999998654322  2345667777889999999999998865 457999999999999


Q ss_pred             HHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-Ccccc
Q 045493          861 ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS-NWSEL  939 (1048)
Q Consensus       861 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~~  939 (1048)
                      .+++.... ...+++..+.+++.||++||+|||+.   +|+||||||+|||+++++.+||+|||+|+....... .....
T Consensus        95 ~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~  170 (272)
T d1qpca_          95 VDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA  170 (272)
T ss_dssp             HHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTC
T ss_pred             HHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCCcccccccc
Confidence            99886543 33589999999999999999999999   999999999999999999999999999998754432 23456


Q ss_pred             ccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHHH
Q 045493          940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKLK 1019 (1048)
Q Consensus       940 ~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1019 (1048)
                      .||+.|||||++.++.++.++|||||||++|||+||..|+...          .........+..+..+....   ....
T Consensus       171 ~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~----------~~~~~~~~~i~~~~~~~~p~---~~~~  237 (272)
T d1qpca_         171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG----------MTNPEVIQNLERGYRMVRPD---NCPE  237 (272)
T ss_dssp             CCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT----------CCHHHHHHHHHTTCCCCCCT---TCCH
T ss_pred             CCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCC----------CCHHHHHHHHHhcCCCCCcc---cChH
Confidence            7899999999999989999999999999999999976654311          11122222332222222211   2334


Q ss_pred             HHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493         1020 SMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus      1020 ~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
                      ++.+++.+||+.||++||||+||+++|+
T Consensus       238 ~l~~li~~cl~~~P~~Rpt~~ei~~~L~  265 (272)
T d1qpca_         238 ELYQLMRLCWKERPEDRPTFDYLRSVLE  265 (272)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence            6888999999999999999999999886


No 11 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=3.3e-46  Score=403.01  Aligned_cols=248  Identities=21%  Similarity=0.291  Sum_probs=198.9

Q ss_pred             eeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493          781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS  859 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~  859 (1048)
                      .+.||+|+||+||+|++. +++.||||+++.....  .....++++.+++++|||||+++|+|.+.+..++||||+++|+
T Consensus        22 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~--~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~   99 (287)
T d1opja_          22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN   99 (287)
T ss_dssp             EEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             eeEEeeCCCeEEEEEEECCCCeEEEEEEECCccch--HHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcc
Confidence            346899999999999886 5788999998654322  2334567788899999999999999999999999999999999


Q ss_pred             HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC-ccc
Q 045493          860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN-WSE  938 (1048)
Q Consensus       860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~~  938 (1048)
                      |.+++.... ...+++..+..++.||++||+|||++   +|+||||||+|||+++++.+||+|||+|+....+... ...
T Consensus       100 l~~~l~~~~-~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~  175 (287)
T d1opja_         100 LLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG  175 (287)
T ss_dssp             HHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETT
T ss_pred             hHHHhhhcc-ccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCCCCceeecc
Confidence            999996543 34589999999999999999999999   9999999999999999999999999999976544332 234


Q ss_pred             cccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHH
Q 045493          939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKL 1018 (1048)
Q Consensus       939 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1048)
                      ..||+.|||||++.+..|+.++|||||||++|||++|..||....          ........+..+..++..   ....
T Consensus       176 ~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~----------~~~~~~~~i~~~~~~~~~---~~~~  242 (287)
T d1opja_         176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----------DLSQVYELLEKDYRMERP---EGCP  242 (287)
T ss_dssp             EEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTC----------CHHHHHHHHHTTCCCCCC---TTCC
T ss_pred             ccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcc----------hHHHHHHHHhcCCCCCCC---ccch
Confidence            458899999999999999999999999999999999877753211          111111222112111111   1233


Q ss_pred             HHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493         1019 KSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus      1019 ~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
                      .++.+++.+||+.||++||||+|+++.|+
T Consensus       243 ~~l~~li~~cl~~dP~~Rps~~ei~~~L~  271 (287)
T d1opja_         243 EKVYELMRACWQWNPSDRPSFAEIHQAFE  271 (287)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            56889999999999999999999999875


No 12 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.1e-46  Score=396.93  Aligned_cols=242  Identities=22%  Similarity=0.311  Sum_probs=191.3

Q ss_pred             eeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeee----CCeEEEEEEcc
Q 045493          782 VLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSH----TQHLFLVYEYL  855 (1048)
Q Consensus       782 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~  855 (1048)
                      +.||+|+||+||+|++. +++.||+|++....... ......+|++.+++++|||||++++++.+    ...+|+||||+
T Consensus        15 ~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~   94 (270)
T d1t4ha_          15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM   94 (270)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCC
Confidence            35899999999999886 57889999987643322 22234567778899999999999999864    35689999999


Q ss_pred             CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeeCCCCCCeEEC-CCCceEEeccccccccCCC
Q 045493          856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPP--ILHRDISSKKVLLD-LEYKAHVSDFGTAKFLKPD  932 (1048)
Q Consensus       856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dik~~NIll~-~~~~~kl~DfG~a~~~~~~  932 (1048)
                      ++|+|.+++++..   .+++..++.++.||+.||+|||++   +  |+||||||+|||++ +++.+||+|||+|+...  
T Consensus        95 ~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~gl~yLH~~---~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~--  166 (270)
T d1t4ha_          95 TSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--  166 (270)
T ss_dssp             CSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC--
T ss_pred             CCCcHHHHHhccc---cccHHHHHHHHHHHHHHHHHHHHC---CCCEEeCCcChhhceeeCCCCCEEEeecCcceecc--
Confidence            9999999997543   488999999999999999999998   6  99999999999997 57999999999998643  


Q ss_pred             CCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493          933 SSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus       933 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
                      .......+||+.|||||++.+ +++.++||||+||++|||++|+.||....          ........+..+..+..  
T Consensus       167 ~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~----------~~~~~~~~i~~~~~~~~--  233 (270)
T d1t4ha_         167 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----------NAAQIYRRVTSGVKPAS--  233 (270)
T ss_dssp             TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----------SHHHHHHHHTTTCCCGG--
T ss_pred             CCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcc----------cHHHHHHHHHcCCCCcc--
Confidence            233456789999999998865 69999999999999999999999986321          11122222222222211  


Q ss_pred             hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      .......++.+++.+||++||++|||++|+++
T Consensus       234 ~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         234 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            11223346788999999999999999999987


No 13 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-46  Score=400.97  Aligned_cols=244  Identities=23%  Similarity=0.278  Sum_probs=195.8

Q ss_pred             ecccccccEEEEEEc---CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCCH
Q 045493          784 HGTGGCGTVYKAELT---SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSL  860 (1048)
Q Consensus       784 lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  860 (1048)
                      ||+|+||+||+|.++   ++..||||+++............+|++.+++++|||||+++|++.. +..|+||||+++|+|
T Consensus        17 iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L   95 (285)
T d1u59a_          17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPL   95 (285)
T ss_dssp             EECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEH
T ss_pred             EecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCcH
Confidence            899999999999765   2346899998765443333344566777888999999999999865 468999999999999


Q ss_pred             HHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC---cc
Q 045493          861 ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN---WS  937 (1048)
Q Consensus       861 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~---~~  937 (1048)
                      .+++...  ...+++..+..++.||++||+|||++   +|+||||||+||+++.++.+||+|||+|+.+......   ..
T Consensus        96 ~~~l~~~--~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~  170 (285)
T d1u59a_          96 HKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS  170 (285)
T ss_dssp             HHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCC
T ss_pred             HHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhccccccccccccc
Confidence            9998543  34589999999999999999999999   9999999999999999999999999999877644322   23


Q ss_pred             ccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493          938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus       938 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
                      ...||+.|||||++.++.++.++|||||||++|||+| |+.||....           .......+..+..++..   ..
T Consensus       171 ~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~-----------~~~~~~~i~~~~~~~~p---~~  236 (285)
T d1u59a_         171 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----------GPEVMAFIEQGKRMECP---PE  236 (285)
T ss_dssp             SSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------THHHHHHHHTTCCCCCC---TT
T ss_pred             ccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHcCCCCCCC---Cc
Confidence            4568999999999999999999999999999999998 899986322           11222233333222221   12


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493         1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus      1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
                      ...++.+++.+||+.||++||||.++++.|+
T Consensus       237 ~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~  267 (285)
T d1u59a_         237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMR  267 (285)
T ss_dssp             CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            3356889999999999999999999998875


No 14 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.7e-46  Score=401.35  Aligned_cols=251  Identities=22%  Similarity=0.383  Sum_probs=193.0

Q ss_pred             ceeeecccccccEEEEEEcCC-----CceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493          780 KMVLHGTGGCGTVYKAELTSG-----DTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY  854 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~~~-----~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  854 (1048)
                      ..++||+|+||+||+|.++..     ..||||++.............++++.+++++|||||+++|++.+.+..++||||
T Consensus        11 ~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~   90 (283)
T d1mqba_          11 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY   90 (283)
T ss_dssp             EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             eeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEe
Confidence            456799999999999987643     368999986544433333445677778899999999999999999999999999


Q ss_pred             cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493          855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS  934 (1048)
Q Consensus       855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~  934 (1048)
                      +.+|++.+++...  ...+++.++..++.||+.|++|||+.   +|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus        91 ~~~~~l~~~~~~~--~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  165 (283)
T d1mqba_          91 MENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  165 (283)
T ss_dssp             CTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             cccCcchhhhhcc--cccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence            9999999988643  34589999999999999999999999   999999999999999999999999999987654332


Q ss_pred             C---ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493          935 N---WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus       935 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
                      .   .....||+.|||||++.++.++.++|||||||++|||++|..|+...          .........+.++..++..
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~----------~~~~~~~~~i~~~~~~~~~  235 (283)
T d1mqba_         166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE----------LSNHEVMKAINDGFRLPTP  235 (283)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT----------CCHHHHHHHHHTTCCCCCC
T ss_pred             cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCcccc----------CCHHHHHHHHhccCCCCCc
Confidence            2   23456899999999999999999999999999999999976664311          1122233333333322222


Q ss_pred             hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493         1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus      1012 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                         ......+.+++.+||+.||++||||+||+++|++
T Consensus       236 ---~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~  269 (283)
T d1mqba_         236 ---MDCPSAIYQLMMQCWQQERARRPKFADIVSILDK  269 (283)
T ss_dssp             ---TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             ---hhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHH
Confidence               2234568899999999999999999999998863


No 15 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-45  Score=391.52  Aligned_cols=245  Identities=21%  Similarity=0.355  Sum_probs=202.1

Q ss_pred             eeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCCHH
Q 045493          782 VLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSLA  861 (1048)
Q Consensus       782 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~  861 (1048)
                      +.||+|+||+||+|++++++.||||+++.....+  ....+++..+++++|||||+++|+|.+++..++||||+++|++.
T Consensus        10 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~--~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~   87 (258)
T d1k2pa_          10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE--DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL   87 (258)
T ss_dssp             CCCCEETTEEEEEEEETTTEEEEEEEEESSSSCH--HHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHH
T ss_pred             EEEecCCCeEEEEEEECCCCEEEEEEECcCcCCH--HHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHH
Confidence            4589999999999999888899999987644332  34567788889999999999999999999999999999999999


Q ss_pred             HHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-Cccccc
Q 045493          862 TILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS-NWSELA  940 (1048)
Q Consensus       862 ~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~~~  940 (1048)
                      +++...  ...+++..+.+++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+|+....... ......
T Consensus        88 ~~~~~~--~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~  162 (258)
T d1k2pa_          88 NYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK  162 (258)
T ss_dssp             HHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSC
T ss_pred             Hhhhcc--ccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccC
Confidence            997643  34578999999999999999999999   999999999999999999999999999987654433 233467


Q ss_pred             cccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHHH
Q 045493          941 GTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKLK 1019 (1048)
Q Consensus       941 gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1019 (1048)
                      ||+.|+|||++.+..++.++|||||||++|||+| |+.||....           ..+....+..+...+..   .....
T Consensus       163 ~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~-----------~~~~~~~i~~~~~~~~p---~~~~~  228 (258)
T d1k2pa_         163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-----------NSETAEHIAQGLRLYRP---HLASE  228 (258)
T ss_dssp             CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----------HHHHHHHHHTTCCCCCC---TTCCH
T ss_pred             CCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCC-----------HHHHHHHHHhCCCCCCc---ccccH
Confidence            8999999999999999999999999999999998 899986432           11222223232222221   12335


Q ss_pred             HHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493         1020 SMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus      1020 ~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
                      ++.+++.+||+.||++||||+|+++.|.
T Consensus       229 ~l~~li~~cl~~dP~~RPt~~eil~~L~  256 (258)
T d1k2pa_         229 KVYTIMYSCWHEKADERPTFKILLSNIL  256 (258)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHhh
Confidence            6889999999999999999999999885


No 16 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.5e-46  Score=410.38  Aligned_cols=251  Identities=21%  Similarity=0.335  Sum_probs=195.7

Q ss_pred             eeeecccccccEEEEEEcCCC------ceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEE
Q 045493          781 MVLHGTGGCGTVYKAELTSGD------TRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYE  853 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~~~------~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e  853 (1048)
                      .+.||+|+||+||+|++....      .||||++.............+++..+.++ +|||||++++++.+.+..|+|||
T Consensus        42 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E  121 (325)
T d1rjba_          42 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE  121 (325)
T ss_dssp             EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEE
Confidence            456899999999999876322      58888886554444344455667777777 89999999999999999999999


Q ss_pred             ccCCCCHHHHHhcccc--------------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC
Q 045493          854 YLERGSLATILSNEAT--------------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD  913 (1048)
Q Consensus       854 ~~~~g~L~~~l~~~~~--------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~  913 (1048)
                      ||++|+|.++++....                    ...+++..++.++.||+.||+|||++   +||||||||+||+++
T Consensus       122 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp~Nill~  198 (325)
T d1rjba_         122 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVT  198 (325)
T ss_dssp             CCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEEE
T ss_pred             cCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCchhccccc
Confidence            9999999999975431                    23488999999999999999999999   999999999999999


Q ss_pred             CCCceEEeccccccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCc
Q 045493          914 LEYKAHVSDFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPA  990 (1048)
Q Consensus       914 ~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~  990 (1048)
                      .++.+||+|||+|+........  .....||+.|||||++.++.++.++|||||||++|||+| |+.||...+.      
T Consensus       199 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~------  272 (325)
T d1rjba_         199 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV------  272 (325)
T ss_dssp             TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC------
T ss_pred             cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH------
Confidence            9999999999999876554432  234568999999999999999999999999999999998 8999863221      


Q ss_pred             ccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493          991 PAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus       991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
                           ......++......+.  +.....++.+++.+||+.||++||||+||+++|.
T Consensus       273 -----~~~~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         273 -----DANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             -----SHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             -----HHHHHHHHhcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence                 1111222222211111  1123356889999999999999999999999984


No 17 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-46  Score=411.07  Aligned_cols=256  Identities=21%  Similarity=0.267  Sum_probs=194.5

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG  858 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  858 (1048)
                      ....||+|+||+||+|++. +++.||+|+++............+|+..+++++|||||+++++|.+.++.|+||||+++|
T Consensus        10 ~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg   89 (322)
T d1s9ja_          10 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG   89 (322)
T ss_dssp             EEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCC
Confidence            4456899999999999986 678899999876543333333455666678889999999999999999999999999999


Q ss_pred             CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCccc
Q 045493          859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSE  938 (1048)
Q Consensus       859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~  938 (1048)
                      +|.+++.+.+   .+++..+..++.|++.||.|||+++  +|+||||||+|||++.+|++||+|||+|+.+.+.  ....
T Consensus        90 ~L~~~l~~~~---~l~~~~~~~~~~qil~aL~yLH~~~--~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--~~~~  162 (322)
T d1s9ja_          90 SLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS  162 (322)
T ss_dssp             EHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--TC--
T ss_pred             cHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEccccCHHHeeECCCCCEEEeeCCCccccCCC--cccc
Confidence            9999997543   4899999999999999999999732  8999999999999999999999999999876432  2345


Q ss_pred             cccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCccccccc----------CCCc----c-c-----------
Q 045493          939 LAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL----------SLPA----P-A-----------  992 (1048)
Q Consensus       939 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~----------~~~~----~-~-----------  992 (1048)
                      .+||+.|||||++.+..|+.++||||+||++|||++|+.||...+...          +...    . .           
T Consensus       163 ~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (322)
T d1s9ja_         163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM  242 (322)
T ss_dssp             -CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------------
T ss_pred             ccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccc
Confidence            689999999999999999999999999999999999999986422100          0000    0 0           


Q ss_pred             -----ccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493          993 -----ANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus       993 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                           ...............+....  ...+.++.+++.+||+.||++||||+|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         243 DSRPPMAIFELLDYIVNEPPPKLPS--GVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             ---CCCCHHHHHHHHHTSCCCCCCB--TTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccchhHHHHHhhhhccCCccCcc--ccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                 00000000000100000000  112356889999999999999999999986


No 18 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-45  Score=396.52  Aligned_cols=245  Identities=24%  Similarity=0.320  Sum_probs=191.3

Q ss_pred             eeecccccccEEEEEEcC---CCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493          782 VLHGTGGCGTVYKAELTS---GDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER  857 (1048)
Q Consensus       782 ~~lG~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  857 (1048)
                      +.||+|+||+||+|.+..   ++.||||+++...... ......+|++.+++++|||||+++|+|.. +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            358999999999998653   3579999986543322 12234556777788999999999999965 457899999999


Q ss_pred             CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC--
Q 045493          858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN--  935 (1048)
Q Consensus       858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~--  935 (1048)
                      |+|.++++..   ..+++..+..++.||+.||+|||+.   +||||||||+|||++.++.+|++|||+|+.+......  
T Consensus        92 g~L~~~l~~~---~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~  165 (277)
T d1xbba_          92 GPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  165 (277)
T ss_dssp             EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred             CcHHHHHhhc---cCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhccccccccc
Confidence            9999999753   3489999999999999999999999   9999999999999999999999999999876544332  


Q ss_pred             -ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493          936 -WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus       936 -~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
                       .....||++|||||++.+..++.++|||||||++|||+| |+.||...+           .......+..+..++..  
T Consensus       166 ~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~-----------~~~~~~~i~~~~~~~~p--  232 (277)
T d1xbba_         166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----------GSEVTAMLEKGERMGCP--  232 (277)
T ss_dssp             C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-----------HHHHHHHHHTTCCCCCC--
T ss_pred             cccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCC-----------HHHHHHHHHcCCCCCCC--
Confidence             234568999999999999999999999999999999998 899986422           11222222222222221  


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493         1014 VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus      1014 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
                       .....++.+++.+||+.||++||||++|+++|+
T Consensus       233 -~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~  265 (277)
T d1xbba_         233 -AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR  265 (277)
T ss_dssp             -TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             -cccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence             123356888999999999999999999998875


No 19 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.3e-46  Score=400.36  Aligned_cols=243  Identities=21%  Similarity=0.306  Sum_probs=195.2

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE  856 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  856 (1048)
                      -.+.||+|+||+||+|+++ +++.||||++.....  ........++++.+++++|||||++++++.+.+..|+||||++
T Consensus        12 i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~   91 (288)
T d1uu3a_          12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK   91 (288)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccC
Confidence            3457899999999999986 688999999865321  1222334567777889999999999999999999999999999


Q ss_pred             CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC--
Q 045493          857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS--  934 (1048)
Q Consensus       857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~--  934 (1048)
                      +|+|.+++...+   .+++..++.++.|++.||+|||+.   +||||||||+||++++++.+||+|||+|+.+.....  
T Consensus        92 gg~L~~~~~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~  165 (288)
T d1uu3a_          92 NGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA  165 (288)
T ss_dssp             TEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             CCCHHHhhhccC---CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccCCccc
Confidence            999999987543   489999999999999999999999   999999999999999999999999999987754332  


Q ss_pred             CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493          935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus       935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
                      .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...+           .......+.......+    
T Consensus       166 ~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----------~~~~~~~i~~~~~~~p----  230 (288)
T d1uu3a_         166 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----------EYLIFQKIIKLEYDFP----  230 (288)
T ss_dssp             ----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHTTCCCCC----
T ss_pred             ccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcC-----------HHHHHHHHHcCCCCCC----
Confidence            2345689999999999999999999999999999999999999986322           1222233333332222    


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 045493         1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVC 1043 (1048)
Q Consensus      1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl 1043 (1048)
                      .....++.+++.+||+.||++|||++|++
T Consensus       231 ~~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         231 EKFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             TTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             ccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence            12234678999999999999999999864


No 20 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.5e-45  Score=395.47  Aligned_cols=249  Identities=19%  Similarity=0.227  Sum_probs=202.9

Q ss_pred             CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-----cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEE
Q 045493          778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-----GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLV  851 (1048)
Q Consensus       778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-----~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv  851 (1048)
                      +...+.||+|+||+||+|+++ +|+.||||++........     .....+|++.+++++|||||++++++.+.+..|+|
T Consensus        12 Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (293)
T d1jksa_          12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI   91 (293)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            444567999999999999985 688999999875433221     12345667778899999999999999999999999


Q ss_pred             EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC----ceEEecccccc
Q 045493          852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY----KAHVSDFGTAK  927 (1048)
Q Consensus       852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~----~~kl~DfG~a~  927 (1048)
                      ||||++|+|.+++...+   .+++..++.++.|++.||+|||+.   +|+||||||+||+++.++    .+|++|||+|+
T Consensus        92 ~E~~~gg~L~~~i~~~~---~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~  165 (293)
T d1jksa_          92 LELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  165 (293)
T ss_dssp             EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEcCCCccccchhcccc---ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhhh
Confidence            99999999999997543   489999999999999999999999   999999999999998876    59999999998


Q ss_pred             ccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCC
Q 045493          928 FLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRL 1007 (1048)
Q Consensus       928 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1048)
                      ..... .......||+.|||||++.+..++.++||||+||++|||++|+.||...+           .......+.....
T Consensus       166 ~~~~~-~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----------~~~~~~~i~~~~~  233 (293)
T d1jksa_         166 KIDFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----------KQETLANVSAVNY  233 (293)
T ss_dssp             ECTTS-CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHTTCC
T ss_pred             hcCCC-ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCC-----------HHHHHHHHHhcCC
Confidence            76543 33445679999999999999999999999999999999999999986322           2222333333333


Q ss_pred             CCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1008 PPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1008 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      ..+.......+..+.+++.+||+.||++|||++|+++
T Consensus       234 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         234 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            3333333344567889999999999999999999986


No 21 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=2.4e-45  Score=399.46  Aligned_cols=244  Identities=22%  Similarity=0.328  Sum_probs=194.8

Q ss_pred             CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc--cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493          778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI--GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY  854 (1048)
Q Consensus       778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  854 (1048)
                      +...+.||+|+||+||+|++. +++.||||++........  .....+|+..+++++|||||++++++.+.+..|+||||
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   96 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence            445567999999999999876 678899999875443221  12234567778899999999999999999999999999


Q ss_pred             cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493          855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS  934 (1048)
Q Consensus       855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~  934 (1048)
                      |++|++..++...   ..+++..++.++.||+.||+|||++   +||||||||+|||++.++.+||+|||+|+.....  
T Consensus        97 ~~~g~l~~~~~~~---~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~--  168 (309)
T d1u5ra_          97 CLGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--  168 (309)
T ss_dssp             CSEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred             cCCCchHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCCC--
Confidence            9999998776543   3489999999999999999999999   9999999999999999999999999999865432  


Q ss_pred             Ccccccccccccccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCc
Q 045493          935 NWSELAGTCGYIAPELAYT---MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPL 1011 (1048)
Q Consensus       935 ~~~~~~gt~~y~aPE~~~~---~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1048)
                        ...+||+.|||||++.+   +.|+.++||||+||++|||++|+.||....           .......+.....+...
T Consensus       169 --~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~-----------~~~~~~~i~~~~~~~~~  235 (309)
T d1u5ra_         169 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----------AMSALYHIAQNESPALQ  235 (309)
T ss_dssp             --CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHHHHHHSCCCCCS
T ss_pred             --CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHhCCCCCCC
Confidence              34579999999999864   458999999999999999999999986322           11122222222222211


Q ss_pred             hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1012 GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1012 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      .  ......+.+++.+||+.||++||||+|+++
T Consensus       236 ~--~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         236 S--GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             C--TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             C--CCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            1  122346888999999999999999999976


No 22 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=6.4e-45  Score=403.06  Aligned_cols=248  Identities=18%  Similarity=0.269  Sum_probs=201.8

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCC
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERG  858 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  858 (1048)
                      -.+.||+|+||+||+|++. +|+.||||++....... .....+|++.+++++|||||++++++.+.+..|+|||||++|
T Consensus        30 i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~-~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg  108 (350)
T d1koaa2          30 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD-KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG  108 (350)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHH-HHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhh-HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCC
Confidence            3456999999999999886 68899999986543222 233456777788999999999999999999999999999999


Q ss_pred             CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC--CCceEEeccccccccCCCCCCc
Q 045493          859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL--EYKAHVSDFGTAKFLKPDSSNW  936 (1048)
Q Consensus       859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~--~~~~kl~DfG~a~~~~~~~~~~  936 (1048)
                      +|.+++.+.  ...+++..+..++.||+.||+|||+.   +||||||||+|||++.  ++.+||+|||+|+.+... ...
T Consensus       109 ~L~~~l~~~--~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~-~~~  182 (350)
T d1koaa2         109 ELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSV  182 (350)
T ss_dssp             BHHHHHTCT--TSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT-SCE
T ss_pred             CHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheecccc-ccc
Confidence            999999543  23489999999999999999999999   9999999999999964  588999999999876543 334


Q ss_pred             cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493          937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus       937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
                      ....||+.|||||++.+..|+.++||||+||++|||++|+.||...+           .......+.......+......
T Consensus       183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-----------~~~~~~~i~~~~~~~~~~~~~~  251 (350)
T d1koaa2         183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-----------DDETLRNVKSCDWNMDDSAFSG  251 (350)
T ss_dssp             EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHTCCCSCCGGGGG
T ss_pred             ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCCcccccC
Confidence            55789999999999999999999999999999999999999986322           1222333333333322222333


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493         1017 KLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus      1017 ~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
                      ...++.+++.+||+.||++|||++|+++.
T Consensus       252 ~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         252 ISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            45578899999999999999999999873


No 23 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.6e-45  Score=390.27  Aligned_cols=248  Identities=23%  Similarity=0.329  Sum_probs=192.1

Q ss_pred             eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCCH
Q 045493          781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGSL  860 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  860 (1048)
                      .+.||+|+||.||+|+++++++||||+++.....  .....+++..+++++|||||+++|+|.+ +..++||||+++|++
T Consensus        22 ~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~~g~l   98 (285)
T d1fmka3          22 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL   98 (285)
T ss_dssp             EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBH
T ss_pred             eeEEeeCCCeEEEEEEECCCCEEEEEEECcccCC--HHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecCCCch
Confidence            4458999999999999998889999998654332  2345667777889999999999999965 457899999999999


Q ss_pred             HHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-Ccccc
Q 045493          861 ATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS-NWSEL  939 (1048)
Q Consensus       861 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~~  939 (1048)
                      .+++.... ...++|.++..++.||+.||+|||+.   +|+||||||+|||++.++++||+|||+|+....... .....
T Consensus        99 ~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~  174 (285)
T d1fmka3          99 LDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA  174 (285)
T ss_dssp             HHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred             hhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCCceeeccc
Confidence            99986543 23489999999999999999999999   999999999999999999999999999987654332 23446


Q ss_pred             ccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHHH
Q 045493          940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKLK 1019 (1048)
Q Consensus       940 ~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1019 (1048)
                      .||+.|+|||++..+.++.++|||||||++|||+||..|+...          .........+......+..   ....+
T Consensus       175 ~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~----------~~~~~~~~~i~~~~~~~~~---~~~~~  241 (285)
T d1fmka3         175 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG----------MVNREVLDQVERGYRMPCP---PECPE  241 (285)
T ss_dssp             -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT----------CCHHHHHHHHHTTCCCCCC---TTSCH
T ss_pred             cccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCC----------CCHHHHHHHHHhcCCCCCC---cccCH
Confidence            7899999999999999999999999999999999977664321          1112222222222222211   22345


Q ss_pred             HHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493         1020 SMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus      1020 ~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      ++.+++.+||+.||++||||++|+++|+.
T Consensus       242 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~  270 (285)
T d1fmka3         242 SLHDLMCQCWRKEPEERPTFEYLQAFLED  270 (285)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHHHHHHHcccCHhHCcCHHHHHHHHhh
Confidence            68899999999999999999999998863


No 24 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=1e-44  Score=401.79  Aligned_cols=249  Identities=18%  Similarity=0.223  Sum_probs=201.9

Q ss_pred             CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493          778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE  856 (1048)
Q Consensus       778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  856 (1048)
                      +...+.||+|+||+||+|++. +++.||||++......+ .....+|+..+++++|||||++++++.+.+..|+|||||+
T Consensus        31 Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  109 (352)
T d1koba_          31 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD-KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS  109 (352)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH-HHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhH-HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            344567999999999999885 68999999986543222 2234567777899999999999999999999999999999


Q ss_pred             CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEEC--CCCceEEeccccccccCCCCC
Q 045493          857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLD--LEYKAHVSDFGTAKFLKPDSS  934 (1048)
Q Consensus       857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~--~~~~~kl~DfG~a~~~~~~~~  934 (1048)
                      +|+|.+++...  ...+++.+++.++.||+.||+|||+.   +||||||||+|||++  .++.+||+|||+|+.+... .
T Consensus       110 gg~L~~~~~~~--~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~-~  183 (352)
T d1koba_         110 GGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-E  183 (352)
T ss_dssp             CCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT-S
T ss_pred             CChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecCCC-C
Confidence            99999987543  33489999999999999999999999   999999999999998  5789999999999987643 3


Q ss_pred             CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493          935 NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus       935 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
                      ......||+.|||||++.+..|+.++||||+||++|||+||+.||....           .......+.......+....
T Consensus       184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----------~~~~~~~i~~~~~~~~~~~~  252 (352)
T d1koba_         184 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED-----------DLETLQNVKRCDWEFDEDAF  252 (352)
T ss_dssp             CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-----------HHHHHHHHHHCCCCCCSSTT
T ss_pred             ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCCcccc
Confidence            3455689999999999999999999999999999999999999986322           11222333333332222222


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      .....++.+++.+||++||++|||++|+++
T Consensus       253 ~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         253 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            334456889999999999999999999986


No 25 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-44  Score=397.27  Aligned_cols=244  Identities=21%  Similarity=0.238  Sum_probs=201.3

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE  856 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  856 (1048)
                      ..+.||+|+||.||+|+.+ +++.||||++.+...  .........|+..++.++|||||++++++.+.+..|+||||++
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~   88 (337)
T d1o6la_           9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN   88 (337)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccC
Confidence            3457899999999999885 789999999875321  1122234556777889999999999999999999999999999


Q ss_pred             CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493          857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW  936 (1048)
Q Consensus       857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~  936 (1048)
                      +|+|.+++.+.+   .+++..++.++.|++.||+|||+.   +||||||||+|||++.+|.+||+|||+|+.........
T Consensus        89 gg~L~~~~~~~~---~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~  162 (337)
T d1o6la_          89 GGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM  162 (337)
T ss_dssp             TCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred             CCchhhhhhccc---CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccccCCccc
Confidence            999999997644   378899999999999999999999   99999999999999999999999999999776655666


Q ss_pred             cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493          937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus       937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
                      ...+||+.|||||++.+..|+.++||||+||++|||++|+.||...+           .......+.......+.    .
T Consensus       163 ~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~-----------~~~~~~~i~~~~~~~p~----~  227 (337)
T d1o6la_         163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----------HERLFELILMEEIRFPR----T  227 (337)
T ss_dssp             CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCT----T
T ss_pred             ccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcC-----------HHHHHHHHhcCCCCCCc----c
Confidence            67899999999999999999999999999999999999999986432           12223333333333221    2


Q ss_pred             HHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 045493         1017 KLKSMIAVAFLCLDANPDCRPT-----MQKVCN 1044 (1048)
Q Consensus      1017 ~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 1044 (1048)
                      .+.++.+++.+||++||++||+     ++|+++
T Consensus       228 ~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            3345788999999999999995     788875


No 26 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=6.7e-45  Score=397.01  Aligned_cols=253  Identities=21%  Similarity=0.343  Sum_probs=201.9

Q ss_pred             cceeeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEE
Q 045493          779 GKMVLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVY  852 (1048)
Q Consensus       779 ~~~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~  852 (1048)
                      .-.+.||+|+||+||+|+++      +++.||||+++.....+......+++..+++++||||++++++|...+..++||
T Consensus        16 ~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~   95 (301)
T d1lufa_          16 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLF   95 (301)
T ss_dssp             EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEE
Confidence            33456899999999999875      246799999876544443344566777889999999999999999999999999


Q ss_pred             EccCCCCHHHHHhccc---------------------cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeE
Q 045493          853 EYLERGSLATILSNEA---------------------TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVL  911 (1048)
Q Consensus       853 e~~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIl  911 (1048)
                      ||+++|+|.++++...                     ....+++..+..++.|++.||+|||+.   +||||||||+|||
T Consensus        96 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDlKp~NIL  172 (301)
T d1lufa_          96 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCL  172 (301)
T ss_dssp             ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEEcccceE
Confidence            9999999999996432                     123488999999999999999999999   9999999999999


Q ss_pred             ECCCCceEEeccccccccCCCCC--CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCC-CCCcccccccCC
Q 045493          912 LDLEYKAHVSDFGTAKFLKPDSS--NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGK-HPGHFLSLLLSL  988 (1048)
Q Consensus       912 l~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~-~p~~~~~~~~~~  988 (1048)
                      ++.++.+||+|||+|+...+...  ......||+.|+|||++.+..|+.++|||||||++|||++|. .||...      
T Consensus       173 ld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~------  246 (301)
T d1lufa_         173 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM------  246 (301)
T ss_dssp             ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS------
T ss_pred             ECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCC------
Confidence            99999999999999987644322  223467899999999999999999999999999999999986 455422      


Q ss_pred             CcccccchhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493          989 PAPAANMNIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus       989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                           ...+....+.++..++...   ....++.+++.+||+.||++||||.||+++|+|
T Consensus       247 -----~~~e~~~~v~~~~~~~~p~---~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~  298 (301)
T d1lufa_         247 -----AHEEVIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQR  298 (301)
T ss_dssp             -----CHHHHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -----CHHHHHHHHHcCCCCCCCc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence                 2223334444444433222   233468899999999999999999999999974


No 27 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-44  Score=383.62  Aligned_cols=243  Identities=24%  Similarity=0.348  Sum_probs=188.4

Q ss_pred             eeeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee-CCeEEEEEEccCCCC
Q 045493          781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH-TQHLFLVYEYLERGS  859 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~g~  859 (1048)
                      .+.||+|+||.||+|+++ +++||||+++....   .....+++..+++++||||++++|+|.+ .+..|+||||+++|+
T Consensus        12 ~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~~---~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~   87 (262)
T d1byga_          12 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT---AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS   87 (262)
T ss_dssp             EEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEE
T ss_pred             eEEEecCCCeEEEEEEEC-CeEEEEEEECcHHH---HHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCC
Confidence            345899999999999986 78899999965332   2345677888899999999999999855 466899999999999


Q ss_pred             HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcccc
Q 045493          860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWSEL  939 (1048)
Q Consensus       860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~  939 (1048)
                      |.+++.... ...+++..+++|+.||+.||+|||+.   +|+||||||+||+++.++.+|++|||+++.....   ....
T Consensus        88 L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~---~~~~  160 (262)
T d1byga_          88 LVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---QDTG  160 (262)
T ss_dssp             HHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--------------
T ss_pred             HHHHHHhcC-CCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCC---Cccc
Confidence            999996542 23489999999999999999999999   9999999999999999999999999999865432   2345


Q ss_pred             ccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHHH
Q 045493          940 AGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEKL 1018 (1048)
Q Consensus       940 ~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1048)
                      .+|+.|+|||++.++.++.++|||||||++|||+| |+.||....           .......+..+..++...   ...
T Consensus       161 ~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~-----------~~~~~~~i~~~~~~~~~~---~~~  226 (262)
T d1byga_         161 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----------LKDVVPRVEKGYKMDAPD---GCP  226 (262)
T ss_dssp             -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----------GGGHHHHHTTTCCCCCCT---TCC
T ss_pred             cccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCC-----------HHHHHHHHHcCCCCCCCc---cCC
Confidence            68899999999999999999999999999999998 677765321           112222222222222211   223


Q ss_pred             HHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493         1019 KSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus      1019 ~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      .++.+++.+||+.||++||||+|++++|++
T Consensus       227 ~~~~~li~~cl~~dP~~Rps~~~l~~~L~~  256 (262)
T d1byga_         227 PAVYEVMKNCWHLDAAMRPSFLQLREQLEH  256 (262)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            467889999999999999999999999873


No 28 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=6.9e-44  Score=381.89  Aligned_cols=248  Identities=19%  Similarity=0.320  Sum_probs=199.4

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccc--------hhhHHHHHHhhcc-cCceeeEeeEeeeCCeEE
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGI--------NQKGFVSEITEIR-HRNIVKFYGFCSHTQHLF  849 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~--------~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~  849 (1048)
                      ..+.||+|+||+||+|+.. +++.||||++..........        ...+|+..+++++ |||||++++++.+++..|
T Consensus         7 ~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~   86 (277)
T d1phka_           7 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF   86 (277)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             EceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceE
Confidence            3456899999999999885 68899999987654332211        2234566667776 999999999999999999


Q ss_pred             EEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccccccc
Q 045493          850 LVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL  929 (1048)
Q Consensus       850 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~  929 (1048)
                      +||||+++|+|.++++..+   .+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||+++.+
T Consensus        87 ivmE~~~~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~  160 (277)
T d1phka_          87 LVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL  160 (277)
T ss_dssp             EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEcCCCchHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchheeEc
Confidence            9999999999999997543   489999999999999999999999   9999999999999999999999999999987


Q ss_pred             CCCCCCcccccccccccccccccc------CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhc
Q 045493          930 KPDSSNWSELAGTCGYIAPELAYT------MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLI 1003 (1048)
Q Consensus       930 ~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1048)
                      .... .....+||+.|+|||++.+      ..++.++||||+||++|||++|+.||....           .......+.
T Consensus       161 ~~~~-~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~-----------~~~~~~~i~  228 (277)
T d1phka_         161 DPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-----------QMLMLRMIM  228 (277)
T ss_dssp             CTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHH
T ss_pred             cCCC-ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCC-----------HHHHHHHHH
Confidence            6533 3455789999999998853      346889999999999999999999986322           122223333


Q ss_pred             cCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493         1004 DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus      1004 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
                      ......+.......++++.+++.+||++||++|||++|+++.
T Consensus       229 ~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         229 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             HTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             hCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            333332222233455678899999999999999999999874


No 29 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.5e-44  Score=389.13  Aligned_cols=260  Identities=22%  Similarity=0.314  Sum_probs=192.9

Q ss_pred             eeecccccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC----eEEEEEEccCC
Q 045493          782 VLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ----HLFLVYEYLER  857 (1048)
Q Consensus       782 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~  857 (1048)
                      +.||+|+||+||+|++. |+.||||++.....  .....+.++..+..++|||||+++++|.+.+    ..|+|||||++
T Consensus         9 ~~iG~G~fg~Vy~~~~~-g~~vAvK~~~~~~~--~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~   85 (303)
T d1vjya_           9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH   85 (303)
T ss_dssp             EEEECCSSSEEEEEEET-TEEEEEEEECGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred             EEEeeCCCeEEEEEEEC-CEEEEEEEECccch--hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccC
Confidence            35899999999999874 88999999864321  1122233344446779999999999997643    68999999999


Q ss_pred             CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493          858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDC-----FPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD  932 (1048)
Q Consensus       858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~  932 (1048)
                      |+|.+++++.    .++|..+.+++.|+|.|++|+|+..     .++||||||||+|||++.++.+||+|||+++.....
T Consensus        86 g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~  161 (303)
T d1vjya_          86 GSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA  161 (303)
T ss_dssp             CBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             CCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCC
Confidence            9999999753    3899999999999999999999731     249999999999999999999999999999877544


Q ss_pred             CC----CccccccccccccccccccCC------CCchhhHHHHHHHHHHHHhCCCCCcccccccCCC----cccccchhh
Q 045493          933 SS----NWSELAGTCGYIAPELAYTMR------ANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLP----APAANMNIV  998 (1048)
Q Consensus       933 ~~----~~~~~~gt~~y~aPE~~~~~~------~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~----~~~~~~~~~  998 (1048)
                      ..    ......||++|||||++.+..      ++.++|||||||++|||+||+.||..........    .........
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (303)
T d1vjya_         162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM  241 (303)
T ss_dssp             TTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHH
T ss_pred             CcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHH
Confidence            32    233567999999999987543      5779999999999999999998875433211110    011111222


Q ss_pred             hhhhccCCCCCCc-h--hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493          999 VNDLIDSRLPPPL-G--EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus       999 ~~~~~~~~~~~~~-~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      ..........+.. .  ...+....+.+++.+||+.||++||||.||++.|++
T Consensus       242 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~  294 (303)
T d1vjya_         242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             HHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            2222232322211 1  123455679999999999999999999999999864


No 30 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.1e-44  Score=388.18  Aligned_cols=249  Identities=20%  Similarity=0.293  Sum_probs=194.9

Q ss_pred             eeecccccccEEEEEEcCC----CceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee-CCeEEEEEEccC
Q 045493          782 VLHGTGGCGTVYKAELTSG----DTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH-TQHLFLVYEYLE  856 (1048)
Q Consensus       782 ~~lG~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~  856 (1048)
                      ++||+|+||+||+|++..+    ..||||+++............++++.+++++|||||+++|++.+ ++..++|||||+
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~  112 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK  112 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence            4689999999999987542    24789998654433333445667777889999999999999865 568999999999


Q ss_pred             CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC-
Q 045493          857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN-  935 (1048)
Q Consensus       857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~-  935 (1048)
                      +|+|.+++...  ....++..+.+++.|+++||.|+|+.   +|+||||||+|||+++++.+||+|||+++........ 
T Consensus       113 ~g~l~~~~~~~--~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~  187 (311)
T d1r0pa_         113 HGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS  187 (311)
T ss_dssp             TCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCC
T ss_pred             cCchhhhhccc--cccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhcccccccc
Confidence            99999998653  33467888999999999999999999   9999999999999999999999999999876543222 


Q ss_pred             ---ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493          936 ---WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus       936 ---~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
                         .....||+.|+|||.+.+..++.++||||||+++|||+||+.||.....          .......+..+..+....
T Consensus       188 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~----------~~~~~~~i~~g~~~~~p~  257 (311)
T d1r0pa_         188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------TFDITVYLLQGRRLLQPE  257 (311)
T ss_dssp             TTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------------CHHHHHTTCCCCCCT
T ss_pred             ceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCC----------HHHHHHHHHcCCCCCCcc
Confidence               2345689999999999999999999999999999999998888652211          111122222222222211


Q ss_pred             hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493         1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus      1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                         .....+.+++.+||+.||++||||.||+++|++
T Consensus       258 ---~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~  290 (311)
T d1r0pa_         258 ---YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA  290 (311)
T ss_dssp             ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---cCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence               223468899999999999999999999999863


No 31 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.2e-44  Score=384.31  Aligned_cols=247  Identities=21%  Similarity=0.298  Sum_probs=185.5

Q ss_pred             eeeecccccccEEEEEEcC----CCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493          781 MVLHGTGGCGTVYKAELTS----GDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLE  856 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  856 (1048)
                      .+.||+|+||.||+|++..    +..||||+++............+++..+++++|||||+++|++.+ +..|+||||++
T Consensus        12 ~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~iv~E~~~   90 (273)
T d1mp8a_          12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCT   90 (273)
T ss_dssp             EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred             EEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CeEEEEEEecc
Confidence            4568999999999998753    235778887654443333345567777889999999999999964 66899999999


Q ss_pred             CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC-C
Q 045493          857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS-N  935 (1048)
Q Consensus       857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~  935 (1048)
                      +|++.+++...  ...+++..++.++.||++||+|||+.   +||||||||+||+++.++.+||+|||+|+....... .
T Consensus        91 ~g~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~  165 (273)
T d1mp8a_          91 LGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK  165 (273)
T ss_dssp             TEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------------
T ss_pred             CCcHHhhhhcc--CCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheeccCCccee
Confidence            99999987543  33589999999999999999999999   999999999999999999999999999987654332 2


Q ss_pred             ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhH
Q 045493          936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEV 1014 (1048)
Q Consensus       936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1048)
                      .....||+.|+|||++.+..++.++|||||||++|||+| |+.||...+.           ......+..+..++...  
T Consensus       166 ~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~-----------~~~~~~i~~~~~~~~~~--  232 (273)
T d1mp8a_         166 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----------NDVIGRIENGERLPMPP--  232 (273)
T ss_dssp             -----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----------GGHHHHHHTTCCCCCCT--
T ss_pred             ccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCH-----------HHHHHHHHcCCCCCCCC--
Confidence            344568999999999999999999999999999999998 8888764321           12223333333222221  


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493         1015 EEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus      1015 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
                       ....++.+++.+||+.||++||||+|+++.|+
T Consensus       233 -~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~  264 (273)
T d1mp8a_         233 -NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS  264 (273)
T ss_dssp             -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             -CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence             23356889999999999999999999999886


No 32 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-43  Score=390.49  Aligned_cols=245  Identities=20%  Similarity=0.248  Sum_probs=193.1

Q ss_pred             eeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHh-hcccCceeeEeeEeee----CCeEEEEEEcc
Q 045493          782 VLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEIT-EIRHRNIVKFYGFCSH----TQHLFLVYEYL  855 (1048)
Q Consensus       782 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~-~l~h~niv~~~~~~~~----~~~~~lv~e~~  855 (1048)
                      ++||+|+||+||+|++. +++.||||++...      ....+++..+. ..+|||||+++++|.+    ....|+|||||
T Consensus        18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~   91 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL   91 (335)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred             EEeeeccCeEEEEEEECCCCCEEEEEEECCc------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECC
Confidence            46899999999999875 6889999998542      22344555544 4589999999999865    46789999999


Q ss_pred             CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC---CCceEEeccccccccCCC
Q 045493          856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL---EYKAHVSDFGTAKFLKPD  932 (1048)
Q Consensus       856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~---~~~~kl~DfG~a~~~~~~  932 (1048)
                      +||+|.+++...+ ...+++.+++.++.||+.||+|||+.   +|+||||||+|||++.   ++.+||+|||+|+.....
T Consensus        92 ~gg~L~~~i~~~~-~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~  167 (335)
T d2ozaa1          92 DGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  167 (335)
T ss_dssp             CSEEHHHHHHSCS-CCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCC
T ss_pred             CCCcHHHHHHhcC-CCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccceeeeccCC
Confidence            9999999997543 24589999999999999999999999   9999999999999985   467999999999876543


Q ss_pred             CCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCch
Q 045493          933 SSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLG 1012 (1048)
Q Consensus       933 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1048)
                       ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.........       ......+.......+..
T Consensus       168 -~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~-------~~~~~~i~~~~~~~~~~  239 (335)
T d2ozaa1         168 -NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------PGMKTRIRMGQYEFPNP  239 (335)
T ss_dssp             -CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------------CCCSCSSSCCTT
T ss_pred             -CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH-------HHHHHHHhcCCCCCCCc
Confidence             3345568999999999999999999999999999999999999998744321111       11111222222222223


Q ss_pred             hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1013 EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1013 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      .......++.+++.+||+.||++|||+.|+++
T Consensus       240 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         240 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            33455677999999999999999999999987


No 33 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.9e-44  Score=391.26  Aligned_cols=249  Identities=19%  Similarity=0.322  Sum_probs=191.7

Q ss_pred             cceeeecccccccEEEEEEc-CCC----ceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEE
Q 045493          779 GKMVLHGTGGCGTVYKAELT-SGD----TRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYE  853 (1048)
Q Consensus       779 ~~~~~lG~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  853 (1048)
                      ...+.||+|+||+||+|.+. +++    +||+|+++.....+......+++..+++++|||||+++|+|.+. ..+++||
T Consensus        12 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e   90 (317)
T d1xkka_          12 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQ   90 (317)
T ss_dssp             EEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEE
T ss_pred             EEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEE
Confidence            34567999999999999876 344    47888876544444334456677778899999999999999865 5678899


Q ss_pred             ccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCC
Q 045493          854 YLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDS  933 (1048)
Q Consensus       854 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~  933 (1048)
                      |+.+|+|.+++...  ...+++..+++++.|||.||+|||++   +||||||||+||+++.++.+||+|||+|+......
T Consensus        91 ~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          91 LMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             CCTTCBHHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred             eccCCccccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence            99999999988653  34589999999999999999999999   99999999999999999999999999999876543


Q ss_pred             CC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCC
Q 045493          934 SN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP 1010 (1048)
Q Consensus       934 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1048)
                      ..  .....||+.|||||++.++.++.++|||||||++|||+| |+.||+..+           .......+..+..++.
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~-----------~~~~~~~i~~~~~~~~  234 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----------ASEISSILEKGERLPQ  234 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----------GGGHHHHHHHTCCCCC
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC-----------HHHHHHHHHcCCCCCC
Confidence            32  234568999999999999999999999999999999999 788876322           1112222222222221


Q ss_pred             chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493         1011 LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus      1011 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
                      .   ......+.+++.+||+.||++||||+|+++.|+
T Consensus       235 p---~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~  268 (317)
T d1xkka_         235 P---PICTIDVYMIMVKCWMIDADSRPKFRELIIEFS  268 (317)
T ss_dssp             C---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             C---cccCHHHHHHHHHhCCCChhhCcCHHHHHHHHH
Confidence            1   123356888999999999999999999998875


No 34 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.9e-44  Score=390.56  Aligned_cols=259  Identities=22%  Similarity=0.228  Sum_probs=194.0

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc----ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE----IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY  854 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  854 (1048)
                      +.++||+|+||+||+|+++ +++.||||++.......    ......+|+..+++++|||||++++++.+.+..|+||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            4567999999999999986 68899999986543322    123345677788999999999999999999999999999


Q ss_pred             cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493          855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS  934 (1048)
Q Consensus       855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~  934 (1048)
                      ++++++..+...   ...+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|+.......
T Consensus        82 ~~~~~~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~  155 (299)
T d1ua2a_          82 METDLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR  155 (299)
T ss_dssp             CSEEHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred             hcchHHhhhhhc---ccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCcc
Confidence            999887776643   33478889999999999999999999   999999999999999999999999999988766555


Q ss_pred             CccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCcccccc-h-hhhhhh
Q 045493          935 NWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAANM-N-IVVNDL 1002 (1048)
Q Consensus       935 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~~-~-~~~~~~ 1002 (1048)
                      .....+||+.|||||++.+. .|+.++||||+||++|||++|+.||.......         +.+...... . ......
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~  235 (299)
T d1ua2a_         156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV  235 (299)
T ss_dssp             CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred             cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhh
Confidence            55667899999999998654 57999999999999999999999986433210         000000000 0 000000


Q ss_pred             ccCCCCCCc-h-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1003 IDSRLPPPL-G-EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1003 ~~~~~~~~~-~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      .....+... . .......++.+++.+||+.||++||||+|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            000111100 0 00122456889999999999999999999986


No 35 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.3e-43  Score=387.51  Aligned_cols=240  Identities=24%  Similarity=0.317  Sum_probs=196.3

Q ss_pred             eeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493          781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER  857 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  857 (1048)
                      .+.||+|+||+||+|+++ +|+.||||+++....  ........+++..++.++|||||++++++.+.+..|+||||++|
T Consensus         9 ~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g   88 (316)
T d1fota_           9 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG   88 (316)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCC
Confidence            456899999999999985 688999999865321  12223345667778899999999999999999999999999999


Q ss_pred             CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493          858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS  937 (1048)
Q Consensus       858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  937 (1048)
                      |++.+++....   .+++..+..++.||+.|++|||++   +||||||||+|||++.+|.+||+|||+|+.....   ..
T Consensus        89 g~l~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~---~~  159 (316)
T d1fota_          89 GELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---TY  159 (316)
T ss_dssp             CBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---BC
T ss_pred             ccccccccccc---cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEeccc---cc
Confidence            99999987543   377888999999999999999999   9999999999999999999999999999876532   34


Q ss_pred             ccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493          938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus       938 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
                      ..+||+.|||||++.+..|+.++||||+||++|||++|+.||...+           .......+.......+.    ..
T Consensus       160 ~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~-----------~~~~~~~i~~~~~~~p~----~~  224 (316)
T d1fota_         160 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-----------TMKTYEKILNAELRFPP----FF  224 (316)
T ss_dssp             CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----------HHHHHHHHHHCCCCCCT----TS
T ss_pred             cccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcC-----------HHHHHHHHHcCCCCCCC----CC
Confidence            5789999999999999999999999999999999999999986322           12223333333332221    12


Q ss_pred             HHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 045493         1018 LKSMIAVAFLCLDANPDCRP-----TMQKVCN 1044 (1048)
Q Consensus      1018 ~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 1044 (1048)
                      ..++.+++.+||++||++||     |++|+++
T Consensus       225 s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         225 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            34578899999999999996     8999875


No 36 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-43  Score=387.60  Aligned_cols=250  Identities=21%  Similarity=0.326  Sum_probs=195.0

Q ss_pred             eeeecccccccEEEEEEcCC-C--ceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEEccC
Q 045493          781 MVLHGTGGCGTVYKAELTSG-D--TRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYEYLE  856 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~~-~--~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~  856 (1048)
                      .+.||+|+||+||+|+++.+ .  .||||++......+......++++.++++ +|||||+++|+|.+.+..++||||++
T Consensus        15 ~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~   94 (309)
T d1fvra_          15 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   94 (309)
T ss_dssp             EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             EEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecC
Confidence            35699999999999988643 3  46788876554444444566778888888 79999999999999999999999999


Q ss_pred             CCCHHHHHhcc-------------ccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecc
Q 045493          857 RGSLATILSNE-------------ATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDF  923 (1048)
Q Consensus       857 ~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~Df  923 (1048)
                      +|+|.++++..             .....+++..+.+++.|||+|+.|+|+.   +|+||||||+|||++.++.+||+||
T Consensus        95 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~kl~Df  171 (309)
T d1fvra_          95 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF  171 (309)
T ss_dssp             TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCT
T ss_pred             CCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCceEEccc
Confidence            99999999653             2335689999999999999999999999   9999999999999999999999999


Q ss_pred             ccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCC-CCcccccccCCCcccccchhhhhhh
Q 045493          924 GTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKH-PGHFLSLLLSLPAPAANMNIVVNDL 1002 (1048)
Q Consensus       924 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1048)
                      |+|+...... ......||..|+|||.+.++.++.++|||||||++|||++|.. ||...+           .......+
T Consensus       172 G~a~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~-----------~~~~~~~i  239 (309)
T d1fvra_         172 GLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----------CAELYEKL  239 (309)
T ss_dssp             TCEESSCEEC-CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------HHHHHHHG
T ss_pred             cccccccccc-cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC-----------HHHHHHHH
Confidence            9998654322 2234568999999999999999999999999999999999765 554221           22223333


Q ss_pred             ccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493         1003 IDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus      1003 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      ..+..++...   ....++.+++.+||+.||++||||+||++.|++
T Consensus       240 ~~~~~~~~~~---~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~  282 (309)
T d1fvra_         240 PQGYRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  282 (309)
T ss_dssp             GGTCCCCCCT---TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HhcCCCCCCc---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            3332222221   233468889999999999999999999998864


No 37 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.7e-44  Score=390.52  Aligned_cols=243  Identities=22%  Similarity=0.288  Sum_probs=194.9

Q ss_pred             eeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHH-hhcccCceeeEeeEeeeCCeEEEEEEccC
Q 045493          781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEI-TEIRHRNIVKFYGFCSHTQHLFLVYEYLE  856 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~  856 (1048)
                      .+.||+|+||+||+|+++ +++.||||++++...  .+.......+...+ ..++|||||++++++.+++..|+||||++
T Consensus         7 ~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~   86 (320)
T d1xjda_           7 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN   86 (320)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             eeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecC
Confidence            456899999999999886 688999999965321  11111122223333 46799999999999999999999999999


Q ss_pred             CCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCc
Q 045493          857 RGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNW  936 (1048)
Q Consensus       857 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~  936 (1048)
                      +|+|.++++...   .+++.++..++.||+.||+|||++   +|+||||||+|||+++++++||+|||+|+.........
T Consensus        87 ~g~L~~~i~~~~---~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~  160 (320)
T d1xjda_          87 GGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT  160 (320)
T ss_dssp             TCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred             CCcHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhcccccccc
Confidence            999999997543   378899999999999999999999   99999999999999999999999999998776666666


Q ss_pred             cccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHH
Q 045493          937 SELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEE 1016 (1048)
Q Consensus       937 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1048)
                      ....||+.|+|||++.+..|+.++||||+||++|||++|+.||...+.           ......+.......+    ..
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~-----------~~~~~~i~~~~~~~p----~~  225 (320)
T d1xjda_         161 NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-----------EELFHSIRMDNPFYP----RW  225 (320)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHCCCCCC----TT
T ss_pred             cccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH-----------HHHHHHHHcCCCCCC----cc
Confidence            677899999999999999999999999999999999999999864321           122222222222211    12


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCHH-HHHH
Q 045493         1017 KLKSMIAVAFLCLDANPDCRPTMQ-KVCN 1044 (1048)
Q Consensus      1017 ~~~~l~~l~~~cl~~dP~~RPt~~-evl~ 1044 (1048)
                      ...++.+++.+||++||++|||+. |+++
T Consensus       226 ~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         226 LEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            234578999999999999999995 6653


No 38 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.1e-44  Score=388.86  Aligned_cols=252  Identities=22%  Similarity=0.303  Sum_probs=183.5

Q ss_pred             eeeecccccccEEEEEEcC------CCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeee-CCeEEEEE
Q 045493          781 MVLHGTGGCGTVYKAELTS------GDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSH-TQHLFLVY  852 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~-~~~~~lv~  852 (1048)
                      .+.||+|+||.||+|++..      ++.||||+++.............+...+.++ +|+|||.+++++.+ ....++||
T Consensus        18 ~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~   97 (299)
T d1ywna1          18 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV   97 (299)
T ss_dssp             EEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred             eeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEE
Confidence            4568999999999998652      3578999986544333222233333444444 69999999998865 45689999


Q ss_pred             EccCCCCHHHHHhcccc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceE
Q 045493          853 EYLERGSLATILSNEAT-------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAH  919 (1048)
Q Consensus       853 e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~k  919 (1048)
                      |||++|+|.++++....             ...+++.++..++.||++||+|||++   +||||||||+|||++.++.+|
T Consensus        98 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~~~~~~K  174 (299)
T d1ywna1          98 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVK  174 (299)
T ss_dssp             ECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEE
T ss_pred             EecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeECCCCcEE
Confidence            99999999999975432             23488999999999999999999999   999999999999999999999


Q ss_pred             EeccccccccCCCCC--CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCC-CCCcccccccCCCcccccch
Q 045493          920 VSDFGTAKFLKPDSS--NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGK-HPGHFLSLLLSLPAPAANMN  996 (1048)
Q Consensus       920 l~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~  996 (1048)
                      |+|||+|+.......  ......||+.|||||++.+..++.++|||||||++|||+||. .||.....          ..
T Consensus       175 l~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~----------~~  244 (299)
T d1ywna1         175 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----------DE  244 (299)
T ss_dssp             ECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC----------SH
T ss_pred             EccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH----------HH
Confidence            999999987654433  234567999999999999999999999999999999999975 56542211          11


Q ss_pred             hhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493          997 IVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus       997 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      .....+..+..+...   .....++.+++.+||+.||++||||+|++++|++
T Consensus       245 ~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~  293 (299)
T d1ywna1         245 EFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  293 (299)
T ss_dssp             HHHHHHHHTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCC---ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            111112222222111   1223468899999999999999999999999863


No 39 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=1.1e-43  Score=382.89  Aligned_cols=252  Identities=24%  Similarity=0.326  Sum_probs=191.8

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc--cchhhHHHHHHhhcccCceeeEeeEeeeCC----eEEEEE
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI--GINQKGFVSEITEIRHRNIVKFYGFCSHTQ----HLFLVY  852 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~----~~~lv~  852 (1048)
                      -.+.||+|+||+||+|++. +++.||||+++.......  .....+|++.++.++|||||++++++...+    ..|+||
T Consensus        11 i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvm   90 (277)
T d1o6ya_          11 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM   90 (277)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             EeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEE
Confidence            3456899999999999875 788999999976443321  223455677778899999999999987543    489999


Q ss_pred             EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493          853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD  932 (1048)
Q Consensus       853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~  932 (1048)
                      ||++||+|.+++...+   .+++.+++.++.||+.||+|||+.   +||||||||+||+++.++.++++|||.+......
T Consensus        91 E~~~g~~L~~~~~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~  164 (277)
T d1o6ya_          91 EYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADS  164 (277)
T ss_dssp             ECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEECC--
T ss_pred             ECCCCCEehhhhcccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhhccc
Confidence            9999999999986543   489999999999999999999999   9999999999999999999999999998765433


Q ss_pred             C---CCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCC
Q 045493          933 S---SNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPP 1009 (1048)
Q Consensus       933 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1048)
                      .   ......+||+.|||||++.+..++.++||||+||++|||+||+.||...+.           .............+
T Consensus       165 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----------~~~~~~~~~~~~~~  233 (277)
T d1o6ya_         165 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-----------VSVAYQHVREDPIP  233 (277)
T ss_dssp             --------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHHCCCCC
T ss_pred             cccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH-----------HHHHHHHHhcCCCC
Confidence            2   233456799999999999999999999999999999999999999864321           11122222222222


Q ss_pred             CchhHHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHhhC
Q 045493         1010 PLGEVEEKLKSMIAVAFLCLDANPDCRP-TMQKVCNLLCR 1048 (1048)
Q Consensus      1010 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~ 1048 (1048)
                      +.......+.++.+++.+||++||++|| |++++++.|.|
T Consensus       234 ~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         234 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence            1111223345688999999999999999 89999887754


No 40 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-43  Score=384.29  Aligned_cols=251  Identities=24%  Similarity=0.332  Sum_probs=193.4

Q ss_pred             eeeecccccccEEEEEEcCC--------CceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEE
Q 045493          781 MVLHGTGGCGTVYKAELTSG--------DTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLV  851 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~~--------~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv  851 (1048)
                      .+.||+|+||.||+|+....        ..||||+++.............+...+.++ +|||||+++++|.+++..++|
T Consensus        18 ~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v   97 (299)
T d1fgka_          18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI   97 (299)
T ss_dssp             EEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEE
Confidence            34689999999999986532        368999987654433323334455556666 799999999999999999999


Q ss_pred             EEccCCCCHHHHHhcccc-------------ccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCce
Q 045493          852 YEYLERGSLATILSNEAT-------------AAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA  918 (1048)
Q Consensus       852 ~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~  918 (1048)
                      |||+++|+|.++++....             ...+++.++.+++.||+.||+|||+.   +||||||||+|||++.++.+
T Consensus        98 ~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl~~~~~~  174 (299)
T d1fgka_          98 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVM  174 (299)
T ss_dssp             ECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCE
T ss_pred             EEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceeecCCCCe
Confidence            999999999999965432             24589999999999999999999999   99999999999999999999


Q ss_pred             EEeccccccccCCCCC--CccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccc
Q 045493          919 HVSDFGTAKFLKPDSS--NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANM  995 (1048)
Q Consensus       919 kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~  995 (1048)
                      ||+|||+++.......  ......||+.|+|||++.++.|+.++|||||||++|||++ |+.||....           .
T Consensus       175 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~-----------~  243 (299)
T d1fgka_         175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----------V  243 (299)
T ss_dssp             EECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------H
T ss_pred             EeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC-----------H
Confidence            9999999987754332  2344678999999999999999999999999999999998 677765322           1


Q ss_pred             hhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493          996 NIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus       996 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      ......+..+..++..   ......+.+++.+||+.||++||||.||++.|++
T Consensus       244 ~~~~~~i~~~~~~~~p---~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~  293 (299)
T d1fgka_         244 EELFKLLKEGHRMDKP---SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  293 (299)
T ss_dssp             HHHHHHHHTTCCCCCC---SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCC---ccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            2222222232222221   1233468899999999999999999999999974


No 41 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-43  Score=386.90  Aligned_cols=245  Identities=21%  Similarity=0.273  Sum_probs=201.5

Q ss_pred             eeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493          781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLERGS  859 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~  859 (1048)
                      .+.||+|+||+||+|.++ +++.||||++......  .....+|++.++.++|||||++++++.+.+..|+|||||+||+
T Consensus        10 ~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~--~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~   87 (321)
T d1tkia_          10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD--QVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLD   87 (321)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHH--HHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCB
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEcCCccc--HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCc
Confidence            346899999999999886 6788999998654322  2334567777899999999999999999999999999999999


Q ss_pred             HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC--CceEEeccccccccCCCCCCcc
Q 045493          860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE--YKAHVSDFGTAKFLKPDSSNWS  937 (1048)
Q Consensus       860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~--~~~kl~DfG~a~~~~~~~~~~~  937 (1048)
                      |.+++...  ...+++.+++.++.||+.||+|||+.   +|+||||||+|||++.+  +.+||+|||+++..... ....
T Consensus        88 L~~~i~~~--~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~-~~~~  161 (321)
T d1tkia_          88 IFERINTS--AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-DNFR  161 (321)
T ss_dssp             HHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-CEEE
T ss_pred             HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhccccC-Cccc
Confidence            99999653  23489999999999999999999999   99999999999999854  58999999999876433 3344


Q ss_pred             ccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHHHH
Q 045493          938 ELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVEEK 1017 (1048)
Q Consensus       938 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1048)
                      ...+|+.|+|||...+..|+.++||||+||++|||++|+.||....           .......+.......+.......
T Consensus       162 ~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~-----------~~~~~~~i~~~~~~~~~~~~~~~  230 (321)
T d1tkia_         162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-----------NQQIIENIMNAEYTFDEEAFKEI  230 (321)
T ss_dssp             EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-----------HHHHHHHHHHTCCCCCHHHHTTS
T ss_pred             ccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCChhhccCC
Confidence            5679999999999999999999999999999999999999986322           22334444444444333333344


Q ss_pred             HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1018 LKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1018 ~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      ..++.+++.+||+.||++|||++|+++
T Consensus       231 s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         231 SIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            567889999999999999999999987


No 42 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-43  Score=379.99  Aligned_cols=249  Identities=22%  Similarity=0.317  Sum_probs=184.9

Q ss_pred             eeeecccccccEEEEEEcC--C--CceeeEEeccCCCCcc--cchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493          781 MVLHGTGGCGTVYKAELTS--G--DTRAVKKLHSLPTGEI--GINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY  854 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~--~--~~vavk~~~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  854 (1048)
                      .+.||+|+||.||+|++..  +  ..||||++........  .....+++..++.++|||||+++|+|.+ ...++||||
T Consensus        13 ~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~   91 (273)
T d1u46a_          13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTEL   91 (273)
T ss_dssp             EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             EEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeee
Confidence            4468999999999998642  2  2689998865433221  2234556677788999999999999975 467899999


Q ss_pred             cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493          855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS  934 (1048)
Q Consensus       855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~  934 (1048)
                      +++|++.+++...  ...+++..++.++.|||+||+|||++   +|+||||||+||+++.++.+||+|||+++.......
T Consensus        92 ~~~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~  166 (273)
T d1u46a_          92 APLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD  166 (273)
T ss_dssp             CTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC
T ss_pred             ecCcchhhhhhcc--cCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhcccCCC
Confidence            9999999988653  34589999999999999999999999   999999999999999999999999999998755433


Q ss_pred             C---ccccccccccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCcccccccCCCcccccchhhhhhhccCCCCCC
Q 045493          935 N---WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIE-GKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPP 1010 (1048)
Q Consensus       935 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1048)
                      .   .....||..|+|||++.+..++.++|||||||++|||+| |+.||...+           .......+......++
T Consensus       167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~-----------~~~~~~~i~~~~~~~~  235 (273)
T d1u46a_         167 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN-----------GSQILHKIDKEGERLP  235 (273)
T ss_dssp             EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------HHHHHHHHHTSCCCCC
T ss_pred             cceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcC-----------HHHHHHHHHhCCCCCC
Confidence            2   234567889999999999999999999999999999998 899986332           1122223322222111


Q ss_pred             chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493         1011 LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus      1011 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      .  .......+.+++.+||+.||++||||+||.+.|.+
T Consensus       236 ~--~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         236 R--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             C--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             C--cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            1  11223468899999999999999999999999863


No 43 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.5e-43  Score=384.03  Aligned_cols=252  Identities=19%  Similarity=0.306  Sum_probs=202.3

Q ss_pred             ceeeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEE
Q 045493          780 KMVLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYE  853 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  853 (1048)
                      ..+.||+|+||+||+|.+.      +++.||||+++............+++..+++++|||||+++|+|...+..++|||
T Consensus        24 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e  103 (308)
T d1p4oa_          24 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME  103 (308)
T ss_dssp             EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             EeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEe
Confidence            3456899999999999874      2568999999754433322334567777888999999999999999999999999


Q ss_pred             ccCCCCHHHHHhccc-------cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccc
Q 045493          854 YLERGSLATILSNEA-------TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTA  926 (1048)
Q Consensus       854 ~~~~g~L~~~l~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a  926 (1048)
                      |+++|+|.+++....       ....+++..+.+++.|+|+||.|||++   +|+||||||+|||++.++++||+|||+|
T Consensus       104 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~DFGla  180 (308)
T d1p4oa_         104 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT  180 (308)
T ss_dssp             CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred             ecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEeecccc
Confidence            999999999986432       223468899999999999999999999   9999999999999999999999999999


Q ss_pred             cccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCC-CCCcccccccCCCcccccchhhhhhhc
Q 045493          927 KFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGK-HPGHFLSLLLSLPAPAANMNIVVNDLI 1003 (1048)
Q Consensus       927 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1048)
                      +........  .....||+.|+|||.+.++.++.++|||||||++|||+||+ .||...           ........+.
T Consensus       181 ~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-----------~~~~~~~~i~  249 (308)
T d1p4oa_         181 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----------SNEQVLRFVM  249 (308)
T ss_dssp             CGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----------CHHHHHHHHH
T ss_pred             eeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-----------CHHHHHHHHH
Confidence            876544332  23446899999999999999999999999999999999985 555422           2233344444


Q ss_pred             cCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493         1004 DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus      1004 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      ++..++...   .....+.+++.+||+.||++||||+||+++|++
T Consensus       250 ~~~~~~~p~---~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~  291 (308)
T d1p4oa_         250 EGGLLDKPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  291 (308)
T ss_dssp             TTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred             hCCCCCCcc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            444433322   233568899999999999999999999999874


No 44 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=2.5e-43  Score=392.82  Aligned_cols=244  Identities=19%  Similarity=0.225  Sum_probs=190.6

Q ss_pred             eeeecccccccEEEEEEc-CCCceeeEEeccCCCC--cccchh---hHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEc
Q 045493          781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTG--EIGINQ---KGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEY  854 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~---~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  854 (1048)
                      ...||+|+||.||+|++. +|+.||||++......  ......   ..+++.++.++|||||++++++.+.+..|+||||
T Consensus         9 ~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~   88 (364)
T d1omwa3           9 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL   88 (364)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEe
Confidence            457899999999999986 6889999998643211  111112   2234445667899999999999999999999999


Q ss_pred             cCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCC
Q 045493          855 LERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSS  934 (1048)
Q Consensus       855 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~  934 (1048)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||+.   +||||||||+|||++.+|.+||+|||+|+.+...  
T Consensus        89 ~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~--  160 (364)
T d1omwa3          89 MNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--  160 (364)
T ss_dssp             CCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSSS--
T ss_pred             cCCCcHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCCC--
Confidence            99999999997543   478899999999999999999999   9999999999999999999999999999876543  


Q ss_pred             Ccccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchh
Q 045493          935 NWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGE 1013 (1048)
Q Consensus       935 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1048)
                      .....+||+.|||||++.. ..|+.++||||+||++|||+||+.||.....        .................+   
T Consensus       161 ~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--------~~~~~~~~~~~~~~~~~~---  229 (364)
T d1omwa3         161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--------KDKHEIDRMTLTMAVELP---  229 (364)
T ss_dssp             CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCS--------SCHHHHHHHSSSCCCCCC---
T ss_pred             cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhcccCCCCCC---
Confidence            3345689999999999874 5689999999999999999999999864221        111111222222222111   


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 045493         1014 VEEKLKSMIAVAFLCLDANPDCRPT-----MQKVCN 1044 (1048)
Q Consensus      1014 ~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 1044 (1048)
                       .....++.+++.+||++||++|||     |+|+++
T Consensus       230 -~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         230 -DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             -SSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             -CCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence             123346789999999999999999     688875


No 45 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-43  Score=386.85  Aligned_cols=252  Identities=22%  Similarity=0.310  Sum_probs=197.6

Q ss_pred             eeeecccccccEEEEEEc------CCCceeeEEeccCCCCcccchhhHHHHHHhhc-ccCceeeEeeEeeeCCeEEEEEE
Q 045493          781 MVLHGTGGCGTVYKAELT------SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-RHRNIVKFYGFCSHTQHLFLVYE  853 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e  853 (1048)
                      .+.||+|+||.||+|++.      +++.||||+++............+++..++.+ +|||||+++|+|.+.+..++|||
T Consensus        28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE  107 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE  107 (311)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEE
Confidence            346899999999999863      34579999997654433333345566666777 69999999999999999999999


Q ss_pred             ccCCCCHHHHHhccc---------------cccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCce
Q 045493          854 YLERGSLATILSNEA---------------TAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKA  918 (1048)
Q Consensus       854 ~~~~g~L~~~l~~~~---------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~  918 (1048)
                      |+++|+|.++++...               ....+++..+.+++.||++|++|||++   +||||||||+||+++.++.+
T Consensus       108 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~~~~~~~  184 (311)
T d1t46a_         108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRIT  184 (311)
T ss_dssp             CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETTTEE
T ss_pred             cCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccccccccccccCcc
Confidence            999999999997543               223588999999999999999999999   99999999999999999999


Q ss_pred             EEeccccccccCCCCCC--ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCC-CcccccccCCCcccccc
Q 045493          919 HVSDFGTAKFLKPDSSN--WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHP-GHFLSLLLSLPAPAANM  995 (1048)
Q Consensus       919 kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p-~~~~~~~~~~~~~~~~~  995 (1048)
                      |++|||.++........  ....+||+.|+|||++.++.++.++|||||||++|||+|+..| |....           .
T Consensus       185 ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~-----------~  253 (311)
T d1t46a_         185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP-----------V  253 (311)
T ss_dssp             EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----------S
T ss_pred             cccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCC-----------H
Confidence            99999999977644332  2346789999999999999999999999999999999995544 43211           1


Q ss_pred             hhhhhhhccCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhC
Q 045493          996 NIVVNDLIDSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLCR 1048 (1048)
Q Consensus       996 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1048 (1048)
                      ...+.+++.....+...  ......+.+++.+||+.||++||||+|++++|++
T Consensus       254 ~~~~~~~i~~~~~~~~~--~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~  304 (311)
T d1t46a_         254 DSKFYKMIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (311)
T ss_dssp             SHHHHHHHHHTCCCCCC--TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCc--ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            12222222222222111  1233568899999999999999999999999974


No 46 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=5.3e-43  Score=388.00  Aligned_cols=242  Identities=20%  Similarity=0.237  Sum_probs=197.9

Q ss_pred             cceeeecccccccEEEEEEc-CCCceeeEEeccCCC--CcccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEcc
Q 045493          779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPT--GEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYL  855 (1048)
Q Consensus       779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  855 (1048)
                      ...+.||+|+||+||+|+++ +|+.||||++.....  .........+++.++.++|||||++++++.+....++||||+
T Consensus        44 ~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~  123 (350)
T d1rdqe_          44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV  123 (350)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccc
Confidence            34557999999999999886 689999999864321  111223456677788999999999999999999999999999


Q ss_pred             CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCC
Q 045493          856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSN  935 (1048)
Q Consensus       856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~  935 (1048)
                      .+|++.+++.+.+   .+++..++.++.||+.||.|||+.   +||||||||+|||++.+|.+||+|||+|+.+...   
T Consensus       124 ~~g~l~~~l~~~~---~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~---  194 (350)
T d1rdqe_         124 AGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---  194 (350)
T ss_dssp             TTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---
T ss_pred             cccchhhhHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeecccc---
Confidence            9999999997543   489999999999999999999999   9999999999999999999999999999876532   


Q ss_pred             ccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCCCchhHH
Q 045493          936 WSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPPPLGEVE 1015 (1048)
Q Consensus       936 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1048)
                      ....+||+.|||||++.+..++.++||||+||++|||+||+.||...+           .......+.......+.    
T Consensus       195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~-----------~~~~~~~i~~~~~~~p~----  259 (350)
T d1rdqe_         195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----------PIQIYEKIVSGKVRFPS----  259 (350)
T ss_dssp             BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCT----
T ss_pred             cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC-----------HHHHHHHHhcCCCCCCc----
Confidence            345689999999999999999999999999999999999999986322           12222333333322221    


Q ss_pred             HHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 045493         1016 EKLKSMIAVAFLCLDANPDCRP-----TMQKVCN 1044 (1048)
Q Consensus      1016 ~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 1044 (1048)
                      ....++.+++.+||+.||++|+     |++|+++
T Consensus       260 ~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             cCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            2234678899999999999994     8999986


No 47 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.9e-42  Score=374.75  Aligned_cols=261  Identities=20%  Similarity=0.282  Sum_probs=194.3

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER  857 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  857 (1048)
                      ..+.||+|+||+||+|++. +++.||||+++.....+ ......+|++.+++++|||||++++++.+.+..|+||||+.+
T Consensus         6 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~   85 (298)
T d1gz8a_           6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ   85 (298)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             eccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCC
Confidence            4567999999999999885 68899999996543322 233455678888999999999999999999999999999977


Q ss_pred             CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493          858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS  937 (1048)
Q Consensus       858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  937 (1048)
                      + +.+++... ....+++..+..++.|++.||+|||+.   +||||||||+|||++.++.+||+|||.|+..........
T Consensus        86 ~-~~~~~~~~-~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~  160 (298)
T d1gz8a_          86 D-LKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT  160 (298)
T ss_dssp             E-HHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTT
T ss_pred             c-hhhhhhhh-cccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCCcccce
Confidence            5 44444322 234589999999999999999999999   999999999999999999999999999988766555566


Q ss_pred             ccccccccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCcccccchhhhhhhccCCC
Q 045493          938 ELAGTCGYIAPELAYTMR-ANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAANMNIVVNDLIDSRL 1007 (1048)
Q Consensus       938 ~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 1007 (1048)
                      ...||+.|+|||.+.... ++.++||||+||++|||++|+.||...+...         ..+..................
T Consensus       161 ~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T d1gz8a_         161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF  240 (298)
T ss_dssp             CCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTS
T ss_pred             eecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccccc
Confidence            678999999999877666 4889999999999999999999996533210         000000000000000000001


Q ss_pred             CC----Cc-hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493         1008 PP----PL-GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus      1008 ~~----~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
                      +.    .. ........++.+++.+||+.||++|||++|+++.
T Consensus       241 ~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             CCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            00    00 0011223568899999999999999999999874


No 48 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-42  Score=370.13  Aligned_cols=235  Identities=22%  Similarity=0.340  Sum_probs=188.5

Q ss_pred             eeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-----cchhhHHHHHHhhcc--cCceeeEeeEeeeCCeEEEEE
Q 045493          781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-----GINQKGFVSEITEIR--HRNIVKFYGFCSHTQHLFLVY  852 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-----~~~~~~~~~~l~~l~--h~niv~~~~~~~~~~~~~lv~  852 (1048)
                      .+.||+|+||+||+|++. +++.||||++........     ......++..+++++  |||||++++++.+.+..|+||
T Consensus         9 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~   88 (273)
T d1xwsa_           9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL   88 (273)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred             eEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEE
Confidence            456899999999999886 688999999875432221     122346677777776  899999999999999999999


Q ss_pred             EccCC-CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCC-CceEEeccccccccC
Q 045493          853 EYLER-GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLE-YKAHVSDFGTAKFLK  930 (1048)
Q Consensus       853 e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~-~~~kl~DfG~a~~~~  930 (1048)
                      ||+.+ +++.+++...   ..+++.+++.++.|++.||+|||+.   +|+||||||+||+++.+ +.+||+|||+|+...
T Consensus        89 e~~~~~~~l~~~~~~~---~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~  162 (273)
T d1xwsa_          89 ERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK  162 (273)
T ss_dssp             ECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             EeccCcchHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECccccceecc
Confidence            99986 6888888653   3489999999999999999999999   99999999999999854 799999999998654


Q ss_pred             CCCCCccccccccccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCCCC
Q 045493          931 PDSSNWSELAGTCGYIAPELAYTMRA-NEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRLPP 1009 (1048)
Q Consensus       931 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1048)
                      .  ......+||+.|||||++.+..+ +.++||||+||++|||++|+.||......                 .......
T Consensus       163 ~--~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i-----------------~~~~~~~  223 (273)
T d1xwsa_         163 D--TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----------------IRGQVFF  223 (273)
T ss_dssp             S--SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-----------------HHCCCCC
T ss_pred             c--ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHH-----------------hhcccCC
Confidence            3  33456789999999999987765 67799999999999999999998643211                 1111111


Q ss_pred             CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1010 PLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1010 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      +.    ..+.++.+++.+||+.||++|||++|+++
T Consensus       224 ~~----~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         224 RQ----RVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             SS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CC----CCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            11    11245788999999999999999999986


No 49 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=6.6e-42  Score=371.26  Aligned_cols=260  Identities=23%  Similarity=0.306  Sum_probs=192.9

Q ss_pred             cceeeecccccccEEEEEEcCCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493          779 GKMVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER  857 (1048)
Q Consensus       779 ~~~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  857 (1048)
                      ...+.||+|+||+||+|++++++.||||++......+ ......+++..+++++|||||++++++.+.+..++||||+.+
T Consensus         5 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~   84 (286)
T d1ob3a_           5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ   84 (286)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred             eeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehh
Confidence            3456789999999999999999999999996643322 233445667777899999999999999999999999999998


Q ss_pred             CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493          858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS  937 (1048)
Q Consensus       858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  937 (1048)
                      +.+..+.+..   ..+++..+..++.||+.||+|||+.   +||||||||+|||++.++.+|++|||.|...........
T Consensus        85 ~~~~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  158 (286)
T d1ob3a_          85 DLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT  158 (286)
T ss_dssp             EHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             hhHHHHHhhc---CCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence            8777776533   4489999999999999999999998   999999999999999999999999999988765555555


Q ss_pred             ccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCcccccchh-hh---hhhc
Q 045493          938 ELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAANMNI-VV---NDLI 1003 (1048)
Q Consensus       938 ~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~~~~-~~---~~~~ 1003 (1048)
                      ...|++.|+|||.+.+. .++.++||||+||++|||++|+.||...+...         +.+........ ..   ....
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T d1ob3a_         159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF  238 (286)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred             eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence            66799999999998754 46999999999999999999999996432110         00000000000 00   0000


Q ss_pred             cCCCCCC-chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1004 DSRLPPP-LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1004 ~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      ....+.+ ..........+.+++.+||+.||++|||++|+++
T Consensus       239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0000100 0111223356889999999999999999999984


No 50 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5e-41  Score=368.38  Aligned_cols=260  Identities=19%  Similarity=0.268  Sum_probs=187.8

Q ss_pred             cceeeecccccccEEEEEEc-C-CCceeeEEeccCCCCc-ccchhhHHHHHHh---hcccCceeeEeeEeee-----CCe
Q 045493          779 GKMVLHGTGGCGTVYKAELT-S-GDTRAVKKLHSLPTGE-IGINQKGFVSEIT---EIRHRNIVKFYGFCSH-----TQH  847 (1048)
Q Consensus       779 ~~~~~lG~G~~g~Vy~~~~~-~-~~~vavk~~~~~~~~~-~~~~~~~~~~~l~---~l~h~niv~~~~~~~~-----~~~  847 (1048)
                      .....||+|+||+||+|++. + ++.||||+++.....+ ......+++..++   ..+||||++++++|..     ...
T Consensus        10 ~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~   89 (305)
T d1blxa_          10 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK   89 (305)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEE
T ss_pred             EEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCce
Confidence            34557899999999999884 4 4568999986543322 2223334455444   4579999999999853     346


Q ss_pred             EEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493          848 LFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAK  927 (1048)
Q Consensus       848 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~  927 (1048)
                      .+++|||+++|++......  ....+++..++.++.|++.||+|||+.   +||||||||+|||++.++.+||+|||.++
T Consensus        90 ~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg~~~  164 (305)
T d1blxa_          90 LTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR  164 (305)
T ss_dssp             EEEEEECCSCBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             EEEEEEeccCCchhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchhhhh
Confidence            8999999999877655433  334578999999999999999999999   99999999999999999999999999987


Q ss_pred             ccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCccccc-chh
Q 045493          928 FLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPAAN-MNI  997 (1048)
Q Consensus       928 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~~~-~~~  997 (1048)
                      .... ........||+.|||||++.+..|+.++||||+||++|||++|+.||...+...         ..+..... ...
T Consensus       165 ~~~~-~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  243 (305)
T d1blxa_         165 IYSF-QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV  243 (305)
T ss_dssp             CCCG-GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTC
T ss_pred             hhcc-cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccc
Confidence            6432 233456789999999999999999999999999999999999999997543210         00000000 000


Q ss_pred             h-hhhhccCCCCCC-chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493          998 V-VNDLIDSRLPPP-LGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus       998 ~-~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      . ...........+ ..........+.+++.+||+.||++||||+|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         244 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             SSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            0 000000011111 0111122346778999999999999999999986


No 51 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-40  Score=368.04  Aligned_cols=256  Identities=23%  Similarity=0.272  Sum_probs=188.2

Q ss_pred             cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeee------CCeEEEE
Q 045493          779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSH------TQHLFLV  851 (1048)
Q Consensus       779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~------~~~~~lv  851 (1048)
                      ...++||+|+||+||+|++. +++.||||++.....     ...+|++.+++++||||++++++|..      ..+.|+|
T Consensus        23 ~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv   97 (350)
T d1q5ka_          23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV   97 (350)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred             EeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence            34567999999999999986 688999999865322     23457788899999999999999853      2357999


Q ss_pred             EEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC-ceEEeccccccccC
Q 045493          852 YEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLK  930 (1048)
Q Consensus       852 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~-~~kl~DfG~a~~~~  930 (1048)
                      |||+++|.+....+.......+++.+++.++.||+.||+|||++   +|+||||||+|||++.++ .+||+|||+++...
T Consensus        98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~  174 (350)
T d1q5ka_          98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV  174 (350)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEECC
T ss_pred             EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhcc
Confidence            99998865444443333445689999999999999999999998   999999999999999875 89999999998765


Q ss_pred             CCCCCcccccccccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCcccccccC---------CCcccccchhhhh
Q 045493          931 PDSSNWSELAGTCGYIAPELAYT-MRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS---------LPAPAANMNIVVN 1000 (1048)
Q Consensus       931 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~---------~~~~~~~~~~~~~ 1000 (1048)
                      ... .....+||+.|+|||.+.+ ..++.++||||+||++|||++|+.||........         .+... .......
T Consensus       175 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~-~~~~~~~  252 (350)
T d1q5ka_         175 RGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE-QIREMNP  252 (350)
T ss_dssp             TTS-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHH-HHHHHCC
T ss_pred             CCc-ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHH-hhhhhcc
Confidence            433 3345689999999998765 5689999999999999999999999864332100         00000 0000000


Q ss_pred             hhccCCCCC----Cch--hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1001 DLIDSRLPP----PLG--EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1001 ~~~~~~~~~----~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      .......+.    +..  .......++.+++.+||+.||++||||+|+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             ---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             chhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            000111110    000  00122346888999999999999999999986


No 52 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.2e-40  Score=364.89  Aligned_cols=261  Identities=18%  Similarity=0.235  Sum_probs=187.6

Q ss_pred             CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCceeeEeeEeeeCC----eEEEEE
Q 045493          778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRNIVKFYGFCSHTQ----HLFLVY  852 (1048)
Q Consensus       778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~----~~~lv~  852 (1048)
                      +.....||+|+||+||+|.+. +++.||||++.............+|+..++.++||||+++++++....    ..++++
T Consensus        10 Y~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~   89 (345)
T d1pmea_          10 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV   89 (345)
T ss_dssp             EEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred             eEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEE
Confidence            344567999999999999875 789999999975443333334456777889999999999999986543    234455


Q ss_pred             EccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCC
Q 045493          853 EYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPD  932 (1048)
Q Consensus       853 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~  932 (1048)
                      +|+.+|+|.+++...    .+++..++.++.|++.||+|||++   +||||||||+|||++.++.+||+|||+|+.....
T Consensus        90 ~~~~~g~L~~~l~~~----~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~  162 (345)
T d1pmea_          90 THLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD  162 (345)
T ss_dssp             EECCCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred             EeecCCchhhhhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccCC
Confidence            667799999999643    489999999999999999999999   9999999999999999999999999999876433


Q ss_pred             CC---Cccccccccccccccccc-cCCCCchhhHHHHHHHHHHHHhCCCCCcccccc---------cCCCccccc-----
Q 045493          933 SS---NWSELAGTCGYIAPELAY-TMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLL---------LSLPAPAAN-----  994 (1048)
Q Consensus       933 ~~---~~~~~~gt~~y~aPE~~~-~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~---------~~~~~~~~~-----  994 (1048)
                      ..   .....+||+.|+|||++. +..++.++||||+||++|||++|+.||......         ...+.....     
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (345)
T d1pmea_         163 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN  242 (345)
T ss_dssp             GCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCC
T ss_pred             CccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhh
Confidence            22   234567999999999985 456789999999999999999999998643210         000000000     


Q ss_pred             chhh-hhhhccCCCCCCch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493          995 MNIV-VNDLIDSRLPPPLG-EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus       995 ~~~~-~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
                      .... ...........+.. .......++.+++.+||+.||++||||+|+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0000 00000001111110 011123468899999999999999999999873


No 53 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=2.3e-39  Score=351.28  Aligned_cols=250  Identities=16%  Similarity=0.194  Sum_probs=192.6

Q ss_pred             eeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhccc-CceeeEeeEeeeCCeEEEEEEccCCC
Q 045493          781 MVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRH-RNIVKFYGFCSHTQHLFLVYEYLERG  858 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~g  858 (1048)
                      .+.||+|+||+||+|++. +++.||||.+......   ....++.++++.++| +||+.+++++.+....++||||+ +|
T Consensus        10 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~   85 (293)
T d1csna_          10 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA---PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GP   85 (293)
T ss_dssp             EEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS---CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEccccCc---HHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CC
Confidence            456899999999999976 6788999987554322   234566777877765 89999999999999999999999 67


Q ss_pred             CHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC-----CCceEEeccccccccCCCC
Q 045493          859 SLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL-----EYKAHVSDFGTAKFLKPDS  933 (1048)
Q Consensus       859 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~-----~~~~kl~DfG~a~~~~~~~  933 (1048)
                      +|.++++...  ..+++.++..++.|++.||+|||+.   +||||||||+||+++.     ++.+||+|||+|+.+....
T Consensus        86 ~l~~~~~~~~--~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~  160 (293)
T d1csna_          86 SLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV  160 (293)
T ss_dssp             BHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred             CHHHHHHhhc--cchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence            9999986533  3488999999999999999999999   9999999999999974     5789999999998765432


Q ss_pred             C-------CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCC
Q 045493          934 S-------NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSR 1006 (1048)
Q Consensus       934 ~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1048)
                      .       .....+||+.|||||++.+..++.++||||+||++|||+||+.||......        ........+...+
T Consensus       161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~--------~~~~~~~~i~~~~  232 (293)
T d1csna_         161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA--------TNKQKYERIGEKK  232 (293)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC--------CHHHHHHHHHHHH
T ss_pred             cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccch--------hHHHHHHHHHhcc
Confidence            1       123467999999999999999999999999999999999999998632211        0111111111111


Q ss_pred             CCCCch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493         1007 LPPPLG-EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus      1007 ~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
                      ...+.. ......+++.+++..|++.+|++||+++.+.+.|+
T Consensus       233 ~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~  274 (293)
T d1csna_         233 QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS  274 (293)
T ss_dssp             HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             CCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence            111100 00112346788889999999999999999888765


No 54 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.1e-39  Score=352.11  Aligned_cols=259  Identities=19%  Similarity=0.245  Sum_probs=195.7

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeCCeEEEEEEccCC
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHTQHLFLVYEYLER  857 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  857 (1048)
                      ....||+|+||+||+|++. +++.||||+++.....+ ......+++..++.++||||+++++++.+....++|+|++.+
T Consensus         6 ~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~   85 (292)
T d1unla_           6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ   85 (292)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSE
T ss_pred             eeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeeccc
Confidence            4457899999999999986 67889999986544332 223345677778899999999999999999999999999999


Q ss_pred             CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccCCCCCCcc
Q 045493          858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLKPDSSNWS  937 (1048)
Q Consensus       858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  937 (1048)
                      +++..+++..   ..+++..++.++.|++.||+|||++   +||||||||+|||++.++.+|++|||.|+..........
T Consensus        86 ~~l~~~~~~~---~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~  159 (292)
T d1unla_          86 DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS  159 (292)
T ss_dssp             EHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCC
T ss_pred             cccccccccc---cccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCCCccce
Confidence            9998887643   3478899999999999999999999   999999999999999999999999999998766555555


Q ss_pred             ccccccccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCcccccc----------cCCCccccc-chhhhhhhc--
Q 045493          938 ELAGTCGYIAPELAYTMR-ANEKCDVFNFGVLVLEVIEGKHPGHFLSLL----------LSLPAPAAN-MNIVVNDLI-- 1003 (1048)
Q Consensus       938 ~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gvvl~elltg~~p~~~~~~~----------~~~~~~~~~-~~~~~~~~~-- 1003 (1048)
                      ...+++.|+|||.+.... ++.++||||+||++|||++|+.||......          ...+..... .........  
T Consensus       160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (292)
T d1unla_         160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY  239 (292)
T ss_dssp             SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred             eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccc
Confidence            567888999999987665 689999999999999999999996321110          000000000 000000000  


Q ss_pred             --cCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493         1004 --DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus      1004 --~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                        .................+.+++.+|++.||++||||+|+++
T Consensus       240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              00000011111223356788999999999999999999986


No 55 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.3e-39  Score=357.09  Aligned_cols=261  Identities=20%  Similarity=0.252  Sum_probs=186.2

Q ss_pred             cceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeee--------CCeE
Q 045493          779 GKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSH--------TQHL  848 (1048)
Q Consensus       779 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~--------~~~~  848 (1048)
                      .....||+|+||+||+|++. +++.||||++......+ ......+|+..++.++||||+++++++..        .+..
T Consensus        13 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~   92 (318)
T d3blha1          13 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSI   92 (318)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CE
T ss_pred             EEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceE
Confidence            34456899999999999985 78999999986543332 22334567777899999999999998754        3468


Q ss_pred             EEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccc
Q 045493          849 FLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKF  928 (1048)
Q Consensus       849 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~  928 (1048)
                      |+||||++++.+..+...   ...++...++.+++|++.||.|||+.   +|+||||||+|||++.++.+|++|||+++.
T Consensus        93 ~iv~e~~~~~~~~~~~~~---~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~~~  166 (318)
T d3blha1          93 YLVFDFCEHDLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARA  166 (318)
T ss_dssp             EEEEECCCEEHHHHHTCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEeccCCCccchhhhc---ccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecceeee
Confidence            999999998777655432   33478899999999999999999999   999999999999999999999999999987


Q ss_pred             cCCCCC----CccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCcccccccC---------CCcccc-
Q 045493          929 LKPDSS----NWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS---------LPAPAA-  993 (1048)
Q Consensus       929 ~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~---------~~~~~~-  993 (1048)
                      +.....    .....+||+.|+|||++.+. .++.++||||+||++|||++|+.||+.......         .+.... 
T Consensus       167 ~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  246 (318)
T d3blha1         167 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW  246 (318)
T ss_dssp             CCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred             cccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence            653321    22345799999999998765 689999999999999999999999864321100         000000 


Q ss_pred             ---cchhhhhhhccCCCCC-Cchh---HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493          994 ---NMNIVVNDLIDSRLPP-PLGE---VEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus       994 ---~~~~~~~~~~~~~~~~-~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
                         ................ ....   .......+.+++.+||+.||++||||+|++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence               0000000000000011 0000   01123467789999999999999999999874


No 56 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=3.1e-39  Score=352.57  Aligned_cols=251  Identities=16%  Similarity=0.190  Sum_probs=186.7

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcccCc-eeeEeeEeeeCCeEEEEEEccCC
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIRHRN-IVKFYGFCSHTQHLFLVYEYLER  857 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~  857 (1048)
                      -.+.||+|+||+||+|++. +++.||||.+......   .....+.+.++.++|++ |+.+.+++.+.+..++||||+. 
T Consensus        11 l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~-   86 (299)
T d1ckia_          11 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG-   86 (299)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS---CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC-
T ss_pred             EeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC---HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC-
Confidence            3456899999999999875 6789999987654332   23456677788887666 4555666678889999999995 


Q ss_pred             CCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECC---CCceEEeccccccccCCCCC
Q 045493          858 GSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDL---EYKAHVSDFGTAKFLKPDSS  934 (1048)
Q Consensus       858 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~---~~~~kl~DfG~a~~~~~~~~  934 (1048)
                      |++.+.+...  ...+++..+..++.|++.||+|||++   +||||||||+||+++.   +..+|++|||+|+.+.....
T Consensus        87 ~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (299)
T d1ckia_          87 PSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  161 (299)
T ss_dssp             CBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT
T ss_pred             Cchhhhhhhc--cCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceecccccc
Confidence            4676666432  34589999999999999999999999   9999999999999864   45799999999998764332


Q ss_pred             -------CccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCC
Q 045493          935 -------NWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRL 1007 (1048)
Q Consensus       935 -------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1048)
                             ......||+.|||||++.+..++.++|||||||++|||+||+.||...........        .........
T Consensus       162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~--------~~~~~~~~~  233 (299)
T d1ckia_         162 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK--------YERISEKKM  233 (299)
T ss_dssp             CCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC---------------HHHHHHHHH
T ss_pred             ccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHH--------HHHhhcccC
Confidence                   12346799999999999999999999999999999999999999864332111100        000000000


Q ss_pred             CCCch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 045493         1008 PPPLG-EVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNLLC 1047 (1048)
Q Consensus      1008 ~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1047 (1048)
                      ..+.. .......++.+++..||+.+|++||+++++.+.|+
T Consensus       234 ~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~  274 (299)
T d1ckia_         234 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR  274 (299)
T ss_dssp             HSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHH
T ss_pred             CCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence            01100 01122356888999999999999999999988775


No 57 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-39  Score=361.44  Aligned_cols=257  Identities=18%  Similarity=0.243  Sum_probs=184.7

Q ss_pred             CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeeeCC------eEE
Q 045493          778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSHTQ------HLF  849 (1048)
Q Consensus       778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~------~~~  849 (1048)
                      +.....||+|+||+||+|.+. +++.||||+++.....+. .....+++..++.++|||||+++++|...+      ++|
T Consensus        20 Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~   99 (346)
T d1cm8a_          20 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY   99 (346)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEE
Confidence            344567899999999999876 688999999975433221 223455677788999999999999997654      579


Q ss_pred             EEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccccccc
Q 045493          850 LVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL  929 (1048)
Q Consensus       850 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~  929 (1048)
                      +||||+ ++++..+.+.    ..+++..++.++.||+.||+|||+.   +||||||||+|||++.++.+|++|||+|+..
T Consensus       100 lv~e~~-~~~l~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~  171 (346)
T d1cm8a_         100 LVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA  171 (346)
T ss_dssp             EEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEecc-cccHHHHHHh----ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceecc
Confidence            999999 5588887753    2489999999999999999999999   9999999999999999999999999999875


Q ss_pred             CCCCCCccccccccccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCcccccccC---------CCccc------c
Q 045493          930 KPDSSNWSELAGTCGYIAPELAYTM-RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS---------LPAPA------A  993 (1048)
Q Consensus       930 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~---------~~~~~------~  993 (1048)
                      ..   ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...+....         .+...      .
T Consensus       172 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (346)
T d1cm8a_         172 DS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS  248 (346)
T ss_dssp             CS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred             CC---ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcc
Confidence            43   33456899999999998764 568999999999999999999999864332100         00000      0


Q ss_pred             cchhhhhhhccCCCCCCc-hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493          994 NMNIVVNDLIDSRLPPPL-GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus       994 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
                      .................. .........+.+++.+||+.||++||||+|+++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         249 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            000000000000000000 0111223467889999999999999999999874


No 58 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.8e-40  Score=359.21  Aligned_cols=249  Identities=22%  Similarity=0.292  Sum_probs=193.7

Q ss_pred             cceeeecccccccEEEEEEc----CCCceeeEEeccCCC---CcccchhhHHHHHHhhccc-CceeeEeeEeeeCCeEEE
Q 045493          779 GKMVLHGTGGCGTVYKAELT----SGDTRAVKKLHSLPT---GEIGINQKGFVSEITEIRH-RNIVKFYGFCSHTQHLFL  850 (1048)
Q Consensus       779 ~~~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~---~~~~~~~~~~~~~l~~l~h-~niv~~~~~~~~~~~~~l  850 (1048)
                      ...+.||+|+||+||+|+..    +|+.||||++.....   ........+|++.+++++| |||+++++++.+....++
T Consensus        27 ~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~  106 (322)
T d1vzoa_          27 ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHL  106 (322)
T ss_dssp             EEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEE
T ss_pred             EEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceee
Confidence            34557999999999999863    467899999865322   1222344567888888876 899999999999999999


Q ss_pred             EEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccC
Q 045493          851 VYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK  930 (1048)
Q Consensus       851 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~  930 (1048)
                      ||||+.+|+|.+++...+.   +....+..++.|++.|++|+|+.   +||||||||+||+++.++.+||+|||+|+.+.
T Consensus       107 v~e~~~~~~L~~~i~~~~~---~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~  180 (322)
T d1vzoa_         107 ILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  180 (322)
T ss_dssp             EECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             eeecccccHHHHHHHhccc---ccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchhhhc
Confidence            9999999999999976543   67788999999999999999999   99999999999999999999999999998764


Q ss_pred             CCC-CCccccccccccccccccccC--CCCchhhHHHHHHHHHHHHhCCCCCcccccccCCCcccccchhhhhhhccCCC
Q 045493          931 PDS-SNWSELAGTCGYIAPELAYTM--RANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPAPAANMNIVVNDLIDSRL 1007 (1048)
Q Consensus       931 ~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1048)
                      ... .......|++.|+|||.+.+.  .++.++||||+||++|||++|+.||.....       ................
T Consensus       181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~-------~~~~~~i~~~~~~~~~  253 (322)
T d1vzoa_         181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE-------KNSQAEISRRILKSEP  253 (322)
T ss_dssp             GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS-------CCCHHHHHHHHHHCCC
T ss_pred             ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHHhcccCCC
Confidence            332 223456799999999998764  468899999999999999999999874321       1111122222222222


Q ss_pred             CCCchhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 045493         1008 PPPLGEVEEKLKSMIAVAFLCLDANPDCRP-----TMQKVCN 1044 (1048)
Q Consensus      1008 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 1044 (1048)
                      +.+    .....++.+++.+||++||++||     |++|+++
T Consensus       254 ~~~----~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         254 PYP----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             CCC----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             CCc----ccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            221    12345688899999999999999     5888876


No 59 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-38  Score=355.10  Aligned_cols=258  Identities=19%  Similarity=0.247  Sum_probs=183.7

Q ss_pred             CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcc-cchhhHHHHHHhhcccCceeeEeeEeee------CCeEE
Q 045493          778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEI-GINQKGFVSEITEIRHRNIVKFYGFCSH------TQHLF  849 (1048)
Q Consensus       778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~------~~~~~  849 (1048)
                      +.....||+|+||+||+|++. +++.||||++........ .....+++..+++++|||||+++++|..      ..+.|
T Consensus        19 Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~   98 (355)
T d2b1pa1          19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY   98 (355)
T ss_dssp             EEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred             eEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeE
Confidence            344557999999999999987 689999999976543322 1234466777788999999999999853      46889


Q ss_pred             EEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecccccccc
Q 045493          850 LVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFL  929 (1048)
Q Consensus       850 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~  929 (1048)
                      +||||+.++.+. .+.     ..+++..++.++.|++.||+|||+.   ||+||||||+|||++.++.+|++|||+++..
T Consensus        99 iv~Ey~~~~l~~-~~~-----~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~  169 (355)
T d2b1pa1          99 LVMELMDANLCQ-VIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_dssp             EEEECCSEEHHH-HHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             EEEeccchHHHH-hhh-----cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhcc
Confidence            999999875554 442     2378999999999999999999999   9999999999999999999999999998865


Q ss_pred             CCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccC---------CCccc--ccchhh
Q 045493          930 KPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLS---------LPAPA--ANMNIV  998 (1048)
Q Consensus       930 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~---------~~~~~--~~~~~~  998 (1048)
                      ... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...+....         .+...  ......
T Consensus       170 ~~~-~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (355)
T d2b1pa1         170 GTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT  248 (355)
T ss_dssp             ------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHH
T ss_pred             ccc-cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhh
Confidence            432 334556799999999999999999999999999999999999999864321100         00000  000000


Q ss_pred             hhhhc----------------cCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493          999 VNDLI----------------DSRLPPPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus       999 ~~~~~----------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
                      .....                ....+...........++.+++.+|++.||++||||+|++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            01000                111122222334567789999999999999999999999863


No 60 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=1.4e-38  Score=352.23  Aligned_cols=251  Identities=18%  Similarity=0.221  Sum_probs=186.4

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhcc-cCceeeEeeEeee--CCeEEEEEEcc
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-HRNIVKFYGFCSH--TQHLFLVYEYL  855 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~e~~  855 (1048)
                      ....||+|+||+||+|++. +++.||||+++...    .....+|+..++.++ ||||+++++++..  ....++||||+
T Consensus        39 i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~  114 (328)
T d3bqca1          39 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV  114 (328)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECC
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH----HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeec
Confidence            3456899999999999985 68889999986432    223456677778885 9999999999874  45689999999


Q ss_pred             CCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC-ceEEeccccccccCCCCC
Q 045493          856 ERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY-KAHVSDFGTAKFLKPDSS  934 (1048)
Q Consensus       856 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~-~~kl~DfG~a~~~~~~~~  934 (1048)
                      ++|+|.++.+      .+++..++.++.||+.||+|||++   +||||||||+|||++.++ .+|++|||+|+...+. .
T Consensus       115 ~~~~L~~~~~------~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~-~  184 (328)
T d3bqca1         115 NNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG-Q  184 (328)
T ss_dssp             CSCBGGGTTT------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT-C
T ss_pred             CCCcHHHHhc------CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceeccCC-C
Confidence            9999977642      388999999999999999999999   999999999999998765 6999999999876543 2


Q ss_pred             CccccccccccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCcccccccCCCc-----------------ccccch
Q 045493          935 NWSELAGTCGYIAPELAYTMR-ANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLPA-----------------PAANMN  996 (1048)
Q Consensus       935 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~-----------------~~~~~~  996 (1048)
                      .....++|+.|+|||.+.+.. ++.++||||+||++|||++|+.||...........                 ......
T Consensus       185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~  264 (328)
T d3bqca1         185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD  264 (328)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred             cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccC
Confidence            345567999999999987654 79999999999999999999999854221000000                 000000


Q ss_pred             hhhhhhccCCCC------CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493          997 IVVNDLIDSRLP------PPLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus       997 ~~~~~~~~~~~~------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      ............      ...........++.+++.+||+.||++|||++|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             GGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            000000000000      000011223456889999999999999999999986


No 61 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.1e-38  Score=349.57  Aligned_cols=257  Identities=18%  Similarity=0.226  Sum_probs=185.3

Q ss_pred             CcceeeecccccccEEEEEEc-CCCceeeEEeccCCCCc-ccchhhHHHHHHhhcccCceeeEeeEeeeC-----CeEEE
Q 045493          778 EGKMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGE-IGINQKGFVSEITEIRHRNIVKFYGFCSHT-----QHLFL  850 (1048)
Q Consensus       778 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~-----~~~~l  850 (1048)
                      +.....||+|+||+||+|++. +++.||||++....... ......++++.+++++|||||++++++...     ...++
T Consensus        20 Y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~   99 (348)
T d2gfsa1          20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY   99 (348)
T ss_dssp             EEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCE
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEE
Confidence            344567899999999999875 68999999987543322 112334567778899999999999998532     34466


Q ss_pred             EEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEeccccccccC
Q 045493          851 VYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDFGTAKFLK  930 (1048)
Q Consensus       851 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~  930 (1048)
                      ||+|+.+|+|.++++..    .+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.+|++|||.|....
T Consensus       100 i~~~~~gg~L~~~~~~~----~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~  172 (348)
T d2gfsa1         100 LVTHLMGADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTD  172 (348)
T ss_dssp             EEEECCSEEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCT
T ss_pred             EEEeecCCchhhhcccc----cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccC
Confidence            77888899999999542    489999999999999999999999   99999999999999999999999999997543


Q ss_pred             CCCCCccccccccccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCccccccc---------CCCccc---ccchh
Q 045493          931 PDSSNWSELAGTCGYIAPELAYTMR-ANEKCDVFNFGVLVLEVIEGKHPGHFLSLLL---------SLPAPA---ANMNI  997 (1048)
Q Consensus       931 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---------~~~~~~---~~~~~  997 (1048)
                         .......||+.|+|||...+.. ++.++||||+||++|+|++|+.||...+...         ..+...   .....
T Consensus       173 ---~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  249 (348)
T d2gfsa1         173 ---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE  249 (348)
T ss_dssp             ---GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCH
T ss_pred             ---cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccch
Confidence               2334567899999999877654 6899999999999999999999986432110         000000   00000


Q ss_pred             hhhhhcc--CCCCCC-c-hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 045493          998 VVNDLID--SRLPPP-L-GEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCN 1044 (1048)
Q Consensus       998 ~~~~~~~--~~~~~~-~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1044 (1048)
                      .......  ...+.. . .........+.+++.+|++.||++||||+|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            0000000  011100 0 001122356789999999999999999999987


No 62 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.8e-33  Score=316.29  Aligned_cols=259  Identities=16%  Similarity=0.184  Sum_probs=180.1

Q ss_pred             ceeeecccccccEEEEEEc-CCCceeeEEeccCCCCcccchhhHHHHHHhhc-----------ccCceeeEeeEeee--C
Q 045493          780 KMVLHGTGGCGTVYKAELT-SGDTRAVKKLHSLPTGEIGINQKGFVSEITEI-----------RHRNIVKFYGFCSH--T  845 (1048)
Q Consensus       780 ~~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l-----------~h~niv~~~~~~~~--~  845 (1048)
                      -...||+|+||+||+|++. +++.||||+++.....  .....+++..++.+           .|+||+++++++..  .
T Consensus        17 i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~--~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~   94 (362)
T d1q8ya_          17 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY--TEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP   94 (362)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHH--HHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccc--hHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccc
Confidence            3557899999999999985 7899999998653211  11223344444433           47899999998854  4


Q ss_pred             CeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCC------ceE
Q 045493          846 QHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEY------KAH  919 (1048)
Q Consensus       846 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~------~~k  919 (1048)
                      ...+++|+++..+..............+++..+..++.||+.|++|||+..  +|+||||||+|||++.++      .++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~--~IvHrDlKp~NIll~~~~~~~~~~~~k  172 (362)
T d1q8ya_          95 NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIK  172 (362)
T ss_dssp             TEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred             cceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc--CcccccCChhHeeeeccCcccccceee
Confidence            566777777766554444433444556888999999999999999999832  899999999999998665      399


Q ss_pred             EeccccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCcccccccCCC----------
Q 045493          920 VSDFGTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVLEVIEGKHPGHFLSLLLSLP----------  989 (1048)
Q Consensus       920 l~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~----------  989 (1048)
                      ++|||.|......   ....+||+.|+|||++.+..++.++||||+||+++||++|+.||..........          
T Consensus       173 l~dfg~s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~  249 (362)
T d1q8ya_         173 IADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE  249 (362)
T ss_dssp             ECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred             Eeecccccccccc---cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHH
Confidence            9999999865432   244679999999999999999999999999999999999999986432211000          


Q ss_pred             ------cccccchhhhhhhcc-----CCCCC------------CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 045493          990 ------APAANMNIVVNDLID-----SRLPP------------PLGEVEEKLKSMIAVAFLCLDANPDCRPTMQKVCNL 1045 (1048)
Q Consensus       990 ------~~~~~~~~~~~~~~~-----~~~~~------------~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1045 (1048)
                            ..............+     .....            ...........+.+++.+|++.||++||||+|+++.
T Consensus       250 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         250 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             HhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                  000000000000000     00000            001124556789999999999999999999999863


No 63 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.96  E-value=1.3e-29  Score=278.34  Aligned_cols=258  Identities=31%  Similarity=0.521  Sum_probs=220.5

Q ss_pred             ccceeEecCCccccC--cccccCCCCCCCeeeCcC-CcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEE
Q 045493          449 SLYSLRLERNQLTGN--ISEVFGIYPDLELLDLSN-NNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKL  525 (1048)
Q Consensus       449 ~L~~L~L~~n~l~~~--~~~~~~~~~~L~~L~Ls~-n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L  525 (1048)
                      ++++|+|++|.+++.  .+..++.+++|++|+|++ |++++.+|..+.++++|++|+|++|++.+..+..+..++.|+.+
T Consensus        51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l  130 (313)
T d1ogqa_          51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL  130 (313)
T ss_dssp             CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred             EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence            466677777766653  356677777788888875 77877788888888888888888888888888888888889999


Q ss_pred             EcccCcccCCcCccccCCCccCEEeecCccccCCCcccccccccc-ceeecccCcccccccccccccccccccccccccc
Q 045493          526 DFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAEL-GYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQF  604 (1048)
Q Consensus       526 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l  604 (1048)
                      ++++|++.+.+|..+..++.|+++++++|.+++.+|..+..+..+ +.+++++|++++..|..+..+..+ .+++++|.+
T Consensus       131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~  209 (313)
T d1ogqa_         131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNML  209 (313)
T ss_dssp             ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEE
T ss_pred             ccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence            999998888888888889999999999999888888888887775 889999999998888888776554 689999999


Q ss_pred             cchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCCCcc
Q 045493          605 SQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIPHSK  684 (1048)
Q Consensus       605 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p~~~  684 (1048)
                      .+..+..+..+++|+.|++++|.+.+.++ .+..+++|++|+|++|+++|.+|..|.++++|++|||++|+++|.+|...
T Consensus       210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~  288 (313)
T d1ogqa_         210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG  288 (313)
T ss_dssp             EECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred             ccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcc
Confidence            88888888899999999999999987654 68889999999999999999999999999999999999999999999888


Q ss_pred             cccccccccccCCccccCCCCCCCCC
Q 045493          685 AFQNATIEAFQGNKELCGDVTGLPPC  710 (1048)
Q Consensus       685 ~~~~~~~~~~~~n~~lc~~~~~~~~c  710 (1048)
                      .++.+....+.||+.+||.+  .|+|
T Consensus       289 ~L~~L~~l~l~~N~~l~g~p--lp~c  312 (313)
T d1ogqa_         289 NLQRFDVSAYANNKCLCGSP--LPAC  312 (313)
T ss_dssp             TGGGSCGGGTCSSSEEESTT--SSCC
T ss_pred             cCCCCCHHHhCCCccccCCC--CCCC
Confidence            88888888999999999975  4677


No 64 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.96  E-value=2e-27  Score=269.40  Aligned_cols=344  Identities=23%  Similarity=0.329  Sum_probs=245.7

Q ss_pred             CCCCCCcEEEccCceeecccccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccccCcChhhhccCCCcE
Q 045493          301 GNLKSLSHLWLSKTQLSGFIPPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLNGSIPHCLGNLSNLKF  380 (1048)
Q Consensus       301 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~  380 (1048)
                      ..+.+|++|+++++.|+..  +.+..+++|+.|++++|.+++. + .++.+++|++|++++|++.+..  .++++++|+.
T Consensus        41 ~~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~  114 (384)
T d2omza2          41 TDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIADIT--PLANLTNLTG  114 (384)
T ss_dssp             HHHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCE
T ss_pred             HHhCCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCCC-c-cccCCccccccccccccccccc--cccccccccc
Confidence            3456777777777777643  3566777777777777777643 2 3777777888888887776443  2677777788


Q ss_pred             EEeecccccCCchhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCcc
Q 045493          381 FALRENELSGSIPQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQL  460 (1048)
Q Consensus       381 L~L~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l  460 (1048)
                      |++++|.+++..+  ......+.......|.+....+.................     ....+...+.........|..
T Consensus       115 L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  187 (384)
T d2omza2         115 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT-----DLKPLANLTTLERLDISSNKV  187 (384)
T ss_dssp             EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCC-----CCGGGTTCTTCCEEECCSSCC
T ss_pred             ccccccccccccc--ccccccccccccccccccccccccccccccccccccccc-----hhhhhcccccccccccccccc
Confidence            8777777764433  233445556666666655443332222222222222111     122344444445555555544


Q ss_pred             ccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccc
Q 045493          461 TGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQL  540 (1048)
Q Consensus       461 ~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~  540 (1048)
                      .  ....+..+++++.+++++|.+++..+  +..+++|++|++++|.+++.  ..+..+++|+.|++++|++++..  .+
T Consensus       188 ~--~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~--~~  259 (384)
T d2omza2         188 S--DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLA--PL  259 (384)
T ss_dssp             C--CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG--GG
T ss_pred             c--cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCC--cc
Confidence            3  23455677888999999998876644  45678899999999998743  36788899999999999988644  37


Q ss_pred             cCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCe
Q 045493          541 GKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSK  620 (1048)
Q Consensus       541 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~  620 (1048)
                      ..+++|++|++++|++++..  .+..++.++.++++.|+++++  ..+..+++++.|++++|+|+++.  .+..+++|++
T Consensus       260 ~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~  333 (384)
T d2omza2         260 SGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQR  333 (384)
T ss_dssp             TTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCE
T ss_pred             cccccCCEeeccCcccCCCC--ccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCE
Confidence            78899999999999998543  477888899999999999875  45788899999999999998864  3788999999


Q ss_pred             EECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccce
Q 045493          621 LDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNE  675 (1048)
Q Consensus       621 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~  675 (1048)
                      |++++|+|++ ++ .+.++++|++|++++|+|++..|  +..+++|++|++++|.
T Consensus       334 L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~Na  384 (384)
T d2omza2         334 LFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQA  384 (384)
T ss_dssp             EECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCEE
T ss_pred             EECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCCc
Confidence            9999999984 33 68889999999999999997765  7889999999999983


No 65 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.96  E-value=2.9e-29  Score=275.56  Aligned_cols=263  Identities=32%  Similarity=0.455  Sum_probs=219.4

Q ss_pred             eecCCCCCCCCCccEEeCCCCcccc--cccccccCCCCCCEeeCCC-CccccCCCcCCCCCCCCcEEeCCCCcCCCCCcc
Q 045493           14 TLQEFPFLLFPQLAYLDLSVNQLFG--TIPTQISHLSKLKHLDFST-NQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPE   90 (1048)
Q Consensus        14 ~~~~~p~~~~~~l~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~-n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~   90 (1048)
                      +++.-+-....++++|||++|++++  .+|.+++.|++|++|+|++ |.++|.+|.+|+.+++|++|+|++|++++..+.
T Consensus        40 gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~  119 (313)
T d1ogqa_          40 GVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD  119 (313)
T ss_dssp             TEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCG
T ss_pred             CeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccc
Confidence            3333333344579999999999987  4789999999999999986 889989999999999999999999999999999


Q ss_pred             ccccccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCC-cEEecCCC
Q 045493           91 ELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESP-VSVSLHTN  169 (1048)
Q Consensus        91 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L-~~l~l~~n  169 (1048)
                      .+..++.|+.+++++|++...+|.+|++++.|+.+++++|.+.+.+|               ..+..+..+ +.+.++.|
T Consensus       120 ~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip---------------~~~~~l~~l~~~l~~~~n  184 (313)
T d1ogqa_         120 FLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP---------------DSYGSFSKLFTSMTISRN  184 (313)
T ss_dssp             GGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECC---------------GGGGCCCTTCCEEECCSS
T ss_pred             cccchhhhcccccccccccccCchhhccCcccceeeccccccccccc---------------cccccccccccccccccc
Confidence            99999999999999999999999999999999999999999886544               455556665 67888899


Q ss_pred             ccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCc
Q 045493          170 NFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPP  249 (1048)
Q Consensus       170 ~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~  249 (1048)
                      ++++..|..+..+..+ .++++++...+.+|..+..+++|++|++++|.+.+.+ +.++.+++|++|+|++|++++.+|.
T Consensus       185 ~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~-~~~~~~~~L~~L~Ls~N~l~g~iP~  262 (313)
T d1ogqa_         185 RLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQ  262 (313)
T ss_dssp             EEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG-GGCCCCTTCCEEECCSSCCEECCCG
T ss_pred             cccccccccccccccc-ccccccccccccccccccccccccccccccccccccc-cccccccccccccCccCeecccCCh
Confidence            9998888888887655 6888888888888888888999999999999888554 4678888999999999999888888


Q ss_pred             ccccccccceeecccccccCCCchhhhccchhhhhhhccccccCC
Q 045493          250 KLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSG  294 (1048)
Q Consensus       250 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~  294 (1048)
                      .|+++++|++|+|++|+++|.+|. ++.+++|+.+++.+++.+.|
T Consensus       263 ~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g  306 (313)
T d1ogqa_         263 GLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCG  306 (313)
T ss_dssp             GGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEES
T ss_pred             HHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCccccC
Confidence            899999999999999998877774 56777777777776444444


No 66 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95  E-value=4.7e-27  Score=266.21  Aligned_cols=82  Identities=22%  Similarity=0.311  Sum_probs=41.8

Q ss_pred             CCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCccccccccccee
Q 045493          181 GLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYL  260 (1048)
Q Consensus       181 ~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L  260 (1048)
                      .+.+|++|++++++|+.+  ..+..+++|++|+|++|++++. | .++++++|++|++++|.+++..  .++.+++|+.|
T Consensus        42 ~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L  115 (384)
T d2omza2          42 DLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIADIT--PLANLTNLTGL  115 (384)
T ss_dssp             HHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCEE
T ss_pred             HhCCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCCC-c-cccCCccccccccccccccccc--ccccccccccc
Confidence            344555555555555432  2345555555555555555532 2 2555555555555555555322  25555555555


Q ss_pred             eccccccc
Q 045493          261 YLSHNQLN  268 (1048)
Q Consensus       261 ~L~~n~l~  268 (1048)
                      ++++|.++
T Consensus       116 ~~~~~~~~  123 (384)
T d2omza2         116 TLFNNQIT  123 (384)
T ss_dssp             ECCSSCCC
T ss_pred             cccccccc
Confidence            55555544


No 67 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.94  E-value=3.6e-26  Score=249.70  Aligned_cols=284  Identities=24%  Similarity=0.300  Sum_probs=211.9

Q ss_pred             EEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCC
Q 045493            3 SINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVN   82 (1048)
Q Consensus         3 ~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n   82 (1048)
                      .|++++.+    ++++|..+++++++|||++|+|+++.+.+|..+++|++|++++|+++.+.|.+|..+++|++|++++|
T Consensus        14 ~~~C~~~~----L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n   89 (305)
T d1xkua_          14 VVQCSDLG----LEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN   89 (305)
T ss_dssp             EEECTTSC----CCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred             EEEecCCC----CCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence            35666544    57788888899999999999999777778999999999999999999888999999999999999999


Q ss_pred             cCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCc
Q 045493           83 QLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPV  162 (1048)
Q Consensus        83 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~  162 (1048)
                      +|+.+ |..+  ...++.|++++|.+..+.+..+.....+..++...|......             ..+..+..+++|+
T Consensus        90 ~l~~l-~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~-------------~~~~~~~~l~~L~  153 (305)
T d1xkua_          90 QLKEL-PEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG-------------IENGAFQGMKKLS  153 (305)
T ss_dssp             CCSBC-CSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG-------------BCTTGGGGCTTCC
T ss_pred             ccCcC-ccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccC-------------CCccccccccccC
Confidence            99975 4432  357888999999999777777888888999998888654211             1234456677777


Q ss_pred             EEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCc
Q 045493          163 SVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNR  242 (1048)
Q Consensus       163 ~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~  242 (1048)
                      .+.+.+|.++.. |..  .+++|+.|++++|.+++..+..|..++.+++|++++|.+.+..+..+.++++|++|+|++|+
T Consensus       154 ~l~l~~n~l~~l-~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~  230 (305)
T d1xkua_         154 YIRIADTNITTI-PQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK  230 (305)
T ss_dssp             EEECCSSCCCSC-CSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSC
T ss_pred             ccccccCCcccc-Ccc--cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccc
Confidence            888888877754 332  25677788888888777777777788888888888888877667777777888888888888


Q ss_pred             cCCCCCcccccccccceeecccccccCCCchhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceee--ccc
Q 045493          243 LSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLS--GFI  320 (1048)
Q Consensus       243 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~  320 (1048)
                      |+ .+|..|..+++|++|+|++|+|+.+....|..                   +.....+.+|+.|+|++|.++  ...
T Consensus       231 L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~-------------------~~~~~~~~~L~~L~L~~N~~~~~~~~  290 (305)
T d1xkua_         231 LV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCP-------------------PGYNTKKASYSGVSLFSNPVQYWEIQ  290 (305)
T ss_dssp             CS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSC-------------------SSCCTTSCCCSEEECCSSSSCGGGSC
T ss_pred             cc-ccccccccccCCCEEECCCCccCccChhhccC-------------------cchhcccCCCCEEECCCCcCccCcCC
Confidence            77 45667777888888888888777443333321                   223345567888888888765  233


Q ss_pred             ccccccccc
Q 045493          321 PPSLGNLSN  329 (1048)
Q Consensus       321 ~~~~~~l~~  329 (1048)
                      |..|..+..
T Consensus       291 ~~~f~~~~~  299 (305)
T d1xkua_         291 PSTFRCVYV  299 (305)
T ss_dssp             GGGGTTCCC
T ss_pred             HhHhccccc
Confidence            444444433


No 68 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=1.5e-25  Score=241.82  Aligned_cols=223  Identities=26%  Similarity=0.278  Sum_probs=162.3

Q ss_pred             EEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCC-CC
Q 045493            4 INLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLS-VN   82 (1048)
Q Consensus         4 ~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls-~n   82 (1048)
                      |.++..+    ++++|..+++.+++|||++|+|+++.+.+|..+++|++|++++|++..+.+..+..+..++.++.+ .|
T Consensus        16 v~c~~~~----L~~iP~~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~   91 (284)
T d1ozna_          16 TSCPQQG----LQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA   91 (284)
T ss_dssp             EECCSSC----CSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred             EEcCCCC----CCccCCCCCCCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccc
Confidence            5565544    668888888899999999999987777889999999999999999998888888889999998764 56


Q ss_pred             cCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCc
Q 045493           83 QLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPV  162 (1048)
Q Consensus        83 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~  162 (1048)
                      .++++.+.+|.++++|++|++++|.+....+..++...+|+.+++++|.+++                            
T Consensus        92 ~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~----------------------------  143 (284)
T d1ozna_          92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA----------------------------  143 (284)
T ss_dssp             TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC----------------------------
T ss_pred             ccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccc----------------------------
Confidence            7888778888888888888888888887777778888888888888887763                            


Q ss_pred             EEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCc
Q 045493          163 SVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNR  242 (1048)
Q Consensus       163 ~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~  242 (1048)
                                 +.+..|..+++|+.|++++|+++++.+.+|.++++|+++++++|++.+..|..|.++++|++|++++|+
T Consensus       144 -----------i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~  212 (284)
T d1ozna_         144 -----------LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN  212 (284)
T ss_dssp             -----------CCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred             -----------cChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccc
Confidence                       233445555566666666666655555566666666666666666665555666666666666666666


Q ss_pred             cCCCCCcccccccccceeecccccccC
Q 045493          243 LSGYIPPKLGSFKSLLYLYLSHNQLNG  269 (1048)
Q Consensus       243 l~~~~p~~~~~l~~L~~L~L~~n~l~~  269 (1048)
                      +.+..+..|+.+++|++|++++|++..
T Consensus       213 i~~~~~~~~~~~~~L~~L~l~~N~l~C  239 (284)
T d1ozna_         213 LSALPTEALAPLRALQYLRLNDNPWVC  239 (284)
T ss_dssp             CSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred             cccccccccccccccCEEEecCCCCCC
Confidence            665555556666666666666666553


No 69 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.93  E-value=6.8e-25  Score=239.49  Aligned_cols=246  Identities=22%  Similarity=0.272  Sum_probs=143.7

Q ss_pred             cccEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEec
Q 045493          425 SLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMG  504 (1048)
Q Consensus       425 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~  504 (1048)
                      .+++|++++|+|+...+.+|.++++|++|++++|.+..+.+..|..++.|+.|++++|+++.....   ..+.++.|.+.
T Consensus        32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~---~~~~l~~L~~~  108 (305)
T d1xkua_          32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEK---MPKTLQELRVH  108 (305)
T ss_dssp             TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSS---CCTTCCEEECC
T ss_pred             CCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcCccc---hhhhhhhhhcc
Confidence            344555555555444444555555555555555555555555555555555555555555433221   12345555555


Q ss_pred             CcccCcccCccccccCCCcEEEcccCccc--CCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccc
Q 045493          505 GNEISGTIPSEIGNMTQLHKLDFSSNRLV--GQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSK  582 (1048)
Q Consensus       505 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~  582 (1048)
                      +|.+.+..+..+.....+..++...|...  ...+..|..+++|+.+++++|.++ .+|..  .+++|+.|++++|.++.
T Consensus       109 ~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~--~~~~L~~L~l~~n~~~~  185 (305)
T d1xkua_         109 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQG--LPPSLTELHLDGNKITK  185 (305)
T ss_dssp             SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSS--CCTTCSEEECTTSCCCE
T ss_pred             ccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-ccCcc--cCCccCEEECCCCcCCC
Confidence            55555544444555555556665555432  223345555666666666666665 33332  24566666666666666


Q ss_pred             cccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccc--
Q 045493          583 LIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCF--  660 (1048)
Q Consensus       583 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~--  660 (1048)
                      ..+..|..++.++.|++++|+++++.+..+..+++|++|+|++|+|+ .+|..|..+++|++|+|++|+|+......|  
T Consensus       186 ~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~  264 (305)
T d1xkua_         186 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCP  264 (305)
T ss_dssp             ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSC
T ss_pred             CChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCccChhhccC
Confidence            66666666666666666666666666666666777777777777776 456667777777777777777765443333  


Q ss_pred             ----cccCCccEEEeccceec
Q 045493          661 ----RRMHGLSSIDVSYNELQ  677 (1048)
Q Consensus       661 ----~~l~~L~~l~ls~N~l~  677 (1048)
                          ..++.|+.|++++|+|+
T Consensus       265 ~~~~~~~~~L~~L~L~~N~~~  285 (305)
T d1xkua_         265 PGYNTKKASYSGVSLFSNPVQ  285 (305)
T ss_dssp             SSCCTTSCCCSEEECCSSSSC
T ss_pred             cchhcccCCCCEEECCCCcCc
Confidence                34566777777777774


No 70 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91  E-value=1.8e-24  Score=233.28  Aligned_cols=209  Identities=23%  Similarity=0.246  Sum_probs=125.3

Q ss_pred             CCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcc-cCcccCCcCccccCCCccCEEee
Q 045493          473 DLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFS-SNRLVGQIPKQLGKLTSLTSLTL  551 (1048)
Q Consensus       473 ~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls-~N~l~~~~~~~~~~l~~L~~L~L  551 (1048)
                      ++++|+|++|+|+...+..|.++++|++|++++|.+....+..+..++.++.++.+ .|.++...+..|.++++|++|++
T Consensus        33 ~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l  112 (284)
T d1ozna_          33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL  112 (284)
T ss_dssp             TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred             CCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEec
Confidence            34455555555544444445555555555555555554444555555555555443 34444444555555566666666


Q ss_pred             cCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCc
Q 045493          552 NGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGN  631 (1048)
Q Consensus       552 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~  631 (1048)
                      ++|.+....+..+....+|+.+++++|+|+.+++..|..+++|+.|++++|+|+.+.+..|.++++|+.+++++|++++.
T Consensus       113 ~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i  192 (284)
T d1ozna_         113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV  192 (284)
T ss_dssp             TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred             CCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhcccccc
Confidence            66665544455555556666666666666665555666666666666666666666666666666666666666666666


Q ss_pred             CCcCcCCccccCeEECCCCcccCCccccccccCCccEEEeccceecCCCC
Q 045493          632 IPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSYNELQGSIP  681 (1048)
Q Consensus       632 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~p  681 (1048)
                      .|..|..+++|++|++++|.+++..+..|..+++|++|++++|+|.+.++
T Consensus       193 ~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~  242 (284)
T d1ozna_         193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR  242 (284)
T ss_dssp             CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred             ChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCcc
Confidence            66666666777777777777766666666667777777777777766554


No 71 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89  E-value=1.1e-22  Score=216.57  Aligned_cols=198  Identities=28%  Similarity=0.287  Sum_probs=109.9

Q ss_pred             ccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcc
Q 045493          449 SLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFS  528 (1048)
Q Consensus       449 ~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls  528 (1048)
                      .+.+++.+++.++.++....   +++++|+|++|+|++..+..|.++++|++|+|++|+|+.. + .++.+++|++|+|+
T Consensus        11 ~~~~v~C~~~~L~~iP~~lp---~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~Ls   85 (266)
T d1p9ag_          11 SHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTLDLS   85 (266)
T ss_dssp             TCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEEECC
T ss_pred             CCeEEEccCCCCCeeCcCcC---cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-c-cccccccccccccc
Confidence            33444555555554433221   3455555555555544445555555555555555555522 2 23456666666666


Q ss_pred             cCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchh
Q 045493          529 SNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEI  608 (1048)
Q Consensus       529 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~  608 (1048)
                      +|++++ .+..+..+++|+.|++++|.+.+..+..+..+.++++|++++|.++.+.+..+..+++|+.|++++|+|+++.
T Consensus        86 ~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~  164 (266)
T d1p9ag_          86 HNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELP  164 (266)
T ss_dssp             SSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCC
T ss_pred             cccccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccC
Confidence            666653 3445556666666666666666555555556666666666666666555555555555555555555555555


Q ss_pred             hhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCccc
Q 045493          609 SIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLS  653 (1048)
Q Consensus       609 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~  653 (1048)
                      +..|..+++|++|||++|+|+ .+|..+..+++|+.|+|++|++.
T Consensus       165 ~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~  208 (266)
T d1p9ag_         165 AGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL  208 (266)
T ss_dssp             TTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred             ccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence            555555555555555555555 45555555555555555555554


No 72 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88  E-value=2.1e-22  Score=214.19  Aligned_cols=198  Identities=26%  Similarity=0.287  Sum_probs=141.6

Q ss_pred             CccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccccccccc
Q 045493           25 QLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALS  104 (1048)
Q Consensus        25 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~  104 (1048)
                      ...+.|.++++|+ .+|..+.  +++++|+|++|+|+++.+++|.++++|++|+|++|+|+.+ | .+..+++|++|+++
T Consensus        11 ~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~Ls   85 (266)
T d1p9ag_          11 SHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTLDLS   85 (266)
T ss_dssp             TCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEEECC
T ss_pred             CCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-c-cccccccccccccc
Confidence            3445577777777 4555554  4677777777777766556677777777777777777753 2 34566667777777


Q ss_pred             ceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCC
Q 045493          105 YNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKN  184 (1048)
Q Consensus       105 ~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~  184 (1048)
                      +|+++ ..+..+.++++|+.|++++|++.                                       +..+..+..+.+
T Consensus        86 ~N~l~-~~~~~~~~l~~L~~L~l~~~~~~---------------------------------------~~~~~~~~~l~~  125 (266)
T d1p9ag_          86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLT---------------------------------------SLPLGALRGLGE  125 (266)
T ss_dssp             SSCCS-SCCCCTTTCTTCCEEECCSSCCC---------------------------------------CCCSSTTTTCTT
T ss_pred             ccccc-ccccccccccccccccccccccc---------------------------------------eeeccccccccc
Confidence            77666 34556666666666666666554                                       344556677778


Q ss_pred             cceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeeccc
Q 045493          185 LTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSH  264 (1048)
Q Consensus       185 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~  264 (1048)
                      ++.|++++|.++.+.+..+..+++|++|++++|++++..+..|..+++|++|+|++|+|+ .+|+.+..+++|+.|+|++
T Consensus       126 l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~  204 (266)
T d1p9ag_         126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHG  204 (266)
T ss_dssp             CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCS
T ss_pred             cccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecC
Confidence            888888888887777777777888888888888888666667788888888888888888 6777777788888888888


Q ss_pred             cccc
Q 045493          265 NQLN  268 (1048)
Q Consensus       265 n~l~  268 (1048)
                      |++.
T Consensus       205 Np~~  208 (266)
T d1p9ag_         205 NPWL  208 (266)
T ss_dssp             CCBC
T ss_pred             CCCC
Confidence            8765


No 73 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.82  E-value=4.7e-21  Score=192.39  Aligned_cols=169  Identities=15%  Similarity=0.118  Sum_probs=114.4

Q ss_pred             eeeecccccccEEEEEEcCCCceeeEEeccCCCCcc---------c--------chhhHHHHHHhhcccCceeeEeeEee
Q 045493          781 MVLHGTGGCGTVYKAELTSGDTRAVKKLHSLPTGEI---------G--------INQKGFVSEITEIRHRNIVKFYGFCS  843 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~---------~--------~~~~~~~~~l~~l~h~niv~~~~~~~  843 (1048)
                      ...||+|+||+||+|+..+|++||||.++.......         .        .....+...+.++.|.+++..+++..
T Consensus         5 g~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~~   84 (191)
T d1zara2           5 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEG   84 (191)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEET
T ss_pred             CCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEecC
Confidence            356899999999999998899999998753211100         0        00112344456778999988876642


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCeEeeCCCCCCeEECCCCceEEecc
Q 045493          844 HTQHLFLVYEYLERGSLATILSNEATAAELDWSKRVNVIKGVANALSYMHHDCFPPILHRDISSKKVLLDLEYKAHVSDF  923 (1048)
Q Consensus       844 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dik~~NIll~~~~~~kl~Df  923 (1048)
                          .++||||++++.+.+          ++...+..++.|+++|++|||+.   +|+||||||+|||++++ .++++||
T Consensus        85 ----~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~liDF  146 (191)
T d1zara2          85 ----NAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWIIDF  146 (191)
T ss_dssp             ----TEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEECCC
T ss_pred             ----CEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEEEC
Confidence                279999998864422          44556678999999999999999   99999999999999865 5899999


Q ss_pred             ccccccCCCCCCccccccccccccccccccCCCCchhhHHHHHHHHH
Q 045493          924 GTAKFLKPDSSNWSELAGTCGYIAPELAYTMRANEKCDVFNFGVLVL  970 (1048)
Q Consensus       924 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gvvl~  970 (1048)
                      |.|......... ......... -.|. ..+.|+.++||||..--+.
T Consensus       147 G~a~~~~~~~~~-~~l~rd~~~-~~~~-f~r~y~~~~d~~s~~~~~~  190 (191)
T d1zara2         147 PQSVEVGEEGWR-EILERDVRN-IITY-FSRTYRTEKDINSAIDRIL  190 (191)
T ss_dssp             TTCEETTSTTHH-HHHHHHHHH-HHHH-HHHHHCCCCCHHHHHHHHH
T ss_pred             CCcccCCCCCcH-HHHHHHHHH-HHHH-HcCCCCCcccHHHHHHHHh
Confidence            999765322110 000000000 0121 2356788999999865443


No 74 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.81  E-value=9e-19  Score=194.67  Aligned_cols=200  Identities=29%  Similarity=0.299  Sum_probs=134.3

Q ss_pred             CCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCccccccccccccccc
Q 045493           24 PQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELAL  103 (1048)
Q Consensus        24 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l  103 (1048)
                      .++++|||++|+|+ .+|+.   +++|++|+|++|+|+ .+|+.   +.+|+.|++++|+++.+ ++ +.  +.|++|++
T Consensus        38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~l-~~-lp--~~L~~L~L  105 (353)
T d1jl5a_          38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKAL-SD-LP--PLLEYLGV  105 (353)
T ss_dssp             HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCC-CS-CC--TTCCEEEC
T ss_pred             cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccchh-hh-hc--cccccccc
Confidence            47889999999998 56653   468999999999998 67765   45788999999999864 32 21  46899999


Q ss_pred             cceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCC
Q 045493          104 SYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLK  183 (1048)
Q Consensus       104 ~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~  183 (1048)
                      ++|.+. .+|. ++.+++|+.|++++|.+....                ..   ...+..+.+..+...  ....+..++
T Consensus       106 ~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~----------------~~---~~~l~~l~~~~~~~~--~~~~l~~l~  162 (353)
T d1jl5a_         106 SNNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLP----------------DL---PPSLEFIAAGNNQLE--ELPELQNLP  162 (353)
T ss_dssp             CSSCCS-SCCC-CTTCTTCCEEECCSSCCSCCC----------------CC---CTTCCEEECCSSCCS--SCCCCTTCT
T ss_pred             cccccc-cccc-hhhhccceeeccccccccccc----------------cc---cccccchhhcccccc--ccccccccc
Confidence            999998 4553 678999999999998876321                11   223444555444433  345567777


Q ss_pred             CcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeecc
Q 045493          184 NLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLS  263 (1048)
Q Consensus       184 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~  263 (1048)
                      .++.|++++|.+.. .+.   .....+.+..+.+.+. .++ .+..++.|+.+++++|... ..+..   ..++..+.+.
T Consensus       163 ~l~~L~l~~n~~~~-~~~---~~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~-~~~~~---~~~l~~~~~~  232 (353)
T d1jl5a_         163 FLTAIYADNNSLKK-LPD---LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK-TLPDL---PPSLEALNVR  232 (353)
T ss_dssp             TCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCS-SCCSC---CTTCCEEECC
T ss_pred             cceecccccccccc-ccc---cccccccccccccccc-ccc-ccccccccccccccccccc-ccccc---cccccccccc
Confidence            88888888877763 222   2233455666665554 333 3566777888888877766 33332   3456666666


Q ss_pred             ccccc
Q 045493          264 HNQLN  268 (1048)
Q Consensus       264 ~n~l~  268 (1048)
                      ++.+.
T Consensus       233 ~~~~~  237 (353)
T d1jl5a_         233 DNYLT  237 (353)
T ss_dssp             SSCCS
T ss_pred             ccccc
Confidence            66654


No 75 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.80  E-value=3.2e-18  Score=190.13  Aligned_cols=296  Identities=28%  Similarity=0.328  Sum_probs=189.5

Q ss_pred             EEEEecCCcceeeecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCC
Q 045493            2 VSINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSV   81 (1048)
Q Consensus         2 ~~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~   81 (1048)
                      ++++|++++++ .+|+    .++++++|+|++|+|+ .+|+.   +.+|+.|++++|+++. ++.   -...|++|++++
T Consensus        41 ~~LdLs~~~L~-~lp~----~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~-l~~---lp~~L~~L~L~~  107 (353)
T d1jl5a_          41 HELELNNLGLS-SLPE----LPPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKA-LSD---LPPLLEYLGVSN  107 (353)
T ss_dssp             SEEECTTSCCS-CCCS----CCTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CCS---CCTTCCEEECCS
T ss_pred             CEEEeCCCCCC-CCCC----CCCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccch-hhh---hccccccccccc
Confidence            57888888774 3444    4589999999999999 66755   4579999999999984 443   235799999999


Q ss_pred             CcCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCC
Q 045493           82 NQLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESP  161 (1048)
Q Consensus        82 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L  161 (1048)
                      |+++.+ |. +..+++|++|++++|.+.. .+..   ...+..+.+..+...                 .+..+..+..+
T Consensus       108 n~l~~l-p~-~~~l~~L~~L~l~~~~~~~-~~~~---~~~l~~l~~~~~~~~-----------------~~~~l~~l~~l  164 (353)
T d1jl5a_         108 NQLEKL-PE-LQNSSFLKIIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLE-----------------ELPELQNLPFL  164 (353)
T ss_dssp             SCCSSC-CC-CTTCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-----------------SCCCCTTCTTC
T ss_pred             cccccc-cc-hhhhccceeeccccccccc-cccc---cccccchhhcccccc-----------------ccccccccccc
Confidence            999965 54 6889999999999999984 3433   456677777766543                 12456778888


Q ss_pred             cEEecCCCccccccCCCCCCCCCcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCC
Q 045493          162 VSVSLHTNNFSGVIPRSLGGLKNLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDN  241 (1048)
Q Consensus       162 ~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N  241 (1048)
                      +.+.+..|.......    .....+.+...++.+. ..+ .+..++.|+.+++++|... ..+.   ...++..+.+.++
T Consensus       165 ~~L~l~~n~~~~~~~----~~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~-~~~~---~~~~l~~~~~~~~  234 (353)
T d1jl5a_         165 TAIYADNNSLKKLPD----LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK-TLPD---LPPSLEALNVRDN  234 (353)
T ss_dssp             CEEECCSSCCSSCCC----CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCS-SCCS---CCTTCCEEECCSS
T ss_pred             eeccccccccccccc----cccccccccccccccc-ccc-ccccccccccccccccccc-cccc---ccccccccccccc
Confidence            999999998875422    2334566777777765 333 4678999999999999887 3443   3467899999999


Q ss_pred             ccCCCCCcccccccccceeecccccccCCCchhhhccc-hhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeeccc
Q 045493          242 RLSGYIPPKLGSFKSLLYLYLSHNQLNGSLPSSFGNLS-SLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGFI  320 (1048)
Q Consensus       242 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~L~-~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~  320 (1048)
                      .+.. .+..   ...+...++..+.+.+.     ..++ .....++.. +    .++.....+++|++|++++|+++. +
T Consensus       235 ~~~~-~~~~---~~~l~~~~~~~~~~~~l-----~~l~~~~~~~~~~~-~----~~~~~~~~~~~L~~L~Ls~N~l~~-l  299 (353)
T d1jl5a_         235 YLTD-LPEL---PQSLTFLDVSENIFSGL-----SELPPNLYYLNASS-N----EIRSLCDLPPSLEELNVSNNKLIE-L  299 (353)
T ss_dssp             CCSC-CCCC---CTTCCEEECCSSCCSEE-----SCCCTTCCEEECCS-S----CCSEECCCCTTCCEEECCSSCCSC-C
T ss_pred             cccc-cccc---ccccccccccccccccc-----ccccchhccccccc-C----ccccccccCCCCCEEECCCCccCc-c
Confidence            9873 3333   34555666655544311     0000 001111111 1    122222334566666666666653 3


Q ss_pred             ccccccccccceeeeccccccCCCCcchhccCCCCeEeccCCccc
Q 045493          321 PPSLGNLSNIRGLYIRENMLYGSIPEELGRLKSLSQLSLSVNKLN  365 (1048)
Q Consensus       321 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~  365 (1048)
                      |.   .+++|+.|++++|.++ .+|+.   +.+|++|++++|+++
T Consensus       300 p~---~~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~  337 (353)
T d1jl5a_         300 PA---LPPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR  337 (353)
T ss_dssp             CC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS
T ss_pred             cc---ccCCCCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC
Confidence            32   2345555555555554 23322   234555555555554


No 76 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78  E-value=1.4e-21  Score=226.17  Aligned_cols=111  Identities=21%  Similarity=0.198  Sum_probs=62.1

Q ss_pred             cccceeecccccccCCC-chhhhccchhhhhhhccccccCCCCCcccCCCCCCcEEEccCceeecc----cccccccccc
Q 045493          255 KSLLYLYLSHNQLNGSL-PSSFGNLSSLKHLHVHNINKLSGSIPKEIGNLKSLSHLWLSKTQLSGF----IPPSLGNLSN  329 (1048)
Q Consensus       255 ~~L~~L~L~~n~l~~~~-p~~~~~L~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~  329 (1048)
                      .+|++||+++|+++... ...+..                         +++++.|+|++|.++..    +...+..+++
T Consensus         2 ~~l~~ld~~~~~i~~~~~~~l~~~-------------------------l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~   56 (460)
T d1z7xw1           2 LDIQSLDIQCEELSDARWAELLPL-------------------------LQQCQVVRLDDCGLTEARCKDISSALRVNPA   56 (460)
T ss_dssp             EEEEEEEEESCCCCHHHHHHHHHH-------------------------HTTCSEEEEESSCCCHHHHHHHHHHHHTCTT
T ss_pred             CCCCEEEeeCCcCChHHHHHHHHh-------------------------CCCCCEEEeCCCCCCHHHHHHHHHHHhcCCC
Confidence            36888899888886311 112222                         34555666666655421    2233445566


Q ss_pred             cceeeeccccccCCC----Ccchh-ccCCCCeEeccCCccccC----cChhhhccCCCcEEEeecccccC
Q 045493          330 IRGLYIRENMLYGSI----PEELG-RLKSLSQLSLSVNKLNGS----IPHCLGNLSNLKFFALRENELSG  390 (1048)
Q Consensus       330 L~~L~l~~n~l~~~~----~~~~~-~l~~L~~L~Ls~N~l~~~----~~~~l~~l~~L~~L~L~~n~l~~  390 (1048)
                      |+.|+|++|.++...    .+.+. ...+|++|+|++|++++.    ++..+..+++|++|++++|.++.
T Consensus        57 L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~  126 (460)
T d1z7xw1          57 LAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD  126 (460)
T ss_dssp             CCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred             CCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence            666666666554211    11111 124677777777777643    23455667777777777777763


No 77 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78  E-value=4.2e-19  Score=185.91  Aligned_cols=210  Identities=18%  Similarity=0.136  Sum_probs=112.7

Q ss_pred             ecCCCCCCCCCccEEeCCCCcccccccccccCCCCCCEeeCCCCcccc-CCCcCCCCCCCCcEEeCCC-CcCCCCCcccc
Q 045493           15 LQEFPFLLFPQLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSG-IIPPQIGILTNLVVLRLSV-NQLNGLIPEEL   92 (1048)
Q Consensus        15 ~~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~-~~p~~~~~l~~L~~L~ls~-n~l~~~~~~~~   92 (1048)
                      ++++|...++++++|||++|+|+.+.+..|.++++|++|+|++|.+.. +.+.+|..++++++|++.+ |++....+..|
T Consensus        20 l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~   99 (242)
T d1xwdc1          20 VTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAF   99 (242)
T ss_dssp             CSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSE
T ss_pred             CCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccc
Confidence            455665566666667666666665555566666666666666666653 2344566666666666543 45555555555


Q ss_pred             ccccccccccccceecccccCc-CcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCcc
Q 045493           93 GELTSLNELALSYNRLNGSIPA-SLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNF  171 (1048)
Q Consensus        93 ~~l~~L~~L~l~~n~~~~~~~~-~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~  171 (1048)
                      .++++|++|++++|++....+. .+..+..|..+..+++.                                       +
T Consensus       100 ~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~---------------------------------------l  140 (242)
T d1xwdc1         100 QNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNIN---------------------------------------I  140 (242)
T ss_dssp             ECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTT---------------------------------------C
T ss_pred             cccccccccccchhhhcccccccccccccccccccccccc---------------------------------------c
Confidence            5556666666665555422111 12222333333333333                                       3


Q ss_pred             ccccCCCCCCCC-CcceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcc
Q 045493          172 SGVIPRSLGGLK-NLTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPK  250 (1048)
Q Consensus       172 ~~~~~~~~~~l~-~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~  250 (1048)
                      ..+.+..|.++. .++.|++++|+++.+.+..|.....++.+++++|+++...+..|.++++|++|+|++|+++...+..
T Consensus       141 ~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~  220 (242)
T d1xwdc1         141 HTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG  220 (242)
T ss_dssp             CEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSS
T ss_pred             ccccccccccccccceeeecccccccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHH
Confidence            333334444443 5666666666666444443333222333455666666433344666666666666666666444445


Q ss_pred             cccccccceeecc
Q 045493          251 LGSFKSLLYLYLS  263 (1048)
Q Consensus       251 ~~~l~~L~~L~L~  263 (1048)
                      |.++++|+.+++.
T Consensus       221 ~~~l~~L~~l~~~  233 (242)
T d1xwdc1         221 LENLKKLRARSTY  233 (242)
T ss_dssp             CTTCCEEESSSEE
T ss_pred             HcCCcccccCcCC
Confidence            6666666665554


No 78 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78  E-value=2.6e-21  Score=223.97  Aligned_cols=374  Identities=17%  Similarity=0.154  Sum_probs=246.5

Q ss_pred             CCcEEEccCceeeccc-ccccccccccceeeeccccccC----CCCcchhccCCCCeEeccCCccccCcChhhhc-----
Q 045493          305 SLSHLWLSKTQLSGFI-PPSLGNLSNIRGLYIRENMLYG----SIPEELGRLKSLSQLSLSVNKLNGSIPHCLGN-----  374 (1048)
Q Consensus       305 ~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-----  374 (1048)
                      +|+.||+++|++++.. ...+..+++++.|+|++|.++.    .+...+..+++|++|||++|+|+......+..     
T Consensus         3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~   82 (460)
T d1z7xw1           3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP   82 (460)
T ss_dssp             EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred             CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence            6899999999998643 3346678999999999998763    23445677899999999999986432223322     


Q ss_pred             cCCCcEEEeecccccCC----chhhhhhhcccceeeccccccCCCCCcccc-----cCCcccEEEeecccccCCC----C
Q 045493          375 LSNLKFFALRENELSGS----IPQEIENMKKLNKYLLFENQFTGYLPQNVC-----QSGSLTHFSVRNNNFVGPI----P  441 (1048)
Q Consensus       375 l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~-----~~~~L~~L~l~~N~l~~~~----~  441 (1048)
                      ..+|+.|+|++|++++.    ++..+..++.|+.|++++|+++......+.     ..............+....    .
T Consensus        83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (460)
T d1z7xw1          83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA  162 (460)
T ss_dssp             TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred             CCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhcccc
Confidence            35799999999999753    345667788999999999987643221111     1122333333333322111    1


Q ss_pred             CCcccccccceeEecCCccccCccc----cc-CCCCCCCeeeCcCCcccCcc----cccccCCCCccEEEecCcccCcc-
Q 045493          442 RSLQNCTSLYSLRLERNQLTGNISE----VF-GIYPDLELLDLSNNNFFGEI----SSNWIKCPQLATLNMGGNEISGT-  511 (1048)
Q Consensus       442 ~~l~~l~~L~~L~L~~n~l~~~~~~----~~-~~~~~L~~L~Ls~n~l~~~~----~~~~~~~~~L~~L~L~~N~i~~~-  511 (1048)
                      ..+.....++.+.++.+.+......    .+ ........+++.++.+....    ...+...+.++.+++++|.+... 
T Consensus       163 ~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~  242 (460)
T d1z7xw1         163 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG  242 (460)
T ss_dssp             HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccc
Confidence            1233456677888887766432111    11 12234667788877765432    22344567888999998887532 


Q ss_pred             ----cCccccccCCCcEEEcccCcccCC----cCccccCCCccCEEeecCccccCCCcccc-----ccccccceeecccC
Q 045493          512 ----IPSEIGNMTQLHKLDFSSNRLVGQ----IPKQLGKLTSLTSLTLNGNQLSGDIPLEL-----GLLAELGYLDLSAN  578 (1048)
Q Consensus       512 ----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N  578 (1048)
                          ..........++.+++++|.+...    ....+...+.++.+++++|.++......+     .....|+.+++++|
T Consensus       243 ~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~  322 (460)
T d1z7xw1         243 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC  322 (460)
T ss_dssp             HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred             cchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccc
Confidence                223344567899999999987632    22344567889999999998874322222     23457899999999


Q ss_pred             cccccccccc----cccccccccccccccccchhhhhhc-----cccccCeEECCCCcccCc----CCcCcCCccccCeE
Q 045493          579 RLSKLIPKNL----GELRKLHHLNLSNNQFSQEISIQIG-----KLVQLSKLDLSHNSLGGN----IPSEICNLESLEYM  645 (1048)
Q Consensus       579 ~l~~~~~~~l----~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L  645 (1048)
                      .++......+    ...++|++|+|++|+|++.+...+.     ..+.|++|+|++|+|++.    ++..+..+++|++|
T Consensus       323 ~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L  402 (460)
T d1z7xw1         323 SFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLREL  402 (460)
T ss_dssp             CCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEE
T ss_pred             chhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEE
Confidence            8886544444    3456899999999999876554442     356699999999999753    23345566889999


Q ss_pred             ECCCCcccCCcccccc-----ccCCccEEEeccceecC
Q 045493          646 NLLQNKLSGPIPSCFR-----RMHGLSSIDVSYNELQG  678 (1048)
Q Consensus       646 ~L~~N~l~~~~~~~~~-----~l~~L~~l~ls~N~l~~  678 (1048)
                      +|++|+|+..+...+.     ....|+.|++++|.+..
T Consensus       403 ~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~  440 (460)
T d1z7xw1         403 DLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE  440 (460)
T ss_dssp             ECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred             ECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCH
Confidence            9999999865554443     22368999999988864


No 79 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77  E-value=1.3e-18  Score=182.02  Aligned_cols=218  Identities=14%  Similarity=0.116  Sum_probs=110.2

Q ss_pred             cEEEeecccccCCCCCCcccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCc-ccccccCCCCccEEEecC
Q 045493          427 THFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGE-ISSNWIKCPQLATLNMGG  505 (1048)
Q Consensus       427 ~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~-~~~~~~~~~~L~~L~L~~  505 (1048)
                      +.++.++++++ .+|..+.  +++++|++++|+|+.++..+|..+++|++|++++|.+... .+..|..+++++++.+..
T Consensus        11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~   87 (242)
T d1xwdc1          11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK   87 (242)
T ss_dssp             SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred             CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence            45666666666 3343332  3566666666666666666666666666666666666543 234555566666665543


Q ss_pred             -cccCcccCccccccCCCcEEEcccCcccCCcCc-cccCCCccCEEeecCccccCCCcccccccc-ccceeecccCcccc
Q 045493          506 -NEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPK-QLGKLTSLTSLTLNGNQLSGDIPLELGLLA-ELGYLDLSANRLSK  582 (1048)
Q Consensus       506 -N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~  582 (1048)
                       |.+....+..|.++++|++|++++|++....+. .+..+..++.+..+++.+....+..|..++ .++.|++++|+++.
T Consensus        88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~  167 (242)
T d1xwdc1          88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE  167 (242)
T ss_dssp             CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred             cccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccc
Confidence             455555555566666666666666665532221 122334444444444455433333343332 44455555555554


Q ss_pred             cccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccc
Q 045493          583 LIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRR  662 (1048)
Q Consensus       583 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~  662 (1048)
                      +.+..|.....++.++                        +++|+|+...+..|.++++|++|+|++|+|+...+..|..
T Consensus       168 i~~~~~~~~~l~~~~~------------------------l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~  223 (242)
T d1xwdc1         168 IHNCAFNGTQLDELNL------------------------SDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN  223 (242)
T ss_dssp             ECTTTTTTCCEEEEEC------------------------TTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTT
T ss_pred             cccccccchhhhcccc------------------------ccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcC
Confidence            4333333222222233                        4444454333334455555555555555555444444555


Q ss_pred             cCCccEEEe
Q 045493          663 MHGLSSIDV  671 (1048)
Q Consensus       663 l~~L~~l~l  671 (1048)
                      ++.|+++++
T Consensus       224 l~~L~~l~~  232 (242)
T d1xwdc1         224 LKKLRARST  232 (242)
T ss_dssp             CCEEESSSE
T ss_pred             CcccccCcC
Confidence            555554444


No 80 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.76  E-value=4.5e-19  Score=177.90  Aligned_cols=127  Identities=25%  Similarity=0.352  Sum_probs=104.2

Q ss_pred             EEEecCCcceeeecCCCCCCCCCccEEeCCCCcccc-cccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCC
Q 045493            3 SINLTGSNLKGTLQEFPFLLFPQLAYLDLSVNQLFG-TIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSV   81 (1048)
Q Consensus         3 ~~~~~~~~~~~~~~~~p~~~~~~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~   81 (1048)
                      .|++++.++    +++|..+++++++|+|++|+|++ ..+..|+.+++|++|+|++|+++.+.+.+|..+.+|++|+|++
T Consensus        12 ~v~Cs~~~L----~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~   87 (192)
T d1w8aa_          12 TVDCTGRGL----KEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE   87 (192)
T ss_dssp             EEECTTSCC----SSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred             EEEEeCCCc----CccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence            466776655    46777777888888888888875 4467778888888888888888888888888888888888888


Q ss_pred             CcCCCCCccccccccccccccccceecccccCcCcCCcCCCceEEeeccccc
Q 045493           82 NQLNGLIPEELGELTSLNELALSYNRLNGSIPASLGNLSNLVQLSLSNNSLS  133 (1048)
Q Consensus        82 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~L~~L~~L~l~~n~l~  133 (1048)
                      |+|+.+.|++|.++++|++|+|++|+|+++.|++|..+++|++|+|++|++.
T Consensus        88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~  139 (192)
T d1w8aa_          88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN  139 (192)
T ss_dssp             CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred             ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence            8888888888888888888888888888888888888888888888888775


No 81 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75  E-value=1.8e-18  Score=178.84  Aligned_cols=186  Identities=23%  Similarity=0.322  Sum_probs=110.1

Q ss_pred             CCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEe
Q 045493          471 YPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLT  550 (1048)
Q Consensus       471 ~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~  550 (1048)
                      +.+|+.|++++|+|+..  ..+..+++|++|++++|.|++..+  +..+++|+++++++|.++..  ..+.++++|+.++
T Consensus        40 l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i--~~l~~l~~L~~l~  113 (227)
T d1h6ua2          40 LDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLD  113 (227)
T ss_dssp             HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEE
T ss_pred             cCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccccc--ccccccccccccc
Confidence            34455555555555432  234555555555555555553322  55556666666666655522  2355566666666


Q ss_pred             ecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccC
Q 045493          551 LNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGG  630 (1048)
Q Consensus       551 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~  630 (1048)
                      +++|...+.  ..+...+.++.++++.+.+...  ..+...++|+.|++++|.+++..  .++.+++|++|||++|++++
T Consensus       114 l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~  187 (227)
T d1h6ua2         114 LTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD  187 (227)
T ss_dssp             CTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC
T ss_pred             ccccccccc--chhccccchhhhhchhhhhchh--hhhccccccccccccccccccch--hhcccccceecccCCCccCC
Confidence            666655432  2344555666666666666543  23555666777777777665433  25667777777777777764


Q ss_pred             cCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEec
Q 045493          631 NIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVS  672 (1048)
Q Consensus       631 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls  672 (1048)
                      .  ..++.+++|++|+|++|+|++..|  +..++.|++|+++
T Consensus       188 l--~~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls  225 (227)
T d1h6ua2         188 I--SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT  225 (227)
T ss_dssp             C--GGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred             C--hhhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence            2  236777777888888777775443  6677778887776


No 82 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75  E-value=3e-18  Score=177.08  Aligned_cols=188  Identities=22%  Similarity=0.304  Sum_probs=105.6

Q ss_pred             ccccccceeEecCCccccCcccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCcccCcccCccccccCCCcE
Q 045493          445 QNCTSLYSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHK  524 (1048)
Q Consensus       445 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~  524 (1048)
                      +.+.+|++|++.+|.|+.+.  .+..+++|+.|++++|++++..+  +..+++++.+++++|.++..  ..++.+++|+.
T Consensus        38 ~~l~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i--~~l~~l~~L~~  111 (227)
T d1h6ua2          38 ADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT  111 (227)
T ss_dssp             HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred             HHcCCcCEEECCCCCCCcch--hHhcCCCCcEeecCCceeecccc--cccccccccccccccccccc--ccccccccccc
Confidence            34445555555555554431  24445555555555555544322  45555555555555555522  23555666666


Q ss_pred             EEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccc
Q 045493          525 LDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQF  604 (1048)
Q Consensus       525 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l  604 (1048)
                      ++++++...+.  ..+...+.++.+.++++.+...  ..+...++|++|++++|+++..  ..++.+++|+.|+|++|++
T Consensus       112 l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l  185 (227)
T d1h6ua2         112 LDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKI  185 (227)
T ss_dssp             EECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred             ccccccccccc--chhccccchhhhhchhhhhchh--hhhccccccccccccccccccc--hhhcccccceecccCCCcc
Confidence            66666655432  2344555666666666665532  2345556666666666666543  2356666666666666666


Q ss_pred             cchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECC
Q 045493          605 SQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLL  648 (1048)
Q Consensus       605 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~  648 (1048)
                      +++.  .++.+++|++|+|++|+|++..  .+.++++|++|+++
T Consensus       186 ~~l~--~l~~l~~L~~L~Ls~N~lt~i~--~l~~l~~L~~L~ls  225 (227)
T d1h6ua2         186 SDIS--PLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLT  225 (227)
T ss_dssp             CCCG--GGGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEE
T ss_pred             CCCh--hhcCCCCCCEEECcCCcCCCCc--ccccCCCCCEEEee
Confidence            6543  2566677777777777776432  26677777777765


No 83 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.73  E-value=9.4e-19  Score=175.48  Aligned_cols=172  Identities=25%  Similarity=0.284  Sum_probs=80.8

Q ss_pred             EEEecCcccCcccCccccccCCCcEEEcccCcccC-CcCccccCCCccCEEeecCccccCCCccccccccccceeecccC
Q 045493          500 TLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVG-QIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSAN  578 (1048)
Q Consensus       500 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N  578 (1048)
                      +++.+++.++ .+|..+.  +.+++|+|++|+|++ ..+..|.++++|++|+|++|.++...+..|..+++|++|+|++|
T Consensus        12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N   88 (192)
T d1w8aa_          12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN   88 (192)
T ss_dssp             EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred             EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence            4444444444 3333221  345555555555543 22344455555555555555555444555555555555555555


Q ss_pred             cccccccccccccccccccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccc
Q 045493          579 RLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPS  658 (1048)
Q Consensus       579 ~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~  658 (1048)
                      +|+.+.+.+|.++++|++|+|++|+|+.+.+..|..+++|++|+|++|.+..... ...-...++.+.+..|.++...|.
T Consensus        89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~-~~~~~~~l~~~~l~~~~~~c~~p~  167 (192)
T d1w8aa_          89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAARCGAPS  167 (192)
T ss_dssp             CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG-GHHHHHHHHHHCCSGGGCBBCSST
T ss_pred             cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccc-hHHHhhhhhhhcccCCCeEeCCCh
Confidence            5555555555555555555555555555444455555555555555555442111 111112234444455555444443


Q ss_pred             cccccCCccEEEeccceecC
Q 045493          659 CFRRMHGLSSIDVSYNELQG  678 (1048)
Q Consensus       659 ~~~~l~~L~~l~ls~N~l~~  678 (1048)
                      .+   ..++.++++.|.+.+
T Consensus       168 ~l---~~~~l~~L~~n~l~C  184 (192)
T d1w8aa_         168 KV---RDVQIKDLPHSEFKC  184 (192)
T ss_dssp             TT---TTSBGGGSCTTTCCC
T ss_pred             hh---cCCEeeecCHhhCcC
Confidence            32   223344455554443


No 84 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71  E-value=2.8e-18  Score=174.61  Aligned_cols=185  Identities=28%  Similarity=0.381  Sum_probs=119.9

Q ss_pred             CccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccccccccc
Q 045493           25 QLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALS  104 (1048)
Q Consensus        25 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~  104 (1048)
                      ++....++.+.+++.++.  ..+.+|++|++++|.|+.. + ++..+++|++|+|++|+|+++.  .+..+++|++|+++
T Consensus        25 ~~i~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~   98 (210)
T d1h6ta2          25 ETIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLD   98 (210)
T ss_dssp             HHHHHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECC
T ss_pred             HHHHHHhCcCccCCccCH--HHhcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCcc--ccccCccccccccc
Confidence            334456677777655442  2456677888888887743 2 4777778888888888777643  35677777777777


Q ss_pred             ceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCC
Q 045493          105 YNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKN  184 (1048)
Q Consensus       105 ~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~  184 (1048)
                      +|+++. +| .+..+++|+.|++++|.+..                                         ...+..+++
T Consensus        99 ~n~i~~-l~-~l~~l~~L~~L~l~~~~~~~-----------------------------------------~~~l~~l~~  135 (210)
T d1h6ta2          99 ENKVKD-LS-SLKDLKKLKSLSLEHNGISD-----------------------------------------INGLVHLPQ  135 (210)
T ss_dssp             SSCCCC-GG-GGTTCTTCCEEECTTSCCCC-----------------------------------------CGGGGGCTT
T ss_pred             cccccc-cc-cccccccccccccccccccc-----------------------------------------ccccccccc
Confidence            777763 33 46677777777777765431                                         123555666


Q ss_pred             cceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCcccccccccceeeccc
Q 045493          185 LTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYLYLSH  264 (1048)
Q Consensus       185 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~  264 (1048)
                      |+.+++++|.+++  +..+..+++|+++++++|++++ ++ .++++++|++|+|++|+++. +| .+.++++|++|+|++
T Consensus       136 l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~  209 (210)
T d1h6ta2         136 LESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS  209 (210)
T ss_dssp             CCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred             ccccccccccccc--cccccccccccccccccccccc-cc-cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence            7777777777653  3345667777777777777763 32 26677777777777777763 43 467777777777653


No 85 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71  E-value=3.1e-17  Score=166.76  Aligned_cols=146  Identities=25%  Similarity=0.361  Sum_probs=74.0

Q ss_pred             ccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccccccc
Q 045493          516 IGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLH  595 (1048)
Q Consensus       516 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~  595 (1048)
                      +..+++|++|+|++|+|++..  .++.+++|+.|++++|++++ ++ .+..+++|+.|++++|.+..+  ..+..++.|+
T Consensus        64 l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~~~--~~l~~l~~l~  137 (210)
T d1h6ta2          64 IQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLE  137 (210)
T ss_dssp             GGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCC
T ss_pred             HhhCCCCCEEeCCCccccCcc--ccccCccccccccccccccc-cc-ccccccccccccccccccccc--cccccccccc
Confidence            334444444444444444321  23444444555554444442 22 344445555555555544432  2344455555


Q ss_pred             ccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEEEecc
Q 045493          596 HLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSIDVSY  673 (1048)
Q Consensus       596 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ls~  673 (1048)
                      .+++++|.+++.  ..+..+++|+++++++|++++. + .+.++++|++|+|++|+|+.. + .+..+++|++|++++
T Consensus       138 ~l~~~~n~l~~~--~~~~~l~~L~~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~Ls~  209 (210)
T d1h6ta2         138 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFS  209 (210)
T ss_dssp             EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEE
T ss_pred             cccccccccccc--cccccccccccccccccccccc-c-cccCCCCCCEEECCCCCCCCC-h-hhcCCCCCCEEEccC
Confidence            555555555432  2344556666666666666532 2 255666666666666666532 2 366666666666653


No 86 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71  E-value=5.3e-18  Score=171.03  Aligned_cols=181  Identities=29%  Similarity=0.398  Sum_probs=106.0

Q ss_pred             CccEEeCCCCcccccccccccCCCCCCEeeCCCCccccCCCcCCCCCCCCcEEeCCCCcCCCCCcccccccccccccccc
Q 045493           25 QLAYLDLSVNQLFGTIPTQISHLSKLKHLDFSTNQFSGIIPPQIGILTNLVVLRLSVNQLNGLIPEELGELTSLNELALS  104 (1048)
Q Consensus        25 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~  104 (1048)
                      ++..++++.+++++.++  ...+.++++|++++|.|+. + +.+..+++|++|++++|++++..|  |.++++|++|+++
T Consensus        19 ~~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~   92 (199)
T d2omxa2          19 EKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMN   92 (199)
T ss_dssp             HHHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred             HHHHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc--ccCCccccccccc
Confidence            33445666666665433  2345667777777777763 3 346667777777777777775432  6666677777777


Q ss_pred             ceecccccCcCcCCcCCCceEEeecccccCccCCCCCcccCCCCCCCCccCCCCCCCcEEecCCCccccccCCCCCCCCC
Q 045493          105 YNRLNGSIPASLGNLSNLVQLSLSNNSLSGQIPPNWGYLISPHYGSIPQDLGNLESPVSVSLHTNNFSGVIPRSLGGLKN  184 (1048)
Q Consensus       105 ~n~~~~~~~~~~~~L~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~l~l~~n~~~~~~~~~~~~l~~  184 (1048)
                      +|.+... + .++++++|+.|++++|....                                       .  +.+..+++
T Consensus        93 ~n~~~~~-~-~l~~l~~L~~L~l~~~~~~~---------------------------------------~--~~~~~l~~  129 (199)
T d2omxa2          93 NNQIADI-T-PLANLTNLTGLTLFNNQITD---------------------------------------I--DPLKNLTN  129 (199)
T ss_dssp             SSCCCCC-G-GGTTCTTCSEEECCSSCCCC---------------------------------------C--GGGTTCTT
T ss_pred             ccccccc-c-cccccccccccccccccccc---------------------------------------c--cccchhhh
Confidence            6666532 2 36666666666666665431                                       1  12445566


Q ss_pred             cceeeccccCccccCCcccccccccceeccccccccccCCccCcCCCCCCeEeccCCccCCCCCccccccccccee
Q 045493          185 LTFVYLNNNRIVGSIPSEIGNLRSLSYLGLNKNQLSGSIPPTAGNLSNLKFLYLHDNRLSGYIPPKLGSFKSLLYL  260 (1048)
Q Consensus       185 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L  260 (1048)
                      |+.|++++|++.. + +.+..+++|++|++++|++++. + .++++++|++|++++|+++. ++ .++++++|+.|
T Consensus       130 L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L  199 (199)
T d2omxa2         130 LNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL  199 (199)
T ss_dssp             CSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred             hHHhhhhhhhhcc-c-ccccccccccccccccccccCC-c-cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence            6666666666652 2 2455666666666666666532 2 35566666666666666653 22 35555555554


No 87 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70  E-value=5.1e-17  Score=163.69  Aligned_cols=142  Identities=30%  Similarity=0.477  Sum_probs=68.8

Q ss_pred             ccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccccccc
Q 045493          516 IGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLH  595 (1048)
Q Consensus       516 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~  595 (1048)
                      +..+++|++|++++|++++..+  +.++++|++|++++|.+.. ++ .+..+++|+.|++++|.+...  ..+..+++|+
T Consensus        58 l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~  131 (199)
T d2omxa2          58 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLN  131 (199)
T ss_dssp             GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCS
T ss_pred             cccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-ccccccccccccccccccccc--cccchhhhhH
Confidence            3444444455555444443221  4444455555555554442 22 244445555555555544443  2244455555


Q ss_pred             ccccccccccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCccccccccCCccEE
Q 045493          596 HLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFRRMHGLSSI  669 (1048)
Q Consensus       596 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l  669 (1048)
                      .|++++|++....  .+..+++|+.|++++|++++.  ..+.++++|++|++++|+|++. + .+..+++|++|
T Consensus       132 ~L~l~~n~l~~~~--~l~~~~~L~~L~l~~n~l~~l--~~l~~l~~L~~L~ls~N~i~~i-~-~l~~L~~L~~L  199 (199)
T d2omxa2         132 RLELSSNTISDIS--ALSGLTSLQQLNFSSNQVTDL--KPLANLTTLERLDISSNKVSDI-S-VLAKLTNLESL  199 (199)
T ss_dssp             EEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEE
T ss_pred             Hhhhhhhhhcccc--cccccccccccccccccccCC--ccccCCCCCCEEECCCCCCCCC-c-cccCCCCCCcC
Confidence            5555555554322  344555555666666655532  1255566666666666666542 1 34555555543


No 88 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.56  E-value=2.3e-16  Score=174.11  Aligned_cols=236  Identities=20%  Similarity=0.216  Sum_probs=135.4

Q ss_pred             cccccccceeEecCCccccCc----ccccCCCCCCCeeeCcCCcccCc----------ccccccCCCCccEEEecCcccC
Q 045493          444 LQNCTSLYSLRLERNQLTGNI----SEVFGIYPDLELLDLSNNNFFGE----------ISSNWIKCPQLATLNMGGNEIS  509 (1048)
Q Consensus       444 l~~l~~L~~L~L~~n~l~~~~----~~~~~~~~~L~~L~Ls~n~l~~~----------~~~~~~~~~~L~~L~L~~N~i~  509 (1048)
                      +.....|++|+|++|.+....    ...+...++|+.++++++.....          ....+..+++|++|+|++|.++
T Consensus        27 L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~  106 (344)
T d2ca6a1          27 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFG  106 (344)
T ss_dssp             HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCC
T ss_pred             HhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccc
Confidence            444455555555555554221    22334455666666655443211          1222344566666666666665


Q ss_pred             cccC----ccccccCCCcEEEcccCcccCCcCcc-------------ccCCCccCEEeecCccccCC----Ccccccccc
Q 045493          510 GTIP----SEIGNMTQLHKLDFSSNRLVGQIPKQ-------------LGKLTSLTSLTLNGNQLSGD----IPLELGLLA  568 (1048)
Q Consensus       510 ~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~-------------~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~  568 (1048)
                      ....    ..+...++|+.|++++|.+.......             ....+.|+.+++++|.++..    +...+...+
T Consensus       107 ~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~  186 (344)
T d2ca6a1         107 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR  186 (344)
T ss_dssp             TTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCT
T ss_pred             cccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhh
Confidence            4322    22334566777777766654211111             12345677777777776632    223345566


Q ss_pred             ccceeecccCccccc-----ccccccccccccccccccccccchhh----hhhccccccCeEECCCCcccCcCCcCcC--
Q 045493          569 ELGYLDLSANRLSKL-----IPKNLGELRKLHHLNLSNNQFSQEIS----IQIGKLVQLSKLDLSHNSLGGNIPSEIC--  637 (1048)
Q Consensus       569 ~L~~L~Ls~N~l~~~-----~~~~l~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--  637 (1048)
                      .|++|+|++|+|+..     ....+..+++|+.|+|++|.++..+.    ..+..+++|++|+|++|.|++.....++  
T Consensus       187 ~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~  266 (344)
T d2ca6a1         187 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDA  266 (344)
T ss_dssp             TCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHH
T ss_pred             hhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHH
Confidence            777777777777632     23445667778888888887766543    3345677788888888887754333332  


Q ss_pred             ----CccccCeEECCCCcccCCcccc----cc-ccCCccEEEeccceecCC
Q 045493          638 ----NLESLEYMNLLQNKLSGPIPSC----FR-RMHGLSSIDVSYNELQGS  679 (1048)
Q Consensus       638 ----~l~~L~~L~L~~N~l~~~~~~~----~~-~l~~L~~l~ls~N~l~~~  679 (1048)
                          ..+.|++|++++|+|+......    +. +.+.|+.|++++|+++..
T Consensus       267 l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~  317 (344)
T d2ca6a1         267 FSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE  317 (344)
T ss_dssp             HHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred             hhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence                2356888888888886543332    32 457788888888887543


No 89 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.55  E-value=2.8e-16  Score=173.47  Aligned_cols=243  Identities=18%  Similarity=0.172  Sum_probs=154.9

Q ss_pred             hhhhhhhcccceeeccccccCCCCCcccccCCcccEEEeecccccCCCCCCcccccccceeEecCCccccC---------
Q 045493          393 PQEIENMKKLNKYLLFENQFTGYLPQNVCQSGSLTHFSVRNNNFVGPIPRSLQNCTSLYSLRLERNQLTGN---------  463 (1048)
Q Consensus       393 p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~---------  463 (1048)
                      ...+.+...++.|++++|++.......                    +...+...++|+.|+++++.....         
T Consensus        24 ~~~L~~~~~l~~L~Ls~n~i~~~~~~~--------------------l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~   83 (344)
T d2ca6a1          24 FAVLLEDDSVKEIVLSGNTIGTEAARW--------------------LSENIASKKDLEIAEFSDIFTGRVKDEIPEALR   83 (344)
T ss_dssp             SHHHHHCSCCCEEECTTSEECHHHHHH--------------------HHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH
T ss_pred             HHHHhhCCCCCEEECcCCcCCHHHHHH--------------------HHHHHHhCCCCCEEECCCCcccccccccchHHH
Confidence            344555666666666666654321111                    112334445555555555433211         


Q ss_pred             -cccccCCCCCCCeeeCcCCcccCcc----cccccCCCCccEEEecCcccCcccCcc-------------ccccCCCcEE
Q 045493          464 -ISEVFGIYPDLELLDLSNNNFFGEI----SSNWIKCPQLATLNMGGNEISGTIPSE-------------IGNMTQLHKL  525 (1048)
Q Consensus       464 -~~~~~~~~~~L~~L~Ls~n~l~~~~----~~~~~~~~~L~~L~L~~N~i~~~~~~~-------------~~~l~~L~~L  525 (1048)
                       ....+...++|+.|+|++|.++...    ...+..+++|++|++++|.++......             ....+.|+.+
T Consensus        84 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l  163 (344)
T d2ca6a1          84 LLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSI  163 (344)
T ss_dssp             HHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred             HHHHHHhhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCccccee
Confidence             1233445667777777777776542    223345677888888877765321111             1235678888


Q ss_pred             EcccCcccCCc----CccccCCCccCEEeecCccccCC-----CccccccccccceeecccCccccc----ccccccccc
Q 045493          526 DFSSNRLVGQI----PKQLGKLTSLTSLTLNGNQLSGD-----IPLELGLLAELGYLDLSANRLSKL----IPKNLGELR  592 (1048)
Q Consensus       526 ~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~-----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~l~~l~  592 (1048)
                      ++++|+++...    ...+...+.|++|+|++|.++..     +...+...++|+.|+|++|.++..    ....+..++
T Consensus       164 ~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~  243 (344)
T d2ca6a1         164 ICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP  243 (344)
T ss_dssp             ECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred             ecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccc
Confidence            88888876432    23345677888999998888732     234567778899999999988753    234567788


Q ss_pred             cccccccccccccchhhhhhc------cccccCeEECCCCcccCcCCc----CcC-CccccCeEECCCCcccCC
Q 045493          593 KLHHLNLSNNQFSQEISIQIG------KLVQLSKLDLSHNSLGGNIPS----EIC-NLESLEYMNLLQNKLSGP  655 (1048)
Q Consensus       593 ~L~~L~Ls~N~l~~~~~~~~~------~l~~L~~L~Ls~N~l~~~~~~----~~~-~l~~L~~L~L~~N~l~~~  655 (1048)
                      +|++|+|++|.|++.+...+.      ..+.|++||+++|+|+.....    .+. +.++|++|+|++|++...
T Consensus       244 ~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~  317 (344)
T d2ca6a1         244 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE  317 (344)
T ss_dssp             TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred             cchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence            999999999999887665553      246799999999998754322    232 467899999999999743


No 90 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54  E-value=2.2e-15  Score=145.17  Aligned_cols=111  Identities=20%  Similarity=0.219  Sum_probs=59.2

Q ss_pred             ccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccccccc
Q 045493          516 IGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLH  595 (1048)
Q Consensus       516 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~  595 (1048)
                      |.++.++++|||++|+|+. ++..+..+++|+.|+|++|+|+. + ..+..+++|++|++++|+|+.+.+..+..+++|+
T Consensus        14 ~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l-~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~   90 (162)
T d1a9na_          14 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT   90 (162)
T ss_dssp             EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred             ccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-c-CCcccCcchhhhhcccccccCCCccccccccccc
Confidence            4455566666666666663 34445556666666666666652 2 2355555666666666666555444444555555


Q ss_pred             ccccccccccchhh-hhhccccccCeEECCCCccc
Q 045493          596 HLNLSNNQFSQEIS-IQIGKLVQLSKLDLSHNSLG  629 (1048)
Q Consensus       596 ~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~  629 (1048)
                      +|++++|+|++... ..+..+++|++|++++|.++
T Consensus        91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~  125 (162)
T d1a9na_          91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT  125 (162)
T ss_dssp             EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred             cceeccccccccccccccccccccchhhcCCCccc
Confidence            55555555544322 23344444444444444443


No 91 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53  E-value=1.4e-15  Score=162.23  Aligned_cols=224  Identities=17%  Similarity=0.208  Sum_probs=136.2

Q ss_pred             ceeEecCCccccCcccccCCCCCCCeeeCcCCcccCc-ccccccCCCCccEEEecCcccCcccCccccccCCCcEEEccc
Q 045493          451 YSLRLERNQLTGNISEVFGIYPDLELLDLSNNNFFGE-ISSNWIKCPQLATLNMGGNEISGTIPSEIGNMTQLHKLDFSS  529 (1048)
Q Consensus       451 ~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~-~~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~  529 (1048)
                      ..+.+.+..+....... ....+|++||++++.++.. ....+..+++|++|++++|.+++..+..++.+++|++|++++
T Consensus        26 ~~lrl~~~~~~~~~~~~-~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~  104 (284)
T d2astb2          26 IAFRCPRSFMDQPLAEH-FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG  104 (284)
T ss_dssp             SEEECTTCEECSCCCSC-CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTT
T ss_pred             eEeeccccccccchhhh-ccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccc
Confidence            34445544444322222 2345788888888877654 234466778888888888888777777777788888888887


Q ss_pred             C-cccCCc-CccccCCCccCEEeecCc-cccCC-Ccccccc-ccccceeecccC--cccccc-ccccccccccccccccc
Q 045493          530 N-RLVGQI-PKQLGKLTSLTSLTLNGN-QLSGD-IPLELGL-LAELGYLDLSAN--RLSKLI-PKNLGELRKLHHLNLSN  601 (1048)
Q Consensus       530 N-~l~~~~-~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~-l~~L~~L~Ls~N--~l~~~~-~~~l~~l~~L~~L~Ls~  601 (1048)
                      + .+++.. ...+..+++|++|++++| .+++. +...+.. .++|+.|+++++  .++... ...+..+++|++|++++
T Consensus       105 c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~  184 (284)
T d2astb2         105 CSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSD  184 (284)
T ss_dssp             CBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTT
T ss_pred             cccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccccccccccccccccccccccccccc
Confidence            4 454322 122345778888888875 34421 1222322 357788888754  344321 22334567788888877


Q ss_pred             c-cccchhhhhhccccccCeEECCCC-cccCcCCcCcCCccccCeEECCCCcccCC-ccccccccCCccEEEeccceecC
Q 045493          602 N-QFSQEISIQIGKLVQLSKLDLSHN-SLGGNIPSEICNLESLEYMNLLQNKLSGP-IPSCFRRMHGLSSIDVSYNELQG  678 (1048)
Q Consensus       602 N-~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~l~ls~N~l~~  678 (1048)
                      | .+++.....+..+++|++|+|+++ .+++.....++++++|++|+++++ ++.. .+.....+|.|+   +..++++.
T Consensus       185 ~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L~---i~~~~ls~  260 (284)
T d2astb2         185 SVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQ---INCSHFTT  260 (284)
T ss_dssp             CTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSE---ESCCCSCC
T ss_pred             ccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC-CCHHHHHHHHHhCcccc---ccCccCCC
Confidence            5 466666667777778888888873 576666666777788888888777 3322 222223445443   45566554


Q ss_pred             C
Q 045493          679 S  679 (1048)
Q Consensus       679 ~  679 (1048)
                      .
T Consensus       261 ~  261 (284)
T d2astb2         261 I  261 (284)
T ss_dssp             T
T ss_pred             C
Confidence            4


No 92 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52  E-value=5.2e-15  Score=142.46  Aligned_cols=128  Identities=23%  Similarity=0.259  Sum_probs=81.0

Q ss_pred             ccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchhhhhhccccccC
Q 045493          540 LGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLS  619 (1048)
Q Consensus       540 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~  619 (1048)
                      |.+..++++|+|++|+|+ .++..+..+++|+.|||++|+|+.+  +.|..+++|++|++++|+|+.+.+..+..+++|+
T Consensus        14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~   90 (162)
T d1a9na_          14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT   90 (162)
T ss_dssp             EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred             ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccc
Confidence            455566677777777776 3455556666777777777777665  3466667777777777777666655566667777


Q ss_pred             eEECCCCcccCcC-CcCcCCccccCeEECCCCcccCCc---cccccccCCccEEE
Q 045493          620 KLDLSHNSLGGNI-PSEICNLESLEYMNLLQNKLSGPI---PSCFRRMHGLSSID  670 (1048)
Q Consensus       620 ~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~l~~L~~l~  670 (1048)
                      .|++++|+|+... ...+..+++|++|++++|+++...   +..+..+|+|++||
T Consensus        91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD  145 (162)
T d1a9na_          91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD  145 (162)
T ss_dssp             EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred             cceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence            7777777766422 134566677777777777765332   22456667777665


No 93 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.50  E-value=2.7e-14  Score=130.44  Aligned_cols=101  Identities=28%  Similarity=0.329  Sum_probs=48.1

Q ss_pred             EEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCccccccccccccccccccccccccc
Q 045493          524 KLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQ  603 (1048)
Q Consensus       524 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~  603 (1048)
                      +|+|++|+|+. ++ .+..+++|++|++++|+|+ .+|..++.+++|+.|++++|+|+.+                    
T Consensus         2 ~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l--------------------   58 (124)
T d1dcea3           2 VLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV--------------------   58 (124)
T ss_dssp             EEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC--------------------
T ss_pred             EEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc--------------------
Confidence            45555555542 22 2445555555555555554 3344444455555555555554443                    


Q ss_pred             ccchhhhhhccccccCeEECCCCcccCcC-CcCcCCccccCeEECCCCccc
Q 045493          604 FSQEISIQIGKLVQLSKLDLSHNSLGGNI-PSEICNLESLEYMNLLQNKLS  653 (1048)
Q Consensus       604 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~  653 (1048)
                          .  .++.+++|++|++++|+|+... ...+..+++|++|++++|+++
T Consensus        59 ----~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~  103 (124)
T d1dcea3          59 ----D--GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC  103 (124)
T ss_dssp             ----G--GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred             ----C--ccccccccCeEECCCCccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence                1  2344444555555555554321 133445555555555555554


No 94 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.49  E-value=2.4e-14  Score=130.75  Aligned_cols=103  Identities=27%  Similarity=0.386  Sum_probs=86.2

Q ss_pred             cEEEecCcccCcccCccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccC
Q 045493          499 ATLNMGGNEISGTIPSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSAN  578 (1048)
Q Consensus       499 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N  578 (1048)
                      +.|+|++|+|+ .++ .+..+++|++|++++|+|+ .+|..|..+++|++|++++|+|++ +| .++.+++|++|++++|
T Consensus         1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N   75 (124)
T d1dcea3           1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN   75 (124)
T ss_dssp             SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred             CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence            57999999998 444 4899999999999999998 567789999999999999999994 44 5889999999999999


Q ss_pred             ccccccc-ccccccccccccccccccccc
Q 045493          579 RLSKLIP-KNLGELRKLHHLNLSNNQFSQ  606 (1048)
Q Consensus       579 ~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~  606 (1048)
                      +|+.+.. ..+..+++|+.|++++|++++
T Consensus        76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~  104 (124)
T d1dcea3          76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQ  104 (124)
T ss_dssp             CCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred             ccCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence            9987643 556777777777777777754


No 95 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48  E-value=7.9e-15  Score=156.24  Aligned_cols=210  Identities=18%  Similarity=0.224  Sum_probs=104.1

Q ss_pred             ccceeEecCCccccC-cccccCCCCCCCeeeCcCCcccCcccccccCCCCccEEEecCc-ccCcccC-ccccccCCCcEE
Q 045493          449 SLYSLRLERNQLTGN-ISEVFGIYPDLELLDLSNNNFFGEISSNWIKCPQLATLNMGGN-EISGTIP-SEIGNMTQLHKL  525 (1048)
Q Consensus       449 ~L~~L~L~~n~l~~~-~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~L~~N-~i~~~~~-~~~~~l~~L~~L  525 (1048)
                      +|++|++++|.++.. ....+..+++|++|+|++|.+++.....+..+++|++|+++++ .+++... ..+..+++|++|
T Consensus        47 ~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L  126 (284)
T d2astb2          47 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDEL  126 (284)
T ss_dssp             CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEE
T ss_pred             CCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcccc
Confidence            444444444444322 1223444455555555555544444444445555555555552 3432211 112345556666


Q ss_pred             EcccC-cccCC-cCccccC-CCccCEEeecCcc--ccCC-CccccccccccceeecccC-cccccccccccccccccccc
Q 045493          526 DFSSN-RLVGQ-IPKQLGK-LTSLTSLTLNGNQ--LSGD-IPLELGLLAELGYLDLSAN-RLSKLIPKNLGELRKLHHLN  598 (1048)
Q Consensus       526 ~Ls~N-~l~~~-~~~~~~~-l~~L~~L~L~~N~--l~~~-~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~l~~l~~L~~L~  598 (1048)
                      +++++ .+++. ....+.. .++|+.|+++++.  ++.. +...+..+++|++|++++| .+++.....+..+++|++|+
T Consensus       127 ~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~  206 (284)
T d2astb2         127 NLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLS  206 (284)
T ss_dssp             ECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEE
T ss_pred             ccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEE
Confidence            66553 23211 1111222 3456666666542  3311 2222345566777777664 35555556666677777777


Q ss_pred             cccc-cccchhhhhhccccccCeEECCCCcccCcCCcCcCCccccCeEECCCCcccCCcccccc
Q 045493          599 LSNN-QFSQEISIQIGKLVQLSKLDLSHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPSCFR  661 (1048)
Q Consensus       599 Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~  661 (1048)
                      |++| .|++.....++.+++|+.|+++++ +++.....+.  ..+..|.+..++++...+..++
T Consensus       207 L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~--~~lp~L~i~~~~ls~~~~~~~~  267 (284)
T d2astb2         207 LSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLK--EALPHLQINCSHFTTIARPTIG  267 (284)
T ss_dssp             CTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHH--HHSTTSEESCCCSCCTTCSSCS
T ss_pred             CCCCCCCChHHHHHHhcCCCCCEEeeeCC-CCHHHHHHHH--HhCccccccCccCCCCCCCccC
Confidence            7773 566666666677777777777776 3322111111  2334444567777765555443


No 96 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.39  E-value=1e-14  Score=145.58  Aligned_cols=112  Identities=23%  Similarity=0.263  Sum_probs=62.8

Q ss_pred             CccccccCCCcEEEcccCcccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccc
Q 045493          513 PSEIGNMTQLHKLDFSSNRLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELR  592 (1048)
Q Consensus       513 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~  592 (1048)
                      +..+..+++|++|+|++|+|+.. + .+..+++|++|+|++|+|+ .+|..+..+++|++|++++|+|+.+  ..+..++
T Consensus        41 ~~sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~  115 (198)
T d1m9la_          41 DATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKLV  115 (198)
T ss_dssp             HHHHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHHH
T ss_pred             hhHHhcccccceeECcccCCCCc-c-cccCCccccChhhcccccc-ccccccccccccccccccccccccc--ccccccc
Confidence            34455566666666666666532 2 3556666666666666665 3344444445566666666666553  2355556


Q ss_pred             cccccccccccccchhh-hhhccccccCeEECCCCccc
Q 045493          593 KLHHLNLSNNQFSQEIS-IQIGKLVQLSKLDLSHNSLG  629 (1048)
Q Consensus       593 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~  629 (1048)
                      +|+.|++++|+|++... ..+..+++|+.|+|++|.+.
T Consensus       116 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~  153 (198)
T d1m9la_         116 NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY  153 (198)
T ss_dssp             HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred             cccccccccchhccccccccccCCCccceeecCCCccc
Confidence            66666666666655432 34555555555555555554


No 97 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.39  E-value=1e-14  Score=145.58  Aligned_cols=144  Identities=24%  Similarity=0.300  Sum_probs=113.2

Q ss_pred             CCcEEEcccC--cccCCcCccccCCCccCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccc
Q 045493          521 QLHKLDFSSN--RLVGQIPKQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLN  598 (1048)
Q Consensus       521 ~L~~L~Ls~N--~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~  598 (1048)
                      .++.++++++  .+. ..+..+..+++|++|+|++|+|+. ++ .+..+++|++|+|++|+|+.+ +..+..+++|++|+
T Consensus        24 ~~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~~i-~~~~~~~~~L~~L~   99 (198)
T d1m9la_          24 EAEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKI-ENLDAVADTLEELW   99 (198)
T ss_dssp             TCSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEECSC-SSHHHHHHHCCEEE
T ss_pred             ccceeeeecccCchh-hhhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccccc-cccccccccccccc
Confidence            3455566554  233 445678889999999999999994 44 588999999999999999876 45556677899999


Q ss_pred             cccccccchhhhhhccccccCeEECCCCcccCcCC-cCcCCccccCeEECCCCcccCCcccc----------ccccCCcc
Q 045493          599 LSNNQFSQEISIQIGKLVQLSKLDLSHNSLGGNIP-SEICNLESLEYMNLLQNKLSGPIPSC----------FRRMHGLS  667 (1048)
Q Consensus       599 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~----------~~~l~~L~  667 (1048)
                      +++|+|+.+.  .+..+++|+.|++++|+|+.... ..+..+++|++|+|++|++....+..          +..+|+|+
T Consensus       100 l~~N~i~~l~--~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~  177 (198)
T d1m9la_         100 ISYNQIASLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLK  177 (198)
T ss_dssp             CSEEECCCHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCC
T ss_pred             cccccccccc--cccccccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcC
Confidence            9999998753  47788999999999999985322 46788999999999999997554432          56788999


Q ss_pred             EEE
Q 045493          668 SID  670 (1048)
Q Consensus       668 ~l~  670 (1048)
                      .||
T Consensus       178 ~LD  180 (198)
T d1m9la_         178 KLD  180 (198)
T ss_dssp             EES
T ss_pred             EeC
Confidence            886


No 98 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27  E-value=3.3e-12  Score=121.58  Aligned_cols=107  Identities=21%  Similarity=0.141  Sum_probs=64.1

Q ss_pred             ccCEEeecCccccCCCccccccccccceeecccC-cccccccccccccccccccccccccccchhhhhhccccccCeEEC
Q 045493          545 SLTSLTLNGNQLSGDIPLELGLLAELGYLDLSAN-RLSKLIPKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDL  623 (1048)
Q Consensus       545 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L  623 (1048)
                      ..+.++++++.++ ..|..+..+++|++|++++| .|+.+.+.+|.++++|+.|+|++|+|+.+.+..|..+++|++|||
T Consensus         9 ~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L   87 (156)
T d2ifga3           9 GSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL   87 (156)
T ss_dssp             SSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred             CCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceec
Confidence            3445666666665 44556666666666666544 366666666666666666666666666666666666666666666


Q ss_pred             CCCcccCcCCcCcCCccccCeEECCCCccc
Q 045493          624 SHNSLGGNIPSEICNLESLEYMNLLQNKLS  653 (1048)
Q Consensus       624 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~  653 (1048)
                      ++|+|+...+..|. ..+|+.|+|++|++.
T Consensus        88 s~N~l~~l~~~~~~-~~~l~~L~L~~Np~~  116 (156)
T d2ifga3          88 SFNALESLSWKTVQ-GLSLQELVLSGNPLH  116 (156)
T ss_dssp             CSSCCSCCCSTTTC-SCCCCEEECCSSCCC
T ss_pred             cCCCCcccChhhhc-cccccccccCCCccc
Confidence            66666633333333 234666666666654


No 99 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26  E-value=4.1e-12  Score=120.96  Aligned_cols=46  Identities=30%  Similarity=0.319  Sum_probs=18.4

Q ss_pred             ccccCCCccCEEeecCccccCCCccccccccccceeecccCccccc
Q 045493          538 KQLGKLTSLTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKL  583 (1048)
Q Consensus       538 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~  583 (1048)
                      .+|.++++|+.|+|++|+|+...+.+|..+++|++|+|++|+|+.+
T Consensus        50 ~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l   95 (156)
T d2ifga3          50 RDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESL   95 (156)
T ss_dssp             GGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCC
T ss_pred             hhhccccccCcceeeccccCCcccccccccccccceeccCCCCccc
Confidence            3344444444444444444333333344444444444444444433


No 100
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.66  E-value=1.5e-09  Score=103.58  Aligned_cols=67  Identities=34%  Similarity=0.310  Sum_probs=32.5

Q ss_pred             ccccccccceeecccCcccccc--cccccccccccccccccccccchhhhhhccccccCeEECCCCccc
Q 045493          563 ELGLLAELGYLDLSANRLSKLI--PKNLGELRKLHHLNLSNNQFSQEISIQIGKLVQLSKLDLSHNSLG  629 (1048)
Q Consensus       563 ~~~~l~~L~~L~Ls~N~l~~~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~  629 (1048)
                      .+..+++|++|+|++|+|+.+.  +..+..+++|+.|+|++|+|+++....+....+|++|++++|.+.
T Consensus        60 ~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~  128 (162)
T d1koha1          60 IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS  128 (162)
T ss_dssp             HHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred             HHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcC
Confidence            3344555555555555555442  233444555555555555555444433333334455555555444


No 101
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.64  E-value=2.2e-09  Score=102.40  Aligned_cols=124  Identities=25%  Similarity=0.161  Sum_probs=82.4

Q ss_pred             cCEEeecCccccCCCccccccccccceeecccCcccccccccccccccccccccccccccchh--hhhhccccccCeEEC
Q 045493          546 LTSLTLNGNQLSGDIPLELGLLAELGYLDLSANRLSKLIPKNLGELRKLHHLNLSNNQFSQEI--SIQIGKLVQLSKLDL  623 (1048)
Q Consensus       546 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L  623 (1048)
                      .+.|+++++...    ..+..+..+..++.++|.+.. .+..+..+++|++|+|++|+|+++.  ...+..+++|+.|||
T Consensus        24 ~~~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~~~-l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~L   98 (162)
T d1koha1          24 QQALDLKGLRSD----PDLVAQNIDVVLNRRSSMAAT-LRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNL   98 (162)
T ss_dssp             SCCBCCCCCSSC----TTTTTTTCCCCTTSHHHHHHH-HHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCC
T ss_pred             hCeeecccCCCC----chhhhccchhhcchhhhHhhh-hHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCccccccc
Confidence            444555544432    123334444445555554433 3455567899999999999998764  345678899999999


Q ss_pred             CCCcccCcCCcCcCCccccCeEECCCCcccCCccc-------cccccCCccEEEecccee
Q 045493          624 SHNSLGGNIPSEICNLESLEYMNLLQNKLSGPIPS-------CFRRMHGLSSIDVSYNEL  676 (1048)
Q Consensus       624 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------~~~~l~~L~~l~ls~N~l  676 (1048)
                      ++|+|+...+-.+.....|+.|++++|+++.....       .+..+|+|+.||  ++++
T Consensus        99 s~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD--g~~v  156 (162)
T d1koha1          99 SGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD--GHEL  156 (162)
T ss_dssp             TTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET--TEEC
T ss_pred             ccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC--cCCC
Confidence            99999854443344456789999999999865543       255788888875  5554


No 102
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.95  E-value=1.8e-06  Score=82.17  Aligned_cols=61  Identities=13%  Similarity=0.099  Sum_probs=30.6

Q ss_pred             ccccCeEECCCCcccCcC----CcCcCCccccCeEECCCCcccCC-------ccccccccCCccEEEeccce
Q 045493          615 LVQLSKLDLSHNSLGGNI----PSEICNLESLEYMNLLQNKLSGP-------IPSCFRRMHGLSSIDVSYNE  675 (1048)
Q Consensus       615 l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~-------~~~~~~~l~~L~~l~ls~N~  675 (1048)
                      .+.|++|+|++|.|++..    ...+...++|++|++++|.+...       +...+...+.|+.|+++++.
T Consensus        71 n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~  142 (167)
T d1pgva_          71 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS  142 (167)
T ss_dssp             CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred             cccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence            344555555555554322    12233445566666666654432       22334445667777766654


No 103
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.92  E-value=2.4e-06  Score=81.22  Aligned_cols=11  Identities=27%  Similarity=0.154  Sum_probs=5.0

Q ss_pred             cccCeEECCCC
Q 045493          640 ESLEYMNLLQN  650 (1048)
Q Consensus       640 ~~L~~L~L~~N  650 (1048)
                      ++|+.|+++.+
T Consensus       131 ~sL~~l~l~~~  141 (167)
T d1pgva_         131 ESLLRVGISFA  141 (167)
T ss_dssp             SSCCEEECCCC
T ss_pred             CCccEeeCcCC
Confidence            44444444443


No 104
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=97.90  E-value=2.9e-05  Score=79.83  Aligned_cols=131  Identities=14%  Similarity=0.070  Sum_probs=86.1

Q ss_pred             cccccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcc-cCceeeEeeEeeeCCeEEEEEEccCCCCHHHHHh
Q 045493          787 GGCGTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR-HRNIVKFYGFCSHTQHLFLVYEYLERGSLATILS  865 (1048)
Q Consensus       787 G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  865 (1048)
                      |+.+.||+... +++.+++|+........ ......+...+..+. +--+.++++++.+++..++||++++|.++.+...
T Consensus        25 ~s~~~v~rv~~-~~~~~vlk~~~~~~~~~-~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~  102 (263)
T d1j7la_          25 MSPAKVYKLVG-ENENLYLKMTDSRYKGT-TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE  102 (263)
T ss_dssp             CSSSEEEEEEC-SSCEEEEEEECGGGTTS-TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTT
T ss_pred             CCCCcEEEEEe-CCCeEEEEEcCCCcccc-hhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccccc
Confidence            33467998864 46778888775543322 222334444444332 3235677788888889999999999988866542


Q ss_pred             ccccccccCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------------
Q 045493          866 NEATAAELDWSKRVNVIKGVANALSYMHHDC-------------------------------------------------  896 (1048)
Q Consensus       866 ~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------------------  896 (1048)
                      ..        .....++.++++.++.||+..                                                 
T Consensus       103 ~~--------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  174 (263)
T d1j7la_         103 DE--------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFL  174 (263)
T ss_dssp             TC--------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHH
T ss_pred             cc--------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHH
Confidence            11        123345666677777777420                                                 


Q ss_pred             -------CCCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493          897 -------FPPILHRDISSKKVLLDLEYKAHVSDFGTAK  927 (1048)
Q Consensus       897 -------~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~  927 (1048)
                             .+.++|+|+.|.||++++++.+-|+||+.+.
T Consensus       175 ~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         175 KTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             HHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                   0237899999999999977666799999775


No 105
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=97.66  E-value=9e-05  Score=75.56  Aligned_cols=130  Identities=12%  Similarity=0.079  Sum_probs=80.3

Q ss_pred             eeccccc-ccEEEEEEcCCCceeeEEeccCCCCcccchhhHHHHHHhhcc--cCceeeEeeEeeeCCeEEEEEEccCCCC
Q 045493          783 LHGTGGC-GTVYKAELTSGDTRAVKKLHSLPTGEIGINQKGFVSEITEIR--HRNIVKFYGFCSHTQHLFLVYEYLERGS  859 (1048)
Q Consensus       783 ~lG~G~~-g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~g~  859 (1048)
                      .+..|.. +.||+....++..+++|........    ....+...++.+.  .-.+.+++++..+.+..++|||+++|-+
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~----~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~   92 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALN----ELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD   92 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCTTS----CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccCHh----HHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccc
Confidence            3445553 5789998887777888876443222    2333444443332  2235667888888888999999998865


Q ss_pred             HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHh---------------------------------------------
Q 045493          860 LATILSNEATAAELDWSKRVNVIKGVANALSYMHH---------------------------------------------  894 (1048)
Q Consensus       860 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~---------------------------------------------  894 (1048)
                      +.+..        ..   ....+.++++.++-||+                                             
T Consensus        93 ~~~~~--------~~---~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (255)
T d1nd4a_          93 LLSSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL  161 (255)
T ss_dssp             TTTSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred             ccccc--------cc---HHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHH
Confidence            43210        11   11122333344444442                                             


Q ss_pred             ------CC----CCCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493          895 ------DC----FPPILHRDISSKKVLLDLEYKAHVSDFGTAK  927 (1048)
Q Consensus       895 ------~~----~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~  927 (1048)
                            ..    .+.++|+|+.|.||+++.+..+-|+||+.+.
T Consensus       162 ~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         162 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence                  11    1247999999999999987667899999775


No 106
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.47  E-value=2e-05  Score=74.63  Aligned_cols=86  Identities=15%  Similarity=0.180  Sum_probs=35.1

Q ss_pred             CCCccCEEeecCccccCC----CccccccccccceeecccCcccccc----cccccccccccc--cccccccccchhhhh
Q 045493          542 KLTSLTSLTLNGNQLSGD----IPLELGLLAELGYLDLSANRLSKLI----PKNLGELRKLHH--LNLSNNQFSQEISIQ  611 (1048)
Q Consensus       542 ~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~l~~l~~L~~--L~Ls~N~l~~~~~~~  611 (1048)
                      ..++|++|+|++|.++..    +...+...+.++.+++++|.++...    .+.+...++|+.  |++++|.+++.+...
T Consensus        44 ~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~  123 (166)
T d1io0a_          44 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEME  123 (166)
T ss_dssp             TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH
T ss_pred             cCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHH
Confidence            344444445544444321    1122233344444444444443211    123334444543  333445554433222


Q ss_pred             h----ccccccCeEECCCCc
Q 045493          612 I----GKLVQLSKLDLSHNS  627 (1048)
Q Consensus       612 ~----~~l~~L~~L~Ls~N~  627 (1048)
                      +    ...++|+.|+++.+.
T Consensus       124 La~~L~~n~~L~~L~l~~~~  143 (166)
T d1io0a_         124 IANMLEKNTTLLKFGYHFTQ  143 (166)
T ss_dssp             HHHHHHHCSSCCEEECCCSS
T ss_pred             HHHHHHhCCCcCEEeCcCCC
Confidence            2    244455555554443


No 107
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.43  E-value=1.7e-05  Score=75.07  Aligned_cols=87  Identities=10%  Similarity=0.161  Sum_probs=41.8

Q ss_pred             ccccccccccccccccchhhhh----hccccccCeEECCCCcccCcC----CcCcCCccccCeEEC--CCCcccCC----
Q 045493          590 ELRKLHHLNLSNNQFSQEISIQ----IGKLVQLSKLDLSHNSLGGNI----PSEICNLESLEYMNL--LQNKLSGP----  655 (1048)
Q Consensus       590 ~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L--~~N~l~~~----  655 (1048)
                      ..+.|++|+|++|.++......    +...++++.|++++|.++...    ...+...++|+.++|  ++|++...    
T Consensus        44 ~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~  123 (166)
T d1io0a_          44 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEME  123 (166)
T ss_dssp             TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH
T ss_pred             cCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHH
Confidence            3344444455544444433222    223455556666655554322    233344555655433  34555432    


Q ss_pred             ccccccccCCccEEEecccee
Q 045493          656 IPSCFRRMHGLSSIDVSYNEL  676 (1048)
Q Consensus       656 ~~~~~~~l~~L~~l~ls~N~l  676 (1048)
                      +...+.+.+.|+.|++++|..
T Consensus       124 La~~L~~n~~L~~L~l~~~~~  144 (166)
T d1io0a_         124 IANMLEKNTTLLKFGYHFTQQ  144 (166)
T ss_dssp             HHHHHHHCSSCCEEECCCSSH
T ss_pred             HHHHHHhCCCcCEEeCcCCCC
Confidence            233344566677777666543


No 108
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=96.87  E-value=0.0016  Score=70.38  Aligned_cols=29  Identities=17%  Similarity=0.263  Sum_probs=25.4

Q ss_pred             CeEeeCCCCCCeEECCCCceEEeccccccc
Q 045493          899 PILHRDISSKKVLLDLEYKAHVSDFGTAKF  928 (1048)
Q Consensus       899 ~iiH~Dik~~NIll~~~~~~kl~DfG~a~~  928 (1048)
                      .++|||+.|.|||+++++ ++|+||..|..
T Consensus       224 ~LiHGDl~~gNIlv~~~~-~~vID~E~a~~  252 (392)
T d2pula1         224 TLIHGDLHTGSIFASEHE-TKVIDPEFAFY  252 (392)
T ss_dssp             EEECSCCCGGGEEECSSC-EEECCCTTCEE
T ss_pred             ceeccCCcCCceeEcCCc-eEEechhhccc
Confidence            689999999999998764 89999988864


No 109
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=96.01  E-value=0.013  Score=61.21  Aligned_cols=29  Identities=21%  Similarity=0.137  Sum_probs=24.0

Q ss_pred             CCeEeeCCCCCCeEECCCCceEEeccccccc
Q 045493          898 PPILHRDISSKKVLLDLEYKAHVSDFGTAKF  928 (1048)
Q Consensus       898 ~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~  928 (1048)
                      .++||+|+.+.||+++. + ..++||+-++.
T Consensus       192 ~~liHgDlh~~NvL~~~-~-~~~IDFdd~~~  220 (325)
T d1zyla1         192 VLRLHGDCHAGNILWRD-G-PMFVDLDDARN  220 (325)
T ss_dssp             CEECCSSCSGGGEEESS-S-EEECCCTTCCE
T ss_pred             ceeecCCCCcccEEEeC-C-ceEEechhccc
Confidence            47899999999999974 3 45899998864


No 110
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.17  E-value=0.041  Score=56.89  Aligned_cols=30  Identities=20%  Similarity=0.201  Sum_probs=27.1

Q ss_pred             CCeEeeCCCCCCeEECCCCceEEecccccc
Q 045493          898 PPILHRDISSKKVLLDLEYKAHVSDFGTAK  927 (1048)
Q Consensus       898 ~~iiH~Dik~~NIll~~~~~~kl~DfG~a~  927 (1048)
                      .++||+|+.+.||+++.+...-|.||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccccceeEecccccc
Confidence            389999999999999988777899999886


No 111
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=94.54  E-value=0.063  Score=57.47  Aligned_cols=73  Identities=15%  Similarity=0.098  Sum_probs=42.4

Q ss_pred             eeeecccccccEEEEEEcCCC-------ceeeEEeccCCCCcccchhhHHHHHHhhcc-cCceeeEeeEeeeCCeEEEEE
Q 045493          781 MVLHGTGGCGTVYKAELTSGD-------TRAVKKLHSLPTGEIGINQKGFVSEITEIR-HRNIVKFYGFCSHTQHLFLVY  852 (1048)
Q Consensus       781 ~~~lG~G~~g~Vy~~~~~~~~-------~vavk~~~~~~~~~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~lv~  852 (1048)
                      .+.++.|-.-.+|++...++.       ..++.++....  ........+.+.++.+. +.-..++++++.+    ++|+
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~--~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~  120 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  120 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc--chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence            345788888899999876432       22344443322  22234445555555553 3334467777643    6799


Q ss_pred             EccCCCC
Q 045493          853 EYLERGS  859 (1048)
Q Consensus       853 e~~~~g~  859 (1048)
                      ||++|..
T Consensus       121 efi~g~~  127 (395)
T d1nw1a_         121 EYIPSRP  127 (395)
T ss_dssp             CCCCEEE
T ss_pred             EEecccc
Confidence            9998753


Done!