Your job contains 1 sequence.
>045494
MRGGFEVVHGALDMMQHYEQWDYPSIGFPNPCPNSFTKPPPPPLAVIDNRSVNLERNELS
EWVEHITKQLIDDMPDSSTNNADHGLQPDHHHTTIGPCEDNSIIPSVLGDLRPRKMMRIS
YDGEESFSWSNEQQLGVNQSNINCESHNKLDEQGLRLITLLLECAVAISVDNLGEAHRML
LELTQMASPYGPSCAERVVAYFAKAMASRVLNSWLGICSPLTNHKSVHCAFQVFNNVSPF
IKFAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTS
MEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLRRGETLAVHWLQHSLYDAT
GPDWKTLRLLEELSPRVVTLVEQEISHGGDDPNRHRVEHCLLYREINNILAIGGPARSGE
DKFKHWRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSL
FTASSWTSHASR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045494
(492 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 772 1.3e-107 3
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 626 2.0e-79 2
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 380 5.8e-51 3
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 387 2.5e-49 3
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 431 4.7e-49 2
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 387 2.3e-48 2
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 386 9.8e-48 2
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 363 2.5e-43 2
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 362 3.1e-42 2
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 300 7.6e-39 3
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 307 9.6e-37 2
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 291 2.4e-36 3
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 381 3.1e-35 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 317 9.2e-33 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 297 2.0e-31 3
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 296 2.0e-30 2
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 294 2.8e-29 2
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 272 3.0e-29 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 248 1.7e-24 2
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 261 7.1e-24 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 250 3.0e-23 2
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 273 5.0e-21 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 229 7.8e-21 2
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 236 1.5e-20 2
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 212 1.1e-17 3
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 200 6.9e-17 3
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 193 4.3e-15 2
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 192 4.3e-13 2
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 175 8.5e-13 2
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 167 1.2e-12 2
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 176 2.7e-12 2
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 105 7.1e-06 2
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 772 (276.8 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 149/248 (60%), Positives = 195/248 (78%)
Query: 149 KLDEQGLRLITLLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMAS 208
K DE+GL L+TLLL+CA A+S DNL EA+++LLE++Q+++PYG S A+RV AYF++AM++
Sbjct: 282 KQDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTS-AQRVAAYFSEAMSA 340
Query: 209 RVLNSWLGICS-------PLTNHKSVHCAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDR 261
R+LNS LGI + P T+ + AFQVFN +SP +KF+HFT+NQAI EAF + D
Sbjct: 341 RLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDS 400
Query: 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS 321
VHIIDLDIMQGLQWP LFHILA+R GPPH+R+TG+GTSME L TGK+L +FA +LGL
Sbjct: 401 VHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLP 460
Query: 322 FEFHPIAKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLV 381
FEF P+A+K G++D L +R+ E +AVHWLQHSLYD TG D TL LL+ L+P+VVT+V
Sbjct: 461 FEFCPLAEKVGNLDTERLNVRKREAVAVHWLQHSLYDVTGSDAHTLWLLQRLAPKVVTVV 520
Query: 382 EQEISHGG 389
EQ++SH G
Sbjct: 521 EQDLSHAG 528
Score = 280 (103.6 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 53/102 (51%), Positives = 73/102 (71%)
Query: 386 SHGGDDPNRHRVEHCLLYREINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMSGNS 445
S+G + RH VE LL +EI N+LA+GGP+RSGE KF+ WR ++ +C GF + ++GN+
Sbjct: 551 SYGEESEERHVVEQQLLSKEIRNVLAVGGPSRSGEVKFESWREKMQQC-GFKGISLAGNA 609
Query: 446 MAQAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASSWT 487
QA L+L MFP + GY+L+ +GTL LGWK SL TAS+WT
Sbjct: 610 ATQATLLLGMFP-SDGYTLVDDNGTLKLGWKDLSLLTASAWT 650
Score = 46 (21.3 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 39 PPPPPLAVIDNR 50
PPPPPL ++ R
Sbjct: 36 PPPPPLVMVRKR 47
Score = 42 (19.8 bits), Expect = 3.5e-107, Sum P(3) = 3.5e-107
Identities = 6/7 (85%), Positives = 7/7 (100%)
Query: 38 KPPPPPL 44
KPPPPP+
Sbjct: 231 KPPPPPI 237
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 626 (225.4 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 133/277 (48%), Positives = 185/277 (66%)
Query: 155 LRLITLLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVLNSW 214
++L++LLL+CA ++ D+L EA +L E++++ SP+G S ERVVAYFA+A+ +RV++S+
Sbjct: 38 IKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSS-PERVVAYFAQALQTRVISSY 96
Query: 215 L-GICSPLTNH-------KSVHCAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDRVHIID 266
L G CSPL+ + + A Q +N+VSP IKF+HFT+NQAI +A D VHIID
Sbjct: 97 LSGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIID 156
Query: 267 LDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHP 326
LD+MQGLQWPALFHILA+R +R+TG G+S ++L TG++L +FA L L FEFHP
Sbjct: 157 LDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEFHP 216
Query: 327 IAKKFGD-IDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVEQEI 385
I G+ ID S L R+GE + VHW+QH LYD TG + +TL +L L P ++T+VEQE+
Sbjct: 217 IEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNLITVVEQEL 276
Query: 386 SH--GGDDPNRHRVEHCLLYREINNILAIGGPARSGE 420
S+ GG R VE Y + + L G SGE
Sbjct: 277 SYDDGGSFLGRF-VEALHYYSALFDALGDGLGEESGE 312
Score = 191 (72.3 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 46/101 (45%), Positives = 58/101 (57%)
Query: 388 GGDDPNRHRVEHCLLYREINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMSGNSMA 447
G + R VE +L EI NI+A GG G K W+ EL+R GF V + GN
Sbjct: 307 GEESGERFTVEQIVLGTEIRNIVAHGG----GRRKRMKWKEELSRV-GFRPVSLRGNPAT 361
Query: 448 QAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASSWTS 488
QA L+L M P +GY+L+ +GTL LGWK SL TAS+W S
Sbjct: 362 QAGLLLGMLP-WNGYTLVEENGTLRLGWKDLSLLTASAWKS 401
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 380 (138.8 bits), Expect = 5.8e-51, Sum P(3) = 5.8e-51
Identities = 95/263 (36%), Positives = 143/263 (54%)
Query: 132 EQQLGVNQSNINCESHNKLDEQGLRLITLLLECAVAISVDNLGEAHRMLLELTQMASPYG 191
E +L +S + +S E G+RL+ LL CA A+ +NL A ++ + +AS
Sbjct: 131 ESELSSTRSVVVLDSQ----ETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQA 186
Query: 192 PSCAERVVAYFAKAMASRVLNSWLGICSPLTNHKSVHCAFQV-FNNVSPFIKFAHFTSNQ 250
+V YFA+ +A R+ + L++ Q+ F P++KFAHFT+NQ
Sbjct: 187 -GAMRKVATYFAEGLARRIYRIYPRDDVALSSFSDT---LQIHFYESCPYLKFAHFTANQ 242
Query: 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQ 310
AILE F ++VH+IDL + GLQWPAL LA R GPP R+TG+G S+ + E G +
Sbjct: 243 AILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWK 302
Query: 311 LFNFAKRLGLSFEFHPIA-KKFGDIDASMLQLRRG-ETLAVHWL--QHSLYDATGPDWKT 366
L A +G++FEF IA D+ ML +R G E++AV+ + H L G K
Sbjct: 303 LGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKF 362
Query: 367 LRLLEELSPRVVTLVEQEISHGG 389
L ++ + P ++T+VEQE +H G
Sbjct: 363 LSTIKSIRPDIMTVVEQEANHNG 385
Score = 132 (51.5 bits), Expect = 5.8e-51, Sum P(3) = 5.8e-51
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 392 PNRHRV-EHCLLYREINNILAIGGPAR-SGEDKFKHWRSELARCNGFAQVPMSGNSMAQA 449
P++ RV L R+I N++A G R + WR+ GF V + N+ QA
Sbjct: 410 PSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFG-LGGFKPVSIGSNAYKQA 468
Query: 450 QLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASSW 486
++L ++ A GY++ +G L+LGW+ L S+W
Sbjct: 469 SMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAW 505
Score = 46 (21.3 bits), Expect = 5.8e-51, Sum P(3) = 5.8e-51
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 47 IDNRSVNLERNELSEWVEHITKQL----IDDMPDSSTN-NADHG--LQPDHHHTT 94
+ + +V+ ++LS WVE + L I + PDS + A G + P H T
Sbjct: 68 LSDETVHYNPSDLSGWVESMLSDLDPTRIQEKPDSEYDLRAIPGSAVYPRDEHVT 122
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 387 (141.3 bits), Expect = 2.5e-49, Sum P(3) = 2.5e-49
Identities = 97/251 (38%), Positives = 139/251 (55%)
Query: 152 EQGLRLITLLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVL 211
E G+RL+ L+ CA AI +NL A ++ ++ +A +V YFA+A+A R+
Sbjct: 216 ENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQA-GAMRKVATYFAEALARRIY 274
Query: 212 NSWLGICSPLTNHKSVHC---AFQV-FNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDL 267
SP N HC Q+ F P++KFAHFT+NQAILEAF + RVH+ID
Sbjct: 275 R-----LSPPQNQID-HCLSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDF 328
Query: 268 DIMQGLQWPALFHILATRNEGPPHLRMTGMGT----SMEVLLETGKQLFNFAKRLGLSFE 323
+ QGLQWPAL LA R GPP R+TG+G + + L E G +L A+ + + FE
Sbjct: 329 SMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFE 388
Query: 324 FHP-IAKKFGDIDASMLQLRRGETLAVH----WLQHSLYDATGPDWKTLRLLEELSPRVV 378
+ +A D+DASML+LR +T AV + H L G K L +++++ P +
Sbjct: 389 YRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVKQIKPVIF 448
Query: 379 TLVEQEISHGG 389
T+VEQE +H G
Sbjct: 449 TVVEQESNHNG 459
Score = 125 (49.1 bits), Expect = 2.5e-49, Sum P(3) = 2.5e-49
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 402 LYREINNILAIGGPAR-SGEDKFKHWRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAH 460
L ++I N++A GP R + W + +G A + N+ QA ++L++F
Sbjct: 496 LGKQICNLVACEGPDRVERHETLSQWGNRFGS-SGLAPAHLGSNAFKQASMLLSVFNSGQ 554
Query: 461 GYSLIPGDGTLMLGWKGTSLFTASSW 486
GY + +G LMLGW L T S+W
Sbjct: 555 GYRVEESNGCLMLGWHTRPLITTSAW 580
Score = 38 (18.4 bits), Expect = 2.5e-49, Sum P(3) = 2.5e-49
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 51 SVNLERNELSEWVEHITKQLIDDMPDSSTNNAD 83
+V+ +EL W++++ +L +S+N D
Sbjct: 88 TVHYNPSELYSWLDNMLSELNPPPLPASSNGLD 120
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 431 (156.8 bits), Expect = 4.7e-49, Sum P(2) = 4.7e-49
Identities = 103/275 (37%), Positives = 152/275 (55%)
Query: 141 NINCESHNKLD-EQGLRLITLLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVV 199
NIN ++N+ D ++ L+ LL C AI N+ + + +ASP G + R++
Sbjct: 258 NIN-NNNNRNDLQRDFELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLI 316
Query: 200 AYFAKAMASRVLNSW---LGICSPLTNHKSVHC----AFQVFNNVSPFIKFAHFTSNQAI 252
AY+ +A+A RV W I P ++V A + N V+P KF HFT+N+ +
Sbjct: 317 AYYIEALALRVARMWPHIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEML 376
Query: 253 LEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312
L AF ++RVHIID DI QGLQWP+ F LA+R P H+R+TG+G S L ETG +L
Sbjct: 377 LRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKLELNETGDRLH 436
Query: 313 NFAKRLGLSFEFHPIAKKFGDIDASMLQLRRGETLAVHWLQ--H-SLYDATGPDWKT-LR 368
FA+ + L FEFHP+ + D+ ML ++ GE++AV+ + H +LYD TG + L
Sbjct: 437 GFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLG 496
Query: 369 LLEELSPRVVTLVEQEISHGGDDPNRHRVEHCLLY 403
L+ +P + L EQE H + RV + L Y
Sbjct: 497 LIRSTNPIALVLAEQEAEHNSEQLET-RVCNSLKY 530
Score = 104 (41.7 bits), Expect = 4.7e-49, Sum P(2) = 4.7e-49
Identities = 34/112 (30%), Positives = 54/112 (48%)
Query: 390 DDPNRHRVEHCLLYREINNILAIGGPARSGEDK-FKHWRSELARCNGFAQVPMSGNSMAQ 448
D R +VE L REI NI+A G R F+HWR L + GF + +S + Q
Sbjct: 545 DSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQL-GFRSLGVSEREVLQ 603
Query: 449 AQLILNMFPPAH-GYSLIP-------GDGT----LMLGWKGTSLFTASSWTS 488
++++L M+ + G+ + G+G + L W L+T S+WT+
Sbjct: 604 SKMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAWTT 655
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 387 (141.3 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 106/282 (37%), Positives = 156/282 (55%)
Query: 152 EQGLRLITLLLECAVAISVDNLGEAHRMLLELTQMA-SPYGPSCAERVVAYFAKAMASRV 210
E G+RL+ LL CA A+ +NL A ++ ++ +A S G +V YFA+A+A R+
Sbjct: 164 ENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIG--AMRKVATYFAEALARRI 221
Query: 211 LNSWLGICSPLTNHKSVHCAFQV-FNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDI 269
SP+ +H S+ Q+ F P++KFAHFT+NQAILEAF + RVH+ID +
Sbjct: 222 YRLSPSQ-SPI-DH-SLSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSM 278
Query: 270 MQGLQWPALFHILATRNEGPPHLRMTGMGT----SMEVLLETGKQLFNFAKRLGLSFEFH 325
QGLQWPAL LA R GPP R+TG+G + + L E G +L + A+ + + FE+
Sbjct: 279 SQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYR 338
Query: 326 P-IAKKFGDIDASMLQLRRGE--TLAVHWL--QHSLYDATGPDWKTLRLLEELSPRVVTL 380
+A D+DASML+LR E ++AV+ + H L G K L ++ ++ P + T+
Sbjct: 339 GFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVNQIKPEIFTV 398
Query: 381 VEQEISHGGDDPNRHRVEHCLLYREINNILAIGGPARSGEDK 422
VEQE +H E Y + + L G P SG+DK
Sbjct: 399 VEQESNHNSPIFLDRFTESLHYYSTLFDSLE-GVP--SGQDK 437
Score = 135 (52.6 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 402 LYREINNILAIGGPAR-SGEDKFKHWRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAH 460
L ++I N++A GP R + WR+ GFA + N+ QA ++L +F
Sbjct: 444 LGKQICNVVACDGPDRVERHETLSQWRNRFGSA-GFAAAHIGSNAFKQASMLLALFNGGE 502
Query: 461 GYSLIPGDGTLMLGWKGTSLFTASSW 486
GY + DG LMLGW L S+W
Sbjct: 503 GYRVEESDGCLMLGWHTRPLIATSAW 528
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 386 (140.9 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 117/357 (32%), Positives = 179/357 (50%)
Query: 49 NRSVNLERNELSEWVEHITKQLIDDMPDSSTNNADHGLQPDHHHTTIGPCE-DNSIIPSV 107
N SV+ ++LS WVE + +L N A L D + + E D IP +
Sbjct: 84 NDSVHYNPSDLSNWVESMLSEL--------NNPASSDL--DTTRSCVDRSEYDLRAIPGL 133
Query: 108 LGDLRPRKMMRISYDGEESFSWSNEQQLG--VNQSNINCESHNKLDEQ--GLRLITLLLE 163
+ ++ +D E S S +LG S+ + S +D Q G+RL+ L+
Sbjct: 134 SAFPKEEEV----FDEEAS---SKRIRLGSWCESSDESTRSVVLVDSQETGVRLVHALVA 186
Query: 164 CAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVLNSWLG---ICSP 220
CA AI +NL A ++ + +A + +V YFA+A+A R+ + +C+
Sbjct: 187 CAEAIHQENLNLADALVKRVGTLAGSQAGAMG-KVATYFAQALARRIYRDYTAETDVCAA 245
Query: 221 LTNHKSVHCAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFH 280
+ N F P++KFAHFT+NQAILEA RVH+IDL + QG+QWPAL
Sbjct: 246 V-NPSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQ 304
Query: 281 ILATRNEGPPHLRMTGMGT----SMEVLLETGKQLFNFAKRLGLSFEFHPIA-KKFGDID 335
LA R GPP R+TG+G + + L + G +L FA+ +G+ FEF +A + D++
Sbjct: 305 ALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLE 364
Query: 336 ASMLQLR-RGETLAVHWL--QHSLYDATGPDWKTLRLLEELSPRVVTLVEQEISHGG 389
M + R ETL V+ + H L +G K L ++ + P +VT+VEQE +H G
Sbjct: 365 PEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNTVKAIKPSIVTVVEQEANHNG 421
Score = 130 (50.8 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 392 PNRHRV-EHCLLYREINNILAIGGPAR-SGEDKFKHWRSELARCNGFAQVPMSGNSMAQA 449
P++ RV L R+I N++A G R + WR + + GF + + ++ QA
Sbjct: 449 PSQDRVMSEVYLGRQILNVVAAEGSDRVERHETAAQWRIRM-KSAGFDPIHLGSSAFKQA 507
Query: 450 QLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASSW 486
++L+++ GY + DG LM+GW+ L T S+W
Sbjct: 508 SMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAW 544
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 363 (132.8 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 95/270 (35%), Positives = 148/270 (54%)
Query: 131 NEQQLGVNQSNINCESHNKLDEQGLRLITLLLECAVAISVDNLGEAHRMLLELTQMASPY 190
N L + S +C K +E+GL LI LLL CA ++ +L A+ L +L+ +ASP
Sbjct: 28 NRPTLLASSSPFHCLKDLKPEERGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPD 87
Query: 191 GPSCAERVVAYFAKAMASRVLNSWLGICSPL------TNHKS--VHCAFQVFNNVSPFIK 242
G + +R+ AYF +A+A+R+L SW G+ L TN+ S +H ++F + P +K
Sbjct: 88 GDTM-QRIAAYFTEALANRILKSWPGLYKALNATQTRTNNVSEEIHVR-RLFFEMFPILK 145
Query: 243 FAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSME 302
++ +N+AILEA VH+IDLD + QW AL +R EGPPHLR+TG+ E
Sbjct: 146 VSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRITGVHHQKE 205
Query: 303 VLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLRRGETLAVHW-LQHSLYDATG 361
VL + +L A++L + F+F+P+ + ++ L+++ GE LAV LQ + A+
Sbjct: 206 VLEQMAHRLIEEAEKLDIPFQFNPVVSRLDCLNVEQLRVKTGEALAVSSVLQLHTFLASD 265
Query: 362 PDW--KTLRLLEELSPRVVTLVEQ-EISHG 388
D K L + +P V L +SHG
Sbjct: 266 DDLMRKNCALRFQNNPSGVDLQRVLMMSHG 295
Score = 111 (44.1 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 368 RLLEELSPRVVTL--VEQEISHGGDDPNRHRVEHCLLYREINNILAIGG-PARSGEDKFK 424
RLLE L +E ++ D R +VE L EI NI++ G R +K +
Sbjct: 361 RLLESLYTYAALFDCLETKVPRTSQD--RIKVEKMLFGEEIKNIISCEGFERRERHEKLE 418
Query: 425 HWRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTAS 484
W S+ GF VP+S +M QA+ +L GY + G ++ W+ L++ S
Sbjct: 419 KW-SQRIDLAGFGNVPLSYYAMLQARRLLQGCG-FDGYRIKEESGCAVICWQDRPLYSVS 476
Query: 485 SW 486
+W
Sbjct: 477 AW 478
Score = 61 (26.5 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 373 LSPRVVTLVEQEISHGGDDPNRHRVEHCLLYREINNILAIGGPARSGEDKFK 424
LSP+V+ + EQ+ H G +E Y + + L P R+ +D+ K
Sbjct: 339 LSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVP-RTSQDRIK 389
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 362 (132.5 bits), Expect = 3.1e-42, Sum P(2) = 3.1e-42
Identities = 114/349 (32%), Positives = 179/349 (51%)
Query: 58 ELSEWVEHITK--QLIDDMPDSST--NNADHGLQ-PDHHHT-----TIGPCEDNSIIPSV 107
E EW+E + + D PD T +N D+ + PD T ++ P + N +I +
Sbjct: 112 ESDEWMETLISGGDSVADGPDCDTWHDNPDYVIYGPDPFDTYPSRLSVQPSDLNRVIDTS 171
Query: 108 LGDLRPRKMMRISYDGEESFSWSNEQQLGVNQSNINCESHNKLDEQGLRLITLLLECAVA 167
L P + S S + N + D + L+ + +CA
Sbjct: 172 -SPLPPPTLWPPS--SPLSIPPLTHESPTKEDPETNDSEDDDFDLEP-PLLKAIYDCA-R 226
Query: 168 ISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVLNSWLGICSPLTNHKSV 227
IS + EA + LL++ + S G ERV YF +A+++R+ + S ++ + +
Sbjct: 227 ISDSDPNEASKTLLQIRESVSELGDP-TERVAFYFTEALSNRLSPNSPATSSSSSSTEDL 285
Query: 228 HCAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNE 287
+++ N+ P+ KFAH T+NQAILEA + +++HI+D I+QG+QWPAL LATR
Sbjct: 286 ILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPALLQALATRTS 345
Query: 288 GPP-HLRMTG-----MGTSMEV-LLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340
G P +R++G +G S E L+ TG +L +FAK L L+F+F PI ++ S +
Sbjct: 346 GKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFR 405
Query: 341 LRRGETLAVHW-LQ-HSLYDATGPDWKT-LRLLEELSPRVVTLVEQEIS 386
+ E LAV++ LQ + L D T T LRL + L+PRVVTL E E+S
Sbjct: 406 VDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSLNPRVVTLGEYEVS 454
Score = 110 (43.8 bits), Expect = 3.1e-42, Sum P(2) = 3.1e-42
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 388 GGDDPNRHRVEHCLLYREINNILAIGGPARSG------EDKFKHWRSELARCNGFAQVPM 441
G D R RVE L R I+ ++ GP ++G E+K + WR + GF V +
Sbjct: 483 GRDSEERVRVERELFGRRISGLI---GPEKTGIHRERMEEK-EQWRVLMENA-GFESVKL 537
Query: 442 SGNSMAQAQLILNMFPPAHGYSLIPGD-GTLMLGWKGTSLFTASSW 486
S +++QA+++L + ++ YS++ G + L W L T SSW
Sbjct: 538 SNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSW 583
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 300 (110.7 bits), Expect = 7.6e-39, Sum P(3) = 7.6e-39
Identities = 72/177 (40%), Positives = 102/177 (57%)
Query: 229 CAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDR--VHIIDLDIMQGLQWPALFHILATRN 286
C + N ++PFI+F H T+NQAIL+A D +HI+DLDI QGLQWP L LA R+
Sbjct: 144 CYYLWLNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERS 203
Query: 287 EGP----PHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLR 342
P P LR+TG G + L TG +L FA LGL F+FH + D+ +LQ+R
Sbjct: 204 SNPSSPPPSLRITGCGRDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIR 263
Query: 343 -------RGETLAV---HWLQHSLYDATGPD-WKTLRLLEELSPRVVTLVEQEISHG 388
+GET+AV H+L H +++ G L ++ L+ R+VT+ E+E +HG
Sbjct: 264 LLALSAVQGETIAVNCVHFL-HKIFNDDGDMIGHFLSAIKSLNSRIVTMAEREANHG 319
Score = 128 (50.1 bits), Expect = 7.6e-39, Sum P(3) = 7.6e-39
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 392 PN-RHRV--EHCLLYREINNILAIGGPARSGEDK-FKHWRSELARCNGFAQVPMSGNSMA 447
PN R R+ E +EI +++A R + F+ W + R GF VP+ +++
Sbjct: 347 PNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRF-GFVNVPIGSFALS 405
Query: 448 QAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASSW 486
QA+L+L + P+ GY+L + +L LGW+ LF+ SSW
Sbjct: 406 QAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSW 444
Score = 70 (29.7 bits), Expect = 7.6e-39, Sum P(3) = 7.6e-39
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 160 LLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRV 210
LL A +S N A +L L+ +SP+G S ER+V F KA++ R+
Sbjct: 44 LLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDS-TERLVHLFTKALSVRI 93
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 307 (113.1 bits), Expect = 9.6e-37, Sum P(2) = 9.6e-37
Identities = 83/240 (34%), Positives = 129/240 (53%)
Query: 155 LRLITLLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVLNSW 214
L+L+ L+ CA A+S +NL A + EL M S G +R+ AY + + +R+ S
Sbjct: 50 LKLV--LVACAKAVSENNLLMARWCMGELRGMVSISGEPI-QRLGAYMLEGLVARLAASG 106
Query: 215 LGICSPLTNHKSVHCAF----QVFNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIM 270
I L + + F V + V P+ KF + ++N AI EA +R+HIID I
Sbjct: 107 SSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIG 166
Query: 271 QGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKK 330
QG QW AL A R G P++R+TG+G VL+ K+L AK+ + F F+ +++
Sbjct: 167 QGSQWIALIQAFAARPGGAPNIRITGVGDG-SVLVTVKKRLEKLAKKFDVPFRFNAVSRP 225
Query: 331 FGDIDASMLQLRRGETLAVH--WLQHSLYDAT----GPDWKTLRLLEELSPRVVTLVEQE 384
+++ L +R GE L V+ ++ H L D + + LR+++ LSP+VVTLVEQE
Sbjct: 226 SCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQE 285
Score = 111 (44.1 bits), Expect = 9.6e-37, Sum P(2) = 9.6e-37
Identities = 33/121 (27%), Positives = 55/121 (45%)
Query: 368 RLLEELSPRVVTLVEQEISHGGDDPNRHRVE-HCLLYREINNILAIGGPAR-SGEDKFKH 425
R LE LS ++ + R +E HC+ R++ NI+A G R +
Sbjct: 296 RFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMA-RDVVNIIACEGAERIERHELLGK 354
Query: 426 WRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASS 485
W+S + GF P+S A + +L + ++GY++ DG L LGW L ++ +
Sbjct: 355 WKSRFSMA-GFEPYPLSSIISATIRALLRDY--SNGYAIEERDGALYLGWMDRILVSSCA 411
Query: 486 W 486
W
Sbjct: 412 W 412
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 291 (107.5 bits), Expect = 2.4e-36, Sum P(3) = 2.4e-36
Identities = 70/175 (40%), Positives = 100/175 (57%)
Query: 160 LLLECAVAISVDNLGEAHRML-LELTQMASPYGPSCAERVVAYFAKAMASRV-LNSWLG- 216
LLL CA + +L A R + L ASP G + A+R+ +FA+A+A RV + G
Sbjct: 53 LLLACADLLQRGDLPAARRAAEIVLAAAASPRGDA-ADRLAYHFARALALRVDAKAGHGH 111
Query: 217 -ICSPLTNHKSVHCAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQW 275
+ + A+ FN ++PF++FAH T+NQAILEA RVHI+DLD + G+QW
Sbjct: 112 VVVGGGAARPASSGAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQW 171
Query: 276 PALFHILATRNE---GPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPI 327
P L +A R + GPP +R+TG G + LL TG +L FA+ + L F F P+
Sbjct: 172 PPLLQAIAERADPALGPPEVRVTGAGADRDTLLRTGNRLRAFARSIHLPFHFTPL 226
Score = 118 (46.6 bits), Expect = 2.4e-36, Sum P(3) = 2.4e-36
Identities = 32/98 (32%), Positives = 48/98 (48%)
Query: 394 RHRVEHCLLYREINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMSGNSMAQAQLIL 453
R VE +L REI A+G + W AR GFA P+S +++QA+L+L
Sbjct: 347 RLAVEQEVLGREIE--AAVGPSGGRWWRGIERWGGA-ARAAGFAARPLSAFAVSQARLLL 403
Query: 454 NMFPPAHGYSLIPGDGTLMLGWKGTSLFTASSWTSHAS 491
+ P+ GY + G LGW+ L + S+W +S
Sbjct: 404 RLHYPSEGYLVQEARGACFLGWQTRPLLSVSAWQPSSS 441
Score = 69 (29.3 bits), Expect = 2.4e-36, Sum P(3) = 2.4e-36
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 336 ASMLQLRRGETLAVHWLQHSLYDATGPDWKT--LRLLEELSPRVVTLVEQEISHGG 389
A+ L+ ETLAV+ + L++ G D L+ ++ +SP VVT+ E+E GG
Sbjct: 255 ATGLEFHPDETLAVNCVMF-LHNLAGHDELAAFLKWVKAMSPAVVTIAEREAGGGG 309
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 114/366 (31%), Positives = 192/366 (52%)
Query: 44 LAVIDNRSVNLERNELSEWVEHITKQLIDDMPDSST--NNADHGLQPDHHHTTIGPCEDN 101
LAV+ + + + ++++ +E + L +D+ SS N+ H D D
Sbjct: 37 LAVLGYKVRSSDMADVAQKLEQLEMVLSNDIASSSNAFNDTVHYNPSDLSGWAQSMLSDL 96
Query: 102 SIIPSV----LGDLRPRKMMRISYDGE--ESFSWSNEQ-QLGVNQSNINCESHNK---LD 151
+ P + + DLRP I+ D E S S SN++ +LG ++ ES ++
Sbjct: 97 NYYPDLDPNRICDLRP-----ITDDDECCSSNSNSNKRIRLGPWCDSVTSESTRSVVLIE 151
Query: 152 EQGLRLITLLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVL 211
E G+RL+ L+ CA A+ ++NL A ++ + +A+ + +V YFA+A+A R+
Sbjct: 152 ETGVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMG-KVATYFAEALARRIY 210
Query: 212 NSWLGICSPLTNHKSVHCAFQV-FNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIM 270
+ + + + Q+ F + P++KFAHFT+NQAILEA VH+IDL +
Sbjct: 211 RIHPSAAAIDPSFEEI---LQMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLN 267
Query: 271 QGLQWPALFHILATRNEGPPHLRMTGMG--TSMEVLLETGKQLFNFAKRLGLSFEFHPIA 328
QG+QWPAL LA R GPP R+TG+G ++ E + E G +L A+ +G+ F+F+ +
Sbjct: 268 QGMQWPALMQALALRPGGPPSFRLTGVGNPSNREGIQELGWKLAQLAQAIGVEFKFNGLT 327
Query: 329 -KKFGDIDASMLQLR-RGETLAVHWL--QHSLYDATGPDWKTLRLLEELSPRVVTLVEQE 384
++ D++ M + R ETL V+ + H + G K L ++ + P +VT+VEQE
Sbjct: 328 TERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPGSIEKLLATVKAVKPGLVTVVEQE 387
Query: 385 ISHGGD 390
+H GD
Sbjct: 388 ANHNGD 393
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 44/167 (26%), Positives = 73/167 (43%)
Query: 322 FEFHPIAKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLV 381
FE HP+ + G I+ + ++ + V ++ + G D R E L + +
Sbjct: 354 FELHPVLSQPGSIEKLLATVKAVKPGLVTVVEQEA-NHNG-DVFLDRFNEAL--HYYSSL 409
Query: 382 EQEISHGGDDPNRHRV-EHCLLYREINNILAIGGPAR-SGEDKFKHWRSELARCNGFAQV 439
+ G P++ RV L R+I N++A G R + WR + GF V
Sbjct: 410 FDSLEDGVVIPSQDRVMSEVYLGRQILNLVATEGSDRIERHETLAQWRKRMGSA-GFDPV 468
Query: 440 PMSGNSMAQAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASSW 486
+ ++ QA L+L + GY + DG+LML W+ L AS+W
Sbjct: 469 NLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAW 515
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 317 (116.6 bits), Expect = 9.2e-33, Sum P(2) = 9.2e-33
Identities = 103/351 (29%), Positives = 171/351 (48%)
Query: 98 CEDNSIIPSVLGD----LRPR-KMMRISYDGEESFSWSNEQQLGVNQSNINCESHNKLDE 152
C+ +I S++GD + P + + + +D E N G++ ++ K DE
Sbjct: 42 CDFRDVIESIMGDEGAMMEPESEAVPMLHDQE---GLCNSASTGLSVADGVSFGEPKTDE 98
Query: 153 -QGLRLITLLLECAVAISVDNLG-EAHRMLL-ELTQMASPYGPSCAERVVAYFAKAMASR 209
+GLRL+ LL+ A A + N E R++L L + SP + ER+ A+F + S+
Sbjct: 99 SKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFTNGL-SK 157
Query: 210 VLNSWLGICSPLTNHKSVH------CAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDRVH 263
+L +C P + V+ AF++ N+SP++ F + T+ QAILEA R+H
Sbjct: 158 LLERDSVLC-PQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYERRIH 216
Query: 264 IIDLDIMQGLQWPALFHILATRNEGPP--HLRMTGMGT------SMEVLLETGKQLFNFA 315
I+D DI +G+QW +L L +RN GP HLR+T + S+ + ETG++L FA
Sbjct: 217 IVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFA 276
Query: 316 KRLGLSFEFHPIAKKFGDIDASMLQLRRGETLAVHWLQH-SLYDATGPDWKTLRLLEE-- 372
+G F + S L+L RGE + ++ + H + P + L E
Sbjct: 277 DSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVINCMLHLPRFSHQTPS-SVISFLSEAK 335
Query: 373 -LSPRVVTLVEQEISHGGDDPNRHRVEHCL-----LYREINNILAIGGPAR 417
L+P++VTLV +E+ G+ +R L ++ + L+I PAR
Sbjct: 336 TLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPAR 386
Score = 94 (38.1 bits), Expect = 9.2e-33, Sum P(2) = 9.2e-33
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 421 DKFKHWRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSL 480
+ F W L NGF + +S + QA+L+L++F + G L+LGWK L
Sbjct: 413 ESFASWPQWL-ETNGFKPLEVSFTNRCQAKLLLSLFNDGFRVEEL-GQNGLVLGWKSRRL 470
Query: 481 FTASSWTS 488
+AS W S
Sbjct: 471 VSASFWAS 478
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 297 (109.6 bits), Expect = 2.0e-31, Sum P(3) = 2.0e-31
Identities = 77/217 (35%), Positives = 122/217 (56%)
Query: 180 LLELTQMASPYGPSCAERVVAYFAKAMASRVLNSWLGICSPLTNHKSVHCAFQVFNNVSP 239
L+ + + S G +RV YFA+A++ + S S ++ + +++ N+ P
Sbjct: 195 LIRIKESVSESGDPI-QRVGYYFAEALSHKETES--PSSSSSSSLEDFILSYKTLNDACP 251
Query: 240 FIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPP-HLRMTG-- 296
+ KFAH T+NQAILEA ++ + +HI+D I QG+QW AL LATR+ G P +R++G
Sbjct: 252 YSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGIP 311
Query: 297 ---MGTSM-EVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLRRGETLAVHWL 352
+G S L+ TG +L +FA L L+FEF+P+ ++ S ++ E L V+++
Sbjct: 312 APSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVLVVNFM 371
Query: 353 Q--HSLYDATGPDWKT-LRLLEELSPRVVTLVEQEIS 386
+ L D T T LRL L+PR+VTL E E+S
Sbjct: 372 LELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVS 408
Score = 97 (39.2 bits), Expect = 2.0e-31, Sum P(3) = 2.0e-31
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 390 DDPNRHRVEHCLLYREINNILAIGG----PA-RSG--EDKFKHWRSELARCNGFAQVPMS 442
D R RVE L R I +++ P R G E+K + WR + + GF V S
Sbjct: 439 DSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEK-EQWRVLMEKA-GFEPVKPS 496
Query: 443 GNSMAQAQLILNMFPPAHGYSLIPGD-GTLMLGWKGTSLFTASSW 486
+++QA+L+L + + YSL+ + G + L W L T SSW
Sbjct: 497 NYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSW 541
Score = 49 (22.3 bits), Expect = 2.0e-31, Sum P(3) = 2.0e-31
Identities = 24/76 (31%), Positives = 29/76 (38%)
Query: 16 QHYEQWDYPSIGFPNPC-----PNSFTKPPP---PPLAVIDNRSVNLERNELSEWVEHIT 67
Q W PS GF P P T P P L N +V E + EW+E
Sbjct: 37 QEPNPWPNPSFGFTLPGSGFSDPFQVTNDPGFHFPHLEHHQNAAVASEEFDSDEWME--- 93
Query: 68 KQLIDDMPDSSTNNAD 83
LI+ D+S N D
Sbjct: 94 -SLING-GDASQTNPD 107
Score = 45 (20.9 bits), Expect = 5.3e-31, Sum P(3) = 5.3e-31
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 30 NPCPNSFTKPPPPP 43
+P P S PPPPP
Sbjct: 153 SPSPPSPQHPPPPP 166
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 296 (109.3 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 98/337 (29%), Positives = 157/337 (46%)
Query: 71 IDDMPDSSTNNADHGLQPDHHHTTIGPCEDNSI--IPSVLGDLRPRKM----MRISYDGE 124
++ PDS NA L + T G C + + + ++ M + + D
Sbjct: 37 LEPFPDSPPYNA---LSTATYDDTCGSCVTDELNDFKHKIREIETVMMGPDSLDLLVDCT 93
Query: 125 ESFSWSNEQQLGVNQSNINCESHNKLDEQGLRLITLLLECAVAISVDNLGEAHRMLLELT 184
+SF + Q++ +S + S L L+ CA A+S ++L AH M+ +L
Sbjct: 94 DSFDSTASQEINGWRSTLEAISRRDLRAD-------LVSCAKAMSENDLMMAHSMMEKLR 146
Query: 185 QMASPYGPSCAERVVAYFAKAMASRVLNSWLGICSPLTN-----HKSVHCAFQVFNNVSP 239
QM S G +R+ AY + + +++ +S I L + + V P
Sbjct: 147 QMVSVSGEPI-QRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSYMHILYEVCP 205
Query: 240 FIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMG- 298
+ KF + ++N AI EA +RVHIID I QG QW L A R GPP +R+TG+
Sbjct: 206 YFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDD 265
Query: 299 -TSMEV----LLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLRRGETLAVHW-- 351
TS L G +L AK+ + FEF+ ++ ++ L +R GE LAV++
Sbjct: 266 MTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAF 325
Query: 352 -LQHSLYDATGPDW---KTLRLLEELSPRVVTLVEQE 384
L H ++ + + LR+++ LSP+VVTLVEQE
Sbjct: 326 VLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQE 362
Score = 100 (40.3 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 33/121 (27%), Positives = 51/121 (42%)
Query: 368 RLLEELSPRVVTLVEQEISHGGDDPNRHRVE-HCLLYREINNILAIGGPAR-SGEDKFKH 425
R +E ++ +++ D R VE HCL R++ NI+A G R +
Sbjct: 373 RFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLA-RDVVNIIACEGADRVERHELLGK 431
Query: 426 WRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASS 485
WRS GF P+S + + +L + + Y L DG L LGW L + +
Sbjct: 432 WRSRFGMA-GFTPYPLSPLVNSTIKSLLRNY--SDKYRLEERDGALYLGWMHRDLVASCA 488
Query: 486 W 486
W
Sbjct: 489 W 489
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 294 (108.6 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 85/266 (31%), Positives = 144/266 (54%)
Query: 130 SNEQQL-GVNQSNINCESHNKLDEQGLRLITLLLECAVAISVDNLGEAHRMLLELTQMAS 188
SN ++ G ++ + + +K + LR TLL+ CA A+SVD+ A+ ML ++ + +S
Sbjct: 367 SNGAKIRGKKSTSTSHSNDSKKETADLR--TLLVLCAQAVSVDDRRTANEMLRQIREHSS 424
Query: 189 PYGPSCAERVVAYFAKAMASRVLNSWLGICSPLTNHKSVHC----AFQVFNNVSPFIKFA 244
P G +ER+ YFA ++ +R+ + I + L++ K+ A+Q + +V PF K A
Sbjct: 425 PLGNG-SERLAHYFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQTYMSVCPFKKAA 483
Query: 245 HFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILA-TRNEGPPHLRMTGMGTSM-- 301
+N +++ + +HIID I G QWPAL H L+ +R G P LR+TG+
Sbjct: 484 IIFANHSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRG 543
Query: 302 ----EVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLRRGETLAVHWLQH--S 355
E + ETG +L + +R + FE++ IA+K+ I L+LR+GE + V+ L +
Sbjct: 544 FRPAEGVQETGHRLARYCQRHNVPFEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRN 603
Query: 356 LYDAT----GPDWKTLRLLEELSPRV 377
L D T P L+L+ +++P V
Sbjct: 604 LLDETVLVNSPRDAVLKLIRKINPNV 629
Score = 103 (41.3 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 30/104 (28%), Positives = 48/104 (46%)
Query: 390 DDPNRHRVEHCLLYREINNILAIGGPAR-SGEDKFKHWRSELARCNGFAQVPMSGNSMAQ 448
+D R E REI N++A G R + +K W++ L R GF Q+P+ M
Sbjct: 669 EDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRA-GFRQLPLEKELMQN 727
Query: 449 AQL-ILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASSWTSHAS 491
+L I N + + + L+ GWKG ++ +S W +S
Sbjct: 728 LKLKIENGYDK--NFDVDQNGNWLLQGWKGRIVYASSLWVPSSS 769
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 272 (100.8 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 86/276 (31%), Positives = 136/276 (49%)
Query: 128 SWSNEQQLGVNQSNINCESHNKLD--EQGLRLITLLLECAVAISVDNLGEAHRMLLELTQ 185
S++N+ G ++ + ++ +G L +L ECA A+ +L ++ +L Q
Sbjct: 197 SYNNQGGFGQQHGVVSSAMYRSMEMISRG-DLKGVLYECAKAVENYDLEMTDWLISQLQQ 255
Query: 186 MASPYGPSCAERVVAYFAKAMASRVLNSWLGI-----CSPLTNHKSVHCAFQVFNNVSPF 240
M S G +R+ AY + + +R+ +S I C T + + + P+
Sbjct: 256 MVSVSGEP-VQRLGAYMLEGLVARLASSGSSIYKALRCKDPTGPELL-TYMHILYEACPY 313
Query: 241 IKFAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTS 300
KF + ++N AI EA VHIID I QG QW +L L R GPP++R+TG+
Sbjct: 314 FKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDP 373
Query: 301 MEVL-----LE-TGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLRRGETLAVHW--L 352
LE G++L A+ G+ FEFH A +++ L +R GE LAV++ +
Sbjct: 374 RSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLV 433
Query: 353 QHSLYD--ATGPDWKT--LRLLEELSPRVVTLVEQE 384
H + D T + + LRL++ LSP VVTLVEQE
Sbjct: 434 LHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQE 469
Score = 123 (48.4 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 36/121 (29%), Positives = 54/121 (44%)
Query: 368 RLLEELSPRVVTLVEQEISHGGDDPNRHRVE-HCLLYREINNILAIGGPARSGE-DKFKH 425
R +E ++ + ++ D R VE HCL RE+ N++A G R +
Sbjct: 480 RFVETMNHYLAVFESIDVKLARDHKERINVEQHCLA-REVVNLIACEGVEREERHEPLGK 538
Query: 426 WRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASS 485
WRS GF P+S A + +L + + Y+L DG L LGWK L T+ +
Sbjct: 539 WRSRFHMA-GFKPYPLSSYVNATIKGLLESY--SEKYTLEERDGALYLGWKNQPLITSCA 595
Query: 486 W 486
W
Sbjct: 596 W 596
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 248 (92.4 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 75/270 (27%), Positives = 130/270 (48%)
Query: 130 SNEQQLGVNQSNINCESHNKLDEQGLRLITLLLECAVAISVDNLGEAHRMLLELTQMASP 189
S + G + + N +K + LR +LL +CA A++ + A L E+ +S
Sbjct: 199 STPNRAGRAKGSSNKSKTHKTNTVDLR--SLLTQCAQAVASFDQRRATDKLKEIRAHSSS 256
Query: 190 YGPSCAERVVAYFAKAMASRVL-NSWLGICSPL----TNHKSVHCAFQVFNNVSPFIKFA 244
G +R+ YFA+A+ +R+ N + +P T+ + A+++F + P
Sbjct: 257 NGDG-TQRLAFYFAEALEARITGNISPPVSNPFPSSTTSMVDILKAYKLFVHTCPIYVTD 315
Query: 245 HFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSM--- 301
+F +N++I E + ++HI+D ++ G QWP L L+ R GPP LR+TG+
Sbjct: 316 YFAANKSIYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRVTGIELPQAGF 375
Query: 302 ---EVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLRRGETLAVHWLQHSLY- 357
+ + ETG++L F + + FEF+ IAKK+ I L + GET V+ + Y
Sbjct: 376 RPSDRVEETGRRLKRFCDQFNVPFEFNFIAKKWETITLDELMINPGETTVVNCIHRLQYT 435
Query: 358 -DAT----GPDWKTLRLLEELSPRVVTLVE 382
D T P L+L +++P + E
Sbjct: 436 PDETVSLDSPRDTVLKLFRDINPDLFVFAE 465
Score = 105 (42.0 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 31/103 (30%), Positives = 48/103 (46%)
Query: 387 HGGDD-PNRHRVEHCLLYREINNILAIGGPARSGE-DKFKHWRSELARCNGFAQVPMSGN 444
H D+ NR +E LL R+ ++++ G R + +K WR + R GF +S
Sbjct: 498 HAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRA-GFKPATISKQ 556
Query: 445 SMAQAQLILNMFPPAHGYSLIPGDGTLML-GWKGTSLFTASSW 486
M +A+ I+ H +I D ML GWKG ++ S W
Sbjct: 557 IMKEAKEIVRK--RYHRDFVIDSDNNWMLQGWKGRVIYAFSCW 597
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 261 (96.9 bits), Expect = 7.1e-24, Sum P(2) = 7.1e-24
Identities = 96/308 (31%), Positives = 152/308 (49%)
Query: 106 SVLGDLRPRKMMRIS----YDGEESFSWSNEQQLGVNQSNINCESHNKLD-EQGLRLIT- 159
++LGD KM+ I D E S+ +EQ + + + +S++ + ++ + T
Sbjct: 164 ALLGD-EDDKMVGIDNLMEIDSEWSYQNESEQHQDSPKESSSADSNSHVSSKEVVSQATP 222
Query: 160 --LLLECAVAISVDNLGEAHRMLLELTQMASPYG-PSCAERVVAYFAKAMASRVLNSWLG 216
+L+ CA A+S L EA M+ EL Q+ S G PS +R+ AY + +A+R+ S
Sbjct: 223 KQILISCARALSEGKLEEALSMVNELRQIVSIQGDPS--QRIAAYMVEGLAARMAASGKF 280
Query: 217 I-----CSPLTNHKSVHCAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQ 271
I C + + + A QV V P KF +N AILEA + VHIID DI Q
Sbjct: 281 IYRALKCKEPPSDERL-AAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQ 339
Query: 272 GLQWPALFHILATRNEGPPHLRMTGMGTSMEV------LLETGKQLFNFAKRLGLSFEFH 325
G Q+ L +A P LR+TG+ V L G +L A+ G+SF+F
Sbjct: 340 GNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFK 399
Query: 326 PIAKKFGDIDASMLQLRRGETLAVHW---LQH----SLYDATGPDWKTLRLLEELSPRVV 378
+ K + S L + GETL V++ L H S+ D + L +++ L+P++V
Sbjct: 400 AMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRD-ELLHMVKSLNPKLV 458
Query: 379 TLVEQEIS 386
T+VEQ+++
Sbjct: 459 TVVEQDVN 466
Score = 84 (34.6 bits), Expect = 7.1e-24, Sum P(2) = 7.1e-24
Identities = 31/99 (31%), Positives = 41/99 (41%)
Query: 390 DDPNRHRVEHCLLYREINNILAIGGPARSGE-DKFKHWRSELARCNGFAQVPMSGNSMAQ 448
+ R VE L R+I NI+A G R + WR+ + GF PMS
Sbjct: 497 ESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMA-GFNPKPMSAKVTNN 555
Query: 449 AQ-LILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASSW 486
Q LI + + Y L G L W+ SL AS+W
Sbjct: 556 IQNLIKQQY--CNKYKLKEEMGELHFCWEEKSLIVASAW 592
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 250 (93.1 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 70/246 (28%), Positives = 123/246 (50%)
Query: 152 EQGLRLITLLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVL 211
+Q + + LL++CA A++ + A L E+ + +S +G + +R+ +FA+A+ +R+
Sbjct: 204 DQPVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDA-TQRLGYHFAEALEARIT 262
Query: 212 NSW---LGICSPLTNHKSVHCAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLD 268
+ + S T+ + A++ F P + +FT+N+ I E + +HIID
Sbjct: 263 GTMTTPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKATTLHIIDFG 322
Query: 269 IMQGLQWPALFHILATRNEGPPHLRMTGMGTSM------EVLLETGKQLFNFAKRLGLSF 322
I+ G QWP L L+ R+ GPP LR+TG+ E + ETG++L F + + F
Sbjct: 323 ILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPF 382
Query: 323 EFHPIAKKFGDIDASMLQLRRGETLAVHWLQHSLY--DAT----GPDWKTLRLLEELSPR 376
E+ IAK + +I L + GET V+ + Y D T P L+L +++P
Sbjct: 383 EYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPD 442
Query: 377 VVTLVE 382
+ E
Sbjct: 443 LFVFAE 448
Score = 90 (36.7 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 28/99 (28%), Positives = 43/99 (43%)
Query: 390 DDPNRHRVEHCLLYREINNILAIGGPARSGE-DKFKHWRSELARCNGFAQVPMSGNSMAQ 448
DD R VE L+ R+ +++A G R + +K W+ + R GF +S +
Sbjct: 483 DDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRA-GFRPAKLSKQIVKD 541
Query: 449 AQLILNMFPPAHGYSLIPGDGTLML-GWKGTSLFTASSW 486
+ I+ H +I D M GWKG L+ S W
Sbjct: 542 GKEIVK--ERYHKDFVIDNDNHWMFQGWKGRVLYAVSCW 578
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 273 (101.2 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 75/257 (29%), Positives = 129/257 (50%)
Query: 159 TLLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVLNSWLGIC 218
++LLE A A S + A ++L L +++SPYG + +++ +YF +A+ +R+ S
Sbjct: 145 SVLLEAARAFSDKDTARAQQILWTLNELSSPYGDT-EQKLASYFLQALFNRMTGSGERCY 203
Query: 219 SPLTNHKSVH--CAFQV-------FNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDI 269
+ + C+F+ F VSP+ F H +N AILEA ++HI+D+
Sbjct: 204 RTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISS 263
Query: 270 MQGLQWPALFHILATRNEGPPHLRMTGM----------GTSMEVLLETGKQLFNFAKRLG 319
QWP L LATR++ PHLR+T + S ++ E G ++ FA+ +G
Sbjct: 264 TFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMG 323
Query: 320 LSFEFHPIAKKFGDI---DASMLQLRRGETLAVHWL--QHSLYDATGPDWKTLRLLEELS 374
+ F+F+ I GD+ D + L ++ E LA++ + H + P + L
Sbjct: 324 VPFKFN-IIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSPRDAVISSFRRLR 382
Query: 375 PRVVTLVEQEISHGGDD 391
PR+VT+VE+E G++
Sbjct: 383 PRIVTVVEEEADLVGEE 399
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 229 (85.7 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 63/207 (30%), Positives = 106/207 (51%)
Query: 159 TLLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRV-------L 211
TLL CA ++S + A +L ++ + SP G + ++R+ +FA A+ +R+ +
Sbjct: 317 TLLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDA-SQRLAHFFANALEARLEGSTGTMI 375
Query: 212 NSWL-GICSPLTNHKSVHCAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIM 270
S+ I S + ++ VF + SPF+ +F SN+ IL+A +HI+D I+
Sbjct: 376 QSYYDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGIL 435
Query: 271 QGLQWPALFHILATRNEGPPHLRMTGMGTSM------EVLLETGKQLFNFAKRLGLSFEF 324
G QWP L+ N G LR+TG+ E + +TG++L + KR G+ FE+
Sbjct: 436 YGFQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEY 495
Query: 325 HPIAKK-FGDIDASMLQLRRGETLAVH 350
+ IA K + I ++R E LAV+
Sbjct: 496 NAIASKNWETIKMEEFKIRPNEVLAVN 522
Score = 93 (37.8 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 25/98 (25%), Positives = 43/98 (43%)
Query: 390 DDPNRHRVEHCLLYREINNILAIGGPAR-SGEDKFKHWRSELARCNGFAQVPMSGNSMAQ 448
++P R E RE+ N++A G R + +K W+ + R GF Q P+ +
Sbjct: 596 ENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRA-GFKQKPVEAELVQL 654
Query: 449 AQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASSW 486
+ + + + L + GWKG LF++S W
Sbjct: 655 FREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCW 692
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 236 (88.1 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 67/214 (31%), Positives = 112/214 (52%)
Query: 157 LITLLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVLNS--- 213
L +LL+ CA A++ D+ A ++L ++ ++P+G +R+ FA + +R+ +
Sbjct: 344 LRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDG-NQRLAHCFANGLEARLAGTGSQ 402
Query: 214 -WLGICSPLTNHKSVHCAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQG 272
+ GI S + +V A Q+F PF K ++F +N+ I + RVH+ID I+ G
Sbjct: 403 IYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYG 462
Query: 273 LQWPALFHILATRNEGPPHLRMTGM-----G-TSMEVLLETGKQLFNFAKRLGLSFEFHP 326
QWP L H + G P +R+TG+ G + + ETG++L +AK G+ FE+
Sbjct: 463 FQWPTLIHRFSMY--GSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKA 520
Query: 327 IAKKFGDIDASMLQLRRGETLAVHWLQHS--LYD 358
IAKK+ I L + R E V+ L + L+D
Sbjct: 521 IAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHD 554
Score = 83 (34.3 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 390 DDPNRHRVEHCLLYREINNILAIGGPAR-SGEDKFKHWRSELARCNGFAQVPMSGNSMAQ 448
+D R +E + RE N++A G R + +K W R +G QVP + M
Sbjct: 617 EDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMR-SGLVQVPFDPSIMKT 675
Query: 449 AQLILNMFPPAHGYSLIPGDGTLML-GWKGTSLFTASSW 486
+ ++ F H +I D +L GWKG ++ S W
Sbjct: 676 SLHKVHTF--YHKDFVIDQDNRWLLQGWKGRTVMALSVW 712
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 212 (79.7 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 68/221 (30%), Positives = 105/221 (47%)
Query: 197 RVVAYFAKAMASRVLNSWLG--ICSPLTNHKSVHCAFQVFNNVSPFIKFAHFTSNQAILE 254
R +Y +A+ S + +S L SP N A++ F+ SPF++F +FT+NQ ILE
Sbjct: 294 RAASYITEALHSLLQDSSLSPPSLSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQTILE 353
Query: 255 AFHRRDRVHIIDLDIMQGLQWPALFHILA---TRNEGPPHLRMTGMGTSMEVLLE----- 306
+F DR+HI+D DI G QW +L LA R+ P L++T + V E
Sbjct: 354 SFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSDEFELRF 413
Query: 307 TGKQLFNFAKRLGLSFEFHPIAKKF----GDIDASMLQLRRGETLAVHWLQHSLYDATGP 362
T + L +FA G+SFE + + S+ + E +AV+ S+ P
Sbjct: 414 TEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVNLPISSMVSGYLP 473
Query: 363 DWKTLRLLEELSPRVVTLVEQEISHGGDDPNRHRVEHCLLY 403
LR L+++SP VV ++ D P + V + L Y
Sbjct: 474 --LILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQY 512
Score = 78 (32.5 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 426 WRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAHGYSLIPGDGT---LMLGWKGTSLFT 482
WRS +C GF V +S + QA+ +L P G+ L + L+L W+ L T
Sbjct: 560 WRSLFGQC-GFTPVTLSQTAETQAEYLLQR-NPMRGFHLEKRQSSSPSLVLCWQRKELVT 617
Query: 483 ASSW 486
S+W
Sbjct: 618 VSAW 621
Score = 41 (19.5 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 30 NPCPNSFTKPPPPPLA 45
NP P F+ PP P A
Sbjct: 178 NPNPGFFSDPPSSPPA 193
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 200 (75.5 bits), Expect = 6.9e-17, Sum P(3) = 6.9e-17
Identities = 75/248 (30%), Positives = 120/248 (48%)
Query: 161 LLECAVAISVDNLGEAHRMLLELTQ-MASPYGPSCAERVVAYFAKAMASRVLNSWLGICS 219
L++ A I D A +L L Q ++SP G ER YF +A+ + +L++ +
Sbjct: 209 LVKAAEVIESDTC-LAQGILARLNQQLSSPVGKPL-ERAAFYFKEAL-NNLLHNVSQTLN 265
Query: 220 PLTNHKSVHCAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALF 279
P + + A++ F+ +SP ++FA+FTSNQA+LE+FH R+HIID DI G QW +L
Sbjct: 266 PYSLIFKI-AAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWASLM 324
Query: 280 HILATR-NEGPPHLRMTGMGT-SMEVLLETG---KQLFNFAKRLGLSFEFHPIAKKF-GD 333
L R N P L++T + + LE G L +FA + +S + ++ G
Sbjct: 325 QELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASEINISLDIQVLSLDLLGS 384
Query: 334 IDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVEQEISHGGDDPN 393
I S E +AV+ S P LR ++ LSP ++ ++ D P
Sbjct: 385 I--SWPNSSEKEAVAVNISAASFSHL--P--LVLRFVKHLSPTIIVCSDRGCERT-DLPF 437
Query: 394 RHRVEHCL 401
++ H L
Sbjct: 438 SQQLAHSL 445
Score = 77 (32.2 bits), Expect = 6.9e-17, Sum P(3) = 6.9e-17
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 396 RVEHCLLYREINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMSGNSMAQAQLILNM 455
++E L+ EI ++ +R E W++ + GF+ V S + +QA+ ++
Sbjct: 467 KIERFLIQPEIEKLVL--DRSRPIERPMMTWQAMFLQM-GFSPVTHSNFTESQAECLVQR 523
Query: 456 FPPAHGYSLIPGDGTLMLGWKGTSLFTASSWTSHAS 491
P G+ + +L+L W+ T L S+W +S
Sbjct: 524 -TPVRGFHVEKKHNSLLLCWQRTELVGVSAWRCRSS 558
Score = 45 (20.9 bits), Expect = 6.9e-17, Sum P(3) = 6.9e-17
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 18 YEQWDYPSIGFPNPCPNSFTKPPPPPLAVIDNRSVNLERNELSEWVEHITKQLIDDM--P 75
+E++ I + +SF +PP PL + +R E E ++D + P
Sbjct: 5 FEEFQGKGISCFSSFSSSFPQPPSSPL--LSHRKARGGEEEEEEVPAAEPTSVLDSLISP 62
Query: 76 -DSSTNNADHG 85
SST ++ HG
Sbjct: 63 TSSSTVSSSHG 73
Score = 41 (19.5 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 13/52 (25%), Positives = 20/52 (38%)
Query: 42 PPLAVIDNRSVNLERNELSEWVEHITKQLIDDMPDSSTNNADHGLQPDHHHT 93
P V+D L+ + + H++ LI+ T N HHHT
Sbjct: 143 PGFGVVDT-GFGLDHHSVPP--SHVSGLLINQSQTHYTQNPAAIFYGHHHHT 191
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 193 (73.0 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 58/199 (29%), Positives = 99/199 (49%)
Query: 160 LLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVLNSWLGICS 219
LLL CA AI ++ H++L L +A P G S +R+ + F +A+ SR ++ + S
Sbjct: 30 LLLHCATAIDSNDAALTHQILWVLNNIAPPDGDS-TQRLTSAFLRALLSRAVSKTPTLSS 88
Query: 220 PLTN-------HKSVHCAFQVFNNVSPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQG 272
++ H+ F +++P+ +F +N AIL A VHI+DL +
Sbjct: 89 TISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHC 148
Query: 273 LQWPALFHILATR-NEGPPHLRMTGMGTS------MEVLLET-GKQLFNFAKRLGLSFEF 324
+Q P L +A+R N+ PP L++T + +S + + E G +L NFA ++ EF
Sbjct: 149 MQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEF 208
Query: 325 HPIAKKFGDIDASMLQLRR 343
+ + D +S+LQ R
Sbjct: 209 TIVPSTYSDGFSSLLQQLR 227
Score = 68 (29.0 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 405 EINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAHGYSL 464
+I N++A G R + K E R F V + +++A + +L G
Sbjct: 326 KIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKK 385
Query: 465 IPGDGTLMLGWKGTSLFTASSW 486
D +L+L WKG S+ A+ W
Sbjct: 386 EDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 192 (72.6 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 73/253 (28%), Positives = 118/253 (46%)
Query: 160 LLLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVLNSWLGICS 219
LL CA+AI+ N L L+++AS G + R+ A+ +A+ + +S +
Sbjct: 148 LLNPCALAITASNSSRVQHYLCVLSELASSSGDA-NRRLAAFGLRALQHHLSSSSVSSSF 206
Query: 220 -PLTNHKSVHCA-FQV----FNNVSPFIKFAHFTSNQAILEAFHR--RDR--VHIIDLDI 269
P+ S FQ F VSP+ + +N AIL+ + +D+ +HIID+ +
Sbjct: 207 WPVFTFASAEVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPKDKKDLHIIDIGV 266
Query: 270 MQGLQWPALFHILATRNEGPP-HLRMTGMGT-SMEVLLETG-------KQLFNFAKRLGL 320
G+QWP L L+ R EGPP +R+T + + ++ G QL FA+ L +
Sbjct: 267 SHGMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFSVGPPGYNYGSQLLGFARSLKI 326
Query: 321 SFEFHPIAKKFGDIDASMLQ-LRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVT 379
+ + + K ID S + L +H L+HS+ D G +TL+ + L P+ V
Sbjct: 327 NLQIS-VLDKLQLIDTSPHENLIVCAQFRLHHLKHSINDERG---ETLKAVRSLRPKGVV 382
Query: 380 LVEQ--EISHGGD 390
L E E S D
Sbjct: 383 LCENNGECSSSAD 395
Score = 54 (24.1 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 19/89 (21%), Positives = 34/89 (38%)
Query: 398 EHCLLYREINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMSGNSMAQAQLILNMFP 457
E L+ E +L G G++K W + F + +++ A+ +L +
Sbjct: 425 ERKLMEGEATKVLMNAGDMNEGKEK---WYERMREAGFFVEA-FEEDAVDGAKSLLRKYD 480
Query: 458 PAHGYSLIPGDGTLMLGWKGTSLFTASSW 486
+ GD L WKG ++ S W
Sbjct: 481 NNWEIRMEDGDTFAGLMWKGEAVSFCSLW 509
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 175 (66.7 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 78/326 (23%), Positives = 143/326 (43%)
Query: 72 DDMPDSSTNNA--DHGLQPDHHHTTIGPCEDNSIIPS--VLGDLRPRKMMRISYDGEESF 127
D+ P ++TNN+ + L D H + + +SI+ V D P ++ S++
Sbjct: 10 DNQPSNTTNNSTDSNHLSMDEH--AMRSMDWDSIMKELEVDDDSAPYQLQPSSFNLPVFP 67
Query: 128 SW-SNEQQLGVNQ-SNINCESHNKLDEQGLRLITLLLECAVAISVDNLGEAHRMLLELTQ 185
S++ G NQ + S + +D G I L+ I D L AH +L +L Q
Sbjct: 68 DIDSSDVYPGPNQITGYGFNSLDSVDNGGFDYIEDLIRVVDCIESDELHLAHVVLSQLNQ 127
Query: 186 MASPYGPSCAERVVAYFAKAMASRVLNSWLGICSPLTNHKSVHCAFQVFNNVSPFIKFAH 245
+R YF +A+ S + + ++ A + F+ +SP F+H
Sbjct: 128 RLQTSAGRPLQRAAFYFKEALGSLLTGTNRNQLFSWSDIVQKIRAIKEFSGISPIPLFSH 187
Query: 246 FTSNQAILEAFHRRDR---VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSME 302
FT+NQAIL++ + VH++D +I G Q+ +L +A ++ LR+T + + +
Sbjct: 188 FTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREIAEKSANGGFLRVTAV-VAED 246
Query: 303 VLLETG---KQLFNFAKRLGLSFEFH-PIAKKFGDIDASMLQLRRGETLAVHWLQHSLYD 358
+ET + L FA + + F+ + K F + ++ GE V + +++
Sbjct: 247 CAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFEILSFKAIRFVDGERTVV-LISPAIFR 305
Query: 359 ATGPDWKTLRLLEELSPRVVTLVEQE 384
+ + L +SP VV V+ E
Sbjct: 306 RVIGIAEFVNNLGRVSPNVVVFVDSE 331
Score = 68 (29.0 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 25/90 (27%), Positives = 37/90 (41%)
Query: 397 VEHCLLYREINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMSGNSMAQAQLILNMF 456
VE LL +I+ + RS WR L G V +S + QA+ +L
Sbjct: 374 VETFLLRPKISAAVETAANRRSAGQMT--WREMLCAA-GMRPVQLSQFADFQAECLLEK- 429
Query: 457 PPAHGYSLIPGDGTLMLGWKGTSLFTASSW 486
G+ + G L+L W G +L S+W
Sbjct: 430 AQVRGFHVAKRQGELVLCWHGRALVATSAW 459
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 167 (63.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 68/227 (29%), Positives = 110/227 (48%)
Query: 196 ERVVAYFAKAMASRVLNSWLGICSPLTNHKSVH---CAFQVFNNVSPFIKFAHFTSNQAI 252
+R ++ A+A+ S + N PL +++ A++ F+ SPF++F +FT+NQ+I
Sbjct: 315 QRAASHIAEALLSLIHNE---SSPPLITPENLILRIAAYRSFSETSPFLQFVNFTANQSI 371
Query: 253 LEAFHRR--DRVHIIDLDIMQGLQWPALFHILAT-----RNEGPPHLRMTGMG-----TS 300
LE+ + DR+HIID D+ G QW +L LA+ R L++T S
Sbjct: 372 LESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVS 431
Query: 301 MEVLLE-TGKQLFNFAKRLGLSFEFHPIAKKFGDIDASM-LQLRRGE--TLAVHWLQHSL 356
E L T + L FA + + FE ++ + A L LR E +AV+ +S+
Sbjct: 432 DEFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVNLPVNSV 491
Query: 357 YDATGPDWKTLRLLEELSPRVVTLVEQEISHGGDDPNRHRVEHCLLY 403
A+G LR L++LSP +V ++ D P + V H L Y
Sbjct: 492 --ASGYLPLILRFLKQLSPNIVVCSDRGCDRN-DAPFPNAVIHSLQY 535
Score = 80 (33.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 426 WRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASS 485
WR +C GF+ +S + AQA+ +L P G+ + +L++ W+ L T S+
Sbjct: 580 WRILFTQC-GFSPASLSQMAEAQAECLLQR-NPVRGFHVEKRQSSLVMCWQRKELVTVSA 637
Query: 486 W 486
W
Sbjct: 638 W 638
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 176 (67.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 84/352 (23%), Positives = 154/352 (43%)
Query: 48 DNRSVNLERNELS--EWVEHITKQL-IDDMPDSSTNNADHGLQPDHHHTTIGPCED-NSI 103
D+ ++++ + + +W + I K+L +DD DS+ N+ G +TI P +S
Sbjct: 22 DSNHLSMDEHVMRSMDW-DSIMKELELDD--DSAPNSLKTGFTTTTTDSTILPLYAVDSN 78
Query: 104 IPSVLGDLRPRKMMRISYDGEESFSWSNEQQLGVNQSN-INCESHNKLDEQGLRLITLLL 162
+P ++P F S++ G NQ+ S + +D G I L+
Sbjct: 79 LPGFPDQIQP-----------SDFESSSDVYPGQNQTTGYGFNSLDSVDNGGFDFIEDLI 127
Query: 163 ECAVAISVDNLGEAHRMLLELTQ-MASPYGPSCAERVVAYFAKAMASRVLNSWLGICSPL 221
+ D L A +L L Q + SP G +R YF +A+ S + S
Sbjct: 128 RVVDCVESDELQLAQVVLSRLNQRLRSPAGRPL-QRAAFYFKEALGSFLTGSNRNPIRLS 186
Query: 222 TNHKSVHC--AFQVFNNVSPFIKFAHFTSNQAILEAFHRRDR---VHIIDLDIMQGLQWP 276
+ + V A + ++ +SP F+HFT+NQAIL++ + VH++D +I G Q+
Sbjct: 187 SWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYA 246
Query: 277 ALFHILATRNEGPPHLRMTGMGTSMEVLLETG---KQLFNFAKRLGLSFEFH-PIAKKFG 332
+L + ++ LR+T + + E +ET + L FA + + F+ + K F
Sbjct: 247 SLMREITEKSVSGGFLRVTAV-VAEECAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFE 305
Query: 333 DIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVEQE 384
+ ++ GE V + +++ + L +SP+VV V+ E
Sbjct: 306 MLSFKAIRFVEGERTVV-LISPAIFRRLSGITDFVNNLRRVSPKVVVFVDSE 356
Score = 63 (27.2 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 426 WRSELARCNGFAQVPMSGNSMAQAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASS 485
WR G + +S + QA+ +L G+ + G L+L W G +L S+
Sbjct: 426 WREAFCAA-GMRPIQLSQFADFQAECLLEK-AQVRGFHVAKRQGELVLCWHGRALVATSA 483
Query: 486 W 486
W
Sbjct: 484 W 484
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 105 (42.0 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 51/189 (26%), Positives = 82/189 (43%)
Query: 161 LLECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVLNSWLGICSP 220
++E A AI+ A +L ++Q + S E++V + A+ SR I SP
Sbjct: 269 VMEIATAIAEGKTEIATEILARVSQTPNLERNS-EEKLVDFMVAALRSR-------IASP 320
Query: 221 LTN-HKSVHC-AFQVFNNVSPFIKFAHFTSNQAILEAFHRRDR----VHIIDLDIMQGLQ 274
+T + H + Q+ +SP K +N AIL+A D H+ID DI +G Q
Sbjct: 321 VTELYGKEHLISTQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFDIGEGGQ 380
Query: 275 WPALFHILATRNEGP------PHLRMTGMGTSM----------EVLLETGKQLFNFAKRL 318
+ L L+TR G P +++T + ++ E L G L RL
Sbjct: 381 YVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGDRL 440
Query: 319 GLSFEFHPI 327
G+S F+ +
Sbjct: 441 GISVSFNVV 449
Score = 80 (33.2 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 29/107 (27%), Positives = 48/107 (44%)
Query: 381 VEQEISHGGDDPNRHRVEHCLLYREINNILAIGGPARSGE-DKFKHWRSELARCNGFAQV 439
VE + D R +VE + R++ N +A G R + F WR ++ GF +
Sbjct: 539 VESTVPSTNSD--RAKVEEGI-GRKLVNAVACEGIDRIERCEVFGKWRMRMSMA-GFELM 594
Query: 440 PMSGNSMAQAQLILNMFPPAHGYSLIPGDGTLMLGWKGTSLFTASSW 486
P+S + N P G+++ +G + GW G +L AS+W
Sbjct: 595 PLSEKIAESMKSRGNRVHP--GFTVKEDNGGVCFGWMGRALTVASAW 639
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 492 492 0.00082 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 627 (67 KB)
Total size of DFA: 339 KB (2169 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.54u 0.14s 42.68t Elapsed: 00:00:03
Total cpu time: 42.55u 0.14s 42.69t Elapsed: 00:00:03
Start: Tue May 21 00:31:07 2013 End: Tue May 21 00:31:10 2013