Query 045494
Match_columns 492
No_of_seqs 162 out of 715
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 04:03:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045494.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045494hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 96.8 0.0044 1.5E-07 60.4 9.4 107 261-383 71-179 (261)
2 3dlc_A Putative S-adenosyl-L-m 96.4 0.035 1.2E-06 50.2 12.0 110 249-382 33-147 (219)
3 4a6d_A Hydroxyindole O-methylt 96.2 0.03 1E-06 56.6 11.7 162 249-441 168-331 (353)
4 3bkx_A SAM-dependent methyltra 96.2 0.15 5.2E-06 48.2 16.0 172 250-442 33-217 (275)
5 2r3s_A Uncharacterized protein 95.9 0.095 3.3E-06 51.4 13.3 161 250-441 153-320 (335)
6 3dh0_A SAM dependent methyltra 95.7 0.22 7.5E-06 45.3 14.4 147 250-441 27-178 (219)
7 3dp7_A SAM-dependent methyltra 95.6 0.17 5.7E-06 51.0 14.2 167 251-442 170-340 (363)
8 1vl5_A Unknown conserved prote 95.6 0.25 8.7E-06 46.5 14.6 155 250-440 27-186 (260)
9 3dtn_A Putative methyltransfer 95.4 0.014 4.8E-07 54.2 4.9 166 250-441 33-211 (234)
10 2aot_A HMT, histamine N-methyl 95.2 0.14 4.8E-06 49.6 11.8 161 259-440 51-217 (292)
11 1qzz_A RDMB, aclacinomycin-10- 95.2 0.15 5.2E-06 50.9 12.3 160 250-442 172-337 (374)
12 1x19_A CRTF-related protein; m 95.1 0.17 5.9E-06 50.5 12.4 162 248-441 178-345 (359)
13 3gwz_A MMCR; methyltransferase 95.0 0.21 7.3E-06 50.3 12.7 159 250-442 192-354 (369)
14 3jwh_A HEN1; methyltransferase 94.7 0.089 3E-06 48.2 8.3 116 251-384 20-142 (217)
15 3i53_A O-methyltransferase; CO 94.5 0.16 5.4E-06 50.1 10.1 154 252-441 161-318 (332)
16 3hnr_A Probable methyltransfer 94.5 0.16 5.4E-06 46.3 9.4 111 248-382 33-144 (220)
17 1kpg_A CFA synthase;, cyclopro 94.3 0.77 2.6E-05 43.8 14.2 111 251-381 55-166 (287)
18 3kkz_A Uncharacterized protein 94.3 0.7 2.4E-05 43.6 13.8 124 234-381 19-148 (267)
19 3reo_A (ISO)eugenol O-methyltr 94.3 0.22 7.5E-06 50.4 10.9 157 250-441 192-352 (368)
20 1xxl_A YCGJ protein; structura 94.2 1.4 4.7E-05 41.0 15.4 157 249-441 10-171 (239)
21 2ip2_A Probable phenazine-spec 94.2 0.4 1.4E-05 47.1 12.2 160 250-441 158-319 (334)
22 1tw3_A COMT, carminomycin 4-O- 94.1 0.36 1.2E-05 47.9 11.8 160 250-442 173-337 (360)
23 3htx_A HEN1; HEN1, small RNA m 94.1 0.21 7.3E-06 56.9 11.0 127 250-388 711-840 (950)
24 3hem_A Cyclopropane-fatty-acyl 94.0 0.7 2.4E-05 44.7 13.4 114 250-381 62-181 (302)
25 3mcz_A O-methyltransferase; ad 93.9 0.49 1.7E-05 46.8 12.2 161 251-440 169-335 (352)
26 3f4k_A Putative methyltransfer 93.9 1 3.5E-05 41.9 13.8 125 234-382 19-149 (257)
27 3mgg_A Methyltransferase; NYSG 93.7 1.4 4.9E-05 41.5 14.7 151 260-441 37-195 (276)
28 2fk8_A Methoxy mycolic acid sy 93.2 2.5 8.7E-05 40.9 15.8 109 251-381 81-192 (318)
29 3p9c_A Caffeic acid O-methyltr 93.1 0.39 1.3E-05 48.6 10.1 157 250-441 190-350 (364)
30 3lst_A CALO1 methyltransferase 93.0 0.29 1E-05 48.8 9.0 157 250-442 174-334 (348)
31 1nkv_A Hypothetical protein YJ 93.0 1.6 5.6E-05 40.4 13.7 165 238-441 14-184 (256)
32 3vc1_A Geranyl diphosphate 2-C 93.0 1.1 3.8E-05 43.6 12.9 108 250-381 106-219 (312)
33 2o57_A Putative sarcosine dime 92.9 1.6 5.3E-05 41.8 13.7 113 250-385 68-190 (297)
34 4fsd_A Arsenic methyltransfera 92.6 0.55 1.9E-05 47.6 10.5 154 260-439 83-246 (383)
35 3jwg_A HEN1, methyltransferase 92.3 0.64 2.2E-05 42.4 9.6 121 250-388 19-146 (219)
36 4htf_A S-adenosylmethionine-de 91.8 1.1 3.8E-05 42.6 11.1 109 252-382 61-172 (285)
37 2p7i_A Hypothetical protein; p 91.6 1.1 3.8E-05 40.9 10.4 104 250-381 31-139 (250)
38 3sm3_A SAM-dependent methyltra 91.5 0.4 1.4E-05 43.7 7.2 153 261-442 31-205 (235)
39 3gu3_A Methyltransferase; alph 91.0 3.9 0.00013 39.1 14.0 106 259-384 21-128 (284)
40 2p35_A Trans-aconitate 2-methy 90.7 0.83 2.8E-05 42.5 8.7 105 251-382 24-131 (259)
41 3bus_A REBM, methyltransferase 90.6 3.3 0.00011 38.8 13.0 109 250-381 51-164 (273)
42 3ocj_A Putative exported prote 90.5 1.3 4.3E-05 43.0 10.2 158 260-442 118-289 (305)
43 3m70_A Tellurite resistance pr 90.3 1.3 4.4E-05 42.2 9.9 112 250-382 110-222 (286)
44 2yqz_A Hypothetical protein TT 89.9 2.7 9.3E-05 38.9 11.6 100 259-382 38-140 (263)
45 3h2b_A SAM-dependent methyltra 89.7 1.1 3.6E-05 40.3 8.3 134 261-442 42-180 (203)
46 1fp2_A Isoflavone O-methyltran 89.5 1.1 3.7E-05 44.6 8.9 146 260-441 188-338 (352)
47 3ujc_A Phosphoethanolamine N-m 89.3 0.76 2.6E-05 42.7 7.2 121 239-381 34-157 (266)
48 3ofk_A Nodulation protein S; N 88.8 2.1 7.1E-05 38.7 9.6 111 251-382 42-153 (216)
49 3ccf_A Cyclopropane-fatty-acyl 88.7 4.3 0.00015 38.5 12.1 104 250-382 47-153 (279)
50 3e8s_A Putative SAM dependent 88.5 1.2 4E-05 40.2 7.7 160 248-442 40-207 (227)
51 3e23_A Uncharacterized protein 88.2 0.91 3.1E-05 41.1 6.7 133 261-443 44-181 (211)
52 3g5l_A Putative S-adenosylmeth 88.1 2.5 8.4E-05 39.3 9.9 110 248-382 32-144 (253)
53 2qe6_A Uncharacterized protein 87.9 4 0.00014 39.5 11.5 104 262-381 79-194 (274)
54 1zg3_A Isoflavanone 4'-O-methy 87.4 2 7E-05 42.7 9.3 156 251-441 182-344 (358)
55 1y8c_A S-adenosylmethionine-de 86.4 1.5 5.2E-05 40.0 7.2 103 260-382 37-141 (246)
56 3r0q_C Probable protein argini 85.7 2.6 8.8E-05 42.7 9.1 115 250-382 53-168 (376)
57 3hm2_A Precorrin-6Y C5,15-meth 85.7 8.1 0.00028 33.3 11.3 110 250-382 15-126 (178)
58 3thr_A Glycine N-methyltransfe 85.5 0.7 2.4E-05 44.1 4.6 120 250-382 47-174 (293)
59 3u81_A Catechol O-methyltransf 85.4 3.1 0.00011 38.2 8.8 107 260-382 58-169 (221)
60 3lcv_B Sisomicin-gentamicin re 85.4 2.1 7E-05 42.7 7.9 110 251-381 125-234 (281)
61 3p9n_A Possible methyltransfer 85.2 4.2 0.00014 36.2 9.4 110 260-387 44-157 (189)
62 3uwp_A Histone-lysine N-methyl 85.2 2.4 8.2E-05 44.7 8.7 121 249-381 162-286 (438)
63 3l8d_A Methyltransferase; stru 85.0 4.2 0.00014 37.2 9.5 141 260-441 53-197 (242)
64 1vlm_A SAM-dependent methyltra 85.0 5.9 0.0002 36.0 10.5 133 261-443 48-187 (219)
65 1fp1_D Isoliquiritigenin 2'-O- 84.5 3.2 0.00011 41.6 9.0 157 250-441 198-357 (372)
66 1wzn_A SAM-dependent methyltra 84.2 3.4 0.00012 38.2 8.6 110 253-383 34-145 (252)
67 2xvm_A Tellurite resistance pr 84.0 6.6 0.00023 34.5 10.1 110 249-381 21-134 (199)
68 3mq2_A 16S rRNA methyltransfer 83.7 1.5 5.1E-05 39.9 5.7 116 251-383 18-140 (218)
69 3lcc_A Putative methyl chlorid 83.7 4.7 0.00016 37.0 9.2 136 262-442 68-205 (235)
70 3bgv_A MRNA CAP guanine-N7 met 83.5 3.3 0.00011 40.2 8.4 115 260-382 34-154 (313)
71 3g5t_A Trans-aconitate 3-methy 83.5 3.9 0.00013 39.2 8.9 109 259-381 35-147 (299)
72 3frh_A 16S rRNA methylase; met 83.0 3.3 0.00011 40.6 8.1 101 261-383 106-206 (253)
73 3dli_A Methyltransferase; PSI- 82.9 2.8 9.7E-05 38.7 7.4 136 261-440 42-180 (240)
74 1wy7_A Hypothetical protein PH 81.4 21 0.00073 31.7 12.5 99 260-380 49-147 (207)
75 1g6q_1 HnRNP arginine N-methyl 80.9 5.8 0.0002 39.2 9.2 115 250-381 28-143 (328)
76 2yxd_A Probable cobalt-precorr 80.6 11 0.00038 32.3 10.1 105 250-382 25-130 (183)
77 3giw_A Protein of unknown func 80.1 2.4 8.2E-05 42.0 6.0 140 229-381 43-198 (277)
78 3q7e_A Protein arginine N-meth 79.9 5 0.00017 40.1 8.5 101 261-382 67-172 (349)
79 3cgg_A SAM-dependent methyltra 79.9 5.1 0.00017 34.8 7.6 132 250-441 37-172 (195)
80 3pfg_A N-methyltransferase; N, 79.7 1.8 6.3E-05 40.5 5.0 96 261-382 51-150 (263)
81 1nv8_A HEMK protein; class I a 79.0 8.7 0.0003 37.3 9.7 109 261-385 124-251 (284)
82 3eey_A Putative rRNA methylase 79.0 25 0.00085 31.0 12.1 107 262-382 24-138 (197)
83 2vdw_A Vaccinia virus capping 78.6 10 0.00035 37.1 10.2 105 261-381 49-167 (302)
84 3g07_A 7SK snRNA methylphospha 78.6 1.4 4.8E-05 42.7 3.8 48 260-314 46-93 (292)
85 2kw5_A SLR1183 protein; struct 78.4 19 0.00066 31.8 11.2 98 263-382 32-130 (202)
86 3d2l_A SAM-dependent methyltra 78.4 4.3 0.00015 37.0 6.9 108 252-382 27-136 (243)
87 3iv6_A Putative Zn-dependent a 78.3 3.1 0.00011 40.5 6.2 53 250-311 35-87 (261)
88 2y1w_A Histone-arginine methyl 77.9 5.7 0.0002 39.6 8.2 115 250-382 40-154 (348)
89 3ou2_A SAM-dependent methyltra 77.2 5.1 0.00017 35.8 6.9 106 249-381 34-144 (218)
90 3g2m_A PCZA361.24; SAM-depende 77.1 2.3 7.8E-05 40.9 4.8 114 249-382 72-189 (299)
91 2g72_A Phenylethanolamine N-me 77.1 7.2 0.00025 37.1 8.3 45 260-312 71-115 (289)
92 3fzg_A 16S rRNA methylase; met 77.0 2.3 7.8E-05 40.4 4.6 99 263-383 52-152 (200)
93 3i9f_A Putative type 11 methyl 75.8 12 0.00042 32.1 8.8 101 251-382 8-111 (170)
94 3bkw_A MLL3908 protein, S-aden 75.4 6.7 0.00023 35.7 7.4 108 249-381 32-142 (243)
95 1ri5_A MRNA capping enzyme; me 75.0 9 0.00031 36.0 8.3 107 260-382 64-173 (298)
96 4dcm_A Ribosomal RNA large sub 74.8 9.9 0.00034 38.6 9.1 119 247-382 209-333 (375)
97 3b3j_A Histone-arginine methyl 74.0 3.2 0.00011 43.8 5.3 114 250-383 148-263 (480)
98 4e2x_A TCAB9; kijanose, tetron 73.9 3.7 0.00013 41.6 5.6 107 251-382 98-207 (416)
99 1yzh_A TRNA (guanine-N(7)-)-me 73.6 21 0.00073 32.1 10.2 109 260-384 41-157 (214)
100 2ift_A Putative methylase HI07 73.5 15 0.00051 33.2 9.1 105 262-386 55-166 (201)
101 1xtp_A LMAJ004091AAA; SGPP, st 73.3 8.4 0.00029 35.4 7.5 151 250-442 83-236 (254)
102 1ve3_A Hypothetical protein PH 73.2 19 0.00064 32.3 9.7 100 261-382 39-141 (227)
103 3ege_A Putative methyltransfer 72.6 7.3 0.00025 36.6 7.0 108 250-387 24-135 (261)
104 2fyt_A Protein arginine N-meth 72.2 13 0.00044 36.9 9.0 110 250-380 54-168 (340)
105 3e05_A Precorrin-6Y C5,15-meth 71.7 28 0.00095 31.0 10.4 110 250-382 30-141 (204)
106 3cc8_A Putative methyltransfer 71.2 9 0.00031 34.2 7.0 104 249-381 22-128 (230)
107 2zfu_A Nucleomethylin, cerebra 70.7 7.6 0.00026 35.0 6.4 115 251-441 57-176 (215)
108 1ws6_A Methyltransferase; stru 69.1 9.8 0.00034 32.4 6.5 104 261-386 42-150 (171)
109 2pjd_A Ribosomal RNA small sub 69.0 4.4 0.00015 40.2 4.8 117 248-382 184-302 (343)
110 3njr_A Precorrin-6Y methylase; 68.2 37 0.0013 30.7 10.6 105 250-382 45-153 (204)
111 3mti_A RRNA methylase; SAM-dep 67.4 25 0.00084 30.7 8.9 43 262-313 24-66 (185)
112 3lbf_A Protein-L-isoaspartate 66.7 25 0.00084 31.3 8.9 106 250-382 67-173 (210)
113 2fpo_A Methylase YHHF; structu 65.2 15 0.0005 33.3 7.1 101 262-385 56-162 (202)
114 1ne2_A Hypothetical protein TA 63.8 14 0.00046 33.0 6.5 89 260-374 51-139 (200)
115 2jjq_A Uncharacterized RNA met 63.7 90 0.0031 32.1 13.6 95 262-382 292-386 (425)
116 2p8j_A S-adenosylmethionine-de 63.7 22 0.00074 31.4 7.9 101 261-382 24-127 (209)
117 3lpm_A Putative methyltransfer 62.2 45 0.0015 31.1 10.2 50 260-321 49-98 (259)
118 2ex4_A Adrenal gland protein A 62.0 18 0.00063 33.1 7.3 141 260-442 79-223 (241)
119 1dl5_A Protein-L-isoaspartate 61.6 38 0.0013 32.9 9.9 110 249-382 64-174 (317)
120 3fut_A Dimethyladenosine trans 61.6 30 0.001 33.6 9.0 99 234-352 16-119 (271)
121 3q87_B N6 adenine specific DNA 61.2 31 0.001 30.2 8.3 34 263-306 26-59 (170)
122 2qn6_B Translation initiation 60.2 11 0.00036 31.4 4.7 39 287-325 49-91 (93)
123 3m33_A Uncharacterized protein 59.7 26 0.00089 31.9 7.8 41 261-310 49-89 (226)
124 2i62_A Nicotinamide N-methyltr 58.6 18 0.00061 33.3 6.5 45 259-311 55-99 (265)
125 3ftd_A Dimethyladenosine trans 58.6 33 0.0011 32.6 8.6 50 250-307 21-70 (249)
126 3grz_A L11 mtase, ribosomal pr 58.5 19 0.00064 32.1 6.5 110 246-381 44-157 (205)
127 2nxc_A L11 mtase, ribosomal pr 58.3 25 0.00087 33.0 7.7 95 261-381 121-216 (254)
128 1dus_A MJ0882; hypothetical pr 58.1 18 0.00061 31.2 6.1 114 248-383 40-157 (194)
129 1uwv_A 23S rRNA (uracil-5-)-me 57.3 84 0.0029 32.1 12.0 108 253-382 279-388 (433)
130 4hc4_A Protein arginine N-meth 57.3 19 0.00066 36.8 7.1 100 263-380 86-186 (376)
131 3tqs_A Ribosomal RNA small sub 57.0 37 0.0013 32.5 8.7 53 251-312 20-72 (255)
132 2vdv_E TRNA (guanine-N(7)-)-me 57.0 50 0.0017 30.5 9.4 48 260-314 49-96 (246)
133 2avn_A Ubiquinone/menaquinone 56.4 38 0.0013 31.4 8.5 94 260-382 54-151 (260)
134 2gs9_A Hypothetical protein TT 56.3 24 0.00081 31.4 6.8 99 252-381 29-130 (211)
135 1xj5_A Spermidine synthase 1; 55.9 20 0.00068 35.9 6.8 113 261-385 121-237 (334)
136 1zq9_A Probable dimethyladenos 55.6 46 0.0016 32.0 9.2 53 250-311 18-70 (285)
137 2h1r_A Dimethyladenosine trans 54.7 53 0.0018 31.9 9.5 54 249-311 31-84 (299)
138 1l3i_A Precorrin-6Y methyltran 53.7 24 0.00082 30.3 6.2 54 250-312 23-76 (192)
139 3tma_A Methyltransferase; thum 52.8 39 0.0013 33.3 8.3 110 252-376 195-310 (354)
140 3mb5_A SAM-dependent methyltra 52.7 79 0.0027 28.9 10.0 57 251-313 84-140 (255)
141 2yxe_A Protein-L-isoaspartate 52.2 24 0.00082 31.5 6.1 57 251-313 68-124 (215)
142 3dxy_A TRNA (guanine-N(7)-)-me 52.0 33 0.0011 31.6 7.2 110 260-384 34-151 (218)
143 3ggd_A SAM-dependent methyltra 51.7 26 0.00088 32.0 6.4 103 262-383 58-164 (245)
144 1o9g_A RRNA methyltransferase; 51.6 22 0.00075 33.0 6.0 56 252-312 43-98 (250)
145 4dzr_A Protein-(glutamine-N5) 51.5 11 0.00037 33.3 3.6 55 251-312 20-75 (215)
146 1o54_A SAM-dependent O-methylt 50.7 75 0.0026 29.8 9.7 56 251-312 103-158 (277)
147 2a14_A Indolethylamine N-methy 50.3 31 0.001 32.4 6.8 47 258-312 53-99 (263)
148 3bwc_A Spermidine synthase; SA 50.2 34 0.0012 33.3 7.3 110 262-383 97-210 (304)
149 2ozv_A Hypothetical protein AT 50.0 39 0.0013 31.8 7.5 116 259-384 35-171 (260)
150 2gpy_A O-methyltransferase; st 48.8 39 0.0013 30.8 7.1 99 262-382 56-159 (233)
151 3g89_A Ribosomal RNA small sub 48.6 22 0.00076 33.6 5.5 101 260-381 80-182 (249)
152 3bxo_A N,N-dimethyltransferase 48.0 50 0.0017 29.6 7.7 98 259-382 39-140 (239)
153 1vbf_A 231AA long hypothetical 47.6 30 0.001 31.3 6.1 103 251-382 61-164 (231)
154 1jsx_A Glucose-inhibited divis 47.6 22 0.00075 31.5 5.0 97 262-383 67-165 (207)
155 3p2e_A 16S rRNA methylase; met 47.3 59 0.002 30.1 8.1 118 251-382 16-138 (225)
156 3tfw_A Putative O-methyltransf 47.0 30 0.001 32.3 6.1 102 261-382 64-169 (248)
157 3tm4_A TRNA (guanine N2-)-meth 46.3 88 0.003 31.3 9.8 107 259-381 216-329 (373)
158 2pxx_A Uncharacterized protein 45.5 33 0.0011 30.1 5.9 45 260-312 42-86 (215)
159 3adn_A Spermidine synthase; am 45.4 42 0.0014 32.7 7.1 111 261-384 84-199 (294)
160 3bzb_A Uncharacterized protein 43.1 1.4E+02 0.0049 28.2 10.5 42 262-311 81-123 (281)
161 1iy9_A Spermidine synthase; ro 42.5 62 0.0021 31.0 7.7 111 261-383 76-189 (275)
162 2esr_A Methyltransferase; stru 41.9 59 0.002 27.9 6.8 103 261-386 32-141 (177)
163 3id6_C Fibrillarin-like rRNA/T 41.5 1.5E+02 0.0053 27.8 10.2 58 250-317 63-123 (232)
164 2b25_A Hypothetical protein; s 40.8 44 0.0015 32.5 6.5 71 239-315 84-154 (336)
165 2ipx_A RRNA 2'-O-methyltransfe 39.6 99 0.0034 28.0 8.3 101 261-382 78-181 (233)
166 2pbf_A Protein-L-isoaspartate 38.6 52 0.0018 29.6 6.2 61 251-313 69-131 (227)
167 2fhp_A Methylase, putative; al 38.6 70 0.0024 27.4 6.8 106 261-386 45-157 (187)
168 1qam_A ERMC' methyltransferase 38.4 29 0.00099 32.6 4.5 53 250-311 20-72 (244)
169 1i1n_A Protein-L-isoaspartate 38.3 51 0.0018 29.6 6.1 57 251-313 66-124 (226)
170 3fpf_A Mtnas, putative unchara 37.9 1.7E+02 0.0059 28.9 10.2 98 260-382 122-221 (298)
171 1i9g_A Hypothetical protein RV 37.7 58 0.002 30.3 6.5 59 250-314 89-147 (280)
172 2pwy_A TRNA (adenine-N(1)-)-me 37.5 53 0.0018 30.0 6.1 57 251-313 87-143 (258)
173 3dr5_A Putative O-methyltransf 37.3 38 0.0013 31.3 5.1 105 256-382 52-162 (221)
174 2h00_A Methyltransferase 10 do 37.2 39 0.0013 31.2 5.2 55 260-325 65-121 (254)
175 2b3t_A Protein methyltransfera 36.2 50 0.0017 31.1 5.9 61 252-324 102-163 (276)
176 3dmg_A Probable ribosomal RNA 35.8 1.4E+02 0.0048 30.1 9.5 118 248-383 215-340 (381)
177 3gru_A Dimethyladenosine trans 35.6 1.8E+02 0.0061 28.4 9.9 66 238-312 23-93 (295)
178 1r18_A Protein-L-isoaspartate( 34.8 76 0.0026 28.7 6.7 63 251-314 73-137 (227)
179 3ckk_A TRNA (guanine-N(7)-)-me 34.7 41 0.0014 31.4 4.9 50 258-314 44-93 (235)
180 1yb2_A Hypothetical protein TA 33.2 45 0.0015 31.5 5.0 55 251-311 101-155 (275)
181 3tr6_A O-methyltransferase; ce 33.0 29 0.00098 31.2 3.4 54 262-325 66-121 (225)
182 1m6y_A S-adenosyl-methyltransf 32.8 31 0.0011 34.0 3.8 57 251-314 17-73 (301)
183 4hg2_A Methyltransferase type 31.8 99 0.0034 29.3 7.2 89 263-381 42-133 (257)
184 3uzu_A Ribosomal RNA small sub 31.7 89 0.0031 30.2 6.9 54 251-310 33-87 (279)
185 1pjz_A Thiopurine S-methyltran 31.7 60 0.0021 29.1 5.4 42 260-310 22-63 (203)
186 3a27_A TYW2, uncharacterized p 29.7 3.4E+02 0.012 25.5 10.6 95 263-381 122-217 (272)
187 2j66_A BTRK, decarboxylase; bu 28.9 3.4E+02 0.012 27.3 11.0 61 260-324 133-222 (428)
188 1xdz_A Methyltransferase GIDB; 28.2 79 0.0027 28.9 5.6 99 261-382 71-173 (240)
189 2yvl_A TRMI protein, hypotheti 28.0 3.2E+02 0.011 24.3 10.9 53 251-312 82-134 (248)
190 1yz7_A Probable translation in 27.8 78 0.0027 29.4 5.4 41 287-327 132-176 (188)
191 1lbq_A Ferrochelatase; rossman 27.6 3.4E+02 0.012 27.4 10.6 41 289-329 157-208 (362)
192 2kl8_A OR15; structural genomi 27.3 1.2E+02 0.0041 23.8 5.5 35 289-325 41-75 (85)
193 1jg1_A PIMT;, protein-L-isoasp 26.7 64 0.0022 29.4 4.7 107 250-383 81-189 (235)
194 1zx0_A Guanidinoacetate N-meth 26.6 56 0.0019 29.8 4.3 105 259-381 59-168 (236)
195 3duw_A OMT, O-methyltransferas 26.4 46 0.0016 29.9 3.6 103 261-383 59-167 (223)
196 2efj_A 3,7-dimethylxanthine me 25.0 4.5E+02 0.015 26.8 11.1 56 261-316 53-118 (384)
197 3gdh_A Trimethylguanosine synt 24.8 95 0.0032 28.1 5.5 53 260-325 78-132 (241)
198 3ntv_A MW1564 protein; rossman 24.4 50 0.0017 30.3 3.4 100 260-382 71-175 (232)
199 1ixk_A Methyltransferase; open 23.8 1.3E+02 0.0046 29.1 6.6 64 248-321 106-169 (315)
200 1nt2_A Fibrillarin-like PRE-rR 23.2 1.2E+02 0.0042 27.4 5.9 39 261-306 58-96 (210)
201 3ghf_A Septum site-determining 23.1 87 0.003 26.8 4.5 49 263-322 50-99 (120)
202 2gb4_A Thiopurine S-methyltran 23.0 1.1E+02 0.0037 28.9 5.6 39 260-307 68-106 (252)
203 1p91_A Ribosomal RNA large sub 22.8 75 0.0026 29.3 4.4 43 260-309 85-127 (269)
204 1sui_A Caffeoyl-COA O-methyltr 22.7 1.9E+02 0.0066 26.8 7.3 49 262-320 81-129 (247)
205 2o07_A Spermidine synthase; st 22.7 1.1E+02 0.0038 29.7 5.8 112 262-385 97-211 (304)
206 3opn_A Putative hemolysin; str 22.2 62 0.0021 30.2 3.7 60 237-305 14-74 (232)
207 1u2z_A Histone-lysine N-methyl 22.1 1.4E+02 0.0049 30.9 6.8 119 250-382 232-358 (433)
208 2fca_A TRNA (guanine-N(7)-)-me 22.1 1.1E+02 0.0039 27.5 5.4 108 260-383 38-153 (213)
209 1af7_A Chemotaxis receptor met 20.6 71 0.0024 30.9 3.8 51 260-310 105-156 (274)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.77 E-value=0.0044 Score=60.36 Aligned_cols=107 Identities=11% Similarity=0.153 Sum_probs=66.0
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
.-+|+|+|.|.|. +...|+.+. ++|..+||||+.+.+.++.+.+++.++- ...+++| +..+..++.
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s~~ml~~A~~~~~~~~--~~~~v~~--~~~D~~~~~----- 136 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNSPAMIERCRRHIDAYK--APTPVDV--IEGDIRDIA----- 136 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEE--EESCTTTCC-----
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECCHHHHHHHHHHHHhhc--cCceEEE--eeccccccc-----
Confidence 3479999999984 445566543 3466899999999888887777765432 1224444 334444433
Q ss_pred ccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEE-Eee
Q 045494 341 LRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTL-VEQ 383 (492)
Q Consensus 341 l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvl-vEq 383 (492)
..+-..+++++.+|.+.+ ..+..+|+.| |.|+|.-..+ .|.
T Consensus 137 ~~~~d~v~~~~~l~~~~~--~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 137 IENASMVVLNFTLQFLEP--SERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp CCSEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccccceeeeeeeecCc--hhHhHHHHHHHHHcCCCcEEEEEec
Confidence 223345666766665532 1245677765 7799987654 454
No 2
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.35 E-value=0.035 Score=50.22 Aligned_cols=110 Identities=14% Similarity=0.094 Sum_probs=66.1
Q ss_pred hHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEee
Q 045494 249 NQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHP 326 (492)
Q Consensus 249 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~ 326 (492)
...|++.+.-... +|+|+|.+.|. +...|+.+ |..++|||+.+...++.+.+++. ..|+. ++|.
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s~~~~~~a~~~~~----~~~~~~~~~~~- 98 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFSKHMNEIALKNIA----DANLNDRIQIV- 98 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESCHHHHHHHHHHHH----HTTCTTTEEEE-
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECCHHHHHHHHHHHH----hccccCceEEE-
Confidence 3556666665555 99999999985 44555555 45899999998877766655543 44553 4443
Q ss_pred ecccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEEe
Q 045494 327 IAKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLVE 382 (492)
Q Consensus 327 V~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~PkvvvlvE 382 (492)
..+..++. ..++ +.|+++..+|.+ . ....+|+. .+.|+|.-.+++.
T Consensus 99 -~~d~~~~~-----~~~~~~D~v~~~~~l~~~---~-~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 99 -QGDVHNIP-----IEDNYADLIVSRGSVFFW---E-DVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp -ECBTTBCS-----SCTTCEEEEEEESCGGGC---S-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred -EcCHHHCC-----CCcccccEEEECchHhhc---c-CHHHHHHHHHHhCCCCCEEEEE
Confidence 33333322 2222 345455445544 2 24456654 4778998776664
No 3
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=96.21 E-value=0.03 Score=56.57 Aligned_cols=162 Identities=17% Similarity=0.222 Sum_probs=90.3
Q ss_pred hHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeec
Q 045494 249 NQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIA 328 (492)
Q Consensus 249 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~ 328 (492)
.+.|++++.-...-+|+|+|-+.|. +..+|+.+. |.+|+|.++.+ +.++.+.+++. ....=..+|..
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp-~v~~~a~~~~~---~~~~~rv~~~~-- 234 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIP-EVVWTAKQHFS---FQEEEQIDFQE-- 234 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECH-HHHHHHHHHSC---C--CCSEEEEE--
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCH-HHHHHHHHhhh---hcccCceeeec--
Confidence 4677887765555689999999995 455566553 67899988864 34444433321 11111245533
Q ss_pred ccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcE-EEEEeecCCCCCCChHHHHHHHHHHHHHH
Q 045494 329 KKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRV-VTLVEQEISHGGDDPNRHRVEHCLLYREI 406 (492)
Q Consensus 329 ~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkv-vvlvEqea~hnsd~~eR~~iE~~~lgreI 406 (492)
.+..+ . .+...+++....++|...+. ....+|+.+ +.|+|.- ++++|.-.+.+...+.... ++ .+
T Consensus 235 gD~~~--~---~~~~~D~~~~~~vlh~~~d~--~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~----~~--dl 301 (353)
T 4a6d_A 235 GDFFK--D---PLPEADLYILARVLHDWADG--KCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQ----LY--SL 301 (353)
T ss_dssp SCTTT--S---CCCCCSEEEEESSGGGSCHH--HHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHH----HH--HH
T ss_pred Ccccc--C---CCCCceEEEeeeecccCCHH--HHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHH----HH--HH
Confidence 22211 1 12234556555566654331 124567766 6799975 5556754443333332211 11 12
Q ss_pred HHHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 407 NNILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 407 ~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
.=.+.+.|.+| +.++|++.+.+ |||+.+.+
T Consensus 302 ~ml~~~~g~er----t~~e~~~ll~~-AGf~~v~v 331 (353)
T 4a6d_A 302 NMLVQTEGQER----TPTHYHMLLSS-AGFRDFQF 331 (353)
T ss_dssp HHHHSSSCCCC----CHHHHHHHHHH-HTCEEEEE
T ss_pred HHHHhCCCcCC----CHHHHHHHHHH-CCCceEEE
Confidence 11234566555 45789999999 99998766
No 4
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.19 E-value=0.15 Score=48.23 Aligned_cols=172 Identities=13% Similarity=0.083 Sum_probs=88.1
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHH------HHHHHHHHHHHHHHHhCC--c
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSME------VLLETGKQLFNFAKRLGL--S 321 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~------~L~etg~rL~~fA~slgv--p 321 (492)
..|++.+.-.+.-+|+|+|.+.|.-- ..|+.+. .|..++|||+.+.. .++.+.+++. ..++ .
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~----~~l~~~~--g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~----~~~~~~~ 102 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLS----AVLADQV--GSSGHVTGIDIASPDYGAPLTLGQAWNHLL----AGPLGDR 102 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHH----HHHHHHH--CTTCEEEEECSSCTTCCSSSCHHHHHHHHH----TSTTGGG
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHH----HHHHHHh--CCCCEEEEEECCccccccHHHHHHHHHHHH----hcCCCCc
Confidence 35666665455568999999988533 3344332 24469999998764 5655555543 3344 2
Q ss_pred eEEeeecccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHHHhcCC--cEEEEEeecCCCCCCChHHHHH
Q 045494 322 FEFHPIAKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLLEELSP--RVVTLVEQEISHGGDDPNRHRV 397 (492)
Q Consensus 322 FeF~~V~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~P--kvvvlvEqea~hnsd~~eR~~i 397 (492)
.+|.. .+ ++....+...++ +.|+++..+|.+.+ .+.+++.++.|.| ..+++++.....+....-...+
T Consensus 103 v~~~~--~d--~~~~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~ 174 (275)
T 3bkx_A 103 LTVHF--NT--NLSDDLGPIADQHFDRVVLAHSLWYFAS----ANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQ 174 (275)
T ss_dssp EEEEC--SC--CTTTCCGGGTTCCCSEEEEESCGGGSSC----HHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHH
T ss_pred eEEEE--CC--hhhhccCCCCCCCEEEEEEccchhhCCC----HHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHH
Confidence 44432 22 111111222222 45555544554322 2458889999888 4666666655433221111111
Q ss_pred HHHHHHHHHHHHHhhcCCCcc-cccchhhHHHHHhccCCCeeccCC
Q 045494 398 EHCLLYREINNILAIGGPARS-GEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 398 E~~~lgreI~NiVAcEG~~R~-rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
. .+.+.........+.... +.-+...|+..+.+ +||+.+...
T Consensus 175 ~--~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~-aGf~~~~~~ 217 (275)
T 3bkx_A 175 A--AMIQGLLYAIAPSDVANIRTLITPDTLAQIAHD-NTWTYTAGT 217 (275)
T ss_dssp H--HHHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHH-HTCEEEECC
T ss_pred H--HHHHHHHhhccccccccccccCCHHHHHHHHHH-CCCeeEEEE
Confidence 1 111222111111111112 22456788888888 999976553
No 5
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=95.86 E-value=0.095 Score=51.37 Aligned_cols=161 Identities=16% Similarity=0.192 Sum_probs=88.8
Q ss_pred HHHHhhhcc--CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEe
Q 045494 250 QAILEAFHR--RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFH 325 (492)
Q Consensus 250 qAILEA~~g--~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~ 325 (492)
..|++.+.. .+..+|+|+|.+.|. +...|+.+. |..++|+++.+ ..++.+.+++.+ .|++ ++|.
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-~~~~~a~~~~~~----~~~~~~v~~~ 220 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-SVLEVAKENARI----QGVASRYHTI 220 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-HHHHHHHHHHHH----HTCGGGEEEE
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-HHHHHHHHHHHh----cCCCcceEEE
Confidence 467777765 667899999999995 444455443 45799999988 777776666543 3553 5554
Q ss_pred eecccccccccccccccCC-CeEEEeeccccccCCCCccHHHHHHH-HhcCCcE-EEEEeecCCCCCCChHHHHHHHHHH
Q 045494 326 PIAKKFGDIDASMLQLRRG-ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRV-VTLVEQEISHGGDDPNRHRVEHCLL 402 (492)
Q Consensus 326 ~V~~~~eel~~~~l~l~~g-EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkv-vvlvEqea~hnsd~~eR~~iE~~~l 402 (492)
. .+..+.. +..+ +.+.++..+|.+.+ .....+|+.+ +.|+|.- ++++|.........+.-. .++
T Consensus 221 ~--~d~~~~~-----~~~~~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~----~~~ 287 (335)
T 2r3s_A 221 A--GSAFEVD-----YGNDYDLVLLPNFLHHFDV--ATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDA----AAF 287 (335)
T ss_dssp E--SCTTTSC-----CCSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHH----HHH
T ss_pred e--cccccCC-----CCCCCcEEEEcchhccCCH--HHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHH----HHH
Confidence 3 2232211 1112 34444444554321 1234566655 6689987 556665544322222111 111
Q ss_pred HHHHHHHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 403 YREINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 403 greI~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
... ...+.+..+.+ +.+.|+..+.. +||+.+..
T Consensus 288 ~~~---~~~~~~~~~~~--t~~~~~~ll~~-aGf~~~~~ 320 (335)
T 2r3s_A 288 SLV---MLATTPNGDAY--TFAEYESMFSN-AGFSHSQL 320 (335)
T ss_dssp HHH---HHHHSSSCCCC--CHHHHHHHHHH-TTCSEEEE
T ss_pred HHH---HHeeCCCCCcC--CHHHHHHHHHH-CCCCeeeE
Confidence 111 11221111222 45789999999 99997765
No 6
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.74 E-value=0.22 Score=45.34 Aligned_cols=147 Identities=15% Similarity=0.156 Sum_probs=85.3
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeec
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIA 328 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~ 328 (492)
+.|++.+.-.+.-.|+|+|.+.|.--..|.+.. +|..++|||+.+...++.+.+++. ..+++ ++|. .
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~~--~ 94 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQEEMVNYAWEKVN----KLGLKNVEVL--K 94 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESCHHHHHHHHHHHH----HHTCTTEEEE--E
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECCHHHHHHHHHHHH----HcCCCcEEEE--e
Confidence 567777765566689999999986444444432 355699999998887776665553 34554 4443 3
Q ss_pred ccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEE-eecCCCCCCChHHHHHHHHHHHH
Q 045494 329 KKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLV-EQEISHGGDDPNRHRVEHCLLYR 404 (492)
Q Consensus 329 ~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~Pkvvvlv-Eqea~hnsd~~eR~~iE~~~lgr 404 (492)
.+..++. ..++ +.|+.+..+|.+. + ...+|+. .+.|+|.-.+++ +......
T Consensus 95 ~d~~~~~-----~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~---------------- 149 (219)
T 3dh0_A 95 SEENKIP-----LPDNTVDFIFMAFTFHELS---E-PLKFLEELKRVAKPFAYLAIIDWKKEER---------------- 149 (219)
T ss_dssp CBTTBCS-----SCSSCEEEEEEESCGGGCS---S-HHHHHHHHHHHEEEEEEEEEEEECSSCC----------------
T ss_pred cccccCC-----CCCCCeeEEEeehhhhhcC---C-HHHHHHHHHHHhCCCeEEEEEEeccccc----------------
Confidence 3333322 2222 3344454455442 2 3455554 477999866655 3322211
Q ss_pred HHHHHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 405 EINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 405 eI~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
..+....+.-+.+.|+..+.. +||+.+..
T Consensus 150 -------~~~~~~~~~~~~~~~~~~l~~-~Gf~~~~~ 178 (219)
T 3dh0_A 150 -------DKGPPPEEVYSEWEVGLILED-AGIRVGRV 178 (219)
T ss_dssp -------SSSCCGGGSCCHHHHHHHHHH-TTCEEEEE
T ss_pred -------ccCCchhcccCHHHHHHHHHH-CCCEEEEE
Confidence 011111222356789999999 99997765
No 7
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.61 E-value=0.17 Score=51.05 Aligned_cols=167 Identities=10% Similarity=0.012 Sum_probs=88.3
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC--ceEEeeec
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL--SFEFHPIA 328 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv--pFeF~~V~ 328 (492)
.+++.+.....-+|+|+|.+.|. +...|+.+. |.+++|+++. ...++.+.+++ +..|+ .++|..
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~----~~~~~~~~v~~~~-- 235 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDL-PQQLEMMRKQT----AGLSGSERIHGHG-- 235 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEEC-HHHHHHHHHHH----TTCTTGGGEEEEE--
T ss_pred HHHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeC-HHHHHHHHHHH----HhcCcccceEEEE--
Confidence 44555444556799999999996 344444442 4579999997 55555554443 34455 355533
Q ss_pred ccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEE-EEeecCCCCCCChHHHHHHHHHHHHHH
Q 045494 329 KKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVT-LVEQEISHGGDDPNRHRVEHCLLYREI 406 (492)
Q Consensus 329 ~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvv-lvEqea~hnsd~~eR~~iE~~~lgreI 406 (492)
.+..+.+. .+. ..-+++.++..+|.+.+. ....+|+.+ +.|+|.-.+ ++|.-.+... ......+.......+
T Consensus 236 ~d~~~~~~-~~p-~~~D~v~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~--~~~~~~~~~~~~~~~ 309 (363)
T 3dp7_A 236 ANLLDRDV-PFP-TGFDAVWMSQFLDCFSEE--EVISILTRVAQSIGKDSKVYIMETLWDRQR--YETASYCLTQISLYF 309 (363)
T ss_dssp CCCCSSSC-CCC-CCCSEEEEESCSTTSCHH--HHHHHHHHHHHHCCTTCEEEEEECCTTSCS--SHHHHHHHHHHHHHH
T ss_pred ccccccCC-CCC-CCcCEEEEechhhhCCHH--HHHHHHHHHHHhcCCCcEEEEEeeccCCcc--ccchhhHHHHhhhhH
Confidence 22222110 011 123456666566654321 234567766 668997655 5564443321 122111111111111
Q ss_pred HHHHhhcCCCcccccchhhHHHHHhccCCCeeccCC
Q 045494 407 NNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 407 ~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
. +...+..|++ +.+.|+..|.. |||+.+.+.
T Consensus 310 -~-~~~~~~~~~~--t~~e~~~ll~~-AGf~~v~~~ 340 (363)
T 3dp7_A 310 -T-AMANGNSKMF--HSDDLIRCIEN-AGLEVEEIQ 340 (363)
T ss_dssp -H-HSSCSSCCSC--CHHHHHHHHHT-TTEEESCCC
T ss_pred -H-hhhCCCCccc--CHHHHHHHHHH-cCCeEEEEE
Confidence 1 1122323333 45799999999 999998875
No 8
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.59 E-value=0.25 Score=46.45 Aligned_cols=155 Identities=10% Similarity=0.125 Sum_probs=82.9
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeec
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIA 328 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~ 328 (492)
..|++.+.-...-+|+|+|.+.|. +...|+.+. + ++|||+.+.+.++.+.+++ +..|++ ++|. .
T Consensus 27 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s~~~l~~a~~~~----~~~~~~~v~~~--~ 91 (260)
T 1vl5_A 27 AKLMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLTEDILKVARAFI----EGNGHQQVEYV--Q 91 (260)
T ss_dssp HHHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESCHHHHHHHHHHH----HHTTCCSEEEE--E
T ss_pred HHHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCCHHHHHHHHHHH----HhcCCCceEEE--E
Confidence 345555554556689999999886 455666653 2 9999999887776665544 344554 4443 2
Q ss_pred ccccccccccccccCC--CeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEE-eecCCCCCCChHHHHHHHHHHHH
Q 045494 329 KKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLV-EQEISHGGDDPNRHRVEHCLLYR 404 (492)
Q Consensus 329 ~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~Pkvvvlv-Eqea~hnsd~~eR~~iE~~~lgr 404 (492)
.+.+++. ..++ +.|+.+..+|.+.+ ...+|+ ..+-|+|.-.+++ +..... .+.... + -.
T Consensus 92 ~d~~~l~-----~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~~~~~~~~~---~~~~~~----~-~~ 154 (260)
T 1vl5_A 92 GDAEQMP-----FTDERFHIVTCRIAAHHFPN----PASFVSEAYRVLKKGGQLLLVDNSAPE---NDAFDV----F-YN 154 (260)
T ss_dssp CCC-CCC-----SCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEEEBCS---SHHHHH----H-HH
T ss_pred ecHHhCC-----CCCCCEEEEEEhhhhHhcCC----HHHHHHHHHHHcCCCCEEEEEEcCCCC---CHHHHH----H-HH
Confidence 3333322 2222 34555545555432 345554 5578999876655 432221 121111 1 11
Q ss_pred HHHHHHhhcCCCcccccchhhHHHHHhccCCCeecc
Q 045494 405 EINNILAIGGPARSGEDKFKHWRSELARCNGFAQVP 440 (492)
Q Consensus 405 eI~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~ 440 (492)
.+.. +. +....+.-+...|...|.+ +||+.+.
T Consensus 155 ~~~~-~~--~~~~~~~~~~~~~~~~l~~-aGf~~~~ 186 (260)
T 1vl5_A 155 YVEK-ER--DYSHHRAWKKSDWLKMLEE-AGFELEE 186 (260)
T ss_dssp HHHH-HH--CTTCCCCCBHHHHHHHHHH-HTCEEEE
T ss_pred HHHH-hc--CccccCCCCHHHHHHHHHH-CCCeEEE
Confidence 1111 11 1111233455778888888 8887543
No 9
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.39 E-value=0.014 Score=54.15 Aligned_cols=166 Identities=13% Similarity=0.086 Sum_probs=85.3
Q ss_pred HHHHhhhc-cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeec
Q 045494 250 QAILEAFH-RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIA 328 (492)
Q Consensus 250 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~ 328 (492)
+.+++.+. ..+.-.|+|+|.+.|.- ...|+.+. |..++|||+.+...++.+.+++.. .+ .++| +.
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~--~~ 98 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLL----SAFLMEKY---PEATFTLVDMSEKMLEIAKNRFRG----NL-KVKY--IE 98 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHH----HHHHHHHC---TTCEEEEEESCHHHHHHHHHHTCS----CT-TEEE--EE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHH----HHHHHHhC---CCCeEEEEECCHHHHHHHHHhhcc----CC-CEEE--Ee
Confidence 56666665 44568999999999853 33344432 457999999988777665554422 22 3333 33
Q ss_pred ccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE-eecCCCCCCChHHHHHHHHHH----
Q 045494 329 KKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV-EQEISHGGDDPNRHRVEHCLL---- 402 (492)
Q Consensus 329 ~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv-Eqea~hnsd~~eR~~iE~~~l---- 402 (492)
.+..++... ..=++|.++..+|.+.+ .....+|+.+ +.|+|.-.+++ +...... ...+..... .+
T Consensus 99 ~d~~~~~~~----~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~~~-~~~~~~ 169 (234)
T 3dtn_A 99 ADYSKYDFE----EKYDMVVSALSIHHLED--EDKKELYKRSYSILKESGIFINADLVHGET--AFIENLNKT-IWRQYV 169 (234)
T ss_dssp SCTTTCCCC----SCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEECBCSS--HHHHHHHHH-HHHHHH
T ss_pred CchhccCCC----CCceEEEEeCccccCCH--HHHHHHHHHHHHhcCCCcEEEEEEecCCCC--hhhhhHHHH-HHHHHH
Confidence 344443221 11134445555555422 1123466555 67899876654 4332211 111111111 11
Q ss_pred ------HHHHHHHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 403 ------YREINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 403 ------greI~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
..++.+.....+ ..+.-+.+.|+..|.. |||+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~-aGF~~v~~ 211 (234)
T 3dtn_A 170 ENSGLTEEEIAAGYERSK--LDKDIEMNQQLNWLKE-AGFRDVSC 211 (234)
T ss_dssp HTSSCCHHHHHTTC------CCCCCBHHHHHHHHHH-TTCEEEEE
T ss_pred HhcCCCHHHHHHHHHhcc--cccccCHHHHHHHHHH-cCCCceee
Confidence 111211111111 1223466889999999 99998765
No 10
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=95.24 E-value=0.14 Score=49.56 Aligned_cols=161 Identities=9% Similarity=0.043 Sum_probs=82.0
Q ss_pred CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccc-
Q 045494 259 RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDAS- 337 (492)
Q Consensus 259 ~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~- 337 (492)
....+|+|+|.|.|.--..++..|+.+..+ ..+.+|||+++.+.++.+.+++.+...--++.|+|.. .+.+++...
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~ 127 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHK--ETSSEYQSRM 127 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEEC--SCHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEe--cchhhhhhhh
Confidence 456799999999995444567777655311 1234599999988887766654321110134455533 222222100
Q ss_pred cccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE-eecCCCCCCChHHHHHHHHHHHHHHHHHHhhc
Q 045494 338 MLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV-EQEISHGGDDPNRHRVEHCLLYREINNILAIG 413 (492)
Q Consensus 338 ~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv-Eqea~hnsd~~eR~~iE~~~lgreI~NiVAcE 413 (492)
.....++ +.|.++..+|.+.+ .+.+|+.+ |-|+|.-.+++ +... ++..... -.++...+
T Consensus 128 ~~~~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~~~~~----~~~~~~~------~~~~~~~~--- 190 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLYYVKD----IPATLKFFHSLLGTNAKMLIIVVSG----SSGWDKL------WKKYGSRF--- 190 (292)
T ss_dssp HTTTCCCCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEEEECT----TSHHHHH------HHHHGGGS---
T ss_pred ccccCCCceeEEEEeeeeeecCC----HHHHHHHHHHHcCCCcEEEEEEecC----CccHHHH------HHHHHHhc---
Confidence 0001112 23444545665533 45566665 56799966554 3221 1111111 11222211
Q ss_pred CCCc-ccccchhhHHHHHhccCCCeecc
Q 045494 414 GPAR-SGEDKFKHWRSELARCNGFAQVP 440 (492)
Q Consensus 414 G~~R-~rhE~~~~Wr~rm~~~AGF~~v~ 440 (492)
+... .+.-+...|...|.. +||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~l~~-aGf~~~~ 217 (292)
T 2aot_A 191 PQDDLCQYITSDDLTQMLDN-LGLKYEC 217 (292)
T ss_dssp CCCTTCCCCCHHHHHHHHHH-HTCCEEE
T ss_pred cCCCcccCCCHHHHHHHHHH-CCCceEE
Confidence 1111 233455788888888 9997554
No 11
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=95.24 E-value=0.15 Score=50.92 Aligned_cols=160 Identities=19% Similarity=0.231 Sum_probs=85.5
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeee
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPI 327 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V 327 (492)
..|++.+.-.+...|+|+|.+.| .+...|+.+. |.+++|+++. ...++.+.+++. ..|++ ++|..
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~~~~- 238 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---PHLRGTLVEL-AGPAERARRRFA----DAGLADRVTVAE- 238 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHH----HTTCTTTEEEEE-
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---CCCEEEEEeC-HHHHHHHHHHHH----hcCCCCceEEEe-
Confidence 56777765556679999999999 4445555443 4689999998 666666655543 34553 55543
Q ss_pred cccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcE-EEEEee--cCCCCCCChHHHHHHHHHHH
Q 045494 328 AKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRV-VTLVEQ--EISHGGDDPNRHRVEHCLLY 403 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkv-vvlvEq--ea~hnsd~~eR~~iE~~~lg 403 (492)
.+..+ .+.- .-+.+.++..+|.+.+. ....+|+.+ +.|+|.- ++++|. -...+. ... ... ++.
T Consensus 239 -~d~~~----~~~~-~~D~v~~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~-~~~---~~~-~~~ 305 (374)
T 1qzz_A 239 -GDFFK----PLPV-TADVVLLSFVLLNWSDE--DALTILRGCVRALEPGGRLLVLDRADVEGDGA-DRF---FST-LLD 305 (374)
T ss_dssp -CCTTS----CCSC-CEEEEEEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEECCH--------HH---HHH-HHH
T ss_pred -CCCCC----cCCC-CCCEEEEeccccCCCHH--HHHHHHHHHHHhcCCCcEEEEEechhhcCCCC-Ccc---hhh-hcc
Confidence 22222 0110 01344455455543221 123566655 6789987 455565 222111 111 111 111
Q ss_pred HHHHHHHhhcCCCcccccchhhHHHHHhccCCCeeccCC
Q 045494 404 REINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 404 reI~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
.. -.+...|..| +.+.|+..|.. +||+.+...
T Consensus 306 ~~--~~~~~~~~~~----~~~~~~~ll~~-aGf~~~~~~ 337 (374)
T 1qzz_A 306 LR--MLTFMGGRVR----TRDEVVDLAGS-AGLALASER 337 (374)
T ss_dssp HH--HHHHHSCCCC----CHHHHHHHHHT-TTEEEEEEE
T ss_pred hH--HHHhCCCcCC----CHHHHHHHHHH-CCCceEEEE
Confidence 11 1122334333 45789999999 999987763
No 12
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=95.13 E-value=0.17 Score=50.53 Aligned_cols=162 Identities=13% Similarity=0.089 Sum_probs=91.1
Q ss_pred hhHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEe
Q 045494 248 SNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFH 325 (492)
Q Consensus 248 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~ 325 (492)
....|++.+.-.+.-.|+|+|.+.|.-- ..|+.+. |.+++|+++. ...++.+.+++. ..|++ ++|.
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~----~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~~~ 245 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDIS----AAMLKHF---PELDSTILNL-PGAIDLVNENAA----EKGVADRMRGI 245 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHH----HHHHHHC---TTCEEEEEEC-GGGHHHHHHHHH----HTTCTTTEEEE
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHH----HHHHHHC---CCCeEEEEec-HHHHHHHHHHHH----hcCCCCCEEEE
Confidence 3467788876566779999999999743 3444332 4579999998 666666655544 34543 5553
Q ss_pred eecccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEE-EEeecCCCCCCChHHHHHHHHHHH
Q 045494 326 PIAKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVT-LVEQEISHGGDDPNRHRVEHCLLY 403 (492)
Q Consensus 326 ~V~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvv-lvEqea~hnsd~~eR~~iE~~~lg 403 (492)
. .+..+. .+..++.+.++..+|.+.+ .....+|+.+ +.|+|.-.+ ++|...... ..+. ... ++
T Consensus 246 ~--~d~~~~-----~~~~~D~v~~~~vlh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~---~~~-~~- 310 (359)
T 1x19_A 246 A--VDIYKE-----SYPEADAVLFCRILYSANE--QLSTIMCKKAFDAMRSGGRLLILDMVIDDP-ENPN---FDY-LS- 310 (359)
T ss_dssp E--CCTTTS-----CCCCCSEEEEESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEECCCCT-TSCC---HHH-HH-
T ss_pred e--CccccC-----CCCCCCEEEEechhccCCH--HHHHHHHHHHHHhcCCCCEEEEEecccCCC-CCch---HHH-HH-
Confidence 3 233222 1223456666666665422 1235567655 667887555 566543322 1111 111 22
Q ss_pred HHHHHHHh-hc-CCCcccccchhhHHHHHhccCCCeeccC
Q 045494 404 REINNILA-IG-GPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 404 reI~NiVA-cE-G~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
+.+. .. |.+-.+.-+.+.|++.|.. |||+.+..
T Consensus 311 ----~~~~~~~~g~~~~~~~t~~e~~~ll~~-aGf~~v~~ 345 (359)
T 1x19_A 311 ----HYILGAGMPFSVLGFKEQARYKEILES-LGYKDVTM 345 (359)
T ss_dssp ----HHGGGGGSSCCCCCCCCGGGHHHHHHH-HTCEEEEE
T ss_pred ----HHHHhcCCCCcccCCCCHHHHHHHHHH-CCCceEEE
Confidence 2222 22 3220111356789999999 99997765
No 13
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=94.98 E-value=0.21 Score=50.33 Aligned_cols=159 Identities=17% Similarity=0.210 Sum_probs=88.8
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC--ceEEeee
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL--SFEFHPI 327 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv--pFeF~~V 327 (492)
..|++.+.-.+...|+|+|.+.|. +...|+.+. |.+++|+++. ...++.+.+++. ..|+ ..+|..-
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~----~~~l~~~v~~~~~ 259 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF---PGLRGTLLER-PPVAEEARELLT----GRGLADRCEILPG 259 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHH----HTTCTTTEEEEEC
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC---CCCeEEEEcC-HHHHHHHHHhhh----hcCcCCceEEecc
Confidence 467777665667899999999996 444455442 5689999998 666666655543 3444 3555432
Q ss_pred cccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEE-EEeecCCCCCCChHHHHHHHHHHHHH
Q 045494 328 AKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVT-LVEQEISHGGDDPNRHRVEHCLLYRE 405 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvv-lvEqea~hnsd~~eR~~iE~~~lgre 405 (492)
+..+ .+.. .-+++.++..+|...+. ....+|+.+ +.|+|.-.+ ++|.-.+.. ..+. . .++.
T Consensus 260 --d~~~----~~p~-~~D~v~~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~l~i~e~~~~~~-~~~~-~----~~~d-- 322 (369)
T 3gwz_A 260 --DFFE----TIPD-GADVYLIKHVLHDWDDD--DVVRILRRIATAMKPDSRLLVIDNLIDER-PAAS-T----LFVD-- 322 (369)
T ss_dssp --CTTT----CCCS-SCSEEEEESCGGGSCHH--HHHHHHHHHHTTCCTTCEEEEEEEBCCSS-CCHH-H----HHHH--
T ss_pred --CCCC----CCCC-CceEEEhhhhhccCCHH--HHHHHHHHHHHHcCCCCEEEEEEeccCCC-CCCc-h----hHhh--
Confidence 2211 1111 22455555455554221 123577766 568886554 445443322 1221 1 1111
Q ss_pred HHHHHhhcCCCcccccchhhHHHHHhccCCCeeccCC
Q 045494 406 INNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 406 I~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
+.-.+...|.+| +.+.|+..|.. |||+.+.+.
T Consensus 323 ~~~~~~~~g~~~----t~~e~~~ll~~-aGf~~~~~~ 354 (369)
T 3gwz_A 323 LLLLVLVGGAER----SESEFAALLEK-SGLRVERSL 354 (369)
T ss_dssp HHHHHHHSCCCB----CHHHHHHHHHT-TTEEEEEEE
T ss_pred HHHHhhcCCccC----CHHHHHHHHHH-CCCeEEEEE
Confidence 111223455444 44789999999 999987663
No 14
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=94.71 E-value=0.089 Score=48.25 Aligned_cols=116 Identities=22% Similarity=0.239 Sum_probs=66.4
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc------eEE
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS------FEF 324 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp------FeF 324 (492)
.|++.+...+.-.|+|+|.+.|. +...|+.+. |..++|||+.+...++.+.+++ +..+++ ++|
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~~~~~v~~ 88 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVSYRSLEIAQERL----DRLRLPRNQWERLQL 88 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESCHHHHHHHHHHH----TTCCCCHHHHTTEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECCHHHHHHHHHHH----HHhcCCcccCcceEE
Confidence 44455554455689999999986 455566552 3469999999887777666554 233332 444
Q ss_pred eeecccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEeec
Q 045494 325 HPIAKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVEQE 384 (492)
Q Consensus 325 ~~V~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvEqe 384 (492)
. ..+...+.. ....=+.|+++..+|.+.+ .....+|+.+ +-|+|..++++...
T Consensus 89 ~--~~d~~~~~~---~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 89 I--QGALTYQDK---RFHGYDAATVIEVIEHLDL--SRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp E--ECCTTSCCG---GGCSCSEEEEESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred E--eCCcccccc---cCCCcCEEeeHHHHHcCCH--HHHHHHHHHHHHHcCCCEEEEEccC
Confidence 3 222322211 1112245555555554421 1235677655 66899987777654
No 15
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.52 E-value=0.16 Score=50.14 Aligned_cols=154 Identities=18% Similarity=0.173 Sum_probs=84.0
Q ss_pred HHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC--ceEEeeecc
Q 045494 252 ILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL--SFEFHPIAK 329 (492)
Q Consensus 252 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv--pFeF~~V~~ 329 (492)
|++.+.-.+..+|+|+|.+.| .+...|+.+. |.+++|+++. ...++.+.+++. ..++ ..+|..-
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~~~~~-- 226 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDL-QGPASAAHRRFL----DTGLSGRAQVVVG-- 226 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHH----HTTCTTTEEEEEC--
T ss_pred HHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecC-HHHHHHHHHhhh----hcCcCcCeEEecC--
Confidence 444444345679999999999 4444555543 4579999987 666666655543 3454 2566432
Q ss_pred cccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEE-EEeecCCCCCCChHHHHHHHHHHHHHHH
Q 045494 330 KFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVT-LVEQEISHGGDDPNRHRVEHCLLYREIN 407 (492)
Q Consensus 330 ~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvv-lvEqea~hnsd~~eR~~iE~~~lgreI~ 407 (492)
+..+ .+.. .-+++.++..+|.+.+. ....+|+.+ +.|+|.-.+ ++|.-.+.. .+. ..+. +.
T Consensus 227 d~~~----~~p~-~~D~v~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~~-~~~d-------~~ 289 (332)
T 3i53_A 227 SFFD----PLPA-GAGGYVLSAVLHDWDDL--SAVAILRRCAEAAGSGGVVLVIEAVAGDE--HAG-TGMD-------LR 289 (332)
T ss_dssp CTTS----CCCC-SCSEEEEESCGGGSCHH--HHHHHHHHHHHHHTTTCEEEEEECCCC-----CC-HHHH-------HH
T ss_pred CCCC----CCCC-CCcEEEEehhhccCCHH--HHHHHHHHHHHhcCCCCEEEEEeecCCCC--Ccc-HHHH-------HH
Confidence 2211 1111 23455555555554221 135677665 678997555 445433322 111 1111 11
Q ss_pred HHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 408 NILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 408 NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
-.....|..| +.+.|+..+.. |||+.+..
T Consensus 290 ~~~~~~~~~~----t~~e~~~ll~~-aGf~~~~~ 318 (332)
T 3i53_A 290 MLTYFGGKER----SLAELGELAAQ-AGLAVRAA 318 (332)
T ss_dssp HHHHHSCCCC----CHHHHHHHHHH-TTEEEEEE
T ss_pred HHhhCCCCCC----CHHHHHHHHHH-CCCEEEEE
Confidence 1223445444 45789999999 99998765
No 16
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=94.51 E-value=0.16 Score=46.33 Aligned_cols=111 Identities=15% Similarity=0.163 Sum_probs=62.9
Q ss_pred hhHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeee
Q 045494 248 SNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPI 327 (492)
Q Consensus 248 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V 327 (492)
.-..+++.+...+.-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++. -++ +| +
T Consensus 33 ~~~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~~~~~~a~~~~~-----~~~--~~--~ 94 (220)
T 3hnr_A 33 HYEDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA--G---RTVYGIEPSREMRMIAKEKLP-----KEF--SI--T 94 (220)
T ss_dssp THHHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT--T---CEEEEECSCHHHHHHHHHHSC-----TTC--CE--E
T ss_pred HHHHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC--C---CeEEEEeCCHHHHHHHHHhCC-----Cce--EE--E
Confidence 33567777766677799999999985 45556655 2 489999998776665544432 122 23 2
Q ss_pred cccccccccccccccCCCeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEEe
Q 045494 328 AKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLVE 382 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~PkvvvlvE 382 (492)
..+..++.. . ..=+.|+++..+|.+.+. ....+|+. .+.|+|.-.+++.
T Consensus 95 ~~d~~~~~~---~-~~fD~v~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 95 EGDFLSFEV---P-TSIDTIVSTYAFHHLTDD--EKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp SCCSSSCCC---C-SCCSEEEEESCGGGSCHH--HHHHHHHHHHHHSCTTCEEEEE
T ss_pred eCChhhcCC---C-CCeEEEEECcchhcCChH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 223333221 1 222455555555544221 11225554 4778998655543
No 17
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=94.33 E-value=0.77 Score=43.77 Aligned_cols=111 Identities=9% Similarity=0.002 Sum_probs=60.7
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccc
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKK 330 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~ 330 (492)
.|++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++ +..|+.-....+..+
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~s~~~~~~a~~~~----~~~~~~~~~~~~~~d 122 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTLSKNQANHVQQLV----ANSENLRSKRVLLAG 122 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESCHHHHHHHHHHH----HTCCCCSCEEEEESC
T ss_pred HHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEECCHHHHHHHHHHH----HhcCCCCCeEEEECC
Confidence 45555554555689999998775 4444553332 29999999887776655544 334543222223333
Q ss_pred ccccccccccccCCCeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEE
Q 045494 331 FGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLV 381 (492)
Q Consensus 331 ~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~Pkvvvlv 381 (492)
..++. ..=+.|+.+..+|.+.. .....+|+. .+-|+|.-.+++
T Consensus 123 ~~~~~------~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 123 WEQFD------EPVDRIVSIGAFEHFGH--ERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp GGGCC------CCCSEEEEESCGGGTCT--TTHHHHHHHHHHHSCTTCEEEE
T ss_pred hhhCC------CCeeEEEEeCchhhcCh--HHHHHHHHHHHHhcCCCCEEEE
Confidence 33332 11234444444444322 224556655 467899865544
No 18
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=94.32 E-value=0.7 Score=43.65 Aligned_cols=124 Identities=13% Similarity=0.011 Sum_probs=70.3
Q ss_pred HHhcCCccchhhhhhhHHHHhhhc-cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 234 FNNVSPFIKFAHFTSNQAILEAFH-RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 234 f~e~sP~~kfa~ftANqAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
+|+..+...-.+......+++.+. -.+.-+|+|+|.|.|. +...|+.+ |..++|||+.+...++.+.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~----~~~~la~~----~~~~v~gvD~s~~~~~~a~~~~- 89 (267)
T 3kkz_A 19 FFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTGG----QTMVLAGH----VTGQVTGLDFLSGFIDIFNRNA- 89 (267)
T ss_dssp HHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCH----HHHHHHTT----CSSEEEEEESCHHHHHHHHHHH-
T ss_pred HHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCH----HHHHHHhc----cCCEEEEEeCCHHHHHHHHHHH-
Confidence 333344333333334444555555 2345689999998874 55566666 3469999999887776655543
Q ss_pred HHHHHhCCc--eEEeeecccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE
Q 045494 313 NFAKRLGLS--FEFHPIAKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 313 ~fA~slgvp--FeF~~V~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
+..|++ .+|. ..+.+++. ..++ +.|+++..+|.+ + ...+|+.+ +-|+|.-.+++
T Consensus 90 ---~~~~~~~~v~~~--~~d~~~~~-----~~~~~fD~i~~~~~~~~~-~----~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 90 ---RQSGLQNRVTGI--VGSMDDLP-----FRNEELDLIWSEGAIYNI-G----FERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp ---HHTTCTTTEEEE--ECCTTSCC-----CCTTCEEEEEESSCGGGT-C----HHHHHHHHGGGEEEEEEEEE
T ss_pred ---HHcCCCcCcEEE--EcChhhCC-----CCCCCEEEEEEcCCceec-C----HHHHHHHHHHHcCCCCEEEE
Confidence 455664 5553 33333332 2222 234444445544 2 35566555 77899866655
No 19
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=94.31 E-value=0.22 Score=50.36 Aligned_cols=157 Identities=17% Similarity=0.251 Sum_probs=83.4
Q ss_pred HHHHhhhc-cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeec
Q 045494 250 QAILEAFH-RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIA 328 (492)
Q Consensus 250 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~ 328 (492)
..|++.+. -...-+|+|+|.+.|.- ...|+.+. |.+++|+++. ...++. |+.. -..+|..
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~-~~~~~~--------a~~~-~~v~~~~-- 252 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAV----ASMIVAKY---PSINAINFDL-PHVIQD--------APAF-SGVEHLG-- 252 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEEC-HHHHTT--------CCCC-TTEEEEE--
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHH----HHHHHHhC---CCCEEEEEeh-HHHHHh--------hhhc-CCCEEEe--
Confidence 45666665 34567999999999863 34444442 5689999987 333322 2211 1234432
Q ss_pred ccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcE-EEEEeecCCCCCCChHHHHHHHHHHHHHH
Q 045494 329 KKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRV-VTLVEQEISHGGDDPNRHRVEHCLLYREI 406 (492)
Q Consensus 329 ~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkv-vvlvEqea~hnsd~~eR~~iE~~~lgreI 406 (492)
.+..+ .+. .++++..+..+|.+.+. ....+|+.+ +.|+|.- ++++|.-.....+... .++......+
T Consensus 253 ~d~~~----~~p--~~D~v~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~d~ 321 (368)
T 3reo_A 253 GDMFD----GVP--KGDAIFIKWICHDWSDE--HCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSI---ATKVVIHTDA 321 (368)
T ss_dssp CCTTT----CCC--CCSEEEEESCGGGBCHH--HHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCH---HHHHHHHHHH
T ss_pred cCCCC----CCC--CCCEEEEechhhcCCHH--HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCch---hhhHHHhhhH
Confidence 22222 111 24666666666655331 234567766 6789976 4455654433222211 1111111222
Q ss_pred HHHHhh-cCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 407 NNILAI-GGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 407 ~NiVAc-EG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
.-.+.+ .|.+| +.+.|+..+.. |||+.+.+
T Consensus 322 ~~~~~~~~g~~r----t~~e~~~ll~~-AGF~~v~~ 352 (368)
T 3reo_A 322 LMLAYNPGGKER----TEKEFQALAMA-SGFRGFKV 352 (368)
T ss_dssp HHHHHSSBCCCC----CHHHHHHHHHH-TTCCEEEE
T ss_pred HHHhhcCCCccC----CHHHHHHHHHH-CCCeeeEE
Confidence 222222 45444 34789999999 99998765
No 20
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=94.21 E-value=1.4 Score=41.05 Aligned_cols=157 Identities=13% Similarity=0.239 Sum_probs=85.1
Q ss_pred hHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeee
Q 045494 249 NQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPI 327 (492)
Q Consensus 249 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V 327 (492)
+.-+++.+.-.+.-+|+|+|.+.|. +...|+.+. + ++|||+.+...++.+.+++ +..|++ ++|.
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s~~~~~~a~~~~----~~~~~~~v~~~-- 74 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDATKEMVEVASSFA----QEKGVENVRFQ-- 74 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESCHHHHHHHHHHH----HHHTCCSEEEE--
T ss_pred cchHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECCHHHHHHHHHHH----HHcCCCCeEEE--
Confidence 3445566666666789999999886 444555542 2 8999999887776655544 334554 4443
Q ss_pred cccccccccccccccCC--CeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEE-eecCCCCCCChHHHHHHHHHHH
Q 045494 328 AKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLV-EQEISHGGDDPNRHRVEHCLLY 403 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~Pkvvvlv-Eqea~hnsd~~eR~~iE~~~lg 403 (492)
..+.+++. ..++ +.|+++..+|.+.+ ...+|+ ..+-|+|.-.+++ +..... .+. +.. + .
T Consensus 75 ~~d~~~~~-----~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~---~~~-~-~ 137 (239)
T 1xxl_A 75 QGTAESLP-----FPDDSFDIITCRYAAHHFSD----VRKAVREVARVLKQDGRFLLVDHYAPE---DPV---LDE-F-V 137 (239)
T ss_dssp ECBTTBCC-----SCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEECBCS---SHH---HHH-H-H
T ss_pred ecccccCC-----CCCCcEEEEEECCchhhccC----HHHHHHHHHHHcCCCcEEEEEEcCCCC---Chh---HHH-H-H
Confidence 33333332 2222 23444544554422 345555 4577899876655 433221 121 111 1 1
Q ss_pred HHHHHHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 404 REINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 404 reI~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
..+.. . ..+ ...+.-+...|...|.. +||..+.+
T Consensus 138 ~~~~~-~-~~~-~~~~~~~~~~~~~ll~~-aGf~~~~~ 171 (239)
T 1xxl_A 138 NHLNR-L-RDP-SHVRESSLSEWQAMFSA-NQLAYQDI 171 (239)
T ss_dssp HHHHH-H-HCT-TCCCCCBHHHHHHHHHH-TTEEEEEE
T ss_pred HHHHH-h-ccc-cccCCCCHHHHHHHHHH-CCCcEEEE
Confidence 11111 1 112 11233467889999999 99986544
No 21
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=94.18 E-value=0.4 Score=47.08 Aligned_cols=160 Identities=18% Similarity=0.177 Sum_probs=85.5
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
..|++.+.-.. ..|+|+|.+.|. +...|+.+. |.+++|+++. ...++.+.+++.+.- +.-.++|.. .
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~--~ 224 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDR-EGSLGVARDNLSSLL--AGERVSLVG--G 224 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC-TTCTHHHHHHTHHHH--HTTSEEEEE--S
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCc-HHHHHHHHHHHhhcC--CCCcEEEec--C
Confidence 56666664344 899999999995 444454442 4579999998 566666666554331 111344532 2
Q ss_pred cccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEE-EEeecCCCCCCChHHHHHHHHHHHHHHH
Q 045494 330 KFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVT-LVEQEISHGGDDPNRHRVEHCLLYREIN 407 (492)
Q Consensus 330 ~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvv-lvEqea~hnsd~~eR~~iE~~~lgreI~ 407 (492)
+..+ + +. ..-+.+.++..+|...+. ....+|+.+ +.|+|.-.+ ++|.-........... ++. +.
T Consensus 225 d~~~--~--~~-~~~D~v~~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~-----~~~--~~ 290 (334)
T 2ip2_A 225 DMLQ--E--VP-SNGDIYLLSRIIGDLDEA--ASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSV-----LWD--VH 290 (334)
T ss_dssp CTTT--C--CC-SSCSEEEEESCGGGCCHH--HHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHH-----HHH--HH
T ss_pred CCCC--C--CC-CCCCEEEEchhccCCCHH--HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhH-----Hhh--hH
Confidence 2222 1 11 122455555556644221 223667655 678997654 4454332211111111 111 11
Q ss_pred HHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 408 NILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 408 NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
-.+.+.|.+| +.+.|+..+.. |||+.+..
T Consensus 291 ~~~~~~~~~~----t~~e~~~ll~~-aGf~~~~~ 319 (334)
T 2ip2_A 291 LFMACAGRHR----TTEEVVDLLGR-GGFAVERI 319 (334)
T ss_dssp HHHHHSCCCC----BHHHHHHHHHH-TTEEEEEE
T ss_pred hHhhCCCcCC----CHHHHHHHHHH-CCCceeEE
Confidence 1122345343 45789999999 99997765
No 22
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=94.11 E-value=0.36 Score=47.91 Aligned_cols=160 Identities=18% Similarity=0.238 Sum_probs=84.9
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC--ceEEeee
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL--SFEFHPI 327 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv--pFeF~~V 327 (492)
+.|++.+.-.+.-+|+|+|.+.|.-- ..|+.+. |.+++|+++. ...++.+.+++ +..|+ .++|..
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~----~~l~~~~---~~~~~~~~D~-~~~~~~a~~~~----~~~~~~~~v~~~~- 239 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFA----AAIARRA---PHVSATVLEM-AGTVDTARSYL----KDEGLSDRVDVVE- 239 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHH----HHHHHHC---TTCEEEEEEC-TTHHHHHHHHH----HHTTCTTTEEEEE-
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHH----HHHHHhC---CCCEEEEecC-HHHHHHHHHHH----HhcCCCCceEEEe-
Confidence 56777776556679999999999533 4444432 4589999986 45565555544 33455 355543
Q ss_pred cccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEE-EEEeec-CCCCCCChHHHHHHHHHHHH
Q 045494 328 AKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVV-TLVEQE-ISHGGDDPNRHRVEHCLLYR 404 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvv-vlvEqe-a~hnsd~~eR~~iE~~~lgr 404 (492)
.+..+ .+.- .-+.++++..+|.+.+. ....+|+.+ +.|+|.-. +++|.. ...+........+..
T Consensus 240 -~d~~~----~~~~-~~D~v~~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~----- 306 (360)
T 1tw3_A 240 -GDFFE----PLPR-KADAIILSFVLLNWPDH--DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDL----- 306 (360)
T ss_dssp -CCTTS----CCSS-CEEEEEEESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHH-----
T ss_pred -CCCCC----CCCC-CccEEEEcccccCCCHH--HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccH-----
Confidence 22222 0110 01234444455543221 123566655 66899864 445654 221111111111111
Q ss_pred HHHHHHhhcCCCcccccchhhHHHHHhccCCCeeccCC
Q 045494 405 EINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 405 eI~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
.-.+...|..| +.+.|+..|.. |||+.+...
T Consensus 307 --~~~~~~~~~~~----t~~e~~~ll~~-aGf~~~~~~ 337 (360)
T 1tw3_A 307 --RMLVFLGGALR----TREKWDGLAAS-AGLVVEEVR 337 (360)
T ss_dssp --HHHHHHSCCCC----BHHHHHHHHHH-TTEEEEEEE
T ss_pred --HHhhhcCCcCC----CHHHHHHHHHH-CCCeEEEEE
Confidence 11122334333 55799999999 999987653
No 23
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.08 E-value=0.21 Score=56.88 Aligned_cols=127 Identities=11% Similarity=0.109 Sum_probs=78.1
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHH--HHhCCceEEeee
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFA--KRLGLSFEFHPI 327 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA--~slgvpFeF~~V 327 (492)
+.|++.+.....-.|+|+|.|.| .+...|+.+ ++|.-++|||+.+...++.+.++|.... +..|++ ....+
T Consensus 711 e~LLelL~~~~g~rVLDVGCGTG----~lai~LAr~--g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~-nVefi 783 (950)
T 3htx_A 711 EYALKHIRESSASTLVDFGCGSG----SLLDSLLDY--PTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK-SATLY 783 (950)
T ss_dssp HHHHHHHHHSCCSEEEEETCSSS----HHHHHHTSS--CCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS-EEEEE
T ss_pred HHHHHHhcccCCCEEEEECCCCC----HHHHHHHHh--CCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC-ceEEE
Confidence 44566666556668999999999 455566655 4566799999999988988888887652 233543 22223
Q ss_pred cccccccccccccccCCCeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEeecCCCC
Q 045494 328 AKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVEQEISHG 388 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvEqea~hn 388 (492)
..+..++... ...=++|+++..+|.+.+. ....+++ ..+-|+|.++++...+.++|
T Consensus 784 qGDa~dLp~~---d~sFDlVV~~eVLeHL~dp--~l~~~L~eI~RvLKPG~LIISTPN~eyN 840 (950)
T 3htx_A 784 DGSILEFDSR---LHDVDIGTCLEVIEHMEED--QACEFGEKVLSLFHPKLLIVSTPNYEFN 840 (950)
T ss_dssp ESCTTSCCTT---SCSCCEEEEESCGGGSCHH--HHHHHHHHHHHTTCCSEEEEEECBGGGH
T ss_pred ECchHhCCcc---cCCeeEEEEeCchhhCChH--HHHHHHHHHHHHcCCCEEEEEecCchhh
Confidence 4444443321 1122455555555554331 1234564 46889999777777666543
No 24
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=94.01 E-value=0.7 Score=44.66 Aligned_cols=114 Identities=6% Similarity=0.026 Sum_probs=65.5
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++ +..|++-....+..
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~~~ 129 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTLSENQYAHDKAMF----DEVDSPRRKEVRIQ 129 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEECCHHHHHHHHHHH----HHSCCSSCEEEEEC
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEECCHHHHHHHHHHH----HhcCCCCceEEEEC
Confidence 345666655566789999998775 3444444422 58999999888776665554 44566522222333
Q ss_pred cccccccccccccCCCeEEEeeccccccCCC-----CccHHHHHHH-HhcCCcEEEEE
Q 045494 330 KFGDIDASMLQLRRGETLAVHWLQHSLYDAT-----GPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 330 ~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~-----~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
+..++ . ..=+.|+++..+|.+.+.. .....+|+.+ +-|+|.-.+++
T Consensus 130 d~~~~-~-----~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 130 GWEEF-D-----EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp CGGGC-C-----CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred CHHHc-C-----CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 34333 1 1113455555555554421 2235666544 77999866655
No 25
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=93.87 E-value=0.49 Score=46.83 Aligned_cols=161 Identities=12% Similarity=0.088 Sum_probs=85.5
Q ss_pred HHHhhhccCc-eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeee
Q 045494 251 AILEAFHRRD-RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPI 327 (492)
Q Consensus 251 AILEA~~g~~-~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V 327 (492)
.|++.+.-.+ ..+|+|+|.+.|. +...|+.+. |.+++|+++. ...++.+.+++ +..++. ++|..
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~----~~~~~~~~v~~~~- 235 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDL-PTTRDAARKTI----HAHDLGGRVEFFE- 235 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC-GGGHHHHHHHH----HHTTCGGGEEEEE-
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEEC-HHHHHHHHHHH----HhcCCCCceEEEe-
Confidence 6777776555 7899999999996 444455442 4589999987 34555444443 344553 55533
Q ss_pred cccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEE-EEeecCCCCCCChHHHHHHHHHHHHH
Q 045494 328 AKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVT-LVEQEISHGGDDPNRHRVEHCLLYRE 405 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvv-lvEqea~hnsd~~eR~~iE~~~lgre 405 (492)
.+..+... +....-+++.++..+|.+.+ .....+|+.+ +.|+|.-.+ ++|.-.+.....+.... ++.
T Consensus 236 -~d~~~~~~--~~~~~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~----~~~-- 304 (352)
T 3mcz_A 236 -KNLLDARN--FEGGAADVVMLNDCLHYFDA--REAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSA----DFS-- 304 (352)
T ss_dssp -CCTTCGGG--GTTCCEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHH----HHH--
T ss_pred -CCcccCcc--cCCCCccEEEEecccccCCH--HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHH----Hhh--
Confidence 22222110 00011134444545565422 1235677655 678997655 44544333222221111 111
Q ss_pred HHHHHhh-cCCCcccccchhhHHHHHhccCCCeecc
Q 045494 406 INNILAI-GGPARSGEDKFKHWRSELARCNGFAQVP 440 (492)
Q Consensus 406 I~NiVAc-EG~~R~rhE~~~~Wr~rm~~~AGF~~v~ 440 (492)
+.-.+.+ .|..| +.+.|+..+.. |||+.+.
T Consensus 305 ~~~~~~~~~~~~~----t~~e~~~ll~~-aGf~~~~ 335 (352)
T 3mcz_A 305 LHMMVNTNHGELH----PTPWIAGVVRD-AGLAVGE 335 (352)
T ss_dssp HHHHHHSTTCCCC----CHHHHHHHHHH-TTCEEEE
T ss_pred HHHHhhCCCCCcC----CHHHHHHHHHH-CCCceee
Confidence 1112222 23333 45789999999 9999876
No 26
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=93.86 E-value=1 Score=41.91 Aligned_cols=125 Identities=10% Similarity=0.024 Sum_probs=70.1
Q ss_pred HHhcCCccchhhhhhhHHHHhhhcc-CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 234 FNNVSPFIKFAHFTSNQAILEAFHR-RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 234 f~e~sP~~kfa~ftANqAILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
+|+..+-..-.+......+++.+.+ ...-+|+|+|.|.|.. ...|+.+.+ . ++|||+.+...++.+.++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~----~~~l~~~~~---~-~v~~vD~s~~~~~~a~~~-- 88 (257)
T 3f4k_A 19 YFKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGGQ----TLFLADYVK---G-QITGIDLFPDFIEIFNEN-- 88 (257)
T ss_dssp HHTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHH----HHHHHHHCC---S-EEEEEESCHHHHHHHHHH--
T ss_pred HHcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHH----HHHHHHhCC---C-eEEEEECCHHHHHHHHHH--
Confidence 3444444444444445556666643 3345899999998864 334444432 2 999999988777655544
Q ss_pred HHHHHhCCc--eEEeeecccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 313 NFAKRLGLS--FEFHPIAKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 313 ~fA~slgvp--FeF~~V~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
++..|++ .+|. ..+.+++. ..++ +.|.++..+|.+ + ...+|+.+ +-|+|.-.+++.
T Consensus 89 --~~~~~~~~~~~~~--~~d~~~~~-----~~~~~fD~v~~~~~l~~~-~----~~~~l~~~~~~L~pgG~l~~~ 149 (257)
T 3f4k_A 89 --AVKANCADRVKGI--TGSMDNLP-----FQNEELDLIWSEGAIYNI-G----FERGMNEWSKYLKKGGFIAVS 149 (257)
T ss_dssp --HHHTTCTTTEEEE--ECCTTSCS-----SCTTCEEEEEEESCSCCC-C----HHHHHHHHHTTEEEEEEEEEE
T ss_pred --HHHcCCCCceEEE--ECChhhCC-----CCCCCEEEEEecChHhhc-C----HHHHHHHHHHHcCCCcEEEEE
Confidence 4556765 5553 33333332 2222 234445444443 2 45566655 669998766553
No 27
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=93.70 E-value=1.4 Score=41.52 Aligned_cols=151 Identities=16% Similarity=0.172 Sum_probs=77.6
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeeccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIAKKFGDIDASM 338 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~~~~eel~~~~ 338 (492)
+.-+|+|+|.+.|. +...|+.+. |..++|||+.+...++.+.+++ +..|++ .+|. ..+..++.
T Consensus 37 ~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~--~~d~~~~~--- 100 (276)
T 3mgg_A 37 PGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDISPESLEKARENT----EKNGIKNVKFL--QANIFSLP--- 100 (276)
T ss_dssp TTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESCHHHHHHHHHHH----HHTTCCSEEEE--ECCGGGCC---
T ss_pred CCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEE--EcccccCC---
Confidence 45689999999884 344455442 3469999999887776555544 344553 4443 22333322
Q ss_pred ccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE-eecCCCCC---CChHHHHHHHHHHHHHHHHHHh
Q 045494 339 LQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV-EQEISHGG---DDPNRHRVEHCLLYREINNILA 411 (492)
Q Consensus 339 l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv-Eqea~hns---d~~eR~~iE~~~lgreI~NiVA 411 (492)
..++ +.|.++..+|.+.+ .+.+|+.+ +-|+|.-++++ +.+..... +.......-. .......
T Consensus 101 --~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 169 (276)
T 3mgg_A 101 --FEDSSFDHIFVCFVLEHLQS----PEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWN-----CLIRVQA 169 (276)
T ss_dssp --SCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHH-----HHHHHHH
T ss_pred --CCCCCeeEEEEechhhhcCC----HHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHH-----HHHHHHH
Confidence 2222 23444545554432 34566554 67899866655 43322111 2222111111 1111112
Q ss_pred hcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 412 IGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 412 cEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
..|.. .-....|...|.+ |||+.+..
T Consensus 170 ~~~~~---~~~~~~l~~~l~~-aGf~~v~~ 195 (276)
T 3mgg_A 170 YMKGN---SLVGRQIYPLLQE-SGFEKIRV 195 (276)
T ss_dssp HTTCC---TTGGGGHHHHHHH-TTCEEEEE
T ss_pred hcCCC---cchHHHHHHHHHH-CCCCeEEE
Confidence 12211 1233678888999 99985433
No 28
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=93.16 E-value=2.5 Score=40.89 Aligned_cols=109 Identities=8% Similarity=0.047 Sum_probs=61.3
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeec
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIA 328 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~ 328 (492)
.|++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++ +..|++ .+| +.
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~--~~ 146 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTLSKNQHARCEQVL----ASIDTNRSRQV--LL 146 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCHHHHHHHHHHH----HTSCCSSCEEE--EE
T ss_pred HHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEECCHHHHHHHHHHH----HhcCCCCceEE--EE
Confidence 45555554556689999998875 3334444432 39999999887776655543 344553 444 33
Q ss_pred ccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE
Q 045494 329 KKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 329 ~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
.+..+++ ..=+.|+++..+|.+.. .....+|+.+ +-|+|.-.+++
T Consensus 147 ~d~~~~~------~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 147 QGWEDFA------EPVDRIVSIEAFEHFGH--ENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp SCGGGCC------CCCSEEEEESCGGGTCG--GGHHHHHHHHHHHSCTTCEEEE
T ss_pred CChHHCC------CCcCEEEEeChHHhcCH--HHHHHHHHHHHHhcCCCcEEEE
Confidence 3343332 11234555544544421 1245566554 77899865554
No 29
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=93.11 E-value=0.39 Score=48.55 Aligned_cols=157 Identities=16% Similarity=0.214 Sum_probs=82.8
Q ss_pred HHHHhhhc-cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeec
Q 045494 250 QAILEAFH-RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIA 328 (492)
Q Consensus 250 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~ 328 (492)
..|++++. -...-+|+|+|.+.|.--. .|+.+. |.+++|+++. ...++. |+.. -..+|..
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~----~l~~~~---p~~~~~~~D~-~~~~~~--------a~~~-~~v~~~~-- 250 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVA----AIAAHY---PTIKGVNFDL-PHVISE--------APQF-PGVTHVG-- 250 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHH----HHHHHC---TTCEEEEEEC-HHHHTT--------CCCC-TTEEEEE--
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHH----HHHHHC---CCCeEEEecC-HHHHHh--------hhhc-CCeEEEe--
Confidence 45677765 3456799999999996433 444332 5678999987 333322 2211 1234432
Q ss_pred ccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEE-EEeecCCCCCCChHHHHHHHHHHHHHH
Q 045494 329 KKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVT-LVEQEISHGGDDPNRHRVEHCLLYREI 406 (492)
Q Consensus 329 ~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvv-lvEqea~hnsd~~eR~~iE~~~lgreI 406 (492)
.+..+ .+. .++++.....+|.+.+. ....+|+.+ +.|+|.-.+ ++|.-.+...+... .++......+
T Consensus 251 ~D~~~----~~p--~~D~v~~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~d~ 319 (364)
T 3p9c_A 251 GDMFK----EVP--SGDTILMKWILHDWSDQ--HCATLLKNCYDALPAHGKVVLVQCILPVNPEANP---SSQGVFHVDM 319 (364)
T ss_dssp CCTTT----CCC--CCSEEEEESCGGGSCHH--HHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSH---HHHHHHHHHH
T ss_pred CCcCC----CCC--CCCEEEehHHhccCCHH--HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcch---hhhhHHHhHH
Confidence 22222 111 24566666566654331 234677766 668997644 55654433222111 1111111122
Q ss_pred HHH-HhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 407 NNI-LAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 407 ~Ni-VAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
.-. +...|.+| +.+.|+..+.. |||+.+.+
T Consensus 320 ~m~~~~~~g~~r----t~~e~~~ll~~-AGF~~v~~ 350 (364)
T 3p9c_A 320 IMLAHNPGGRER----YEREFQALARG-AGFTGVKS 350 (364)
T ss_dssp HHHHHCSSCCCC----BHHHHHHHHHH-TTCCEEEE
T ss_pred HHHhcccCCccC----CHHHHHHHHHH-CCCceEEE
Confidence 111 12345444 34789999999 99998765
No 30
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=93.05 E-value=0.29 Score=48.78 Aligned_cols=157 Identities=10% Similarity=0.081 Sum_probs=82.3
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC--ceEEeee
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL--SFEFHPI 327 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv--pFeF~~V 327 (492)
..|++.+.-.+.-+|+|+|.+.|.- ...|+.+. |.+++|+++.+. .+. .+.++..++ ..+|..
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~-~~~------~~~~~~~~~~~~v~~~~- 238 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGF----LLTVLREH---PGLQGVLLDRAE-VVA------RHRLDAPDVAGRWKVVE- 238 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHH----HHHHHHHC---TTEEEEEEECHH-HHT------TCCCCCGGGTTSEEEEE-
T ss_pred HHHHHhCCccCCceEEEECCccCHH----HHHHHHHC---CCCEEEEecCHH-Hhh------cccccccCCCCCeEEEe-
Confidence 4677777656678999999999964 33444332 468999998742 221 111111222 245533
Q ss_pred cccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEE-EEeecCCCCCCChHHHHHHHHHHHHH
Q 045494 328 AKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVT-LVEQEISHGGDDPNRHRVEHCLLYRE 405 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvv-lvEqea~hnsd~~eR~~iE~~~lgre 405 (492)
.+..+ .+. .-+++.++..+|.+.+. ....+|+.+ +.|+|.-.+ ++|.-........... .+ .
T Consensus 239 -~d~~~----~~p--~~D~v~~~~vlh~~~d~--~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~-----~~--d 302 (348)
T 3lst_A 239 -GDFLR----EVP--HADVHVLKRILHNWGDE--DSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSK-----EM--D 302 (348)
T ss_dssp -CCTTT----CCC--CCSEEEEESCGGGSCHH--HHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHH-----HH--H
T ss_pred -cCCCC----CCC--CCcEEEEehhccCCCHH--HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhh-----hc--C
Confidence 22211 111 23455555556654321 124677766 678997555 4454333221111111 11 1
Q ss_pred HHHHHhhcCCCcccccchhhHHHHHhccCCCeeccCC
Q 045494 406 INNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 406 I~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
+.-.+...|..| +.+.|+..+.. |||+.+.+.
T Consensus 303 ~~~~~~~~~~~~----t~~e~~~ll~~-aGf~~~~~~ 334 (348)
T 3lst_A 303 FMMLAARTGQER----TAAELEPLFTA-AGLRLDRVV 334 (348)
T ss_dssp HHHHHTTSCCCC----BHHHHHHHHHH-TTEEEEEEE
T ss_pred hhhhhcCCCcCC----CHHHHHHHHHH-CCCceEEEE
Confidence 111222344333 45789999999 999987663
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=93.00 E-value=1.6 Score=40.43 Aligned_cols=165 Identities=17% Similarity=0.104 Sum_probs=85.7
Q ss_pred CCccchhhhhhhHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHH
Q 045494 238 SPFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKR 317 (492)
Q Consensus 238 sP~~kfa~ftANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~s 317 (492)
.++.+-.+-..-..|++.+.-...-+|+|+|.|.|..- ..|+.+.+ .++|||+.+...++.+.++ ++.
T Consensus 14 ~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~----~~la~~~~----~~v~gvD~s~~~l~~a~~~----~~~ 81 (256)
T 1nkv_A 14 HRIHNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEML----CTWARDHG----ITGTGIDMSSLFTAQAKRR----AEE 81 (256)
T ss_dssp CSSSSSCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHH----HHHHHHTC----CEEEEEESCHHHHHHHHHH----HHH
T ss_pred ccccCCCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHH----HHHHHhcC----CeEEEEeCCHHHHHHHHHH----HHh
Confidence 33333333334455666665455568999999998733 34444432 3789999988777665544 344
Q ss_pred hCCc--eEEeeecccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE-eecCCCCCCC
Q 045494 318 LGLS--FEFHPIAKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV-EQEISHGGDD 391 (492)
Q Consensus 318 lgvp--FeF~~V~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv-Eqea~hnsd~ 391 (492)
.|++ .+|.. .+.+++.. ++ +.|+++..+|.+.+ ...+|+.+ +-|+|.-.+++ +....... .
T Consensus 82 ~~~~~~v~~~~--~d~~~~~~------~~~fD~V~~~~~~~~~~~----~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-~ 148 (256)
T 1nkv_A 82 LGVSERVHFIH--NDAAGYVA------NEKCDVAACVGATWIAGG----FAGAEELLAQSLKPGGIMLIGEPYWRQLP-A 148 (256)
T ss_dssp TTCTTTEEEEE--SCCTTCCC------SSCEEEEEEESCGGGTSS----SHHHHHHHTTSEEEEEEEEEEEEEETTCC-S
T ss_pred cCCCcceEEEE--CChHhCCc------CCCCCEEEECCChHhcCC----HHHHHHHHHHHcCCCeEEEEecCcccCCC-C
Confidence 5664 55543 33333321 12 23433434444322 45566555 67899866555 43322211 1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 392 PNRHRVEHCLLYREINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 392 ~eR~~iE~~~lgreI~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
.. ++.... .+....+.-+...|...|.. +||+.+..
T Consensus 149 ~~-----------~~~~~~--~~~~~~~~~~~~~~~~~l~~-aGf~~~~~ 184 (256)
T 1nkv_A 149 TE-----------EIAQAC--GVSSTSDFLTLPGLVGAFDD-LGYDVVEM 184 (256)
T ss_dssp SH-----------HHHHTT--TCSCGGGSCCHHHHHHHHHT-TTBCCCEE
T ss_pred hH-----------HHHHHH--hcccccccCCHHHHHHHHHH-CCCeeEEE
Confidence 11 011111 11111223455678888888 88876543
No 32
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=92.97 E-value=1.1 Score=43.56 Aligned_cols=108 Identities=11% Similarity=0.025 Sum_probs=62.5
Q ss_pred HHHHhhhc-cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEee
Q 045494 250 QAILEAFH-RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHP 326 (492)
Q Consensus 250 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~ 326 (492)
+.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.++ ++..|++ .+|.
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~----~~~~~~~~~v~~~- 172 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTLSAAQADFGNRR----ARELRIDDHVRSR- 172 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCHHHHHHHHHH----HHHTTCTTTEEEE-
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeCCHHHHHHHHHH----HHHcCCCCceEEE-
Confidence 34666665 3445689999999884 3344444432 5899999987777655554 4455665 5553
Q ss_pred ecccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEE
Q 045494 327 IAKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLV 381 (492)
Q Consensus 327 V~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~Pkvvvlv 381 (492)
..+.+++. ..++ +.|+.+..+|.+ + ...+|+. .+-|+|.-.+++
T Consensus 173 -~~d~~~~~-----~~~~~fD~V~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 173 -VCNMLDTP-----FDKGAVTASWNNESTMYV-D----LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp -ECCTTSCC-----CCTTCEEEEEEESCGGGS-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred -ECChhcCC-----CCCCCEeEEEECCchhhC-C----HHHHHHHHHHHcCCCcEEEE
Confidence 33333332 2222 234444445544 3 4556654 478999766654
No 33
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=92.92 E-value=1.6 Score=41.81 Aligned_cols=113 Identities=12% Similarity=0.053 Sum_probs=63.2
Q ss_pred HHHHhhh----ccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eE
Q 045494 250 QAILEAF----HRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FE 323 (492)
Q Consensus 250 qAILEA~----~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--Fe 323 (492)
..|++.+ .-...-+|+|+|.|.|..-..|.+.+ + .++|||+.+...++.+.+++ +..|++ ++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~~~ 135 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIAPVQNKRNEEYN----NQAGLADNIT 135 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCHHHHHHHHHHH----HHHTCTTTEE
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCCHHHHHHHHHHH----HhcCCCcceE
Confidence 4455555 33455689999999887555444433 2 38999999887776665554 334553 44
Q ss_pred EeeecccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEE-eecC
Q 045494 324 FHPIAKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLV-EQEI 385 (492)
Q Consensus 324 F~~V~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~Pkvvvlv-Eqea 385 (492)
|. ..+..++. ..++ +.|.++..+|.+.+ ...+|+. .+-|+|.-.+++ +...
T Consensus 136 ~~--~~d~~~~~-----~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 136 VK--YGSFLEIP-----CEDNSYDFIWSQDAFLHSPD----KLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp EE--ECCTTSCS-----SCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EE--EcCcccCC-----CCCCCEeEEEecchhhhcCC----HHHHHHHHHHHcCCCeEEEEEEecc
Confidence 43 33333332 2223 23444444444432 4556654 477899765544 4443
No 34
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=92.64 E-value=0.55 Score=47.64 Aligned_cols=154 Identities=12% Similarity=0.090 Sum_probs=83.7
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHh-C----CceEEeeeccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRL-G----LSFEFHPIAKKFGDI 334 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~sl-g----vpFeF~~V~~~~eel 334 (492)
+.-.|+|+|.+.|.-=..|.+.+ .|..++|||+.+...++.+.+++.+.+... | -..+|.. .+.+++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~--~d~~~l 154 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLK--GFIENL 154 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE--SCTTCG
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEE--ccHHHh
Confidence 44589999999985333333332 133599999999988988888888877665 4 2445533 333332
Q ss_pred ccc-cccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEE-eecCCCCCCChHHHHHHHHHHHHHHHHH
Q 045494 335 DAS-MLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLV-EQEISHGGDDPNRHRVEHCLLYREINNI 409 (492)
Q Consensus 335 ~~~-~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~Pkvvvlv-Eqea~hnsd~~eR~~iE~~~lgreI~Ni 409 (492)
... ...+.++ +.|+.|..+|.+.+ ...+|+. .+-|+|.-.+++ +...+.. ......-...+++
T Consensus 155 ~~~~~~~~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~~~~~~~~--~~~~~~~~~~~~~------ 222 (383)
T 4fsd_A 155 ATAEPEGVPDSSVDIVISNCVCNLSTN----KLALFKEIHRVLRDGGELYFSDVYADRR--LSEAAQQDPILYG------ 222 (383)
T ss_dssp GGCBSCCCCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEEEESSC--CCHHHHHCHHHHH------
T ss_pred hhcccCCCCCCCEEEEEEccchhcCCC----HHHHHHHHHHHcCCCCEEEEEEeccccc--cCHhHhhhHHHhh------
Confidence 110 0022222 34556666665432 3556654 478899876655 4433321 1111111110110
Q ss_pred HhhcCCCcccccchhhHHHHHhccCCCeec
Q 045494 410 LAIGGPARSGEDKFKHWRSELARCNGFAQV 439 (492)
Q Consensus 410 VAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v 439 (492)
... .+.-..+.|+..|.+ +||+.+
T Consensus 223 ---~~~--~~~~~~~~~~~ll~~-aGF~~v 246 (383)
T 4fsd_A 223 ---ECL--GGALYLEDFRRLVAE-AGFRDV 246 (383)
T ss_dssp ---TTC--TTCCBHHHHHHHHHH-TTCCCE
T ss_pred ---ccc--ccCCCHHHHHHHHHH-CCCceE
Confidence 111 122345778888888 888755
No 35
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=92.25 E-value=0.64 Score=42.36 Aligned_cols=121 Identities=17% Similarity=0.163 Sum_probs=69.4
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC------ceE
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL------SFE 323 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv------pFe 323 (492)
+.|++.+...+.-.|+|+|.+.|. +...|+.+. |..++|||+.+...++.+.+++.. .++ .++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~~~~~a~~~~~~----~~~~~~~~~~v~ 87 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVSYSVLERAKDRLKI----DRLPEMQRKRIS 87 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESCHHHHHHHHHHHTG----GGSCHHHHTTEE
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECCHHHHHHHHHHHHh----hccccccCcceE
Confidence 445555554555689999999986 555566542 347999999988877766665432 222 234
Q ss_pred EeeecccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEeecCCCC
Q 045494 324 FHPIAKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVEQEISHG 388 (492)
Q Consensus 324 F~~V~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvEqea~hn 388 (492)
|. ..+...+.. ....=+.|+.+..+|.+.+ .....+|+.+ +.|+|..++++.....++
T Consensus 88 ~~--~~d~~~~~~---~~~~fD~V~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~~i~~~~~~~~ 146 (219)
T 3jwg_A 88 LF--QSSLVYRDK---RFSGYDAATVIEVIEHLDE--NRLQAFEKVLFEFTRPQTVIVSTPNKEYN 146 (219)
T ss_dssp EE--ECCSSSCCG---GGTTCSEEEEESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEBGGGG
T ss_pred EE--eCccccccc---ccCCCCEEEEHHHHHhCCH--HHHHHHHHHHHHhhCCCEEEEEccchhhh
Confidence 43 222322221 1111234555545554421 1134666655 778999888777665543
No 36
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=91.84 E-value=1.1 Score=42.64 Aligned_cols=109 Identities=17% Similarity=0.155 Sum_probs=61.2
Q ss_pred HHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccc
Q 045494 252 ILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKF 331 (492)
Q Consensus 252 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~ 331 (492)
+++.+... .-+|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.+++. ..|++-....+..+.
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~~~d~ 126 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQ----TAIKMAER--G---HQVILCDLSAQMIDRAKQAAE----AKGVSDNMQFIHCAA 126 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHHHH----C-CCGGGEEEEESCG
T ss_pred HHHhcCCC-CCEEEEeCCcchH----HHHHHHHC--C---CEEEEEECCHHHHHHHHHHHH----hcCCCcceEEEEcCH
Confidence 34444333 5689999999984 45556665 2 489999998877766555543 446542222233334
Q ss_pred cccccccccccCC--CeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEe
Q 045494 332 GDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVE 382 (492)
Q Consensus 332 eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvE 382 (492)
.++.. ..++ +.|+++..+|.+. ++ ..+|+ ..+-|+|.-.+++.
T Consensus 127 ~~~~~----~~~~~fD~v~~~~~l~~~~---~~-~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 127 QDVAS----HLETPVDLILFHAVLEWVA---DP-RSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp GGTGG----GCSSCEEEEEEESCGGGCS---CH-HHHHHHHHHTEEEEEEEEEE
T ss_pred HHhhh----hcCCCceEEEECchhhccc---CH-HHHHHHHHHHcCCCeEEEEE
Confidence 33321 1122 2344454454442 22 45555 45779998777664
No 37
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=91.60 E-value=1.1 Score=40.89 Aligned_cols=104 Identities=13% Similarity=0.170 Sum_probs=56.9
Q ss_pred HHHHhhhcc-CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeec
Q 045494 250 QAILEAFHR-RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIA 328 (492)
Q Consensus 250 qAILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~ 328 (492)
+.+++.+.. .+.-+|+|+|.+.|. +...|+.+ ++ ++|||+.+...++.+.+++.. .++|. .
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~~~~~a~~~~~~-------~v~~~--~ 92 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGD----FTSRLQEH--FN---DITCVEASEEAISHAQGRLKD-------GITYI--H 92 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSH----HHHHHTTT--CS---CEEEEESCHHHHHHHHHHSCS-------CEEEE--E
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCCHHHHHHHHHhhhC-------CeEEE--E
Confidence 334454442 233369999999885 44556654 33 799999987766555444322 33332 2
Q ss_pred ccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHHH--hcCCcEEEEE
Q 045494 329 KKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLLE--ELSPRVVTLV 381 (492)
Q Consensus 329 ~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~Ir--~L~Pkvvvlv 381 (492)
.+.+++. .++ +.|+++..+|.+.+ ...+|+.++ -|+|.-.+++
T Consensus 93 ~d~~~~~------~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 93 SRFEDAQ------LPRRYDNIVLTHVLEHIDD----PVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp SCGGGCC------CSSCEEEEEEESCGGGCSS----HHHHHHHHHHTTEEEEEEEEE
T ss_pred ccHHHcC------cCCcccEEEEhhHHHhhcC----HHHHHHHHHHHhcCCCCEEEE
Confidence 3333331 112 23444444554432 356776665 7899766555
No 38
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=91.47 E-value=0.4 Score=43.70 Aligned_cols=153 Identities=16% Similarity=0.112 Sum_probs=78.3
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC------ceEEeeeccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL------SFEFHPIAKKFGDI 334 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv------pFeF~~V~~~~eel 334 (492)
.-.|+|+|.+.|. +...|+.+ | .++|||+.+...++.+.++ ++..++ .++| +..+..++
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~--~~~d~~~~ 95 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK--G---YSVTGIDINSEAIRLAETA----ARSPGLNQKTGGKAEF--KVENASSL 95 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHH----TTCCSCCSSSSCEEEE--EECCTTSC
T ss_pred CCeEEEECCCCCH----HHHHHHhC--C---CeEEEEECCHHHHHHHHHH----HHhcCCccccCcceEE--EEeccccc
Confidence 3479999999985 34445555 2 4899999887666544333 334454 2333 22333332
Q ss_pred ccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE-eecCCCCCCChHHHHHHHHHHHHHHHHHH
Q 045494 335 DASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV-EQEISHGGDDPNRHRVEHCLLYREINNIL 410 (492)
Q Consensus 335 ~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv-Eqea~hnsd~~eR~~iE~~~lgreI~NiV 410 (492)
. ..++ +.|+++..+|.+.+. ..+..+|+.+ +.|+|.-.+++ +...+. .... +.. .+.. .....
T Consensus 96 ~-----~~~~~~D~v~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~--~~~~---~~~-~~~~-~~~~~ 162 (235)
T 3sm3_A 96 S-----FHDSSFDFAVMQAFLTSVPDP-KERSRIIKEVFRVLKPGAYLYLVEFGQNW--HLKL---YRK-RYLH-DFPIT 162 (235)
T ss_dssp C-----SCTTCEEEEEEESCGGGCCCH-HHHHHHHHHHHHHEEEEEEEEEEEEBCCT--TSHH---HHH-HHHH-HHHHH
T ss_pred C-----CCCCceeEEEEcchhhcCCCH-HHHHHHHHHHHHHcCCCeEEEEEECCcch--hHHH---HHH-Hhhh-hccch
Confidence 2 2122 234445445544321 1123566655 67899866654 432221 1111 111 1111 11222
Q ss_pred hhcCCCc------------ccccchhhHHHHHhccCCCeeccCC
Q 045494 411 AIGGPAR------------SGEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 411 AcEG~~R------------~rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
..+|.-. .+.-+.+.|+..|.. +||+.+.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~-aGf~~~~~~ 205 (235)
T 3sm3_A 163 KEEGSFLARDPETGETEFIAHHFTEKELVFLLTD-CRFEIDYFR 205 (235)
T ss_dssp CSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHT-TTEEEEEEE
T ss_pred hhhcceEecccccCCcceeeEeCCHHHHHHHHHH-cCCEEEEEE
Confidence 2222111 123467889999999 999988774
No 39
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=90.95 E-value=3.9 Score=39.05 Aligned_cols=106 Identities=18% Similarity=0.216 Sum_probs=60.0
Q ss_pred CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccc
Q 045494 259 RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASM 338 (492)
Q Consensus 259 ~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~ 338 (492)
.+.-.|+|+|.+.|. +...|+.+. |+..++|||+.+...++.+.+++ +..+..++|. ..+..++...
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~v~~~--~~d~~~~~~~- 87 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDSGETLLAEARELF----RLLPYDSEFL--EGDATEIELN- 87 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEESCHHHHHHHHHHH----HSSSSEEEEE--ESCTTTCCCS-
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEECCHHHHHHHHHHH----HhcCCceEEE--EcchhhcCcC-
Confidence 456789999999983 444555552 23479999999877666555443 3344444443 3334333211
Q ss_pred ccccCCCeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEE-eec
Q 045494 339 LQLRRGETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLV-EQE 384 (492)
Q Consensus 339 l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~Pkvvvlv-Eqe 384 (492)
..=+.|.++..+|.+.+ ...+|+ ..+.|+|.-.+++ |.+
T Consensus 88 ---~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 ---DKYDIAICHAFLLHMTT----PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ---SCEEEEEEESCGGGCSS----HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ---CCeeEEEECChhhcCCC----HHHHHHHHHHHcCCCCEEEEEecc
Confidence 01133445545554422 245555 4578899876654 544
No 40
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=90.69 E-value=0.83 Score=42.48 Aligned_cols=105 Identities=14% Similarity=0.081 Sum_probs=60.6
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccc
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKK 330 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~ 330 (492)
.+++.+.-...-.|+|+|.+.|.--..|.+.+ |..++|||+.+...++.+.++ .-.++|. ..+
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~--~~d 86 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSDDDMLEKAADR--------LPNTNFG--KAD 86 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESCHHHHHHHHHH--------STTSEEE--ECC
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECCHHHHHHHHHh--------CCCcEEE--ECC
Confidence 45555544455689999999987555555443 234899999987766655444 1123332 223
Q ss_pred ccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 331 FGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 331 ~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
.+++. .++ +.|+++..+|.+. ....+|+.+ +.|+|.-.+++.
T Consensus 87 ~~~~~------~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 87 LATWK------PAQKADLLYANAVFQWVP----DHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp TTTCC------CSSCEEEEEEESCGGGST----THHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhcC------ccCCcCEEEEeCchhhCC----CHHHHHHHHHHhcCCCeEEEEE
Confidence 33322 112 3455555555542 245666655 788998766554
No 41
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=90.65 E-value=3.3 Score=38.78 Aligned_cols=109 Identities=18% Similarity=0.237 Sum_probs=61.0
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeee
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPI 327 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V 327 (492)
..|++.+.-...-+|+|+|.+.|.. ...|+.+.+ .++|||+.+...++.+.+++ +..|++ ++|.
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~~----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~~~~~-- 116 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKP----AVRLATARD----VRVTGISISRPQVNQANARA----TAAGLANRVTFS-- 116 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHH----HHHHHHHSC----CEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEE--
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHH----HHHHHHhcC----CEEEEEeCCHHHHHHHHHHH----HhcCCCcceEEE--
Confidence 3455555544566999999998863 334444432 59999999877776554443 445654 4443
Q ss_pred cccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE
Q 045494 328 AKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
..+..++. ..++ +.|+.+..+|.+.+ ...+|+.+ +-|+|.-.+++
T Consensus 117 ~~d~~~~~-----~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 117 YADAMDLP-----FEDASFDAVWALESLHHMPD----RGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp ECCTTSCC-----SCTTCEEEEEEESCTTTSSC----HHHHHHHHHTTEEEEEEEEE
T ss_pred ECccccCC-----CCCCCccEEEEechhhhCCC----HHHHHHHHHHHcCCCeEEEE
Confidence 23333322 2222 23444434443322 35666655 66899865544
No 42
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=90.53 E-value=1.3 Score=43.02 Aligned_cols=158 Identities=13% Similarity=0.111 Sum_probs=80.8
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeecccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIAKKFGDIDAS 337 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~~~~eel~~~ 337 (492)
..-+|+|+|.|.|. +...||.+ ..|..++|||+.+...++.+.+++ +..|++ .+|. ..+..++..
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~--~~d~~~~~~- 184 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYDPEALDGATRLA----AGHALAGQITLH--RQDAWKLDT- 184 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESCHHHHHHHHHHH----TTSTTGGGEEEE--ECCGGGCCC-
T ss_pred CCCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECCHHHHHHHHHHH----HhcCCCCceEEE--ECchhcCCc-
Confidence 34579999999884 33444322 235679999999887776655544 445654 4443 333333321
Q ss_pred cccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEeecCCCCC-----------CChHHHHHHHHHHHHH
Q 045494 338 MLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVEQEISHGG-----------DDPNRHRVEHCLLYRE 405 (492)
Q Consensus 338 ~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvEqea~hns-----------d~~eR~~iE~~~lgre 405 (492)
. ..=++|+++..+|.+.+. .....+|+.+ +.|+|.-.+++..-..... .++......+..+...
T Consensus 185 --~-~~fD~v~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 260 (305)
T 3ocj_A 185 --R-EGYDLLTSNGLNIYEPDD-ARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRL 260 (305)
T ss_dssp --C-SCEEEEECCSSGGGCCCH-HHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHT
T ss_pred --c-CCeEEEEECChhhhcCCH-HHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHH
Confidence 1 111234444444443221 1122356554 6799988777632111100 1111111222122111
Q ss_pred HHHHHhhcCCCcccccchhhHHHHHhccCCCeeccCC
Q 045494 406 INNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 406 I~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
+. .+. ...-+.+.|+..|.. +||+.+.+.
T Consensus 261 ----~~-~~~--~~~~~~~~~~~~l~~-aGF~~v~~~ 289 (305)
T 3ocj_A 261 ----IQ-PRW--NALRTHAQTRAQLEE-AGFTDLRFE 289 (305)
T ss_dssp ----TC-CSC--CCCCCHHHHHHHHHH-TTCEEEEEE
T ss_pred ----Hh-hhh--hccCCHHHHHHHHHH-CCCEEEEEE
Confidence 11 111 122466889999999 999987764
No 43
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=90.34 E-value=1.3 Score=42.23 Aligned_cols=112 Identities=11% Similarity=0.037 Sum_probs=65.9
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
..+++.+...+.-.|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.++ ++..|+..+|. ..
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~--~~ 174 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHNENSIAFLNET----KEKENLNISTA--LY 174 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHH----HHHTTCCEEEE--EC
T ss_pred HHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECCHHHHHHHHHH----HHHcCCceEEE--Ee
Confidence 355566655566789999999996 44456655 3 4899999988777665554 34456655553 33
Q ss_pred cccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 330 KFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 330 ~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
+..++.. -..=+.|+++..+|.+.. .....+|+.+ +.|+|.-++++.
T Consensus 175 d~~~~~~----~~~fD~i~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 175 DINAANI----QENYDFIVSTVVFMFLNR--ERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp CGGGCCC----CSCEEEEEECSSGGGSCG--GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccccccc----cCCccEEEEccchhhCCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 3333221 001134555555554422 2245666655 778998775543
No 44
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=89.95 E-value=2.7 Score=38.90 Aligned_cols=100 Identities=17% Similarity=0.114 Sum_probs=56.8
Q ss_pred CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccc
Q 045494 259 RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASM 338 (492)
Q Consensus 259 ~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~ 338 (492)
.+.-.|+|+|.|.|.-- ..|+.+ + .++|||+.+...++.+.+++ +...-.++|. ..+.+++.
T Consensus 38 ~~~~~vLDiG~G~G~~~----~~l~~~-~----~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~--~~d~~~~~--- 99 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIA----LPLIAR-G----YRYIALDADAAMLEVFRQKI----AGVDRKVQVV--QADARAIP--- 99 (263)
T ss_dssp SSCCEEEEETCTTSTTH----HHHHTT-T----CEEEEEESCHHHHHHHHHHT----TTSCTTEEEE--ESCTTSCC---
T ss_pred CCCCEEEEeCCcCCHHH----HHHHHC-C----CEEEEEECCHHHHHHHHHHh----hccCCceEEE--EcccccCC---
Confidence 34568999999998642 344444 2 48999999887776655554 1122234443 22333322
Q ss_pred ccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEEe
Q 045494 339 LQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLVE 382 (492)
Q Consensus 339 l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~PkvvvlvE 382 (492)
..++ +.|.++..+|.+.+ ...+|+. .+-|+|.-.+++.
T Consensus 100 --~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 100 --LPDESVHGVIVVHLWHLVPD----WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp --SCTTCEEEEEEESCGGGCTT----HHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCCCeeEEEECCchhhcCC----HHHHHHHHHHHCCCCcEEEEE
Confidence 2222 34555555555432 3455554 4778998766654
No 45
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=89.70 E-value=1.1 Score=40.26 Aligned_cols=134 Identities=13% Similarity=0.039 Sum_probs=73.9
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
.-.|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.++ .-..+| +..+..++ .
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~~~~a~~~--------~~~~~~--~~~d~~~~-----~ 97 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPATRLVELARQT--------HPSVTF--HHGTITDL-----S 97 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCCHHHHHHHHHH--------CTTSEE--ECCCGGGG-----G
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCCHHHHHHHHHh--------CCCCeE--EeCccccc-----c
Confidence 5679999999986 45566665 2 3899999987766655444 112333 22233332 2
Q ss_pred ccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEEee-cCCCCCCChHHHHHHHHHHHHHHHHHHhhcCCC
Q 045494 341 LRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLVEQ-EISHGGDDPNRHRVEHCLLYREINNILAIGGPA 416 (492)
Q Consensus 341 l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~PkvvvlvEq-ea~hnsd~~eR~~iE~~~lgreI~NiVAcEG~~ 416 (492)
..++ +.|.++..+|.+. ......+|+. .+.|+|.-.+++.. ..... -...+..
T Consensus 98 ~~~~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~---------------------~~~~~~~ 154 (203)
T 3h2b_A 98 DSPKRWAGLLAWYSLIHMG--PGELPDALVALRMAVEDGGGLLMSFFSGPSL---------------------EPMYHPV 154 (203)
T ss_dssp GSCCCEEEEEEESSSTTCC--TTTHHHHHHHHHHTEEEEEEEEEEEECCSSC---------------------EEECCSS
T ss_pred cCCCCeEEEEehhhHhcCC--HHHHHHHHHHHHHHcCCCcEEEEEEccCCch---------------------hhhhchh
Confidence 2222 2344444444432 1234556654 47789986666542 22110 0000011
Q ss_pred -cccccchhhHHHHHhccCCCeeccCC
Q 045494 417 -RSGEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 417 -R~rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
....-+.+.|+..|.. +||+.+.+.
T Consensus 155 ~~~~~~~~~~~~~~l~~-~Gf~~~~~~ 180 (203)
T 3h2b_A 155 ATAYRWPLPELAQALET-AGFQVTSSH 180 (203)
T ss_dssp SCEEECCHHHHHHHHHH-TTEEEEEEE
T ss_pred hhhccCCHHHHHHHHHH-CCCcEEEEE
Confidence 1122456889999999 999987764
No 46
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=89.53 E-value=1.1 Score=44.58 Aligned_cols=146 Identities=14% Similarity=0.291 Sum_probs=75.5
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASML 339 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l 339 (492)
+.-+|+|+|.+.|. +...|+.+. |.+++|+++. ...++. |+... ..+|.. .+..+ .+
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~--------a~~~~-~v~~~~--~d~~~----~~ 244 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR-PQVVEN--------LSGSN-NLTYVG--GDMFT----SI 244 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HHHHTT--------CCCBT-TEEEEE--CCTTT----CC
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC-HHHHhh--------cccCC-CcEEEe--ccccC----CC
Confidence 34689999999994 455555543 4579999997 444432 22221 134432 22211 11
Q ss_pred cccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCC----cEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHhhcC
Q 045494 340 QLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSP----RVVTLVEQEISHGGDDPNRHRVEHCLLYREINNILAIGG 414 (492)
Q Consensus 340 ~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~P----kvvvlvEqea~hnsd~~eR~~iE~~~lgreI~NiVAcEG 414 (492)
. .-+++.++..+|.+.+. ....+|+.+ +.|+| -.++++|.-.......+.-..... ++ .+. +....|
T Consensus 245 p--~~D~v~~~~~lh~~~d~--~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~-~~--d~~-~~~~~g 316 (352)
T 1fp2_A 245 P--NADAVLLKYILHNWTDK--DCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKL-LM--DVN-MACLNG 316 (352)
T ss_dssp C--CCSEEEEESCGGGSCHH--HHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHH-HH--HHH-GGGGTC
T ss_pred C--CccEEEeehhhccCCHH--HHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHh-hc--cHH-HHhccC
Confidence 1 13456666566654321 123667655 66899 355666654433222211011111 11 111 122334
Q ss_pred CCcccccchhhHHHHHhccCCCeeccC
Q 045494 415 PARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 415 ~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
+++ +.+.|+..+.. |||+.+..
T Consensus 317 --~~~--t~~e~~~ll~~-aGf~~~~~ 338 (352)
T 1fp2_A 317 --KER--NEEEWKKLFIE-AGFQHYKI 338 (352)
T ss_dssp --CCE--EHHHHHHHHHH-TTCCEEEE
T ss_pred --CCC--CHHHHHHHHHH-CCCCeeEE
Confidence 333 45789999999 99997665
No 47
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=89.33 E-value=0.76 Score=42.74 Aligned_cols=121 Identities=11% Similarity=0.108 Sum_probs=65.4
Q ss_pred CccchhhhhhhHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHh
Q 045494 239 PFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRL 318 (492)
Q Consensus 239 P~~kfa~ftANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~sl 318 (492)
.++.-+....-..+++.+.-.+.-+|+|+|.+.|.- ...|+.+.+ .++|||+.+...++.+.+++...
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~----~~~l~~~~~----~~v~~vD~s~~~~~~a~~~~~~~---- 101 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLGGG----CMYINEKYG----AHTHGIDICSNIVNMANERVSGN---- 101 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHH----HHHHHHHHC----CEEEEEESCHHHHHHHHHTCCSC----
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHH----HHHHHHHcC----CEEEEEeCCHHHHHHHHHHhhcC----
Confidence 444444445557777777656667999999998853 333443322 48999999877665544433222
Q ss_pred CCceEEeeecccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEE
Q 045494 319 GLSFEFHPIAKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLV 381 (492)
Q Consensus 319 gvpFeF~~V~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~Pkvvvlv 381 (492)
-..+|. ..+..++ ...++ +.|+.+..+|.+.. .....+|+. .+-|+|.-.+++
T Consensus 102 -~~~~~~--~~d~~~~-----~~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 102 -NKIIFE--ANDILTK-----EFPENNFDLIYSRDAILALSL--ENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp -TTEEEE--ECCTTTC-----CCCTTCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCeEEE--ECccccC-----CCCCCcEEEEeHHHHHHhcCh--HHHHHHHHHHHHHcCCCCEEEE
Confidence 233332 2223222 12122 23444444444411 123455554 467899765544
No 48
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=88.75 E-value=2.1 Score=38.73 Aligned_cols=111 Identities=10% Similarity=0.057 Sum_probs=63.0
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccc
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKK 330 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~ 330 (492)
.+.+.+...+.-.|+|+|.+.|. +...|+.+ + -++|||+.+...++.+.+++.. .+ .++| +..+
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~--~~~d 105 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH--C---KRLTVIDVMPRAIGRACQRTKR----WS-HISW--AATD 105 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGG--E---EEEEEEESCHHHHHHHHHHTTT----CS-SEEE--EECC
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHc--C---CEEEEEECCHHHHHHHHHhccc----CC-CeEE--EEcc
Confidence 34445556677899999999994 45556655 2 4899999988777666555433 12 3344 3333
Q ss_pred ccccccccccccCCCeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEe
Q 045494 331 FGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVE 382 (492)
Q Consensus 331 ~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvE 382 (492)
..++.+. ..=+.|+++..+|.+.+. .....+|+ ..+.|+|.-++++.
T Consensus 106 ~~~~~~~----~~fD~v~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 106 ILQFSTA----ELFDLIVVAEVLYYLEDM-TQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp TTTCCCS----CCEEEEEEESCGGGSSSH-HHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhhCCCC----CCccEEEEccHHHhCCCH-HHHHHHHHHHHHHcCCCCEEEEE
Confidence 4333210 011345555455544321 12234555 44779998777664
No 49
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=88.66 E-value=4.3 Score=38.45 Aligned_cols=104 Identities=12% Similarity=0.155 Sum_probs=58.8
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
..+++.+.-...-.|+|+|.|.|.--. .|+. + ..++|||+.+...++.+.+++ -++. |. ..
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~----~l~~-~----~~~v~gvD~s~~~~~~a~~~~------~~~~--~~--~~ 107 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTE----KIAQ-S----GAEVLGTDNAATMIEKARQNY------PHLH--FD--VA 107 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHH----HHHH-T----TCEEEEEESCHHHHHHHHHHC------TTSC--EE--EC
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHH----HHHh-C----CCeEEEEECCHHHHHHHHhhC------CCCE--EE--EC
Confidence 345566654555689999999886433 3443 2 259999999877666554443 1333 32 22
Q ss_pred cccccccccccccCC--CeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEe
Q 045494 330 KFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVE 382 (492)
Q Consensus 330 ~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvE 382 (492)
+.+++. . ++ +.|+++..+|.+.+ ...+|+ ..+-|+|.-.+++.
T Consensus 108 d~~~~~-----~-~~~fD~v~~~~~l~~~~d----~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 108 DARNFR-----V-DKPLDAVFSNAMLHWVKE----PEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp CTTTCC-----C-SSCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred ChhhCC-----c-CCCcCEEEEcchhhhCcC----HHHHHHHHHHhcCCCcEEEEE
Confidence 233322 1 12 23444545554432 345555 45778998766664
No 50
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=88.54 E-value=1.2 Score=40.19 Aligned_cols=160 Identities=16% Similarity=0.214 Sum_probs=83.0
Q ss_pred hhHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeee
Q 045494 248 SNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPI 327 (492)
Q Consensus 248 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V 327 (492)
..+.|++.+.....-.|+|+|.+.|. +...|+.+ | .++|||+.+...++.+.++ .++. |..
T Consensus 40 ~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s~~~~~~a~~~-------~~~~--~~~- 100 (227)
T 3e8s_A 40 TDQAILLAILGRQPERVLDLGCGEGW----LLRALADR--G---IEAVGVDGDRTLVDAARAA-------GAGE--VHL- 100 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT--T---CEEEEEESCHHHHHHHHHT-------CSSC--EEE-
T ss_pred ccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC--C---CEEEEEcCCHHHHHHHHHh-------cccc--cch-
Confidence 45667777776666899999999984 55666666 2 3899999887666554443 2222 221
Q ss_pred cccccccccccccccCCC---eEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEee-cCCCCCCChHHHHHHHHHH
Q 045494 328 AKKFGDIDASMLQLRRGE---TLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVEQ-EISHGGDDPNRHRVEHCLL 402 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~gE---aLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvEq-ea~hnsd~~eR~~iE~~~l 402 (492)
.+..++... ...+++ .|+++..+| . .....+|+.+ +-|+|.-.+++.. ......... +...+.
T Consensus 101 -~~~~~~~~~--~~~~~~~fD~v~~~~~l~-~----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~----~~~~~~ 168 (227)
T 3e8s_A 101 -ASYAQLAEA--KVPVGKDYDLICANFALL-H----QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGD----YQDGWR 168 (227)
T ss_dssp -CCHHHHHTT--CSCCCCCEEEEEEESCCC-S----SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTC----CSCEEE
T ss_pred -hhHHhhccc--ccccCCCccEEEECchhh-h----hhHHHHHHHHHHHhCCCeEEEEEecCccccCccc----cccccc
Confidence 122222111 112222 344454455 1 2245566554 7889987766642 221111100 000000
Q ss_pred HHHHHHHHhhcCC--Cc-ccccchhhHHHHHhccCCCeeccCC
Q 045494 403 YREINNILAIGGP--AR-SGEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 403 greI~NiVAcEG~--~R-~rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
-.+.....+. .. ...-+.+.|+..|.. |||+.+.+.
T Consensus 169 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-aGf~~~~~~ 207 (227)
T 3e8s_A 169 ---EESFAGFAGDWQPMPWYFRTLASWLNALDM-AGLRLVSLQ 207 (227)
T ss_dssp ---EECCTTSSSCCCCEEEEECCHHHHHHHHHH-TTEEEEEEE
T ss_pred ---hhhhhccccCcccceEEEecHHHHHHHHHH-cCCeEEEEe
Confidence 0000000111 01 122367899999999 999988664
No 51
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=88.17 E-value=0.91 Score=41.06 Aligned_cols=133 Identities=19% Similarity=0.228 Sum_probs=75.1
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
.-.|+|+|.+.|. +...|+.+ | .++|||+.+...++.+.+++ ++.|.- .+..++.
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~~~~~~a~~~~-------~~~~~~----~d~~~~~----- 98 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA--G---FDVDATDGSPELAAEASRRL-------GRPVRT----MLFHQLD----- 98 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHHH-------TSCCEE----CCGGGCC-----
T ss_pred CCcEEEECCCCCH----HHHHHHHc--C---CeEEEECCCHHHHHHHHHhc-------CCceEE----eeeccCC-----
Confidence 4479999999886 45556655 2 48999999887776665554 444322 2222222
Q ss_pred ccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCc
Q 045494 341 LRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVEQEISHGGDDPNRHRVEHCLLYREINNILAIGGPAR 417 (492)
Q Consensus 341 l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvEqea~hnsd~~eR~~iE~~~lgreI~NiVAcEG~~R 417 (492)
.++ +.|+++..+|.+.. .....+|+.+ +.|+|.-++++....... ..+ +...+
T Consensus 99 -~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~------------------~~~~~ 154 (211)
T 3e23_A 99 -AIDAYDAVWAHACLLHVPR--DELADVLKLIWRALKPGGLFYASYKSGEG---EGR------------------DKLAR 154 (211)
T ss_dssp -CCSCEEEEEECSCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEECCSS---CEE------------------CTTSC
T ss_pred -CCCcEEEEEecCchhhcCH--HHHHHHHHHHHHhcCCCcEEEEEEcCCCc---ccc------------------cccch
Confidence 112 23444444444321 1234566554 678998777664222111 000 11112
Q ss_pred -ccccchhhHHHHHhccCC-CeeccCCh
Q 045494 418 -SGEDKFKHWRSELARCNG-FAQVPMSG 443 (492)
Q Consensus 418 -~rhE~~~~Wr~rm~~~AG-F~~v~lS~ 443 (492)
.+.-+.+.|+..+.. +| |+.+....
T Consensus 155 ~~~~~~~~~~~~~l~~-aG~f~~~~~~~ 181 (211)
T 3e23_A 155 YYNYPSEEWLRARYAE-AGTWASVAVES 181 (211)
T ss_dssp EECCCCHHHHHHHHHH-HCCCSEEEEEE
T ss_pred hccCCCHHHHHHHHHh-CCCcEEEEEEe
Confidence 223466889999999 99 99887743
No 52
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=88.13 E-value=2.5 Score=39.31 Aligned_cols=110 Identities=13% Similarity=0.120 Sum_probs=64.3
Q ss_pred hhHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeee
Q 045494 248 SNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPI 327 (492)
Q Consensus 248 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V 327 (492)
.-+.|++.+...+.-.|+|+|.+.|. +...|+.+ |+. ++|||+.+...++.+.+++. +-..+|..
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~~--~v~~vD~s~~~~~~a~~~~~------~~~~~~~~- 96 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GAK--KVLGIDLSERMLTEAKRKTT------SPVVCYEQ- 96 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEESCHHHHHHHHHHCC------CTTEEEEE-
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CCC--EEEEEECCHHHHHHHHHhhc------cCCeEEEE-
Confidence 34456666665567789999999984 45556655 322 89999998776665544433 22344432
Q ss_pred cccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 328 AKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
.+.+++. ..++ +.|+++..+|.+. ....+|+.+ +-|+|.-.+++.
T Consensus 97 -~d~~~~~-----~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 97 -KAIEDIA-----IEPDAYNVVLSSLALHYIA----SFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp -CCGGGCC-----CCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred -cchhhCC-----CCCCCeEEEEEchhhhhhh----hHHHHHHHHHHHcCCCcEEEEE
Confidence 2233322 2222 2344454555442 245666655 669998777764
No 53
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=87.91 E-value=4 Score=39.46 Aligned_cols=104 Identities=14% Similarity=0.108 Sum_probs=57.9
Q ss_pred eEEEEccccC---ccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccc--
Q 045494 262 VHIIDLDIMQ---GLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDA-- 336 (492)
Q Consensus 262 VHIIDfgI~~---G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~-- 336 (492)
-+|+|+|.|. |. ...+++. +. |..|+|+|+.+...++...+++.. .-..+|. ..++.+...
T Consensus 79 ~~vLDlGcG~pt~G~-~~~~~~~---~~---p~~~v~~vD~sp~~l~~Ar~~~~~-----~~~v~~~--~~D~~~~~~~~ 144 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQN-THEVAQS---VN---PDARVVYVDIDPMVLTHGRALLAK-----DPNTAVF--TADVRDPEYIL 144 (274)
T ss_dssp CEEEEETCCSCCSSC-HHHHHHH---HC---TTCEEEEEESSHHHHHHHHHHHTT-----CTTEEEE--ECCTTCHHHHH
T ss_pred CEEEEECCCCCCCCh-HHHHHHH---hC---CCCEEEEEECChHHHHHHHHhcCC-----CCCeEEE--EeeCCCchhhh
Confidence 4899999999 73 3333332 21 347999999988877776666521 1124443 333332110
Q ss_pred ------ccccccCCCeEEEeeccccccCCCCccHHHHHHHHh-cCCcEEEEE
Q 045494 337 ------SMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEE-LSPRVVTLV 381 (492)
Q Consensus 337 ------~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~-L~Pkvvvlv 381 (492)
..+....-.+|..+..+|.+.+. ....+|+.+++ |+|.-.+++
T Consensus 145 ~~~~~~~~~d~~~~d~v~~~~vlh~~~d~--~~~~~l~~~~~~L~pGG~l~i 194 (274)
T 2qe6_A 145 NHPDVRRMIDFSRPAAIMLVGMLHYLSPD--VVDRVVGAYRDALAPGSYLFM 194 (274)
T ss_dssp HSHHHHHHCCTTSCCEEEETTTGGGSCTT--THHHHHHHHHHHSCTTCEEEE
T ss_pred ccchhhccCCCCCCEEEEEechhhhCCcH--HHHHHHHHHHHhCCCCcEEEE
Confidence 11221122345555567766544 35667777655 999755544
No 54
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=87.40 E-value=2 Score=42.69 Aligned_cols=156 Identities=16% Similarity=0.246 Sum_probs=80.2
Q ss_pred HHHhhh--ccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeec
Q 045494 251 AILEAF--HRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIA 328 (492)
Q Consensus 251 AILEA~--~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~ 328 (492)
.|++.+ .=...-+|+|+|.+.|.- ...|+.+. |.+++|+++.+ ..++. |+.+. .++|..
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~-~~~~~--------a~~~~-~v~~~~-- 242 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGV----TKLIHEIF---PHLKCTVFDQP-QVVGN--------LTGNE-NLNFVG-- 242 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHH----HHHHHHHC---TTSEEEEEECH-HHHSS--------CCCCS-SEEEEE--
T ss_pred HHHHhcchhccCCCEEEEECCCcCHH----HHHHHHHC---CCCeEEEeccH-HHHhh--------cccCC-CcEEEe--
Confidence 566665 112345899999999853 44444442 45799999873 43322 22211 134432
Q ss_pred ccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCC---c-EEEEEeecCCCCCCChHHHHHHHHHHH
Q 045494 329 KKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSP---R-VVTLVEQEISHGGDDPNRHRVEHCLLY 403 (492)
Q Consensus 329 ~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~P---k-vvvlvEqea~hnsd~~eR~~iE~~~lg 403 (492)
.+..+ .+. .-+++..+..+|.+.+. ....+|+.+ +.|+| . .++++|.-.......+.-... ...+
T Consensus 243 ~d~~~----~~~--~~D~v~~~~vlh~~~d~--~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~-~~~~- 312 (358)
T 1zg3_A 243 GDMFK----SIP--SADAVLLKWVLHDWNDE--QSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTEL-QLDY- 312 (358)
T ss_dssp CCTTT----CCC--CCSEEEEESCGGGSCHH--HHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHH-HHHH-
T ss_pred CccCC----CCC--CceEEEEcccccCCCHH--HHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhH-HHhh-
Confidence 22222 111 24566666666654331 123667665 66888 3 456666544332222210001 1111
Q ss_pred HHHHHHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 404 REINNILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 404 reI~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
.+.-.+...|..| +.+.|+..+.. |||+.+..
T Consensus 313 -d~~~~~~~~g~~~----t~~e~~~ll~~-aGf~~~~~ 344 (358)
T 1zg3_A 313 -DLVMLTMFLGKER----TKQEWEKLIYD-AGFSSYKI 344 (358)
T ss_dssp -HHHHHHHHSCCCE----EHHHHHHHHHH-TTCCEEEE
T ss_pred -CHHHhccCCCCCC----CHHHHHHHHHH-cCCCeeEE
Confidence 1111122345333 55899999999 99997765
No 55
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=86.40 E-value=1.5 Score=40.04 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=58.7
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASML 339 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l 339 (492)
+.-+|+|+|.+.|.- ...|+.+ | .++|||+.+...++.+.+++. ..++.++|. ..+..++..
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~--~---~~~~~~D~s~~~~~~a~~~~~----~~~~~~~~~--~~d~~~~~~--- 98 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK--F---KNTWAVDLSQEMLSEAENKFR----SQGLKPRLA--CQDISNLNI--- 98 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG--S---SEEEEECSCHHHHHHHHHHHH----HTTCCCEEE--CCCGGGCCC---
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC--C---CcEEEEECCHHHHHHHHHHHh----hcCCCeEEE--ecccccCCc---
Confidence 556899999999873 3344544 2 489999998887776666553 334444443 233333221
Q ss_pred cccCCCeEEEee-ccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 340 QLRRGETLAVHW-LQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 340 ~l~~gEaLaVn~-~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
. ..=+.|+++. .+|.+.+. .....+|+.+ +.|+|.-.++++
T Consensus 99 ~-~~fD~v~~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 99 N-RKFDLITCCLDSTNYIIDS-DDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp S-CCEEEEEECTTGGGGCCSH-HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred c-CCceEEEEcCccccccCCH-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 1113455554 55544221 1234566655 668998777764
No 56
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=85.71 E-value=2.6 Score=42.73 Aligned_cols=115 Identities=15% Similarity=0.162 Sum_probs=67.4
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
++|++...-.+.-.|+|+|.|.|. +...|+.+ |. -++|||+.+ ..++.+ .+.++..|++=....+..
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~----ls~~la~~--g~--~~V~gvD~s-~~~~~a----~~~~~~~~~~~~v~~~~~ 119 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGI----LAIWSAQA--GA--RKVYAVEAT-KMADHA----RALVKANNLDHIVEVIEG 119 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTH----HHHHHHHT--TC--SEEEEEESS-TTHHHH----HHHHHHTTCTTTEEEEES
T ss_pred HHHHhccccCCCCEEEEeccCcCH----HHHHHHhc--CC--CEEEEEccH-HHHHHH----HHHHHHcCCCCeEEEEEC
Confidence 344444444455689999999993 34445555 22 389999988 655444 334455676522233444
Q ss_pred cccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 330 KFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 330 ~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
+.+++... ..=+.|+.+++.|.+... ...+.+|+.+ +-|+|.-+++..
T Consensus 120 d~~~~~~~----~~~D~Iv~~~~~~~l~~e-~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 120 SVEDISLP----EKVDVIISEWMGYFLLRE-SMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CGGGCCCS----SCEEEEEECCCBTTBTTT-CTHHHHHHHHHHHEEEEEEEESS
T ss_pred chhhcCcC----CcceEEEEcChhhcccch-HHHHHHHHHHHhhCCCCeEEEEe
Confidence 45544321 111345556655554332 3467788877 889999888764
No 57
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=85.69 E-value=8.1 Score=33.29 Aligned_cols=110 Identities=10% Similarity=-0.006 Sum_probs=61.5
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
..+++.+.-...-+|+|+|.+.|. +...|+.+. |..++||++.+...++.+.+++ +..|++-.+ .+..
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~---~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~-~~~~ 82 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGS----IAIEWLRST---PQTTAVCFEISEERRERILSNA----INLGVSDRI-AVQQ 82 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTH----HHHHHHTTS---SSEEEEEECSCHHHHHHHHHHH----HTTTCTTSE-EEEC
T ss_pred HHHHHHhcccCCCeEEEeCCCCCH----HHHHHHHHC---CCCeEEEEeCCHHHHHHHHHHH----HHhCCCCCE-EEec
Confidence 445666655566789999999873 444555553 4589999999887776665554 345665222 2222
Q ss_pred cccc-cccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 330 KFGD-IDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 330 ~~ee-l~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
+..+ +... -..=+.|.++..+|. ..+|+.+ +.|+|.-.+++.
T Consensus 83 d~~~~~~~~---~~~~D~i~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 83 GAPRAFDDV---PDNPDVIFIGGGLTA--------PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp CTTGGGGGC---CSCCSEEEECC-TTC--------TTHHHHHHHTCCTTCEEEEE
T ss_pred chHhhhhcc---CCCCCEEEECCcccH--------HHHHHHHHHhcCCCCEEEEE
Confidence 2211 2110 012235555543332 3355444 668997666543
No 58
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=85.49 E-value=0.7 Score=44.08 Aligned_cols=120 Identities=13% Similarity=0.158 Sum_probs=62.9
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEeeec
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHPIA 328 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~V~ 328 (492)
..|++.+.....-+|+|+|.|.|. +...|+.+ |+ ++|||+.+...++.+.+++.+.....+. .+.|. .
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~--~ 115 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIE--E 115 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEE--E
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEe--e
Confidence 445555554556789999999986 33445555 32 9999999988887776665332211111 22222 2
Q ss_pred ccccccccccccccCC--CeEEEe-eccccccCC---CCccHHHHHHH-HhcCCcEEEEEe
Q 045494 329 KKFGDIDASMLQLRRG--ETLAVH-WLQHSLYDA---TGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 329 ~~~eel~~~~l~l~~g--EaLaVn-~~lh~L~~~---~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
.+..++..+ + ..++ ++|.++ ..+|.+.+. ......+|+.+ +.|+|.-.+++.
T Consensus 116 ~d~~~~~~~-~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 116 ANWLTLDKD-V-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp CCGGGHHHH-S-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cChhhCccc-c-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 222222111 1 1122 234443 344444331 12245566655 678998766654
No 59
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=85.44 E-value=3.1 Score=38.17 Aligned_cols=107 Identities=16% Similarity=0.116 Sum_probs=56.8
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeecccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIAKKFGDIDAS 337 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~~~~eel~~~ 337 (492)
+.-+|+|+|.+.|.-=.. ||.+. ++.-++|+|+.+...++.+.+++. ..|+. ++|. ..+..+.-+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~----la~~~--~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~v~~~--~~d~~~~l~~ 125 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVR----MARLL--QPGARLLTMEINPDCAAITQQMLN----FAGLQDKVTIL--NGASQDLIPQ 125 (221)
T ss_dssp CCSEEEEECCTTSHHHHH----HHTTS--CTTCEEEEEESCHHHHHHHHHHHH----HHTCGGGEEEE--ESCHHHHGGG
T ss_pred CCCEEEEECCCCCHHHHH----HHHhC--CCCCEEEEEeCChHHHHHHHHHHH----HcCCCCceEEE--ECCHHHHHHH
Confidence 334799999998863322 33321 234699999998877766555443 45653 4553 2332221110
Q ss_pred ---cccccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEe
Q 045494 338 ---MLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVE 382 (492)
Q Consensus 338 ---~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvE 382 (492)
.....+=+.|.++...+... +...++..++-|+|.-+++++
T Consensus 126 ~~~~~~~~~fD~V~~d~~~~~~~----~~~~~~~~~~~LkpgG~lv~~ 169 (221)
T 3u81_A 126 LKKKYDVDTLDMVFLDHWKDRYL----PDTLLLEKCGLLRKGTVLLAD 169 (221)
T ss_dssp TTTTSCCCCCSEEEECSCGGGHH----HHHHHHHHTTCCCTTCEEEES
T ss_pred HHHhcCCCceEEEEEcCCcccch----HHHHHHHhccccCCCeEEEEe
Confidence 00001113455553222211 122455555889999988875
No 60
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=85.37 E-value=2.1 Score=42.68 Aligned_cols=110 Identities=8% Similarity=-0.005 Sum_probs=67.2
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccc
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKK 330 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~ 330 (492)
+|++.+.. --.|+|+|.|.|.= --.++ ..+|..++++++-+...++-+.+ ++..+|+++.|...
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~GpL----Al~~~---~~~p~a~y~a~DId~~~le~a~~----~l~~~g~~~~~~v~--- 188 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNPL----AAPWM---GLPAETVYIASDIDARLVGFVDE----ALTRLNVPHRTNVA--- 188 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGGG----CCTTT---TCCTTCEEEEEESBHHHHHHHHH----HHHHTTCCEEEEEC---
T ss_pred HHHhccCC--CceeeeeccCccHH----HHHHH---hhCCCCEEEEEeCCHHHHHHHHH----HHHhcCCCceEEEe---
Confidence 45555533 33789999987742 11111 13477999999988776655544 45667999877532
Q ss_pred ccccccccccccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEE
Q 045494 331 FGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLV 381 (492)
Q Consensus 331 ~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~Pkvvvlv 381 (492)
|+....+ -.+.+++.++-.+|.|.+. .....++.+..|+|..+++.
T Consensus 189 --D~~~~~p-~~~~DvaL~lkti~~Le~q--~kg~g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 189 --DLLEDRL-DEPADVTLLLKTLPCLETQ--QRGSGWEVIDIVNSPNIVVT 234 (281)
T ss_dssp --CTTTSCC-CSCCSEEEETTCHHHHHHH--STTHHHHHHHHSSCSEEEEE
T ss_pred --eecccCC-CCCcchHHHHHHHHHhhhh--hhHHHHHHHHHhCCCCEEEe
Confidence 2111111 1134455566667776543 23355699999999998886
No 61
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=85.24 E-value=4.2 Score=36.16 Aligned_cols=110 Identities=12% Similarity=0.006 Sum_probs=61.8
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEeeeccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHPIAKKFGDIDASM 338 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~V~~~~eel~~~~ 338 (492)
+.-.|+|+|.+.|.- ...++.+. .-++|||+.+.+.++.+.+++ +..|+ ..+| +..+..++...
T Consensus 44 ~~~~vLDlgcG~G~~----~~~~~~~~----~~~v~~vD~~~~~~~~a~~~~----~~~~~~~v~~--~~~d~~~~~~~- 108 (189)
T 3p9n_A 44 TGLAVLDLYAGSGAL----GLEALSRG----AASVLFVESDQRSAAVIARNI----EALGLSGATL--RRGAVAAVVAA- 108 (189)
T ss_dssp TTCEEEEETCTTCHH----HHHHHHTT----CSEEEEEECCHHHHHHHHHHH----HHHTCSCEEE--EESCHHHHHHH-
T ss_pred CCCEEEEeCCCcCHH----HHHHHHCC----CCeEEEEECCHHHHHHHHHHH----HHcCCCceEE--EEccHHHHHhh-
Confidence 344799999998842 22233342 248999999887776665554 34455 2444 33333332110
Q ss_pred ccccCCCeEEEeeccccccCCCCccHHHHHHHHh---cCCcEEEEEeecCCC
Q 045494 339 LQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEE---LSPRVVTLVEQEISH 387 (492)
Q Consensus 339 l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~---L~PkvvvlvEqea~h 387 (492)
+.-..=+.|++|...|... .....++..+.+ |+|.-+++++.+...
T Consensus 109 ~~~~~fD~i~~~~p~~~~~---~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 109 GTTSPVDLVLADPPYNVDS---ADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp CCSSCCSEEEECCCTTSCH---HHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred ccCCCccEEEECCCCCcch---hhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 1011123566665443311 124567777765 999999998876543
No 62
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=85.18 E-value=2.4 Score=44.69 Aligned_cols=121 Identities=10% Similarity=0.033 Sum_probs=68.9
Q ss_pred hHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH---HHHHhCCc-eEE
Q 045494 249 NQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFN---FAKRLGLS-FEF 324 (492)
Q Consensus 249 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~---fA~slgvp-FeF 324 (492)
-..|++.+.-...=+|+|+|.|.|. +.-.+|.+.+ .-+++||+.+.+.++-+.+++.+ .++..|+. -.+
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rV 234 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEY 234 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence 4556666654555679999999885 2233443332 23799999987766555554443 45667762 233
Q ss_pred eeecccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEE
Q 045494 325 HPIAKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLV 381 (492)
Q Consensus 325 ~~V~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~Pkvvvlv 381 (492)
..+..++.++.... .+..-.+|.+|..++ .+.....+....|.|+|--.+++
T Consensus 235 efi~GD~~~lp~~d-~~~~aDVVf~Nn~~F----~pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 235 TLERGDFLSEEWRE-RIANTSVIFVNNFAF----GPEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp EEEECCTTSHHHHH-HHHTCSEEEECCTTC----CHHHHHHHHHHHTTSCTTCEEEE
T ss_pred EEEECcccCCcccc-ccCCccEEEEccccc----CchHHHHHHHHHHcCCCCcEEEE
Confidence 33445554433211 011224666775443 12234455567789999877766
No 63
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=85.01 E-value=4.2 Score=37.18 Aligned_cols=141 Identities=11% Similarity=0.108 Sum_probs=71.9
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASML 339 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l 339 (492)
+.-.|+|+|.+.|. +...|+.+ | .++|||+.+...++.+.++. .+..++|. ..+..++.
T Consensus 53 ~~~~vLDiG~G~G~----~~~~l~~~--~---~~v~~vD~s~~~~~~a~~~~------~~~~~~~~--~~d~~~~~---- 111 (242)
T 3l8d_A 53 KEAEVLDVGCGDGY----GTYKLSRT--G---YKAVGVDISEVMIQKGKERG------EGPDLSFI--KGDLSSLP---- 111 (242)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCHHHHHHHHTTT------CBTTEEEE--ECBTTBCS----
T ss_pred CCCeEEEEcCCCCH----HHHHHHHc--C---CeEEEEECCHHHHHHHHhhc------ccCCceEE--EcchhcCC----
Confidence 34489999999885 44556655 2 38999998877665544431 12233443 22333322
Q ss_pred cccCC--CeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHhhcCCC
Q 045494 340 QLRRG--ETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVEQEISHGGDDPNRHRVEHCLLYREINNILAIGGPA 416 (492)
Q Consensus 340 ~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvEqea~hnsd~~eR~~iE~~~lgreI~NiVAcEG~~ 416 (492)
..++ +.|+++..+|.+ +. ...+|+ ..+.|+|.-.+++..-... ....... .... -+..
T Consensus 112 -~~~~~fD~v~~~~~l~~~---~~-~~~~l~~~~~~L~pgG~l~i~~~~~~--~~~~~~~---------~~~~---~~~~ 172 (242)
T 3l8d_A 112 -FENEQFEAIMAINSLEWT---EE-PLRALNEIKRVLKSDGYACIAILGPT--AKPRENS---------YPRL---YGKD 172 (242)
T ss_dssp -SCTTCEEEEEEESCTTSS---SC-HHHHHHHHHHHEEEEEEEEEEEECTT--CGGGGGG---------GGGG---GTCC
T ss_pred -CCCCCccEEEEcChHhhc---cC-HHHHHHHHHHHhCCCeEEEEEEcCCc--chhhhhh---------hhhh---cccc
Confidence 2122 234344344443 22 334554 5578899876665431111 0111000 0000 1111
Q ss_pred c-ccccchhhHHHHHhccCCCeeccC
Q 045494 417 R-SGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 417 R-~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
. ...-+...|+..+.. +||+.+..
T Consensus 173 ~~~~~~~~~~~~~~l~~-~Gf~~~~~ 197 (242)
T 3l8d_A 173 VVCNTMMPWEFEQLVKE-QGFKVVDG 197 (242)
T ss_dssp CSSCCCCHHHHHHHHHH-TTEEEEEE
T ss_pred ccccCCCHHHHHHHHHH-cCCEEEEe
Confidence 1 222345678888999 99997764
No 64
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=84.99 E-value=5.9 Score=36.04 Aligned_cols=133 Identities=10% Similarity=0.011 Sum_probs=69.8
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
.-.|+|+|.+.|.- ...|+.+ ||++.+...++.+.++ ++. |. ..+.+++.
T Consensus 48 ~~~vLDiG~G~G~~----~~~l~~~---------~~vD~s~~~~~~a~~~--------~~~--~~--~~d~~~~~----- 97 (219)
T 1vlm_A 48 EGRGVEIGVGTGRF----AVPLKIK---------IGVEPSERMAEIARKR--------GVF--VL--KGTAENLP----- 97 (219)
T ss_dssp SSCEEEETCTTSTT----HHHHTCC---------EEEESCHHHHHHHHHT--------TCE--EE--ECBTTBCC-----
T ss_pred CCcEEEeCCCCCHH----HHHHHHH---------hccCCCHHHHHHHHhc--------CCE--EE--EcccccCC-----
Confidence 34799999998863 3345544 9999887666544433 433 32 22333322
Q ss_pred ccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE-eecCCCCCCChHHHHHHHHHHHHHHHHHHhhcCCC
Q 045494 341 LRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV-EQEISHGGDDPNRHRVEHCLLYREINNILAIGGPA 416 (492)
Q Consensus 341 l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv-Eqea~hnsd~~eR~~iE~~~lgreI~NiVAcEG~~ 416 (492)
..++ +.|+++..+|.+. . ...+|+.+ +.|+|.-.+++ +... ++....... .. ..+..
T Consensus 98 ~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~L~pgG~l~i~~~~~----~~~~~~~~~---------~~--~~~~~ 158 (219)
T 1vlm_A 98 LKDESFDFALMVTTICFVD---D-PERALKEAYRILKKGGYLIVGIVDR----ESFLGREYE---------KN--KEKSV 158 (219)
T ss_dssp SCTTCEEEEEEESCGGGSS---C-HHHHHHHHHHHEEEEEEEEEEEECS----SSHHHHHHH---------HT--TTC-C
T ss_pred CCCCCeeEEEEcchHhhcc---C-HHHHHHHHHHHcCCCcEEEEEEeCC----ccHHHHHHH---------HH--hcCcc
Confidence 2222 2344444444432 2 34566544 77899866555 3322 222111111 11 11211
Q ss_pred --c-ccccchhhHHHHHhccCCCeeccCCh
Q 045494 417 --R-SGEDKFKHWRSELARCNGFAQVPMSG 443 (492)
Q Consensus 417 --R-~rhE~~~~Wr~rm~~~AGF~~v~lS~ 443 (492)
+ .+.-+.+.|+..|.. +||+.+.+..
T Consensus 159 ~~~~~~~~~~~~l~~~l~~-~Gf~~~~~~~ 187 (219)
T 1vlm_A 159 FYKNARFFSTEELMDLMRK-AGFEEFKVVQ 187 (219)
T ss_dssp CSTTCCCCCHHHHHHHHHH-TTCEEEEEEE
T ss_pred hhcccccCCHHHHHHHHHH-CCCeEEEEec
Confidence 1 222466889999999 9999877643
No 65
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=84.47 E-value=3.2 Score=41.59 Aligned_cols=157 Identities=15% Similarity=0.226 Sum_probs=79.9
Q ss_pred HHHHhhhc-cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeec
Q 045494 250 QAILEAFH-RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIA 328 (492)
Q Consensus 250 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~ 328 (492)
..|++.+. -.+.-+|+|+|.+.|.- ...|+.+. |.+++|+++. ...++. |+... ..+|..
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---~~~~~~~~D~-~~~~~~--------a~~~~-~v~~~~-- 258 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRN----LELIISKY---PLIKGINFDL-PQVIEN--------APPLS-GIEHVG-- 258 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEEC-HHHHTT--------CCCCT-TEEEEE--
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHH----HHHHHHHC---CCCeEEEeCh-HHHHHh--------hhhcC-CCEEEe--
Confidence 56777764 23457899999998863 44455442 4579999987 443432 22211 134432
Q ss_pred ccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEE-EeecCCCCCCChHHHHHHHHHHHHHH
Q 045494 329 KKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTL-VEQEISHGGDDPNRHRVEHCLLYREI 406 (492)
Q Consensus 329 ~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvl-vEqea~hnsd~~eR~~iE~~~lgreI 406 (492)
.+..+ . +. ..+++.++..+|.+.+. ....+|+.+ +.|+|.-.++ +|.-.......+. .|+......+
T Consensus 259 ~d~~~-~---~~--~~D~v~~~~~lh~~~d~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~d~ 327 (372)
T 1fp1_D 259 GDMFA-S---VP--QGDAMILKAVCHNWSDE--KCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSE---ESKLVSTLDN 327 (372)
T ss_dssp CCTTT-C---CC--CEEEEEEESSGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSH---HHHHHHHHHH
T ss_pred CCccc-C---CC--CCCEEEEecccccCCHH--HHHHHHHHHHHhcCCCCEEEEEEeccCCCCccch---HHHHHHHhhH
Confidence 22222 1 11 12455555556654321 123667655 6689976544 4544332222211 1110111111
Q ss_pred HHHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 407 NNILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 407 ~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
.-.+...|..| +.+.|+..|.. |||+.+..
T Consensus 328 ~~~~~~~~~~~----t~~e~~~ll~~-aGf~~~~~ 357 (372)
T 1fp1_D 328 LMFITVGGRER----TEKQYEKLSKL-SGFSKFQV 357 (372)
T ss_dssp HHHHHHSCCCE----EHHHHHHHHHH-TTCSEEEE
T ss_pred HHHhccCCccC----CHHHHHHHHHH-CCCceEEE
Confidence 11112335333 55789999999 99997765
No 66
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=84.15 E-value=3.4 Score=38.20 Aligned_cols=110 Identities=19% Similarity=0.226 Sum_probs=60.7
Q ss_pred HhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccc
Q 045494 253 LEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFG 332 (492)
Q Consensus 253 LEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~e 332 (492)
++.....+.-+|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.+++. ..++.++|. ..+..
T Consensus 34 ~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~l~~a~~~~~----~~~~~v~~~--~~d~~ 98 (252)
T 1wzn_A 34 FKEDAKREVRRVLDLACGTGI----PTLELAER--G---YEVVGLDLHEEMLRVARRKAK----ERNLKIEFL--QGDVL 98 (252)
T ss_dssp HHHTCSSCCCEEEEETCTTCH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHHHH----HTTCCCEEE--ESCGG
T ss_pred HHHhcccCCCEEEEeCCCCCH----HHHHHHHC--C---CeEEEEECCHHHHHHHHHHHH----hcCCceEEE--ECChh
Confidence 333333445689999999985 34445554 2 489999999887776666543 345555553 23333
Q ss_pred ccccccccccCCCeEEEee-ccccccCCCCccHHHHHHH-HhcCCcEEEEEee
Q 045494 333 DIDASMLQLRRGETLAVHW-LQHSLYDATGPDWKTLRLL-EELSPRVVTLVEQ 383 (492)
Q Consensus 333 el~~~~l~l~~gEaLaVn~-~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvEq 383 (492)
++... ..=+.|++++ .++.+ . ......+|+.+ +.|+|.-+++++-
T Consensus 99 ~~~~~----~~fD~v~~~~~~~~~~-~-~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 99 EIAFK----NEFDAVTMFFSTIMYF-D-EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GCCCC----SCEEEEEECSSGGGGS-C-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcccC----CCccEEEEcCCchhcC-C-HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 32211 0112333332 22222 1 11244566554 6799998888764
No 67
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=84.00 E-value=6.6 Score=34.46 Aligned_cols=110 Identities=11% Similarity=0.043 Sum_probs=63.0
Q ss_pred hHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEeee
Q 045494 249 NQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHPI 327 (492)
Q Consensus 249 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~V 327 (492)
++.+++.+...+.-+|+|+|.+.|. +...|+.+ + .++|||+.+...++.+.+++. ..++ .++|.
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~~-- 85 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKNAMSIANVERIKS----IENLDNLHTR-- 85 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHH----HHTCTTEEEE--
T ss_pred cHHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECCHHHHHHHHHHHH----hCCCCCcEEE--
Confidence 4466676665455599999999886 34455555 2 389999998777766555443 3454 34443
Q ss_pred cccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE
Q 045494 328 AKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
..+..++. . ++ +.|+.+..+|.+. ......+|+.+ +.|+|.-.+++
T Consensus 86 ~~d~~~~~-----~-~~~~D~v~~~~~l~~~~--~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 86 VVDLNNLT-----F-DRQYDFILSTVVLMFLE--AKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp ECCGGGCC-----C-CCCEEEEEEESCGGGSC--GGGHHHHHHHHHHTEEEEEEEEE
T ss_pred EcchhhCC-----C-CCCceEEEEcchhhhCC--HHHHHHHHHHHHHhcCCCeEEEE
Confidence 22333322 1 22 3344454444432 11245566554 77899876443
No 68
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=83.72 E-value=1.5 Score=39.93 Aligned_cols=116 Identities=15% Similarity=0.070 Sum_probs=64.6
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEeeecc
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHPIAK 329 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~V~~ 329 (492)
..++.+.-...-+|+|+|.|.|.-= ..|+.+. |..++|||+.+...++.+.++..+-++..++ .++| +..
T Consensus 18 ~~~~~l~~~~~~~vLDiGcG~G~~~----~~la~~~---p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~--~~~ 88 (218)
T 3mq2_A 18 AEFEQLRSQYDDVVLDVGTGDGKHP----YKVARQN---PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLY--LWA 88 (218)
T ss_dssp HHHHHHHTTSSEEEEEESCTTCHHH----HHHHHHC---TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEE--EEC
T ss_pred HHHHHhhccCCCEEEEecCCCCHHH----HHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEE--Eec
Confidence 4455555566678999999988533 3344432 4579999999877676555544444445565 3454 333
Q ss_pred cccccccccccccCCCeEEEee---cc--ccccCCCCccHHHHHH-HHhcCCcEEEEEee
Q 045494 330 KFGDIDASMLQLRRGETLAVHW---LQ--HSLYDATGPDWKTLRL-LEELSPRVVTLVEQ 383 (492)
Q Consensus 330 ~~eel~~~~l~l~~gEaLaVn~---~l--h~L~~~~~~~~~~L~~-Ir~L~PkvvvlvEq 383 (492)
+.+++... -.. +.+.+.+ .. |.+.+ + ..+|+. .+-|+|.-.+++.-
T Consensus 89 d~~~l~~~---~~~-d~v~~~~~~~~~~~~~~~~---~-~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 89 TAERLPPL---SGV-GELHVLMPWGSLLRGVLGS---S-PEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp CSTTCCSC---CCE-EEEEEESCCHHHHHHHHTS---S-SHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhCCCC---CCC-CEEEEEccchhhhhhhhcc---H-HHHHHHHHHHcCCCcEEEEEe
Confidence 44443221 111 3333332 11 22222 2 345554 47799998887743
No 69
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=83.65 E-value=4.7 Score=36.96 Aligned_cols=136 Identities=14% Similarity=0.078 Sum_probs=73.7
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccccccc
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQL 341 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~l 341 (492)
-.|+|+|.|.|. +...|+. +..++|||+.+...++.+.+++.+.- ..-.++|. ..+..++.+..
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~--~~d~~~~~~~~--- 131 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDISESALAKANETYGSSP--KAEYFSFV--KEDVFTWRPTE--- 131 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSCHHHHHHHHHHHTTSG--GGGGEEEE--CCCTTTCCCSS---
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECCHHHHHHHHHHhhccC--CCcceEEE--ECchhcCCCCC---
Confidence 499999999884 3334554 23689999998877776665543311 11123442 23333322211
Q ss_pred cCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE-eecCCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 045494 342 RRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV-EQEISHGGDDPNRHRVEHCLLYREINNILAIGGPARSG 419 (492)
Q Consensus 342 ~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv-Eqea~hnsd~~eR~~iE~~~lgreI~NiVAcEG~~R~r 419 (492)
.=+.|+.+..+|.+. ......+|+.+ +.|+|.-.+++ +...... ..|.. .
T Consensus 132 -~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----------------------~~~~~--~ 183 (235)
T 3lcc_A 132 -LFDLIFDYVFFCAIE--PEMRPAWAKSMYELLKPDGELITLMYPITDH-----------------------VGGPP--Y 183 (235)
T ss_dssp -CEEEEEEESSTTTSC--GGGHHHHHHHHHHHEEEEEEEEEEECCCSCC-----------------------CSCSS--C
T ss_pred -CeeEEEEChhhhcCC--HHHHHHHHHHHHHHCCCCcEEEEEEeccccc-----------------------CCCCC--c
Confidence 112344444455442 12355677666 55999877765 2221110 01111 1
Q ss_pred ccchhhHHHHHhccCCCeeccCC
Q 045494 420 EDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 420 hE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
.-+.+.|+..|.. +||+.+.+.
T Consensus 184 ~~~~~~~~~~l~~-~Gf~~~~~~ 205 (235)
T 3lcc_A 184 KVDVSTFEEVLVP-IGFKAVSVE 205 (235)
T ss_dssp CCCHHHHHHHHGG-GTEEEEEEE
T ss_pred cCCHHHHHHHHHH-cCCeEEEEE
Confidence 1345778888888 999877653
No 70
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=83.55 E-value=3.3 Score=40.17 Aligned_cols=115 Identities=11% Similarity=0.067 Sum_probs=61.4
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhC--CceEEeeeccccccccc-
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLG--LSFEFHPIAKKFGDIDA- 336 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slg--vpFeF~~V~~~~eel~~- 336 (492)
+.-+|+|+|.+.|.- ...|+.++ .-++|||+.+...++.+.+++.......+ .......+..+.+++..
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 105 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI 105 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCST
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchh
Confidence 556899999998873 33344432 35899999998888777776654321100 11122333344444321
Q ss_pred ccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 337 SMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 337 ~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
..+.-.++ +.|++++.+|.+.........+|+.+ +.|+|.-++++.
T Consensus 106 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 106 DKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp TTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 01111111 34555655665422212234666655 678998777653
No 71
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=83.47 E-value=3.9 Score=39.23 Aligned_cols=109 Identities=13% Similarity=0.039 Sum_probs=60.0
Q ss_pred CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccc
Q 045494 259 RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASM 338 (492)
Q Consensus 259 ~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~ 338 (492)
.+.-+|+|+|.|.|. +...|+.+. ++..++|||+.+...++.+.+++... ....-..+|. ..+.+++....
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~v~~~--~~d~~~~~~~~ 105 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDLSATMIKTAEVIKEGS-PDTYKNVSFK--ISSSDDFKFLG 105 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEESCHHHHHHHHHHHHHC-C-CCTTEEEE--ECCTTCCGGGC
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHHHHhc-cCCCCceEEE--EcCHHhCCccc
Confidence 456789999999884 344444321 13469999999988777666555432 0112244453 33444433211
Q ss_pred -ccccCC--CeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEE
Q 045494 339 -LQLRRG--ETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLV 381 (492)
Q Consensus 339 -l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~Pkvvvlv 381 (492)
..+.++ +.|.++..+|.+ + ...+|+ ..+.|+|.-.+++
T Consensus 106 ~~~~~~~~fD~V~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 106 ADSVDKQKIDMITAVECAHWF-D----FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTTTTSSCEEEEEEESCGGGS-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred cccccCCCeeEEeHhhHHHHh-C----HHHHHHHHHHhcCCCcEEEE
Confidence 011112 234455555555 2 445555 4477899877655
No 72
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=82.97 E-value=3.3 Score=40.63 Aligned_cols=101 Identities=14% Similarity=0.054 Sum_probs=63.4
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
--.|+|+|.|.|.- +++.+ |..+++|++-+...++ .+.+++...|+++.|...-. ....+.
T Consensus 106 p~~VLDlGCG~gpL------al~~~----~~~~y~a~DId~~~i~----~ar~~~~~~g~~~~~~v~D~-----~~~~~~ 166 (253)
T 3frh_A 106 PRRVLDIACGLNPL------ALYER----GIASVWGCDIHQGLGD----VITPFAREKDWDFTFALQDV-----LCAPPA 166 (253)
T ss_dssp CSEEEEETCTTTHH------HHHHT----TCSEEEEEESBHHHHH----HHHHHHHHTTCEEEEEECCT-----TTSCCC
T ss_pred CCeEEEecCCccHH------HHHhc----cCCeEEEEeCCHHHHH----HHHHHHHhcCCCceEEEeec-----ccCCCC
Confidence 34899999987731 11112 6689999998876554 44555677799988864321 111111
Q ss_pred ccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEee
Q 045494 341 LRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVEQ 383 (492)
Q Consensus 341 l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvEq 383 (492)
- +.+++.++-.+|.|-+.. ....++.+..|+|..||+.=+
T Consensus 167 ~-~~DvvLllk~lh~LE~q~--~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 167 E-AGDLALIFKLLPLLEREQ--AGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp C-BCSEEEEESCHHHHHHHS--TTHHHHHHHHCBCSEEEEEEE
T ss_pred C-CcchHHHHHHHHHhhhhc--hhhHHHHHHHhcCCCEEEEcC
Confidence 1 345566676677775432 235568888999998887543
No 73
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=82.87 E-value=2.8 Score=38.71 Aligned_cols=136 Identities=12% Similarity=0.132 Sum_probs=68.1
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
.-+|+|+|.+.|. +...|+.+ | .++|||+.+...++.+.++ ++|. ..+..+.. . .
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~~~~a~~~-----------~~~~--~~d~~~~~-~--~ 96 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDINEDMIKFCEGK-----------FNVV--KSDAIEYL-K--S 96 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSCHHHHHHHHTT-----------SEEE--CSCHHHHH-H--T
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECCHHHHHHHHhh-----------ccee--eccHHHHh-h--h
Confidence 3579999998885 34455554 2 3689999987666544433 3332 22222210 0 1
Q ss_pred ccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHhhcCCCc
Q 045494 341 LRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVEQEISHGGDDPNRHRVEHCLLYREINNILAIGGPAR 417 (492)
Q Consensus 341 l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvEqea~hnsd~~eR~~iE~~~lgreI~NiVAcEG~~R 417 (492)
+.++ +.|+.+..+|.+.+ .....+|+.+ +.|+|.-.+++..-. ..... .+ .+.. .+...
T Consensus 97 ~~~~~fD~i~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~--~~---------~~~~--~~~~~ 158 (240)
T 3dli_A 97 LPDKYLDGVMISHFVEHLDP--ERLFELLSLCYSKMKYSSYIVIESPN---PTSLY--SL---------INFY--IDPTH 158 (240)
T ss_dssp SCTTCBSEEEEESCGGGSCG--GGHHHHHHHHHHHBCTTCCEEEEEEC---TTSHH--HH---------HHHT--TSTTC
T ss_pred cCCCCeeEEEECCchhhCCc--HHHHHHHHHHHHHcCCCcEEEEEeCC---cchhH--HH---------HHHh--cCccc
Confidence 1112 34544544544421 1235666655 779997555443211 11111 00 0101 11111
Q ss_pred ccccchhhHHHHHhccCCCeecc
Q 045494 418 SGEDKFKHWRSELARCNGFAQVP 440 (492)
Q Consensus 418 ~rhE~~~~Wr~rm~~~AGF~~v~ 440 (492)
...-+...|+..|.+ +||+.+.
T Consensus 159 ~~~~~~~~l~~~l~~-aGf~~~~ 180 (240)
T 3dli_A 159 KKPVHPETLKFILEY-LGFRDVK 180 (240)
T ss_dssp CSCCCHHHHHHHHHH-HTCEEEE
T ss_pred cccCCHHHHHHHHHH-CCCeEEE
Confidence 223345788888888 9998653
No 74
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=81.37 E-value=21 Score=31.69 Aligned_cols=99 Identities=15% Similarity=0.065 Sum_probs=56.5
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASML 339 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l 339 (492)
+.-.|+|+|.|.|. +...|+.+ |+ -++|||+.+...++.+.+++ +..|+..+| +..+..++..
T Consensus 49 ~~~~vlD~g~G~G~----~~~~l~~~--~~--~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~--~~~d~~~~~~--- 111 (207)
T 1wy7_A 49 EGKVVADLGAGTGV----LSYGALLL--GA--KEVICVEVDKEAVDVLIENL----GEFKGKFKV--FIGDVSEFNS--- 111 (207)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCHHHHHHHHHHT----GGGTTSEEE--EESCGGGCCC---
T ss_pred CcCEEEEeeCCCCH----HHHHHHHc--CC--CEEEEEECCHHHHHHHHHHH----HHcCCCEEE--EECchHHcCC---
Confidence 34589999999997 44445555 22 27999999877776555543 344554444 3344444321
Q ss_pred cccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEE
Q 045494 340 QLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTL 380 (492)
Q Consensus 340 ~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~Pkvvvl 380 (492)
.=+.|++|...|.... .....+|+.+.++--.++++
T Consensus 112 ---~~D~v~~~~p~~~~~~--~~~~~~l~~~~~~l~~~~~~ 147 (207)
T 1wy7_A 112 ---RVDIVIMNPPFGSQRK--HADRPFLLKAFEISDVVYSI 147 (207)
T ss_dssp ---CCSEEEECCCCSSSST--TTTHHHHHHHHHHCSEEEEE
T ss_pred ---CCCEEEEcCCCccccC--CchHHHHHHHHHhcCcEEEE
Confidence 2246777765444322 33456676665555334443
No 75
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=80.88 E-value=5.8 Score=39.22 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=61.8
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
.+|++...-.+.-+|+|+|.|.|. +...++.+ | .-+++||+.+ ..++.+. +.++..|+.=....+..
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~--g--~~~v~~vD~s-~~~~~a~----~~~~~~~~~~~i~~~~~ 94 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKH--G--AKHVIGVDMS-SIIEMAK----ELVELNGFSDKITLLRG 94 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSH----HHHHHHHT--C--CSEEEEEESS-THHHHHH----HHHHHTTCTTTEEEEES
T ss_pred HHHHhhHhhcCCCEEEEecCccHH----HHHHHHHC--C--CCEEEEEChH-HHHHHHH----HHHHHcCCCCCEEEEEC
Confidence 344444433344589999999995 33445554 2 2489999987 4454433 33444565322222444
Q ss_pred cccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE
Q 045494 330 KFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 330 ~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
+.+++... ...=+.|+.+++.+.+... ...+.+|..+ +-|+|.-.++.
T Consensus 95 d~~~~~~~---~~~~D~Ivs~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 95 KLEDVHLP---FPKVDIIISEWMGYFLLYE-SMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CTTTSCCS---SSCEEEEEECCCBTTBSTT-CCHHHHHHHHHHHEEEEEEEES
T ss_pred chhhccCC---CCcccEEEEeCchhhcccH-HHHHHHHHHHHhhcCCCeEEEE
Confidence 44443211 0111345555554444333 3355677655 78999988764
No 76
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=80.58 E-value=11 Score=32.28 Aligned_cols=105 Identities=9% Similarity=0.016 Sum_probs=60.7
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEeeec
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHPIA 328 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~V~ 328 (492)
..|++.+.-.+.-+|+|+|.+.|. +...|+. +..++|||+.+...++.+.+++ +..|+ .++|. .
T Consensus 25 ~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~~--~ 89 (183)
T 2yxd_A 25 AVSIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYLDGAIEVTKQNL----AKFNIKNCQII--K 89 (183)
T ss_dssp HHHHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECSHHHHHHHHHHH----HHTTCCSEEEE--E
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCCHHHHHHHHHHH----HHcCCCcEEEE--E
Confidence 345555554455689999999987 3344444 3469999999887776655554 34555 24442 2
Q ss_pred ccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEe
Q 045494 329 KKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVE 382 (492)
Q Consensus 329 ~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvE 382 (492)
.+..+. +.-..=+.|.++.. .....+|+.++++ |.-.+++.
T Consensus 90 ~d~~~~----~~~~~~D~i~~~~~--------~~~~~~l~~~~~~-~gG~l~~~ 130 (183)
T 2yxd_A 90 GRAEDV----LDKLEFNKAFIGGT--------KNIEKIIEILDKK-KINHIVAN 130 (183)
T ss_dssp SCHHHH----GGGCCCSEEEECSC--------SCHHHHHHHHHHT-TCCEEEEE
T ss_pred CCcccc----ccCCCCcEEEECCc--------ccHHHHHHHHhhC-CCCEEEEE
Confidence 333221 11011134444432 3357789999888 87555543
No 77
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=80.10 E-value=2.4 Score=42.03 Aligned_cols=140 Identities=17% Similarity=0.142 Sum_probs=76.5
Q ss_pred HHHHHHHhcCCccchhhhhhhHHHHhhhc----cC-ceeEEEEccccCcc--chHHHHHHHhcCCCCCCeEEEeecCCCH
Q 045494 229 CAFQVFNNVSPFIKFAHFTSNQAILEAFH----RR-DRVHIIDLDIMQGL--QWPALFHILATRNEGPPHLRMTGMGTSM 301 (492)
Q Consensus 229 ~A~~~f~e~sP~~kfa~ftANqAILEA~~----g~-~~VHIIDfgI~~G~--QWpsLiqaLA~R~gGPP~LRITgI~~~~ 301 (492)
.+-..+.+..|-+. ...-+|.+.+.-+. ++ ..=+|+|+|.+-|. .--.+.|.++ |..|||+|+.+.
T Consensus 43 ~~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~------P~arVv~VD~sp 115 (277)
T 3giw_A 43 EAGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA------PESRVVYVDNDP 115 (277)
T ss_dssp HHHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC------TTCEEEEEECCH
T ss_pred HHHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC------CCCEEEEEeCCh
Confidence 34455667778864 33447777766532 22 22379999998744 2223333332 457999999998
Q ss_pred HHHHHHHHHHHHHHHHhCCceEEeeecccccccc--------cccccccCCCeEEEeeccccccCCCCccHHHH-HHHHh
Q 045494 302 EVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDID--------ASMLQLRRGETLAVHWLQHSLYDATGPDWKTL-RLLEE 372 (492)
Q Consensus 302 ~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~--------~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L-~~Ir~ 372 (492)
..|.....+|... -.-..+| +..++.++. ...+.+..--+|..|..+|.+.+...+ ..+| +..+.
T Consensus 116 ~mLa~Ar~~l~~~---~~~~~~~--v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p-~~~l~~l~~~ 189 (277)
T 3giw_A 116 IVLTLSQGLLAST---PEGRTAY--VEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDA-VGIVRRLLEP 189 (277)
T ss_dssp HHHHTTHHHHCCC---SSSEEEE--EECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCH-HHHHHHHHTT
T ss_pred HHHHHHHHHhccC---CCCcEEE--EEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhH-HHHHHHHHHh
Confidence 8887766665421 0112444 333343321 111222111145567778877654333 3455 55677
Q ss_pred cCCcEEEEE
Q 045494 373 LSPRVVTLV 381 (492)
Q Consensus 373 L~Pkvvvlv 381 (492)
|.|--++++
T Consensus 190 L~PGG~Lvl 198 (277)
T 3giw_A 190 LPSGSYLAM 198 (277)
T ss_dssp SCTTCEEEE
T ss_pred CCCCcEEEE
Confidence 888754443
No 78
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=79.93 E-value=5 Score=40.13 Aligned_cols=101 Identities=16% Similarity=0.207 Sum_probs=60.6
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeeccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIAKKFGDIDASM 338 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~~~~eel~~~~ 338 (492)
.-.|+|+|.|.|. +...|+.+ +.-+++||+.+ +.++.+. +.++..|++ .+| +..+.+++.
T Consensus 67 ~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s-~~l~~a~----~~~~~~~~~~~v~~--~~~d~~~~~--- 128 (349)
T 3q7e_A 67 DKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECS-SISDYAV----KIVKANKLDHVVTI--IKGKVEEVE--- 128 (349)
T ss_dssp TCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECS-THHHHHH----HHHHHTTCTTTEEE--EESCTTTCC---
T ss_pred CCEEEEEeccchH----HHHHHHHC----CCCEEEEECcH-HHHHHHH----HHHHHcCCCCcEEE--EECcHHHcc---
Confidence 3469999999994 45556655 23599999988 4554433 344555665 444 334444442
Q ss_pred ccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 339 LQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 339 l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
+..+ +.|+.+++.+.+... ...+.+|+.+ |-|+|.-+++.+
T Consensus 129 --~~~~~fD~Iis~~~~~~l~~~-~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 129 --LPVEKVDIIISEWMGYCLFYE-SMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp --CSSSCEEEEEECCCBBTBTBT-CCHHHHHHHHHHHEEEEEEEESC
T ss_pred --CCCCceEEEEEccccccccCc-hhHHHHHHHHHHhCCCCCEEccc
Confidence 1112 245555554444333 3466787776 789999888744
No 79
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=79.85 E-value=5.1 Score=34.85 Aligned_cols=132 Identities=11% Similarity=0.067 Sum_probs=72.3
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
..+++.+-. +.-+|+|+|.+.|. +...|+.+ + .++|||+.+...++.+.+++. + .+| +..
T Consensus 37 ~~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~~~~~~~~a~~~~~------~--~~~--~~~ 96 (195)
T 3cgg_A 37 ARLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ--G---HDVLGTDLDPILIDYAKQDFP------E--ARW--VVG 96 (195)
T ss_dssp HHHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHHCT------T--SEE--EEC
T ss_pred HHHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC--C---CcEEEEcCCHHHHHHHHHhCC------C--CcE--EEc
Confidence 345555532 44589999999886 34445555 2 389999988776665555431 2 233 222
Q ss_pred cccccccccccccCC--CeEEEe-eccccccCCCCccHHHHHH-HHhcCCcEEEEEeecCCCCCCChHHHHHHHHHHHHH
Q 045494 330 KFGDIDASMLQLRRG--ETLAVH-WLQHSLYDATGPDWKTLRL-LEELSPRVVTLVEQEISHGGDDPNRHRVEHCLLYRE 405 (492)
Q Consensus 330 ~~eel~~~~l~l~~g--EaLaVn-~~lh~L~~~~~~~~~~L~~-Ir~L~PkvvvlvEqea~hnsd~~eR~~iE~~~lgre 405 (492)
+..++. +.++ +.|+++ ..+|.+.. .....+|+. .+.|+|.-.+++......
T Consensus 97 d~~~~~-----~~~~~~D~i~~~~~~~~~~~~--~~~~~~l~~~~~~l~~~G~l~~~~~~~~------------------ 151 (195)
T 3cgg_A 97 DLSVDQ-----ISETDFDLIVSAGNVMGFLAE--DGREPALANIHRALGADGRAVIGFGAGR------------------ 151 (195)
T ss_dssp CTTTSC-----CCCCCEEEEEECCCCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEETTS------------------
T ss_pred ccccCC-----CCCCceeEEEECCcHHhhcCh--HHHHHHHHHHHHHhCCCCEEEEEeCCCC------------------
Confidence 333321 2222 334444 23443311 123455554 477899877766432211
Q ss_pred HHHHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 406 INNILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 406 I~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
.-....|...+.. +||+.+.+
T Consensus 152 --------------~~~~~~~~~~l~~-~Gf~~~~~ 172 (195)
T 3cgg_A 152 --------------GWVFGDFLEVAER-VGLELENA 172 (195)
T ss_dssp --------------SCCHHHHHHHHHH-HTEEEEEE
T ss_pred --------------CcCHHHHHHHHHH-cCCEEeee
Confidence 1244678888888 88887765
No 80
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=79.74 E-value=1.8 Score=40.50 Aligned_cols=96 Identities=15% Similarity=0.122 Sum_probs=56.0
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
.-.|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.+++. ++ +| +..+..++..
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~~~~a~~~~~------~~--~~--~~~d~~~~~~---- 107 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--F---GTVEGLELSADMLAIARRRNP------DA--VL--HHGDMRDFSL---- 107 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--S---SEEEEEESCHHHHHHHHHHCT------TS--EE--EECCTTTCCC----
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--C---CeEEEEECCHHHHHHHHhhCC------CC--EE--EECChHHCCc----
Confidence 3579999999884 45566655 3 289999998777766555432 22 33 2233333221
Q ss_pred ccCC--CeEEEee-ccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 341 LRRG--ETLAVHW-LQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 341 l~~g--EaLaVn~-~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
++ ++|+++. .+|.+.+. .....+|+.+ +.|+|.-+++++
T Consensus 108 --~~~fD~v~~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 108 --GRRFSAVTCMFSSIGHLAGQ-AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp --SCCEEEEEECTTGGGGSCHH-HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred --cCCcCEEEEcCchhhhcCCH-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 22 3455554 55544321 1234556554 678999888886
No 81
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=79.04 E-value=8.7 Score=37.28 Aligned_cols=109 Identities=13% Similarity=0.001 Sum_probs=61.0
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeeccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIAKKFGDIDASM 338 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~~~~eel~~~~ 338 (492)
.-.|+|+|.|.|.-- -.|+.+ |..++|||+.+.+.++.+.+++ +..|+. ++|. ..++.+.....
T Consensus 124 ~~~vLDlG~GsG~~~----~~la~~----~~~~v~~vDis~~al~~A~~n~----~~~~l~~~v~~~--~~D~~~~~~~~ 189 (284)
T 1nv8_A 124 IKTVADIGTGSGAIG----VSVAKF----SDAIVFATDVSSKAVEIARKNA----ERHGVSDRFFVR--KGEFLEPFKEK 189 (284)
T ss_dssp CCEEEEESCTTSHHH----HHHHHH----SSCEEEEEESCHHHHHHHHHHH----HHTTCTTSEEEE--ESSTTGGGGGG
T ss_pred CCEEEEEeCchhHHH----HHHHHC----CCCEEEEEECCHHHHHHHHHHH----HHcCCCCceEEE--ECcchhhcccc
Confidence 347999999999543 344444 3479999999988777666554 445664 5553 33333311111
Q ss_pred ccccCCCeEEEeecc------------c----cccCCCCccHHHHHHH-HhcCCcEEEEEeecC
Q 045494 339 LQLRRGETLAVHWLQ------------H----SLYDATGPDWKTLRLL-EELSPRVVTLVEQEI 385 (492)
Q Consensus 339 l~l~~gEaLaVn~~l------------h----~L~~~~~~~~~~L~~I-r~L~PkvvvlvEqea 385 (492)
+ .+-+.|+.|-.. | .+....+..+.+-+.+ +.++|.-++++|...
T Consensus 190 f--~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 190 F--ASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp T--TTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred c--CCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 1 011456666211 0 0111122334344556 788899888887543
No 82
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=79.01 E-value=25 Score=30.97 Aligned_cols=107 Identities=18% Similarity=0.163 Sum_probs=54.6
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC--ceEEeeecccccccccccc
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL--SFEFHPIAKKFGDIDASML 339 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv--pFeF~~V~~~~eel~~~~l 339 (492)
-.|+|+|.|.|. +...|+.+.+ |.-++|||+.+...++.+.+++ +..|+ .++| +..+.+++... .
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~v~~--~~~d~~~~~~~-~ 90 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDIQDKAIANTTKKL----TDLNLIDRVTL--IKDGHQNMDKY-I 90 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECSCHHHHHHHHHHH----HHTTCGGGEEE--ECSCGGGGGGT-C
T ss_pred CEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH----HHcCCCCCeEE--EECCHHHHhhh-c
Confidence 379999999984 3333444321 2239999999888777665554 34466 3444 33444333210 0
Q ss_pred cccCCCeEEEeecc-----ccccCCCCccHHHHH-HHHhcCCcEEEEEe
Q 045494 340 QLRRGETLAVHWLQ-----HSLYDATGPDWKTLR-LLEELSPRVVTLVE 382 (492)
Q Consensus 340 ~l~~gEaLaVn~~l-----h~L~~~~~~~~~~L~-~Ir~L~PkvvvlvE 382 (492)
. ..=+.|++|... |...........+|+ ..+-|+|.-.+++.
T Consensus 91 ~-~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 91 D-CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp C-SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred c-CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 0 111345556422 111111111223554 45778998666543
No 83
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=78.59 E-value=10 Score=37.12 Aligned_cols=105 Identities=9% Similarity=0.126 Sum_probs=58.3
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-------ceEEeeecc--cc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-------SFEFHPIAK--KF 331 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-------pFeF~~V~~--~~ 331 (492)
.-+|+|+|.|.|.- +..++.+.+ -++|||+.+...++.+.++..+ .++ .++|..... +.
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~~----~~v~GiD~S~~~l~~A~~~~~~----~~~~~~~~~~~~~f~~~d~~~d~ 116 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGEI----ALLVATDPDADAIARGNERYNK----LNSGIKTKYYKFDYIQETIRSDT 116 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTTC----SEEEEEESCHHHHHHHHHHHHH----HCC----CCCEEEEEECCTTSSS
T ss_pred CCeEEEEecCCcHh----HHHHHhcCC----CeEEEEECCHHHHHHHHHHHHh----ccccccccccccchhhhhcccch
Confidence 45899999999852 222333322 3799999999989887776543 333 245543211 11
Q ss_pred --cccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE
Q 045494 332 --GDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 332 --eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
+++.. ...++ ++|.+.+.+|.+.+.. ....+|+.+ +.|+|.-++++
T Consensus 117 ~~~~l~~---~~~~~~FD~V~~~~~lhy~~~~~-~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 117 FVSSVRE---VFYFGKFNIIDWQFAIHYSFHPR-HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp HHHHHHT---TCCSSCEEEEEEESCGGGTCSTT-THHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhhhc---cccCCCeeEEEECchHHHhCCHH-HHHHHHHHHHHHcCCCCEEEE
Confidence 11100 01122 2344444566544433 245677655 77999877765
No 84
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=78.56 E-value=1.4 Score=42.75 Aligned_cols=48 Identities=17% Similarity=0.267 Sum_probs=32.8
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNF 314 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~f 314 (492)
+.-.|+|+|.+.| .+...|+.+.++ .+||||+.+...++.+.+++...
T Consensus 46 ~~~~VLDiGCG~G----~~~~~la~~~~~---~~v~gvDis~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 46 RGRDVLDLGCNVG----HLTLSIACKWGP---SRMVGLDIDSRLIHSARQNIRHY 93 (292)
T ss_dssp TTSEEEEESCTTC----HHHHHHHHHTCC---SEEEEEESCHHHHHHHHHTC---
T ss_pred CCCcEEEeCCCCC----HHHHHHHHHcCC---CEEEEECCCHHHHHHHHHHHHhh
Confidence 3457999999999 344455555322 49999999988888777776554
No 85
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=78.44 E-value=19 Score=31.76 Aligned_cols=98 Identities=18% Similarity=0.171 Sum_probs=54.8
Q ss_pred EEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccccc
Q 045494 263 HIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLR 342 (492)
Q Consensus 263 HIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~l~ 342 (492)
.|+|+|.+.|. +...|+.+ | .++|||+.+...++.+.+++. ..++.++|.. .+..++. +.-.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~--~---~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~~--~d~~~~~---~~~~ 93 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL--G---YEVTAVDQSSVGLAKAKQLAQ----EKGVKITTVQ--SNLADFD---IVAD 93 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT--T---CEEEEECSSHHHHHHHHHHHH----HHTCCEEEEC--CBTTTBS---CCTT
T ss_pred CEEEECCCCCH----hHHHHHhC--C---CeEEEEECCHHHHHHHHHHHH----hcCCceEEEE--cChhhcC---CCcC
Confidence 89999998876 34455555 2 399999998877766655543 3355555532 2333322 1111
Q ss_pred CCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 343 RGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 343 ~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
.=+.|++++ .|. .......+|+.+ +.|+|.-.+++.
T Consensus 94 ~fD~v~~~~-~~~---~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 94 AWEGIVSIF-CHL---PSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp TCSEEEEEC-CCC---CHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred CccEEEEEh-hcC---CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 113444443 332 111234556554 678998777664
No 86
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=78.38 E-value=4.3 Score=37.04 Aligned_cols=108 Identities=16% Similarity=0.172 Sum_probs=59.8
Q ss_pred HHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccc
Q 045494 252 ILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKF 331 (492)
Q Consensus 252 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~ 331 (492)
|++.+... -.|+|+|.+.|. +...|+.+ .++|||+.+...++.+.+++.. .+...+|.. .+.
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~--~d~ 88 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLSEEMLEIAQEKAME----TNRHVDFWV--QDM 88 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESCHHHHHHHHHHHHH----TTCCCEEEE--CCG
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECCHHHHHHHHHhhhh----cCCceEEEE--cCh
Confidence 44444332 479999999885 44455554 5899999988877766655433 344444432 223
Q ss_pred cccccccccccCCCeEEEee-ccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 332 GDIDASMLQLRRGETLAVHW-LQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 332 eel~~~~l~l~~gEaLaVn~-~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
.++.. . ..=+.|++++ .+|.+.+. .....+|+.+ +.|+|.-.++++
T Consensus 89 ~~~~~---~-~~fD~v~~~~~~~~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 89 RELEL---P-EPVDAITILCDSLNYLQTE-ADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GGCCC---S-SCEEEEEECTTGGGGCCSH-HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCC---C-CCcCEEEEeCCchhhcCCH-HHHHHHHHHHHHhcCCCeEEEEE
Confidence 22211 1 1113344443 44443221 1234556554 678999887774
No 87
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=78.28 E-value=3.1 Score=40.51 Aligned_cols=53 Identities=9% Similarity=-0.032 Sum_probs=37.2
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQL 311 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL 311 (492)
..|++.+.-...-+|+|+|.|.|. +-..||.+ + -++|||+.+...++.+.+++
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~S~~ml~~Ar~~~ 87 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDFSQRMCDDLAEAL 87 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHT
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEECCHHHHHHHHHHH
Confidence 345666654556689999999886 44456655 2 38999999987776665554
No 88
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=77.94 E-value=5.7 Score=39.59 Aligned_cols=115 Identities=14% Similarity=0.102 Sum_probs=63.1
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
++|++.+.-.+.-+|+|+|.|.|. |...++.+. .-++|||+.+. .++.+ .+.++..|++=....+..
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s~-~~~~a----~~~~~~~~l~~~v~~~~~ 106 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAST-MAQHA----EVLVKSNNLTDRIVVIPG 106 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECST-HHHHH----HHHHHHTTCTTTEEEEES
T ss_pred HHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCHH-HHHHH----HHHHHHcCCCCcEEEEEc
Confidence 567777765556689999999885 445566552 24899999873 44332 333344565322233444
Q ss_pred cccccccccccccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEe
Q 045494 330 KFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVE 382 (492)
Q Consensus 330 ~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvE 382 (492)
+.+++... ..=+.|+.+.+.+.+... ...+.+...-+-|+|.-+++..
T Consensus 107 d~~~~~~~----~~~D~Ivs~~~~~~~~~~-~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 107 KVEEVSLP----EQVDIIISEPMGYMLFNE-RMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CTTTCCCS----SCEEEEEECCCBTTBTTT-SHHHHHHHGGGGEEEEEEEESC
T ss_pred chhhCCCC----CceeEEEEeCchhcCChH-HHHHHHHHHHhhcCCCeEEEEe
Confidence 45444211 011234445444333221 2234444555789999888744
No 89
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=77.25 E-value=5.1 Score=35.78 Aligned_cols=106 Identities=20% Similarity=0.201 Sum_probs=57.8
Q ss_pred hHHHHhhhcc-CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEee
Q 045494 249 NQAILEAFHR-RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHP 326 (492)
Q Consensus 249 NqAILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~ 326 (492)
...+++.+.. ...-+|+|+|.+.|. +...|+.+ | .++|||+.+...++.+.+ .+. ..+|.
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~s~~~~~~a~~--------~~~~~~~~~- 95 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A---DRVTALDGSAEMIAEAGR--------HGLDNVEFR- 95 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S---SEEEEEESCHHHHHHHGG--------GCCTTEEEE-
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C---CeEEEEeCCHHHHHHHHh--------cCCCCeEEE-
Confidence 4456666652 333499999999986 34444444 2 489999988765544332 442 34443
Q ss_pred ecccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE
Q 045494 327 IAKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 327 V~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
..+..++ ..++ +.|+++..+|.+.+ .....+|+.+ +.|+|.-.+++
T Consensus 96 -~~d~~~~------~~~~~~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 96 -QQDLFDW------TPDRQWDAVFFAHWLAHVPD--DRFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp -ECCTTSC------CCSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred -ecccccC------CCCCceeEEEEechhhcCCH--HHHHHHHHHHHHHcCCCeEEEE
Confidence 2233332 1122 23445555554432 1135566554 77899765544
No 90
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=77.15 E-value=2.3 Score=40.91 Aligned_cols=114 Identities=15% Similarity=0.104 Sum_probs=63.0
Q ss_pred hHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeec
Q 045494 249 NQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIA 328 (492)
Q Consensus 249 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~ 328 (492)
-..+++.+..... .|+|+|.+.|. +...|+.+ | .++|||+.+...++.+.+++.+..-.+...++|. .
T Consensus 72 ~~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~--~ 139 (299)
T 3g2m_A 72 AREFATRTGPVSG-PVLELAAGMGR----LTFPFLDL--G---WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLV--Q 139 (299)
T ss_dssp HHHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT--T---CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEE--E
T ss_pred HHHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc--C---CeEEEEECCHHHHHHHHHHHhhcccccccceEEE--e
Confidence 3445555554444 89999999997 44455555 2 5899999988877776666543211111234443 2
Q ss_pred ccccccccccccccCC--CeEEEee-ccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 329 KKFGDIDASMLQLRRG--ETLAVHW-LQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 329 ~~~eel~~~~l~l~~g--EaLaVn~-~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
.+..++. . ++ +.|++.+ .+|.+.. .....+|+.+ +.|+|.-.++++
T Consensus 140 ~d~~~~~-----~-~~~fD~v~~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 140 GDMSAFA-----L-DKRFGTVVISSGSINELDE--ADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp CBTTBCC-----C-SCCEEEEEECHHHHTTSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CchhcCC-----c-CCCcCEEEECCcccccCCH--HHHHHHHHHHHHHcCCCcEEEEE
Confidence 3333332 1 22 2233332 3443211 1245666655 678998777664
No 91
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=77.11 E-value=7.2 Score=37.15 Aligned_cols=45 Identities=16% Similarity=-0.014 Sum_probs=31.3
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
+.-.|+|+|.|.|. +..++. +..+ -+||||+.+...++.+.+++.
T Consensus 71 ~~~~vLDiGcG~G~-~~~l~~----~~~~---~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLLSA----CSHF---EDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCTTCC-GGGTTG----GGGC---SEEEEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcCh-HHHHhh----ccCC---CeEEEeCCCHHHHHHHHHHHh
Confidence 44689999999998 543322 2112 389999999888877766553
No 92
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=76.96 E-value=2.3 Score=40.37 Aligned_cols=99 Identities=8% Similarity=0.053 Sum_probs=58.9
Q ss_pred EEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccccc
Q 045494 263 HIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLR 342 (492)
Q Consensus 263 HIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~l~ 342 (492)
+|+|+|.|.| +|--.++.+ .|..+++|++-+...++-+.++ |+..|+...+... +..+ . .-
T Consensus 52 ~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di~~~~leiar~~----~~~~g~~~~v~~~--d~~~---~---~~ 112 (200)
T 3fzg_A 52 SILDFGCGFN----PLALYQWNE---NEKIIYHAYDIDRAEIAFLSSI----IGKLKTTIKYRFL--NKES---D---VY 112 (200)
T ss_dssp EEEEETCTTH----HHHHHHHCS---SCCCEEEEECSCHHHHHHHHHH----HHHSCCSSEEEEE--CCHH---H---HT
T ss_pred eEEEecCCCC----HHHHHHHhc---CCCCEEEEEeCCHHHHHHHHHH----HHhcCCCccEEEe--cccc---c---CC
Confidence 7899988766 444444443 2456999999988777665555 5667887444331 1111 0 11
Q ss_pred CC--CeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEee
Q 045494 343 RG--ETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVEQ 383 (492)
Q Consensus 343 ~g--EaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvEq 383 (492)
++ ++|..+-++|.+.+... ..++.++.|+|..+++.=+
T Consensus 113 ~~~~DvVLa~k~LHlL~~~~~---al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 113 KGTYDVVFLLKMLPVLKQQDV---NILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp TSEEEEEEEETCHHHHHHTTC---CHHHHHHTCEEEEEEEEEE
T ss_pred CCCcChhhHhhHHHhhhhhHH---HHHHHHHHhCCCCEEEEeC
Confidence 12 23333435677743333 4568889999999888643
No 93
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=75.84 E-value=12 Score=32.10 Aligned_cols=101 Identities=10% Similarity=0.046 Sum_probs=57.2
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccc
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKK 330 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~ 330 (492)
.+++.+.-.+.-.|+|+|.+.|. +...|+.+. . ++|||+.+...++.+.++ .-..+|.. .+
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s~~~~~~a~~~--------~~~v~~~~--~d 68 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDINVIALKEVKEK--------FDSVITLS--DP 68 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSCHHHHHHHHHH--------CTTSEEES--SG
T ss_pred HHHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCCHHHHHHHHHh--------CCCcEEEe--CC
Confidence 34555555667789999999886 344455442 3 999999987766655554 11233321 11
Q ss_pred ccccccccccccCC--CeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEe
Q 045494 331 FGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVE 382 (492)
Q Consensus 331 ~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvE 382 (492)
+...++ +.|.++..+|.+. + ...+|+ ..+.|+|.-.+++.
T Consensus 69 --------~~~~~~~~D~v~~~~~l~~~~---~-~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 69 --------KEIPDNSVDFILFANSFHDMD---D-KQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp --------GGSCTTCEEEEEEESCSTTCS---C-HHHHHHHHHHHEEEEEEEEEE
T ss_pred --------CCCCCCceEEEEEccchhccc---C-HHHHHHHHHHhcCCCCEEEEE
Confidence 222222 2344454455442 2 345555 45778997666553
No 94
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=75.44 E-value=6.7 Score=35.69 Aligned_cols=108 Identities=14% Similarity=0.142 Sum_probs=59.9
Q ss_pred hHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeec
Q 045494 249 NQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIA 328 (492)
Q Consensus 249 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~ 328 (492)
-..|.+.+.....-.|+|+|.+.|. +...|+.+ |+ -++|||+.+...++.+.+++.. - .++|. .
T Consensus 32 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s~~~~~~a~~~~~~----~--~~~~~--~ 95 (243)
T 3bkw_A 32 WPALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLSEKMLARARAAGPD----T--GITYE--R 95 (243)
T ss_dssp HHHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCHHHHHHHHHTSCS----S--SEEEE--E
T ss_pred HHHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCCHHHHHHHHHhccc----C--CceEE--E
Confidence 3456666665556689999999885 34455555 22 2899999887766554443321 1 23332 2
Q ss_pred ccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE
Q 045494 329 KKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 329 ~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
.+..++. ..++ +.|+++..+|.+. ....+|+.+ +.|+|.-.+++
T Consensus 96 ~d~~~~~-----~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 96 ADLDKLH-----LPQDSFDLAYSSLALHYVE----DVARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp CCGGGCC-----CCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred cChhhcc-----CCCCCceEEEEeccccccc----hHHHHHHHHHHhcCcCcEEEE
Confidence 2333321 2222 2344444455442 245566554 67899866655
No 95
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=74.95 E-value=9 Score=36.02 Aligned_cols=107 Identities=9% Similarity=0.033 Sum_probs=58.1
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASML 339 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l 339 (492)
+.-.|+|+|.|.|.--.. |+.+. ..++|||+.+...++.+.+++. ..++.-....+..+..++..
T Consensus 64 ~~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~~~d~~~~~~--- 128 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIAEVSINDARVRAR----NMKRRFKVFFRAQDSYGRHM--- 128 (298)
T ss_dssp TTCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESCHHHHHHHHHHHH----TSCCSSEEEEEESCTTTSCC---
T ss_pred CCCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECCHHHHHHHHHHHH----hcCCCccEEEEECCcccccc---
Confidence 345899999999864333 44332 2489999998877766655543 34553233333334433311
Q ss_pred cccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 340 QLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 340 ~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
. .++ +.|+++..+|.+.........+|+.+ +-|+|.-.+++.
T Consensus 129 ~-~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 129 D-LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp C-CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred C-CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 0 122 34445544444322222234566554 778998766654
No 96
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=74.79 E-value=9.9 Score=38.59 Aligned_cols=119 Identities=13% Similarity=0.053 Sum_probs=67.4
Q ss_pred hhhHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC----ce
Q 045494 247 TSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL----SF 322 (492)
Q Consensus 247 tANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv----pF 322 (492)
.....+++.+.....-+|+|+|.|.|. +...|+.+. |..++|||+.+...++.+.+++.. .|+ .+
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~s~~al~~Ar~n~~~----ngl~~~~~v 277 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDESPMAVASSRLNVET----NMPEALDRC 277 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEESCHHHHHHHHHHHHH----HCGGGGGGE
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEECcHHHHHHHHHHHHH----cCCCcCceE
Confidence 344578888876666789999999995 334444442 346999999988877766665543 343 24
Q ss_pred EEeeecccccccccccccccCCCeEEEeeccccccCCC-CccHHHHHHH-HhcCCcEEEEEe
Q 045494 323 EFHPIAKKFGDIDASMLQLRRGETLAVHWLQHSLYDAT-GPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 323 eF~~V~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~-~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
+|. ..+..+. +.-..=+.|++|..+|...... .....+++.+ +.|+|.-.+++.
T Consensus 278 ~~~--~~D~~~~----~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 278 EFM--INNALSG----VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp EEE--ECSTTTT----CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEE--echhhcc----CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 443 2222220 1101113566776555422221 1233566655 568998877764
No 97
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=73.96 E-value=3.2 Score=43.79 Aligned_cols=114 Identities=14% Similarity=0.109 Sum_probs=63.7
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeee
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPI 327 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V 327 (492)
.+|++.+...+.-+|+|+|.|.|. +...|+.+ +..++|||+.+. .++.+ .+.++..|+. .+| +
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~----~~~~V~gvD~s~-~l~~A----~~~~~~~gl~~~v~~--~ 212 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQA----GARKIYAVEAST-MAQHA----EVLVKSNNLTDRIVV--I 212 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHT----TCSEEEEEECHH-HHHHH----HHHHHHTTCTTTEEE--E
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHc----CCCEEEEEEcHH-HHHHH----HHHHHHcCCCCcEEE--E
Confidence 466676655555699999999886 44456654 236999999865 44333 3344555663 444 3
Q ss_pred cccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEee
Q 045494 328 AKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVEQ 383 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvEq 383 (492)
..+++++... ..=+.|+.|.+.+.+... ...+.+...-+-|+|.-.++.+.
T Consensus 213 ~~d~~~~~~~----~~fD~Ivs~~~~~~~~~e-~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 213 PGKVEEVSLP----EQVDIIISEPMGYMLFNE-RMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp ESCTTTCCCS----SCEEEEECCCCHHHHTCH-HHHHHHHHGGGGEEEEEEEESCE
T ss_pred ECchhhCccC----CCeEEEEEeCchHhcCcH-HHHHHHHHHHHhcCCCCEEEEEe
Confidence 4444443211 011345556553333221 12233444457889998887543
No 98
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=73.92 E-value=3.7 Score=41.56 Aligned_cols=107 Identities=17% Similarity=0.173 Sum_probs=60.1
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccc
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKK 330 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~ 330 (492)
.|++.+.-...-.|+|+|.+.|. ++..|+.+ | .++|||+.+...++ .|+..|++..-..+..
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s~~~~~--------~a~~~~~~~~~~~~~~- 159 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPSSGVAA--------KAREKGIRVRTDFFEK- 159 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCCHHHHH--------HHHTTTCCEECSCCSH-
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCCHHHHH--------HHHHcCCCcceeeech-
Confidence 44555544456689999999998 55666654 3 39999999866554 3444466543211111
Q ss_pred ccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 331 FGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 331 ~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
-+...+...++ +.|+.+..+|.+. ....+|+.+ +-|+|.-+++++
T Consensus 160 ---~~~~~l~~~~~~fD~I~~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 160 ---ATADDVRRTEGPANVIYAANTLCHIP----YVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp ---HHHHHHHHHHCCEEEEEEESCGGGCT----THHHHHHHHHHHEEEEEEEEEE
T ss_pred ---hhHhhcccCCCCEEEEEECChHHhcC----CHHHHHHHHHHHcCCCeEEEEE
Confidence 01111111122 2344444455443 245566655 678998777775
No 99
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=73.62 E-value=21 Score=32.15 Aligned_cols=109 Identities=13% Similarity=0.139 Sum_probs=59.4
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEeeeccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHPIAKKFGDIDASM 338 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~V~~~~eel~~~~ 338 (492)
+.-.|+|+|.|.|.- ...||.+. |..++|||+.+...++.+.+++ +..|+ .++| +..+..++.. .
T Consensus 41 ~~~~vLDiGcG~G~~----~~~la~~~---p~~~v~gvD~s~~~l~~a~~~~----~~~~~~~v~~--~~~d~~~~~~-~ 106 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAF----VSGMAKQN---PDINYIGIDIQKSVLSYALDKV----LEVGVPNIKL--LWVDGSDLTD-Y 106 (214)
T ss_dssp CCCEEEEESCTTSHH----HHHHHHHC---TTSEEEEEESCHHHHHHHHHHH----HHHCCSSEEE--EECCSSCGGG-T
T ss_pred CCCeEEEEccCcCHH----HHHHHHHC---CCCCEEEEEcCHHHHHHHHHHH----HHcCCCCEEE--EeCCHHHHHh-h
Confidence 344699999998853 33344432 3479999999888776665554 34455 2444 3333333210 0
Q ss_pred ccccCC--CeEEEeeccccccCCC----CccHHHHHHH-HhcCCcEEEEEeec
Q 045494 339 LQLRRG--ETLAVHWLQHSLYDAT----GPDWKTLRLL-EELSPRVVTLVEQE 384 (492)
Q Consensus 339 l~l~~g--EaLaVn~~lh~L~~~~----~~~~~~L~~I-r~L~PkvvvlvEqe 384 (492)
+.++ +.|++|+......... .....+|+.+ +.|+|.-+++++.+
T Consensus 107 --~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 107 --FEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp --SCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred --cCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 1122 3566664311000000 1125677766 55999988877643
No 100
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=73.45 E-value=15 Score=33.18 Aligned_cols=105 Identities=19% Similarity=0.027 Sum_probs=58.7
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC---ceEEeeeccccccccccc
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL---SFEFHPIAKKFGDIDASM 338 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv---pFeF~~V~~~~eel~~~~ 338 (492)
-.|+|+|.|.|.--. .++.+ |. -++|||+.+.+.++.+.+++. ..|+ ..+|. ..+..++.+.
T Consensus 55 ~~vLDlGcGtG~~~~----~~~~~--~~--~~v~gvD~s~~~l~~a~~~~~----~~~~~~~~v~~~--~~d~~~~~~~- 119 (201)
T 2ift_A 55 SECLDGFAGSGSLGF----EALSR--QA--KKVTFLELDKTVANQLKKNLQ----TLKCSSEQAEVI--NQSSLDFLKQ- 119 (201)
T ss_dssp CEEEETTCTTCHHHH----HHHHT--TC--SEEEEECSCHHHHHHHHHHHH----HTTCCTTTEEEE--CSCHHHHTTS-
T ss_pred CeEEEcCCccCHHHH----HHHHc--cC--CEEEEEECCHHHHHHHHHHHH----HhCCCccceEEE--ECCHHHHHHh-
Confidence 479999999885322 22333 21 489999999887776666553 4555 34443 2333222111
Q ss_pred ccccC-CCeEEEeeccccccCCCCccHHHHHHHHh---cCCcEEEEEeecCC
Q 045494 339 LQLRR-GETLAVHWLQHSLYDATGPDWKTLRLLEE---LSPRVVTLVEQEIS 386 (492)
Q Consensus 339 l~l~~-gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~---L~PkvvvlvEqea~ 386 (492)
+.-.. =+.|++|..+| ....+.+++.+.+ |+|.-+++++....
T Consensus 120 ~~~~~~fD~I~~~~~~~-----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 120 PQNQPHFDVVFLDPPFH-----FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSSCCEEEEEECCCSS-----SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred hccCCCCCEEEECCCCC-----CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 00001 12344454433 1235678888865 99998887765544
No 101
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=73.30 E-value=8.4 Score=35.38 Aligned_cols=151 Identities=14% Similarity=0.132 Sum_probs=80.0
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
..+++.+.....-.|+|+|.+.|.--. .|+.+. ..++|||+.+...++.+.+++... -..+|. ..
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~----~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~--~~ 147 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITK----NLLTKL----YATTDLLEPVKHMLEEAKRELAGM-----PVGKFI--LA 147 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHH----HTHHHH----CSEEEEEESCHHHHHHHHHHTTTS-----SEEEEE--ES
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHH----HHHHhh----cCEEEEEeCCHHHHHHHHHHhccC-----CceEEE--Ec
Confidence 456666655566789999999987333 333331 248999998877776655554321 223332 23
Q ss_pred cccccccccccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEEeecCCCCCCChHHHHHHHHHHHHHH
Q 045494 330 KFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLVEQEISHGGDDPNRHRVEHCLLYREI 406 (492)
Q Consensus 330 ~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~PkvvvlvEqea~hnsd~~eR~~iE~~~lgreI 406 (492)
+..++. ..++ +.|+++..+|.+.+ .....+|+. .+.|+|.-.+++..........
T Consensus 148 d~~~~~-----~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~--------------- 205 (254)
T 1xtp_A 148 SMETAT-----LPPNTYDLIVIQWTAIYLTD--ADFVKFFKHCQQALTPNGYIFFKENCSTGDRF--------------- 205 (254)
T ss_dssp CGGGCC-----CCSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE---------------
T ss_pred cHHHCC-----CCCCCeEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEEEecCCCcccc---------------
Confidence 333322 2222 33444544554422 123455554 4778998766654322111000
Q ss_pred HHHHhhcCCCcccccchhhHHHHHhccCCCeeccCC
Q 045494 407 NNILAIGGPARSGEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 407 ~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
.... ......-+.+.|+..|.. +||+.+...
T Consensus 206 --~~~~--~~~~~~~~~~~~~~~l~~-aGf~~~~~~ 236 (254)
T 1xtp_A 206 --LVDK--EDSSLTRSDIHYKRLFNE-SGVRVVKEA 236 (254)
T ss_dssp --EEET--TTTEEEBCHHHHHHHHHH-HTCCEEEEE
T ss_pred --eecc--cCCcccCCHHHHHHHHHH-CCCEEEEee
Confidence 0000 011111245789999999 999987653
No 102
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=73.19 E-value=19 Score=32.25 Aligned_cols=100 Identities=12% Similarity=0.053 Sum_probs=54.6
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
.-.|+|+|.|.|. +...|+.+ ++ ++|||+.+.+.++.+.+++. ..+...+|. ..+..++.
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~--~~d~~~~~----- 98 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDISEDMIRKAREYAK----SRESNVEFI--VGDARKLS----- 98 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCHHHHHHHHHHHH----HTTCCCEEE--ECCTTSCC-----
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECCHHHHHHHHHHHH----hcCCCceEE--ECchhcCC-----
Confidence 4589999999884 34556655 33 99999998777766655543 333334443 23333322
Q ss_pred ccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEEe
Q 045494 341 LRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLVE 382 (492)
Q Consensus 341 l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~PkvvvlvE 382 (492)
+.++ +.|+++..+|.... .....+|+. .+.|+|.-.+++.
T Consensus 99 ~~~~~~D~v~~~~~~~~~~~--~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 99 FEDKTFDYVIFIDSIVHFEP--LELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp SCTTCEEEEEEESCGGGCCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCcEEEEEEcCchHhCCH--HHHHHHHHHHHHHcCCCcEEEEE
Confidence 2122 34555543222111 113455554 4778998665543
No 103
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=72.64 E-value=7.3 Score=36.57 Aligned_cols=108 Identities=14% Similarity=0.083 Sum_probs=58.7
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
..|++.+.-.+.-.|+|+|.|.|. +...|+. |..++|||+.+...++.+.++. ..+|. ..
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~~~~~~a~~~~---------~~~~~--~~ 83 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPSIVMRQQAVVHP---------QVEWF--TG 83 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSCHHHHHSSCCCT---------TEEEE--CC
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCCHHHHHHHHhcc---------CCEEE--EC
Confidence 455666654556789999999986 3344443 2369999998875554322221 33442 23
Q ss_pred cccccccccccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcE-EEEEeecCCC
Q 045494 330 KFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRV-VTLVEQEISH 387 (492)
Q Consensus 330 ~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~Pkv-vvlvEqea~h 387 (492)
+.+++. ..++ +.|.++..+|.+.+ ...+|+. .+.|+ .- +++++...++
T Consensus 84 d~~~~~-----~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 84 YAENLA-----LPDKSVDGVISILAIHHFSH----LEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp CTTSCC-----SCTTCBSEEEEESCGGGCSS----HHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred chhhCC-----CCCCCEeEEEEcchHhhccC----HHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 333322 2222 34555555555422 3455544 46677 53 6666655443
No 104
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=72.16 E-value=13 Score=36.95 Aligned_cols=110 Identities=16% Similarity=0.160 Sum_probs=61.8
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC--ceEEeee
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL--SFEFHPI 327 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv--pFeF~~V 327 (492)
.+|++.+.-.+.-.|+|+|.|.|. +...++.+ | .-+++||+.+. .++.+.++ ++..|+ ..+| +
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~--g--~~~v~gvD~s~-~~~~a~~~----~~~~~~~~~i~~--~ 118 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA--G--AKKVLGVDQSE-ILYQAMDI----IRLNKLEDTITL--I 118 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT--T--CSEEEEEESST-HHHHHHHH----HHHTTCTTTEEE--E
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc--C--CCEEEEEChHH-HHHHHHHH----HHHcCCCCcEEE--E
Confidence 456565544445589999999995 34455655 2 25899999874 55444333 344454 2343 3
Q ss_pred cccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEE
Q 045494 328 AKKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTL 380 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvl 380 (492)
..+.+++. +.++ ++|+.+++.+.+... ...+.+|+.+ +-|+|.-.++
T Consensus 119 ~~d~~~~~-----~~~~~~D~Ivs~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 119 KGKIEEVH-----LPVEKVDVIISEWMGYFLLFE-SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ESCTTTSC-----CSCSCEEEEEECCCBTTBTTT-CHHHHHHHHHHHHEEEEEEEE
T ss_pred EeeHHHhc-----CCCCcEEEEEEcCchhhccCH-HHHHHHHHHHHhhcCCCcEEE
Confidence 34444432 2112 345555543333222 3345677665 7799998776
No 105
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=71.65 E-value=28 Score=30.98 Aligned_cols=110 Identities=9% Similarity=-0.002 Sum_probs=61.4
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeec
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIA 328 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~ 328 (492)
..+++.+.-.+.-.|+|+|.|.|. +...|+.+ + |..++|||+.+.+.++.+.+++. ..|++ ++| +.
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~--~-~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~v~~--~~ 96 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSAS----VSIEASNL--M-PNGRIFALERNPQYLGFIRDNLK----KFVARNVTL--VE 96 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCH----HHHHHHHH--C-TTSEEEEEECCHHHHHHHHHHHH----HHTCTTEEE--EE
T ss_pred HHHHHHcCCCCCCEEEEECCCCCH----HHHHHHHH--C-CCCEEEEEeCCHHHHHHHHHHHH----HhCCCcEEE--Ee
Confidence 445666655566789999999886 23334444 2 45699999998887766665544 34552 343 22
Q ss_pred ccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 329 KKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 329 ~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
.+..+.-.. ...=+.+.++...+ ....+|+.+ +.|+|.-.+++.
T Consensus 97 ~d~~~~~~~---~~~~D~i~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 97 AFAPEGLDD---LPDPDRVFIGGSGG-------MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp CCTTTTCTT---SCCCSEEEESCCTT-------CHHHHHHHHHHHCCTTCEEEEE
T ss_pred CChhhhhhc---CCCCCEEEECCCCc-------CHHHHHHHHHHhcCCCeEEEEE
Confidence 333221110 11113444443222 244566544 668998777654
No 106
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=71.21 E-value=9 Score=34.24 Aligned_cols=104 Identities=15% Similarity=0.301 Sum_probs=57.7
Q ss_pred hHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeec
Q 045494 249 NQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIA 328 (492)
Q Consensus 249 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~ 328 (492)
...|++.+. .+.-+|+|+|.+.|. +...|+.+ | .++|||+.+...++.+.+++ . +| +.
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G~----~~~~l~~~--~---~~~~~~D~~~~~~~~~~~~~--------~--~~--~~ 79 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSGA----LGAAIKEN--G---TRVSGIEAFPEAAEQAKEKL--------D--HV--VL 79 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTSH----HHHHHHTT--T---CEEEEEESSHHHHHHHHTTS--------S--EE--EE
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCCH----HHHHHHhc--C---CeEEEEeCCHHHHHHHHHhC--------C--cE--EE
Confidence 356666665 556789999999883 55566666 2 58999998876554433322 2 22 22
Q ss_pred ccccccccccccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE
Q 045494 329 KKFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 329 ~~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
.+..+.. +...++ +.|+++..+|.+.+ ...+|+.+ +.|+|.-.+++
T Consensus 80 ~d~~~~~---~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 80 GDIETMD---MPYEEEQFDCVIFGDVLEHLFD----PWAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp SCTTTCC---CCSCTTCEEEEEEESCGGGSSC----HHHHHHHTGGGEEEEEEEEE
T ss_pred cchhhcC---CCCCCCccCEEEECChhhhcCC----HHHHHHHHHHHcCCCCEEEE
Confidence 2332211 112222 23444444444322 34666655 66788865555
No 107
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=70.72 E-value=7.6 Score=34.95 Aligned_cols=115 Identities=10% Similarity=0.043 Sum_probs=63.9
Q ss_pred HHHhhhcc-CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecc
Q 045494 251 AILEAFHR-RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAK 329 (492)
Q Consensus 251 AILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~ 329 (492)
.+++.+.. ...-+|+|+|.+.|.- ...|+ .++|||+.+.. ++.| +..
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~----~~~l~--------~~v~~~D~s~~----------------~~~~----~~~ 104 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRL----ASSIR--------NPVHCFDLASL----------------DPRV----TVC 104 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHH----HHHCC--------SCEEEEESSCS----------------STTE----EES
T ss_pred HHHHHHhccCCCCeEEEECCcCCHH----HHHhh--------ccEEEEeCCCC----------------CceE----EEe
Confidence 35555542 3446799999998863 23332 48999987654 3332 222
Q ss_pred cccccccccccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEE-eecCCCCCCChHHHHHHHHHHHHH
Q 045494 330 KFGDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLV-EQEISHGGDDPNRHRVEHCLLYRE 405 (492)
Q Consensus 330 ~~eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~Pkvvvlv-Eqea~hnsd~~eR~~iE~~~lgre 405 (492)
+..++ ...++ +.|+++..+|. . ....+|+. .+-|+|.-.+++ |....
T Consensus 105 d~~~~-----~~~~~~fD~v~~~~~l~~----~-~~~~~l~~~~~~L~~gG~l~i~~~~~~------------------- 155 (215)
T 2zfu_A 105 DMAQV-----PLEDESVDVAVFCLSLMG----T-NIRDFLEEANRVLKPGGLLKVAEVSSR------------------- 155 (215)
T ss_dssp CTTSC-----SCCTTCEEEEEEESCCCS----S-CHHHHHHHHHHHEEEEEEEEEEECGGG-------------------
T ss_pred ccccC-----CCCCCCEeEEEEehhccc----c-CHHHHHHHHHHhCCCCeEEEEEEcCCC-------------------
Confidence 23222 22222 34444544552 2 24455554 477899865544 42210
Q ss_pred HHHHHhhcCCCcccccchhhHHHHHhccCCCeeccC
Q 045494 406 INNILAIGGPARSGEDKFKHWRSELARCNGFAQVPM 441 (492)
Q Consensus 406 I~NiVAcEG~~R~rhE~~~~Wr~rm~~~AGF~~v~l 441 (492)
....+.|...|.. +||+.+..
T Consensus 156 --------------~~~~~~~~~~l~~-~Gf~~~~~ 176 (215)
T 2zfu_A 156 --------------FEDVRTFLRAVTK-LGFKIVSK 176 (215)
T ss_dssp --------------CSCHHHHHHHHHH-TTEEEEEE
T ss_pred --------------CCCHHHHHHHHHH-CCCEEEEE
Confidence 1145788888999 99987763
No 108
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=69.07 E-value=9.8 Score=32.44 Aligned_cols=104 Identities=12% Similarity=-0.064 Sum_probs=56.6
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
.-.|+|+|.|.|. +...|+.+ |+ . +|||+.+...++.+.+++. ..++..+| +..+..+..+. +.
T Consensus 42 ~~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~~~~~~~~a~~~~~----~~~~~~~~--~~~d~~~~~~~-~~ 105 (171)
T 1ws6_A 42 RGRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEKDPEAVRLLKENVR----RTGLGARV--VALPVEVFLPE-AK 105 (171)
T ss_dssp CCEEEEETCSSCH----HHHHHHHT--TC-E--EEEECCCHHHHHHHHHHHH----HHTCCCEE--ECSCHHHHHHH-HH
T ss_pred CCeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeCCHHHHHHHHHHHH----HcCCceEE--EeccHHHHHHh-hh
Confidence 3479999999995 34445554 32 3 9999998877766655543 34543333 23333221100 00
Q ss_pred cc--CCCeEEEeeccccccCCCCccHHHHHHH---HhcCCcEEEEEeecCC
Q 045494 341 LR--RGETLAVHWLQHSLYDATGPDWKTLRLL---EELSPRVVTLVEQEIS 386 (492)
Q Consensus 341 l~--~gEaLaVn~~lh~L~~~~~~~~~~L~~I---r~L~PkvvvlvEqea~ 386 (492)
-. .=+.|.+|...| . ..+.+++.+ +-|+|.-+++++....
T Consensus 106 ~~~~~~D~i~~~~~~~---~---~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 106 AQGERFTVAFMAPPYA---M---DLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HTTCCEEEEEECCCTT---S---CTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred ccCCceEEEEECCCCc---h---hHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 00 112345554444 1 233555555 5599998887765443
No 109
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=69.04 E-value=4.4 Score=40.23 Aligned_cols=117 Identities=15% Similarity=0.102 Sum_probs=67.0
Q ss_pred hhHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeee
Q 045494 248 SNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPI 327 (492)
Q Consensus 248 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V 327 (492)
..+.+++.+.....-+|+|+|.|.|.--.. |+.+ + |..++|||+.+...++.+.+++. ..++..+| +
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~----la~~--~-~~~~v~~vD~s~~~l~~a~~~~~----~~~~~~~~--~ 250 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVA----FARH--S-PKIRLTLCDVSAPAVEASRATLA----ANGVEGEV--F 250 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHH----HHHH--C-TTCBCEEEESBHHHHHHHHHHHH----HTTCCCEE--E
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHH----HHHH--C-CCCEEEEEECCHHHHHHHHHHHH----HhCCCCEE--E
Confidence 467788888543344799999998874333 3333 2 45699999998877776666553 35666555 2
Q ss_pred cccccccccccccccCCCeEEEeeccccccC-CCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 328 AKKFGDIDASMLQLRRGETLAVHWLQHSLYD-ATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~-~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
..+..+... ..=+.|++|..+|.... .......+|+.+ +-|+|.-.+++.
T Consensus 251 ~~d~~~~~~-----~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 251 ASNVFSEVK-----GRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp ECSTTTTCC-----SCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred Ecccccccc-----CCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 222222110 11134566655553111 111234566555 678998777664
No 110
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=68.20 E-value=37 Score=30.70 Aligned_cols=105 Identities=16% Similarity=0.074 Sum_probs=60.1
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeee
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPI 327 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V 327 (492)
..+++.+.-...-.|+|+|.+.|. +...||.+ + -++|||+.+.+.++.+.++ ++..|++ ++|.
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s~~~~~~a~~~----~~~~g~~~~v~~~-- 109 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPRADRIENIQKN----IDTYGLSPRMRAV-- 109 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHH----HHHTTCTTTEEEE--
T ss_pred HHHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCCHHHHHHHHHH----HHHcCCCCCEEEE--
Confidence 345666655555679999999885 33445555 2 5899999988777665544 4556776 5553
Q ss_pred cccccc-cccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 328 AKKFGD-IDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 328 ~~~~ee-l~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
..+..+ +.. ...=++|.++.. ...+ +++.+ +.|+|.-.+++.
T Consensus 110 ~~d~~~~~~~----~~~~D~v~~~~~--------~~~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 110 QGTAPAALAD----LPLPEAVFIGGG--------GSQA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp ESCTTGGGTT----SCCCSEEEECSC--------CCHH-HHHHHHHHSCTTCEEEEE
T ss_pred eCchhhhccc----CCCCCEEEECCc--------ccHH-HHHHHHHhcCCCcEEEEE
Confidence 333333 111 111134443321 1234 66655 568997666654
No 111
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=67.39 E-value=25 Score=30.66 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=30.8
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFN 313 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~ 313 (492)
-+|+|+|.|.|.- ...||.+ .-++|||+.+.+.++.+.+++.+
T Consensus 24 ~~vLDiGcG~G~~----~~~la~~-----~~~v~~vD~s~~~l~~a~~~~~~ 66 (185)
T 3mti_A 24 SIVVDATMGNGND----TAFLAGL-----SKKVYAFDVQEQALGKTSQRLSD 66 (185)
T ss_dssp CEEEESCCTTSHH----HHHHHTT-----SSEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCHH----HHHHHHh-----CCEEEEEECCHHHHHHHHHHHHH
Confidence 3689999998863 3345555 25899999998878776665543
No 112
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=66.72 E-value=25 Score=31.33 Aligned_cols=106 Identities=10% Similarity=0.050 Sum_probs=59.4
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeec
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIA 328 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~ 328 (492)
..+++.+.-.+.-+|+|+|.+.|..=.. |+.+ + -++|||+.+...++.+.+++. ..|++ .+|. .
T Consensus 67 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~----la~~-~----~~v~~vD~~~~~~~~a~~~~~----~~~~~~v~~~--~ 131 (210)
T 3lbf_A 67 ARMTELLELTPQSRVLEIGTGSGYQTAI----LAHL-V----QHVCSVERIKGLQWQARRRLK----NLDLHNVSTR--H 131 (210)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHH----HHHH-S----SEEEEEESCHHHHHHHHHHHH----HTTCCSEEEE--E
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCHHHHH----HHHh-C----CEEEEEecCHHHHHHHHHHHH----HcCCCceEEE--E
Confidence 3445666555667899999998864333 3333 2 489999998877776666554 34554 3332 2
Q ss_pred ccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEe
Q 045494 329 KKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVE 382 (492)
Q Consensus 329 ~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvE 382 (492)
.+..+.... -.+=+.|+++..+|.+.+ ...+.|+|.-.+++.
T Consensus 132 ~d~~~~~~~---~~~~D~i~~~~~~~~~~~---------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 132 GDGWQGWQA---RAPFDAIIVTAAPPEIPT---------ALMTQLDEGGILVLP 173 (210)
T ss_dssp SCGGGCCGG---GCCEEEEEESSBCSSCCT---------HHHHTEEEEEEEEEE
T ss_pred CCcccCCcc---CCCccEEEEccchhhhhH---------HHHHhcccCcEEEEE
Confidence 233221111 011134555544444332 356778898666554
No 113
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=65.21 E-value=15 Score=33.30 Aligned_cols=101 Identities=19% Similarity=0.064 Sum_probs=57.9
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEeeeccccccccccccc
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~V~~~~eel~~~~l~ 340 (492)
-+|+|+|.+.|.--..+ +.+ |. -++|||+.+...++.+.+++ +..|+ ..+|. ..+..+..+.
T Consensus 56 ~~vLDlgcG~G~~~~~l----~~~--~~--~~V~~vD~s~~~l~~a~~~~----~~~~~~~v~~~--~~D~~~~~~~--- 118 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEA----LSR--YA--AGATLIEMDRAVSQQLIKNL----ATLKAGNARVV--NSNAMSFLAQ--- 118 (202)
T ss_dssp CEEEETTCTTCHHHHHH----HHT--TC--SEEEEECSCHHHHHHHHHHH----HHTTCCSEEEE--CSCHHHHHSS---
T ss_pred CeEEEeCCCcCHHHHHH----Hhc--CC--CEEEEEECCHHHHHHHHHHH----HHcCCCcEEEE--ECCHHHHHhh---
Confidence 47999999988643332 223 21 28999999988777665554 34555 34443 2333221110
Q ss_pred ccCC--CeEEEeeccccccCCCCccHHHHHHHHh---cCCcEEEEEeecC
Q 045494 341 LRRG--ETLAVHWLQHSLYDATGPDWKTLRLLEE---LSPRVVTLVEQEI 385 (492)
Q Consensus 341 l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~Ir~---L~PkvvvlvEqea 385 (492)
.++ +.|++|..+|. .....+++.+.+ |+|.-+++++...
T Consensus 119 -~~~~fD~V~~~~p~~~-----~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 119 -KGTPHNIVFVDPPFRR-----GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp -CCCCEEEEEECCSSST-----TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred -cCCCCCEEEECCCCCC-----CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 111 24445543331 235678888876 9999888776544
No 114
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=63.78 E-value=14 Score=32.97 Aligned_cols=89 Identities=16% Similarity=0.113 Sum_probs=47.1
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASML 339 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l 339 (492)
+.-.|+|+|.|.|. +...|+.+ | .-++|||+.+...++.+.+++. ++ +| +..+..++.
T Consensus 51 ~~~~vlD~gcG~G~----~~~~l~~~--~--~~~v~~vD~~~~~~~~a~~~~~------~~--~~--~~~d~~~~~---- 108 (200)
T 1ne2_A 51 GGRSVIDAGTGNGI----LACGSYLL--G--AESVTAFDIDPDAIETAKRNCG------GV--NF--MVADVSEIS---- 108 (200)
T ss_dssp BTSEEEEETCTTCH----HHHHHHHT--T--BSEEEEEESCHHHHHHHHHHCT------TS--EE--EECCGGGCC----
T ss_pred CCCEEEEEeCCccH----HHHHHHHc--C--CCEEEEEECCHHHHHHHHHhcC------CC--EE--EECcHHHCC----
Confidence 34479999999987 34455555 1 2479999998777766655543 32 33 223333331
Q ss_pred cccCCCeEEEeeccccccCCCCccHHHHHHHHhcC
Q 045494 340 QLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELS 374 (492)
Q Consensus 340 ~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~ 374 (492)
..=+.|++|..+|.+.+ .....+++.+.++.
T Consensus 109 --~~~D~v~~~~p~~~~~~--~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 109 --GKYDTWIMNPPFGSVVK--HSDRAFIDKAFETS 139 (200)
T ss_dssp --CCEEEEEECCCC---------CHHHHHHHHHHE
T ss_pred --CCeeEEEECCCchhccC--chhHHHHHHHHHhc
Confidence 11135666765554432 22345666554444
No 115
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=63.74 E-value=90 Score=32.12 Aligned_cols=95 Identities=18% Similarity=0.187 Sum_probs=59.9
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccccccc
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQL 341 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~l 341 (492)
-.|+|+|.+.|.-- ..||.+ + -+++||+.+.+.++.+.+++ +..|++.+| +..+.+++...
T Consensus 292 ~~VLDlgcG~G~~s----l~la~~--~---~~V~gvD~s~~ai~~A~~n~----~~ngl~v~~--~~~d~~~~~~~---- 352 (425)
T 2jjq_A 292 EKILDMYSGVGTFG----IYLAKR--G---FNVKGFDSNEFAIEMARRNV----EINNVDAEF--EVASDREVSVK---- 352 (425)
T ss_dssp SEEEEETCTTTHHH----HHHHHT--T---CEEEEEESCHHHHHHHHHHH----HHHTCCEEE--EECCTTTCCCT----
T ss_pred CEEEEeeccchHHH----HHHHHc--C---CEEEEEECCHHHHHHHHHHH----HHcCCcEEE--EECChHHcCcc----
Confidence 36899999988533 345554 2 38999999988787666554 445666444 34444443221
Q ss_pred cCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEe
Q 045494 342 RRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVE 382 (492)
Q Consensus 342 ~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvE 382 (492)
.=++|++|-. ..+..+.+++.++.|+|.-++.+.
T Consensus 353 -~fD~Vv~dPP------r~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 353 -GFDTVIVDPP------RAGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp -TCSEEEECCC------TTCSCHHHHHHHHHHCCSEEEEEE
T ss_pred -CCCEEEEcCC------ccchHHHHHHHHHhcCCCcEEEEE
Confidence 1235555421 123345789999999999988875
No 116
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=63.66 E-value=22 Score=31.44 Aligned_cols=101 Identities=8% Similarity=0.028 Sum_probs=55.4
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
.-.|+|+|.+.|.-...++. . ++ .++|||+.+...++.+.+++.+ .+..++|. ..+..++.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~---~-~~----~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~--~~d~~~~~----- 84 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFV---E-DG----YKTYGIEISDLQLKKAENFSRE----NNFKLNIS--KGDIRKLP----- 84 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHH---H-TT----CEEEEEECCHHHHHHHHHHHHH----HTCCCCEE--ECCTTSCC-----
T ss_pred CCEEEEECCCCCHHHHHHHH---h-CC----CEEEEEECCHHHHHHHHHHHHh----cCCceEEE--ECchhhCC-----
Confidence 35799999998865444432 2 22 4899999998877766655443 34334442 23333322
Q ss_pred ccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEEe
Q 045494 341 LRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLVE 382 (492)
Q Consensus 341 l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~PkvvvlvE 382 (492)
..++ +.|+++..+|.+. ......+|+. .+.|+|.-++++.
T Consensus 85 ~~~~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 85 FKDESMSFVYSYGTIFHMR--KNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp SCTTCEEEEEECSCGGGSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCceeEEEEcChHHhCC--HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 2222 2344443344331 1123455554 4778998766654
No 117
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=62.18 E-value=45 Score=31.10 Aligned_cols=50 Identities=20% Similarity=0.258 Sum_probs=34.6
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS 321 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp 321 (492)
+.-.|+|+|.|.|. +...||.+.. . +||||+.+...++.+.+++ +..++.
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~~---~-~v~gvDi~~~~~~~a~~n~----~~~~~~ 98 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRTK---A-KIVGVEIQERLADMAKRSV----AYNQLE 98 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTCC---C-EEEEECCSHHHHHHHHHHH----HHTTCT
T ss_pred CCCEEEEcCCchhH----HHHHHHHhcC---C-cEEEEECCHHHHHHHHHHH----HHCCCc
Confidence 35579999999984 4446676632 2 9999999887776665554 344554
No 118
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=61.98 E-value=18 Score=33.10 Aligned_cols=141 Identities=13% Similarity=0.122 Sum_probs=76.3
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASML 339 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l 339 (492)
+.-.|+|+|.+.|. +...|+.+. ..++|||+.+...++.+.+++...- +...+|. ..+..++.
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~--~~d~~~~~---- 141 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDITEDFLVQAKTYLGEEG---KRVRNYF--CCGLQDFT---- 141 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEE--ECCGGGCC----
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEE--EcChhhcC----
Confidence 35689999999885 444555543 2489999998877766655543221 1223343 23333322
Q ss_pred cccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE-eecCCCCCCChHHHHHHHHHHHHHHHHHHhhcCC
Q 045494 340 QLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV-EQEISHGGDDPNRHRVEHCLLYREINNILAIGGP 415 (492)
Q Consensus 340 ~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv-Eqea~hnsd~~eR~~iE~~~lgreI~NiVAcEG~ 415 (492)
..++ +.|+++..+|.+.+ .....+|+.+ +.|+|.-.+++ +..... . .+.. ..
T Consensus 142 -~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-~------------------~~~~--~~ 197 (241)
T 2ex4_A 142 -PEPDSYDVIWIQWVIGHLTD--QHLAEFLRRCKGSLRPNGIIVIKDNMAQE-G------------------VILD--DV 197 (241)
T ss_dssp -CCSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEEBSS-S------------------EEEE--TT
T ss_pred -CCCCCEEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEEEEccCCC-c------------------ceec--cc
Confidence 2222 34445544554422 1133566544 67899866655 443321 0 0010 00
Q ss_pred CcccccchhhHHHHHhccCCCeeccCC
Q 045494 416 ARSGEDKFKHWRSELARCNGFAQVPMS 442 (492)
Q Consensus 416 ~R~rhE~~~~Wr~rm~~~AGF~~v~lS 442 (492)
....+-+.+.|+..|.. +||+.+...
T Consensus 198 ~~~~~~~~~~~~~~l~~-aGf~~~~~~ 223 (241)
T 2ex4_A 198 DSSVCRDLDVVRRIICS-AGLSLLAEE 223 (241)
T ss_dssp TTEEEEBHHHHHHHHHH-TTCCEEEEE
T ss_pred CCcccCCHHHHHHHHHH-cCCeEEEee
Confidence 11112266789999999 999987653
No 119
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=61.60 E-value=38 Score=32.87 Aligned_cols=110 Identities=9% Similarity=-0.006 Sum_probs=60.5
Q ss_pred hHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeee
Q 045494 249 NQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPI 327 (492)
Q Consensus 249 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V 327 (492)
-..+++.+.-...-+|+|+|.|.|. +...|+.+ ++..-++|||+.+.+.++.+.+++ +..|++ .+|.
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~~~~~a~~~~----~~~g~~~v~~~-- 131 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEYSRKICEIAKRNV----ERLGIENVIFV-- 131 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEESCHHHHHHHHHHH----HHTTCCSEEEE--
T ss_pred HHHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEECCHHHHHHHHHHH----HHcCCCCeEEE--
Confidence 3456666655555689999998874 33444443 223468999999887776655554 344553 4443
Q ss_pred cccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEe
Q 045494 328 AKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVE 382 (492)
Q Consensus 328 ~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvE 382 (492)
..+..+..+. -.+=+.|+++..+|.+. + ...+.|+|.-.+++.
T Consensus 132 ~~d~~~~~~~---~~~fD~Iv~~~~~~~~~------~---~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 132 CGDGYYGVPE---FSPYDVIFVTVGVDEVP------E---TWFTQLKEGGRVIVP 174 (317)
T ss_dssp ESCGGGCCGG---GCCEEEEEECSBBSCCC------H---HHHHHEEEEEEEEEE
T ss_pred ECChhhcccc---CCCeEEEEEcCCHHHHH------H---HHHHhcCCCcEEEEE
Confidence 2333331111 01113455554444332 2 345678888766653
No 120
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=61.59 E-value=30 Score=33.59 Aligned_cols=99 Identities=14% Similarity=0.115 Sum_probs=57.3
Q ss_pred HHhcCCccchhh-hhhhH----HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHH
Q 045494 234 FNNVSPFIKFAH-FTSNQ----AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETG 308 (492)
Q Consensus 234 f~e~sP~~kfa~-ftANq----AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg 308 (492)
-+.+.|=-+++. |..|+ .|++++.-... +|+|+|.|.|. |-..|+.+. -++|||+.+.+.++.+.
T Consensus 16 ~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid~~~~~~l~ 85 (271)
T 3fut_A 16 RHGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKDLRLRPVLE 85 (271)
T ss_dssp HTTCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESCGGGHHHHH
T ss_pred hcCCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECCHHHHHHHH
Confidence 344556556664 44444 45555554556 99999999886 566677663 37999998877666555
Q ss_pred HHHHHHHHHhCCceEEeeecccccccccccccccCCCeEEEeec
Q 045494 309 KQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLRRGETLAVHWL 352 (492)
Q Consensus 309 ~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~l~~gEaLaVn~~ 352 (492)
+++. +-. +..+..+..+++...+ .....|+-|..
T Consensus 86 ~~~~------~~~--v~vi~~D~l~~~~~~~--~~~~~iv~NlP 119 (271)
T 3fut_A 86 ETLS------GLP--VRLVFQDALLYPWEEV--PQGSLLVANLP 119 (271)
T ss_dssp HHTT------TSS--EEEEESCGGGSCGGGS--CTTEEEEEEEC
T ss_pred HhcC------CCC--EEEEECChhhCChhhc--cCccEEEecCc
Confidence 5443 112 3344455544443322 12235666754
No 121
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=61.18 E-value=31 Score=30.17 Aligned_cols=34 Identities=21% Similarity=0.347 Sum_probs=26.1
Q ss_pred EEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHH
Q 045494 263 HIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLE 306 (492)
Q Consensus 263 HIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~e 306 (492)
.|+|+|.|.|. +...|+.+. ++|||+.+...++.
T Consensus 26 ~vLD~GcG~G~----~~~~l~~~~------~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 26 IVLDLGTSTGV----ITEQLRKRN------TVVSTDLNIRALES 59 (170)
T ss_dssp EEEEETCTTCH----HHHHHTTTS------EEEEEESCHHHHHT
T ss_pred eEEEeccCccH----HHHHHHhcC------cEEEEECCHHHHhc
Confidence 89999999984 555566552 99999998776654
No 122
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=60.17 E-value=11 Score=31.45 Aligned_cols=39 Identities=23% Similarity=0.316 Sum_probs=32.8
Q ss_pred CCCCeEEEeecCCCH----HHHHHHHHHHHHHHHHhCCceEEe
Q 045494 287 EGPPHLRMTGMGTSM----EVLLETGKQLFNFAKRLGLSFEFH 325 (492)
Q Consensus 287 gGPP~LRITgI~~~~----~~L~etg~rL~~fA~slgvpFeF~ 325 (492)
=|||.-|||...++. ..|+++-+.+.+..++.|..|+|+
T Consensus 49 vgaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 49 IGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp SSTTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred EcCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 378888888887763 368899999999999999999985
No 123
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=59.72 E-value=26 Score=31.92 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=30.3
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQ 310 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~r 310 (492)
.-+|+|+|.+.|. +...|+.+ | .++|||+.+...++.+.++
T Consensus 49 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 49 QTRVLEAGCGHGP----DAARFGPQ--A---ARWAAYDFSPELLKLARAN 89 (226)
T ss_dssp TCEEEEESCTTSH----HHHHHGGG--S---SEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEeCCCCCH----HHHHHHHc--C---CEEEEEECCHHHHHHHHHh
Confidence 3479999999987 55566665 2 4899999987777665554
No 124
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=58.60 E-value=18 Score=33.28 Aligned_cols=45 Identities=16% Similarity=-0.006 Sum_probs=30.9
Q ss_pred CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 045494 259 RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQL 311 (492)
Q Consensus 259 ~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL 311 (492)
.+.-.|+|+|.|.|.-=. .|+.+ ++ .++|||+.+...++.+.+++
T Consensus 55 ~~~~~vLDlGcG~G~~~~----~l~~~--~~--~~v~gvD~s~~~l~~a~~~~ 99 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQL----LSACE--SF--TEIIVSDYTDQNLWELQKWL 99 (265)
T ss_dssp CCEEEEEEESCTTCCGGG----TTGGG--TE--EEEEEEESCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHH----HHhhc--cc--CeEEEecCCHHHHHHHHHHH
Confidence 456789999999885321 23322 22 68999999888777766655
No 125
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=58.59 E-value=33 Score=32.57 Aligned_cols=50 Identities=12% Similarity=0.146 Sum_probs=34.4
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHH
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLET 307 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~et 307 (492)
..|++++.-...-+|+|+|.|.|. |-..|+.++ .-++|||+.+...++.+
T Consensus 21 ~~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEid~~~~~~~ 70 (249)
T 3ftd_A 21 KKIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIELDREMVENL 70 (249)
T ss_dssp HHHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECCCHHHHHHH
T ss_pred HHHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEECCHHHHHHH
Confidence 345555554455689999999775 667777762 35899999886655443
No 126
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=58.47 E-value=19 Score=32.07 Aligned_cols=110 Identities=9% Similarity=0.038 Sum_probs=60.3
Q ss_pred hhhhHHHHhhhc--cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-e
Q 045494 246 FTSNQAILEAFH--RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-F 322 (492)
Q Consensus 246 ftANqAILEA~~--g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-F 322 (492)
....+.+++.+. -.+.-.|+|+|.|.|. +...|+.+ +..++|||+.+...++.+.+++ +..+++ +
T Consensus 44 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~----~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~v 111 (205)
T 3grz_A 44 HQTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKL----GAKSVLATDISDESMTAAEENA----ALNGIYDI 111 (205)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHT----TCSEEEEEESCHHHHHHHHHHH----HHTTCCCC
T ss_pred CccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHC----CCCEEEEEECCHHHHHHHHHHH----HHcCCCce
Confidence 344455666665 2345689999999984 33346654 2358999999877776555544 345654 4
Q ss_pred EEeeecccccccccccccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE
Q 045494 323 EFHPIAKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 323 eF~~V~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
+|. ..+..+.... .=+.|++|...|. ...+|+.+ +.|+|.-.+++
T Consensus 112 ~~~--~~d~~~~~~~-----~fD~i~~~~~~~~-------~~~~l~~~~~~L~~gG~l~~ 157 (205)
T 3grz_A 112 ALQ--KTSLLADVDG-----KFDLIVANILAEI-------LLDLIPQLDSHLNEDGQVIF 157 (205)
T ss_dssp EEE--ESSTTTTCCS-----CEEEEEEESCHHH-------HHHHGGGSGGGEEEEEEEEE
T ss_pred EEE--eccccccCCC-----CceEEEECCcHHH-------HHHHHHHHHHhcCCCCEEEE
Confidence 443 2333221111 1123445544332 13444433 55788766554
No 127
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=58.34 E-value=25 Score=33.04 Aligned_cols=95 Identities=19% Similarity=0.172 Sum_probs=53.1
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
.-.|+|+|.|.|. +...++.+ |+ ++|||+.+...++.+.+++ +..|+.++|. ..+..+. +.
T Consensus 121 ~~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~~~~v~~a~~n~----~~~~~~v~~~--~~d~~~~----~~ 181 (254)
T 2nxc_A 121 GDKVLDLGTGSGV----LAIAAEKL--GG---KALGVDIDPMVLPQAEANA----KRNGVRPRFL--EGSLEAA----LP 181 (254)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCGGGHHHHHHHH----HHTTCCCEEE--ESCHHHH----GG
T ss_pred CCEEEEecCCCcH----HHHHHHHh--CC---eEEEEECCHHHHHHHHHHH----HHcCCcEEEE--ECChhhc----Cc
Confidence 3479999999886 33345554 43 9999998877776665544 3456654442 2222221 11
Q ss_pred ccCCCeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEE
Q 045494 341 LRRGETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLV 381 (492)
Q Consensus 341 l~~gEaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~Pkvvvlv 381 (492)
-.+=+.|++|...|. ...++. ..+.|+|.-.+++
T Consensus 182 ~~~fD~Vv~n~~~~~-------~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 182 FGPFDLLVANLYAEL-------HAALAPRYREALVPGGRALL 216 (254)
T ss_dssp GCCEEEEEEECCHHH-------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCEEEECCcHHH-------HHHHHHHHHHHcCCCCEEEE
Confidence 011134556654432 234444 4466888766654
No 128
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=58.06 E-value=18 Score=31.18 Aligned_cols=114 Identities=12% Similarity=0.005 Sum_probs=64.7
Q ss_pred hhHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc---eEE
Q 045494 248 SNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS---FEF 324 (492)
Q Consensus 248 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp---FeF 324 (492)
..+.+++.+.-.+.-+|+|+|.+.|. +...|+.+ + .++||++.+...++.+.+++ +..+++ ++|
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-~----~~v~~~D~~~~~~~~a~~~~----~~~~~~~~~~~~ 106 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGV----IGIALADE-V----KSTTMADINRRAIKLAKENI----KLNNLDNYDIRV 106 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-S----SEEEEEESCHHHHHHHHHHH----HHTTCTTSCEEE
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-C----CeEEEEECCHHHHHHHHHHH----HHcCCCccceEE
Confidence 44667777765566789999999884 34455555 2 48999999877776655544 344654 555
Q ss_pred eeecccccccccccccccCCCeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEEee
Q 045494 325 HPIAKKFGDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLVEQ 383 (492)
Q Consensus 325 ~~V~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~PkvvvlvEq 383 (492)
. ..+..+..+ -..=+.|++|..+|. .......+|+. .+.|+|.-.+++..
T Consensus 107 ~--~~d~~~~~~----~~~~D~v~~~~~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 107 V--HSDLYENVK----DRKYNKIITNPPIRA---GKEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp E--ECSTTTTCT----TSCEEEEEECCCSTT---CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred E--ECchhcccc----cCCceEEEECCCccc---chhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 3 233322111 011134555554442 11123455554 46789987766653
No 129
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=57.32 E-value=84 Score=32.14 Aligned_cols=108 Identities=15% Similarity=0.137 Sum_probs=62.0
Q ss_pred HhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeecccc
Q 045494 253 LEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIAKKF 331 (492)
Q Consensus 253 LEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~~~~ 331 (492)
++.+.-...-.|+|+|.|.|.--. .||.+ + -+++||+.+.+.++.+.+++ +..|++ .+|. ..+.
T Consensus 279 ~~~l~~~~~~~VLDlgcG~G~~~~----~la~~-~----~~V~gvD~s~~al~~A~~n~----~~~~~~~v~f~--~~d~ 343 (433)
T 1uwv_A 279 LEWLDVQPEDRVLDLFCGMGNFTL----PLATQ-A----ASVVGVEGVPALVEKGQQNA----RLNGLQNVTFY--HENL 343 (433)
T ss_dssp HHHHTCCTTCEEEEESCTTTTTHH----HHHTT-S----SEEEEEESCHHHHHHHHHHH----HHTTCCSEEEE--ECCT
T ss_pred HHhhcCCCCCEEEECCCCCCHHHH----HHHhh-C----CEEEEEeCCHHHHHHHHHHH----HHcCCCceEEE--ECCH
Confidence 344433334479999999886443 34544 2 48999999988787666554 445664 5553 3334
Q ss_pred cc-cccccccccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEe
Q 045494 332 GD-IDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVE 382 (492)
Q Consensus 332 ee-l~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvE 382 (492)
++ +....+.-..=+.|++|-. ..+ ...+++.+..++|+.++.+.
T Consensus 344 ~~~l~~~~~~~~~fD~Vv~dPP------r~g-~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 344 EEDVTKQPWAKNGFDKVLLDPA------RAG-AAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp TSCCSSSGGGTTCCSEEEECCC------TTC-CHHHHHHHHHHCCSEEEEEE
T ss_pred HHHhhhhhhhcCCCCEEEECCC------Ccc-HHHHHHHHHhcCCCeEEEEE
Confidence 33 1110011111135555521 111 34688999999999988764
No 130
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=57.26 E-value=19 Score=36.81 Aligned_cols=100 Identities=13% Similarity=0.196 Sum_probs=56.3
Q ss_pred EEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccccc
Q 045494 263 HIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLR 342 (492)
Q Consensus 263 HIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~l~ 342 (492)
+|+|+|.|.|. -++ +|.|.|. -+++||+.+. .+ ....+.++.-|+.=....|..++++++...
T Consensus 86 ~VLDvG~GtGi--Ls~---~Aa~aGA---~~V~ave~s~-~~----~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe---- 148 (376)
T 4hc4_A 86 TVLDVGAGTGI--LSI---FCAQAGA---RRVYAVEASA-IW----QQAREVVRFNGLEDRVHVLPGPVETVELPE---- 148 (376)
T ss_dssp EEEEETCTTSH--HHH---HHHHTTC---SEEEEEECST-TH----HHHHHHHHHTTCTTTEEEEESCTTTCCCSS----
T ss_pred EEEEeCCCccH--HHH---HHHHhCC---CEEEEEeChH-HH----HHHHHHHHHcCCCceEEEEeeeeeeecCCc----
Confidence 58999998882 344 4445443 2789998763 22 223344555666544444656666654210
Q ss_pred CCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEE
Q 045494 343 RGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTL 380 (492)
Q Consensus 343 ~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvl 380 (492)
+=..|+.+++-+.|+.. +..+.++... |-|+|.-+++
T Consensus 149 ~~DvivsE~~~~~l~~e-~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 149 QVDAIVSEWMGYGLLHE-SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CEEEEECCCCBTTBTTT-CSHHHHHHHHHHHEEEEEEEE
T ss_pred cccEEEeeccccccccc-chhhhHHHHHHhhCCCCceEC
Confidence 01123334554444333 3467777766 6788887765
No 131
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=56.98 E-value=37 Score=32.55 Aligned_cols=53 Identities=15% Similarity=0.160 Sum_probs=37.6
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
.|++++.-...-+|+|+|.|.|. |-..|+.+. -++|||+.+.+.++.+.+++.
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~-----~~V~avEid~~~~~~~~~~~~ 72 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC-----DNLALVEIDRDLVAFLQKKYN 72 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS-----SEEEEEECCHHHHHHHHHHHT
T ss_pred HHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC-----CEEEEEECCHHHHHHHHHHHh
Confidence 46666655556689999999987 455666652 389999998877766655553
No 132
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=56.96 E-value=50 Score=30.50 Aligned_cols=48 Identities=19% Similarity=0.185 Sum_probs=34.2
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNF 314 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~f 314 (492)
+.-.|+|+|.|.|.- ...||.+. |..++|||+.+...++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G~~----~~~la~~~---~~~~v~gvD~s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGGL----MIDLSPAF---PEDLILGMEIRVQVTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSHH----HHHHHHHS---TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHH----HHHHHHhC---CCCCEEEEEcCHHHHHHHHHHHHHH
Confidence 456899999999863 33344332 3569999999988887777766554
No 133
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=56.37 E-value=38 Score=31.44 Aligned_cols=94 Identities=17% Similarity=0.178 Sum_probs=52.7
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASML 339 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l 339 (492)
+.-.|+|+|.+.|. +...|+.+ | .++|||+.+...++.+.++.. +. | +..+.+++.
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~l~~a~~~~~------~~---~--~~~d~~~~~---- 109 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER--G---FEVVLVDPSKEMLEVAREKGV------KN---V--VEAKAEDLP---- 109 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT--T---CEEEEEESCHHHHHHHHHHTC------SC---E--EECCTTSCC----
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc--C---CeEEEEeCCHHHHHHHHhhcC------CC---E--EECcHHHCC----
Confidence 45589999999886 44455655 2 489999998776665544422 11 2 222333322
Q ss_pred cccCC--CeEEEee-ccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 340 QLRRG--ETLAVHW-LQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 340 ~l~~g--EaLaVn~-~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
..++ +.|+++. ++|...+ ...+|+.+ +-|+|.-.+++.
T Consensus 110 -~~~~~fD~v~~~~~~~~~~~~----~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 110 -FPSGAFEAVLALGDVLSYVEN----KDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp -SCTTCEEEEEECSSHHHHCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCCCEEEEEEcchhhhcccc----HHHHHHHHHHHcCCCeEEEEE
Confidence 2222 2333332 4454322 45566554 778998766654
No 134
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=56.28 E-value=24 Score=31.39 Aligned_cols=99 Identities=10% Similarity=0.041 Sum_probs=53.1
Q ss_pred HHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccc
Q 045494 252 ILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKF 331 (492)
Q Consensus 252 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~ 331 (492)
+++.+.. +.-.|+|+|.+.|. +...| +. -++|||+.+...++.+.+++ -++ +| +..+.
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~----~~~~l----~~---~~v~~vD~s~~~~~~a~~~~------~~~--~~--~~~d~ 86 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGY----WLRRL----PY---PQKVGVEPSEAMLAVGRRRA------PEA--TW--VRAWG 86 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCH----HHHHC----CC---SEEEEECCCHHHHHHHHHHC------TTS--EE--ECCCT
T ss_pred HHHHhcC-CCCeEEEECCCCCH----hHHhC----CC---CeEEEEeCCHHHHHHHHHhC------CCc--EE--EEccc
Confidence 4444433 55589999999885 22333 11 28999999877666555544 123 33 22233
Q ss_pred cccccccccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEE
Q 045494 332 GDIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLV 381 (492)
Q Consensus 332 eel~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~Pkvvvlv 381 (492)
+++ ...++ +.|+++..+|.+. . ...+|+. .+-|+|.-.+++
T Consensus 87 ~~~-----~~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 87 EAL-----PFPGESFDVVLLFTTLEFVE---D-VERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp TSC-----CSCSSCEEEEEEESCTTTCS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred ccC-----CCCCCcEEEEEEcChhhhcC---C-HHHHHHHHHHHcCCCCEEEE
Confidence 332 22222 2344444444432 2 3455554 477899865554
No 135
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=55.90 E-value=20 Score=35.86 Aligned_cols=113 Identities=9% Similarity=-0.050 Sum_probs=63.1
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHh-CCceEEeeecccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRL-GLSFEFHPIAKKFGDIDASML 339 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~sl-gvpFeF~~V~~~~eel~~~~l 339 (492)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+...++.+.+++..++..+ +-.++|. ..+..+.-.
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~---~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~--~~D~~~~l~--- 188 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARH---ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV--IGDGVAFLK--- 188 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTC---TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE--ESCHHHHHH---
T ss_pred CCEEEEECCCccH----HHHHHHHc---CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE--ECCHHHHHH---
Confidence 3489999999886 45556655 345799999999888888887776664433 1234443 222222100
Q ss_pred cccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEeecC
Q 045494 340 QLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVEQEI 385 (492)
Q Consensus 340 ~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvEqea 385 (492)
...++ +.|+++...+.-....-....+++.+ +.|+|.-++++.-+.
T Consensus 189 ~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 189 NAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp TSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred hccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 01112 34555543111000000124566544 789999988886444
No 136
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=55.61 E-value=46 Score=32.00 Aligned_cols=53 Identities=11% Similarity=0.149 Sum_probs=35.5
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQL 311 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL 311 (492)
+.|++++.-...-+|+|+|.|.|.--..|.+ + + -++|||+.+...++.+.+++
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~----~--~---~~v~~vD~~~~~~~~a~~~~ 70 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLE----K--A---KKVVACELDPRLVAELHKRV 70 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHH----H--S---SEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHh----h--C---CEEEEEECCHHHHHHHHHHH
Confidence 3455555444556899999999986655554 3 2 28999998877665555443
No 137
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=54.65 E-value=53 Score=31.89 Aligned_cols=54 Identities=11% Similarity=0.063 Sum_probs=36.7
Q ss_pred hHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 045494 249 NQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQL 311 (492)
Q Consensus 249 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL 311 (492)
.+.|++++.-...-.|+|+|.|.|.-- ..|+.+ + -++|||+.+...++.+.+++
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~lt----~~La~~-~----~~v~~vDi~~~~~~~a~~~~ 84 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGNLT----VKLLPL-A----KKVITIDIDSRMISEVKKRC 84 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTH----HHHTTT-S----SEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcHHH----HHHHhc-C----CEEEEEECCHHHHHHHHHHH
Confidence 345556655444558999999999744 445555 2 38999999887776665554
No 138
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=53.67 E-value=24 Score=30.31 Aligned_cols=54 Identities=19% Similarity=0.068 Sum_probs=35.7
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
..+++.+.-.+.-+|+|+|.+.|. +...|+.+. .++||++.+...++.+.+++.
T Consensus 23 ~~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~~~~~~~a~~~~~ 76 (192)
T 1l3i_A 23 CLIMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRNPEAISTTEMNLQ 76 (192)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECCHHHHHHHHHHHH
Confidence 345555554555689999998874 334455443 589999998877766655543
No 139
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=52.76 E-value=39 Score=33.34 Aligned_cols=110 Identities=15% Similarity=0.081 Sum_probs=56.4
Q ss_pred HHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeeccc
Q 045494 252 ILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIAKK 330 (492)
Q Consensus 252 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~~~ 330 (492)
++....-...-.|+|.|.|.|. +.-.+|.+. .|..+|+|++.+...++.+.+++ +..|++ .+| +..+
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~----~~ie~a~~~--~~~~~v~g~Di~~~~i~~a~~n~----~~~g~~~i~~--~~~D 262 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGT----IALEAASTL--GPTSPVYAGDLDEKRLGLAREAA----LASGLSWIRF--LRAD 262 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSH----HHHHHHHHH--CTTSCEEEEESCHHHHHHHHHHH----HHTTCTTCEE--EECC
T ss_pred HHHHhCCCCCCEEEeCCCCcCH----HHHHHHHhh--CCCceEEEEECCHHHHHHHHHHH----HHcCCCceEE--EeCC
Confidence 3343333344579999999985 333333332 14578999999888777665554 445664 333 3333
Q ss_pred ccccccccccccCCCeEEEeeccccccCCCCc----cHHHHHHH-HhcCCc
Q 045494 331 FGDIDASMLQLRRGETLAVHWLQHSLYDATGP----DWKTLRLL-EELSPR 376 (492)
Q Consensus 331 ~eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~----~~~~L~~I-r~L~Pk 376 (492)
..++... ...-..|++|...+........ ...+++.+ +.|+|.
T Consensus 263 ~~~~~~~---~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 263 ARHLPRF---FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp GGGGGGT---CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTT
T ss_pred hhhCccc---cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCC
Confidence 4333211 1111567777543221111111 13456544 456674
No 140
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=52.71 E-value=79 Score=28.91 Aligned_cols=57 Identities=12% Similarity=0.004 Sum_probs=37.0
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFN 313 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~ 313 (492)
.|++.+.-...-.|+|+|.+.|.--..|.+.+ .|..++++++.+.+.++.+.+++..
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~------~~~~~v~~~D~~~~~~~~a~~~~~~ 140 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIV------GPEGRVVSYEIREDFAKLAWENIKW 140 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHh------CCCeEEEEEecCHHHHHHHHHHHHH
Confidence 44555544455579999999985444443333 1346899999988777766655543
No 141
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=52.18 E-value=24 Score=31.55 Aligned_cols=57 Identities=9% Similarity=0.096 Sum_probs=38.4
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFN 313 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~ 313 (492)
.+++.+.-...-.|+|+|.+.|.--..|.+.. .|.-++|+|+.+...++.+.+++..
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~~~~~~~~a~~~~~~ 124 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIERIPELAEKAERTLRK 124 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 45555554555689999999886555555443 2345899999988777666655543
No 142
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=52.03 E-value=33 Score=31.64 Aligned_cols=110 Identities=12% Similarity=0.107 Sum_probs=59.0
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeeccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIAKKFGDIDASM 338 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~~~~eel~~~~ 338 (492)
+.-.|+|+|.|.|.-. ..||.+. |..+++||+.+...+..+.++ ++..|++ ++| +..+..++-+..
T Consensus 34 ~~~~vLDiGcG~G~~~----~~lA~~~---p~~~v~giD~s~~~l~~a~~~----~~~~~l~nv~~--~~~Da~~~l~~~ 100 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASL----VAMAKDR---PEQDFLGIEVHSPGVGACLAS----AHEEGLSNLRV--MCHDAVEVLHKM 100 (218)
T ss_dssp CCCEEEEESCTTCHHH----HHHHHHC---TTSEEEEECSCHHHHHHHHHH----HHHTTCSSEEE--ECSCHHHHHHHH
T ss_pred CCCeEEEEeeeChHHH----HHHHHHC---CCCeEEEEEecHHHHHHHHHH----HHHhCCCcEEE--EECCHHHHHHHH
Confidence 4457999999998543 3344332 447899999988777655544 4455653 444 333333321100
Q ss_pred ccccCC--CeEEEeec--cccccC--CCCccHHHHHHH-HhcCCcEEEEEeec
Q 045494 339 LQLRRG--ETLAVHWL--QHSLYD--ATGPDWKTLRLL-EELSPRVVTLVEQE 384 (492)
Q Consensus 339 l~l~~g--EaLaVn~~--lh~L~~--~~~~~~~~L~~I-r~L~PkvvvlvEqe 384 (492)
+.++ +.|.+|+. .+.... ..-....+|+.+ +.|+|.-++++.-+
T Consensus 101 --~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 101 --IPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp --SCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred --cCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 1222 23445532 111000 000113577766 55999999887644
No 143
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=51.71 E-value=26 Score=32.03 Aligned_cols=103 Identities=15% Similarity=0.049 Sum_probs=55.4
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeecccccccccc-ccc
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDAS-MLQ 340 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~-~l~ 340 (492)
-.|+|+|.+.|. +...|+.+ ++ ++|||+.+...++.+.+++ . .-..+|. ..+..++... .+.
T Consensus 58 ~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s~~~~~~a~~~~----~--~~~~~~~--~~d~~~~~~~~~~~ 120 (245)
T 3ggd_A 58 LPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVSKSALEIAAKEN----T--AANISYR--LLDGLVPEQAAQIH 120 (245)
T ss_dssp SCEEEETCTTSH----HHHHHHHH--SS---CEEEEESCHHHHHHHHHHS----C--CTTEEEE--ECCTTCHHHHHHHH
T ss_pred CeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECCHHHHHHHHHhC----c--ccCceEE--ECcccccccccccc
Confidence 459999999884 44445543 33 8999999877776655544 1 1133442 2333332211 010
Q ss_pred c-cCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEE-EEEee
Q 045494 341 L-RRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVV-TLVEQ 383 (492)
Q Consensus 341 l-~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvv-vlvEq 383 (492)
- .+-.+|..+..+|.+.. .....+|+.+ +.|+|.-. +++|.
T Consensus 121 ~~~~~d~v~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 121 SEIGDANIYMRTGFHHIPV--EKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHCSCEEEEESSSTTSCG--GGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cccCccEEEEcchhhcCCH--HHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 0 01235555655665421 1245566544 67899764 56564
No 144
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=51.57 E-value=22 Score=32.96 Aligned_cols=56 Identities=16% Similarity=0.102 Sum_probs=37.5
Q ss_pred HHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 252 ILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 252 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
+++.+.+.....|+|+|.+.|. +.-.|+.+.. .|..+||||+.+...++.+.+++.
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~~-~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGY----LLTVLGLLHR-RSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSH----HHHHHHHHTG-GGEEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHhcccCCCCeEEECCCCCCH----HHHHHHHHhc-cCCCeEEEEECCHHHHHHHHHHHH
Confidence 3444444567899999999994 3344443311 135799999998887777766554
No 145
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=51.47 E-value=11 Score=33.31 Aligned_cols=55 Identities=18% Similarity=0.213 Sum_probs=29.0
Q ss_pred HHHhhhcc-CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 251 AILEAFHR-RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 251 AILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
.+++.+.. .+.-.|+|+|.|.|.--. .|+.+. |..++|||+.+...++.+.+++.
T Consensus 20 ~~~~~l~~~~~~~~vLDiG~G~G~~~~----~l~~~~---~~~~v~~vD~~~~~~~~a~~~~~ 75 (215)
T 4dzr_A 20 EAIRFLKRMPSGTRVIDVGTGSGCIAV----SIALAC---PGVSVTAVDLSMDALAVARRNAE 75 (215)
T ss_dssp HHHHHHTTCCTTEEEEEEESSBCHHHH----HHHHHC---TTEEEEEEECC------------
T ss_pred HHHHHhhhcCCCCEEEEecCCHhHHHH----HHHHhC---CCCeEEEEECCHHHHHHHHHHHH
Confidence 34455544 567799999999996333 333332 45799999988776766555543
No 146
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=50.68 E-value=75 Score=29.79 Aligned_cols=56 Identities=16% Similarity=0.094 Sum_probs=34.9
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
.|++.+.-...-.|+|+|.+.|.- ...|+.+-+ |..++|+++.+.+.++.+.+++.
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~----~~~la~~~~--~~~~v~~vD~s~~~~~~a~~~~~ 158 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAM----CAVLARAVG--SSGKVFAYEKREEFAKLAESNLT 158 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHH----HHHHHHHTT--TTCEEEEECCCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEEECCcCCHH----HHHHHHHhC--CCcEEEEEECCHHHHHHHHHHHH
Confidence 344444433445799999998853 333443321 33599999998877766655543
No 147
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=50.34 E-value=31 Score=32.43 Aligned_cols=47 Identities=15% Similarity=-0.019 Sum_probs=31.5
Q ss_pred cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 258 RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 258 g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
..+.-+|+|+|.|.|+. + ++ ++ +.+ --+|||++.+...++.+.+++.
T Consensus 53 ~~~g~~vLDiGCG~G~~-~-~~--~~-~~~---~~~v~g~D~s~~~l~~a~~~~~ 99 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIY-Q-VL--AA-CDS---FQDITLSDFTDRNREELEKWLK 99 (263)
T ss_dssp SCCEEEEEESSCTTCCG-G-GT--TG-GGT---EEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHH-H-HH--HH-Hhh---hcceeeccccHHHHHHHHHHHh
Confidence 34567899999999852 1 11 11 211 1379999999888887777653
No 148
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=50.19 E-value=34 Score=33.27 Aligned_cols=110 Identities=6% Similarity=-0.064 Sum_probs=59.8
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEeeeccccccccccccc
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~V~~~~eel~~~~l~ 340 (492)
-.|+|+|.|.|. +...|+.+ +|..+||+|+.+...++.+.+++...+..++- .++|. ..+..++.. .
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D~~~~~~---~ 164 (304)
T 3bwc_A 97 ERVLIIGGGDGG----VLREVLRH---GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR--VGDGLAFVR---Q 164 (304)
T ss_dssp CEEEEEECTTSH----HHHHHHTC---TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHHHHHH---S
T ss_pred CeEEEEcCCCCH----HHHHHHhC---CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHHHHHH---h
Confidence 479999999885 45556554 34579999999988888777777665554322 24442 222222110 0
Q ss_pred ccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEee
Q 045494 341 LRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVEQ 383 (492)
Q Consensus 341 l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvEq 383 (492)
..++ +.|+++...+......--...+++.+ +.|+|.-++++..
T Consensus 165 ~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 165 TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 0111 34555643322111000014566554 7899988877753
No 149
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=50.04 E-value=39 Score=31.83 Aligned_cols=116 Identities=13% Similarity=-0.036 Sum_probs=60.0
Q ss_pred CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeeccccccccc
Q 045494 259 RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIAKKFGDIDA 336 (492)
Q Consensus 259 ~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~~~~eel~~ 336 (492)
.+.-.|+|+|.+.|.- ...|+.+. |..+||||+.+...++.+.+++...+. .|+. ++| +..++.++..
T Consensus 35 ~~~~~VLDlG~G~G~~----~l~la~~~---~~~~v~gvDi~~~~~~~a~~n~~~~~~-~~l~~~v~~--~~~D~~~~~~ 104 (260)
T 2ozv_A 35 DRACRIADLGAGAGAA----GMAVAARL---EKAEVTLYERSQEMAEFARRSLELPDN-AAFSARIEV--LEADVTLRAK 104 (260)
T ss_dssp CSCEEEEECCSSSSHH----HHHHHHHC---TTEEEEEEESSHHHHHHHHHHTTSGGG-TTTGGGEEE--EECCTTCCHH
T ss_pred cCCCEEEEeCChHhHH----HHHHHHhC---CCCeEEEEECCHHHHHHHHHHHHhhhh-CCCcceEEE--EeCCHHHHhh
Confidence 3456899999999863 23344442 348999999988777666655433111 3443 333 3344443311
Q ss_pred ccc--cccCC--CeEEEeeccccc--------------cCCCCccHHHHHH-HHhcCCcEEEEEeec
Q 045494 337 SML--QLRRG--ETLAVHWLQHSL--------------YDATGPDWKTLRL-LEELSPRVVTLVEQE 384 (492)
Q Consensus 337 ~~l--~l~~g--EaLaVn~~lh~L--------------~~~~~~~~~~L~~-Ir~L~PkvvvlvEqe 384 (492)
..+ .+.++ +.|++|-..+.. .......+.+++. .+-|+|.-.+++...
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 000 01122 346666322111 0111234566654 467899877776543
No 150
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=48.84 E-value=39 Score=30.76 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=53.9
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeecccccccccccc
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIAKKFGDIDASML 339 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~~~~eel~~~~l 339 (492)
-.|+|+|.+.|.-=.. |+.+. |..++|+|+.+...++.+.+++ +..|+. ++|. ..+..+..+. +
T Consensus 56 ~~vLdiG~G~G~~~~~----la~~~---~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~v~~~--~~d~~~~~~~-~ 121 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIR----MAQAL---PEATIVSIERDERRYEEAHKHV----KALGLESRIELL--FGDALQLGEK-L 121 (233)
T ss_dssp SEEEEECCTTSHHHHH----HHHHC---TTCEEEEECCCHHHHHHHHHHH----HHTTCTTTEEEE--CSCGGGSHHH-H
T ss_pred CEEEEecCCCcHHHHH----HHHHC---CCCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEE--ECCHHHHHHh-c
Confidence 4799999998854333 33332 2369999999887776655554 344552 4443 2222221110 0
Q ss_pred cccCC--CeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEe
Q 045494 340 QLRRG--ETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVE 382 (492)
Q Consensus 340 ~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvE 382 (492)
..++ +.|.++...+ ....+|+ ..+.|+|.-+++++
T Consensus 122 -~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 122 -ELYPLFDVLFIDAAKG-------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp -TTSCCEEEEEEEGGGS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred -ccCCCccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 0012 2344443322 2345554 44778999888875
No 151
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=48.63 E-value=22 Score=33.60 Aligned_cols=101 Identities=14% Similarity=0.092 Sum_probs=55.8
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeeccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIAKKFGDIDASM 338 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~~~~eel~~~~ 338 (492)
..-+|+|+|.|.|.--..|-+. . |..++|+|+.+...++.+.++ ++.+|+. .+| +..+.+++....
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~---~----~~~~v~~vD~s~~~~~~a~~~----~~~~~l~~v~~--~~~d~~~~~~~~ 146 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIV---R----PELELVLVDATRKKVAFVERA----IEVLGLKGARA--LWGRAEVLAREA 146 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHH---C----TTCEEEEEESCHHHHHHHHHH----HHHHTCSSEEE--EECCHHHHTTST
T ss_pred CCCEEEEEcCCCCHHHHHHHHH---C----CCCEEEEEECCHHHHHHHHHH----HHHhCCCceEE--EECcHHHhhccc
Confidence 4458999999999754433332 2 447999999988777655444 4556774 444 334444432210
Q ss_pred ccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEE
Q 045494 339 LQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLV 381 (492)
Q Consensus 339 l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~Pkvvvlv 381 (492)
..-.+=+.|+.+.+ .+.+.++..+ +-|+|.-..++
T Consensus 147 ~~~~~fD~I~s~a~--------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 147 GHREAYARAVARAV--------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp TTTTCEEEEEEESS--------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred ccCCCceEEEECCc--------CCHHHHHHHHHHHcCCCeEEEE
Confidence 00001122333321 2345677655 67888876654
No 152
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=47.99 E-value=50 Score=29.61 Aligned_cols=98 Identities=18% Similarity=0.189 Sum_probs=52.6
Q ss_pred CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccc
Q 045494 259 RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASM 338 (492)
Q Consensus 259 ~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~ 338 (492)
.+.-.|+|+|.+.|.--. .|+.+ ++ ++|||+.+...++.+.+++ -+ .+|. ..+..++.
T Consensus 39 ~~~~~vLdiG~G~G~~~~----~l~~~--~~---~v~~~D~s~~~~~~a~~~~------~~--~~~~--~~d~~~~~--- 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLE----HFTKE--FG---DTAGLELSEDMLTHARKRL------PD--ATLH--QGDMRDFR--- 96 (239)
T ss_dssp TTCCEEEEETCTTSHHHH----HHHHH--HS---EEEEEESCHHHHHHHHHHC------TT--CEEE--ECCTTTCC---
T ss_pred CCCCeEEEecccCCHHHH----HHHHh--CC---cEEEEeCCHHHHHHHHHhC------CC--CEEE--ECCHHHcc---
Confidence 345689999999986433 33333 22 8999999877666554442 12 3332 22333321
Q ss_pred ccccCCCe-EEE-ee-ccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 339 LQLRRGET-LAV-HW-LQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 339 l~l~~gEa-LaV-n~-~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
. ++.. +++ .+ .+|.+.+. .....+|+.+ +.|+|.-.++++
T Consensus 97 --~-~~~~D~v~~~~~~~~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 97 --L-GRKFSAVVSMFSSVGYLKTT-EELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp --C-SSCEEEEEECTTGGGGCCSH-HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred --c-CCCCcEEEEcCchHhhcCCH-HHHHHHHHHHHHhcCCCeEEEEE
Confidence 1 2211 333 22 34433221 1234566554 778999888775
No 153
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=47.59 E-value=30 Score=31.28 Aligned_cols=103 Identities=9% Similarity=0.050 Sum_probs=56.3
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccc
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKK 330 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~ 330 (492)
.|++.+.-...-+|+|+|.|.|.--.. |+.+. -++|||+.+...++.+.+++. ..+ ..+|. ..+
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~----l~~~~-----~~v~~vD~~~~~~~~a~~~~~----~~~-~v~~~--~~d 124 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTAL----IAEIV-----DKVVSVEINEKMYNYASKLLS----YYN-NIKLI--LGD 124 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHH----HHHHS-----SEEEEEESCHHHHHHHHHHHT----TCS-SEEEE--ESC
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHH----HHHHc-----CEEEEEeCCHHHHHHHHHHHh----hcC-CeEEE--ECC
Confidence 455555444556899999998864333 33331 489999998777766555543 233 33442 223
Q ss_pred ccc-cccccccccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEe
Q 045494 331 FGD-IDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVE 382 (492)
Q Consensus 331 ~ee-l~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvE 382 (492)
..+ +.. -.+=+.|+++..+|.+.+ ...+.|+|.-.+++.
T Consensus 125 ~~~~~~~----~~~fD~v~~~~~~~~~~~---------~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 125 GTLGYEE----EKPYDRVVVWATAPTLLC---------KPYEQLKEGGIMILP 164 (231)
T ss_dssp GGGCCGG----GCCEEEEEESSBBSSCCH---------HHHHTEEEEEEEEEE
T ss_pred ccccccc----CCCccEEEECCcHHHHHH---------HHHHHcCCCcEEEEE
Confidence 322 110 011134555544444321 356788998766654
No 154
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=47.55 E-value=22 Score=31.53 Aligned_cols=97 Identities=10% Similarity=-0.013 Sum_probs=55.7
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeeccccccccccccc
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~~~~eel~~~~l~ 340 (492)
-+|+|+|.|.|.--..|.+.+ |..++|||+.+...++.+.++ ++..|++ ++|. ..+..++.+.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~v~~~--~~d~~~~~~~--- 130 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSLGKRVRFLRQV----QHELKLENIEPV--QSRVEEFPSE--- 130 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESCHHHHHHHHHH----HHHTTCSSEEEE--ECCTTTSCCC---
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCCHHHHHHHHHH----HHHcCCCCeEEE--ecchhhCCcc---
Confidence 489999999997655554432 336999999987766555444 3445664 4443 3333332211
Q ss_pred ccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEee
Q 045494 341 LRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVEQ 383 (492)
Q Consensus 341 l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvEq 383 (492)
..=+.|++|.. .....+|+.+ +.|+|.-.++++.
T Consensus 131 -~~~D~i~~~~~--------~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 131 -PPFDGVISRAF--------ASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp -SCEEEEECSCS--------SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred -CCcCEEEEecc--------CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 01122333321 2345666665 5689988887763
No 155
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=47.26 E-value=59 Score=30.05 Aligned_cols=118 Identities=16% Similarity=0.138 Sum_probs=59.1
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeecc
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIAK 329 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~~ 329 (492)
.+++... ...=.|+|+|.|.| .+...||.+. |..++|||+.+.+.+-+...+..+-++..|++ .+| +..
T Consensus 16 ~~~~~~~-~~~~~vLDiGCG~G----~~~~~la~~~---~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~--~~~ 85 (225)
T 3p2e_A 16 ELTEIIG-QFDRVHIDLGTGDG----RNIYKLAIND---QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVF--VIA 85 (225)
T ss_dssp HHHHHHT-TCSEEEEEETCTTS----HHHHHHHHTC---TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEE--ECC
T ss_pred HHHHHhC-CCCCEEEEEeccCc----HHHHHHHHhC---CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEE--EEc
Confidence 3444333 34457999999988 3555566543 45899999988443322222223333455664 555 333
Q ss_pred cccccccccccccCCCeE--EEeecccccc-CCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 330 KFGDIDASMLQLRRGETL--AVHWLQHSLY-DATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 330 ~~eel~~~~l~l~~gEaL--aVn~~lh~L~-~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
+.+++... + .+-+. .+|+....+. ........+|+.+ |-|+|.-.+++.
T Consensus 86 d~~~l~~~-~---~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 86 AAESLPFE-L---KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp BTTBCCGG-G---TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred CHHHhhhh-c---cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 44444211 1 13222 2343211100 0001123455544 779999887763
No 156
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=47.04 E-value=30 Score=32.32 Aligned_cols=102 Identities=11% Similarity=0.050 Sum_probs=54.9
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeeccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIAKKFGDIDASM 338 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~~~~eel~~~~ 338 (492)
.-.|+|+|.+.|.--.. ||.+. |+..+||+|+.+.+.++.+.++ ++..|++ .+|.. .+..+.-+.
T Consensus 64 ~~~VLdiG~G~G~~~~~----la~~~--~~~~~v~~vD~s~~~~~~a~~~----~~~~g~~~~v~~~~--~d~~~~l~~- 130 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIW----MAREL--PADGQLLTLEADAHHAQVAREN----LQLAGVDQRVTLRE--GPALQSLES- 130 (248)
T ss_dssp CSEEEEECCTTSHHHHH----HHTTS--CTTCEEEEEECCHHHHHHHHHH----HHHTTCTTTEEEEE--SCHHHHHHT-
T ss_pred CCEEEEecCCchHHHHH----HHHhC--CCCCEEEEEECCHHHHHHHHHH----HHHcCCCCcEEEEE--cCHHHHHHh-
Confidence 34799999998864433 44332 3357999999988777655544 4445664 45532 222221010
Q ss_pred cc-ccCCCeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEe
Q 045494 339 LQ-LRRGETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVE 382 (492)
Q Consensus 339 l~-l~~gEaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvE 382 (492)
+. ..+=+.|.++.. ......+|+ ..+-|+|.-+++++
T Consensus 131 ~~~~~~fD~V~~d~~-------~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 131 LGECPAFDLIFIDAD-------KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CCSCCCCSEEEECSC-------GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred cCCCCCeEEEEECCc-------hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 00 001123433321 111234554 45789999888875
No 157
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=46.32 E-value=88 Score=31.25 Aligned_cols=107 Identities=14% Similarity=0.063 Sum_probs=56.2
Q ss_pred CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC--ceEEeeeccccccccc
Q 045494 259 RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL--SFEFHPIAKKFGDIDA 336 (492)
Q Consensus 259 ~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv--pFeF~~V~~~~eel~~ 336 (492)
...-.|+|.|.|.|. +.-.+|.+. +.-+|+|++.+...++.+.+++ +..|+ ..+|. ..+..++..
T Consensus 216 ~~~~~vLD~gCGsG~----~~i~~a~~~---~~~~v~g~Dis~~~l~~A~~n~----~~~gl~~~i~~~--~~D~~~~~~ 282 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGT----ILIELALRR---YSGEIIGIEKYRKHLIGAEMNA----LAAGVLDKIKFI--QGDATQLSQ 282 (373)
T ss_dssp CCSCCEEETTCTTCH----HHHHHHHTT---CCSCEEEEESCHHHHHHHHHHH----HHTTCGGGCEEE--ECCGGGGGG
T ss_pred CCCCEEEEccCcCcH----HHHHHHHhC---CCCeEEEEeCCHHHHHHHHHHH----HHcCCCCceEEE--ECChhhCCc
Confidence 344579999999885 344455442 1238999999988787766664 34566 44543 233333321
Q ss_pred ccccccCCCeEEEeeccccccCCCCcc----HHHHHHHHh-cCCcEEEEE
Q 045494 337 SMLQLRRGETLAVHWLQHSLYDATGPD----WKTLRLLEE-LSPRVVTLV 381 (492)
Q Consensus 337 ~~l~l~~gEaLaVn~~lh~L~~~~~~~----~~~L~~Ir~-L~Pkvvvlv 381 (492)
. ...=..|++|...+......... ..+++.++. |.+.+++++
T Consensus 283 ~---~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 283 Y---VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp T---CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred c---cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 1 01123567775433222221112 456666655 655555553
No 158
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=45.51 E-value=33 Score=30.15 Aligned_cols=45 Identities=18% Similarity=0.017 Sum_probs=30.8
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
+.-.|+|+|.+.|.- ...|+.+ |+. ++|||+.+...++.+.+++.
T Consensus 42 ~~~~vLdiGcG~G~~----~~~l~~~--~~~--~v~~~D~s~~~~~~a~~~~~ 86 (215)
T 2pxx_A 42 PEDRILVLGCGNSAL----SYELFLG--GFP--NVTSVDYSSVVVAAMQACYA 86 (215)
T ss_dssp TTCCEEEETCTTCSH----HHHHHHT--TCC--CEEEEESCHHHHHHHHHHTT
T ss_pred CCCeEEEECCCCcHH----HHHHHHc--CCC--cEEEEeCCHHHHHHHHHhcc
Confidence 445799999998853 3344444 333 89999998877776665543
No 159
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=45.40 E-value=42 Score=32.72 Aligned_cols=111 Identities=8% Similarity=-0.032 Sum_probs=58.1
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHH-hCC-ceEEeeeccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKR-LGL-SFEFHPIAKKFGDIDASM 338 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~s-lgv-pFeF~~V~~~~eel~~~~ 338 (492)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+.+.++.+.+++...+.. ++- .++|. ..+..+.
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~--~~D~~~~---- 150 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRH---KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLV--IDDGVNF---- 150 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTC---TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEE--CSCSCC-----
T ss_pred CCEEEEEeCChhH----HHHHHHhC---CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEE--EChHHHH----
Confidence 3489999999885 45556654 34579999999888787777776655321 111 23332 2222111
Q ss_pred ccccCC--CeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEEeec
Q 045494 339 LQLRRG--ETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLVEQE 384 (492)
Q Consensus 339 l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~PkvvvlvEqe 384 (492)
+.-.++ ++|+++...+......--...+++. -+.|+|.-++++.-+
T Consensus 151 l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 151 VNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp --CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 000111 3455554322111100011456654 478999988887654
No 160
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=43.10 E-value=1.4e+02 Score=28.17 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=28.6
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCC-CHHHHHHHHHHH
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGT-SMEVLLETGKQL 311 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~-~~~~L~etg~rL 311 (492)
-.|+|+|.|.|.- + ..|+.+ |. -++|||+. +.+.++.+.+++
T Consensus 81 ~~vLDlG~G~G~~--~--~~~a~~--~~--~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 81 KTVCELGAGAGLV--S--IVAFLA--GA--DQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp CEEEETTCTTSHH--H--HHHHHT--TC--SEEEEEECSCHHHHHHHHHHH
T ss_pred CeEEEecccccHH--H--HHHHHc--CC--CEEEEEeCCCHHHHHHHHHHH
Confidence 4799999998852 2 245544 21 38999999 677776666554
No 161
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=42.54 E-value=62 Score=30.97 Aligned_cols=111 Identities=11% Similarity=-0.039 Sum_probs=61.2
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEeeecccccc-ccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHPIAKKFGD-IDASM 338 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~V~~~~ee-l~~~~ 338 (492)
.-+|+|+|.|.|. +...++.++ |.-++|+|+.+...++.+.+++..++..++- .+++ +..+..+ +...
T Consensus 76 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v--~~~D~~~~l~~~- 145 (275)
T 1iy9_A 76 PEHVLVVGGGDGG----VIREILKHP---SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDV--QVDDGFMHIAKS- 145 (275)
T ss_dssp CCEEEEESCTTCH----HHHHHTTCT---TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEE--EESCSHHHHHTC-
T ss_pred CCEEEEECCchHH----HHHHHHhCC---CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEE--EECcHHHHHhhC-
Confidence 4579999999884 455566553 4469999999988888777777666443321 2333 2222221 1100
Q ss_pred ccccCCCeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEee
Q 045494 339 LQLRRGETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVEQ 383 (492)
Q Consensus 339 l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvEq 383 (492)
-..=+.|+++...+......--...+++ ..+.|+|.-++++..
T Consensus 146 --~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 146 --ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp --CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred --CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 0111345555432211110001235555 447899999888864
No 162
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=41.91 E-value=59 Score=27.92 Aligned_cols=103 Identities=12% Similarity=0.005 Sum_probs=58.3
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeeccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIAKKFGDIDASM 338 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~~~~eel~~~~ 338 (492)
.-.|+|+|.|.|.- ...|+.++ .-++|||+.+.+.++.+.+++ +..|++ .+| +..+..+..+
T Consensus 32 ~~~vLDlGcG~G~~----~~~l~~~~----~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~~--~~~d~~~~~~-- 95 (177)
T 2esr_A 32 GGRVLDLFAGSGGL----AIEAVSRG----MSAAVLVEKNRKAQAIIQDNI----IMTKAENRFTL--LKMEAERAID-- 95 (177)
T ss_dssp SCEEEEETCTTCHH----HHHHHHTT----CCEEEEECCCHHHHHHHHHHH----HTTTCGGGEEE--ECSCHHHHHH--
T ss_pred CCeEEEeCCCCCHH----HHHHHHcC----CCEEEEEECCHHHHHHHHHHH----HHcCCCCceEE--EECcHHHhHH--
Confidence 34799999998853 33355552 358999999887776655544 445664 444 3333333110
Q ss_pred ccccCC--CeEEEeeccccccCCCCccHHHHHHH---HhcCCcEEEEEeecCC
Q 045494 339 LQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL---EELSPRVVTLVEQEIS 386 (492)
Q Consensus 339 l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I---r~L~PkvvvlvEqea~ 386 (492)
..++ +.|++|...|. ...+.+++.+ +-|+|.-+++++....
T Consensus 96 --~~~~~fD~i~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 96 --CLTGRFDLVFLDPPYAK-----ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp --HBCSCEEEEEECCSSHH-----HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred --hhcCCCCEEEECCCCCc-----chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 0011 24445543321 1234566666 6789998888775544
No 163
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=41.50 E-value=1.5e+02 Score=27.83 Aligned_cols=58 Identities=21% Similarity=0.198 Sum_probs=36.8
Q ss_pred HHHHhhhc---cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHH
Q 045494 250 QAILEAFH---RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKR 317 (492)
Q Consensus 250 qAILEA~~---g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~s 317 (492)
.+|+.+++ =...=.|+|+|.+.|. |...+-.+.. + .=+++||+.+...++ .|.+.|+.
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~-~t~~la~~v~-~----~G~V~avD~s~~~l~----~l~~~a~~ 123 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGT-TISHVSDIIE-L----NGKAYGVEFSPRVVR----ELLLVAQR 123 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSH-HHHHHHHHHT-T----TSEEEEEECCHHHHH----HHHHHHHH
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCH-HHHHHHHHhC-C----CCEEEEEECcHHHHH----HHHHHhhh
Confidence 34555554 2334578999999998 7766665542 2 238999998866443 34445544
No 164
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=40.83 E-value=44 Score=32.54 Aligned_cols=71 Identities=10% Similarity=-0.022 Sum_probs=48.6
Q ss_pred CccchhhhhhhHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHH
Q 045494 239 PFIKFAHFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFA 315 (492)
Q Consensus 239 P~~kfa~ftANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA 315 (492)
+=.++.|-+....|++.+.-...-.|+|+|.+.|.-=..|.+.+ | |.-+++||+.+...++.+.+++..+-
T Consensus 84 ~~~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~-----g-~~~~v~~vD~~~~~~~~a~~~~~~~~ 154 (336)
T 2b25_A 84 RGTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAV-----G-SQGRVISFEVRKDHHDLAKKNYKHWR 154 (336)
T ss_dssp CSSCCCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHH-----C-TTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHh-----C-CCceEEEEeCCHHHHHHHHHHHHHhh
Confidence 33445666656667777654455589999999986444444332 1 34689999999888888888777654
No 165
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=39.56 E-value=99 Score=28.01 Aligned_cols=101 Identities=9% Similarity=-0.026 Sum_probs=51.6
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQ 340 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~ 340 (492)
.-.|+|+|.+.|.- ...|+.+.+ |.-+++||+.+...++. +.+.|+.. -..+|. ..+..+.. .+.
T Consensus 78 ~~~vLDlG~G~G~~----~~~la~~~g--~~~~v~gvD~s~~~i~~----~~~~a~~~-~~v~~~--~~d~~~~~--~~~ 142 (233)
T 2ipx_A 78 GAKVLYLGAASGTT----VSHVSDIVG--PDGLVYAVEFSHRSGRD----LINLAKKR-TNIIPV--IEDARHPH--KYR 142 (233)
T ss_dssp TCEEEEECCTTSHH----HHHHHHHHC--TTCEEEEECCCHHHHHH----HHHHHHHC-TTEEEE--CSCTTCGG--GGG
T ss_pred CCEEEEEcccCCHH----HHHHHHHhC--CCcEEEEEECCHHHHHH----HHHHhhcc-CCeEEE--EcccCChh--hhc
Confidence 44799999998863 333443321 23489999988664433 33444442 223332 22332211 111
Q ss_pred ccCC--CeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEe
Q 045494 341 LRRG--ETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVE 382 (492)
Q Consensus 341 l~~g--EaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvE 382 (492)
..++ +.|+++.. .+.....++. ..+.|+|.-.+++.
T Consensus 143 ~~~~~~D~V~~~~~------~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 143 MLIAMVDVIFADVA------QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp GGCCCEEEEEECCC------CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCcEEEEEEcCC------CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 1112 23333322 2222234454 78899999888775
No 166
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=38.65 E-value=52 Score=29.60 Aligned_cols=61 Identities=8% Similarity=0.010 Sum_probs=38.2
Q ss_pred HHHhhhc--cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 045494 251 AILEAFH--RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFN 313 (492)
Q Consensus 251 AILEA~~--g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~ 313 (492)
.+++.+. -...-+|+|+|.+.|..-..|.+.+..+ ..|..++|||+.+.+.++.+.+++.+
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~--~~~~~~v~~vD~~~~~~~~a~~~~~~ 131 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVL--ENKNSYVIGLERVKDLVNFSLENIKR 131 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTT--TCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhccc--CCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 4556553 2344589999999986444443332111 12456999999988877776666544
No 167
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=38.61 E-value=70 Score=27.39 Aligned_cols=106 Identities=10% Similarity=-0.025 Sum_probs=57.1
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeeccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIAKKFGDIDASM 338 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~~~~eel~~~~ 338 (492)
.-.|+|+|.+.|.--. .++.+. .-++|||+.+...++.+.+++. ..+++ .+|. ..+..+....
T Consensus 45 ~~~vLD~GcG~G~~~~----~~~~~~----~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~~~~~--~~d~~~~~~~- 109 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAI----EAVSRG----MDKSICIEKNFAALKVIKENIA----ITKEPEKFEVR--KMDANRALEQ- 109 (187)
T ss_dssp SCEEEETTCTTCHHHH----HHHHTT----CSEEEEEESCHHHHHHHHHHHH----HHTCGGGEEEE--ESCHHHHHHH-
T ss_pred CCCEEEeCCccCHHHH----HHHHcC----CCEEEEEECCHHHHHHHHHHHH----HhCCCcceEEE--ECcHHHHHHH-
Confidence 3489999999886322 233342 3589999998877766655544 34553 4443 2333221110
Q ss_pred ccccCC--CeEEEeeccccccCCCCccHHHHHHH---HhcCCcEEEEEeecCC
Q 045494 339 LQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL---EELSPRVVTLVEQEIS 386 (492)
Q Consensus 339 l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I---r~L~PkvvvlvEqea~ 386 (492)
+...++ +.|++|...+. ...+.++..+ +-|+|.-+++++....
T Consensus 110 ~~~~~~~fD~i~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 110 FYEEKLQFDLVLLDPPYAK-----QEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHTTCCEEEEEECCCGGG-----CCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHhcCCCCCEEEECCCCCc-----hhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 000011 24455544331 1234555554 5589998888765443
No 168
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=38.44 E-value=29 Score=32.62 Aligned_cols=53 Identities=15% Similarity=0.149 Sum_probs=34.6
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQL 311 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL 311 (492)
+.|++++.-...-+|+|+|.|.|.- ...|+.+. -++|||+.+.+.++.+.+++
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~l----t~~l~~~~-----~~v~~vD~~~~~~~~a~~~~ 72 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGHF----TLELVQRC-----NFVTAIEIDHKLCKTTENKL 72 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSHH----HHHHHHHS-----SEEEEECSCHHHHHHHHHHT
T ss_pred HHHHHhCCCCCCCEEEEEeCCchHH----HHHHHHcC-----CeEEEEECCHHHHHHHHHhh
Confidence 3444444434455899999999864 34455442 48999999877666555544
No 169
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=38.29 E-value=51 Score=29.61 Aligned_cols=57 Identities=12% Similarity=0.192 Sum_probs=37.9
Q ss_pred HHHhhhc--cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 045494 251 AILEAFH--RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFN 313 (492)
Q Consensus 251 AILEA~~--g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~ 313 (492)
.+++.+. -...-+|+|+|.+.|..-..|.+.+ | |..++|||+.+...++.+.+++..
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~-----~-~~~~v~~vD~s~~~~~~a~~~~~~ 124 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMV-----G-CTGKVIGIDHIKELVDDSVNNVRK 124 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHH-----C-TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHh-----C-CCcEEEEEeCCHHHHHHHHHHHHh
Confidence 4566654 2345689999999887554444433 1 345899999988877766666543
No 170
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=37.88 E-value=1.7e+02 Score=28.90 Aligned_cols=98 Identities=12% Similarity=0.083 Sum_probs=54.5
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEeeeccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHPIAKKFGDIDASM 338 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~V~~~~eel~~~~ 338 (492)
.-=+|+|+|.|-|. ..+++ ||..++ -++|||+.+.+.++.+.+++.+ .|+ .++|. ..+..++..
T Consensus 122 ~g~rVLDIGcG~G~-~ta~~--lA~~~g----a~V~gIDis~~~l~~Ar~~~~~----~gl~~v~~v--~gDa~~l~d-- 186 (298)
T 3fpf_A 122 RGERAVFIGGGPLP-LTGIL--LSHVYG----MRVNVVEIEPDIAELSRKVIEG----LGVDGVNVI--TGDETVIDG-- 186 (298)
T ss_dssp TTCEEEEECCCSSC-HHHHH--HHHTTC----CEEEEEESSHHHHHHHHHHHHH----HTCCSEEEE--ESCGGGGGG--
T ss_pred CcCEEEEECCCccH-HHHHH--HHHccC----CEEEEEECCHHHHHHHHHHHHh----cCCCCeEEE--ECchhhCCC--
Confidence 34478999988763 33333 344444 4899999998888776665543 344 34443 233323210
Q ss_pred ccccCCCeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 339 LQLRRGETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 339 l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
.+=++|.+... ......+++.+ |.|+|.-.+++.
T Consensus 187 ---~~FDvV~~~a~-------~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 187 ---LEFDVLMVAAL-------AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp ---CCCSEEEECTT-------CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred ---CCcCEEEECCC-------ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 11123433321 12345666544 778998777764
No 171
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=37.66 E-value=58 Score=30.35 Aligned_cols=59 Identities=7% Similarity=0.035 Sum_probs=37.8
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNF 314 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~f 314 (492)
..|++.+.-...-.|+|+|.+.|.-=..|.+.+ + |..++++++.+.+.++.+.+++..+
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~----~--~~~~v~~vD~~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAV----G--PAGQVISYEQRADHAEHARRNVSGC 147 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH----C--TTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHh----C--CCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 345555543444579999999886333333322 1 3358999999888777776666544
No 172
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=37.52 E-value=53 Score=29.98 Aligned_cols=57 Identities=7% Similarity=0.008 Sum_probs=36.5
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFN 313 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~ 313 (492)
.|++.+.-...-+|+|+|.+.|.--..|.+.+ + |.-++|+++.+.+.++.+.+++..
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~----~--~~~~v~~~D~~~~~~~~a~~~~~~ 143 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAV----G--EKGLVESYEARPHHLAQAERNVRA 143 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH----C--TTSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHh----C--CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 45555544445589999999885333333332 1 335999999988777766665543
No 173
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=37.31 E-value=38 Score=31.27 Aligned_cols=105 Identities=11% Similarity=0.013 Sum_probs=56.7
Q ss_pred hccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc---eEEeeeccccc
Q 045494 256 FHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS---FEFHPIAKKFG 332 (492)
Q Consensus 256 ~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp---FeF~~V~~~~e 332 (492)
....+.-.|+|+|.+.|.-=..|.+++ ||.-+||+|+.+.+.++.+.++ ++..|+. ++|. ..+..
T Consensus 52 ~~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~~~~~~~a~~~----~~~~g~~~~~i~~~--~gda~ 119 (221)
T 3dr5_A 52 TNGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPESEHQRQAKAL----FREAGYSPSRVRFL--LSRPL 119 (221)
T ss_dssp SCCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSCHHHHHHHHHH----HHHTTCCGGGEEEE--CSCHH
T ss_pred hCCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECCHHHHHHHHHH----HHHcCCCcCcEEEE--EcCHH
Confidence 333445589999998886544444443 2345999999988776655444 4556665 4443 22222
Q ss_pred ccccccccccCC--CeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEe
Q 045494 333 DIDASMLQLRRG--ETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVE 382 (492)
Q Consensus 333 el~~~~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvE 382 (492)
++-+. +.++ +.|.+.. .......+++ ..+-|+|.-+++++
T Consensus 120 ~~l~~---~~~~~fD~V~~d~-------~~~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 120 DVMSR---LANDSYQLVFGQV-------SPMDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp HHGGG---SCTTCEEEEEECC-------CTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred HHHHH---hcCCCcCeEEEcC-------cHHHHHHHHHHHHHHcCCCcEEEEe
Confidence 21110 1111 1222221 1122334554 45789999988875
No 174
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=37.24 E-value=39 Score=31.17 Aligned_cols=55 Identities=15% Similarity=0.010 Sum_probs=38.0
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEe
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFH 325 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~ 325 (492)
+.-+|+|+|.|.|.--..|.+.. |..++|||+.+...++.+.+++. ..|+. ++|.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-------~~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~ 121 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-------NGWYFLATEVDDMCFNYAKKNVE----QNNLSDLIKVV 121 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-------HCCEEEEEESCHHHHHHHHHHHH----HTTCTTTEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-------CCCeEEEEECCHHHHHHHHHHHH----HcCCCccEEEE
Confidence 34589999999997655555543 23689999998887776666553 45664 5554
No 175
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=36.24 E-value=50 Score=31.10 Aligned_cols=61 Identities=15% Similarity=0.208 Sum_probs=38.2
Q ss_pred HHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEE
Q 045494 252 ILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEF 324 (492)
Q Consensus 252 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF 324 (492)
+++.+. .+.-+|+|+|.|.|.-=. .|+.+. |..++||++.+...++.+.+++. ..|++ .+|
T Consensus 102 ~l~~~~-~~~~~vLDlG~GsG~~~~----~la~~~---~~~~v~~vD~s~~~l~~a~~n~~----~~~~~~v~~ 163 (276)
T 2b3t_A 102 ALARLP-EQPCRILDLGTGTGAIAL----ALASER---PDCEIIAVDRMPDAVSLAQRNAQ----HLAIKNIHI 163 (276)
T ss_dssp HHHHSC-SSCCEEEEETCTTSHHHH----HHHHHC---TTSEEEEECSSHHHHHHHHHHHH----HHTCCSEEE
T ss_pred HHHhcc-cCCCEEEEecCCccHHHH----HHHHhC---CCCEEEEEECCHHHHHHHHHHHH----HcCCCceEE
Confidence 334333 345689999999986333 333222 34699999999887776665543 45664 444
No 176
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=35.82 E-value=1.4e+02 Score=30.12 Aligned_cols=118 Identities=16% Similarity=0.103 Sum_probs=67.1
Q ss_pred hhHHHHhhhcc------CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc
Q 045494 248 SNQAILEAFHR------RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS 321 (492)
Q Consensus 248 ANqAILEA~~g------~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp 321 (492)
....+++.+.. .+.-+|+|+|.|.|.- ...|+.+ | .++|||+.+...++.+.+++ +..++.
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~----~~~la~~--g---~~V~gvDis~~al~~A~~n~----~~~~~~ 281 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGAL----TLPLARM--G---AEVVGVEDDLASVLSLQKGL----EANALK 281 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTT----HHHHHHT--T---CEEEEEESBHHHHHHHHHHH----HHTTCC
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHH----HHHHHHc--C---CEEEEEECCHHHHHHHHHHH----HHcCCC
Confidence 34556666632 2445899999999964 3334444 2 39999999888777666654 345666
Q ss_pred eEEeeecccccccccccccccCCCeEEEeeccccccCC-CCccHHHHH-HHHhcCCcEEEEEee
Q 045494 322 FEFHPIAKKFGDIDASMLQLRRGETLAVHWLQHSLYDA-TGPDWKTLR-LLEELSPRVVTLVEQ 383 (492)
Q Consensus 322 FeF~~V~~~~eel~~~~l~l~~gEaLaVn~~lh~L~~~-~~~~~~~L~-~Ir~L~PkvvvlvEq 383 (492)
.+|. ..+..+.... -..=+.|++|..+|..... ......+++ ..+.|+|.-.+++.-
T Consensus 282 v~~~--~~D~~~~~~~---~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 282 AQAL--HSDVDEALTE---EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CEEE--ECSTTTTSCT---TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEE--Ecchhhcccc---CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 5553 3333332111 0111356667655542221 112344554 557799988877753
No 177
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=35.61 E-value=1.8e+02 Score=28.42 Aligned_cols=66 Identities=11% Similarity=0.107 Sum_probs=38.5
Q ss_pred CCccchhh-hhhhHH----HHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 238 SPFIKFAH-FTSNQA----ILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 238 sP~~kfa~-ftANqA----ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
.|=-+++. |..+.. |++++.-...-+|+|+|.|.|..-..|.+ + + -++|||+.+.+.++.+.+++.
T Consensus 23 ~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~----~-~----~~V~aVEid~~li~~a~~~~~ 93 (295)
T 3gru_A 23 KPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAK----N-A----KKVYVIEIDKSLEPYANKLKE 93 (295)
T ss_dssp -------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHH----H-S----SEEEEEESCGGGHHHHHHHHH
T ss_pred CCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHh----c-C----CEEEEEECCHHHHHHHHHHhc
Confidence 34444554 444444 45555544556899999999975444444 3 1 389999988776666655554
No 178
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=34.82 E-value=76 Score=28.67 Aligned_cols=63 Identities=14% Similarity=0.213 Sum_probs=41.0
Q ss_pred HHHhhhc--cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 045494 251 AILEAFH--RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNF 314 (492)
Q Consensus 251 AILEA~~--g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~f 314 (492)
.+++.+. -...-+|+|+|.+.|..=..|.+.+... +..+.-++|+|+.+.+.++.+.+++.+.
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~ 137 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAK-GVDADTRIVGIEHQAELVRRSKANLNTD 137 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHS-CCCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccc-cCCccCEEEEEEcCHHHHHHHHHHHHhc
Confidence 4455553 2334589999999887655555544321 2223469999999988888777777654
No 179
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=34.74 E-value=41 Score=31.37 Aligned_cols=50 Identities=16% Similarity=0.162 Sum_probs=35.7
Q ss_pred cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 045494 258 RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNF 314 (492)
Q Consensus 258 g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~f 314 (492)
..+...|+|+|.|.|. ++..||.+. |...++||+.+...++.+.+++.+.
T Consensus 44 ~~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~GiDis~~~l~~A~~~~~~l 93 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGG----LLVELSPLF---PDTLILGLEIRVKVSDYVQDRIRAL 93 (235)
T ss_dssp --CCEEEEEETCTTCH----HHHHHGGGS---TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEccCCcH----HHHHHHHHC---CCCeEEEEECCHHHHHHHHHHHHHH
Confidence 4456789999999885 344566553 3468999999988888777776554
No 180
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=33.22 E-value=45 Score=31.47 Aligned_cols=55 Identities=15% Similarity=0.109 Sum_probs=32.7
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQL 311 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL 311 (492)
.+++.+.-...-.|+|+|.+.|.--..|.+.+ .|..++|||+.+...++.+.+++
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~------~~~~~v~~vD~s~~~~~~a~~~~ 155 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYAL------NGKGTLTVVERDEDNLKKAMDNL 155 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHH------TTSSEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHc------CCCCEEEEEECCHHHHHHHHHHH
Confidence 34444443444579999999886444444433 13359999999887776655544
No 181
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=32.96 E-value=29 Score=31.24 Aligned_cols=54 Identities=13% Similarity=0.162 Sum_probs=35.0
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEe
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFH 325 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~ 325 (492)
-+|+|+|.+.|.--. .|+.+. |+..++|+|+.+...++.+.+++ +..|+. ++|.
T Consensus 66 ~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~v~~~ 121 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAI----AMGLAL--PKDGTLITCDVDEKSTALAKEYW----EKAGLSDKIGLR 121 (225)
T ss_dssp SEEEEECCTTSHHHH----HHHTTC--CTTCEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEE
T ss_pred CEEEEeCCcchHHHH----HHHHhC--CCCCEEEEEeCCHHHHHHHHHHH----HHCCCCCceEEE
Confidence 389999999886333 344432 23579999999887776655544 445654 5553
No 182
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=32.79 E-value=31 Score=34.03 Aligned_cols=57 Identities=23% Similarity=0.313 Sum_probs=40.9
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNF 314 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~f 314 (492)
.+++.+.-...=.|+|.|.|.|..-..|.+.+ + ..++|||+.+.+.++.+.+++..+
T Consensus 17 e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~---~----~~~VigvD~d~~al~~A~~~~~~~ 73 (301)
T 1m6y_A 17 EVIEFLKPEDEKIILDCTVGEGGHSRAILEHC---P----GCRIIGIDVDSEVLRIAEEKLKEF 73 (301)
T ss_dssp HHHHHHCCCTTCEEEETTCTTSHHHHHHHHHC---T----TCEEEEEESCHHHHHHHHHHTGGG
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHC---C----CCEEEEEECCHHHHHHHHHHHHhc
Confidence 34455543334479999999998777666654 1 358999999998888888877554
No 183
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=31.81 E-value=99 Score=29.32 Aligned_cols=89 Identities=16% Similarity=0.013 Sum_probs=48.9
Q ss_pred EEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccccccc
Q 045494 263 HIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASMLQLR 342 (492)
Q Consensus 263 HIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~l~l~ 342 (492)
.|+|+|.|.|. +...|+.+ | -++|||+.+...++. |+.. -.++| +..+.+++ .+.
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~--~---~~v~gvD~s~~ml~~--------a~~~-~~v~~--~~~~~e~~-----~~~ 96 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF--F---ERVHAVDPGEAQIRQ--------ALRH-PRVTY--AVAPAEDT-----GLP 96 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT--C---SEEEEEESCHHHHHT--------CCCC-TTEEE--EECCTTCC-----CCC
T ss_pred CEEEEcCCCCH----HHHHHHHh--C---CEEEEEeCcHHhhhh--------hhhc-CCcee--ehhhhhhh-----ccc
Confidence 58999999985 34455654 2 379999998765543 2221 12333 22334443 233
Q ss_pred CCC--eEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEE
Q 045494 343 RGE--TLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLV 381 (492)
Q Consensus 343 ~gE--aLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~Pkvvvlv 381 (492)
++. .|.++..+|.+ + .+.+|+ .-|-|+|.-++++
T Consensus 97 ~~sfD~v~~~~~~h~~-~----~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 97 PASVDVAIAAQAMHWF-D----LDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp SSCEEEEEECSCCTTC-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred CCcccEEEEeeehhHh-h----HHHHHHHHHHHcCCCCEEEE
Confidence 332 34344345543 2 345655 4477899876644
No 184
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=31.72 E-value=89 Score=30.24 Aligned_cols=54 Identities=9% Similarity=0.105 Sum_probs=37.4
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCC-eEEEeecCCCHHHHHHHHHH
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPP-HLRMTGMGTSMEVLLETGKQ 310 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP-~LRITgI~~~~~~L~etg~r 310 (492)
.|++++.-...-+|+|+|.|.|.-=..|.+.. +. ..++|||+.+.+.++.+.++
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~------~~~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARL------ATPGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHH------CBTTBCEEEEECCHHHHHHHHHH
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhC------CCcCCeEEEEECCHHHHHHHHHh
Confidence 45566655556689999999998655555542 22 35799999987777665555
No 185
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=31.66 E-value=60 Score=29.10 Aligned_cols=42 Identities=10% Similarity=0.037 Sum_probs=29.9
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQ 310 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~r 310 (492)
+.-+|+|+|.|.|.- ...||.+ | .++|||+.+...++.+.++
T Consensus 22 ~~~~vLD~GCG~G~~----~~~la~~--g---~~V~gvD~S~~~l~~a~~~ 63 (203)
T 1pjz_A 22 PGARVLVPLCGKSQD----MSWLSGQ--G---YHVVGAELSEAAVERYFTE 63 (203)
T ss_dssp TTCEEEETTTCCSHH----HHHHHHH--C---CEEEEEEECHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHh----HHHHHHC--C---CeEEEEeCCHHHHHHHHHH
Confidence 445899999998853 3345654 3 4899999998877665543
No 186
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=29.70 E-value=3.4e+02 Score=25.45 Aligned_cols=95 Identities=13% Similarity=0.002 Sum_probs=53.1
Q ss_pred EEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeecccccccccccccc
Q 045494 263 HIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIAKKFGDIDASMLQL 341 (492)
Q Consensus 263 HIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~~~~eel~~~~l~l 341 (492)
.|+|+|.+.|.--..+ |.+.+ .-++|||+.+...++.+.+++ +..|++ .+| +..+..++ +. -
T Consensus 122 ~VLDlgcG~G~~s~~l----a~~~~---~~~V~~vD~s~~av~~a~~n~----~~n~l~~~~~--~~~d~~~~-~~---~ 184 (272)
T 3a27_A 122 VVVDMFAGIGYFTIPL----AKYSK---PKLVYAIEKNPTAYHYLCENI----KLNKLNNVIP--ILADNRDV-EL---K 184 (272)
T ss_dssp EEEETTCTTTTTHHHH----HHHTC---CSEEEEEECCHHHHHHHHHHH----HHTTCSSEEE--EESCGGGC-CC---T
T ss_pred EEEEecCcCCHHHHHH----HHhCC---CCEEEEEeCCHHHHHHHHHHH----HHcCCCCEEE--EECChHHc-Cc---c
Confidence 6899999998744333 33321 358999999887776655443 445653 443 33444443 21 0
Q ss_pred cCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEE
Q 045494 342 RRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLV 381 (492)
Q Consensus 342 ~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~Pkvvvlv 381 (492)
..=+.|+++... +..+.+...++.|+|.-++++
T Consensus 185 ~~~D~Vi~d~p~-------~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 185 DVADRVIMGYVH-------KTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp TCEEEEEECCCS-------SGGGGHHHHHHHEEEEEEEEE
T ss_pred CCceEEEECCcc-------cHHHHHHHHHHHcCCCCEEEE
Confidence 011244444321 223344455788999876655
No 187
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=28.86 E-value=3.4e+02 Score=27.28 Aligned_cols=61 Identities=20% Similarity=0.352 Sum_probs=39.7
Q ss_pred ceeEE-EEccc--------------cCcc---chHHHHHHHhcCCCCCCeEEEeecCC-------CHHHHHHHHHHHHHH
Q 045494 260 DRVHI-IDLDI--------------MQGL---QWPALFHILATRNEGPPHLRMTGMGT-------SMEVLLETGKQLFNF 314 (492)
Q Consensus 260 ~~VHI-IDfgI--------------~~G~---QWpsLiqaLA~R~gGPP~LRITgI~~-------~~~~L~etg~rL~~f 314 (492)
-+||| ||-|+ .+|+ ++..+++.++.. |.|++.|+.. +.+...+.-+++.++
T Consensus 133 ~~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~e~~~~~~~~~~~----~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~ 208 (428)
T 2j66_A 133 ARVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSL----QFTKFIGIHVYTGTQNLNTDSIIESMKYTVDL 208 (428)
T ss_dssp EEEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHHC----TTEEEEEEECCCCSCBCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHhC----CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 47888 88875 4676 677778777664 4599999853 233444455566665
Q ss_pred HHH----hCCceEE
Q 045494 315 AKR----LGLSFEF 324 (492)
Q Consensus 315 A~s----lgvpFeF 324 (492)
++. .|+++++
T Consensus 209 ~~~l~~~~g~~~~~ 222 (428)
T 2j66_A 209 GRNIYERYGIVCEC 222 (428)
T ss_dssp HHHHHHHHCCCCSE
T ss_pred HHHHHHHhCCCCCE
Confidence 544 4776654
No 188
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=28.18 E-value=79 Score=28.93 Aligned_cols=99 Identities=13% Similarity=0.050 Sum_probs=55.3
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeecccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIAKKFGDIDASML 339 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~~~~eel~~~~l 339 (492)
.-+|+|+|.|.|.-=..|.+ . . |..++|||+.+...++.+.++ ++..|++ ++| +..+.+++....
T Consensus 71 ~~~vLDiG~G~G~~~~~la~--~-~----~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~v~~--~~~d~~~~~~~~- 136 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKI--C-F----PHLHVTIVDSLNKRITFLEKL----SEALQLENTTF--CHDRAETFGQRK- 136 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHH--H-C----TTCEEEEEESCHHHHHHHHHH----HHHHTCSSEEE--EESCHHHHTTCT-
T ss_pred CCEEEEecCCCCHHHHHHHH--h-C----CCCEEEEEeCCHHHHHHHHHH----HHHcCCCCEEE--EeccHHHhcccc-
Confidence 34899999998863322222 1 2 336899999987766555444 4455663 444 333444432100
Q ss_pred cccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 340 QLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 340 ~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
.. ++ +.|+++. ......+++.+ +-|+|.-.+++.
T Consensus 137 ~~-~~~fD~V~~~~--------~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 137 DV-RESYDIVTARA--------VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp TT-TTCEEEEEEEC--------CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cc-cCCccEEEEec--------cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 00 11 1232222 12356788777 788998877764
No 189
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=27.99 E-value=3.2e+02 Score=24.32 Aligned_cols=53 Identities=11% Similarity=0.070 Sum_probs=34.0
Q ss_pred HHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 045494 251 AILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLF 312 (492)
Q Consensus 251 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~ 312 (492)
.|++.+.-...-.|+|+|.+.|.-- ..|+.+ + .++++++.+.+.++.+.+++.
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~----~~l~~~-~----~~v~~vD~~~~~~~~a~~~~~ 134 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALL----AVLSEV-A----GEVWTFEAVEEFYKTAQKNLK 134 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHH----HHHHHH-S----SEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHH----HHHHHh-C----CEEEEEecCHHHHHHHHHHHH
Confidence 4455544334458999999877533 333433 2 489999998887776665554
No 190
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=27.84 E-value=78 Score=29.43 Aligned_cols=41 Identities=20% Similarity=0.249 Sum_probs=34.3
Q ss_pred CCCCeEEEeecCCCH----HHHHHHHHHHHHHHHHhCCceEEeee
Q 045494 287 EGPPHLRMTGMGTSM----EVLLETGKQLFNFAKRLGLSFEFHPI 327 (492)
Q Consensus 287 gGPP~LRITgI~~~~----~~L~etg~rL~~fA~slgvpFeF~~V 327 (492)
=|||..|||...++. ..|+++-+.+.+..+..|..|.|+--
T Consensus 132 vgaP~Y~i~~~~~Dkk~g~~~L~~aie~i~~~I~~~gG~~~v~r~ 176 (188)
T 1yz7_A 132 LGAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGEATLLRK 176 (188)
T ss_dssp CSTTEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred EcCcEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEc
Confidence 378988888887763 36888999999999999999999753
No 191
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=27.59 E-value=3.4e+02 Score=27.42 Aligned_cols=41 Identities=7% Similarity=0.127 Sum_probs=27.7
Q ss_pred CCeEEEeecCC---CHHHHHHHHHHHHHHHHHhC--------CceEEeeecc
Q 045494 289 PPHLRMTGMGT---SMEVLLETGKQLFNFAKRLG--------LSFEFHPIAK 329 (492)
Q Consensus 289 PP~LRITgI~~---~~~~L~etg~rL~~fA~slg--------vpFeF~~V~~ 329 (492)
.|.+||+-|.. ....++...+++.+.-+.++ |=|.||.|-.
T Consensus 157 ~~~i~i~~i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaHglP~ 208 (362)
T 1lbq_A 157 ERSISWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPM 208 (362)
T ss_dssp TCCSEEEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBH
T ss_pred CCCceEEEecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecCCCcc
Confidence 35677777754 45677777888877766553 3388888654
No 192
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=27.27 E-value=1.2e+02 Score=23.80 Aligned_cols=35 Identities=23% Similarity=0.360 Sum_probs=20.1
Q ss_pred CCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEe
Q 045494 289 PPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFH 325 (492)
Q Consensus 289 PP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~ 325 (492)
-..+|||||. ...-.+..+.-...|+.+|+...|.
T Consensus 41 dleiritgvp--eqvrkelakeaerlakefnitvtyt 75 (85)
T 2kl8_A 41 DLEIRITGVP--EQVRKELAKEAERLAKEFNITVTYT 75 (85)
T ss_dssp CEEEEEESCC--HHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred eeEEEEecCh--HHHHHHHHHHHHHHHHhcCeEEEEE
Confidence 3479999994 2222333333344566777766664
No 193
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=26.68 E-value=64 Score=29.39 Aligned_cols=107 Identities=12% Similarity=0.094 Sum_probs=58.6
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC-ceEEeeec
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL-SFEFHPIA 328 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv-pFeF~~V~ 328 (492)
..+++.+.-...-.|+|+|.+.|..-..|.+.. + .++|+|+.+...++.+.+++. ..|+ ..+|..
T Consensus 81 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~------~--~~v~~vD~~~~~~~~a~~~~~----~~~~~~v~~~~-- 146 (235)
T 1jg1_A 81 AIMLEIANLKPGMNILEVGTGSGWNAALISEIV------K--TDVYTIERIPELVEFAKRNLE----RAGVKNVHVIL-- 146 (235)
T ss_dssp HHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHH------C--SCEEEEESCHHHHHHHHHHHH----HTTCCSEEEEE--
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHh------C--CEEEEEeCCHHHHHHHHHHHH----HcCCCCcEEEE--
Confidence 345566654445579999999886544444332 1 589999988777766655554 3454 244432
Q ss_pred ccc-cccccccccccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEee
Q 045494 329 KKF-GDIDASMLQLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVEQ 383 (492)
Q Consensus 329 ~~~-eel~~~~l~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvEq 383 (492)
.+. ..+... .+=+.|+++..++.+.+ ...+.|+|.-.+++.-
T Consensus 147 ~d~~~~~~~~----~~fD~Ii~~~~~~~~~~---------~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 147 GDGSKGFPPK----APYDVIIVTAGAPKIPE---------PLIEQLKIGGKLIIPV 189 (235)
T ss_dssp SCGGGCCGGG----CCEEEEEECSBBSSCCH---------HHHHTEEEEEEEEEEE
T ss_pred CCcccCCCCC----CCccEEEECCcHHHHHH---------HHHHhcCCCcEEEEEE
Confidence 221 111100 00134555544443321 4567889987776653
No 194
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=26.63 E-value=56 Score=29.76 Aligned_cols=105 Identities=10% Similarity=-0.035 Sum_probs=55.2
Q ss_pred CceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCceEEeeeccccccccccc
Q 045494 259 RDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSFEFHPIAKKFGDIDASM 338 (492)
Q Consensus 259 ~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpFeF~~V~~~~eel~~~~ 338 (492)
...-+|+|+|.|.|. +...|+.+. +. ++|||+.+...++.+.++ ++..+...+| +..+.+++..
T Consensus 59 ~~~~~vLDiGcGtG~----~~~~l~~~~---~~-~v~gvD~s~~~l~~a~~~----~~~~~~~v~~--~~~d~~~~~~-- 122 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAI----AASKVQEAP---ID-EHWIIECNDGVFQRLRDW----APRQTHKVIP--LKGLWEDVAP-- 122 (236)
T ss_dssp TTCEEEEEECCTTSH----HHHHHHTSC---EE-EEEEEECCHHHHHHHHHH----GGGCSSEEEE--EESCHHHHGG--
T ss_pred CCCCeEEEEeccCCH----HHHHHHhcC---CC-eEEEEcCCHHHHHHHHHH----HHhcCCCeEE--EecCHHHhhc--
Confidence 345689999999984 334444432 22 899999988777655543 3444544444 3333333210
Q ss_pred ccccCC--CeEEE-eeccccccCC-CCccHHHHH-HHHhcCCcEEEEE
Q 045494 339 LQLRRG--ETLAV-HWLQHSLYDA-TGPDWKTLR-LLEELSPRVVTLV 381 (492)
Q Consensus 339 l~l~~g--EaLaV-n~~lh~L~~~-~~~~~~~L~-~Ir~L~Pkvvvlv 381 (492)
.+.++ +.|++ ++.++ ..+. ....+.+|+ ..|-|+|.-+++.
T Consensus 123 -~~~~~~fD~V~~d~~~~~-~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 123 -TLPDGHFDGILYDTYPLS-EETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp -GSCTTCEEEEEECCCCCB-GGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred -ccCCCceEEEEECCcccc-hhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 12222 23444 23221 1111 112335555 4477899987764
No 195
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=26.36 E-value=46 Score=29.86 Aligned_cols=103 Identities=13% Similarity=0.051 Sum_probs=54.3
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeeccccccccccc
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIAKKFGDIDASM 338 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~~~~eel~~~~ 338 (492)
.-+|+|+|.+.|.--. .||.+. |+.-++|+|+.+...++.+.+++ +..|++ ++|.. .+..+.-+.
T Consensus 59 ~~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~v~~~~--~d~~~~~~~- 125 (223)
T 3duw_A 59 ARNILEIGTLGGYSTI----WLARGL--SSGGRVVTLEASEKHADIARSNI----ERANLNDRVEVRT--GLALDSLQQ- 125 (223)
T ss_dssp CSEEEEECCTTSHHHH----HHHTTC--CSSCEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEEE--SCHHHHHHH-
T ss_pred CCEEEEecCCccHHHH----HHHHhC--CCCCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEEE--cCHHHHHHH-
Confidence 3479999999885333 344432 33469999998877776555544 445663 44432 222221000
Q ss_pred ccc---cCCCeEEEeeccccccCCCCccHHHHH-HHHhcCCcEEEEEee
Q 045494 339 LQL---RRGETLAVHWLQHSLYDATGPDWKTLR-LLEELSPRVVTLVEQ 383 (492)
Q Consensus 339 l~l---~~gEaLaVn~~lh~L~~~~~~~~~~L~-~Ir~L~PkvvvlvEq 383 (492)
+.- .+=+.|.++... .....+|+ ..+.|+|.-+++++.
T Consensus 126 ~~~~~~~~fD~v~~d~~~-------~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 126 IENEKYEPFDFIFIDADK-------QNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp HHHTTCCCCSEEEECSCG-------GGHHHHHHHHHHTCCTTCEEEEES
T ss_pred HHhcCCCCcCEEEEcCCc-------HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 000 011233333211 12234554 457899999888763
No 196
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=25.03 E-value=4.5e+02 Score=26.78 Aligned_cols=56 Identities=13% Similarity=0.067 Sum_probs=37.7
Q ss_pred eeEEEEccccCc----cchHHHHHHHhcCCCC------CCeEEEeecCCCHHHHHHHHHHHHHHHH
Q 045494 261 RVHIIDLDIMQG----LQWPALFHILATRNEG------PPHLRMTGMGTSMEVLLETGKQLFNFAK 316 (492)
Q Consensus 261 ~VHIIDfgI~~G----~QWpsLiqaLA~R~gG------PP~LRITgI~~~~~~L~etg~rL~~fA~ 316 (492)
.+.|.|||.+.| .-+..+|+++..+... +|.+.+..-+.|......+-+.|..|-+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~ 118 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYR 118 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHh
Confidence 799999999999 4666778888776532 6789999888775444444445544443
No 197
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=24.83 E-value=95 Score=28.09 Aligned_cols=53 Identities=15% Similarity=0.110 Sum_probs=35.7
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC--ceEEe
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL--SFEFH 325 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv--pFeF~ 325 (492)
..-+|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.+++ +..|+ .++|.
T Consensus 78 ~~~~vLD~gcG~G~----~~~~la~~--~---~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~~ 132 (241)
T 3gdh_A 78 KCDVVVDAFCGVGG----NTIQFALT--G---MRVIAIDIDPVKIALARNNA----EVYGIADKIEFI 132 (241)
T ss_dssp CCSEEEETTCTTSH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHHH----HHTTCGGGEEEE
T ss_pred CCCEEEECccccCH----HHHHHHHc--C---CEEEEEECCHHHHHHHHHHH----HHcCCCcCeEEE
Confidence 44589999999985 33444544 2 68999999887776655554 45576 35553
No 198
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=24.36 E-value=50 Score=30.29 Aligned_cols=100 Identities=8% Similarity=0.087 Sum_probs=55.5
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc--eEEeeecccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS--FEFHPIAKKFGDIDAS 337 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp--FeF~~V~~~~eel~~~ 337 (492)
+.-.|+|+|.+.|.--. .||... |..++|+|+.+...++.+.+++ +..|++ .+|. ..+..+..++
T Consensus 71 ~~~~vLDiG~G~G~~~~----~la~~~---~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~v~~~--~~d~~~~~~~ 137 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSM----QFASIS---DDIHVTTIERNETMIQYAKQNL----ATYHFENQVRII--EGNALEQFEN 137 (232)
T ss_dssp TCCEEEEECCSSSHHHH----HHHTTC---TTCEEEEEECCHHHHHHHHHHH----HHTTCTTTEEEE--ESCGGGCHHH
T ss_pred CCCEEEEEeCchhHHHH----HHHHhC---CCCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEE--ECCHHHHHHh
Confidence 34579999999886332 344321 2479999999887776655544 445653 4443 2233222110
Q ss_pred cccccCC--CeEEEeeccccccCCCCccHHHHHHH-HhcCCcEEEEEe
Q 045494 338 MLQLRRG--ETLAVHWLQHSLYDATGPDWKTLRLL-EELSPRVVTLVE 382 (492)
Q Consensus 338 ~l~l~~g--EaLaVn~~lh~L~~~~~~~~~~L~~I-r~L~PkvvvlvE 382 (492)
.+ ++ +.|.++. .......+|+.+ +.|+|.-+++++
T Consensus 138 ~~---~~~fD~V~~~~-------~~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 138 VN---DKVYDMIFIDA-------AKAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp HT---TSCEEEEEEET-------TSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred hc---cCCccEEEEcC-------cHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 00 11 2233331 122244566555 778999999885
No 199
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=23.77 E-value=1.3e+02 Score=29.11 Aligned_cols=64 Identities=19% Similarity=0.135 Sum_probs=41.4
Q ss_pred hhHHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc
Q 045494 248 SNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS 321 (492)
Q Consensus 248 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp 321 (492)
+.+.+.+++.-...-.|+|+|.+.|.--..|.+.+ ++.-+|||++.+...++.+.+++ +..|++
T Consensus 106 ~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~------~~~~~v~avD~s~~~l~~a~~~~----~~~g~~ 169 (315)
T 1ixk_A 106 SSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLM------RNDGVIYAFDVDENRLRETRLNL----SRLGVL 169 (315)
T ss_dssp HHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHT------TTCSEEEEECSCHHHHHHHHHHH----HHHTCC
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHh------CCCCEEEEEcCCHHHHHHHHHHH----HHhCCC
Confidence 44455555554455579999999987544444432 12358999999888776665554 455763
No 200
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=23.20 E-value=1.2e+02 Score=27.40 Aligned_cols=39 Identities=10% Similarity=0.010 Sum_probs=25.6
Q ss_pred eeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHH
Q 045494 261 RVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLE 306 (492)
Q Consensus 261 ~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~e 306 (492)
.-.|+|+|.|.|. +...+ |.+-+ .-++|||+.+...+++
T Consensus 58 g~~VLDlGcGtG~-~~~~l---a~~~~---~~~V~gvD~s~~~l~~ 96 (210)
T 1nt2_A 58 DERVLYLGAASGT-TVSHL---ADIVD---EGIIYAVEYSAKPFEK 96 (210)
T ss_dssp SCEEEEETCTTSH-HHHHH---HHHTT---TSEEEEECCCHHHHHH
T ss_pred CCEEEEECCcCCH-HHHHH---HHHcC---CCEEEEEECCHHHHHH
Confidence 3479999999997 33333 33221 2389999998765543
No 201
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=23.06 E-value=87 Score=26.77 Aligned_cols=49 Identities=27% Similarity=0.570 Sum_probs=34.5
Q ss_pred EEEEcccc-CccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCce
Q 045494 263 HIIDLDIM-QGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLSF 322 (492)
Q Consensus 263 HIIDfgI~-~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvpF 322 (492)
=|||++-. ...+|..|++.|..+ | |++-||....+ ..+.+.|+..|+|+
T Consensus 50 VVlDl~~l~~~~dl~~L~~~l~~~--g---l~~vGV~g~~~------~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 50 VVINVSGLESPVNWPELHKIVTST--G---LRIIGVSGCKD------ASLKVEIDRMGLPL 99 (120)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHTT--T---CEEEEEESCCC------HHHHHHHHHHTCCE
T ss_pred EEEEccccCChHHHHHHHHHHHHc--C---CEEEEEeCCCc------HHHHHHHHHCCCCc
Confidence 37888743 467999999999866 2 88888864221 23446788889985
No 202
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=22.98 E-value=1.1e+02 Score=28.90 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=29.1
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHH
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLET 307 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~et 307 (492)
+.-.|+|+|.|.|.- +..||.+ | .++|||+.+...++.+
T Consensus 68 ~~~~vLD~GCG~G~~----~~~La~~--G---~~V~gvD~S~~~i~~a 106 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIE----MKWFADR--G---HTVVGVEISEIGIREF 106 (252)
T ss_dssp CSCEEEETTCTTCTH----HHHHHHT--T---CEEEEECSCHHHHHHH
T ss_pred CCCeEEEeCCCCcHH----HHHHHHC--C---CeEEEEECCHHHHHHH
Confidence 456899999998853 4556765 3 4899999998777654
No 203
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=22.80 E-value=75 Score=29.34 Aligned_cols=43 Identities=16% Similarity=0.236 Sum_probs=28.9
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHH
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGK 309 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~ 309 (492)
..-.|+|+|.|.|.--..|.+ +. |..++|||+.+...++.+.+
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~----~~---~~~~v~~vD~s~~~~~~a~~ 127 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFAD----AL---PEITTFGLDVSKVAIKAAAK 127 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHH----TC---TTSEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHH----hC---CCCeEEEEeCCHHHHHHHHH
Confidence 455899999999875544443 32 12489999988776655443
No 204
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=22.75 E-value=1.9e+02 Score=26.79 Aligned_cols=49 Identities=14% Similarity=0.189 Sum_probs=31.8
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCC
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGL 320 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgv 320 (492)
-+|+|+|.+.|.-=..|.+.+ |+.-+||+|+.+.+.++.+.+++ +..|+
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~------~~~~~v~~iD~s~~~~~~a~~~~----~~~g~ 129 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAI------PEDGKILAMDINKENYELGLPVI----KKAGV 129 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHS------CTTCEEEEEESCCHHHHHHHHHH----HHTTC
T ss_pred CEEEEeCCCcCHHHHHHHHhC------CCCCEEEEEECCHHHHHHHHHHH----HHcCC
Confidence 379999999886444444433 22359999998877665554443 44566
No 205
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=22.74 E-value=1.1e+02 Score=29.72 Aligned_cols=112 Identities=9% Similarity=-0.047 Sum_probs=60.7
Q ss_pred eEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHh-CCceEEeeecccccc-cccccc
Q 045494 262 VHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRL-GLSFEFHPIAKKFGD-IDASML 339 (492)
Q Consensus 262 VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~sl-gvpFeF~~V~~~~ee-l~~~~l 339 (492)
-+|+|+|.+.|. +...|+.+. |.-+||+|+.+.+.++.+.+++...+..+ +-.+++. ..+..+ +...
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~~~-- 165 (304)
T 2o07_A 97 RKVLIIGGGDGG----VLREVVKHP---SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH--VGDGFEFMKQN-- 165 (304)
T ss_dssp CEEEEEECTTSH----HHHHHTTCT---TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHHHHHHTC--
T ss_pred CEEEEECCCchH----HHHHHHHcC---CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHHHHHhhC--
Confidence 479999999885 445566552 45799999999888887777776655443 2234443 222211 1100
Q ss_pred cccCCCeEEEeeccccccCCCCccHHHHHH-HHhcCCcEEEEEeecC
Q 045494 340 QLRRGETLAVHWLQHSLYDATGPDWKTLRL-LEELSPRVVTLVEQEI 385 (492)
Q Consensus 340 ~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~-Ir~L~PkvvvlvEqea 385 (492)
-..=+.|+++...+.-.........+++. .+.|+|.-+++++...
T Consensus 166 -~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 166 -QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp -SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 00113455564322111100012345554 4788999998887544
No 206
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=22.20 E-value=62 Score=30.23 Aligned_cols=60 Identities=12% Similarity=0.201 Sum_probs=37.0
Q ss_pred cCCccchhhhhhhHHHHhhhc-cCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHH
Q 045494 237 VSPFIKFAHFTSNQAILEAFH-RRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLL 305 (492)
Q Consensus 237 ~sP~~kfa~ftANqAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~ 305 (492)
..||+.=+.+--- .+|+.+. ..+.-.|+|+|.+.|. +...|+.+ |+ -++|||+.+...++
T Consensus 14 ~~~yvsrg~~kL~-~~L~~~~~~~~g~~VLDiGcGtG~----~t~~la~~--g~--~~V~gvDis~~ml~ 74 (232)
T 3opn_A 14 KLRYVSRGGLKLE-KALKEFHLEINGKTCLDIGSSTGG----FTDVMLQN--GA--KLVYALDVGTNQLA 74 (232)
T ss_dssp CCCSSSTTHHHHH-HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHT--TC--SEEEEECSSCCCCC
T ss_pred CCCccCCcHHHHH-HHHHHcCCCCCCCEEEEEccCCCH----HHHHHHhc--CC--CEEEEEcCCHHHHH
Confidence 3567766655433 3344443 2234479999999996 45555655 32 28999998765444
No 207
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=22.14 E-value=1.4e+02 Score=30.93 Aligned_cols=119 Identities=13% Similarity=0.040 Sum_probs=63.7
Q ss_pred HHHHhhhccCceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHH---HHHHHHHHhCC---ceE
Q 045494 250 QAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGK---QLFNFAKRLGL---SFE 323 (492)
Q Consensus 250 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~---rL~~fA~slgv---pFe 323 (492)
..|++.+.-...-.|+|+|.|.|.+-..|.+.. + ..+++||+.+...++.+.. .+.+-++..|+ .++
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~----g---~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~ 304 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC----G---CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVE 304 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH----C---CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC----C---CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceE
Confidence 456666654555679999999997655544432 1 2489999998776655532 33444555674 344
Q ss_pred Eeeecccccccccccc--cccCCCeEEEeeccccccCCCCccHHHHHHHHhcCCcEEEEEe
Q 045494 324 FHPIAKKFGDIDASML--QLRRGETLAVHWLQHSLYDATGPDWKTLRLLEELSPRVVTLVE 382 (492)
Q Consensus 324 F~~V~~~~eel~~~~l--~l~~gEaLaVn~~lh~L~~~~~~~~~~L~~Ir~L~PkvvvlvE 382 (492)
|.. .....+ ...+ ...+=++|++|..++. +.....+-...+.|+|.-.+++-
T Consensus 305 ~i~-gD~~~~--~~~~~~~~~~FDvIvvn~~l~~----~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 305 FSL-KKSFVD--NNRVAELIPQCDVILVNNFLFD----EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp EEE-SSCSTT--CHHHHHHGGGCSEEEECCTTCC----HHHHHHHHHHHTTCCTTCEEEES
T ss_pred EEE-cCcccc--ccccccccCCCCEEEEeCcccc----ccHHHHHHHHHHhCCCCeEEEEe
Confidence 431 011111 0001 0112246767643321 11122334566889998766653
No 208
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=22.06 E-value=1.1e+02 Score=27.51 Aligned_cols=108 Identities=11% Similarity=0.101 Sum_probs=57.1
Q ss_pred ceeEEEEccccCccchHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHhCCc-eEEeeeccccccccccc
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATRNEGPPHLRMTGMGTSMEVLLETGKQLFNFAKRLGLS-FEFHPIAKKFGDIDASM 338 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~~~L~etg~rL~~fA~slgvp-FeF~~V~~~~eel~~~~ 338 (492)
+.-.|+|+|.|.|.-- ..||.+. |..++|||+.+...++.+.+++ +..|++ ++| +..+..++..
T Consensus 38 ~~~~vLDiGcG~G~~~----~~la~~~---p~~~v~giD~s~~~l~~a~~~~----~~~~~~nv~~--~~~d~~~l~~-- 102 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFI----SGMAKQN---PDINYIGIELFKSVIVTAVQKV----KDSEAQNVKL--LNIDADTLTD-- 102 (213)
T ss_dssp CCCEEEEECCTTSHHH----HHHHHHC---TTSEEEEECSCHHHHHHHHHHH----HHSCCSSEEE--ECCCGGGHHH--
T ss_pred CCceEEEEecCCCHHH----HHHHHHC---CCCCEEEEEechHHHHHHHHHH----HHcCCCCEEE--EeCCHHHHHh--
Confidence 3456999999988643 3344442 3479999999988776665554 345653 444 3333333210
Q ss_pred ccccCC--CeEEEeeccccccC----CCCccHHHHHHH-HhcCCcEEEEEee
Q 045494 339 LQLRRG--ETLAVHWLQHSLYD----ATGPDWKTLRLL-EELSPRVVTLVEQ 383 (492)
Q Consensus 339 l~l~~g--EaLaVn~~lh~L~~----~~~~~~~~L~~I-r~L~PkvvvlvEq 383 (492)
.+.++ +.|.+|+....... ..-....+|+.+ +-|+|.-.+++.-
T Consensus 103 -~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 103 -VFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp -HCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred -hcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 02222 23445532100000 000124566655 5689997777653
No 209
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=20.61 E-value=71 Score=30.93 Aligned_cols=51 Identities=14% Similarity=0.091 Sum_probs=35.4
Q ss_pred ceeEEEEccccCccchHHHHHHHhcC-CCCCCeEEEeecCCCHHHHHHHHHH
Q 045494 260 DRVHIIDLDIMQGLQWPALFHILATR-NEGPPHLRMTGMGTSMEVLLETGKQ 310 (492)
Q Consensus 260 ~~VHIIDfgI~~G~QWpsLiqaLA~R-~gGPP~LRITgI~~~~~~L~etg~r 310 (492)
+.+.|.|.|.+.|.-=-++-..|+.. +..+...+|+|++-+...|+.+.+.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~ 156 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSG 156 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHT
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhc
Confidence 46899999999997544444445543 2222247999999998888776654
Done!