Query 045501
Match_columns 381
No_of_seqs 381 out of 3873
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 04:10:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045501.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045501hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 4.4E-31 1.5E-35 231.9 17.1 208 120-332 33-244 (253)
2 2xai_A ASB-9, ankyrin repeat a 100.0 8.9E-31 3E-35 231.0 18.7 214 113-338 6-224 (261)
3 3utm_A Tankyrase-1; tankyrase, 100.0 1.4E-30 4.7E-35 239.3 19.5 222 112-340 27-319 (351)
4 1oy3_D Transcription factor in 100.0 1.2E-30 3.9E-35 232.5 18.0 206 112-322 11-269 (282)
5 3b7b_A Euchromatic histone-lys 100.0 2.8E-30 9.6E-35 224.3 18.5 205 112-322 13-221 (237)
6 1n11_A Ankyrin; clathrin, BAND 100.0 3.5E-30 1.2E-34 244.2 20.6 231 113-351 149-400 (437)
7 3ljn_A Hypothetical protein; a 100.0 3E-30 1E-34 238.8 19.6 236 110-352 20-314 (364)
8 4b93_B Ankyrin repeat domain-c 100.0 4.2E-31 1.4E-35 233.8 13.1 204 111-322 12-229 (269)
9 1oy3_D Transcription factor in 100.0 1.7E-30 5.6E-35 231.5 16.9 195 142-340 6-264 (282)
10 4b93_B Ankyrin repeat domain-c 100.0 1.6E-30 5.6E-35 230.0 15.0 195 142-340 8-224 (269)
11 1k1a_A B-cell lymphoma 3-encod 100.0 1.1E-30 3.6E-35 227.4 13.5 205 113-322 12-227 (241)
12 2dzn_A Probable 26S proteasome 100.0 5.8E-30 2E-34 220.9 18.0 204 113-319 5-216 (228)
13 4g8k_A 2-5A-dependent ribonucl 100.0 1.1E-29 3.8E-34 232.5 20.5 222 110-338 25-277 (337)
14 2xai_A ASB-9, ankyrin repeat a 100.0 5.2E-30 1.8E-34 226.1 17.6 190 144-340 2-205 (261)
15 1wdy_A 2-5A-dependent ribonucl 100.0 1.5E-29 5.2E-34 225.3 20.6 223 112-338 41-280 (285)
16 4gpm_A Engineered protein OR26 100.0 1.1E-29 3.9E-34 208.3 17.8 151 147-335 6-160 (169)
17 3d9h_A CDNA FLJ77766, highly s 100.0 6.6E-30 2.3E-34 228.4 17.0 198 112-319 61-263 (285)
18 1yyh_A HN1;, notch 1, ankyrin 100.0 2.7E-30 9.3E-35 226.8 13.7 197 135-339 2-228 (253)
19 1wdy_A 2-5A-dependent ribonucl 100.0 2.8E-29 9.5E-34 223.6 20.3 224 110-340 5-259 (285)
20 3aji_A 26S proteasome non-ATPa 100.0 1.6E-29 5.3E-34 218.7 18.1 201 114-322 10-216 (231)
21 2f8y_A Notch homolog 1, transl 100.0 3.6E-30 1.2E-34 221.5 13.1 205 127-336 8-216 (223)
22 3b7b_A Euchromatic histone-lys 100.0 2.3E-29 7.8E-34 218.5 18.3 192 142-339 8-215 (237)
23 2dzn_A Probable 26S proteasome 100.0 2.9E-29 9.8E-34 216.5 17.4 194 145-340 2-214 (228)
24 1n11_A Ankyrin; clathrin, BAND 100.0 4.5E-29 1.5E-33 236.5 20.1 221 113-338 50-315 (437)
25 4gpm_A Engineered protein OR26 100.0 2.9E-29 9.9E-34 205.8 16.0 154 113-306 7-164 (169)
26 1k1a_A B-cell lymphoma 3-encod 100.0 9.5E-29 3.3E-33 215.0 19.7 200 142-345 6-227 (241)
27 2rfa_A Transient receptor pote 100.0 4.6E-29 1.6E-33 215.9 16.9 188 113-335 6-221 (232)
28 1s70_B 130 kDa myosin-binding 100.0 3.5E-29 1.2E-33 225.1 14.2 201 110-318 40-272 (299)
29 3eu9_A Huntingtin-interacting 100.0 1.7E-28 5.9E-33 213.0 17.8 216 113-335 12-234 (240)
30 2fo1_E LIN-12 protein; beta-ba 100.0 1.5E-29 5.1E-34 234.8 11.8 219 112-335 127-370 (373)
31 3aji_A 26S proteasome non-ATPa 100.0 4E-28 1.4E-32 209.8 19.2 193 143-340 4-211 (231)
32 3utm_A Tankyrase-1; tankyrase, 100.0 3.1E-28 1.1E-32 223.5 18.8 204 112-320 60-322 (351)
33 2etb_A Transient receptor pote 100.0 4.4E-29 1.5E-33 219.4 12.1 195 112-335 4-245 (256)
34 3hra_A Ankyrin repeat family p 100.0 7E-28 2.4E-32 203.7 17.0 181 114-334 9-201 (201)
35 3kea_A K1L; tropism, ANK repea 100.0 3.3E-28 1.1E-32 217.3 13.8 216 120-349 10-242 (285)
36 3ljn_A Hypothetical protein; a 100.0 1.6E-28 5.4E-33 227.2 11.6 191 142-339 17-249 (364)
37 2rfm_A Putative ankyrin repeat 100.0 8.3E-28 2.8E-32 201.9 14.3 151 142-330 32-186 (192)
38 1ikn_D Protein (I-kappa-B-alph 100.0 1.2E-28 4.1E-33 214.0 8.2 190 142-335 5-208 (236)
39 4g8k_A 2-5A-dependent ribonucl 99.9 5.9E-27 2E-31 214.3 19.6 221 113-338 62-300 (337)
40 2pnn_A Transient receptor pote 99.9 4.7E-28 1.6E-32 214.9 11.5 198 111-335 14-257 (273)
41 3jxi_A Vanilloid receptor-rela 99.9 9.9E-28 3.4E-32 211.2 12.9 196 112-334 7-248 (260)
42 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.2E-26 4.1E-31 190.7 17.6 155 142-334 11-169 (169)
43 3v31_A Ankyrin repeat family A 99.9 6.3E-27 2.1E-31 191.9 15.8 148 144-329 2-153 (167)
44 3v30_A DNA-binding protein rfx 99.9 3.9E-27 1.3E-31 194.1 13.9 146 146-328 3-152 (172)
45 1awc_B Protein (GA binding pro 99.9 1.5E-26 5.3E-31 186.8 16.9 142 145-325 2-147 (153)
46 1sw6_A Regulatory protein SWI6 99.9 5.8E-28 2E-32 220.0 9.3 194 114-322 101-327 (327)
47 2rfa_A Transient receptor pote 99.9 8.1E-27 2.8E-31 201.8 15.5 158 144-339 2-202 (232)
48 4hbd_A KN motif and ankyrin re 99.9 4.3E-27 1.5E-31 209.1 13.7 175 119-332 85-271 (276)
49 2fo1_E LIN-12 protein; beta-ba 99.9 3.7E-28 1.3E-32 225.4 6.6 217 113-339 97-351 (373)
50 3d9h_A CDNA FLJ77766, highly s 99.9 9.4E-27 3.2E-31 207.9 14.5 184 112-306 94-282 (285)
51 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.6E-26 5.5E-31 188.4 14.6 154 143-335 3-161 (162)
52 3kea_A K1L; tropism, ANK repea 99.9 4.4E-27 1.5E-31 210.0 12.2 198 112-334 33-244 (285)
53 3f6q_A Integrin-linked protein 99.9 1.7E-26 5.8E-31 191.7 13.8 159 143-338 3-165 (179)
54 3twr_A Tankyrase-2; ankyrin re 99.9 1.9E-26 6.4E-31 188.7 12.2 153 142-332 5-161 (165)
55 3eu9_A Huntingtin-interacting 99.9 6.1E-26 2.1E-30 196.8 15.4 193 142-339 6-215 (240)
56 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.4E-25 4.8E-30 181.6 16.1 145 145-328 2-150 (156)
57 3hra_A Ankyrin repeat family p 99.9 1.2E-25 4E-30 190.0 15.9 161 142-339 2-183 (201)
58 2etb_A Transient receptor pote 99.9 2.1E-26 7.1E-31 202.3 11.3 144 144-321 1-182 (256)
59 1s70_B 130 kDa myosin-binding 99.9 1.9E-26 6.5E-31 207.2 10.2 182 112-300 75-286 (299)
60 2f8y_A Notch homolog 1, transl 99.9 6.1E-25 2.1E-29 188.7 18.7 187 112-305 27-218 (223)
61 2rfm_A Putative ankyrin repeat 99.9 9.2E-26 3.1E-30 189.4 12.8 128 211-339 31-172 (192)
62 3v30_A DNA-binding protein rfx 99.9 1.5E-25 5E-30 184.7 13.6 161 114-314 6-171 (172)
63 1ikn_D Protein (I-kappa-B-alph 99.9 3.7E-27 1.3E-31 204.5 4.1 203 113-320 11-228 (236)
64 3jxi_A Vanilloid receptor-rela 99.9 5.2E-26 1.8E-30 200.2 11.1 166 142-339 2-230 (260)
65 1sw6_A Regulatory protein SWI6 99.9 2.3E-27 7.8E-32 216.1 2.2 207 124-340 33-322 (327)
66 1bi7_B P16INK4A, MTS1, multipl 99.9 6.3E-26 2.1E-30 183.8 10.0 127 211-339 8-149 (156)
67 1d9s_A Cyclin-dependent kinase 99.9 6.4E-26 2.2E-30 179.4 9.6 124 209-334 6-134 (136)
68 1awc_B Protein (GA binding pro 99.9 3.3E-25 1.1E-29 178.9 12.2 125 215-340 2-139 (153)
69 2vge_A RELA-associated inhibit 99.9 4.7E-27 1.6E-31 202.8 1.0 175 128-340 3-194 (229)
70 2jab_A H10-2-G3; HER2, darpin, 99.9 4.4E-25 1.5E-29 174.5 12.3 123 211-334 10-136 (136)
71 3twr_A Tankyrase-2; ankyrin re 99.9 7.1E-25 2.4E-29 179.3 12.3 127 212-339 5-146 (165)
72 3v31_A Ankyrin repeat family A 99.9 6.9E-25 2.3E-29 179.7 11.8 125 214-339 2-140 (167)
73 2y1l_E Darpin-8.4; hydrolase-i 99.9 4.5E-24 1.5E-28 175.3 16.4 152 110-301 14-169 (169)
74 1ihb_A P18-INK4C(INK6), cyclin 99.9 1E-24 3.4E-29 177.7 12.3 152 111-303 6-162 (162)
75 1bi7_B P16INK4A, MTS1, multipl 99.9 5.5E-25 1.9E-29 178.2 10.7 138 142-318 9-151 (156)
76 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.9E-25 9.8E-30 193.1 9.4 142 143-323 3-151 (239)
77 3c5r_A BARD-1, BRCA1-associate 99.9 1.7E-25 5.9E-30 177.1 7.2 112 211-323 6-121 (137)
78 3f6q_A Integrin-linked protein 99.9 5.4E-24 1.8E-28 176.5 16.0 127 213-340 3-144 (179)
79 3aaa_C Myotrophin, protein V-1 99.9 2.5E-24 8.5E-29 167.1 12.5 108 211-319 3-114 (123)
80 2pnn_A Transient receptor pote 99.9 8.9E-25 3E-29 193.8 11.2 222 70-316 13-272 (273)
81 4hbd_A KN motif and ankyrin re 99.9 8E-25 2.7E-29 194.4 10.9 129 211-340 107-256 (276)
82 3t8k_A Uncharacterized protein 99.9 3.3E-25 1.1E-29 184.7 7.3 142 145-324 6-167 (186)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.9 7.1E-24 2.4E-28 164.8 13.0 120 214-334 1-124 (126)
84 3hve_A Gigaxonin; ubiquitin, c 99.9 3.1E-24 1.1E-28 188.1 12.0 161 1-191 22-184 (256)
85 3htm_A Speckle-type POZ protei 99.9 1.5E-24 5E-29 178.7 8.4 141 3-175 27-167 (172)
86 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.9E-25 2.4E-29 190.6 5.2 171 111-322 6-192 (239)
87 2vge_A RELA-associated inhibit 99.9 1.4E-24 4.6E-29 187.3 7.0 135 204-339 10-161 (229)
88 3t8k_A Uncharacterized protein 99.9 1.1E-24 3.6E-29 181.6 5.6 139 215-353 6-179 (186)
89 3i3n_A Kelch-like protein 11; 99.9 8.9E-25 3E-29 194.0 5.2 164 2-191 24-192 (279)
90 1d9s_A Cyclin-dependent kinase 99.9 5.6E-24 1.9E-28 168.1 8.7 123 142-303 9-136 (136)
91 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.6E-23 5.5E-28 169.4 10.9 122 215-338 2-137 (156)
92 3deo_A Signal recognition part 99.9 2.5E-23 8.5E-28 173.2 10.6 110 212-323 41-155 (183)
93 3ehr_A Osteoclast-stimulating 99.9 2.7E-23 9.2E-28 178.4 10.0 112 212-324 70-186 (222)
94 2vkp_A BTB/POZ domain-containi 99.9 1.4E-22 4.7E-27 153.5 12.0 103 3-135 1-107 (109)
95 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.3E-22 1.5E-26 154.6 14.9 122 144-303 1-126 (126)
96 2if5_A Zinc finger and BTB dom 99.9 2.8E-23 9.5E-28 160.1 7.2 102 3-133 18-119 (120)
97 2ppi_A Gigaxonin; BTB domain, 99.9 5.7E-23 2E-27 163.1 9.0 104 2-132 39-142 (144)
98 1r29_A B-cell lymphoma 6 prote 99.9 5.6E-23 1.9E-27 160.0 8.7 104 2-134 21-124 (127)
99 3ui2_A Signal recognition part 99.9 1.1E-22 3.6E-27 177.3 11.2 110 212-323 42-156 (244)
100 3b84_A Zinc finger and BTB dom 99.9 1.8E-23 6.2E-28 160.7 5.6 100 2-134 16-115 (119)
101 2jab_A H10-2-G3; HER2, darpin, 99.9 7.1E-22 2.4E-26 156.0 14.2 122 142-301 11-136 (136)
102 4eoz_A Speckle-type POZ protei 99.9 8.2E-24 2.8E-28 169.0 2.3 127 3-161 18-144 (145)
103 1buo_A POZ domain, protein (pr 99.9 3.8E-23 1.3E-27 159.4 5.4 100 2-135 20-119 (121)
104 2vpk_A Myoneurin; transcriptio 99.9 8.4E-23 2.9E-27 156.4 7.0 101 2-133 14-114 (116)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.9 7.7E-22 2.6E-26 144.9 11.4 89 214-303 1-93 (93)
106 2yy9_A Zinc finger and BTB dom 99.9 4.8E-23 1.6E-27 161.8 5.2 102 2-136 17-118 (135)
107 2q81_A MIZ-1 protein; BTB/POZ 99.9 6.8E-23 2.3E-27 157.4 5.9 98 2-133 19-116 (119)
108 2l6b_A NR1C; ankyrin, consensu 99.9 2.4E-22 8.2E-27 153.8 8.3 104 211-315 5-112 (115)
109 3hqi_A Speckle-type POZ protei 99.9 1.7E-22 5.8E-27 182.4 8.0 136 5-172 169-304 (312)
110 1dcq_A PYK2-associated protein 99.9 3.1E-21 1.1E-25 171.1 15.8 187 142-334 63-261 (278)
111 2z8h_A Transcription regulator 99.9 1.4E-22 4.9E-27 159.9 5.9 103 3-135 29-131 (138)
112 2b0o_E UPLC1; arfgap, structur 99.9 1.6E-20 5.6E-25 168.4 18.1 126 213-339 149-291 (301)
113 2b0o_E UPLC1; arfgap, structur 99.9 1E-21 3.6E-26 176.1 10.2 141 145-323 151-298 (301)
114 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.3E-21 1.1E-25 141.5 10.1 92 243-335 1-92 (93)
115 3ga1_A Nucleus accumbens-assoc 99.8 1.7E-22 5.9E-27 157.6 2.4 102 2-135 25-126 (129)
116 2ihc_A Transcription regulator 99.8 6.8E-23 2.3E-27 158.6 0.1 101 2-132 21-121 (124)
117 3ohu_A Transcription regulator 99.8 8.5E-23 2.9E-27 158.5 0.1 99 2-130 24-122 (125)
118 2aja_A Ankyrin repeat family p 99.8 1E-22 3.6E-27 187.6 0.0 153 120-323 76-237 (376)
119 3lvq_E ARF-GAP with SH3 domain 99.8 7E-21 2.4E-25 182.9 12.7 123 215-338 132-267 (497)
120 3ehr_A Osteoclast-stimulating 99.8 3.1E-21 1.1E-25 165.5 8.9 133 142-312 70-207 (222)
121 3jue_A Arfgap with coiled-coil 99.8 6.7E-21 2.3E-25 174.9 11.5 119 212-331 196-321 (368)
122 3fkc_A Transcriptional regulat 99.8 7.8E-22 2.7E-26 150.5 3.0 92 2-127 23-115 (116)
123 3c5r_A BARD-1, BRCA1-associate 99.8 1.7E-20 5.8E-25 148.2 9.9 101 241-342 7-117 (137)
124 3aaa_C Myotrophin, protein V-1 99.8 1.9E-20 6.3E-25 145.1 9.4 99 241-340 4-112 (123)
125 3m5b_A Zinc finger and BTB dom 99.8 4.5E-21 1.5E-25 146.6 5.1 92 5-134 25-116 (119)
126 3ui2_A Signal recognition part 99.8 1.9E-20 6.7E-25 162.9 9.8 134 142-331 42-180 (244)
127 3deo_A Signal recognition part 99.8 3.2E-20 1.1E-24 154.3 10.3 131 142-328 41-176 (183)
128 3lvq_E ARF-GAP with SH3 domain 99.8 9.1E-20 3.1E-24 175.2 14.1 137 146-314 133-276 (497)
129 2l6b_A NR1C; ankyrin, consensu 99.8 3E-20 1E-24 142.0 8.4 98 240-338 5-112 (115)
130 3jue_A Arfgap with coiled-coil 99.8 4.6E-19 1.6E-23 162.6 12.8 143 144-322 198-348 (368)
131 1dcq_A PYK2-associated protein 99.8 1E-18 3.5E-23 154.9 14.7 127 146-304 131-264 (278)
132 2zgd_A 3 repeat synthetic anky 99.8 7E-19 2.4E-23 133.3 9.7 84 239-323 19-102 (110)
133 2aja_A Ankyrin repeat family p 99.8 1.2E-20 4.1E-25 173.8 -1.8 120 212-333 89-221 (376)
134 2zgd_A 3 repeat synthetic anky 99.7 6E-18 2E-22 128.1 9.7 86 211-297 20-109 (110)
135 2ast_A S-phase kinase-associat 99.3 1.8E-11 6.2E-16 98.0 9.8 126 13-154 3-137 (159)
136 4ajy_C Transcription elongatio 99.1 2.4E-10 8.1E-15 83.3 7.2 80 13-121 4-96 (97)
137 1fs1_B SKP1, cyclin A/CDK2-ass 98.8 1.2E-08 4.2E-13 79.6 9.0 124 13-156 4-134 (141)
138 2p1m_A SKP1-like protein 1A; F 98.6 1.9E-08 6.6E-13 80.3 3.6 122 13-153 6-135 (160)
139 2fnj_C Transcription elongatio 97.9 2.8E-05 9.7E-10 55.9 6.2 92 13-122 3-96 (96)
140 3drz_A BTB/POZ domain-containi 97.9 0.00014 4.7E-09 53.5 10.0 96 12-133 7-104 (107)
141 1hv2_A Elongin C, ELC1; protei 97.8 2.4E-05 8.3E-10 56.6 5.5 93 13-122 6-99 (99)
142 3v7d_A Suppressor of kinetocho 97.7 0.00023 8E-09 56.9 9.1 127 12-151 8-141 (169)
143 3drx_A BTB/POZ domain-containi 96.7 0.011 3.9E-07 48.0 9.6 107 7-139 8-116 (202)
144 1vcb_B Protein (elongin C); tu 96.6 0.0026 9E-08 46.9 4.7 93 12-122 18-112 (112)
145 3kvt_A Potassium channel prote 92.5 0.06 2E-06 39.7 2.3 85 13-125 7-92 (115)
146 1s1g_A Potassium voltage-gated 91.2 0.24 8.2E-06 37.0 4.4 85 12-125 14-99 (124)
147 2nz0_B Potassium voltage-gated 89.1 0.37 1.3E-05 36.8 3.9 85 12-125 36-121 (140)
148 1nn7_A Potassium channel KV4.2 87.1 0.68 2.3E-05 33.3 4.1 82 13-125 2-86 (105)
149 1t1d_A Protein (potassium chan 86.4 3.7 0.00013 29.1 7.6 85 13-126 3-90 (100)
150 2eqx_A Kelch repeat and BTB do 60.3 6.7 0.00023 27.9 3.1 52 142-193 10-63 (105)
151 2r9r_B Paddle chimera voltage 38.0 28 0.00096 32.7 4.3 85 13-126 54-141 (514)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=4.4e-31 Score=231.91 Aligned_cols=208 Identities=16% Similarity=0.007 Sum_probs=156.5
Q ss_pred cCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhcc
Q 045501 120 FQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQ 199 (381)
Q Consensus 120 ~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 199 (381)
.+..++++++++.+.+++... +.+|.||||+|+.+|..++++.+++.++ +++..+..+.+|++.+...........+
T Consensus 33 ~~~~~~v~~Ll~~g~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~L 109 (253)
T 1yyh_A 33 EDAPAVISDFIYQGASLHNQT-DRTGETALHLAARYSRSDAAKRLLEASA--DANIQDNMGRTPLHAAVSADAQGVFQIL 109 (253)
T ss_dssp -------------------CC-CTTSCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCChHHHHHHHHccCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 347789999999999886542 6799999999999999999999999865 6888888899998887764333322222
Q ss_pred ccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhccCCCCcccC
Q 045501 200 ESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKD 275 (381)
Q Consensus 200 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d 275 (381)
... ....++..+..|.||||+|+..|+.+++++|++.| +++ ..|+||||+|+..|+ .+++++|+++|++++.+|
T Consensus 110 l~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~ 187 (253)
T 1yyh_A 110 IRN-RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN-VDAAVVLLKNGANKDMQN 187 (253)
T ss_dssp HHS-TTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTC-HHHHHHHHHTTCCTTCCC
T ss_pred HHc-CCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCcC
Confidence 211 11123335788999999999999999999999999 664 779999999999986 778899999999999999
Q ss_pred CCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhh
Q 045501 276 ARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATK 332 (381)
Q Consensus 276 ~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~ 332 (381)
..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..++...+..+..
T Consensus 188 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~ 244 (253)
T 1yyh_A 188 NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDL 244 (253)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999877555544433
No 2
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=8.9e-31 Score=231.04 Aligned_cols=214 Identities=14% Similarity=0.017 Sum_probs=173.4
Q ss_pred HHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHh
Q 045501 113 LMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKS 192 (381)
Q Consensus 113 ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (381)
.|+.|...+..++++++++.+.+++.. +.+|.||||+|+..|+.++++.+++.++ +++..+..+.+|++.+.....
T Consensus 6 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 6 PMHEAAIHGHQLSLRNLISQGWAVNII--TADHVSPLHEACLGGHLSCVKILLKHGA--QVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHcCC
Confidence 577888889999999999999999888 7899999999999999999999999865 788888889999887766433
Q ss_pred hhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhcc
Q 045501 193 LRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMD 267 (381)
Q Consensus 193 ~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~ 267 (381)
......+. .+++++ .+..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|+..|+ .+++++|+++
T Consensus 82 ~~~v~~Ll~~g~~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ 156 (261)
T 2xai_A 82 WDCVNLLLQHGASVQ----PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ-RACVKKLLES 156 (261)
T ss_dssp HHHHHHHHHTTCCSS----CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC-HHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCC----CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCC-HHHHHHHHHc
Confidence 33222221 222322 2456899999999999999999999999 654 778999999999976 6788888889
Q ss_pred CCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcCCCCC
Q 045501 268 LAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQGQETN 338 (381)
Q Consensus 268 ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g~t~~ 338 (381)
|+++|. |..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+.. +..+..+...+..+.
T Consensus 157 g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~--~~~~~~ll~~~~~~~ 224 (261)
T 2xai_A 157 GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLEREGPPS 224 (261)
T ss_dssp TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--CTHHHHHHHC-CCCC
T ss_pred CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc--ccHHHHHHhccCCcc
Confidence 999995 88899999999999999999999999999999999999999999854 334444555544433
No 3
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.4e-30 Score=239.28 Aligned_cols=222 Identities=23% Similarity=0.117 Sum_probs=181.3
Q ss_pred HHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHH
Q 045501 112 ELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIK 191 (381)
Q Consensus 112 ~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (381)
.++.++...+...+..++.+.+.+++.. +..|.||||+|+.+|+.++++.+++.+. +++..+..+.+|++.+....
T Consensus 27 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g 102 (351)
T 3utm_A 27 ELLEAARSGNEEKLMALLTPLNVNCHAS--DGRKSTPLHLAAGYNRVRIVQLLLQHGA--DVHAKDKGGLVPLHNACSYG 102 (351)
T ss_dssp HHHHHHHHTCHHHHHHHCCTTTTTCCCS--STTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTT
T ss_pred hHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCccCCCCCcHHHHHHHCC
Confidence 3455555555555666666667887777 7899999999999999999999999865 68888888999988776533
Q ss_pred hhhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC----------------------------
Q 045501 192 SLRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---------------------------- 241 (381)
Q Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---------------------------- 241 (381)
.......+. .++++ +..+..|.||||+|+..|+.+++++|++.| +++
T Consensus 103 ~~~iv~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~ 179 (351)
T 3utm_A 103 HYEVTELLLKHGACV---NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG 179 (351)
T ss_dssp CHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc
Confidence 222222211 22222 224788999999999999999999999998 542
Q ss_pred -----------------------------CCCchHHHHHHHcCC--hHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCC
Q 045501 242 -----------------------------LDDAYALHYAAAYCN--PKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNE 290 (381)
Q Consensus 242 -----------------------------~~g~t~Lh~A~~~g~--~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~ 290 (381)
..|.||||+|+..++ ..+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 259 (351)
T 3utm_A 180 HSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAH 259 (351)
T ss_dssp HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCC
Confidence 356799999999853 3789999999999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCch
Q 045501 291 PEVMVTLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 291 ~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~~ 340 (381)
.+++++|+++|++++.+|..|+||||+|+..+ +|++++..|..|.||+..
T Consensus 260 ~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~ 319 (351)
T 3utm_A 260 NDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQM 319 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhh
Confidence 99999999999999999999999999999998 699999999999998643
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=1.2e-30 Score=232.55 Aligned_cols=206 Identities=15% Similarity=0.031 Sum_probs=154.9
Q ss_pred HHHHHHHHcCHHHHHHHHHHHhhh---HHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHH
Q 045501 112 ELMYASAAFQMKELVFLLQLWLRS---MVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSS 188 (381)
Q Consensus 112 ~ll~~A~~~~~~~l~~~l~~~~~~---~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (381)
..|+.|...+..++++++++.+.+ ++.. +..|.||||+|+..|+.++++.+++.++ +++..+..+.+|++.+.
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~g~tpL~~A~ 86 (282)
T 1oy3_D 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ--NDLGQTALHLAAILGEASTVEKLYAAGA--GVLVAERGGHTALHLAC 86 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTC--CSSCCCTTSCCHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCCCCCCCCCHHHHHH
Confidence 458888999999999999999987 5556 6889999999999999999999999966 67788888889877765
Q ss_pred HHHhhhhhhccc-cccCC--------------------------------------------CCCCCCCCCCccHHHHHH
Q 045501 189 EIKSLRVKSNQE-SEANT--------------------------------------------KEVDPLREKTVRRIHKAL 223 (381)
Q Consensus 189 ~l~~~~~~~~~~-~~~~~--------------------------------------------~~~~~~~~~g~t~L~~A~ 223 (381)
..........+. .++.. ..++..+..|.||||+|+
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 166 (282)
T 1oy3_D 87 RVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAV 166 (282)
T ss_dssp TTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHH
T ss_pred HcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHH
Confidence 421111111110 00000 013345788999999999
Q ss_pred hcCCHHHHHHHHhCC-CCC----CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHH
Q 045501 224 DTDDFELLTLLLDVS-NVT----LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLL 298 (381)
Q Consensus 224 ~~~~~~~v~~Ll~~g-~in----~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll 298 (381)
..|+.+++++|++.| +++ ..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 167 ~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~-~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 245 (282)
T 1oy3_D 167 IHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQA-ASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR 245 (282)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCC-HHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHH
Confidence 999999999999999 664 349999999999976 67888888999999999999999999999999999999999
Q ss_pred hCCCCCcccCCCCCCHHHHHHHhc
Q 045501 299 SKGACASETTSDWQTAVAICRRVT 322 (381)
Q Consensus 299 ~~ga~~~~~d~~g~tpL~~A~~~~ 322 (381)
++|++++.+|..|.|||++|....
T Consensus 246 ~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 246 AHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HTTCCCCCCC--------------
T ss_pred HcCCCcCcCCCcccccccccCCcc
Confidence 999999999999999999998654
No 5
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=2.8e-30 Score=224.27 Aligned_cols=205 Identities=18% Similarity=0.125 Sum_probs=161.0
Q ss_pred HHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHH
Q 045501 112 ELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIK 191 (381)
Q Consensus 112 ~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (381)
..|+.|...+..++++++++.+.+++.. +.+|.||||+|+..|..++++.+++.+. +++..+..+.+|++.+....
T Consensus 13 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 13 SPLHAAAEAGHVDICHMLVQAGANIDTC--SEDQRTPLMEAAENNHLEAVKYLIKAGA--LVDPKDAEGSTCLHLAAKKG 88 (237)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHTTTC--CCCCCCTTSCCHHHHHHHTT
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCcCcc--CCCCCCHHHHHHHhCCHHHHHHHHhCCC--CCCCCCCCCCcHHHHHHHcC
Confidence 4578888888899999999999998887 7899999999999999999999998855 56777777888877765533
Q ss_pred hhhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhcc
Q 045501 192 SLRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMD 267 (381)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ 267 (381)
.......+...+ ...++..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|++.
T Consensus 89 ~~~~~~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~ 166 (237)
T 3b7b_A 89 HYEVVQYLLSNG-QMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGC-VDIAEILLAA 166 (237)
T ss_dssp CHHHHHHHHTTT-CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC-HHHHHHHHTT
T ss_pred CHHHHHHHHhCC-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCC-HHHHHHHHHc
Confidence 222222211111 1112334677888888888888888888888888 55 3678888888888875 6788888888
Q ss_pred CCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc
Q 045501 268 LAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT 322 (381)
Q Consensus 268 ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 322 (381)
|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 167 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 167 KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTC
T ss_pred CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHH
Confidence 8888888888888888888888888888888888888888888888888887654
No 6
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=3.5e-30 Score=244.19 Aligned_cols=231 Identities=16% Similarity=0.087 Sum_probs=184.6
Q ss_pred HHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHh
Q 045501 113 LMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKS 192 (381)
Q Consensus 113 ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (381)
.++.|...+..++++++++++.+++.. +.+|.||||+|+..++.++++.+++.+. +++..+..+.+|++.+.....
T Consensus 149 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~ 224 (437)
T 1n11_A 149 PLHVAAKYGKVRVAELLLERDAHPNAA--GKNGLTPLHVAVHHNNLDIVKLLLPRGG--SPHSPAWNGYTPLHIAAKQNQ 224 (437)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCC--CSSCCCHHHHHHHTTCHHHHHHHGGGTC--CSCCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHhCCC--CCCCcCCCCCCHHHHHHHcCC
Confidence 466777777788888888888877776 6788888888888888888888888755 556666667777666654322
Q ss_pred hhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhcc
Q 045501 193 LRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMD 267 (381)
Q Consensus 193 ~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ 267 (381)
......+. .+++ ++..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++
T Consensus 225 ~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~ 300 (437)
T 1n11_A 225 VEVARSLLQYGGS---ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGH-VPVADVLIKH 300 (437)
T ss_dssp HHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC-HHHHHHHHHH
T ss_pred HHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHhC
Confidence 22111111 2222 2234678999999999999999999999999 55 4789999999999986 6788999999
Q ss_pred CCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCC
Q 045501 268 LAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQET 337 (381)
Q Consensus 268 ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~ 337 (381)
|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+ +|++++..|..|.||
T Consensus 301 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 380 (437)
T 1n11_A 301 GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTP 380 (437)
T ss_dssp TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCH
T ss_pred CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999998 689999999999999
Q ss_pred Cch------hhHHHHHHHHH
Q 045501 338 NKD------QLCIDVLEREM 351 (381)
Q Consensus 338 ~~~------~~~~~~l~~~~ 351 (381)
+.. ..++++|+...
T Consensus 381 l~~A~~~g~~~~~~~l~~~~ 400 (437)
T 1n11_A 381 LAIAKRLGYISVTDVLKVVT 400 (437)
T ss_dssp HHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHcCcHHHHHHHHhcc
Confidence 643 34566666543
No 7
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=3e-30 Score=238.78 Aligned_cols=236 Identities=13% Similarity=0.058 Sum_probs=187.8
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHH
Q 045501 110 AIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSE 189 (381)
Q Consensus 110 ~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (381)
....|+.|...+..++++++++.+++++.. +..|.||||+|+..|+.++++.+++.+. +.....+.+|++.+..
T Consensus 20 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~~~~~g~t~L~~A~~ 93 (364)
T 3ljn_A 20 NMEKIHVAARKGQTDEVRRLIETGVSPTIQ--NRFGCTALHLACKFGCVDTAKYLASVGE----VHSLWHGQKPIHLAVM 93 (364)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHCCHHHHHHHHHHCC----CCCCBTTBCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcccc--CCCCCcHHHHHHHcCCHHHHHHHHHCCC----CccccCCCCHHHHHHH
Confidence 567889999999999999999999999888 7899999999999999999999999965 2333467788665543
Q ss_pred ---------HHhh----hhhhccc-cccCC---C--CCCCCCCCCccHHHHHHhcC--CHHHHHHHHhCC-CCC---CCC
Q 045501 190 ---------IKSL----RVKSNQE-SEANT---K--EVDPLREKTVRRIHKALDTD--DFELLTLLLDVS-NVT---LDD 244 (381)
Q Consensus 190 ---------l~~~----~~~~~~~-~~~~~---~--~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g-~in---~~g 244 (381)
+++. +...... ..... . ..+..+..|.||||+|+..| +.+++++|++.| +++ ..|
T Consensus 94 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g 173 (364)
T 3ljn_A 94 ANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKAD 173 (364)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTS
T ss_pred cCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCC
Confidence 4444 2222110 00000 0 01114678999999999999 999999999999 654 789
Q ss_pred chHHHHHHHcCChHHHHHHHhccCCC-----CcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 045501 245 AYALHYAAAYCNPKVFKEVLNMDLAG-----LNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICR 319 (381)
Q Consensus 245 ~t~Lh~A~~~g~~~~~~~lL~~~ga~-----in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 319 (381)
.||||+|+..|+ .+++++|+++|++ +|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+
T Consensus 174 ~t~L~~A~~~g~-~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 252 (364)
T 3ljn_A 174 ETPLMRAMEFRN-REALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSV 252 (364)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCC-HHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 999999999986 7899999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HhcC----------CcChhH------------HhhcCCCCC-------chhhHHHHHHHHHh
Q 045501 320 RVTR----------RKDYLE------------ATKQGQETN-------KDQLCIDVLEREMR 352 (381)
Q Consensus 320 ~~~~----------~~~~~~------------~~~~g~t~~-------~~~~~~~~l~~~~~ 352 (381)
..++ |++++. .+..|++|+ ....+..+|+....
T Consensus 253 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~ 314 (364)
T 3ljn_A 253 RAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLD 314 (364)
T ss_dssp HTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHH
T ss_pred HhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHHH
Confidence 9985 444333 334455554 35667777776543
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=4.2e-31 Score=233.82 Aligned_cols=204 Identities=19% Similarity=0.162 Sum_probs=110.7
Q ss_pred HHHHHHHHHcCHHHHHHHHHHHhhhH--------HHHhhhcCchhHHHHHHHcCc-HHHHHHHHHhhhccCCCccccccc
Q 045501 111 IELMYASAAFQMKELVFLLQLWLRSM--------VEKALVENVIPILVAALHCQL-NQLRSVCIQRIAKSNLDNVCLEKE 181 (381)
Q Consensus 111 ~~ll~~A~~~~~~~l~~~l~~~~~~~--------~~~~~~~~~~t~L~~A~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ 181 (381)
.+.|..|...|..++++++++.+.+. +.. +..+.+||+.|+..+. ..+++.++..++ +++..+.+|.
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~--~~~~~t~L~~a~~~~~~~~~v~~Ll~~Ga--dvn~~d~~G~ 87 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAA--DPEFCHPLCQCPKCAPAQKRLAKVPASGL--GVNVTSQDGS 87 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC------------------------------------------CCC--CTTCCCTTSC
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCccccccccccccc--CccCCCHHHHHHHhCCHHHHHHHHHHCCC--CCCCcCCCCC
Confidence 45566777778888888888776542 223 5677888888887665 346666766654 5666666666
Q ss_pred CcHHHHHHHHhhhhhhcc-ccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCC
Q 045501 182 LPDEVSSEIKSLRVKSNQ-ESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCN 256 (381)
Q Consensus 182 ~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~ 256 (381)
+|++++...........+ ..++++ +..+..|.||+++|+..++.+++++|++.| ++| ..|+||||+|+..|+
T Consensus 88 TpLh~A~~~g~~~~v~~Ll~~~a~~---~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 88 SPLHVAALHGRADLIPLLLKHGANA---GARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGH 164 (269)
T ss_dssp CHHHHHHHTTCTTHHHHHHHTTCCT---TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTC
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCCc---CccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 666665442221111111 111111 123556677777777777777777777777 543 566777777777765
Q ss_pred hHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc
Q 045501 257 PKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT 322 (381)
Q Consensus 257 ~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 322 (381)
.+++++|+++|+|+|.+|..|+||||+|+..|+.+++++|+++|+|++++|..|+||||+|++++
T Consensus 165 -~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 165 -HELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp -GGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTC
T ss_pred -HHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCC
Confidence 45666666677777777777777777777777777777777777777777777777777776543
No 9
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=1.7e-30 Score=231.53 Aligned_cols=195 Identities=17% Similarity=0.072 Sum_probs=157.4
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhcc-CCCcccccccCcHHHHHHHHhhhhhhccc-cccCCCCCCCCCCCCccHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKS-NLDNVCLEKELPDEVSSEIKSLRVKSNQE-SEANTKEVDPLREKTVRRI 219 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L 219 (381)
+.+|.||||+|+..|+.++++.+++.+... .++..+..+.+|++.+...........+. .+++++ ..+..|.|||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~g~tpL 82 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL---VAERGGHTAL 82 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS---CCCTTSCCHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCHH
Confidence 689999999999999999999999986632 26677788999988877644333222222 333322 3478899999
Q ss_pred HHHHhcCCHHHHHHHHhCC-C-----------------------------------------------C---CCCCchHH
Q 045501 220 HKALDTDDFELLTLLLDVS-N-----------------------------------------------V---TLDDAYAL 248 (381)
Q Consensus 220 ~~A~~~~~~~~v~~Ll~~g-~-----------------------------------------------i---n~~g~t~L 248 (381)
|+|+..|+.+++++|++.| + + +..|.|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 162 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence 9999999999999999976 3 2 35799999
Q ss_pred HHHHHcCChHHHHHHHhccCCCCcccCCC-CCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc-----
Q 045501 249 HYAAAYCNPKVFKEVLNMDLAGLNLKDAR-GRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT----- 322 (381)
Q Consensus 249 h~A~~~g~~~~~~~lL~~~ga~in~~d~~-g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----- 322 (381)
|+|+..|+ .+++++|+++|++++.++.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+
T Consensus 163 ~~A~~~g~-~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v 241 (282)
T 1oy3_D 163 HVAVIHKD-AEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA 241 (282)
T ss_dssp HHHHHTTC-HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHH
T ss_pred HHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHH
Confidence 99999986 78889999999999999865 999999999999999999999999999999999999999999988
Q ss_pred -----CCcChhHHhhcCCCCCch
Q 045501 323 -----RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 323 -----~~~~~~~~~~~g~t~~~~ 340 (381)
+|++++..+..|.||+..
T Consensus 242 ~~Ll~~ga~~~~~~~~g~tpl~~ 264 (282)
T 1oy3_D 242 RLLRAHGAPEPEDGGDKLSPCSS 264 (282)
T ss_dssp HHHHHTTCCCCCCC---------
T ss_pred HHHHHcCCCcCcCCCcccccccc
Confidence 699999999999999754
No 10
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=230.03 Aligned_cols=195 Identities=17% Similarity=0.083 Sum_probs=148.4
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhcc------CCCcccccccCcHHHHHHHHhhhh--hhccccccCCCCCCCCCC
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKS------NLDNVCLEKELPDEVSSEIKSLRV--KSNQESEANTKEVDPLRE 213 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~ 213 (381)
|..+.++|+.|+..|+.++++.+++.+... ..+..+..+.+|+..+........ ......++++ +..|.
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv---n~~d~ 84 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV---NVTSQ 84 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCT---TCCCT
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC---CCcCC
Confidence 456789999999999999999999875531 133444556677665544322211 1112233333 34578
Q ss_pred CCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcC
Q 045501 214 KTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRN 289 (381)
Q Consensus 214 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~ 289 (381)
+|+||||+|+..|+.+++++|++.| ++ +..|.||+|+|+..++ .+++++|++.|+++|.+|..|+||||+|+..|
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~-~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGH-FQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC-HHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccCh-HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 9999999999999999999999999 65 4789999999999976 78899999999999999999999999999999
Q ss_pred ChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCch
Q 045501 290 EPEVMVTLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 290 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~~ 340 (381)
+.+++++|+++|+|+|.+|..|.||||+|+..+ +|++++.+|+.|+||+..
T Consensus 164 ~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~ 224 (269)
T 4b93_B 164 HHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDC 224 (269)
T ss_dssp CGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGG
T ss_pred CHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 999999999999999999999999999999998 699999999999999854
No 11
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.1e-30 Score=227.40 Aligned_cols=205 Identities=18% Similarity=0.083 Sum_probs=123.4
Q ss_pred HHHHHHHcCHHHHHHHHHH----HhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHH
Q 045501 113 LMYASAAFQMKELVFLLQL----WLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSS 188 (381)
Q Consensus 113 ll~~A~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (381)
.|+.|...+..++++++++ .+.+++.. +..|.||||+|+..|+.++++.+++.+. +++..+..+.+|++.+.
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~l~~A~ 87 (241)
T 1k1a_A 12 PLHIAVVQGNLPAVHRLVNLFQQGGRELDIY--NNLRQTPLHLAVITTLPSVVRLLVTAGA--SPMALDRHGQTAAHLAC 87 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc--cccCCCHHHHHHHcCCHHHHHHHHHcCC--CccccCCCCCCHHHHHH
Confidence 4666666676666666665 45555555 5677777888777777777777777654 45555556666655554
Q ss_pred HHHhhhhhhccc-cccC-CCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC----CCCchHHHHHHHcCChHHHH
Q 045501 189 EIKSLRVKSNQE-SEAN-TKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT----LDDAYALHYAAAYCNPKVFK 261 (381)
Q Consensus 189 ~l~~~~~~~~~~-~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in----~~g~t~Lh~A~~~g~~~~~~ 261 (381)
..........+. .+.. ...++..+..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|+..|+ .+++
T Consensus 88 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~-~~~v 166 (241)
T 1k1a_A 88 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS-LSMV 166 (241)
T ss_dssp HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC-HHHH
T ss_pred HcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC-HHHH
Confidence 322111111111 1110 0011223556666666666666666666666666 443 446666666666654 4566
Q ss_pred HHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc
Q 045501 262 EVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT 322 (381)
Q Consensus 262 ~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 322 (381)
++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 167 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 227 (241)
T 1k1a_A 167 QLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRR 227 (241)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHH
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcC
Confidence 6666666666666666666666666666666666666666666666666666666666554
No 12
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=5.8e-30 Score=220.86 Aligned_cols=204 Identities=18% Similarity=0.118 Sum_probs=127.3
Q ss_pred HHHHHHHcCHHHHHHHHHHHhhhHHH-HhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCc-ccccccCcHHHHHHH
Q 045501 113 LMYASAAFQMKELVFLLQLWLRSMVE-KALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDN-VCLEKELPDEVSSEI 190 (381)
Q Consensus 113 ll~~A~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 190 (381)
.|+.|...+..++++++++.+.+... . +.+|.||||+|+.+|+.++++.+++.+...+++. .+..+.+|++.+...
T Consensus 5 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~ 82 (228)
T 2dzn_A 5 PLHQACMENEFFKVQELLHSKPSLLLQK--DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCGGGTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHhcCccccccC--CCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc
Confidence 47788888889999999998887765 4 7899999999999999999999999864333333 444555665555443
Q ss_pred HhhhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhc
Q 045501 191 KSLRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNM 266 (381)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~ 266 (381)
........+...+....++..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|++
T Consensus 83 ~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~ 161 (228)
T 2dzn_A 83 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGS-LKLIELLCG 161 (228)
T ss_dssp CCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC-HHHHHHHHT
T ss_pred CCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCC-HHHHHHHHh
Confidence 222221111111000111223455666666666666666666666666 43 2456666666666654 455555555
Q ss_pred cC-CCCcccCCCCCcHHHHHHHcCChHHHHHHH-hCCCCCcccCCCCCCHHHHHH
Q 045501 267 DL-AGLNLKDARGRTVLHVAARRNEPEVMVTLL-SKGACASETTSDWQTAVAICR 319 (381)
Q Consensus 267 ~g-a~in~~d~~g~TpLh~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpL~~A~ 319 (381)
.| ++++.+|..|+||||+|+..|+.+++++|+ ++|++++.+|..|.|||++|+
T Consensus 162 ~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 162 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 216 (228)
T ss_dssp TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCS
T ss_pred cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHH
Confidence 55 666666666666666666666666666666 556666666666666666654
No 13
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=1.1e-29 Score=232.47 Aligned_cols=222 Identities=16% Similarity=0.046 Sum_probs=126.7
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHH
Q 045501 110 AIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSE 189 (381)
Q Consensus 110 ~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (381)
....|+.|...+..+++++|+++|++++... +++|.||||+|+.+|+.++++.+++.++ +++..+..+.++...+..
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~-~~~g~TpLh~A~~~g~~~iv~~Ll~~ga--~~~~~~~~~~~~~~~~~~ 101 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGA--DPVLRKKNGATPFILAAI 101 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHH
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCcCHHHHHHHcCCHHHHHHHHHcCC--chhhhccCCCchhHHHHh
Confidence 3457888889999999999999999998761 2469999999999999999999999876 455555555555444333
Q ss_pred HHhhhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC-------------CCCchHHHHHHHc
Q 045501 190 IKSLRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT-------------LDDAYALHYAAAY 254 (381)
Q Consensus 190 l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in-------------~~g~t~Lh~A~~~ 254 (381)
........... .+.+ ++..|..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|+..
T Consensus 102 ~~~~~~~~~~~~~~~~---~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~ 178 (337)
T 4g8k_A 102 AGSVKLLKLFLSKGAD---VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 178 (337)
T ss_dssp HTCHHHHHHHHTTTCC---TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHH
T ss_pred cccchhhHHhhhccch---hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHC
Confidence 22111111111 1111 1223445555555555555555555555555 321 2345555555555
Q ss_pred CChHHHHHHHh-ccCCCCcccCCCCCcHHHHHHHcCC----hHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc-------
Q 045501 255 CNPKVFKEVLN-MDLAGLNLKDARGRTVLHVAARRNE----PEVMVTLLSKGACASETTSDWQTAVAICRRVT------- 322 (381)
Q Consensus 255 g~~~~~~~lL~-~~ga~in~~d~~g~TpLh~A~~~~~----~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~------- 322 (381)
|+ .+++++|+ +.|+++|.+|..|+||||.++..+. ..++++|+++|++++.+|..|+||||+|+..+
T Consensus 179 g~-~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~ 257 (337)
T 4g8k_A 179 GH-VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 257 (337)
T ss_dssp TC-HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHH
T ss_pred CC-HHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHH
Confidence 54 23333333 3455555555555555555444332 23445555555555555555555555555544
Q ss_pred ----CCcChhHHhhcCCCCC
Q 045501 323 ----RRKDYLEATKQGQETN 338 (381)
Q Consensus 323 ----~~~~~~~~~~~g~t~~ 338 (381)
.|++++..|..|.||+
T Consensus 258 Ll~~~~~~vn~~d~~G~TpL 277 (337)
T 4g8k_A 258 LLEQEHIEINDTDSDGKTAL 277 (337)
T ss_dssp HHTSTTCCTTCBCTTSCBHH
T ss_pred HHHhcCCcccCcCCCCCCHH
Confidence 2455555555555554
No 14
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=5.2e-30 Score=226.10 Aligned_cols=190 Identities=15% Similarity=0.043 Sum_probs=163.0
Q ss_pred CchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccc-cccCCCCCCCCCCCCccHHHHH
Q 045501 144 NVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQE-SEANTKEVDPLREKTVRRIHKA 222 (381)
Q Consensus 144 ~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A 222 (381)
+|.||||+|+..|..++++.+++.+. +++..+..+.+|++.+...........+. .+++ ++..+..|.||||+|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A 76 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGW--AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ---VNGVTADWHTPLFNA 76 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC--CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHH
Confidence 58899999999999999999999865 68888889999988877644333222222 2323 233478899999999
Q ss_pred HhcCCHHHHHHHHhCC-CC--CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHh
Q 045501 223 LDTDDFELLTLLLDVS-NV--TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLS 299 (381)
Q Consensus 223 ~~~~~~~~v~~Ll~~g-~i--n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~ 299 (381)
+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (261)
T 2xai_A 77 CVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGH-VECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE 155 (261)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCc-HHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999 55 4779999999999986 789999999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCch
Q 045501 300 KGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 300 ~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~~ 340 (381)
+|++++. +..|.||||+|+..+ +|++++.+|..|.||+..
T Consensus 156 ~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~ 205 (261)
T 2xai_A 156 SGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVEL 205 (261)
T ss_dssp HTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred cCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhh
Confidence 9999995 899999999999988 699999999999999753
No 15
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1.5e-29 Score=225.32 Aligned_cols=223 Identities=18% Similarity=0.143 Sum_probs=178.0
Q ss_pred HHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHH
Q 045501 112 ELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIK 191 (381)
Q Consensus 112 ~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (381)
..|+.|...+..++++++++++.+++.. +.+|.||||+|+..|+.++++.+++.+. +++..+..+.+|++.+....
T Consensus 41 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~ 116 (285)
T 1wdy_A 41 TPLHNAVQMSREDIVELLLRHGADPVLR--KKNGATPFLLAAIAGSVKLLKLFLSKGA--DVNECDFYGFTAFMEAAVYG 116 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTC--CTTCBCTTCCBHHHHHHHTT
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCccCcccCCHHHHHHHhC
Confidence 3578888888899999999999988877 7889999999999999999999999855 67777888888877765433
Q ss_pred hhhhhhcc-ccccCCCCCCC-------CCCCCccHHHHHHhcCCHHHHHHHHhC-C-CC---CCCCchHHHHHHHcCCh-
Q 045501 192 SLRVKSNQ-ESEANTKEVDP-------LREKTVRRIHKALDTDDFELLTLLLDV-S-NV---TLDDAYALHYAAAYCNP- 257 (381)
Q Consensus 192 ~~~~~~~~-~~~~~~~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g-~i---n~~g~t~Lh~A~~~g~~- 257 (381)
.......+ ..+++++.... .+..|.||||+|+..|+.+++++|++. | ++ +..|.||||+|+..|+.
T Consensus 117 ~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 196 (285)
T 1wdy_A 117 KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 196 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTT
T ss_pred CHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccc
Confidence 22221111 12223222211 167789999999999999999999987 6 55 47789999999998753
Q ss_pred --HHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHh-CCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcC
Q 045501 258 --KVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLS-KGACASETTSDWQTAVAICRRVTRRKDYLEATKQG 334 (381)
Q Consensus 258 --~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g 334 (381)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++...+..+.+.|
T Consensus 197 ~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~G 276 (285)
T 1wdy_A 197 DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 276 (285)
T ss_dssp THHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred hHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcC
Confidence 678888889999999999999999999999999999999998 79999999999999999999988777777777777
Q ss_pred CCCC
Q 045501 335 QETN 338 (381)
Q Consensus 335 ~t~~ 338 (381)
..+.
T Consensus 277 a~~~ 280 (285)
T 1wdy_A 277 ASTD 280 (285)
T ss_dssp SCSC
T ss_pred CCCC
Confidence 7654
No 16
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.1e-29 Score=208.25 Aligned_cols=151 Identities=28% Similarity=0.277 Sum_probs=135.1
Q ss_pred hHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHhcC
Q 045501 147 PILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALDTD 226 (381)
Q Consensus 147 t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 226 (381)
+.|+.|+..|+.++++.+++.++ +++. +|..|+||||+|+..+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Ga--dvn~-----------------------------------~d~~g~t~l~~a~~~~ 48 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGA--DVNA-----------------------------------SDSDGRTPLHHAAENG 48 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTC--CTTC-----------------------------------CCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCC--CCCC-----------------------------------cCCCCCCHHHHHHHcC
Confidence 46899999999999999998855 3332 3788999999999999
Q ss_pred CHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCC
Q 045501 227 DFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGA 302 (381)
Q Consensus 227 ~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga 302 (381)
+.+++++|++.| ++ +..|+||||+|+..|+ .+++++|+++|+|+|.+|.+|+||||+|+..|+.+++++|+++|+
T Consensus 49 ~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~-~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga 127 (169)
T 4gpm_A 49 HKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH-KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CHHHHHHHHhcccchhhhccCCCCHHHHHHHcCC-HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999 66 4789999999999986 788999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCHHHHHHHhcCCcChhHHhhcCC
Q 045501 303 CASETTSDWQTAVAICRRVTRRKDYLEATKQGQ 335 (381)
Q Consensus 303 ~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g~ 335 (381)
|++.+|..|+||||+|+..++...+..+.+.|.
T Consensus 128 d~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 128 DVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 999999999999999999988777777777775
No 17
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=6.6e-30 Score=228.38 Aligned_cols=198 Identities=15% Similarity=0.042 Sum_probs=119.9
Q ss_pred HHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHH
Q 045501 112 ELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIK 191 (381)
Q Consensus 112 ~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (381)
..|+.|...+..++++++++.+.+++.. +.+|.||||+|+..|+.++++.+++.++ +++..+..+.+|++.+....
T Consensus 61 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~g~t~L~~A~~~~ 136 (285)
T 3d9h_A 61 SPMHEAAIHGHQLSLRNLISQGWAVNII--TADHVSPLHEACLGGHLSCVKILLKHGA--QVNGVTADWHTPLFNACVSG 136 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCEE--CTTCCCHHHHHHHTTCHHHHHHHHHTTC--CSSCCCTTCCCHHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHCCcHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHcC
Confidence 4578888889999999999999998887 7899999999999999999999998855 55555555555554443322
Q ss_pred hhhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhc
Q 045501 192 SLRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNM 266 (381)
Q Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~ 266 (381)
.......+. .+.+++ .+..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|+..|+ .+++++|++
T Consensus 137 ~~~~v~~Ll~~g~~~~----~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~-~~~v~~Ll~ 211 (285)
T 3d9h_A 137 SWDCVNLLLQHGASVQ----PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ-RACVKKLLE 211 (285)
T ss_dssp CHHHHHHHHHTTCCSS----CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC-HHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCC----CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc-HHHHHHHHH
Confidence 111111111 111111 1233555555555555555555555555 332 445555555555543 445555555
Q ss_pred cCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 045501 267 DLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICR 319 (381)
Q Consensus 267 ~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 319 (381)
.|++++. |..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 212 ~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 212 SGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp TTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC
T ss_pred CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc
Confidence 5555553 555555555555555555555555555555555555555555554
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=2.7e-30 Score=226.84 Aligned_cols=197 Identities=17% Similarity=0.114 Sum_probs=135.2
Q ss_pred hHHHHhhhcCchhHHHHHHHcC-------------cHHHHHHHHHhhhccCCC-cccccccCcHHHHHHHHhhhhhhccc
Q 045501 135 SMVEKALVENVIPILVAALHCQ-------------LNQLRSVCIQRIAKSNLD-NVCLEKELPDEVSSEIKSLRVKSNQE 200 (381)
Q Consensus 135 ~~~~~~~~~~~~t~L~~A~~~~-------------~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~ 200 (381)
+++.. |.+|.||||+|+.+| ..++++.+++.+. +++ ..+..+.+|++.+...........+.
T Consensus 2 dvn~~--d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 77 (253)
T 1yyh_A 2 DVNVR--GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGA--SLHNQTDRTGETALHLAARYSRSDAAKRLL 77 (253)
T ss_dssp ------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCC--CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccC--CcccccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 45566 789999999999977 7888888888865 343 34678899988776543322222221
Q ss_pred -cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC--CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCccc
Q 045501 201 -SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS--NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLK 274 (381)
Q Consensus 201 -~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~ 274 (381)
.++++ +..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|++.|++++.+
T Consensus 78 ~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~ 153 (253)
T 1yyh_A 78 EASADA---NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAV-EGMLEDLINSHADVNAV 153 (253)
T ss_dssp HTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTC-SSHHHHHHHTTCCTTCB
T ss_pred HcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCh-HHHHHHHHHcCCCCCCc
Confidence 22222 234788999999999999999999999998 44 4789999999999986 67888888999999999
Q ss_pred CCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCc
Q 045501 275 DARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNK 339 (381)
Q Consensus 275 d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~ 339 (381)
|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+ +|++++..|..|.||+.
T Consensus 154 d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 228 (253)
T 1yyh_A 154 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD 228 (253)
T ss_dssp CTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHH
Confidence 999999999999999999999999999999999999999999999988 68999999999999864
No 19
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=2.8e-29 Score=223.62 Aligned_cols=224 Identities=16% Similarity=0.042 Sum_probs=187.1
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHH
Q 045501 110 AIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSE 189 (381)
Q Consensus 110 ~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (381)
....|+.|...+..++++++++.+.+++... +..|.||||+|+..|..++++.+++.+. +++..+..+.+|++.+..
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~ 81 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGA--DPVLRKKNGATPFLLAAI 81 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHHH
Confidence 3567888999999999999999998886552 4678999999999999999999999966 677788889999887765
Q ss_pred HHhhhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC-------------CCCCchHHHHHHHc
Q 045501 190 IKSLRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV-------------TLDDAYALHYAAAY 254 (381)
Q Consensus 190 l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i-------------n~~g~t~Lh~A~~~ 254 (381)
.........+. .+.+ ++..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..
T Consensus 82 ~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 82 AGSVKLLKLFLSKGAD---VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HTCHHHHHHHHHTTCC---TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCC---CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHc
Confidence 43332222221 2222 2234788999999999999999999999999 55 35689999999999
Q ss_pred CChHHHHHHHhcc-CCCCcccCCCCCcHHHHHHHcCC----hHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc-------
Q 045501 255 CNPKVFKEVLNMD-LAGLNLKDARGRTVLHVAARRNE----PEVMVTLLSKGACASETTSDWQTAVAICRRVT------- 322 (381)
Q Consensus 255 g~~~~~~~lL~~~-ga~in~~d~~g~TpLh~A~~~~~----~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~------- 322 (381)
|+ .+++++|++. |++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|.||||+|+..+
T Consensus 159 ~~-~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 237 (285)
T 1wdy_A 159 GH-VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 237 (285)
T ss_dssp TC-HHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CC-HHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 87 5677777765 99999999999999999999999 89999999999999999999999999999987
Q ss_pred ----CCcChhHHhhcCCCCCch
Q 045501 323 ----RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 323 ----~~~~~~~~~~~g~t~~~~ 340 (381)
.|++++..|..|.||+..
T Consensus 238 Ll~~~g~~~~~~~~~g~t~l~~ 259 (285)
T 1wdy_A 238 LLEQEHIEINDTDSDGKTALLL 259 (285)
T ss_dssp HHHSSSCCTTCCCTTSCCHHHH
T ss_pred HHhccCCCccccCCCCCcHHHH
Confidence 588888888999998643
No 20
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=1.6e-29 Score=218.69 Aligned_cols=201 Identities=18% Similarity=0.122 Sum_probs=151.0
Q ss_pred HHHHHHcCHHHHHHHHHHHhhh-HHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHh
Q 045501 114 MYASAAFQMKELVFLLQLWLRS-MVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKS 192 (381)
Q Consensus 114 l~~A~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (381)
++.|...+..+.++.+++.+.. .+.. +.+|.||||+|+..|+.++++.+++.+. +++..+..+.+|++.+.....
T Consensus 10 l~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 10 ICNLAYSGKLDELKERILADKSLATRT--DQDSRTALHWACSAGHTEIVEFLLQLGV--PVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHHCGGGGGCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTC--CSCCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHhCCHHHHHHHHHhchhhhhcC--CCCCCCHHHHHHHcCcHHHHHHHHHhCC--CCCCcCCCCCCHHHHHHHcCH
Confidence 5566666656666565555443 4444 6899999999999999999999999855 677777778888777665433
Q ss_pred hhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhcc
Q 045501 193 LRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMD 267 (381)
Q Consensus 193 ~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ 267 (381)
......+. .+.++ +..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++
T Consensus 86 ~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ 161 (231)
T 3aji_A 86 DEIVKALLVKGAHV---NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGN-LKMVHILLFY 161 (231)
T ss_dssp HHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHT
T ss_pred HHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC-HHHHHHHHhc
Confidence 22222111 22222 224677888888888888888888888888 54 3668888888888875 6777888888
Q ss_pred CCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc
Q 045501 268 LAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT 322 (381)
Q Consensus 268 ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 322 (381)
|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+
T Consensus 162 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 216 (231)
T 3aji_A 162 KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGL 216 (231)
T ss_dssp TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHH
T ss_pred CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhH
Confidence 8888888888888888888888888888888888888888888888888887653
No 21
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=3.6e-30 Score=221.48 Aligned_cols=205 Identities=16% Similarity=0.003 Sum_probs=154.4
Q ss_pred HHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCC
Q 045501 127 FLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTK 206 (381)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 206 (381)
+++++.+.+++... +.+|.||||+|+.+|+.++++.+++.+. +++..+..+.+|++.+...........+... ...
T Consensus 8 ~~Ll~~g~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~ 83 (223)
T 2f8y_A 8 SDFIYQGASLHNQT-DRTGETALHLAARYSRSDAAKRLLEASA--DANIQDNMGRTPLHAAVSADAQGVFQILIRN-RAT 83 (223)
T ss_dssp ETTEETTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB-TTS
T ss_pred HHHHHcCCCccccc-CCCCCchHHHHHHcCCHHHHHHHHHcCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCC
Confidence 33444455544321 4566777777777777777777777644 5556666666666655443222211111100 011
Q ss_pred CCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHH
Q 045501 207 EVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVL 282 (381)
Q Consensus 207 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpL 282 (381)
.++..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+|||
T Consensus 84 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L 162 (223)
T 2f8y_A 84 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN-VDAAVVLLKNGANKDMQNNREETPL 162 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCCcCHH
Confidence 12234788999999999999999999999999 65 4779999999999976 7788889999999999999999999
Q ss_pred HHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcCCC
Q 045501 283 HVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQGQE 336 (381)
Q Consensus 283 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g~t 336 (381)
|+|+..|+.+++++|+++|++++.+|..|.|||++|+..++...+..+.+.|..
T Consensus 163 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 163 FLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred HHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999887777777777654
No 22
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=2.3e-29 Score=218.50 Aligned_cols=192 Identities=20% Similarity=0.189 Sum_probs=164.6
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccc-cccCCCCCCCCCCCCccHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQE-SEANTKEVDPLREKTVRRIH 220 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~ 220 (381)
+.+|.||||+|+..|..++++.+++.+. +++..+..+.+|++.+..-........+. .+++ ++..+..|.||||
T Consensus 8 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~ 82 (237)
T 3b7b_A 8 HQNKRSPLHAAAEAGHVDICHMLVQAGA--NIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL---VDPKDAEGSTCLH 82 (237)
T ss_dssp SCCSCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC---CCCCCTTSCCHHH
T ss_pred cCCCCCHHHHHHHcCcHHHHHHHHHcCC--CcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC---CCCCCCCCCcHHH
Confidence 6899999999999999999999999865 67778888999987776543222222211 2222 2234788999999
Q ss_pred HHHhcCCHHHHHHHHhCC--CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHH
Q 045501 221 KALDTDDFELLTLLLDVS--NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMV 295 (381)
Q Consensus 221 ~A~~~~~~~~v~~Ll~~g--~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~ 295 (381)
+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|++.|++++.+|..|+||||+|+..|+.++++
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 161 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH-VDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAE 161 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHH
Confidence 999999999999999998 44 4779999999999976 78899999999999999999999999999999999999
Q ss_pred HHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCc
Q 045501 296 TLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNK 339 (381)
Q Consensus 296 ~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~ 339 (381)
+|+++|++++.+|..|.||||+|+..+ +|++++.+|+.|.||+.
T Consensus 162 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~ 215 (237)
T 3b7b_A 162 ILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQ 215 (237)
T ss_dssp HHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHH
Confidence 999999999999999999999999988 69999999999999864
No 23
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=2.9e-29 Score=216.50 Aligned_cols=194 Identities=15% Similarity=0.037 Sum_probs=158.5
Q ss_pred chhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccc-cccCCCCCCCCCCCCccHHHHHH
Q 045501 145 VIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQE-SEANTKEVDPLREKTVRRIHKAL 223 (381)
Q Consensus 145 ~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~ 223 (381)
|.||||+|+..|..++++.+++.... .....+..+.+|++.+...........+. .+++.+.....+..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPS-LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGG-GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcc-ccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 57999999999999999999988552 33446778899988876643332222222 23233333324789999999999
Q ss_pred hcCCHHHHHHHHhCC---CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q 045501 224 DTDDFELLTLLLDVS---NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTL 297 (381)
Q Consensus 224 ~~~~~~~v~~Ll~~g---~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~L 297 (381)
..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKW-FEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCC-HhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999987 33 4779999999999976 7888999999999999999999999999999999999999
Q ss_pred HhCC-CCCcccCCCCCCHHHHHHHhc-----------CCcChhHHhhcCCCCCch
Q 045501 298 LSKG-ACASETTSDWQTAVAICRRVT-----------RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 298 l~~g-a~~~~~d~~g~tpL~~A~~~~-----------~~~~~~~~~~~g~t~~~~ 340 (381)
+++| ++++.+|..|+||||+|+..+ +|++++..|..|.||+..
T Consensus 160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~ 214 (228)
T 2dzn_A 160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDV 214 (228)
T ss_dssp HTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGG
T ss_pred HhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHH
Confidence 9999 999999999999999999987 377777777778877654
No 24
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=4.5e-29 Score=236.54 Aligned_cols=221 Identities=17% Similarity=0.113 Sum_probs=120.5
Q ss_pred HHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHh
Q 045501 113 LMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKS 192 (381)
Q Consensus 113 ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (381)
.|+.|...+..++++++++.+.+++.. +.+|.||||+|+..|+.++++.+++.++ +++..+..+.+|++.+..-..
T Consensus 50 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~g~t~L~~A~~~g~ 125 (437)
T 1n11_A 50 PLHMAARAGHTEVAKYLLQNKAKVNAK--AKDDQTPLHCAARIGHTNMVKLLLENNA--NPNLATTAGHTPLHIAAREGH 125 (437)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSSCC--CTTSCCHHHHHHHHTCHHHHHHHHHHTC--CTTCCCTTCCCHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCCCHHHHHHHCCCHHHHHHHHhCCC--CCCCCCCCCCcHHHHHHHcCC
Confidence 466677777777777777777777766 6777788888888887777777777755 566666667777665544322
Q ss_pred hhhhhccc-cccCCCC------------------------------CCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC
Q 045501 193 LRVKSNQE-SEANTKE------------------------------VDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV 240 (381)
Q Consensus 193 ~~~~~~~~-~~~~~~~------------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i 240 (381)
......+. .+..... ++..+..|.||||+|+..|+.+++++|++.| ++
T Consensus 126 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 205 (437)
T 1n11_A 126 VETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP 205 (437)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS
T ss_pred HHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 21111111 1111000 1112344445555555555555555555444 22
Q ss_pred ---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHH
Q 045501 241 ---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAI 317 (381)
Q Consensus 241 ---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~ 317 (381)
+..|.||||+|+..|+ .+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++..|..|.||||+
T Consensus 206 ~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~ 284 (437)
T 1n11_A 206 HSPAWNGYTPLHIAAKQNQ-VEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHL 284 (437)
T ss_dssp CCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHH
T ss_pred CCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 2344555555555543 344444445555555555555555555555555555555555555555555555555555
Q ss_pred HHHhc----------CCcChhHHhhcCCCCC
Q 045501 318 CRRVT----------RRKDYLEATKQGQETN 338 (381)
Q Consensus 318 A~~~~----------~~~~~~~~~~~g~t~~ 338 (381)
|+..+ +|++++..+..|.||+
T Consensus 285 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 315 (437)
T 1n11_A 285 VAQEGHVPVADVLIKHGVMVDATTRMGYTPL 315 (437)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCSSCCCHH
T ss_pred HHHcCCHHHHHHHHhCCccCCCCCCCCCCHH
Confidence 55554 2455555555555553
No 25
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=2.9e-29 Score=205.81 Aligned_cols=154 Identities=21% Similarity=0.168 Sum_probs=133.3
Q ss_pred HHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHh
Q 045501 113 LMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKS 192 (381)
Q Consensus 113 ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (381)
-|..|...+..++++++++.|++++.. +.+|.|||++|+..+..++++.+++.++ +++.
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~--d~~g~t~l~~a~~~~~~~~~~~ll~~ga--d~~~----------------- 65 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNAS--DSDGRTPLHHAAENGHKEVVKLLISKGA--DVNA----------------- 65 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTC--CTTC-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHhccc--chhh-----------------
Confidence 355677788889999999999999988 8999999999999999999998887744 2221
Q ss_pred hhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhccC
Q 045501 193 LRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMDL 268 (381)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~g 268 (381)
+|..|+||||+|+..|+.+++++|++.| ++| ..|+||||+|+..|+ .+++++|+++|
T Consensus 66 ------------------~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~-~~~v~~Ll~~g 126 (169)
T 4gpm_A 66 ------------------KDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH-KEVVKLLISKG 126 (169)
T ss_dssp ------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTT
T ss_pred ------------------hccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcC
Confidence 3788999999999999999999999999 764 789999999999986 78899999999
Q ss_pred CCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcc
Q 045501 269 AGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASE 306 (381)
Q Consensus 269 a~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~ 306 (381)
+|++.+|.+|+||||+|+..|+.+++++|+++||+++.
T Consensus 127 ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 127 ADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999999999999999999974
No 26
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=9.5e-29 Score=215.01 Aligned_cols=200 Identities=17% Similarity=0.036 Sum_probs=164.6
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhh--ccCCCcccccccCcHHHHHHHHhhhhhhccc-cccCCCCCCCCCCCCccH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIA--KSNLDNVCLEKELPDEVSSEIKSLRVKSNQE-SEANTKEVDPLREKTVRR 218 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~ 218 (381)
|++|.||||+|+.+|+.++++.+++... ..+++..+..+.+|++.+...........+. .++++ +..+..|.||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~ 82 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP---MALDRHGQTA 82 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc---cccCCCCCCH
Confidence 7899999999999999999999887432 2367777888999988776533222222211 22222 2247889999
Q ss_pred HHHHHhcCCHHHHHHHHhCC-----CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccC-CCCCcHHHHHHHcC
Q 045501 219 IHKALDTDDFELLTLLLDVS-----NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKD-ARGRTVLHVAARRN 289 (381)
Q Consensus 219 L~~A~~~~~~~~v~~Ll~~g-----~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d-~~g~TpLh~A~~~~ 289 (381)
||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|++.|++++..+ ..|+||||+|+..|
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC-QETVQLLLERGADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCC-HHHHHHHHHcCCCcccccccCCCcHHHHHHHcC
Confidence 99999999999999999987 22 4789999999999976 788999999999999999 88999999999999
Q ss_pred ChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCchhhHHH
Q 045501 290 EPEVMVTLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNKDQLCID 345 (381)
Q Consensus 290 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~~~~~~~ 345 (381)
+.+++++|+++|++++.+|..|.||||+|+..+ +|++++.+|..|.||+.......
T Consensus 162 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 227 (241)
T 1k1a_A 162 SLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRR 227 (241)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcC
Confidence 999999999999999999999999999999988 68999999999999986544433
No 27
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=4.6e-29 Score=215.89 Aligned_cols=188 Identities=14% Similarity=0.046 Sum_probs=158.5
Q ss_pred HHHHHHHcCHHHHHHHHHHH-hhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHH
Q 045501 113 LMYASAAFQMKELVFLLQLW-LRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIK 191 (381)
Q Consensus 113 ll~~A~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (381)
.|+.|...+..++++++++. +.+++.. +.+|.||||+|+.+|+.++++.+++.+.. ....
T Consensus 6 ~L~~A~~~g~~~~v~~Ll~~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~--~~~~--------------- 66 (232)
T 2rfa_A 6 PLLLAAKENDVQALSKLLKFEGCEVHQR--GAMGETALHIAALYDNLEAAMVLMEAAPE--LVFE--------------- 66 (232)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHHCGG--GGGC---------------
T ss_pred HHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCCHHHHHHHHHcCch--hccc---------------
Confidence 47778888888888888887 8888888 78999999999999999999998887542 1100
Q ss_pred hhhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCCC----------------CCchHHHHHHHc
Q 045501 192 SLRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVTL----------------DDAYALHYAAAY 254 (381)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in~----------------~g~t~Lh~A~~~ 254 (381)
..+..+..|.||||+|+..|+.+++++|++.| +++. .|.||||+|+..
T Consensus 67 ---------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 131 (232)
T 2rfa_A 67 ---------------PMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACV 131 (232)
T ss_dssp ---------------CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHH
T ss_pred ---------------cccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHc
Confidence 00114778999999999999999999999999 6642 699999999999
Q ss_pred CChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHH----HHHHhCCCCC------cccCCCCCCHHHHHHHhcCC
Q 045501 255 CNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVM----VTLLSKGACA------SETTSDWQTAVAICRRVTRR 324 (381)
Q Consensus 255 g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v----~~Ll~~ga~~------~~~d~~g~tpL~~A~~~~~~ 324 (381)
|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|+..++.
T Consensus 132 ~~-~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~ 210 (232)
T 2rfa_A 132 GS-EEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNI 210 (232)
T ss_dssp TC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCH
T ss_pred CC-HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCH
Confidence 86 7889999999999999999999999999999999988 9999999998 68999999999999999876
Q ss_pred cChhHHhhcCC
Q 045501 325 KDYLEATKQGQ 335 (381)
Q Consensus 325 ~~~~~~~~~g~ 335 (381)
..+..+.++|.
T Consensus 211 ~~v~~Ll~~g~ 221 (232)
T 2rfa_A 211 VMFQHLMQKRK 221 (232)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhcCc
Confidence 66655555443
No 28
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=3.5e-29 Score=225.08 Aligned_cols=201 Identities=18% Similarity=0.070 Sum_probs=111.8
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHH
Q 045501 110 AIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSE 189 (381)
Q Consensus 110 ~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (381)
....|+.|...+..++++++++.+.+++.. +.+|.||||+|+..|+.++++.+++.++ +++..+..+.+|++.+..
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADINYA--NVDGLTALHQACIDDNVDMVKFLVENGA--NINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCTTCB--CTTCCBHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCcHHHHHHH
Confidence 346788888899999999999999999888 7899999999999999999999999855 455544444444444333
Q ss_pred HHhhhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC--C---------------------------
Q 045501 190 IKSLRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS--N--------------------------- 239 (381)
Q Consensus 190 l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~--------------------------- 239 (381)
.........+. .++++ +..+..|.||||+|+..++.++++.++... +
T Consensus 116 ~g~~~~v~~Ll~~g~~~---~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHV---GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIND 192 (299)
T ss_dssp HTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred cCCHHHHHHHHhCCCCC---CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcch
Confidence 22111111111 11111 112344444444444444444444443221 1
Q ss_pred --CCCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHH
Q 045501 240 --VTLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAI 317 (381)
Q Consensus 240 --in~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~ 317 (381)
.+..|.||||+|+..|+ .+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 193 ~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~ 271 (299)
T 1s70_B 193 VRHAKSGGTALHVAAAKGY-TEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDV 271 (299)
T ss_dssp CCCTTTCCCHHHHHHHHTC-HHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTS
T ss_pred hhhcCCCCCHHHHHHHCCc-HHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 11334444444444443 344444444444444444444444444444444444444444444444444444444444
Q ss_pred H
Q 045501 318 C 318 (381)
Q Consensus 318 A 318 (381)
|
T Consensus 272 A 272 (299)
T 1s70_B 272 A 272 (299)
T ss_dssp C
T ss_pred H
Confidence 4
No 29
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=1.7e-28 Score=212.98 Aligned_cols=216 Identities=16% Similarity=0.072 Sum_probs=178.6
Q ss_pred HHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcc-cccccCcHHHHHHHH
Q 045501 113 LMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNV-CLEKELPDEVSSEIK 191 (381)
Q Consensus 113 ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 191 (381)
.+..|...+..++++++++.+.+++.. +..|.||||+|+..|+.++++.+++.+. ..+.. +..+.+|++.+..-.
T Consensus 12 ~l~~A~~~g~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~--~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 12 DIVKATQYGIYERCRELVEAGYDVRQP--DKENVTLLHWAAINNRIDLVKYYISKGA--IVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp CHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCBTTTTBCHHHHHHHHT
T ss_pred HHHHHHHcCChHHHHHHHHcCCCcCCC--CCCCCCHHHHHHHhCCHHHHHHHHHcCC--cchhhcCCcCCChhHHHHHcC
Confidence 467788899999999999999998888 7899999999999999999999999865 44433 334778877766543
Q ss_pred hhhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhc
Q 045501 192 SLRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNM 266 (381)
Q Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~ 266 (381)
.......+. .++++ +..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+..++.++|++
T Consensus 88 ~~~~v~~Ll~~g~~~---~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~ 164 (240)
T 3eu9_A 88 HLSMVVQLMKYGADP---SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT 164 (240)
T ss_dssp CHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHH
T ss_pred CHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHh
Confidence 322222211 22222 224678999999999999999999999999 65 47899999999988777889999999
Q ss_pred cCCCCcccCC-CCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcCC
Q 045501 267 DLAGLNLKDA-RGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQGQ 335 (381)
Q Consensus 267 ~ga~in~~d~-~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g~ 335 (381)
.|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|++.++...+..+.+.|.
T Consensus 165 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~ 234 (240)
T 3eu9_A 165 FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234 (240)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-
T ss_pred cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhh
Confidence 9999999997 89999999999999999999999999999999999999999999987766666665554
No 30
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=1.5e-29 Score=234.78 Aligned_cols=219 Identities=14% Similarity=0.067 Sum_probs=174.6
Q ss_pred HHHHHHHHcCHHHHH--------HHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCc
Q 045501 112 ELMYASAAFQMKELV--------FLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELP 183 (381)
Q Consensus 112 ~ll~~A~~~~~~~l~--------~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 183 (381)
..|+.|...+..+++ +.+++.+++++.. +.+|.||||+|+.+|+.++++.+++.++ +++..+..+.+|
T Consensus 127 t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~--d~~g~TpL~~A~~~g~~~iv~~Ll~~ga--~~~~~~~~g~t~ 202 (373)
T 2fo1_E 127 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM--DCDENTPLMLAVLARRRRLVAYLMKAGA--DPTIYNKSERSA 202 (373)
T ss_dssp CHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTC--CSCCCCTTCCCH
T ss_pred CHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCC--CCCCCCHHHHHHHcChHHHHHHHHHCCC--CCcccCCCCCCH
Confidence 346666666544433 4445888888888 7899999999999999999999999966 678888889999
Q ss_pred HHHHHHHHhhhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcC---CHHHHHHHHhCC-CCC-----------CCCchH
Q 045501 184 DEVSSEIKSLRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTD---DFELLTLLLDVS-NVT-----------LDDAYA 247 (381)
Q Consensus 184 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~g-~in-----------~~g~t~ 247 (381)
++.+...........+. .+.....++..+..|.||||+|+..+ +.+++++|++.| +++ ..|.||
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~ 282 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTA 282 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCT
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCH
Confidence 88876543222222221 11000112335789999999999998 899999999999 665 379999
Q ss_pred HHHHHHcCChHHHHHHHhcc-CCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcC
Q 045501 248 LHYAAAYCNPKVFKEVLNMD-LAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKD 326 (381)
Q Consensus 248 Lh~A~~~g~~~~~~~lL~~~-ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~ 326 (381)
||+|+..|+ .+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++...
T Consensus 283 Lh~A~~~g~-~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~i 361 (373)
T 2fo1_E 283 LHYAAQVSN-MPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNI 361 (373)
T ss_dssp HHHHHSSCC-HHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHH
T ss_pred HHHHHHhCC-HHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHH
Confidence 999999987 5677777765 49999999999999999999999999999999999999999999999999999988777
Q ss_pred hhHHhhcCC
Q 045501 327 YLEATKQGQ 335 (381)
Q Consensus 327 ~~~~~~~g~ 335 (381)
+..+...|.
T Consensus 362 v~~Ll~~~a 370 (373)
T 2fo1_E 362 VDIFDRCRP 370 (373)
T ss_dssp HHHHHTTC-
T ss_pred HHHHHhcCc
Confidence 776666554
No 31
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=4e-28 Score=209.79 Aligned_cols=193 Identities=13% Similarity=0.023 Sum_probs=161.3
Q ss_pred cCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccc-cccCCCCCCCCCCCCccHHHH
Q 045501 143 ENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQE-SEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 143 ~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~ 221 (381)
..+.+||+.|+..|..+.++.++..... ..+..+..+.+|++.+...........+. .+.+ ++..+..|.||||+
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~ 79 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP---VNDKDDAGWSPLHI 79 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTSCCHHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchh-hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC---CCCcCCCCCCHHHH
Confidence 4567999999999999999998887432 35566778899988776644333222221 2222 22357889999999
Q ss_pred HHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q 045501 222 ALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTL 297 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~L 297 (381)
|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 80 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 80 AASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNR-HEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 65 4789999999999976 7788999999999999999999999999999999999999
Q ss_pred HhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCch
Q 045501 298 LSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 298 l~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~~ 340 (381)
+++|++++.+|..|.||||+|+..+ +|++++..+..|.||+..
T Consensus 159 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 211 (231)
T 3aji_A 159 LFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQV 211 (231)
T ss_dssp HHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHH
T ss_pred HhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 9999999999999999999999988 588888888889988643
No 32
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=3.1e-28 Score=223.52 Aligned_cols=204 Identities=21% Similarity=0.121 Sum_probs=168.1
Q ss_pred HHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHH--
Q 045501 112 ELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSE-- 189 (381)
Q Consensus 112 ~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 189 (381)
..|+.|...+..++++++++++.+++.. +.+|.||||+|+..|+.++++.+++.+. +++..+..+.+|++.+..
T Consensus 60 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~iv~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~ 135 (351)
T 3utm_A 60 TPLHLAAGYNRVRIVQLLLQHGADVHAK--DKGGLVPLHNACSYGHYEVTELLLKHGA--CVNAMDLWQFTPLHEAASKN 135 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCcc--CCCCCcHHHHHHHCCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHcC
Confidence 3578888889999999999999998888 7899999999999999999999999865 677777888888666543
Q ss_pred -------HHhhhhhhcccc-ccCC------------------------------------------CCCCCCCCCCccHH
Q 045501 190 -------IKSLRVKSNQES-EANT------------------------------------------KEVDPLREKTVRRI 219 (381)
Q Consensus 190 -------l~~~~~~~~~~~-~~~~------------------------------------------~~~~~~~~~g~t~L 219 (381)
+++.+....... .+.. ......+..|.|||
T Consensus 136 ~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L 215 (351)
T 3utm_A 136 RVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETAL 215 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHH
T ss_pred CHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHH
Confidence 444333322110 0000 00011357789999
Q ss_pred HHHHhc---CCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChH
Q 045501 220 HKALDT---DDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPE 292 (381)
Q Consensus 220 ~~A~~~---~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~ 292 (381)
|+|+.. +..+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|+++|.+|..|+||||+|+..|+.+
T Consensus 216 ~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~ 294 (351)
T 3utm_A 216 HCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAH-NDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQ 294 (351)
T ss_dssp HHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 999999 5589999999999 66 4789999999999986 68999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCcccCCCCCCHHHHHHH
Q 045501 293 VMVTLLSKGACASETTSDWQTAVAICRR 320 (381)
Q Consensus 293 ~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 320 (381)
++++|+++|++++.+|..|.||+++|..
T Consensus 295 ~v~~Ll~~gad~~~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 295 TCRLLLSYGSDPSIISLQGFTAAQMGNE 322 (351)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHSCH
T ss_pred HHHHHHHcCCCCCCcCCCCCChhhhhhH
Confidence 9999999999999999999999999843
No 33
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=4.4e-29 Score=219.45 Aligned_cols=195 Identities=17% Similarity=0.132 Sum_probs=157.1
Q ss_pred HHHHHHHHcCHH----HHHHHHHHHhhhHHH----HhhhcCchhHHHHHHHc---CcHHHHHHHHHhhhccCCCcccccc
Q 045501 112 ELMYASAAFQMK----ELVFLLQLWLRSMVE----KALVENVIPILVAALHC---QLNQLRSVCIQRIAKSNLDNVCLEK 180 (381)
Q Consensus 112 ~ll~~A~~~~~~----~l~~~l~~~~~~~~~----~~~~~~~~t~L~~A~~~---~~~~l~~~~~~~~~~~~~~~~~~~~ 180 (381)
..|+.|...+.. .+++++++.+.+++. . +.+|.||||+|+.+ |+.++++.+++.++. .+..+.
T Consensus 4 t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~--d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~--~~~~~~-- 77 (256)
T 2etb_A 4 DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTE--GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKD--SGNPKP-- 77 (256)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSB--TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHH--TTCSSC--
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccC--CCCCCCHHHHHHHccccchHHHHHHHHhcCCc--ccchhh--
Confidence 345556666555 477888889998887 6 68999999999999 999999999988663 221110
Q ss_pred cCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---CC-------------
Q 045501 181 ELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---LD------------- 243 (381)
Q Consensus 181 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~~------------- 243 (381)
.++. ...+ .|..|.||||+|+..|+.+++++|++.| +++ ..
T Consensus 78 ---------------~~~~------~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 135 (256)
T 2etb_A 78 ---------------LVNA------QCTD-EFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYF 135 (256)
T ss_dssp ---------------GGGC------CCCS-TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCS
T ss_pred ---------------hccc------cccc-ccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccC
Confidence 0000 0011 3678999999999999999999999999 765 32
Q ss_pred CchHHHHHHHcCChHHHHHHHhc---cCCCCcccCCCCCcHHHHHHH--cCChH-------HHHHHHhCCCCC-------
Q 045501 244 DAYALHYAAAYCNPKVFKEVLNM---DLAGLNLKDARGRTVLHVAAR--RNEPE-------VMVTLLSKGACA------- 304 (381)
Q Consensus 244 g~t~Lh~A~~~g~~~~~~~lL~~---~ga~in~~d~~g~TpLh~A~~--~~~~~-------~v~~Ll~~ga~~------- 304 (381)
|.||||+|+..|+ .+++++|++ +|+++|.+|..|+||||+|+. .++.+ ++++|+++|+++
T Consensus 136 g~tpL~~A~~~~~-~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~ 214 (256)
T 2etb_A 136 GELPLSLAACTKQ-WDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLE 214 (256)
T ss_dssp CSSHHHHHHHTTC-HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGG
T ss_pred CCCHHHHHHHcCC-HHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccc
Confidence 9999999999986 678888888 999999999999999999999 88888 999999999999
Q ss_pred cccCCCCCCHHHHHHHhcCCcChhHHhhcCC
Q 045501 305 SETTSDWQTAVAICRRVTRRKDYLEATKQGQ 335 (381)
Q Consensus 305 ~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g~ 335 (381)
+.+|..|+||||+|+..++...+..+.++|.
T Consensus 215 ~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 215 EISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 9999999999999999877655555554443
No 34
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=7e-28 Score=203.69 Aligned_cols=181 Identities=17% Similarity=0.042 Sum_probs=146.3
Q ss_pred HHHHHHcCHHHHHHHHHHHh-hhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHh
Q 045501 114 MYASAAFQMKELVFLLQLWL-RSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKS 192 (381)
Q Consensus 114 l~~A~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (381)
|+.|...+..+.++.++..+ .+++.. +.+|.||||+|+..|+.++++.+++.++ +++.
T Consensus 9 L~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~----------------- 67 (201)
T 3hra_A 9 LLEAANQRDTKKVKEILQDTTYQVDEV--DTEGNTPLNIAVHNNDIEIAKALIDRGA--DINL----------------- 67 (201)
T ss_dssp HHHHHHTTCHHHHHHHHTCTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTC--CTTC-----------------
T ss_pred HHHHHHhccHHHHHHHHHcCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCC-----------------
Confidence 44444444444444444444 477766 6788888888888888888888887744 2211
Q ss_pred hhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhC-C-CC---CCCCchHHHHHHHcCChHHHHHHHhcc
Q 045501 193 LRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDV-S-NV---TLDDAYALHYAAAYCNPKVFKEVLNMD 267 (381)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ 267 (381)
.+..|.||||+|+..|+.+++++|++. + ++ +..|.||||+|+..|+ .+++++|+++
T Consensus 68 ------------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ 128 (201)
T 3hra_A 68 ------------------QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGH-IDNVKLLLED 128 (201)
T ss_dssp ------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTC-HHHHHHHHHH
T ss_pred ------------------CCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCC-HHHHHHHHHc
Confidence 367899999999999999999999954 4 44 4779999999999986 6788888888
Q ss_pred C-CCCcccCCCCCcHHHHHHHcCC-----hHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcC
Q 045501 268 L-AGLNLKDARGRTVLHVAARRNE-----PEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQG 334 (381)
Q Consensus 268 g-a~in~~d~~g~TpLh~A~~~~~-----~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g 334 (381)
| ++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|.||||+|+..++...+..+.+.|
T Consensus 129 g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 129 GREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 8 9999999999999999999998 99999999999999999999999999999998876666665554
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=3.3e-28 Score=217.34 Aligned_cols=216 Identities=11% Similarity=0.056 Sum_probs=165.2
Q ss_pred cCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhcc
Q 045501 120 FQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQ 199 (381)
Q Consensus 120 ~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 199 (381)
++..++.+++.+. +++.. |.+|.||||+|+..|+.++++.+++.++ +++.. ++.+|++.+...........+
T Consensus 10 ~~~~~v~~lL~~~--~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~--~g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 10 WKSKQLKSFLSSK--DTFKA--DVHGHSASYYAIADNNVRLVCTLLNAGA--LKNLL--ENEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp CCHHHHHHHHHST--TTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTG--GGSCC--TTCCHHHHHTTSSSCHHHHHH
T ss_pred cCHHHHHHHHHhC--CCCcc--CCCCCCHHHHHHHcCCHHHHHHHHhCCC--CCCCC--CCCCHHHHHHHcCCHHHHHHH
Confidence 4556777777665 35555 7899999999999999999999999866 44444 478887766442221111111
Q ss_pred -ccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCC-chHHHHHHHcCChHHHHHHHhccCCCCcc
Q 045501 200 -ESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDD-AYALHYAAAYCNPKVFKEVLNMDLAGLNL 273 (381)
Q Consensus 200 -~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g-~t~Lh~A~~~g~~~~~~~lL~~~ga~in~ 273 (381)
..++++ +..+..|.||||+|+..|+.+++++|++.| ++ +..| .||||+|+..|+ .+++++|+++|+++..
T Consensus 82 l~~ga~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~ 157 (285)
T 3kea_A 82 LFSGLDD---SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND-VSIVSYFLSEIPSTFD 157 (285)
T ss_dssp HHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTC-HHHHHHHHTTSCTTCC
T ss_pred HHCCCCC---CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCC-HHHHHHHHhCCCcccc
Confidence 122222 224788999999999999999999999999 65 4667 799999999986 7899999999988733
Q ss_pred cCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCH-HHHHHHhc----------CCcChhHHhhcCCCCCchhh
Q 045501 274 KDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTA-VAICRRVT----------RRKDYLEATKQGQETNKDQL 342 (381)
Q Consensus 274 ~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tp-L~~A~~~~----------~~~~~~~~~~~g~t~~~~~~ 342 (381)
. ..|+||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..+ +|++++..+. +.++.....
T Consensus 158 ~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-~a~~~~~~~ 235 (285)
T 3kea_A 158 L-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-ENVLLDDAE 235 (285)
T ss_dssp C-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-GGGTTTCHH
T ss_pred c-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-hhhhcCCHH
Confidence 3 289999999999999999999999999999999999998 99999998 5777777775 334455555
Q ss_pred HHHHHHH
Q 045501 343 CIDVLER 349 (381)
Q Consensus 343 ~~~~l~~ 349 (381)
++++|-.
T Consensus 236 iv~~Ll~ 242 (285)
T 3kea_A 236 IAKMIIE 242 (285)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 36
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=1.6e-28 Score=227.19 Aligned_cols=191 Identities=10% Similarity=-0.048 Sum_probs=164.1
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccc-cccCCCCCCCCCCCCccHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQE-SEANTKEVDPLREKTVRRIH 220 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~ 220 (381)
|.+|.||||+|+..|+.++++.+++.+. +++..+..+.+|++.+...........+. .++ ++.+..|.||||
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~g~t~L~ 89 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETGV--SPTIQNRFGCTALHLACKFGCVDTAKYLASVGE-----VHSLWHGQKPIH 89 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC-----CCCCBTTBCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCC--CccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC-----CccccCCCCHHH
Confidence 6889999999999999999999999965 78888889999988877644333222222 222 122458999999
Q ss_pred HHHhcCCHHHHHHHHhC----C-C--------------------CCCCCchHHHHHHHcCC-hHHHHHHHhccCCCCccc
Q 045501 221 KALDTDDFELLTLLLDV----S-N--------------------VTLDDAYALHYAAAYCN-PKVFKEVLNMDLAGLNLK 274 (381)
Q Consensus 221 ~A~~~~~~~~v~~Ll~~----g-~--------------------in~~g~t~Lh~A~~~g~-~~~~~~lL~~~ga~in~~ 274 (381)
+|+..|+.+++++|++. | + .+..|.||||+|+..|. ..+++++|+++|++++.+
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~ 169 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK 169 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCccc
Confidence 99999999999999998 5 3 23479999999999972 478999999999999999
Q ss_pred CCCCCcHHHHHHHcCChHHHHHHHhCCCC-----CcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCc
Q 045501 275 DARGRTVLHVAARRNEPEVMVTLLSKGAC-----ASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNK 339 (381)
Q Consensus 275 d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~-----~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~ 339 (381)
|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..+ +|++++..|..|.||+.
T Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~ 249 (364)
T 3ljn_A 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLY 249 (364)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 99999999999999999999999999999 9999999999999999988 69999999999999964
No 37
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=8.3e-28 Score=201.89 Aligned_cols=151 Identities=19% Similarity=0.134 Sum_probs=134.3
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 221 (381)
+.+|.||||+|+..|..++++.+++.+. +++. .+..|.||||+
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~~~~-----------------------------------~~~~g~t~L~~ 74 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFD--KLED-----------------------------------KDIEGSTALIW 74 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHC--CTTC-----------------------------------CCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhcc--cccc-----------------------------------ccccCccHHHH
Confidence 7899999999999999999998888744 2211 36789999999
Q ss_pred HHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q 045501 222 ALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTL 297 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~L 297 (381)
|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 153 (192)
T 2rfm_A 75 AVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGY-SEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKL 153 (192)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 65 4779999999999976 7789999999999999999999999999999999999999
Q ss_pred HhCCCCCcccCCCCCCHHHHHHHhcCCcChhHH
Q 045501 298 LSKGACASETTSDWQTAVAICRRVTRRKDYLEA 330 (381)
Q Consensus 298 l~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~ 330 (381)
+++|++++.+|..|.||||+|+..++...+..+
T Consensus 154 l~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~L 186 (192)
T 2rfm_A 154 LELGADISARDLTGLTAEASARIFGRQEVIKIF 186 (192)
T ss_dssp HHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHH
Confidence 999999999999999999999998765444433
No 38
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=1.2e-28 Score=213.97 Aligned_cols=190 Identities=15% Similarity=0.108 Sum_probs=150.3
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhcc--CCCcccccccCcHHHHHHHHhhhhhhccc-cccCCCCCCCCCCCCccH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKS--NLDNVCLEKELPDEVSSEIKSLRVKSNQE-SEANTKEVDPLREKTVRR 218 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~ 218 (381)
+.+|.||||+|+.+|..++++.+++..... +++..+..+.+|++.+...........+. .++++ +..+..|.||
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~ 81 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP---ELRDFRGNTP 81 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS---CCCCTTCCCH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCH
Confidence 688999999999999987777776664432 56777888999998887755443333322 33332 3356789999
Q ss_pred HHHHHhcCCHHHHHHHHhCC-C---------CCCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCC-CCCcHHHHHHH
Q 045501 219 IHKALDTDDFELLTLLLDVS-N---------VTLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDA-RGRTVLHVAAR 287 (381)
Q Consensus 219 L~~A~~~~~~~~v~~Ll~~g-~---------in~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~-~g~TpLh~A~~ 287 (381)
||+|+..|+.+++++|++.| + .+..|.||||+|+..|+ .+++++|+++|++++.++. .|+||||+|+.
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY-LGIVELLVSLGADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC-HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999987 3 13679999999999986 7788999999999999998 99999999999
Q ss_pred cCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcCC
Q 045501 288 RNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQGQ 335 (381)
Q Consensus 288 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g~ 335 (381)
.|+.+++++|+++|++++.+|..|.||||+|+..++...+..+...|.
T Consensus 161 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 161 LQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp TTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred cCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 999999999999999999999999999999999885444444444444
No 39
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=5.9e-27 Score=214.33 Aligned_cols=221 Identities=18% Similarity=0.165 Sum_probs=181.6
Q ss_pred HHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHH---
Q 045501 113 LMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSE--- 189 (381)
Q Consensus 113 ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 189 (381)
.|+.|...+..+++++|+++|++++.. +..+.++++.+...+............. +++..+..+.+|++.+..
T Consensus 62 pLh~A~~~g~~~iv~~Ll~~ga~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~t~l~~A~~~~~ 137 (337)
T 4g8k_A 62 PLHNAVQMSREDIVELLLRHGADPVLR--KKNGATPFILAAIAGSVKLLKLFLSKGA--DVNECDFYGFTAFMEAAVYGK 137 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHTTTC--CTTCBCTTCCBHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCchhhh--ccCCCchhHHHHhcccchhhHHhhhccc--hhhhhccCCCCHHHHHHHcCc
Confidence 478889999999999999999999888 7899999999999999998888888754 788888889999776654
Q ss_pred ------HHhhhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHh-CC-CCC---CCCchHHHHHHHcCC--
Q 045501 190 ------IKSLRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLD-VS-NVT---LDDAYALHYAAAYCN-- 256 (381)
Q Consensus 190 ------l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g-~in---~~g~t~Lh~A~~~g~-- 256 (381)
+.+.+..+....... ......+..|.||||+|+..|+.++|++|++ .| ++| ..|.||+|+++..+.
T Consensus 138 ~~~~~~ll~~ga~~~~~~~~~-~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~ 216 (337)
T 4g8k_A 138 VKALKFLYKRGANVNLRRKTK-EDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 216 (337)
T ss_dssp HHHHHHHHHTTCCTTCCCCCC------CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTT
T ss_pred HHHHHHHHHcCCCcchhhccc-cccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcc
Confidence 333333332211100 0112246789999999999999999999996 57 664 779999998877543
Q ss_pred -hHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC-CCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcC
Q 045501 257 -PKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSK-GACASETTSDWQTAVAICRRVTRRKDYLEATKQG 334 (381)
Q Consensus 257 -~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g 334 (381)
...++++|+++|+++|.+|..|+||||+|+..|+.++++.|++. |++++.+|..|+||||+|++.++...+..+.+.|
T Consensus 217 ~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 296 (337)
T 4g8k_A 217 DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 296 (337)
T ss_dssp THHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS
T ss_pred cHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 46788999999999999999999999999999999999999986 8999999999999999999999877788787777
Q ss_pred CCCC
Q 045501 335 QETN 338 (381)
Q Consensus 335 ~t~~ 338 (381)
..++
T Consensus 297 Ad~n 300 (337)
T 4g8k_A 297 ASTD 300 (337)
T ss_dssp CSST
T ss_pred CCCC
Confidence 7664
No 40
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=4.7e-28 Score=214.95 Aligned_cols=198 Identities=18% Similarity=0.145 Sum_probs=143.2
Q ss_pred HHHHHHHHHcCHHHHHHHHHHHhhh----HHHHh--hhcCchhHHHHHHHc---CcHHHHHHHHHhhhccCCCccccccc
Q 045501 111 IELMYASAAFQMKELVFLLQLWLRS----MVEKA--LVENVIPILVAALHC---QLNQLRSVCIQRIAKSNLDNVCLEKE 181 (381)
Q Consensus 111 ~~ll~~A~~~~~~~l~~~l~~~~~~----~~~~~--~~~~~~t~L~~A~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~ 181 (381)
...|+.|...+..++++.+++.+.+ ++... .+..|.||||+|+.+ |+.++++.+++.++. .+..
T Consensus 14 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~--~~~~----- 86 (273)
T 2pnn_A 14 RRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARK--TDSL----- 86 (273)
T ss_dssp HHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHH--TTCH-----
T ss_pred chHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcc--ccch-----
Confidence 3455556666655555555544332 22110 035666777777765 666666666666542 1100
Q ss_pred CcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---C--------------C
Q 045501 182 LPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---L--------------D 243 (381)
Q Consensus 182 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~--------------~ 243 (381)
..+ ++. .. ...|..|.||||+|+..|+.+++++|++.| +++ . .
T Consensus 87 ------~~~------i~~------~~-~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~ 147 (273)
T 2pnn_A 87 ------KQF------VNA------SY-TDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYF 147 (273)
T ss_dssp ------HHH------HTC------CC-CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCS
T ss_pred ------hHH------hhc------cc-ccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccC
Confidence 000 110 00 113678999999999999999999999999 765 3 6
Q ss_pred CchHHHHHHHcCChHHHHHHHhc---cCCCCcccCCCCCcHHHHHHHcCC---------hHHHHHHHhCCCCCc------
Q 045501 244 DAYALHYAAAYCNPKVFKEVLNM---DLAGLNLKDARGRTVLHVAARRNE---------PEVMVTLLSKGACAS------ 305 (381)
Q Consensus 244 g~t~Lh~A~~~g~~~~~~~lL~~---~ga~in~~d~~g~TpLh~A~~~~~---------~~~v~~Ll~~ga~~~------ 305 (381)
|.||||+|+..|+ .+++++|++ .|++++.+|..|+||||+|+..|+ .+++++|+++|++++
T Consensus 148 g~tpL~~A~~~g~-~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~ 226 (273)
T 2pnn_A 148 GELPLSLAACTNQ-LAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLE 226 (273)
T ss_dssp CBSHHHHHHHTTC-HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGG
T ss_pred CCCHHHHHHHcCC-HHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccc
Confidence 9999999999986 678888888 999999999999999999999998 799999999999997
Q ss_pred -ccCCCCCCHHHHHHHhcCCcChhHHhhcCC
Q 045501 306 -ETTSDWQTAVAICRRVTRRKDYLEATKQGQ 335 (381)
Q Consensus 306 -~~d~~g~tpL~~A~~~~~~~~~~~~~~~g~ 335 (381)
.+|..|.||||+|+..++...+..+.+.|.
T Consensus 227 ~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 227 EITNRKGLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cccCCCCCCHHHHHHHhChHHHHHHHHHCCC
Confidence 589999999999999877655555555554
No 41
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=9.9e-28 Score=211.25 Aligned_cols=196 Identities=17% Similarity=0.175 Sum_probs=153.2
Q ss_pred HHHHHHHHcCHHH----HHHHHHHHhhhHHHHhh--hcCchhHHHHHH---HcCcHHHHHHHHHhhhccCCCcccccccC
Q 045501 112 ELMYASAAFQMKE----LVFLLQLWLRSMVEKAL--VENVIPILVAAL---HCQLNQLRSVCIQRIAKSNLDNVCLEKEL 182 (381)
Q Consensus 112 ~ll~~A~~~~~~~----l~~~l~~~~~~~~~~~~--~~~~~t~L~~A~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 182 (381)
..++.|...+..+ +++++.+.+.+++.... +.+|.||||+|+ ..|+.++++.+++.++. .....
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~--~~~~~----- 79 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEK--TGNMR----- 79 (260)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHH--TTCHH-----
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccc--ccchH-----
Confidence 3455555555444 56666678888876621 267999999999 67999999999998663 11110
Q ss_pred cHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC-----------------CCC
Q 045501 183 PDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT-----------------LDD 244 (381)
Q Consensus 183 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in-----------------~~g 244 (381)
.+ ... . .+..|..|+||||+|+..|+.+++++|++.| +++ ..|
T Consensus 80 ------~~------~~~------~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g 140 (260)
T 3jxi_A 80 ------EF------INS------P-FRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFG 140 (260)
T ss_dssp ------HH------HTC------C-BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSC
T ss_pred ------hh------hcc------c-ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCC
Confidence 00 000 0 1113678999999999999999999999999 665 359
Q ss_pred chHHHHHHHcCChHHHHHHHhc---cCCCCcccCCCCCcHHHHHHHcCC---------hHHHHHHHhCCCCC-------c
Q 045501 245 AYALHYAAAYCNPKVFKEVLNM---DLAGLNLKDARGRTVLHVAARRNE---------PEVMVTLLSKGACA-------S 305 (381)
Q Consensus 245 ~t~Lh~A~~~g~~~~~~~lL~~---~ga~in~~d~~g~TpLh~A~~~~~---------~~~v~~Ll~~ga~~-------~ 305 (381)
+||||+|+..|+ .+++++|++ .|++++.+|..|+||||+|+..++ .+++++|+++|+++ +
T Consensus 141 ~tpL~~A~~~g~-~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~ 219 (260)
T 3jxi_A 141 ELPLSLAACTNQ-PHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEA 219 (260)
T ss_dssp SSHHHHHHHTTC-HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGG
T ss_pred CCHHHHHHHcCC-HHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhh
Confidence 999999999987 788888888 999999999999999999999888 79999999999999 7
Q ss_pred ccCCCCCCHHHHHHHhcCCcChhHHhhcC
Q 045501 306 ETTSDWQTAVAICRRVTRRKDYLEATKQG 334 (381)
Q Consensus 306 ~~d~~g~tpL~~A~~~~~~~~~~~~~~~g 334 (381)
.+|..|.||||+|+..++...+..+.++|
T Consensus 220 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 220 LLNNDGLSPLMMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 89999999999999987755555554444
No 42
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.2e-26 Score=190.69 Aligned_cols=155 Identities=21% Similarity=0.156 Sum_probs=134.9
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 221 (381)
...+.++|+.|+..|..++++.+++.+. +++. .+..|.||||+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~--~~~~-----------------------------------~~~~g~t~L~~ 53 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGA--DVNA-----------------------------------EDASGWTPLHL 53 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTC--CTTC-----------------------------------CCTTSCCHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCC--CCCC-----------------------------------CCCCCCCHHHH
Confidence 3567799999999999999999998744 2221 36789999999
Q ss_pred HHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q 045501 222 ALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTL 297 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~L 297 (381)
|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 54 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 132 (169)
T 2y1l_E 54 AAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGH-LEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVL 132 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 65 4789999999999986 7899999999999999999999999999999999999999
Q ss_pred HhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcC
Q 045501 298 LSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQG 334 (381)
Q Consensus 298 l~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g 334 (381)
+++|++++.+|..|.|||++|+..++...+..+.+.|
T Consensus 133 l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 133 LKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999999999987765555554443
No 43
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=6.3e-27 Score=191.92 Aligned_cols=148 Identities=15% Similarity=0.028 Sum_probs=131.6
Q ss_pred CchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHH
Q 045501 144 NVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKAL 223 (381)
Q Consensus 144 ~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 223 (381)
.|.||||.|+..|..++++.+++... +++. .+..|.||||+|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~--~~~~-----------------------------------~~~~g~t~L~~A~ 44 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQEN--VINH-----------------------------------TDEEGFTPLMWAA 44 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSS--CTTC-----------------------------------CCTTSCCHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCC--CcCC-----------------------------------CCCCCCCHHHHHH
Confidence 46799999999999999999998743 2221 3778999999999
Q ss_pred hcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHh
Q 045501 224 DTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLS 299 (381)
Q Consensus 224 ~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~ 299 (381)
..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 45 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 45 AHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY-TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC-HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC-HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999 65 4789999999999986 788899999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCCCHHHHHHHhcCCcChhH
Q 045501 300 KGACASETTSDWQTAVAICRRVTRRKDYLE 329 (381)
Q Consensus 300 ~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~ 329 (381)
+|++++.+|..|.||||+|+..++...+..
T Consensus 124 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 153 (167)
T 3v31_A 124 SGADPTIETDSGYNSMDLAVALGYRSVQQV 153 (167)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 999999999999999999999876444433
No 44
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=3.9e-27 Score=194.13 Aligned_cols=146 Identities=16% Similarity=0.074 Sum_probs=128.3
Q ss_pred hhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHhc
Q 045501 146 IPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALDT 225 (381)
Q Consensus 146 ~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 225 (381)
.+|||.|+..|..++++.+++.... . + +..+..|.||||+|+..
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~-~------------------------~-----------~~~~~~g~t~L~~A~~~ 46 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDN-L------------------------V-----------NKPDERGFTPLIWASAF 46 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSG-G------------------------G-----------GCCCTTSCCHHHHHHHT
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcc-c------------------------c-----------cCCCCCCCCHHHHHHHc
Confidence 5789999999999999988876331 0 0 11478899999999999
Q ss_pred CCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCC
Q 045501 226 DDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKG 301 (381)
Q Consensus 226 ~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~g 301 (381)
|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 47 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (172)
T 3v30_A 47 GEIETVRFLLEWGADPHILAKERESALSLASTGGY-TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG 125 (172)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC-HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999 65 4789999999999986 78899999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCCHHHHHHHhcCCcChh
Q 045501 302 ACASETTSDWQTAVAICRRVTRRKDYL 328 (381)
Q Consensus 302 a~~~~~d~~g~tpL~~A~~~~~~~~~~ 328 (381)
++++.+|..|.||||+|+..++...+.
T Consensus 126 a~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 126 ADLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCccccCCCCCCHHHHHHHhCcHHHHH
Confidence 999999999999999999987643333
No 45
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.5e-26 Score=186.77 Aligned_cols=142 Identities=24% Similarity=0.162 Sum_probs=127.7
Q ss_pred chhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHh
Q 045501 145 VIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALD 224 (381)
Q Consensus 145 ~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 224 (381)
..++|+.|+..|..++++.+++.+.. .+ .+..|.||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~--~~------------------------------------~~~~g~t~L~~A~~ 43 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP--FT------------------------------------TDWLGTSPLHLAAQ 43 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC--CC------------------------------------CCTTCCCHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC--CC------------------------------------cCCCCCCHHHHHHH
Confidence 35899999999999999999987441 11 25778999999999
Q ss_pred cCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC
Q 045501 225 TDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSK 300 (381)
Q Consensus 225 ~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ 300 (381)
.|+.+++++|++.| ++ +..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 44 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 122 (153)
T 1awc_B 44 YGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH-ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122 (153)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC-HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh-HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999 65 4779999999999986 7889999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCCHHHHHHHhcCCc
Q 045501 301 GACASETTSDWQTAVAICRRVTRRK 325 (381)
Q Consensus 301 ga~~~~~d~~g~tpL~~A~~~~~~~ 325 (381)
|++++.+|..|.||||+|+..++..
T Consensus 123 ga~~~~~~~~g~t~l~~A~~~~~~~ 147 (153)
T 1awc_B 123 GADVHTQSKFCKTAFDISIDNGNED 147 (153)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCccccCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999986643
No 46
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=5.8e-28 Score=220.01 Aligned_cols=194 Identities=13% Similarity=-0.072 Sum_probs=150.3
Q ss_pred HHHHHHcCHHHHHHHHHHHhhhHHH-HhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHh
Q 045501 114 MYASAAFQMKELVFLLQLWLRSMVE-KALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKS 192 (381)
Q Consensus 114 l~~A~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (381)
.++|..-.+.++++++++.+++++. . +.+|.||||+|+..|+.++++.+++.++ +++..+..+.+|++.+..-..
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~--d~~g~TpLh~Aa~~g~~~~v~~Ll~~Ga--d~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPV--DEHGNTPLHWLTSIANLELVKHLVKHGS--NRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCC--STTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTBCCTTCCCHHHHHHHSSH
T ss_pred hHHHHHhhHHHHHHHHHhcCCCccccc--CCCCCcHHHHHHHcCCHHHHHHHHHcCC--CCCCcCCCCCCHHHHHHHhcc
Confidence 3445555667888889899999988 6 7899999999999999999999999976 788999999999998876311
Q ss_pred ---hhhhhcc-ccccCCCCCCCCCCCCccHHHHHHh----cCCHHHHHHHHhC--------------------C-CC---
Q 045501 193 ---LRVKSNQ-ESEANTKEVDPLREKTVRRIHKALD----TDDFELLTLLLDV--------------------S-NV--- 240 (381)
Q Consensus 193 ---~~~~~~~-~~~~~~~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~--------------------g-~i--- 240 (381)
......+ .... ..++..+..|+||||+|+. .|+.+++++|++. | ++
T Consensus 177 ~~~~~~~~~ll~~~~--~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 254 (327)
T 1sw6_A 177 NYDSGTFEALLDYLY--PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDK 254 (327)
T ss_dssp HHHTTCHHHHHHHHG--GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------
T ss_pred cccHHHHHHHHHhhh--ccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccc
Confidence 0100000 0000 0122357899999999999 8999999999976 6 44
Q ss_pred CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHH
Q 045501 241 TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRR 320 (381)
Q Consensus 241 n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 320 (381)
+..|.||||+|+. +++|+++ ++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|++
T Consensus 255 ~~~g~t~L~~a~~-------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 255 NGERKDSILENLD-------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp -----CHHHHHCS-------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred cccCCChhHHHHH-------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 4789999999974 6667666 799999999999999999999999999999999999999999999999986
Q ss_pred hc
Q 045501 321 VT 322 (381)
Q Consensus 321 ~~ 322 (381)
+|
T Consensus 326 ~g 327 (327)
T 1sw6_A 326 LE 327 (327)
T ss_dssp --
T ss_pred cC
Confidence 53
No 47
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=8.1e-27 Score=201.76 Aligned_cols=158 Identities=20% Similarity=0.098 Sum_probs=135.8
Q ss_pred CchhHHHHHHHcCcHHHHHHHHHh-hhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHH
Q 045501 144 NVIPILVAALHCQLNQLRSVCIQR-IAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKA 222 (381)
Q Consensus 144 ~~~t~L~~A~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 222 (381)
.|.||||+|+..|..++++.+++. +. +++. .|..|+||||+|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~--~~~~-----------------------------------~~~~g~t~L~~A 44 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGC--EVHQ-----------------------------------RGAMGETALHIA 44 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCS--CTTC-----------------------------------CCTTSCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCC--Cccc-----------------------------------CCCCCCCHHHHH
Confidence 478999999999999999988875 22 1111 378899999999
Q ss_pred HhcCCHHHHHHHHhCC-CC--------CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCC-------------CCCc
Q 045501 223 LDTDDFELLTLLLDVS-NV--------TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDA-------------RGRT 280 (381)
Q Consensus 223 ~~~~~~~~v~~Ll~~g-~i--------n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~-------------~g~T 280 (381)
+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.++. .|+|
T Consensus 45 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t 123 (232)
T 2rfa_A 45 ALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQN-VNLVRALLARGASVSARATGSVFHYRPHNLIYYGEH 123 (232)
T ss_dssp HHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSS
T ss_pred HHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCC-HHHHHHHHhCCCCCCcccCCcceeecccccccCCCC
Confidence 9999999999999998 43 3589999999999986 7899999999999999876 7999
Q ss_pred HHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcC--------------CcCh------hHHhhcCCCCCc
Q 045501 281 VLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTR--------------RKDY------LEATKQGQETNK 339 (381)
Q Consensus 281 pLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~--------------~~~~------~~~~~~g~t~~~ 339 (381)
|||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++ |+++ +..|..|.||+.
T Consensus 124 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~ 202 (232)
T 2rfa_A 124 PLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFK 202 (232)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHH
Confidence 9999999999999999999999999999999999999998874 4444 456677777753
No 48
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=4.3e-27 Score=209.05 Aligned_cols=175 Identities=16% Similarity=0.028 Sum_probs=145.7
Q ss_pred HcCHHHHHHHHHHHhhh--HHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhh
Q 045501 119 AFQMKELVFLLQLWLRS--MVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVK 196 (381)
Q Consensus 119 ~~~~~~l~~~l~~~~~~--~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 196 (381)
..+..+.++.+.+.+.+ ++.. |.+|.||||+|+..|+.++++.+++.+.. +++
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~n~~--d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~-~~~---------------------- 139 (276)
T 4hbd_A 85 VRRHLVTFRAMSARLLDYVVNIA--DSNGNTALHYSVSHANFPVVQQLLDSGVC-KVD---------------------- 139 (276)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTSCC-CTT----------------------
T ss_pred HHHHHHHHHHHHHHHHhhcCcCC--CCCCCCHHHHHHHCCCHHHHHHHHHCCCC-cCC----------------------
Confidence 33444555555566555 4445 78999999999999999999999987431 111
Q ss_pred hccccccCCCCCCCCCCCCccHHHHHH-----hcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhcc
Q 045501 197 SNQESEANTKEVDPLREKTVRRIHKAL-----DTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMD 267 (381)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ 267 (381)
..+..|.||||+|+ ..++.+++++|++.| ++ +..|+||||+|+..|+ .+++++|+++
T Consensus 140 -------------~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~-~~~v~~Ll~~ 205 (276)
T 4hbd_A 140 -------------KQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGR-VDVVKALLAC 205 (276)
T ss_dssp -------------CCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTC-HHHHHHHHHT
T ss_pred -------------CCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC-HHHHHHHHhC
Confidence 14788999999999 668999999999999 33 4679999999999986 7899999999
Q ss_pred CCCCcccCCCCCcHHHHHHHcCChHHHHHHHh-CCCCCcccCCCCCCHHHHHHHhcCCcChhHHhh
Q 045501 268 LAGLNLKDARGRTVLHVAARRNEPEVMVTLLS-KGACASETTSDWQTAVAICRRVTRRKDYLEATK 332 (381)
Q Consensus 268 ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~ 332 (381)
|+++|.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++...+..+..
T Consensus 206 gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 271 (276)
T 4hbd_A 206 EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYS 271 (276)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999999999999999999 899999999999999999999877655554443
No 49
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.94 E-value=3.7e-28 Score=225.40 Aligned_cols=217 Identities=13% Similarity=0.116 Sum_probs=167.2
Q ss_pred HHHHHHHcCHHHHHHHHHHHhhhHHHHhhh-cCchhHHHHHHHcCcHHHHHHHH--------HhhhccCCCcccccccCc
Q 045501 113 LMYASAAFQMKELVFLLQLWLRSMVEKALV-ENVIPILVAALHCQLNQLRSVCI--------QRIAKSNLDNVCLEKELP 183 (381)
Q Consensus 113 ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~t~L~~A~~~~~~~l~~~~~--------~~~~~~~~~~~~~~~~~~ 183 (381)
.|+.|...+. ++++++.. .+++.. + ..|.||||+|+..|+.++++.++ +.++ +++..+..+.+|
T Consensus 97 ~L~~Aa~~~~-~~~~~L~~--~~~n~~--d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga--~vn~~d~~g~Tp 169 (373)
T 2fo1_E 97 KLHTEAAGSY-AITEPITR--ESVNII--DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGA--DVNAMDCDENTP 169 (373)
T ss_dssp HHHHHHHSSS-CCCSCCST--TTTTTC--CCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCC--CTTCCCTTSCCH
T ss_pred HHHHHhcCCc-hHHHHhcc--cccccc--CCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCC--CCcCCCCCCCCH
Confidence 3555555543 45544433 234444 4 68999999999999865544443 5544 678888889999
Q ss_pred HHHHHHHHhhhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC----CC---CCCCchHHHHHHHcC
Q 045501 184 DEVSSEIKSLRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS----NV---TLDDAYALHYAAAYC 255 (381)
Q Consensus 184 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~i---n~~g~t~Lh~A~~~g 255 (381)
++.+...........+. .+++++ ..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|
T Consensus 170 L~~A~~~g~~~iv~~Ll~~ga~~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~ 246 (373)
T 2fo1_E 170 LMLAVLARRRRLVAYLMKAGADPT---IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNE 246 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSC---CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSC
T ss_pred HHHHHHcChHHHHHHHHHCCCCCc---ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhC
Confidence 88876654333222222 333332 34678999999999999999999999986 43 588999999999987
Q ss_pred C--hHHHHHHHhccCCCCcc--------cCCCCCcHHHHHHHcCChHHHHHHHhCC-CCCcccCCCCCCHHHHHHHhc--
Q 045501 256 N--PKVFKEVLNMDLAGLNL--------KDARGRTVLHVAARRNEPEVMVTLLSKG-ACASETTSDWQTAVAICRRVT-- 322 (381)
Q Consensus 256 ~--~~~~~~lL~~~ga~in~--------~d~~g~TpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~-- 322 (381)
+ ..+++++|+++|++++. .|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..+
T Consensus 247 ~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~ 326 (373)
T 2fo1_E 247 GRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI 326 (373)
T ss_dssp STTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCH
Confidence 4 68899999999999986 6778999999999999999999999885 999999999999999999998
Q ss_pred --------CCcChhHHhhcCCCCCc
Q 045501 323 --------RRKDYLEATKQGQETNK 339 (381)
Q Consensus 323 --------~~~~~~~~~~~g~t~~~ 339 (381)
+|++++..|..|.||+.
T Consensus 327 ~iv~~Ll~~gad~~~~d~~g~t~l~ 351 (373)
T 2fo1_E 327 EVVMYLIQQGASVEAVDATDHTARQ 351 (373)
T ss_dssp HHHHHHHHTTCCSSCCCSSSCCHHH
T ss_pred HHHHHHHHcCCCccCCCCCCCCHHH
Confidence 58888888888888754
No 50
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=9.4e-27 Score=207.90 Aligned_cols=184 Identities=13% Similarity=0.035 Sum_probs=146.7
Q ss_pred HHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHH
Q 045501 112 ELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIK 191 (381)
Q Consensus 112 ~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (381)
..|+.|...+..++++++++++.+++.. +.+|.||||+|+..|..++++.+++.+. +++. +..+.+|++.+....
T Consensus 94 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~-~~~g~t~L~~A~~~g 168 (285)
T 3d9h_A 94 SPLHEACLGGHLSCVKILLKHGAQVNGV--TADWHTPLFNACVSGSWDCVNLLLQHGA--SVQP-ESDLASPIHEAARRG 168 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSSCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTC--CSSC-SCTTSCHHHHHHHHT
T ss_pred CHHHHHHHCCcHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCHHHHHHHHHHCCC--CCCC-CCCCCCHHHHHHHcC
Confidence 4578888999999999999999999888 7899999999999999999999999866 3433 234788877766543
Q ss_pred hhhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC--CCCCchHHHHHHHcCChHHHHHHHhcc
Q 045501 192 SLRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV--TLDDAYALHYAAAYCNPKVFKEVLNMD 267 (381)
Q Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i--n~~g~t~Lh~A~~~g~~~~~~~lL~~~ 267 (381)
.......+. .+++ ++..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++
T Consensus 169 ~~~~v~~Ll~~g~~---~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ 244 (285)
T 3d9h_A 169 HVECVNSLIAYGGN---IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTAS-EELACLLMDF 244 (285)
T ss_dssp CHHHHHHHHHTTCC---TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTC-HHHHHHHHHT
T ss_pred CHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHC
Confidence 222222111 2222 2234788999999999999999999999999 65 4789999999999986 7889999999
Q ss_pred CCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC-CCCCcc
Q 045501 268 LAGLNLKDARGRTVLHVAARRNEPEVMVTLLSK-GACASE 306 (381)
Q Consensus 268 ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~-ga~~~~ 306 (381)
|++++.+|..|+||||+|+ ++.+++++|+++ |+++..
T Consensus 245 gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 245 GADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLPK 282 (285)
T ss_dssp TCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC------
T ss_pred CCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCC
Confidence 9999999999999999999 567999999998 888754
No 51
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=1.6e-26 Score=188.37 Aligned_cols=154 Identities=19% Similarity=0.060 Sum_probs=133.9
Q ss_pred cCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHH
Q 045501 143 ENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKA 222 (381)
Q Consensus 143 ~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 222 (381)
+...++|+.|+..|..++++.+++.+. +++. .+..|.||||+|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~--~~~~-----------------------------------~~~~g~t~L~~A 45 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNV--NVNA-----------------------------------QNGFGRTALQVM 45 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCC--CTTC-----------------------------------CCTTSCCHHHHC
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCC--Cccc-----------------------------------cCccCccHHHHH
Confidence 556799999999999999999887633 2211 367899999999
Q ss_pred HhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHH
Q 045501 223 LDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLL 298 (381)
Q Consensus 223 ~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll 298 (381)
+. |+.+++++|++.| +++ ..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 46 ~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 123 (162)
T 1ihb_A 46 KL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF-LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 123 (162)
T ss_dssp CS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred Hc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99 9999999999999 654 789999999999986 78889999999999999999999999999999999999999
Q ss_pred hCCCC-CcccCCCCCCHHHHHHHhcCCcChhHHhhcCC
Q 045501 299 SKGAC-ASETTSDWQTAVAICRRVTRRKDYLEATKQGQ 335 (381)
Q Consensus 299 ~~ga~-~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g~ 335 (381)
++|++ ++.+|..|.||||+|+..++...+..+.+.|.
T Consensus 124 ~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 124 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred HccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 99998 59999999999999999988777776666663
No 52
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=4.4e-27 Score=210.00 Aligned_cols=198 Identities=9% Similarity=-0.090 Sum_probs=164.5
Q ss_pred HHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHH--
Q 045501 112 ELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSE-- 189 (381)
Q Consensus 112 ~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 189 (381)
..|+.|...+..++++++++.+++++.. +|.||||+|+..|+.++++.+++.++ +++..+..+.+|++.+..
T Consensus 33 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~d~~g~t~L~~A~~~g 106 (285)
T 3kea_A 33 SASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGL--DDSQFDDKGNTALYYAVDSG 106 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCcHHHHHHHcC
Confidence 4588899999999999999999988665 48999999999999999999999966 688888889999777654
Q ss_pred -------HHhhhhhhccccccCCCCCCCCCCCC-ccHHHHHHhcCCHHHHHHHHhCC-CC-CC-CCchHHHHHHHcCChH
Q 045501 190 -------IKSLRVKSNQESEANTKEVDPLREKT-VRRIHKALDTDDFELLTLLLDVS-NV-TL-DDAYALHYAAAYCNPK 258 (381)
Q Consensus 190 -------l~~~~~~~~~~~~~~~~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~g-~i-n~-~g~t~Lh~A~~~g~~~ 258 (381)
+++.+..+.. .+..| .||||+|+..|+.+++++|++.| ++ +. .|.||||+|+..|+ .
T Consensus 107 ~~~~v~~Ll~~ga~~~~-----------~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~-~ 174 (285)
T 3kea_A 107 NMQTVKLFVKKNWRLMF-----------YGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGH-V 174 (285)
T ss_dssp CHHHHHHHHHHCGGGGG-----------CSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTC-H
T ss_pred CHHHHHHHHhcCCCCCc-----------cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcCh-H
Confidence 4444433332 36777 79999999999999999999999 54 33 89999999999986 7
Q ss_pred HHHHHHhccCCCCcccCCCCCcH-HHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcC
Q 045501 259 VFKEVLNMDLAGLNLKDARGRTV-LHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQG 334 (381)
Q Consensus 259 ~~~~lL~~~ga~in~~d~~g~Tp-Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g 334 (381)
+++++|+++|++++.+|..|+|| ||+|+..|+.+++++|+++|++++.+|. .|+..++...+..+...|
T Consensus 175 ~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g 244 (285)
T 3kea_A 175 DMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKH 244 (285)
T ss_dssp HHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcC
Confidence 89999999999999999999998 9999999999999999999999999884 334444444444444433
No 53
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=1.7e-26 Score=191.65 Aligned_cols=159 Identities=18% Similarity=0.145 Sum_probs=134.7
Q ss_pred cCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHH
Q 045501 143 ENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKA 222 (381)
Q Consensus 143 ~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 222 (381)
..+.++|+.|+..|..++++.+++.... +++ ..+..|.||||+|
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~-~~~-----------------------------------~~~~~g~t~L~~A 46 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTEN-DLN-----------------------------------QGDDHGFSPLHWA 46 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTS-CTT-----------------------------------CCCTTSCCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcc-ccc-----------------------------------ccCCCCCCHHHHH
Confidence 4577899999999999999998886321 111 1478899999999
Q ss_pred HhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHH
Q 045501 223 LDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLL 298 (381)
Q Consensus 223 ~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll 298 (381)
+..|+.+++++|++.| +++ ..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 47 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 47 CREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGH-RDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999 654 789999999999986 78999999999999999999999999999999999999999
Q ss_pred hCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcCCCCC
Q 045501 299 SKGACASETTSDWQTAVAICRRVTRRKDYLEATKQGQETN 338 (381)
Q Consensus 299 ~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g~t~~ 338 (381)
++|++++.+|..|.|||++|+..++...+..+.+.|..++
T Consensus 126 ~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 126 ANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN 165 (179)
T ss_dssp HTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCS
T ss_pred HCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 9999999999999999999988776656666666665543
No 54
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.9e-26 Score=188.67 Aligned_cols=153 Identities=18% Similarity=0.131 Sum_probs=129.2
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 221 (381)
+..+.++|+.|+..|..++++.+++... .+. +..+..|.||||+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~---~~~---------------------------------~~~~~~g~t~L~~ 48 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQS---VNC---------------------------------RDIEGRQSTPLHF 48 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTT---TTC---------------------------------CCTTTTCCCHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCC---CCc---------------------------------cccccCCCCHHHH
Confidence 5678899999999999999988876421 110 0136778999999
Q ss_pred HHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q 045501 222 ALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTL 297 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~L 297 (381)
|+..|+.+++++|++.| ++ +..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 49 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 127 (165)
T 3twr_A 49 AAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGH-YEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLL 127 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCc-HHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 65 4789999999999986 7789999999999999999999999999999999999999
Q ss_pred HhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhh
Q 045501 298 LSKGACASETTSDWQTAVAICRRVTRRKDYLEATK 332 (381)
Q Consensus 298 l~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~ 332 (381)
+++|++++.+|..|.||||+|.. ++...+..+..
T Consensus 128 l~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 128 LQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp HHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred HHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 99999999999999999999865 44333333333
No 55
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=6.1e-26 Score=196.84 Aligned_cols=193 Identities=12% Similarity=0.025 Sum_probs=154.3
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccc-cccCCCCCCCCCCCCccHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQE-SEANTKEVDPLREKTVRRIH 220 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~ 220 (381)
++.+.++|+.|+..|..++++.+++.+. +++..+..+.+|++.+...........+. .+.+.. ...+..|.||||
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~~~t~L~ 81 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGY--DVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVD--QLGGDLNSTPLH 81 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTTTBCHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCC--CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcch--hhcCCcCCChhH
Confidence 6788899999999999999999999865 67777788888877765533222222211 122211 123456899999
Q ss_pred HHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCC-hHHHH
Q 045501 221 KALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNE-PEVMV 295 (381)
Q Consensus 221 ~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~-~~~v~ 295 (381)
+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..++ .++++
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~-~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 160 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGH-TSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTR 160 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCH-HHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHH
Confidence 999999999999999998 55 4778999999999976 678888889999999999999999999997766 78999
Q ss_pred HHHhCCCCCcccCC-CCCCHHHHHHHhc----------CCcChhHHhhcCCCCCc
Q 045501 296 TLLSKGACASETTS-DWQTAVAICRRVT----------RRKDYLEATKQGQETNK 339 (381)
Q Consensus 296 ~Ll~~ga~~~~~d~-~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~ 339 (381)
+|++.|++++..+. .|.||||+|+..+ +|++++..+..|.||+.
T Consensus 161 ~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 215 (240)
T 3eu9_A 161 LLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALD 215 (240)
T ss_dssp HHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHH
T ss_pred HHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 99999999999887 8999999999988 47777777777777753
No 56
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.4e-25 Score=181.62 Aligned_cols=145 Identities=15% Similarity=0.026 Sum_probs=127.6
Q ss_pred chhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHh
Q 045501 145 VIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALD 224 (381)
Q Consensus 145 ~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 224 (381)
+.++|+.|+..|..++++.+++. ...+++. .+..|.||||+ +.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~-----------------------------------~~~~g~t~L~~-~~ 44 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDA-----------------------------------LNRFGKTALQV-MM 44 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTC-----------------------------------CCTTSCCHHHH-SC
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCccc-----------------------------------cCCCCCcHHHH-HH
Confidence 45899999999999999999887 3112221 36789999999 99
Q ss_pred cCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC
Q 045501 225 TDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSK 300 (381)
Q Consensus 225 ~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ 300 (381)
.|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 45 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 45 FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF-LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc-HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 99999999999999 65 4789999999999986 7888999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCCHHHHHHHhcCCcChh
Q 045501 301 GACASETTSDWQTAVAICRRVTRRKDYL 328 (381)
Q Consensus 301 ga~~~~~d~~g~tpL~~A~~~~~~~~~~ 328 (381)
++++.+|..|.||||+|+..++...+.
T Consensus 124 -~~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 124 -SDLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp -SCTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred -cCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 999999999999999999987644443
No 57
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=1.2e-25 Score=189.98 Aligned_cols=161 Identities=16% Similarity=0.113 Sum_probs=136.6
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 221 (381)
.+.+.+||+.|+..|..+.++.++..... +++ ..+..|.||||+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~-~~~-----------------------------------~~~~~g~t~L~~ 45 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTY-QVD-----------------------------------EVDTEGNTPLNI 45 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTC-CTT-----------------------------------CCCTTSCCHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCC-CCC-----------------------------------CCCCCCCCHHHH
Confidence 46788999999999999988888865320 111 136789999999
Q ss_pred HHhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHh-ccCCCCcccCCCCCcHHHHHHHcCChHHHHH
Q 045501 222 ALDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLN-MDLAGLNLKDARGRTVLHVAARRNEPEVMVT 296 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~-~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~ 296 (381)
|+..|+.+++++|++.| +++ ..|.||||+|+..|+ .+++++|+ ..+++++.+|..|+||||+|+..|+.+++++
T Consensus 46 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~-~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 124 (201)
T 3hra_A 46 AVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGR-TEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKL 124 (201)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHH
Confidence 99999999999999999 664 779999999999987 55666666 7788999999999999999999999999999
Q ss_pred HHhCC-CCCcccCCCCCCHHHHHHHhc---------------CCcChhHHhhcCCCCCc
Q 045501 297 LLSKG-ACASETTSDWQTAVAICRRVT---------------RRKDYLEATKQGQETNK 339 (381)
Q Consensus 297 Ll~~g-a~~~~~d~~g~tpL~~A~~~~---------------~~~~~~~~~~~g~t~~~ 339 (381)
|+++| ++++.+|..|.||||+|+..+ +|++++..|..|.||+.
T Consensus 125 Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 183 (201)
T 3hra_A 125 LLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMD 183 (201)
T ss_dssp HHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHH
Confidence 99999 999999999999999999765 46777777777777753
No 58
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=2.1e-26 Score=202.32 Aligned_cols=144 Identities=17% Similarity=0.053 Sum_probs=121.5
Q ss_pred CchhHHHHHHHcCcHHHH----HHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHH
Q 045501 144 NVIPILVAALHCQLNQLR----SVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRI 219 (381)
Q Consensus 144 ~~~t~L~~A~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 219 (381)
.|.||||.|+..|..+.+ +.+++.+. +++... . ..|..|+|||
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~--~i~~~~---------------------~----------~~d~~g~t~L 47 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSK--YLTDSA---------------------Y----------TEGSTGKTCL 47 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTC--CTTSGG---------------------G----------SBTTTTBCHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCC--Cccccc---------------------c----------cCCCCCCCHH
Confidence 378999999999997644 44444422 121100 0 0378999999
Q ss_pred HHHHhc---CCHHHHHHHHhCC-CCC--------------CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCC----
Q 045501 220 HKALDT---DDFELLTLLLDVS-NVT--------------LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDAR---- 277 (381)
Q Consensus 220 ~~A~~~---~~~~~v~~Ll~~g-~in--------------~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~---- 277 (381)
|+|+.. |+.+++++|++.| +++ ..|.||||+|+..|+ .+++++|+++|++++.+|..
T Consensus 48 ~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~ga~~~~~~~~~~~~ 126 (256)
T 2etb_A 48 MKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRS-LQCVKLLVENGADVHLRACGRFFQ 126 (256)
T ss_dssp HHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCCSGGGS
T ss_pred HHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCC-HHHHHHHHHcCCCCCccccccccc
Confidence 999999 9999999999998 432 569999999999986 78899999999999999986
Q ss_pred ---------CCcHHHHHHHcCChHHHHHHHh---CCCCCcccCCCCCCHHHHHHHh
Q 045501 278 ---------GRTVLHVAARRNEPEVMVTLLS---KGACASETTSDWQTAVAICRRV 321 (381)
Q Consensus 278 ---------g~TpLh~A~~~~~~~~v~~Ll~---~ga~~~~~d~~g~tpL~~A~~~ 321 (381)
|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..
T Consensus 127 ~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~ 182 (256)
T 2etb_A 127 KHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMI 182 (256)
T ss_dssp CCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHc
Confidence 9999999999999999999999 9999999999999999999984
No 59
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=1.9e-26 Score=207.18 Aligned_cols=182 Identities=18% Similarity=0.139 Sum_probs=144.8
Q ss_pred HHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHH
Q 045501 112 ELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIK 191 (381)
Q Consensus 112 ~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (381)
..|+.|...+..++++++++++++++.. +..|.||||+|+..|+.++++.+++.++ +++..+..+.+|++.+....
T Consensus 75 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~tpL~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~l~~A~~~~ 150 (299)
T 1s70_B 75 TALHQACIDDNVDMVKFLVENGANINQP--DNEGWIPLHAAASCGYLDIAEYLISQGA--HVGAVNSEGDTPLDIAEEEA 150 (299)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHCCSHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHhCCC--CCCCcCCCCCCHHHHHHhcc
Confidence 4578888999999999999999999888 7899999999999999999999999966 67888888999977653321
Q ss_pred h----------hhhhhcccc----------------ccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---
Q 045501 192 S----------LRVKSNQES----------------EANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT--- 241 (381)
Q Consensus 192 ~----------~~~~~~~~~----------------~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in--- 241 (381)
. .+....... .+... ....+..|.||||+|+..|+.+++++|++.| +++
T Consensus 151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d 229 (299)
T 1s70_B 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIN-DVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD 229 (299)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCC-CCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC
T ss_pred hHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcc-hhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcC
Confidence 1 111111100 00000 1124678999999999999999999999999 664
Q ss_pred CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhC
Q 045501 242 LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSK 300 (381)
Q Consensus 242 ~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ 300 (381)
..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+. +..+.++.+++.
T Consensus 230 ~~g~tpL~~A~~~~~-~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~-~~~~~l~~l~~~ 286 (299)
T 1s70_B 230 YDGWTPLHAAAHWGK-EEACRILVENLCDMEAVNKVGQTAFDVADE-DILGYLEELQKK 286 (299)
T ss_dssp TTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCTTTSCCS-GGGHHHHHHHHH
T ss_pred CCCCcHHHHHHhcCC-HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-HHHHHHHHHHHH
Confidence 789999999999986 789999999999999999999999999976 455666666654
No 60
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=6.1e-25 Score=188.66 Aligned_cols=187 Identities=16% Similarity=0.094 Sum_probs=157.3
Q ss_pred HHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHH
Q 045501 112 ELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIK 191 (381)
Q Consensus 112 ~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (381)
..|+.|...+..++++++++.+.+++.. +.+|.||||+|+..++.++++.+++.... .++..+..+.+|++.+....
T Consensus 27 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~g~t~L~~A~~~~ 103 (223)
T 2f8y_A 27 TALHLAARYSRSDAAKRLLEASADANIQ--DNMGRTPLHAAVSADAQGVFQILIRNRAT-DLDARMHDGTTPLILAARLA 103 (223)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHBTTS-CTTCCCTTCCCHHHHHHHHT
T ss_pred chHHHHHHcCCHHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCcHHHHHHHhC
Confidence 4688889999999999999999999888 78999999999999999999999987542 56677788889988776543
Q ss_pred hhhhhhccc-cccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhc
Q 045501 192 SLRVKSNQE-SEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNM 266 (381)
Q Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~ 266 (381)
.......+. .+.+ ++..+..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|+..|+ .+++++|++
T Consensus 104 ~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~ 179 (223)
T 2f8y_A 104 VEGMLEDLINSHAD---VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS-YETAKVLLD 179 (223)
T ss_dssp CHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC-HHHHHHHHH
T ss_pred cHHHHHHHHHcCCC---CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCC-HHHHHHHHH
Confidence 322222211 2222 2234788999999999999999999999999 654 789999999999976 788999999
Q ss_pred cCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCc
Q 045501 267 DLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACAS 305 (381)
Q Consensus 267 ~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~ 305 (381)
+|++++.+|..|+||||+|+..|+.+++++|+++|+...
T Consensus 180 ~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 180 HFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred cCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 999999999999999999999999999999999999754
No 61
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=9.2e-26 Score=189.36 Aligned_cols=128 Identities=16% Similarity=0.097 Sum_probs=118.4
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHH
Q 045501 211 LREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAA 286 (381)
Q Consensus 211 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~ 286 (381)
.|..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNR-LGIAEKLLSKGSNVNTKDFSGKTPLMWSI 109 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCC-HHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 5889999999999999999999999998 55 4779999999999986 78889999999999999999999999999
Q ss_pred HcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCc
Q 045501 287 RRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNK 339 (381)
Q Consensus 287 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~ 339 (381)
..|+.+++++|+++|++++.+|..|.||||+|+..+ +|++++..|..|.||+.
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 172 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEA 172 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 999999999999999999999999999999999988 57888888888888753
No 62
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=1.5e-25 Score=184.67 Aligned_cols=161 Identities=14% Similarity=-0.023 Sum_probs=135.2
Q ss_pred HHHHHHcCHHHHHHHHHHHhhh-HHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHh
Q 045501 114 MYASAAFQMKELVFLLQLWLRS-MVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKS 192 (381)
Q Consensus 114 l~~A~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (381)
|+.|...+..++++.+++.+.. ++.. +.+|.||||+|+..|+.++++.+++.+. +++.
T Consensus 6 L~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~----------------- 64 (172)
T 3v30_A 6 IHQLAAQGELDQLKEHLRKGDNLVNKP--DERGFTPLIWASAFGEIETVRFLLEWGA--DPHI----------------- 64 (172)
T ss_dssp HHHHHHTTCHHHHHHHHTTCSGGGGCC--CTTSCCHHHHHHHTTCHHHHHHHHHHTC--CTTC-----------------
T ss_pred HHHHHHcCCHHHHHHHHHcCcccccCC--CCCCCCHHHHHHHcCCHHHHHHHHHcCC--Cchh-----------------
Confidence 5566677777778788877766 5555 7899999999999999999999998754 2221
Q ss_pred hhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhccC
Q 045501 193 LRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMDL 268 (381)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~g 268 (381)
.+..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|+..|+ .+++++|+++|
T Consensus 65 ------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g 125 (172)
T 3v30_A 65 ------------------LAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNH-VKCVEALLARG 125 (172)
T ss_dssp ------------------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTT
T ss_pred ------------------hcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcC
Confidence 3678999999999999999999999999 654 789999999999976 78889999999
Q ss_pred CCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCH
Q 045501 269 AGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTA 314 (381)
Q Consensus 269 a~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tp 314 (381)
++++.+|..|+||||+|+..|+.+++++|+++|+++..++..|.||
T Consensus 126 a~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 126 ADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred CCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999999999999999999999999999999999999999887
No 63
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=3.7e-27 Score=204.52 Aligned_cols=203 Identities=12% Similarity=0.018 Sum_probs=156.8
Q ss_pred HHHHHHHcCHHHHHHHHHHHhh----hHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHH
Q 045501 113 LMYASAAFQMKELVFLLQLWLR----SMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSS 188 (381)
Q Consensus 113 ll~~A~~~~~~~l~~~l~~~~~----~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (381)
.|+.|...+..++++++++.+. +++.. +..|.||||+|+..|+.++++.+++.++ +++..+..+.+|++.+.
T Consensus 11 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~ 86 (236)
T 1ikn_D 11 FLHLAIIHEEKALTMEVIRQVKGDLAFLNFQ--NNLQQTPLHLAVITNQPEIAEALLGAGC--DPELRDFRGNTPLHLAC 86 (236)
T ss_dssp TTHHHHHTTCSSSSSCCCC-----CCCCCCC--CTTCCCHHHHHHHTTCHHHHHCCCSCCC--CSCCCCTTCCCHHHHHH
T ss_pred hhHHHHHcCChhHHHHHHHHhhccHHHhhcc--CCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCCcCCCCCCHHHHHH
Confidence 3566667766666666655554 45555 6788899999999999888888888755 67777788888887776
Q ss_pred HHHhhhhhhccc-cccCC---CCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---C-CCchHHHHHHHcCChHH
Q 045501 189 EIKSLRVKSNQE-SEANT---KEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---L-DDAYALHYAAAYCNPKV 259 (381)
Q Consensus 189 ~l~~~~~~~~~~-~~~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~-~g~t~Lh~A~~~g~~~~ 259 (381)
..........+. .++.. ...+..+..|.||||+|+..|+.+++++|++.| +++ . .|.||||+|+..|+ .+
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~-~~ 165 (236)
T 1ikn_D 87 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN-PD 165 (236)
T ss_dssp HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC-HH
T ss_pred HcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC-HH
Confidence 543322222221 12111 113345788999999999999999999999999 664 4 89999999999986 78
Q ss_pred HHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCc--ccCCCCCCHHHHHHH
Q 045501 260 FKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACAS--ETTSDWQTAVAICRR 320 (381)
Q Consensus 260 ~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~--~~d~~g~tpL~~A~~ 320 (381)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.. ..+..|.||.+.+..
T Consensus 166 ~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 166 LVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp HHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred HHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 9999999999999999999999999999999999999999999876 888899998776543
No 64
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=5.2e-26 Score=200.23 Aligned_cols=166 Identities=18% Similarity=0.109 Sum_probs=133.9
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhcc--CCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKS--NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRI 219 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 219 (381)
+..+.++||.|+..|..+.++.+++..... +++..+. ..+..|.|||
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~-------------------------------~~~~~g~t~L 50 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEF-------------------------------REPSTGKTCL 50 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGG-------------------------------SCTTTCCCHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhh-------------------------------hccCCCCcHH
Confidence 356789999999999977555555432111 1221110 0257899999
Q ss_pred HHHH---hcCCHHHHHHHHhCC-CC--------------CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccC------
Q 045501 220 HKAL---DTDDFELLTLLLDVS-NV--------------TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKD------ 275 (381)
Q Consensus 220 ~~A~---~~~~~~~v~~Ll~~g-~i--------------n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d------ 275 (381)
|+|+ ..|+.+++++|++.| +. +..|+||||+|+..|+ .+++++|+++|++++.++
T Consensus 51 ~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~ga~~~~~~~~~~~~ 129 (260)
T 3jxi_A 51 PKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRC-KHYVELLVEKGADVHAQARGRFFQ 129 (260)
T ss_dssp HHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCEECCCS
T ss_pred HHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCC-HHHHHHHHhCCCCcCccccccccC
Confidence 9999 779999999999987 32 1389999999999987 789999999999999999
Q ss_pred --------CCCCcHHHHHHHcCChHHHHHHHh---CCCCCcccCCCCCCHHHHHHHhcC-------------------Cc
Q 045501 276 --------ARGRTVLHVAARRNEPEVMVTLLS---KGACASETTSDWQTAVAICRRVTR-------------------RK 325 (381)
Q Consensus 276 --------~~g~TpLh~A~~~~~~~~v~~Ll~---~ga~~~~~d~~g~tpL~~A~~~~~-------------------~~ 325 (381)
..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++ |+
T Consensus 130 ~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga 209 (260)
T 3jxi_A 130 PKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCA 209 (260)
T ss_dssp SSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCc
Confidence 689999999999999999999999 999999999999999999996543 55
Q ss_pred Ch-------hHHhhcCCCCCc
Q 045501 326 DY-------LEATKQGQETNK 339 (381)
Q Consensus 326 ~~-------~~~~~~g~t~~~ 339 (381)
++ +..|..|.||+.
T Consensus 210 ~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 210 KLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp HHCTTCCGGGCCCTTSCCHHH
T ss_pred ccccccchhhcccCCCCCHHH
Confidence 55 567788888863
No 65
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=2.3e-27 Score=216.08 Aligned_cols=207 Identities=17% Similarity=0.084 Sum_probs=145.4
Q ss_pred HHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCccc--c----------cccCc-----HHH
Q 045501 124 ELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVC--L----------EKELP-----DEV 186 (381)
Q Consensus 124 ~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~--~----------~~~~~-----~~~ 186 (381)
++++++++.|++++.. +.+|.++++ |+.++++.+++.+......... . .+.+. ...
T Consensus 33 dlv~~ll~~ga~i~~~--~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~ 105 (327)
T 1sw6_A 33 DLTSDFLSSPLKIMKA--LPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSF 105 (327)
T ss_dssp TCCCSTTTSSCCCEEC--BCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CH
T ss_pred chHHHHhhCCcccccC--CCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHH
Confidence 4567777888888887 788888876 7788888888876532221000 0 00000 011
Q ss_pred HHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCCh--HHH
Q 045501 187 SSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNP--KVF 260 (381)
Q Consensus 187 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~--~~~ 260 (381)
...+.... ......+.+++. +.|..|+||||+|+..|+.++|++|++.| +++ ..|+||||+|+..|+. .++
T Consensus 106 ~~~~~~~~-~~l~~~g~dvn~--~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~ 182 (327)
T 1sw6_A 106 DSLLQEVN-DAFPNTQLNLNI--PVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGT 182 (327)
T ss_dssp HHHHHHHH-HHCTTSCCCSCS--CCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTC
T ss_pred HhhHHHHH-HHHHhcCCCccc--ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHH
Confidence 11111111 111112222222 14789999999999999999999999999 764 7899999999999751 233
Q ss_pred HHHHhccC-CCCcccCCCCCcHHHHHHH----cCChHHHHHHHhCCC---------------------------------
Q 045501 261 KEVLNMDL-AGLNLKDARGRTVLHVAAR----RNEPEVMVTLLSKGA--------------------------------- 302 (381)
Q Consensus 261 ~~lL~~~g-a~in~~d~~g~TpLh~A~~----~~~~~~v~~Ll~~ga--------------------------------- 302 (381)
+..|++.+ ++++.+|..|+||||+|+. .|+.+++++|++.++
T Consensus 183 ~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L 262 (327)
T 1sw6_A 183 FEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSI 262 (327)
T ss_dssp HHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHH
T ss_pred HHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChh
Confidence 44444444 7899999999999999999 899999999998743
Q ss_pred ------------CCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCch
Q 045501 303 ------------CASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 303 ------------~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~~ 340 (381)
+++.+|..|+||||+|+..+ +|++++.+|..|.||+..
T Consensus 263 ~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~ 322 (327)
T 1sw6_A 263 LENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDF 322 (327)
T ss_dssp HHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 57788888999999998887 588888888888888754
No 66
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=6.3e-26 Score=183.83 Aligned_cols=127 Identities=17% Similarity=0.095 Sum_probs=103.4
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCc-HHHHH
Q 045501 211 LREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRT-VLHVA 285 (381)
Q Consensus 211 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~T-pLh~A 285 (381)
.+..|.||||+|+..|+.+++++|++.| ++ +..|+||||+|+ .|+ .+++++|+++|++++.+|..|+| |||+|
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~-~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGS-ARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTC-HHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCC-HHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 4688999999999999999999999999 65 478999999985 655 78999999999999999999999 99999
Q ss_pred HHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCc
Q 045501 286 ARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNK 339 (381)
Q Consensus 286 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~ 339 (381)
+..|+.+++++|+++|++++.+|..|.||||+|+..+ +|++++..+..|.||.+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 9999999999999999999999999999999999988 58888888888888764
No 67
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=6.4e-26 Score=179.38 Aligned_cols=124 Identities=16% Similarity=0.057 Sum_probs=111.2
Q ss_pred CCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCC-CCcHHH
Q 045501 209 DPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDAR-GRTVLH 283 (381)
Q Consensus 209 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~-g~TpLh 283 (381)
+..+..|.||||+|+..|+.+++++|++.| ++ +..|+||||+|+. |+ .+++++|+++|++++.+|.. |+||||
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~-~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 83 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GS-AQVAELLLLHGAEPNCADPATLTRPVH 83 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SC-HHHHHHHHHHTCCSSCCBTTTTBCHHH
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CC-HHHHHHHHHCCCCCCCcCCCCCCCHHH
Confidence 345789999999999999999999999999 65 4789999999999 76 78889999999999999999 999999
Q ss_pred HHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcC
Q 045501 284 VAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQG 334 (381)
Q Consensus 284 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g 334 (381)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..++...+..+.+.|
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 84 DAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999987755555444443
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=3.3e-25 Score=178.90 Aligned_cols=125 Identities=19% Similarity=0.135 Sum_probs=114.9
Q ss_pred CccHHHHHHhcCCHHHHHHHHhCC-CC--CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCCh
Q 045501 215 TVRRIHKALDTDDFELLTLLLDVS-NV--TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEP 291 (381)
Q Consensus 215 g~t~L~~A~~~~~~~~v~~Ll~~g-~i--n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~ 291 (381)
..|+|+.|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGH-FSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTC-HHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 468999999999999999999999 44 5789999999999986 7888999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCch
Q 045501 292 EVMVTLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 292 ~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~~ 340 (381)
+++++|+++|++++.+|..|.||||+|+..+ +|++++..+..|.||+..
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 139 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDI 139 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 9999999999999999999999999999988 588888888888887643
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=4.7e-27 Score=202.78 Aligned_cols=175 Identities=14% Similarity=0.061 Sum_probs=142.3
Q ss_pred HHHHHhhhHHHHh-hhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCC
Q 045501 128 LLQLWLRSMVEKA-LVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTK 206 (381)
Q Consensus 128 ~l~~~~~~~~~~~-~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 206 (381)
.+++.+.+.+... .+.++.||||.|+..|..++++.+++.+. +++.
T Consensus 3 ~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~------------------------------- 49 (229)
T 2vge_A 3 SVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMN--DPSQ------------------------------- 49 (229)
T ss_dssp -------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSS--CTTC-------------------------------
T ss_pred ehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCC--CCCC-------------------------------
Confidence 3445555543221 14678899999999999999999998744 2222
Q ss_pred CCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccC-CCCCcH
Q 045501 207 EVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKD-ARGRTV 281 (381)
Q Consensus 207 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d-~~g~Tp 281 (381)
.|..|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+ .+++++|++.|++++.++ ..|+||
T Consensus 50 ----~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~-~~~v~~Ll~~ga~~~~~~~~~g~tp 124 (229)
T 2vge_A 50 ----PNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCND-TVICMALVQHGAAIFATTLSDGATA 124 (229)
T ss_dssp ----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHTTTCCTTCCCSSTTCCT
T ss_pred ----CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCcccccCCCCCCH
Confidence 3678999999999999999999999999 66 4789999999999986 789999999999999997 599999
Q ss_pred HHHH--HHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc-------CCcC--hhHHhhcCCCCCch
Q 045501 282 LHVA--ARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT-------RRKD--YLEATKQGQETNKD 340 (381)
Q Consensus 282 Lh~A--~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~-------~~~~--~~~~~~~g~t~~~~ 340 (381)
||+| +..|+.+++++|+++|++++.+|..|.||++.++... .|++ ++..|..|.||+..
T Consensus 125 L~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~ 194 (229)
T 2vge_A 125 FEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWW 194 (229)
T ss_dssp GGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEE
T ss_pred HHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCcccHHHH
Confidence 9999 9999999999999999999999999999998654443 4666 77888999999754
No 70
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=4.4e-25 Score=174.53 Aligned_cols=123 Identities=23% Similarity=0.105 Sum_probs=109.9
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHH
Q 045501 211 LREKTVRRIHKALDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAA 286 (381)
Q Consensus 211 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~ 286 (381)
....+.||||+|+..|+.+++++|++.| +++ ..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGH-LEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 3577899999999999999999999999 654 779999999999986 78889999999999999999999999999
Q ss_pred HcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcC
Q 045501 287 RRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQG 334 (381)
Q Consensus 287 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g 334 (381)
..|+.+++++|+++|++++.+|..|.||||+|+..++...+..+.+.|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999987766555554443
No 71
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.92 E-value=7.1e-25 Score=179.26 Aligned_cols=127 Identities=23% Similarity=0.207 Sum_probs=116.0
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHhCC--C---CCCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHH
Q 045501 212 REKTVRRIHKALDTDDFELLTLLLDVS--N---VTLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAA 286 (381)
Q Consensus 212 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~---in~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~ 286 (381)
+..|.|||+.|+..|+.++++.|++.+ + .+..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNR-VSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcCh-HHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 678899999999999999999999966 3 34778999999999986 78889999999999999999999999999
Q ss_pred HcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCc
Q 045501 287 RRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNK 339 (381)
Q Consensus 287 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~ 339 (381)
..|+.+++++|+++|++++.+|..|.||||+|+..+ +|++++..|..|.||+.
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 146 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLD 146 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGG
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhH
Confidence 999999999999999999999999999999999998 57888888888888864
No 72
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.92 E-value=6.9e-25 Score=179.70 Aligned_cols=125 Identities=16% Similarity=0.117 Sum_probs=116.5
Q ss_pred CCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcC
Q 045501 214 KTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRN 289 (381)
Q Consensus 214 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~ 289 (381)
.|.||||.|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQ-IAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCC-HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 5789999999999999999999999 55 4789999999999986 78888999999999999999999999999999
Q ss_pred ChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCc
Q 045501 290 EPEVMVTLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNK 339 (381)
Q Consensus 290 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~ 339 (381)
+.+++++|+++|++++.+|..|.||||+|+..+ +|++++..+..|.||+.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 140 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMD 140 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 999999999999999999999999999999988 68888888899999864
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.92 E-value=4.5e-24 Score=175.25 Aligned_cols=152 Identities=16% Similarity=0.140 Sum_probs=136.3
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHH
Q 045501 110 AIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSE 189 (381)
Q Consensus 110 ~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (381)
....+..|...+..++++++++.+.+++.. +.+|.||||+|+..|..++++.+++.+. +++.
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~-------------- 75 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAE--DASGWTPLHLAAFNGHLEIVEVLLKNGA--DVNA-------------- 75 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTC--CTTC--------------
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCc--------------
Confidence 567788899999999999999999999888 7899999999999999999999998744 2211
Q ss_pred HHhhhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHh
Q 045501 190 IKSLRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLN 265 (381)
Q Consensus 190 l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~ 265 (381)
.+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+
T Consensus 76 ---------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll 133 (169)
T 2y1l_E 76 ---------------------VDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGH-LEIVEVLL 133 (169)
T ss_dssp ---------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHH
T ss_pred ---------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHH
Confidence 3678999999999999999999999999 65 4779999999999976 78999999
Q ss_pred ccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCC
Q 045501 266 MDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKG 301 (381)
Q Consensus 266 ~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~g 301 (381)
++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 134 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 134 KNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999986
No 74
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=1e-24 Score=177.71 Aligned_cols=152 Identities=20% Similarity=0.089 Sum_probs=133.9
Q ss_pred HHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHH
Q 045501 111 IELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEI 190 (381)
Q Consensus 111 ~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 190 (381)
...|+.|...+..++++++++.+.+++.. +..|.||||+|+. |..++++.+++.+. +++.
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~-~~~~~v~~Ll~~g~--~~~~--------------- 65 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVNAQ--NGFGRTALQVMKL-GNPEIARRLLLRGA--NPDL--------------- 65 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTTCC--CTTSCCHHHHCCS-SCHHHHHHHHHTTC--CTTC---------------
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCcccc--CccCccHHHHHHc-CcHHHHHHHHHcCC--CCCC---------------
Confidence 45678888889999999999999999888 7899999999999 99999999988744 2221
Q ss_pred HhhhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhc
Q 045501 191 KSLRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNM 266 (381)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~ 266 (381)
.+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|++
T Consensus 66 --------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~ 124 (162)
T 1ihb_A 66 --------------------KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGH-LRVVEFLVK 124 (162)
T ss_dssp --------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHH
T ss_pred --------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHH
Confidence 3678999999999999999999999999 65 4789999999999976 788899999
Q ss_pred cCCC-CcccCCCCCcHHHHHHHcCChHHHHHHHhCCCC
Q 045501 267 DLAG-LNLKDARGRTVLHVAARRNEPEVMVTLLSKGAC 303 (381)
Q Consensus 267 ~ga~-in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~ 303 (381)
+|++ ++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 125 ~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 125 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred ccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9998 699999999999999999999999999999986
No 75
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=5.5e-25 Score=178.25 Aligned_cols=138 Identities=18% Similarity=0.045 Sum_probs=108.0
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 221 (381)
++.+.||||+|+..|..++++.+++.+. +++. .+..|.||||+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~-----------------------------------~~~~g~t~L~~ 51 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGA--NPNA-----------------------------------PNSYGRRPIQV 51 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTC--CTTC-----------------------------------CCSSSCCTTTS
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCC--CCCC-----------------------------------CCCCCCCHHHH
Confidence 5789999999999999999999998744 2221 36789999999
Q ss_pred HHhcCCHHHHHHHHhCC-CCC---CCCch-HHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHH
Q 045501 222 ALDTDDFELLTLLLDVS-NVT---LDDAY-ALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVT 296 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~g-~in---~~g~t-~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~ 296 (381)
|+ .|+.+++++|++.| +++ ..|.| |||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 52 A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~-~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 52 MM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF-LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp SC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC-HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCC-HHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 85 99999999999999 664 77898 9999999986 688899999999999999999999999999999999999
Q ss_pred HHhCCCCCcccCCCCCCHHHHH
Q 045501 297 LLSKGACASETTSDWQTAVAIC 318 (381)
Q Consensus 297 Ll~~ga~~~~~d~~g~tpL~~A 318 (381)
|+++|++++.+|..|.||.+-+
T Consensus 130 Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 130 LRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HSSCC-----------------
T ss_pred HHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999998754
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=2.9e-25 Score=193.05 Aligned_cols=142 Identities=20% Similarity=0.126 Sum_probs=100.0
Q ss_pred cCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHH
Q 045501 143 ENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKA 222 (381)
Q Consensus 143 ~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 222 (381)
..|.||||.|+..+..+.++.+++.+.. ++ .+..|.||||+|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~--~~------------------------------------~~~~~~t~L~~A 44 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMR--VK------------------------------------FNPLPLALLLDS 44 (239)
T ss_dssp ------------------------------------------------------------------------CHHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCC--cc------------------------------------cCchhhHHHHHH
Confidence 4688999999999998888888887552 11 135679999999
Q ss_pred HhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHH
Q 045501 223 LDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLL 298 (381)
Q Consensus 223 ~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll 298 (381)
+..|+.+++++|++.| ++ |..|.||||+|+..|+ .+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+
T Consensus 45 ~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 123 (239)
T 1ycs_B 45 SLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGH-TEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLV 123 (239)
T ss_dssp HHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTC-HHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999 65 4789999999999986 77889999999999999999999999999999999999999
Q ss_pred hCCCCCcccCCCCC-CHHHHH--HHhcC
Q 045501 299 SKGACASETTSDWQ-TAVAIC--RRVTR 323 (381)
Q Consensus 299 ~~ga~~~~~d~~g~-tpL~~A--~~~~~ 323 (381)
++|++++.++..|. ||||+| +..++
T Consensus 124 ~~ga~~~~~~~~~~~t~l~~a~~~~~g~ 151 (239)
T 1ycs_B 124 ESGAAVFAMTYSDMQTAADKCEEMEEGY 151 (239)
T ss_dssp HTTCCTTCCCSSSCCCHHHHCCSSSTTC
T ss_pred HcCCCcceecCCCCcchHHHHHHhhhcc
Confidence 99999999998887 999999 55554
No 77
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=1.7e-25 Score=177.07 Aligned_cols=112 Identities=20% Similarity=0.108 Sum_probs=104.7
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHH
Q 045501 211 LREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAA 286 (381)
Q Consensus 211 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~ 286 (381)
.|..|.||||+|+..|+.+++++|++.| ++ +..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGH-LKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 5789999999999999999999999999 65 4789999999999976 77889999999999999999999999999
Q ss_pred HcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcC
Q 045501 287 RRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTR 323 (381)
Q Consensus 287 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~ 323 (381)
..|+.+++++|+++|++++.+|..|.||||+|+..+.
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESM 121 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccH
Confidence 9999999999999999999999999999999976543
No 78
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.92 E-value=5.4e-24 Score=176.46 Aligned_cols=127 Identities=17% Similarity=0.127 Sum_probs=115.4
Q ss_pred CCCccHHHHHHhcCCHHHHHHHHhCC--CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHH
Q 045501 213 EKTVRRIHKALDTDDFELLTLLLDVS--NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAAR 287 (381)
Q Consensus 213 ~~g~t~L~~A~~~~~~~~v~~Ll~~g--~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~ 287 (381)
..+.++|+.|+..|+.++++.|++.+ ++ +..|+||||+|+..|+ .+++++|++.|++++.+|..|+||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGR-SAVVEMLIMRGARINVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCc-HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 45789999999999999999999985 44 4789999999999986 688899999999999999999999999999
Q ss_pred cCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc----------CCcChhHHhhcCCCCCch
Q 045501 288 RNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT----------RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 288 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~----------~~~~~~~~~~~g~t~~~~ 340 (381)
.|+.+++++|+++|++++.+|..|.||||+|+..+ +|++++..+..|.||+..
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 144 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDK 144 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGG
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHH
Confidence 99999999999999999999999999999999988 699999999999999753
No 79
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=2.5e-24 Score=167.05 Aligned_cols=108 Identities=25% Similarity=0.185 Sum_probs=99.0
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHH
Q 045501 211 LREKTVRRIHKALDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAA 286 (381)
Q Consensus 211 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~ 286 (381)
.+..|.||||+|+..|+.+++++|++.| +++ ..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQ-LEILEFLLLKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTC-HHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 3577899999999999999999999999 654 789999999999986 68889999999999999999999999999
Q ss_pred HcCChHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 045501 287 RRNEPEVMVTLLSKGACASETTSDWQTAVAICR 319 (381)
Q Consensus 287 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 319 (381)
..|+.+++++|+++|++++.+|..|.||||+|.
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 999999999999999999999999999999984
No 80
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=8.9e-25 Score=193.79 Aligned_cols=222 Identities=11% Similarity=0.019 Sum_probs=154.4
Q ss_pred HHHHHHhhHhcCcccCCCCCcccccccCCCCcCCh-hhHHHHHHHHHHHHHc---CHHHHHHHHHHHhhhHH-------H
Q 045501 70 AFNDILHRLYTGKLKAPPPEVSACVDDACSHDACP-PAINYAIELMYASAAF---QMKELVFLLQLWLRSMV-------E 138 (381)
Q Consensus 70 ~~~~~L~~lYtg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~A~~~---~~~~l~~~l~~~~~~~~-------~ 138 (381)
....+...+..|.+.....-.....+......... ..-......|+.|... +..++++++++.+.+.. .
T Consensus 13 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~ 92 (273)
T 2pnn_A 13 DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA 92 (273)
T ss_dssp CHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc
Confidence 46778888888887665444221112221111000 0001234567788876 88899999999987632 1
Q ss_pred ----HhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCC
Q 045501 139 ----KALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREK 214 (381)
Q Consensus 139 ----~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 214 (381)
. +..|.||||+|+..|+.++++.+++.++ +++..+..+.... ......+..
T Consensus 93 ~~~~~--d~~g~tpL~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~~~~~~---------------------~~~~~~~~~ 147 (273)
T 2pnn_A 93 SYTDS--YYKGQTALHIAIERRNMTLVTLLVENGA--DVQAAANGDFFKK---------------------TKGRPGFYF 147 (273)
T ss_dssp CCCST--TTTTCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCBCSGGGSS---------------------CSSSCCCCS
T ss_pred ccccc--cCCCCCHHHHHHHcCCHHHHHHHHHCCC--CcCcccccccccc---------------------ccccccccC
Confidence 2 4589999999999999999999999865 5665554331100 001123678
Q ss_pred CccHHHHHHhcCCHHHHHHHHh---CC-CC---CCCCchHHHHHHHcCCh--------HHHHHHHhccCCCCc-------
Q 045501 215 TVRRIHKALDTDDFELLTLLLD---VS-NV---TLDDAYALHYAAAYCNP--------KVFKEVLNMDLAGLN------- 272 (381)
Q Consensus 215 g~t~L~~A~~~~~~~~v~~Ll~---~g-~i---n~~g~t~Lh~A~~~g~~--------~~~~~lL~~~ga~in------- 272 (381)
|.||||+|+..|+.+++++|++ .| ++ |..|+||||+|+..|+. .+++++|+++|+++|
T Consensus 148 g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~ 227 (273)
T 2pnn_A 148 GELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEE 227 (273)
T ss_dssp CBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGG
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccccccc
Confidence 9999999999999999999999 88 65 47899999999998762 578889999999997
Q ss_pred ccCCCCCcHHHHHHHcCChHHHHHHHhCCC-CCcccCCCCCCHHH
Q 045501 273 LKDARGRTVLHVAARRNEPEVMVTLLSKGA-CASETTSDWQTAVA 316 (381)
Q Consensus 273 ~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga-~~~~~d~~g~tpL~ 316 (381)
.+|..|+||||+|+..|+.+++++|+++|| |+......+.+|-+
T Consensus 228 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 228 ITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred ccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 489999999999999999999999999999 88888877777643
No 81
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.91 E-value=8e-25 Score=194.37 Aligned_cols=129 Identities=16% Similarity=0.060 Sum_probs=117.7
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHhCC--CC---CCCCchHHHHHH-----HcCChHHHHHHHhccCCCCcccCCCCCc
Q 045501 211 LREKTVRRIHKALDTDDFELLTLLLDVS--NV---TLDDAYALHYAA-----AYCNPKVFKEVLNMDLAGLNLKDARGRT 280 (381)
Q Consensus 211 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~i---n~~g~t~Lh~A~-----~~g~~~~~~~lL~~~ga~in~~d~~g~T 280 (381)
.|..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+ ..| ..+++++|++.|++++..|..|+|
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~-~~~~v~~Ll~~g~~~~~~~~~g~t 185 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQD-DIETVLQLFRLGNINAKASQAGQT 185 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHH-HHHHHHHHHHHSCTTCCCTTTCCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhh-hHHHHHHHHHcCCCccccCCCCCC
Confidence 4789999999999999999999999999 44 478999999999 443 467888899999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc-----------CCcChhHHhhcCCCCCch
Q 045501 281 VLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT-----------RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 281 pLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~-----------~~~~~~~~~~~g~t~~~~ 340 (381)
|||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..+ +|++++..|..|.||+..
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~ 256 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMV 256 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHH
Confidence 999999999999999999999999999999999999999998 588888889999998643
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=3.3e-25 Score=184.67 Aligned_cols=142 Identities=8% Similarity=-0.056 Sum_probs=117.6
Q ss_pred chhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHh
Q 045501 145 VIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALD 224 (381)
Q Consensus 145 ~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 224 (381)
+.++|+.|+..|..+.+..++.... +.. .+..|+||||+|+.
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~----~~~----------------------------------~~~~g~T~Lh~A~~ 47 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY----EDK----------------------------------ESVLKSNILYDVLR 47 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS----SCH----------------------------------HHHHTTTHHHHHTT
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc----ccc----------------------------------cccCCCCHHHHHHH
Confidence 3477888998888776665554411 110 13678999999999
Q ss_pred cCCH----HHHHHHHhCC-CCC---CCCchHHHHHHHcCCh-----HHHHHHHhccCCCCcccCCCCC-cHHHHHHHcC-
Q 045501 225 TDDF----ELLTLLLDVS-NVT---LDDAYALHYAAAYCNP-----KVFKEVLNMDLAGLNLKDARGR-TVLHVAARRN- 289 (381)
Q Consensus 225 ~~~~----~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~-----~~~~~lL~~~ga~in~~d~~g~-TpLh~A~~~~- 289 (381)
+|+. +++++|++.| ++| ..|+||||+|+..|+. .+++++|+++|+|+|.+|..|+ ||||+|+..+
T Consensus 48 ~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~ 127 (186)
T 3t8k_A 48 NNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFV 127 (186)
T ss_dssp CSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCS
T ss_pred cCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCC
Confidence 9975 5899999999 765 7899999999999752 4789999999999999999999 9999999954
Q ss_pred ----ChHHHHHHHh-CCCCCcccCCCCCCHHHHHHHhcCC
Q 045501 290 ----EPEVMVTLLS-KGACASETTSDWQTAVAICRRVTRR 324 (381)
Q Consensus 290 ----~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~ 324 (381)
+.+++++|++ +|+|++.+|..|+||||+|++.++.
T Consensus 128 ~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 128 DENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp CHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCH
T ss_pred ChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCH
Confidence 3569999999 9999999999999999999987553
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=7.1e-24 Score=164.80 Aligned_cols=120 Identities=28% Similarity=0.300 Sum_probs=109.4
Q ss_pred CCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcC
Q 045501 214 KTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRN 289 (381)
Q Consensus 214 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~ 289 (381)
+|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|++.|++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH-LEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCc-HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 4899999999999999999999999 55 4789999999999976 78889999999999999999999999999999
Q ss_pred ChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcC
Q 045501 290 EPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQG 334 (381)
Q Consensus 290 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g 334 (381)
+.+++++|+++|++++.+|..|.|||++|+..++...+..+.+.|
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 999999999999999999999999999999987766665555554
No 84
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.91 E-value=3.1e-24 Score=188.09 Aligned_cols=161 Identities=19% Similarity=0.299 Sum_probs=123.4
Q ss_pred CCCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhc
Q 045501 1 MQSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYT 80 (381)
Q Consensus 1 ~~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYt 80 (381)
|++++.++.+|||+|.|+|++|+|||+|||++|+||++||++++.++ ......+++ .++++++|..+++|+||
T Consensus 22 l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~-e~~~~~i~l------~~v~~~~f~~ll~~~Yt 94 (256)
T 3hve_A 22 LSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKD-DGSTYKIEL------EGISVMVMREILDYIFS 94 (256)
T ss_dssp HHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC------------CEEEC------SSCCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcc-cCCCCeEEe------CCCCHHHHHHHHhhccC
Confidence 35789999999999999999999999999999999999999875421 012244444 46788999999999999
Q ss_pred CcccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHH
Q 045501 81 GKLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQL 160 (381)
Q Consensus 81 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l 160 (381)
|++.+...+ +.+++.+|.+|+++.+.+.|.++....... +|+...+.+|..++...+
T Consensus 95 ~~~~i~~~~--------------------v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~---~n~~~i~~~A~~~~~~~L 151 (256)
T 3hve_A 95 GQIRLNEDT--------------------IQDVVQAADLLLLTDLKTLCCEFLEGCIAA---ENCIGIRDFALHYCLHHV 151 (256)
T ss_dssp SCCCCC-CC--------------------HHHHHHHHHHHTCHHHHHHHHHHHHHTCCS---STTHHHHHHHHHTTCHHH
T ss_pred CCCcccHhH--------------------HHHHHHHHHHHChHHHHHHHHHHHHhhCCH---hhHHHHHHHHHHcCcHHH
Confidence 999988877 899999999999999999999988776555 799999999999999999
Q ss_pred HHHHHHhhhccCCCccccc--ccCcHHHHHHHH
Q 045501 161 RSVCIQRIAKSNLDNVCLE--KELPDEVSSEIK 191 (381)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ 191 (381)
.+.+.+++.++........ ...+.+....++
T Consensus 152 ~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL 184 (256)
T 3hve_A 152 HYLATEYLETHFRDVSSTEEFLELSPQKLKEVI 184 (256)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcchhcCCHHHHHHHH
Confidence 9999999876444333222 334555555554
No 85
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.91 E-value=1.5e-24 Score=178.66 Aligned_cols=141 Identities=21% Similarity=0.286 Sum_probs=119.0
Q ss_pred CCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCc
Q 045501 3 STNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGK 82 (381)
Q Consensus 3 ~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~ 82 (381)
+++.++.||||+|.|+|++|+|||+||+++|+||++||.+++.++ ....+.++ ++++++|..+|+|+|||+
T Consensus 27 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~---~~~~i~l~------~~~~~~f~~~l~~~Yt~~ 97 (172)
T 3htm_A 27 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES---KKNRVEIN------DVEPEVFKEMMCFIYTGK 97 (172)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGG---GTTEEEEC------SSCHHHHHHHHHHHHHSC
T ss_pred HHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCcccc---CCCeEEec------CCCHHHHHHHHHHHhCCC
Confidence 345678899999999999999999999999999999999875543 23455554 578889999999999999
Q ss_pred ccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHH
Q 045501 83 LKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRS 162 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~ 162 (381)
+.+...+ +.+++.+|.+|+++.+.+.|.++....... +|+...+.+|..++...|.+
T Consensus 98 ~~~~~~~--------------------~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~---~n~~~~~~~A~~~~~~~L~~ 154 (172)
T 3htm_A 98 APNLDKM--------------------ADDLLAAADKYALERLKVMCEDALCSNLSV---ENAAEILILADLHSADQLKT 154 (172)
T ss_dssp CTTGGGT--------------------HHHHHHHHHHTTCHHHHHHHHHHHHHTCCT---TTHHHHHHHHHHTTCHHHHH
T ss_pred CCCcHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHhCcHHHHH
Confidence 8876655 889999999999999999999888765555 78999999999999999999
Q ss_pred HHHHhhhccCCCc
Q 045501 163 VCIQRIAKSNLDN 175 (381)
Q Consensus 163 ~~~~~~~~~~~~~ 175 (381)
.|.+++.++....
T Consensus 155 ~~~~~i~~~~~~v 167 (172)
T 3htm_A 155 QAVDFINYHATDV 167 (172)
T ss_dssp HHHHHHHHTC---
T ss_pred HHHHHHHHHHHHH
Confidence 9999988754443
No 86
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=6.9e-25 Score=190.63 Aligned_cols=171 Identities=12% Similarity=-0.015 Sum_probs=123.9
Q ss_pred HHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHH
Q 045501 111 IELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEI 190 (381)
Q Consensus 111 ~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 190 (381)
...|+.|...+..+.++.+++++.+++.. ..+.||||.|+..|+.++++.+++.+. +++.
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~~---~~~~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~--------------- 65 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVKFN---PLPLALLLDSSLEGEFDLVQRIIYEVD--DPSL--------------- 65 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS--SCCC---------------
T ss_pred cccCchhhhhhhHHHHHHHhccCCCcccC---chhhHHHHHHHHcCCHHHHHHHHHcCC--CCCC---------------
Confidence 34577788889999999999999998755 788999999999999999999887744 2222
Q ss_pred HhhhhhhccccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhc
Q 045501 191 KSLRVKSNQESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNM 266 (381)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~ 266 (381)
.|..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+ .+++++|++
T Consensus 66 --------------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~-~~~v~~Ll~ 124 (239)
T 1ycs_B 66 --------------------PNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNN-VQVCKFLVE 124 (239)
T ss_dssp --------------------CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHH
T ss_pred --------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC-HHHHHHHHH
Confidence 3678999999999999999999999999 66 4789999999999986 789999999
Q ss_pred cCCCCcccCCCCC-cHHHHH--HHcCChHHHHHHHhCCCCCccc---------CCCCCCHHHHHHHhc
Q 045501 267 DLAGLNLKDARGR-TVLHVA--ARRNEPEVMVTLLSKGACASET---------TSDWQTAVAICRRVT 322 (381)
Q Consensus 267 ~ga~in~~d~~g~-TpLh~A--~~~~~~~~v~~Ll~~ga~~~~~---------d~~g~tpL~~A~~~~ 322 (381)
+|++++.++..|. ||||+| +..|+.+++++|+++|++++.. +..|.+|+++|...|
T Consensus 125 ~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G 192 (239)
T 1ycs_B 125 SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEG 192 (239)
T ss_dssp TTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSS
T ss_pred cCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCC
Confidence 9999999998877 999999 8889999999999999998876 667889988887765
No 87
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=1.4e-24 Score=187.34 Aligned_cols=135 Identities=23% Similarity=0.187 Sum_probs=119.0
Q ss_pred CCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCC
Q 045501 204 NTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGR 279 (381)
Q Consensus 204 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~ 279 (381)
.++..+..+..|.||||+|+..|+.+++++|++.| ++ +..|+||||+|+..|+ .+++++|++.|+++|.+|..|+
T Consensus 10 ~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~-~~~v~~Ll~~ga~~n~~d~~g~ 88 (229)
T 2vge_A 10 SPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGAN-YSIVDFLITAGANVNSPDSHGW 88 (229)
T ss_dssp CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCCCCCCCC
Confidence 33434445788999999999999999999999999 65 4789999999999986 7888999999999999999999
Q ss_pred cHHHHHHHcCChHHHHHHHhCCCCCcccC-CCCCCHHHHH--HHhc----------CCcChhHHhhcCCCCCc
Q 045501 280 TVLHVAARRNEPEVMVTLLSKGACASETT-SDWQTAVAIC--RRVT----------RRKDYLEATKQGQETNK 339 (381)
Q Consensus 280 TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A--~~~~----------~~~~~~~~~~~g~t~~~ 339 (381)
||||+|+..|+.+++++|+++|++++.++ ..|+||||+| +..+ +|++++..+..|.||+.
T Consensus 89 tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~ 161 (229)
T 2vge_A 89 TPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALW 161 (229)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESS
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHH
Confidence 99999999999999999999999999987 6999999999 6666 57788888887777754
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=1.1e-24 Score=181.56 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=120.9
Q ss_pred CccHHHHHHhcCCHHHHHHHHhCC--CCC-CCCchHHHHHHHcCChH---HHHHHHhccCCCCcccCCCCCcHHHHHHHc
Q 045501 215 TVRRIHKALDTDDFELLTLLLDVS--NVT-LDDAYALHYAAAYCNPK---VFKEVLNMDLAGLNLKDARGRTVLHVAARR 288 (381)
Q Consensus 215 g~t~L~~A~~~~~~~~v~~Ll~~g--~in-~~g~t~Lh~A~~~g~~~---~~~~lL~~~ga~in~~d~~g~TpLh~A~~~ 288 (381)
+.++|+.|++.|+.+.++.+++.+ ..+ ..|+||||+|+..|+.. +++++|+++|+|+|.+|..|+||||+|+..
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~ 85 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQG 85 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 568999999999999999999888 334 67999999999998643 589999999999999999999999999999
Q ss_pred CC------hHHHHHHHhCCCCCcccCCCCC-CHHHHHHHhc----------------CCcChhHHhhcCCCCCc------
Q 045501 289 NE------PEVMVTLLSKGACASETTSDWQ-TAVAICRRVT----------------RRKDYLEATKQGQETNK------ 339 (381)
Q Consensus 289 ~~------~~~v~~Ll~~ga~~~~~d~~g~-tpL~~A~~~~----------------~~~~~~~~~~~g~t~~~------ 339 (381)
|+ .+++++|+++|+|+|++|..|. ||||+|+..+ +|++++.+|..|.||+.
T Consensus 86 ~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 86 GGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQ 165 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTT
T ss_pred CCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcC
Confidence 87 5789999999999999999999 9999998732 79999999999999963
Q ss_pred hhhHHHHHHHHHhc
Q 045501 340 DQLCIDVLEREMRR 353 (381)
Q Consensus 340 ~~~~~~~l~~~~~~ 353 (381)
....+++|+..++.
T Consensus 166 ~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 166 KPIALKMMEDYIKK 179 (186)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 44556777765543
No 89
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.90 E-value=8.9e-25 Score=194.00 Aligned_cols=164 Identities=15% Similarity=0.210 Sum_probs=130.2
Q ss_pred CCCCCCCCeeeEEEEEc---CeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhH
Q 045501 2 QSTNPKETWLEAEIVVE---GKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRL 78 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~---~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~l 78 (381)
+.+|.++.||||+|.|+ |++|+|||+|||++|+||++||++++.++ ...+|+++++....++++++|..+++|+
T Consensus 24 ~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~---~~~~i~l~~~~~~~~v~~~~f~~ll~~~ 100 (279)
T 3i3n_A 24 NEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSES---RSGRVEMRKWSSEPGPEPDTVEAVIEYM 100 (279)
T ss_dssp HHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC-----------EEECCCCSSTTCSCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccc---cCCeEEeccccccCCCCHHHHHHHHHhh
Confidence 45677899999999998 99999999999999999999999886553 3467777766555689999999999999
Q ss_pred hcCcccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcH
Q 045501 79 YTGKLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLN 158 (381)
Q Consensus 79 Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 158 (381)
|||++.++..+ +.+++.+|.+|+++.+.+.|.++....... +|+...+.+|..+++.
T Consensus 101 Ytg~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~---~n~~~i~~~A~~~~~~ 157 (279)
T 3i3n_A 101 YTGRIRVSTGS--------------------VHEVLELADRFLLIRLKEFCGEFLKKKLHL---SNCVAIHSLAHMYTLS 157 (279)
T ss_dssp HHSEEEEETTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHHHHCCT---TTHHHHHHHHHHTTCH
T ss_pred CcCCcccCHHH--------------------HHHHHHHHHHHCcHHHHHHHHHHHHHcCCc---chHHHHHHHHHHcCcH
Confidence 99999987777 899999999999999999999988776555 8999999999999999
Q ss_pred HHHHHHHHhhhccCCCccccc--ccCcHHHHHHHH
Q 045501 159 QLRSVCIQRIAKSNLDNVCLE--KELPDEVSSEIK 191 (381)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ 191 (381)
.+.+.+.+++.++........ ...+.+....++
T Consensus 158 ~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL 192 (279)
T 3i3n_A 158 QLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWL 192 (279)
T ss_dssp HHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHh
Confidence 999999999876544333222 334555555444
No 90
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=5.6e-24 Score=168.13 Aligned_cols=123 Identities=18% Similarity=0.028 Sum_probs=111.1
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 221 (381)
+..|.||||+|+..|..++++.+++.+. +++. .+..|.||||+
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~-----------------------------------~~~~g~t~L~~ 51 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEAGA--DPNA-----------------------------------LNRFGRRPIQV 51 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHTTC--CTTC-----------------------------------CCTTCCTTTTT
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHcCC--CcCC-----------------------------------cCCCCCCHHHH
Confidence 6889999999999999999999998744 2222 36789999999
Q ss_pred HHhcCCHHHHHHHHhCC-CCC---CC-CchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHH
Q 045501 222 ALDTDDFELLTLLLDVS-NVT---LD-DAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVT 296 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~g-~in---~~-g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~ 296 (381)
|+. |+.+++++|++.| +++ .. |+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 52 A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 129 (136)
T 1d9s_A 52 MMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGF-LDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARY 129 (136)
T ss_dssp STT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTC-HHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHH
T ss_pred HHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 999 9999999999999 664 66 9999999999986 789999999999999999999999999999999999999
Q ss_pred HHhCCCC
Q 045501 297 LLSKGAC 303 (381)
Q Consensus 297 Ll~~ga~ 303 (381)
|+++|||
T Consensus 130 Ll~~Gad 136 (136)
T 1d9s_A 130 LHAATGD 136 (136)
T ss_dssp HHHHHCC
T ss_pred HHHcCCC
Confidence 9999986
No 91
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=1.6e-23 Score=169.44 Aligned_cols=122 Identities=17% Similarity=0.146 Sum_probs=109.2
Q ss_pred CccHHHHHHhcCCHHHHHHHHhCC--CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcC
Q 045501 215 TVRRIHKALDTDDFELLTLLLDVS--NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRN 289 (381)
Q Consensus 215 g~t~L~~A~~~~~~~~v~~Ll~~g--~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~ 289 (381)
+.||||+|+..|+.++++.|++.+ ++ +..|.||||+ +..|+ .+++++|+++|++++.+|..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGS-TAIALELLKQGASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCC-HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 578999999999999999999885 44 4789999999 88876 77888888999999999999999999999999
Q ss_pred ChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcC---------CcChhHHhhcCCCCC
Q 045501 290 EPEVMVTLLSKGACASETTSDWQTAVAICRRVTR---------RKDYLEATKQGQETN 338 (381)
Q Consensus 290 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~---------~~~~~~~~~~g~t~~ 338 (381)
+.+++++|+++|++++.+|..|.||||+|+..++ .++++..+..|.||+
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l 137 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPL 137 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHH
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHH
Confidence 9999999999999999999999999999999883 266666667777765
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=2.5e-23 Score=173.15 Aligned_cols=110 Identities=25% Similarity=0.262 Sum_probs=102.6
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccC-CCCCcHHHHHH
Q 045501 212 REKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKD-ARGRTVLHVAA 286 (381)
Q Consensus 212 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d-~~g~TpLh~A~ 286 (381)
+..|.||||+|+..|+.++++.|++ | ++ +..|+||||+|+..|+ .+++++|+++|+++|.+| ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGS-DKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 5688999999999999999999999 7 55 4889999999999986 678899999999999998 88999999999
Q ss_pred HcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcC
Q 045501 287 RRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTR 323 (381)
Q Consensus 287 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~ 323 (381)
..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK 155 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc
Confidence 9999999999999999999999999999999998753
No 93
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=2.7e-23 Score=178.44 Aligned_cols=112 Identities=24% Similarity=0.243 Sum_probs=104.4
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhcc-CCCCcccCCCCCcHHHHHH
Q 045501 212 REKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMD-LAGLNLKDARGRTVLHVAA 286 (381)
Q Consensus 212 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~-ga~in~~d~~g~TpLh~A~ 286 (381)
+..|.||||+|+..|+.+++++|++.| ++ +..|+||||+|+..|+ .+++++|++. |++++.+|..|+||||+|+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGH-KDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCC-HHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 577899999999999999999999999 65 4789999999999987 6788888888 9999999999999999999
Q ss_pred HcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCC
Q 045501 287 RRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRR 324 (381)
Q Consensus 287 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~ 324 (381)
..|+.+++++|+++|++++.+|..|.|||++|+..++-
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 186 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACA 186 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHH
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHH
Confidence 99999999999999999999999999999999887643
No 94
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.89 E-value=1.4e-22 Score=153.51 Aligned_cols=103 Identities=19% Similarity=0.244 Sum_probs=86.2
Q ss_pred CCCCCCCeeeEEEEEcC----eEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhH
Q 045501 3 STNPKETWLEAEIVVEG----KSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRL 78 (381)
Q Consensus 3 ~~~~~~~~~Dv~~~~~~----~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~l 78 (381)
+++.++.||||+|.|++ ++|+|||+|||+||+||++||.+++.++ ...+.++ ++++++|..+|+|+
T Consensus 1 ~l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~----~~~i~l~------~~~~~~f~~~l~~i 70 (109)
T 2vkp_A 1 SMFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV----KSEIHIP------DVEPAAFLILLKYM 70 (109)
T ss_dssp CCTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC----------CCEEEET------TSCHHHHHHHHHHH
T ss_pred CcccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC----CCeEEeC------CCCHHHHHHHHHHH
Confidence 47889999999999998 9999999999999999999999876543 2455554 67888999999999
Q ss_pred hcCcccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhh
Q 045501 79 YTGKLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLRS 135 (381)
Q Consensus 79 Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~ 135 (381)
|||++.+.+.+ +.+++.+|.+++++.+.+.|.++...
T Consensus 71 Yt~~~~~~~~~--------------------~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 71 YSDEIDLEADT--------------------VLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp HHCCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCCccCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 99999888777 89999999999999999998877643
No 95
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=4.3e-22 Score=154.62 Aligned_cols=122 Identities=28% Similarity=0.287 Sum_probs=109.8
Q ss_pred CchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHH
Q 045501 144 NVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKAL 223 (381)
Q Consensus 144 ~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 223 (381)
+|.||||+|+..|..++++.+++.+. +++. .+..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~--~~~~-----------------------------------~~~~g~t~L~~A~ 43 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA--DVNA-----------------------------------KDKNGRTPLHLAA 43 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC--CTTC-----------------------------------CCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC--CCCC-----------------------------------cCCCCCcHHHHHH
Confidence 58899999999999999999998744 2211 3678999999999
Q ss_pred hcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHh
Q 045501 224 DTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLS 299 (381)
Q Consensus 224 ~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~ 299 (381)
..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 44 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 44 RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH-LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh-HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 999999999999999 65 4789999999999976 788999999999999999999999999999999999999999
Q ss_pred CCCC
Q 045501 300 KGAC 303 (381)
Q Consensus 300 ~ga~ 303 (381)
+|||
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 9986
No 96
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.88 E-value=2.8e-23 Score=160.12 Aligned_cols=102 Identities=22% Similarity=0.332 Sum_probs=85.1
Q ss_pred CCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCc
Q 045501 3 STNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGK 82 (381)
Q Consensus 3 ~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~ 82 (381)
+++.++.+|||+|.++|++|+|||+|||+||+||++||.+++.++ ....+.++ ++++++|..+|+|+|||+
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~---~~~~i~l~------~~~~~~f~~ll~~~Yt~~ 88 (120)
T 2if5_A 18 EQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVD---QQNVYEID------FVSAEALTALMDFAYTAT 88 (120)
T ss_dssp HHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC--------CCSEEECC------SSCHHHHHHHHHHHHHSC
T ss_pred HHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCcccc---CCceEEeC------CCCHHHHHHHHHHHcCCC
Confidence 456789999999999999999999999999999999999875543 23454444 678889999999999999
Q ss_pred ccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHh
Q 045501 83 LKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWL 133 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~ 133 (381)
+.+...+ +.+++.+|.+++++.+.+.|.++.
T Consensus 89 ~~~~~~~--------------------~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 89 LTVSTAN--------------------VGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCCCGGG--------------------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHh
Confidence 9887666 899999999999999999887653
No 97
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.88 E-value=5.7e-23 Score=163.09 Aligned_cols=104 Identities=16% Similarity=0.316 Sum_probs=85.7
Q ss_pred CCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcC
Q 045501 2 QSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTG 81 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg 81 (381)
+++|.++.||||+|.|+|++|+|||+|||+||+||++||.+++.+.. .....|.++ ++++++|..+|+|+|||
T Consensus 39 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e-~~~~~I~l~------~v~~~~f~~lL~fiYtg 111 (144)
T 2ppi_A 39 SSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDD-GSTYKIELE------GISVMVMREILDYIFSG 111 (144)
T ss_dssp HHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC------CCCEEECC------SSCHHHHHHHHHHHTTS
T ss_pred HHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCcccc-CCCcEEEeC------CCCHHHHHHHHHHHhCC
Confidence 46788999999999999999999999999999999999998754311 123444443 67888999999999999
Q ss_pred cccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHH
Q 045501 82 KLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLW 132 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~ 132 (381)
++.+...+ +.+++.+|.+|+++.+.+.|.++
T Consensus 112 ~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~ 142 (144)
T 2ppi_A 112 QIRLNEDT--------------------IQDVVQAADLLLLTDLKTLCCEF 142 (144)
T ss_dssp CCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHTT
T ss_pred CCCCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHH
Confidence 99887777 89999999999999999888765
No 98
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.88 E-value=5.6e-23 Score=160.01 Aligned_cols=104 Identities=19% Similarity=0.285 Sum_probs=90.1
Q ss_pred CCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcC
Q 045501 2 QSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTG 81 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg 81 (381)
++++.++.||||+|.++|++|+|||+|||++|+||++||.+++.+ ....|.++ .++++++|..+|+|+|||
T Consensus 21 ~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~~~i~l~-----~~~~~~~f~~ll~~~Ytg 91 (127)
T 1r29_A 21 NRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR----NLSVINLD-----PEINPEGFNILLDFMYTS 91 (127)
T ss_dssp HHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT----TCSEEECC-----TTSCHHHHHHHHHHHHHS
T ss_pred HHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC----CCCEEEeC-----CCCCHHHHHHHHHHHcCC
Confidence 346778999999999999999999999999999999999987543 34555551 468889999999999999
Q ss_pred cccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhh
Q 045501 82 KLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLR 134 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~ 134 (381)
++.+...+ +.+++.+|.+++++.+.+.|.++..
T Consensus 92 ~~~~~~~~--------------------~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 92 RLNLREGN--------------------IMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp CCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CcCcCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99987777 8999999999999999998887653
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=1.1e-22 Score=177.33 Aligned_cols=110 Identities=25% Similarity=0.262 Sum_probs=102.2
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccC-CCCCcHHHHHH
Q 045501 212 REKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKD-ARGRTVLHVAA 286 (381)
Q Consensus 212 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d-~~g~TpLh~A~ 286 (381)
+..|.||||+|+..|+.++++.|++ | ++ +..|+||||+|+..|+ .+++++|+++|+++|.+| ..|+||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGS-DKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTC-HHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCC-HHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4678999999999999999999999 7 65 4789999999999987 688899999999999998 78999999999
Q ss_pred HcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcC
Q 045501 287 RRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTR 323 (381)
Q Consensus 287 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~ 323 (381)
..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 156 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK 156 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh
Confidence 9999999999999999999999999999999998643
No 100
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.88 E-value=1.8e-23 Score=160.66 Aligned_cols=100 Identities=24% Similarity=0.282 Sum_probs=86.9
Q ss_pred CCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcC
Q 045501 2 QSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTG 81 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg 81 (381)
+++|.++.||||+|.++|++|+|||+|||++|+||++||.+++ ...|.++ ++++++|..+|+|+|||
T Consensus 16 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~-------~~~i~l~------~~~~~~f~~ll~~iYtg 82 (119)
T 3b84_A 16 NKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS-------GGSVVLP------AGFAEIFGLLLDFFYTG 82 (119)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT-------CCCEEEC------GGGHHHHHHHHHHHHHS
T ss_pred HHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC-------CCeEEeC------CCCHHHHHHHHHHHcCC
Confidence 3466789999999999999999999999999999999999863 2345554 57788999999999999
Q ss_pred cccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhh
Q 045501 82 KLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLR 134 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~ 134 (381)
++.+...+ +.+++.+|.+++++.+.+.|.++..
T Consensus 83 ~~~~~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 83 HLALTSGN--------------------RDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp CCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred CCccCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 99988777 8999999999999999999887654
No 101
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=7.1e-22 Score=155.96 Aligned_cols=122 Identities=18% Similarity=0.162 Sum_probs=108.1
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 221 (381)
...+.||||+|+..|..++++.+++.+. +++. .|..|.||||+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~--~~~~-----------------------------------~~~~g~t~L~~ 53 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGA--DVNA-----------------------------------KDEYGLTPLYL 53 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTC--CTTC-----------------------------------CCTTSCCHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCC--CCCC-----------------------------------cCCCCCCHHHH
Confidence 3567899999999999999999998744 2221 36789999999
Q ss_pred HHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q 045501 222 ALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTL 297 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~L 297 (381)
|+..|+.+++++|++.| ++ |..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 54 A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 54 ATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGH-LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 99999999999999999 65 4789999999999986 7889999999999999999999999999999999999999
Q ss_pred HhCC
Q 045501 298 LSKG 301 (381)
Q Consensus 298 l~~g 301 (381)
+++|
T Consensus 133 l~~G 136 (136)
T 2jab_A 133 QKLN 136 (136)
T ss_dssp HHC-
T ss_pred HHcC
Confidence 9987
No 102
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.87 E-value=8.2e-24 Score=169.04 Aligned_cols=127 Identities=22% Similarity=0.307 Sum_probs=86.2
Q ss_pred CCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCc
Q 045501 3 STNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGK 82 (381)
Q Consensus 3 ~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~ 82 (381)
+++.++.+|||+|.++|++|+|||+||+++|+||++||.+++.++ ....+.++ ++++++|..+|+|+|||+
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~---~~~~i~l~------~~~~~~~~~~l~~~Y~~~ 88 (145)
T 4eoz_A 18 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES---KKNRVEIN------DVEPEVFKEMMCFIYTGK 88 (145)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHH---HHTEEEEC------SSCHHHHHHHHHHHHHSC
T ss_pred HHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCC---CCceEEec------CCCHHHHHHHHHhhccCc
Confidence 345678899999999999999999999999999999999874432 22454544 578889999999999999
Q ss_pred ccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHH
Q 045501 83 LKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLR 161 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~ 161 (381)
+.+...+ +.+++.+|.+|+++.+.+.|.+........ +|+...+.+|..++..+|.
T Consensus 89 ~~~~~~~--------------------~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~---~n~~~~l~~A~~~~~~~Lk 144 (145)
T 4eoz_A 89 APNLDKM--------------------ADDLLAAADKYALERLKVMCEDALCSNLSV---ENAAEILILADLHSADQLK 144 (145)
T ss_dssp CTTGGGT--------------------HHHHHHHHHHTTCHHHHHHHHCC-----------------------------
T ss_pred cCCcHHH--------------------HHHHHHHHHHhCHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHhCHHHhc
Confidence 8876655 889999999999999999999888776666 8999999999999987664
No 103
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.87 E-value=3.8e-23 Score=159.42 Aligned_cols=100 Identities=24% Similarity=0.345 Sum_probs=86.7
Q ss_pred CCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcC
Q 045501 2 QSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTG 81 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg 81 (381)
+++|.++.+|||+|.++|++|+|||+|||+||+||++||.++ ..+++++ ++++++|..+|+|+|||
T Consensus 20 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~--------~~~i~l~------~~~~~~f~~ll~~~Ytg 85 (121)
T 1buo_A 20 NQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN--------SQHYTLD------FLSPKTFQQILEYAYTA 85 (121)
T ss_dssp HHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC--------CSEEEEC------SSCHHHHHHHHHHHHHS
T ss_pred HHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC--------CcEEEeC------CCCHHHHHHHHHhhcCC
Confidence 345678899999999999999999999999999999999864 2344443 67889999999999999
Q ss_pred cccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhh
Q 045501 82 KLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLRS 135 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~ 135 (381)
++.+.+.+ +.+++.+|.+++++.+.+.|.++...
T Consensus 86 ~~~~~~~~--------------------~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 86 TLQAKAED--------------------LDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp CCCCCGGG--------------------HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CcCCCHHH--------------------HHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 99887766 89999999999999999999877654
No 104
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.87 E-value=8.4e-23 Score=156.37 Aligned_cols=101 Identities=19% Similarity=0.334 Sum_probs=86.8
Q ss_pred CCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcC
Q 045501 2 QSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTG 81 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg 81 (381)
+++|.++.+|||+|.++|++|+|||+|||++|+||++||.++ ....+.++ ..++++++|..+|+|+|||
T Consensus 14 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-------~~~~i~l~----~~~~~~~~f~~ll~~~Yt~ 82 (116)
T 2vpk_A 14 NKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST-------SENNVFLD----QSQVKADGFQKLLEFIYTG 82 (116)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC-------CCSCEECC----TTTCCHHHHHHHHHHHHHS
T ss_pred HHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC-------CCCeEEee----cCCCCHHHHHHHHHHHcCC
Confidence 345678899999999999999999999999999999999876 12344332 2368899999999999999
Q ss_pred cccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHh
Q 045501 82 KLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWL 133 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~ 133 (381)
++.+...+ +.+++.+|.+++++.+.+.|.+..
T Consensus 83 ~~~~~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l 114 (116)
T 2vpk_A 83 TLNLDSWN--------------------VKEIHQAADYLKVEEVVTKCKIKM 114 (116)
T ss_dssp CCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99987777 899999999999999999988765
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=7.7e-22 Score=144.90 Aligned_cols=89 Identities=34% Similarity=0.397 Sum_probs=73.3
Q ss_pred CCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcC
Q 045501 214 KTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRN 289 (381)
Q Consensus 214 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~ 289 (381)
+|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH-LEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 3788888888888888888888888 55 3678888888888875 67788888888888888888888888888888
Q ss_pred ChHHHHHHHhCCCC
Q 045501 290 EPEVMVTLLSKGAC 303 (381)
Q Consensus 290 ~~~~v~~Ll~~ga~ 303 (381)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 88888888888875
No 106
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.87 E-value=4.8e-23 Score=161.83 Aligned_cols=102 Identities=24% Similarity=0.288 Sum_probs=86.1
Q ss_pred CCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcC
Q 045501 2 QSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTG 81 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg 81 (381)
+++|.++.||||+|.|+|++|+|||+|||++|+||++||.+++ ...|.++ ++++++|..+|+|+|||
T Consensus 17 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~-------~~~i~l~------~~~~~~f~~lL~fiYtg 83 (135)
T 2yy9_A 17 NKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT-------GGSVVLP------AGFAEIFGLLLDFFYTG 83 (135)
T ss_dssp HHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-----------CCEEEC------GGGHHHHHHHHHHHHHS
T ss_pred HHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC-------CCeEEeC------CCCHHHHHHHHHHHhCC
Confidence 4567789999999999999999999999999999999999763 2345544 56788999999999999
Q ss_pred cccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhhH
Q 045501 82 KLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLRSM 136 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~~ 136 (381)
++.+...+ +.+++.+|.+|+++.+++.|.++....
T Consensus 84 ~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~l~~~ 118 (135)
T 2yy9_A 84 HLALTSGN--------------------RDQVLLAAKELRVPEAVELCQSFQPQT 118 (135)
T ss_dssp CCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHCCC--
T ss_pred CCCCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHHHh
Confidence 99988777 899999999999999999998876554
No 107
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.87 E-value=6.8e-23 Score=157.43 Aligned_cols=98 Identities=18% Similarity=0.309 Sum_probs=85.2
Q ss_pred CCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcC
Q 045501 2 QSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTG 81 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg 81 (381)
+++|.++.+|||+|.++|++|+|||+|||+||+||++||.+.. .. +.+.++++++|..+|+|+|||
T Consensus 19 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~--------~~------i~l~~~~~~~f~~ll~~~Ytg 84 (119)
T 2q81_A 19 NQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQK--------DV------VHLDISNAAGLGQVLEFMYTA 84 (119)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC--------SG------GGGGGCCHHHHHHHHHHHHHS
T ss_pred HHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCCC--------CE------EEeCCCCHHHHHHHHHHHcCC
Confidence 3466788999999999999999999999999999999998631 22 333467889999999999999
Q ss_pred cccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHh
Q 045501 82 KLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWL 133 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~ 133 (381)
++.+...+ +.+++.+|.+++++.+++.|.++.
T Consensus 85 ~~~i~~~~--------------------~~~ll~~A~~l~i~~L~~~C~~~l 116 (119)
T 2q81_A 85 KLSLSPEN--------------------VDDVLAVATFLQMQDIITACHALK 116 (119)
T ss_dssp CCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99988777 899999999999999999887764
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=2.4e-22 Score=153.82 Aligned_cols=104 Identities=22% Similarity=0.201 Sum_probs=95.8
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHH
Q 045501 211 LREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAA 286 (381)
Q Consensus 211 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~ 286 (381)
+|..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGH-AEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTC-HHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc-HHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 4789999999999999999999999999 65 4789999999999976 78999999999999999999999999999
Q ss_pred HcCChHHHHHHHhCCCCCcccCCCCCCHH
Q 045501 287 RRNEPEVMVTLLSKGACASETTSDWQTAV 315 (381)
Q Consensus 287 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL 315 (381)
..|+.+++++|+++|++++.++..|.||-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999984
No 109
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.86 E-value=1.7e-22 Score=182.39 Aligned_cols=136 Identities=21% Similarity=0.295 Sum_probs=113.9
Q ss_pred CCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCccc
Q 045501 5 NPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLK 84 (381)
Q Consensus 5 ~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~ 84 (381)
+.++.+|||+|.|+|++|+|||+|||+||+||++||.+++.++ ...+|+++ ++++++|..+|+|+|||++.
T Consensus 169 ~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~---~~~~i~l~------~~~~~~f~~~L~~iYt~~~~ 239 (312)
T 3hqi_A 169 WENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES---KKNRVEIN------DVEPEVFKEMMCFIYTGKAP 239 (312)
T ss_dssp HHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC--------CCSEEEEC------SSCHHHHHHHHHHHHHSCCT
T ss_pred HhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCcccc---CCceEEec------CCCHHHHHHHHHhhcCCCCC
Confidence 4567899999999999999999999999999999999875543 33555554 57888999999999999877
Q ss_pred CCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHH
Q 045501 85 APPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVC 164 (381)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~ 164 (381)
+...+ +.+++.+|.+|+++.+...|.+.+...... +++...|.+|..+++..|.+.|
T Consensus 240 ~~~~~--------------------~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~---~n~~~~l~~A~~~~~~~L~~~~ 296 (312)
T 3hqi_A 240 NLDKM--------------------ADDLLAAADKYALERLKVMCEDALCSNLSV---ENAAEILILADLHSADQLKTQA 296 (312)
T ss_dssp THHHH--------------------HHHHHHHHHHTTCHHHHHHHHHHHHTTCCT---TTHHHHHHHHHHTTCHHHHHHH
T ss_pred ChHHH--------------------HHHHHHHHHHhCHHHHHHHHHHHHHccCCH---HHHHHHHHHHHHhCCHHHHHHH
Confidence 64333 899999999999999999999988765555 7899999999999999999999
Q ss_pred HHhhhccC
Q 045501 165 IQRIAKSN 172 (381)
Q Consensus 165 ~~~~~~~~ 172 (381)
++++..+.
T Consensus 297 ~~~i~~~~ 304 (312)
T 3hqi_A 297 VDFINYHA 304 (312)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 99988643
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=3.1e-21 Score=171.08 Aligned_cols=187 Identities=14% Similarity=0.045 Sum_probs=131.6
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 221 (381)
|..+.+.++++...|+....+........... ...............+.......... . ..........++|+.
T Consensus 63 d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~-~kP~~~s~~~~~~~fI~aKYl~~~f~----~-~~~~~~~~~l~~l~~ 136 (278)
T 1dcq_A 63 DVLGTSELLLAKNIGNAGFNEIMECCLPSEDP-VKPNPGSDMIARKDYITAKYMERRYA----R-KKHADTAAKLHSLCE 136 (278)
T ss_dssp SCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSC-CSCCTTCCHHHHHHHHHHHHTTCTTS----C-CCSSSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCcHHHHHHHHhhCChhhc-CCCCCCCCHHHHHHHHHHHHHHhhcc----c-ccccccchhhhhhhh
Confidence 67788899999999986655544332211010 01011111112222221111100000 0 001112344679999
Q ss_pred HHhcCCHHHHHHHHhCC-CC---------CCCCchHHHHHHHcC--ChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcC
Q 045501 222 ALDTDDFELLTLLLDVS-NV---------TLDDAYALHYAAAYC--NPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRN 289 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~g-~i---------n~~g~t~Lh~A~~~g--~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~ 289 (381)
|+..|+.+.+..+++.| ++ +..|+||||+|+..| +..+++++|+++|+++|.+|..|+||||+|+..|
T Consensus 137 a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g 216 (278)
T 1dcq_A 137 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTD 216 (278)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTT
T ss_pred HhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcC
Confidence 99999999999999999 53 367999999999993 2478999999999999999999999999999999
Q ss_pred ChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcC
Q 045501 290 EPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQG 334 (381)
Q Consensus 290 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g 334 (381)
+.+++++|+++|+|++.+|..|.||||+|+..++...+..+...|
T Consensus 217 ~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 217 NAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999999999999987755555554444
No 111
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.86 E-value=1.4e-22 Score=159.89 Aligned_cols=103 Identities=19% Similarity=0.267 Sum_probs=88.7
Q ss_pred CCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCc
Q 045501 3 STNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGK 82 (381)
Q Consensus 3 ~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~ 82 (381)
++|.++.||||+|.|+|++|+|||+|||+||+||++||.+++.+ ...+.++ .++++++|..+|+|+|||+
T Consensus 29 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~~~i~l~-----~~v~~~~~~~lL~~~Ytg~ 98 (138)
T 2z8h_A 29 DQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA-----ELTVTLP-----EEVTVKGFEPLIQFAYTAK 98 (138)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT-----TEEEECC-----TTSCHHHHHHHHHHHHHSC
T ss_pred HHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC-----CceEEeC-----CCCCHHHHHHHHHHhcCCC
Confidence 45667899999999999999999999999999999999987543 1344432 3688999999999999999
Q ss_pred ccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhh
Q 045501 83 LKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLRS 135 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~ 135 (381)
+.+...+ +.+++.+|.+++++.+.+.|.++...
T Consensus 99 ~~i~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~~ 131 (138)
T 2z8h_A 99 LILSKDN--------------------VDEVCRCVEFLSVHNIEESCFQFLKF 131 (138)
T ss_dssp CCCCTTT--------------------HHHHHHHHHHHTCGGGHHHHHHHTTC
T ss_pred cccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9988777 89999999999999999999887654
No 112
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=1.6e-20 Score=168.36 Aligned_cols=126 Identities=19% Similarity=0.167 Sum_probs=108.3
Q ss_pred CCCccHHHHHHhcCCHHHHHHHHhCC-CC---------CCCCchHHHHHHHc---CChHHHHHHHhccCCCCcccCCCCC
Q 045501 213 EKTVRRIHKALDTDDFELLTLLLDVS-NV---------TLDDAYALHYAAAY---CNPKVFKEVLNMDLAGLNLKDARGR 279 (381)
Q Consensus 213 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---------n~~g~t~Lh~A~~~---g~~~~~~~lL~~~ga~in~~d~~g~ 279 (381)
..+.++|+.|+..|+.+.++.|++.| ++ +..|.||||+|+.. |+ .+++++|+++|+++|.+|..|+
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~-~~iv~~Ll~~gadvn~~d~~G~ 227 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQAS-LPLVDFIIQNGGHLDAKAADGN 227 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTT-HHHHHHHHHHSSCTTCCCTTCC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCc-HHHHHHHHhcCCCCCCCCCCCC
Confidence 34567899999999999999999999 64 45799999999997 44 7899999999999999999999
Q ss_pred cHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHh----hcCCCCCc
Q 045501 280 TVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEAT----KQGQETNK 339 (381)
Q Consensus 280 TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~----~~g~t~~~ 339 (381)
||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++...+..+. ..|.||+.
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~g~tpLh 291 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLH 291 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHTTSSCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCChhH
Confidence 9999999999999999999999999999999999999999987754444333 24455543
No 113
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=1e-21 Score=176.14 Aligned_cols=141 Identities=16% Similarity=0.100 Sum_probs=112.8
Q ss_pred chhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHh
Q 045501 145 VIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALD 224 (381)
Q Consensus 145 ~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 224 (381)
..++|+.|+..+..+.+..++..+. +++..... . ..+..|.||||+|+.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~--d~~~~~~~----------------------------~-~~~~~g~t~Lh~A~~ 199 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQ--DFGQPLPG----------------------------P-DAQAPEELVLHLAVK 199 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTC--CTTSCEEC----------------------------S-SSCSCEECHHHHHHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCC--cccccCCC----------------------------c-ccCCCCccHHHHHHH
Confidence 4567999999998888887776643 22221000 0 037889999999999
Q ss_pred c---CCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHH
Q 045501 225 T---DDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTL 297 (381)
Q Consensus 225 ~---~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~L 297 (381)
. |+.+++++|+++| ++| ..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 200 ~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~-~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~L 278 (301)
T 2b0o_E 200 VANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQ-PDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 278 (301)
T ss_dssp TCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred hcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 7 8999999999999 664 789999999999986 6899999999999999999999999999999999999999
Q ss_pred HhCCCCCcccCCCCCCHHHHHHHhcC
Q 045501 298 LSKGACASETTSDWQTAVAICRRVTR 323 (381)
Q Consensus 298 l~~ga~~~~~d~~g~tpL~~A~~~~~ 323 (381)
+++|++ .|.||||+|+.+|+
T Consensus 279 l~~ga~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 279 EQAQAG------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHH------TTSSCCC-------
T ss_pred HHhcCC------CCCChhHHHHhcCC
Confidence 999987 58999999998875
No 114
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.85 E-value=3.3e-21 Score=141.50 Aligned_cols=92 Identities=28% Similarity=0.270 Sum_probs=82.4
Q ss_pred CCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhc
Q 045501 243 DDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVT 322 (381)
Q Consensus 243 ~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 322 (381)
+|+||||+|+..|+ .+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGH-LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCC-HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 48999999999986 67888999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCcChhHHhhcCC
Q 045501 323 RRKDYLEATKQGQ 335 (381)
Q Consensus 323 ~~~~~~~~~~~g~ 335 (381)
+...+..+...|.
T Consensus 80 ~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 80 HLEVVKLLLEAGA 92 (93)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 7666666665553
No 115
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.85 E-value=1.7e-22 Score=157.58 Aligned_cols=102 Identities=25% Similarity=0.382 Sum_probs=83.2
Q ss_pred CCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcC
Q 045501 2 QSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTG 81 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg 81 (381)
+++|.++.||||+|.|+|++|+|||+|||++|+||++||.++ ....+.++ .++++++|..+|+|+|||
T Consensus 25 ~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~-------~~~~i~l~-----~~~~~~~f~~ll~~iYtg 92 (129)
T 3ga1_A 25 NEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS-------RSAVVELP-----AAVQPQSFQQILSFCYTG 92 (129)
T ss_dssp HHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC-------CCSEEECC-----TTCCHHHHHHHHHHHHHS
T ss_pred HHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC-------CCCEEEEC-----CCCCHHHHHHHHHHHhCC
Confidence 345678999999999999999999999999999999999976 22344443 268889999999999999
Q ss_pred cccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhh
Q 045501 82 KLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLRS 135 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~ 135 (381)
++.+...+ +.+++.+|.+++++.+.+.|.++...
T Consensus 93 ~~~i~~~~--------------------~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 93 RLSMNVGD--------------------QDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp EEECCTTT--------------------HHHHHHHHHHTTBTTSSCC-------
T ss_pred ccccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99998877 89999999999999998877766543
No 116
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.85 E-value=6.8e-23 Score=158.63 Aligned_cols=101 Identities=21% Similarity=0.273 Sum_probs=83.9
Q ss_pred CCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcC
Q 045501 2 QSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTG 81 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg 81 (381)
+++|.++.+|||+|.|+|++|+|||+|||+||+||++||.+++.+ . ..+.++ .++++++|..+|+|+|||
T Consensus 21 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e----~-~~i~l~-----~~v~~~~f~~lL~~iYtg 90 (124)
T 2ihc_A 21 NDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG----E-LNITLP-----EEVTVKGFEPLIQFAYTA 90 (124)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC-------C-EEEECC-----TTSCHHHHHHHHHHHHHS
T ss_pred HHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC----C-ceEeec-----CCcCHHHHHHHHHHhcCC
Confidence 345677899999999999999999999999999999999987543 1 344432 368899999999999999
Q ss_pred cccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHH
Q 045501 82 KLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLW 132 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~ 132 (381)
++.+...+ +.+++.+|.+++++.+.+.|.++
T Consensus 91 ~~~i~~~~--------------------v~~ll~~A~~~~~~~L~~~C~~~ 121 (124)
T 2ihc_A 91 KLILSKEN--------------------VDEVCKCVEFLSVHNIEESCFQF 121 (124)
T ss_dssp EEEEETTT--------------------HHHHHHHHHHHTBSSCCGGGGGT
T ss_pred CcccCHHH--------------------HHHHHHHHHHHCCHHHHHHHHHH
Confidence 99887777 89999999999999888766544
No 117
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.84 E-value=8.5e-23 Score=158.52 Aligned_cols=99 Identities=20% Similarity=0.267 Sum_probs=83.4
Q ss_pred CCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcC
Q 045501 2 QSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTG 81 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg 81 (381)
++++.++.||||+|.|+|++|+|||+|||++|+||++||.+.+.+ ...+.+++ ++++++|..+|+|+|||
T Consensus 24 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~~~i~l~~-----~~~~~~f~~~l~~iYtg 93 (125)
T 3ohu_A 24 NDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-----DLVVSLPE-----EVTARGFGPLLQFAYTA 93 (125)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-----SCEEECCT-----TCCHHHHHHHHHHHTTS
T ss_pred HHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-----CcEEEeCC-----CCCHHHHHHHHHhHcCC
Confidence 345678899999999999999999999999999999999987432 23444432 28889999999999999
Q ss_pred cccCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHH
Q 045501 82 KLKAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQ 130 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~ 130 (381)
++.+...+ +.+++.+|.+++++.+.+.|.
T Consensus 94 ~~~~~~~~--------------------v~~ll~~A~~l~i~~L~~~C~ 122 (125)
T 3ohu_A 94 KLLLSREN--------------------IREVIRCAEFLRMHNLEDSCF 122 (125)
T ss_dssp EEEECTTT--------------------HHHHHHHHHHHTBSSCTTSSC
T ss_pred ceEECHHH--------------------HHHHHHHHHHhCCHHHHHHHH
Confidence 99988877 899999999999988775553
No 118
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.84 E-value=1e-22 Score=187.56 Aligned_cols=153 Identities=13% Similarity=-0.017 Sum_probs=125.2
Q ss_pred cCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhcc
Q 045501 120 FQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQ 199 (381)
Q Consensus 120 ~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 199 (381)
++.+++++++.+.+ .++.||||+|+..|+.++++.+++.+.... .
T Consensus 76 ~~~~~~~~~l~~~g---------~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~--~------------------------ 120 (376)
T 2aja_A 76 RNAKQLWSDAHKKG---------IKSEVICFVAAITGCSSALDTLCLLLTSDE--I------------------------ 120 (376)
T ss_dssp TTCTTHHHHHHHHT---------CCHHHHHHHHHHHCCHHHHHHHTTC--CCS--S------------------------
T ss_pred CCCHHHHHHHHHcC---------CCcCCHHHHHHHcCCHHHHHHHHHcCCcHH--H------------------------
Confidence 56777887776654 445699999999999999999988744100 0
Q ss_pred ccccCCCCCCCCCCCCccHHHHHHhcCCHHHHHHHHhCC-C-----CCCCCchHHHHHHHcCChHHHHHHHhccCCCCcc
Q 045501 200 ESEANTKEVDPLREKTVRRIHKALDTDDFELLTLLLDVS-N-----VTLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNL 273 (381)
Q Consensus 200 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~-----in~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~ 273 (381)
.+..+..|.||||+|+..|+.++|++|+++| + ++..++||||+|+..|+ .+++++|+++|++++.
T Consensus 121 --------~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~-~eiv~~Ll~~ga~~~~ 191 (376)
T 2aja_A 121 --------VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGH-LHVLNRLCELAPTEAT 191 (376)
T ss_dssp --------CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTC-HHHHHHHHHSCGGGHH
T ss_pred --------HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCC-HHHHHHHHHcCCccch
Confidence 0002556789999999999999999999999 5 23334999999999987 7899999999999988
Q ss_pred --cCCCCCcHHHHHH-HcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcC
Q 045501 274 --KDARGRTVLHVAA-RRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTR 323 (381)
Q Consensus 274 --~d~~g~TpLh~A~-~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~ 323 (381)
.|..|+||||+|+ ..|+.+++++|+++|++ |.|||++|+..|+
T Consensus 192 ~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~ 237 (376)
T 2aja_A 192 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGE 237 (376)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTT
T ss_pred hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCC
Confidence 8999999999999 99999999999998853 8899999999985
No 119
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=7e-21 Score=182.89 Aligned_cols=123 Identities=20% Similarity=0.202 Sum_probs=108.3
Q ss_pred CccHHHHHHhcCCHHHHHHHHhCC-CC---------CCCCchHHHHHHH---cCChHHHHHHHhccCCCCcccCCCCCcH
Q 045501 215 TVRRIHKALDTDDFELLTLLLDVS-NV---------TLDDAYALHYAAA---YCNPKVFKEVLNMDLAGLNLKDARGRTV 281 (381)
Q Consensus 215 g~t~L~~A~~~~~~~~v~~Ll~~g-~i---------n~~g~t~Lh~A~~---~g~~~~~~~lL~~~ga~in~~d~~g~Tp 281 (381)
..+.||.|+..|+.++++.|++.| ++ +..|+||||+|+. .|+ .+++++|+++|+|+|.+|..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~-~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQAS-LPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTT-HHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhccccc-HHHHHHHHHcCCCCCccCCCCCcH
Confidence 347899999999999999999999 65 3579999999976 765 789999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHhhcCCCCC
Q 045501 282 LHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEATKQGQETN 338 (381)
Q Consensus 282 Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~~~g~t~~ 338 (381)
||+|+..|+.+++++|+++|||++++|..|.||||+|+..++...+..+...|..++
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999997666666666665443
No 120
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.84 E-value=3.1e-21 Score=165.52 Aligned_cols=133 Identities=13% Similarity=0.080 Sum_probs=104.1
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 221 (381)
+.+|.||||+|+..|..++++.+++.+. +++. .|..|.||||+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~-----------------------------------~~~~g~t~L~~ 112 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRV--GVNG-----------------------------------LDKAGSTALYW 112 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTC--CTTC-----------------------------------CCTTSCCHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCC--Cccc-----------------------------------cCCCCCCHHHH
Confidence 6889999999999999999999988644 2221 36789999999
Q ss_pred HHhcCCHHHHHHHHhC-C-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHH
Q 045501 222 ALDTDDFELLTLLLDV-S-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVT 296 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~-g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~ 296 (381)
|+..|+.+++++|++. | ++ |..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.++++.
T Consensus 113 A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~ 191 (222)
T 3ehr_A 113 ACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGY-ADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKK 191 (222)
T ss_dssp HHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTC-HHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHH
Confidence 9999999999999998 7 65 4889999999999986 789999999999999999999999999999999999999
Q ss_pred HHhCCCCCcccCCCCC
Q 045501 297 LLSKGACASETTSDWQ 312 (381)
Q Consensus 297 Ll~~ga~~~~~d~~g~ 312 (381)
|+++|++.+.++..|.
T Consensus 192 l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 192 KQGTDAVRTLSNAEDY 207 (222)
T ss_dssp ----------------
T ss_pred Hhccchhhhccchhhh
Confidence 9999999988776553
No 121
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=6.7e-21 Score=174.86 Aligned_cols=119 Identities=19% Similarity=0.133 Sum_probs=107.2
Q ss_pred CCCCccHHHHHHhc-CCHHHHHHHHhCC-CCC-----CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHH
Q 045501 212 REKTVRRIHKALDT-DDFELLTLLLDVS-NVT-----LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHV 284 (381)
Q Consensus 212 ~~~g~t~L~~A~~~-~~~~~v~~Ll~~g-~in-----~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~ 284 (381)
...+.|+||+|+.. |+.++++.|++.| ++| ..|.||||+|+..|+ .+++++|+++|+++|.+|..|+||||+
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~-~~iv~~LL~~Gadvn~~d~~G~TpLh~ 274 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANS-LLACEFLLQNGANVNQADSAGRGPLHH 274 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCC-HHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 34567899999999 9999999999999 664 678999999999986 778899999999999999999999999
Q ss_pred HHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHh
Q 045501 285 AARRNEPEVMVTLLSKGACASETTSDWQTAVAICRRVTRRKDYLEAT 331 (381)
Q Consensus 285 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~ 331 (381)
|+..|+.+++++|+++|++++.+|..|.||||+|+..++...+..+.
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 99999999999999999999999999999999999987655444443
No 122
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.83 E-value=7.8e-22 Score=150.53 Aligned_cols=92 Identities=20% Similarity=0.352 Sum_probs=78.0
Q ss_pred CCCCCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcC
Q 045501 2 QSTNPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTG 81 (381)
Q Consensus 2 ~~~~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg 81 (381)
++++.++.||||+|.|+|++|+|||+|||+||+||++||.++ ...+.+ .++++++|..+|+|+|||
T Consensus 23 ~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~--------~~~i~l------~~~~~~~f~~~l~~~Ytg 88 (116)
T 3fkc_A 23 NEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA--------GQVVEL------SFIRAEIFAEILNYIYSS 88 (116)
T ss_dssp HHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC--------CSEEEE------CSSCHHHHHHHHHHHTTS
T ss_pred HHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC--------CCEEEe------CCCCHHHHHHHHHhhcCC
Confidence 345667899999999999999999999999999999999875 124444 468888999999999999
Q ss_pred cc-cCCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHH
Q 045501 82 KL-KAPPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVF 127 (381)
Q Consensus 82 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~ 127 (381)
++ .+...+ +.+++.+|.+++++.+.+
T Consensus 89 ~~~~~~~~~--------------------~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 89 KIVRVRSDL--------------------LDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CCCSCCHHH--------------------HHHHHHHHHHHTCHHHHT
T ss_pred CcCCCCHHH--------------------HHHHHHHHHHhCccccCc
Confidence 98 565555 889999999999998763
No 123
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.83 E-value=1.7e-20 Score=148.18 Aligned_cols=101 Identities=19% Similarity=0.063 Sum_probs=93.5
Q ss_pred CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHH
Q 045501 241 TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRR 320 (381)
Q Consensus 241 n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 320 (381)
|..|+||||+|+..|+ .+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 7 ~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 85 (137)
T 3c5r_A 7 NHRGETLLHIASIKGD-IPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAK 85 (137)
T ss_dssp CTTCCCHHHHHHHHTC-HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHH
Confidence 5789999999999986 678888889999999999999999999999999999999999999999999999999999999
Q ss_pred hc----------CCcChhHHhhcCCCCCchhh
Q 045501 321 VT----------RRKDYLEATKQGQETNKDQL 342 (381)
Q Consensus 321 ~~----------~~~~~~~~~~~g~t~~~~~~ 342 (381)
.+ +|++++..|..|.||+....
T Consensus 86 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 117 (137)
T 3c5r_A 86 NGHVDIVKLLLSYGASRNAVNIFGLRPVDYTD 117 (137)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCC
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence 88 58899999999999976543
No 124
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=1.9e-20 Score=145.06 Aligned_cols=99 Identities=17% Similarity=0.033 Sum_probs=89.2
Q ss_pred CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHHH
Q 045501 241 TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICRR 320 (381)
Q Consensus 241 n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 320 (381)
+..|.||||+|+..|+ .++++.|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~-~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGD-LDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTC-HHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCC-HHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 4578999999999987 678888888999999999999999999999999999999999999999999999999999999
Q ss_pred hc----------CCcChhHHhhcCCCCCch
Q 045501 321 VT----------RRKDYLEATKQGQETNKD 340 (381)
Q Consensus 321 ~~----------~~~~~~~~~~~g~t~~~~ 340 (381)
.+ +|++++..|..|.||+..
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 112 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEA 112 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 88 588888888888888644
No 125
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.82 E-value=4.5e-21 Score=146.64 Aligned_cols=92 Identities=17% Similarity=0.131 Sum_probs=79.5
Q ss_pred CCCCCeeeEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCccc
Q 045501 5 NPKETWLEAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLK 84 (381)
Q Consensus 5 ~~~~~~~Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~ 84 (381)
|.++.||||+|.|+|++|+|||+||||+|+||++ .... +.+.++++++|..+|+|+|||++.
T Consensus 25 r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~------------~~~~------i~l~~v~~~~f~~ll~fiYtg~~~ 86 (119)
T 3m5b_A 25 RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR------------RGQW------ALGEGISPSTFAQLLNFVYGESVE 86 (119)
T ss_dssp HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC------------CEEE------ECCSSCCHHHHHHHHHHHTTCCEE
T ss_pred HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc------------CCCE------EEeCCCCHHHHHHHHHHHcCCCcC
Confidence 4568999999999999999999999999999985 1123 344578899999999999999999
Q ss_pred CCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhh
Q 045501 85 APPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLR 134 (381)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~ 134 (381)
+...+ +.+++.+|.+|+++.+.+.|.+...
T Consensus 87 i~~~~--------------------v~~ll~aA~~l~i~~l~~~C~~~~~ 116 (119)
T 3m5b_A 87 LQPGE--------------------LRPLQEAARALGVQSLEEACWRARG 116 (119)
T ss_dssp ECGGG--------------------HHHHHHHHHHTTCHHHHHHHHHHC-
T ss_pred cCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 87777 8999999999999999999987643
No 126
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.82 E-value=1.9e-20 Score=162.95 Aligned_cols=134 Identities=20% Similarity=0.130 Sum_probs=111.4
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 221 (381)
+.+|.||||+|+..|+.++++.+++ .. +++. .|..|+||||+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~~-----------------------------------~d~~g~t~L~~ 83 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DR--DVDA-----------------------------------VDENGRTALLF 83 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TC--CTTC-----------------------------------BCTTSCBHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CC--CCCC-----------------------------------cCCCCCCHHHH
Confidence 4568899999999999998888877 33 2221 37789999999
Q ss_pred HHhcCCHHHHHHHHhCC-CCC----CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHH
Q 045501 222 ALDTDDFELLTLLLDVS-NVT----LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVT 296 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~g-~in----~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~ 296 (381)
|+..|+.+++++|++.| ++| ..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..++
T Consensus 84 A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~------ 156 (244)
T 3ui2_A 84 VAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR-PEVVEALVELGADIEVEDERGLTALELAREILK------ 156 (244)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT------
T ss_pred HHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh------
Confidence 99999999999999999 664 569999999999986 789999999999999999999999999986332
Q ss_pred HHhCCCCCcccCCCCCCHHHHHHHhcCCcChhHHh
Q 045501 297 LLSKGACASETTSDWQTAVAICRRVTRRKDYLEAT 331 (381)
Q Consensus 297 Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~~~~ 331 (381)
...|.|||++|+..++...+..+.
T Consensus 157 -----------~~~~~~~l~~a~~~g~~~iv~~L~ 180 (244)
T 3ui2_A 157 -----------TTPKGNPMQFGRRIGLEKVINVLE 180 (244)
T ss_dssp -----------TCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred -----------ccCCCCHHHHHHHcChHHHHHHHH
Confidence 257899999999987644444433
No 127
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.82 E-value=3.2e-20 Score=154.26 Aligned_cols=131 Identities=20% Similarity=0.134 Sum_probs=109.9
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHH
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHK 221 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 221 (381)
+..|.||||.|+..|..++++.+++ .. +++. .|..|+||||+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~~-----------------------------------~d~~g~t~L~~ 82 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DR--DVDA-----------------------------------VDENGRTALLF 82 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TS--CTTC-----------------------------------CCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cC--CCCC-----------------------------------cCCCCCCHHHH
Confidence 4678899999999999998888887 33 2221 36789999999
Q ss_pred HHhcCCHHHHHHHHhCC-CCC----CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHH
Q 045501 222 ALDTDDFELLTLLLDVS-NVT----LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVT 296 (381)
Q Consensus 222 A~~~~~~~~v~~Ll~~g-~in----~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~ 296 (381)
|+..|+.+++++|++.| ++| ..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..++.
T Consensus 83 A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~-~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~----- 156 (183)
T 3deo_A 83 VAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR-PEVVEALVELGADIEVEDERGLTALELAREILKT----- 156 (183)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTC-HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----
T ss_pred HHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCc-HHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----
Confidence 99999999999999999 663 679999999999986 7888999999999999999999999999985433
Q ss_pred HHhCCCCCcccCCCCCCHHHHHHHhcCCcChh
Q 045501 297 LLSKGACASETTSDWQTAVAICRRVTRRKDYL 328 (381)
Q Consensus 297 Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~~~ 328 (381)
..+.+||++|+..++...++
T Consensus 157 ------------~~~~~~l~~a~~~~~~~i~~ 176 (183)
T 3deo_A 157 ------------TPKGNPMQFGRRIGLEKVIN 176 (183)
T ss_dssp ------------CCCCSHHHHHHHHHHHHHHH
T ss_pred ------------cccccHHHHHHHcCHHHHHH
Confidence 46789999999876544433
No 128
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=9.1e-20 Score=175.15 Aligned_cols=137 Identities=17% Similarity=0.111 Sum_probs=108.6
Q ss_pred hhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHh-
Q 045501 146 IPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALD- 224 (381)
Q Consensus 146 ~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~- 224 (381)
.+.|+.|+..|..+.++.+++.++ +++..... .+ .+..|.||||+|+.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~--~~n~~~~~----------------------------~~-~~~~g~t~Lh~A~~~ 181 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQ--DFGQPLPG----------------------------PD-AQAPEELVLHLAVKV 181 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTC--CSSSCBCC----------------------------SS-SCCSCBCHHHHHHHT
T ss_pred HHHHHHHHhccCHHHHHHHHhhcc--cccCCCCC----------------------------cc-cccccchHHHHHHHh
Confidence 367999999999999999998865 33322110 00 36889999999976
Q ss_pred --cCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHH
Q 045501 225 --TDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLL 298 (381)
Q Consensus 225 --~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll 298 (381)
.|+.+++++|+++| ++| ..|+||||+|+..|+ .+++++|+++|+|++.+|..|+||||+|+..|+.+++++|+
T Consensus 182 a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~-~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll 260 (497)
T 3lvq_E 182 ANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQ-PDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLE 260 (497)
T ss_dssp CCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTC-HHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred cccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 89999999999999 765 789999999999986 78999999999999999999999999999999999999999
Q ss_pred hCCCCCcccCCCCCCH
Q 045501 299 SKGACASETTSDWQTA 314 (381)
Q Consensus 299 ~~ga~~~~~d~~g~tp 314 (381)
++|++++....++.++
T Consensus 261 ~~ga~~~~~~~h~~~~ 276 (497)
T 3lvq_E 261 QAQAGTFAFPLHVDYS 276 (497)
T ss_dssp HTCC------------
T ss_pred HhCCCCCCCcceeecc
Confidence 9999998754443333
No 129
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=3e-20 Score=142.00 Aligned_cols=98 Identities=23% Similarity=0.232 Sum_probs=89.4
Q ss_pred CCCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHHH
Q 045501 240 VTLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAICR 319 (381)
Q Consensus 240 in~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 319 (381)
.|..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGH-AEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTC-HHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 35789999999999986 77889999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhc----------CCcChhHHhhcCCCCC
Q 045501 320 RVT----------RRKDYLEATKQGQETN 338 (381)
Q Consensus 320 ~~~----------~~~~~~~~~~~g~t~~ 338 (381)
..+ +|++++..+..|.+|.
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 987 6899999998888875
No 130
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=4.6e-19 Score=162.63 Aligned_cols=143 Identities=17% Similarity=0.126 Sum_probs=106.9
Q ss_pred CchhHHHHHHHc-CcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHH
Q 045501 144 NVIPILVAALHC-QLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKA 222 (381)
Q Consensus 144 ~~~t~L~~A~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 222 (381)
.+.++||.|+.. +..++++.++..++ +++..+ .+..|.||||+|
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Ga--dvn~~~---------------------------------~~~~g~TpLh~A 242 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGA--DVNWVN---------------------------------GGQDNATPLIQA 242 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTC--CTTCCC---------------------------------TTTTCCCHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCC--CCCccc---------------------------------cccCCCCHHHHH
Confidence 456899999999 99999999888755 333211 137899999999
Q ss_pred HhcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHH
Q 045501 223 LDTDDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLL 298 (381)
Q Consensus 223 ~~~~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll 298 (381)
+..|+.+++++|+++| ++| ..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 243 a~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~-~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 243 TAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGH-TGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCc-HHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 9999999999999999 664 789999999999986 78999999999999999999999999999999999999999
Q ss_pred hCC---CCCcccCCCCCCHHHHHHHhc
Q 045501 299 SKG---ACASETTSDWQTAVAICRRVT 322 (381)
Q Consensus 299 ~~g---a~~~~~d~~g~tpL~~A~~~~ 322 (381)
.+| ++....+..+.|+++++....
T Consensus 322 ~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 322 LAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHC-----------------------
T ss_pred HcCCCcccccccCCCCCCHHHHHHHHH
Confidence 876 344456678889998876653
No 131
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.79 E-value=1e-18 Score=154.85 Aligned_cols=127 Identities=17% Similarity=0.136 Sum_probs=105.8
Q ss_pred hhHHHHHHHcCcHHHHHHHHHhhhccCCCcccccccCcHHHHHHHHhhhhhhccccccCCCCCCCCCCCCccHHHHHHhc
Q 045501 146 IPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANTKEVDPLREKTVRRIHKALDT 225 (381)
Q Consensus 146 ~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 225 (381)
.++|+.|+..+....+..++..+. ++... ..++..+..|.||||+|+..
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~--~~~~~-----------------------------~~l~~~~~~g~t~Lh~A~~~ 179 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGV--DLTEK-----------------------------IPLANGHEPDETALHLAVRS 179 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTC--CTTSB-----------------------------CCCSSCSSTTCBHHHHHHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhc--chhhh-----------------------------ccccccccCCCCcchHHHHh
Confidence 467888888888777777666643 11111 00112367899999999999
Q ss_pred ---CCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHH
Q 045501 226 ---DDFELLTLLLDVS-NVT---LDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLL 298 (381)
Q Consensus 226 ---~~~~~v~~Ll~~g-~in---~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll 298 (381)
|+.+++++|+++| ++| ..|+||||+|+..|+ .+++++|+++|+|++.+|..|+||||+|+..|+.+++++|+
T Consensus 180 ~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~-~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 258 (278)
T 1dcq_A 180 VDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN-AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLT 258 (278)
T ss_dssp CCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHH
Confidence 8999999999999 664 789999999999986 78999999999999999999999999999999999999999
Q ss_pred hCCCCC
Q 045501 299 SKGACA 304 (381)
Q Consensus 299 ~~ga~~ 304 (381)
++|++.
T Consensus 259 ~~ga~~ 264 (278)
T 1dcq_A 259 QALSGR 264 (278)
T ss_dssp HHHTTC
T ss_pred HcCCCC
Confidence 999864
No 132
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=7e-19 Score=133.26 Aligned_cols=84 Identities=29% Similarity=0.187 Sum_probs=62.1
Q ss_pred CCCCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHHHcCChHHHHHHHhCCCCCcccCCCCCCHHHHH
Q 045501 239 NVTLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAARRNEPEVMVTLLSKGACASETTSDWQTAVAIC 318 (381)
Q Consensus 239 ~in~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A 318 (381)
+++..|.||||+|+..|+ .+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQ-DDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCC-HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 345677777887777765 5566666677777777777788888888888888888888888888877777788888887
Q ss_pred HHhcC
Q 045501 319 RRVTR 323 (381)
Q Consensus 319 ~~~~~ 323 (381)
+..++
T Consensus 98 ~~~~~ 102 (110)
T 2zgd_A 98 IDNGN 102 (110)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 77654
No 133
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.77 E-value=1.2e-20 Score=173.78 Aligned_cols=120 Identities=12% Similarity=-0.076 Sum_probs=100.8
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHhCC-------CCCCCCchHHHHHHHcCChHHHHHHHhccCCCC---cccCCCCCcH
Q 045501 212 REKTVRRIHKALDTDDFELLTLLLDVS-------NVTLDDAYALHYAAAYCNPKVFKEVLNMDLAGL---NLKDARGRTV 281 (381)
Q Consensus 212 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-------~in~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~i---n~~d~~g~Tp 281 (381)
+..+.||||+|+..|+.++|++|++.| +++..|.||||+|+..|+ .+++++|+++|+++ +..+.+ +||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~-~eiv~~Ll~~gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGH-LHVLNRLCELAPTEIMAMIQAEN-YHA 166 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTC-HHHHHHHHHSCTTTHHHHHSHHH-HHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCC-HHHHHHHHhCCCCccccccCCCC-CCH
Confidence 345679999999999999999999998 234678999999999987 78999999999863 333333 999
Q ss_pred HHHHHHcCChHHHHHHHhCCCCCcc--cCCCCCCHHHHHH-HhcCCcChhHHhhc
Q 045501 282 LHVAARRNEPEVMVTLLSKGACASE--TTSDWQTAVAICR-RVTRRKDYLEATKQ 333 (381)
Q Consensus 282 Lh~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~tpL~~A~-~~~~~~~~~~~~~~ 333 (381)
||+|+..|+.+++++|+++|++++. +|..|.||||+|+ ..|+...+..+...
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ 221 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC 221 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC
Confidence 9999999999999999999999987 8999999999999 99876666655543
No 134
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=6e-18 Score=128.10 Aligned_cols=86 Identities=15% Similarity=0.198 Sum_probs=79.1
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCChHHHHHHHhccCCCCcccCCCCCcHHHHHH
Q 045501 211 LREKTVRRIHKALDTDDFELLTLLLDVS-NV---TLDDAYALHYAAAYCNPKVFKEVLNMDLAGLNLKDARGRTVLHVAA 286 (381)
Q Consensus 211 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~i---n~~g~t~Lh~A~~~g~~~~~~~lL~~~ga~in~~d~~g~TpLh~A~ 286 (381)
.+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~-~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGH-LEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 5789999999999999999999999999 65 4789999999999986 67888999999999999999999999999
Q ss_pred HcCChHHHHHH
Q 045501 287 RRNEPEVMVTL 297 (381)
Q Consensus 287 ~~~~~~~v~~L 297 (381)
..|+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999987
No 135
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.27 E-value=1.8e-11 Score=98.00 Aligned_cols=126 Identities=16% Similarity=0.144 Sum_probs=81.1
Q ss_pred EEEEE-cCeEeeehhhhhhhccHHHHHhhcc-CCC-CCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccCCCCC
Q 045501 13 AEIVV-EGKSVAVNRSVLSELSQFFRRLFNL-RND-GSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKAPPPE 89 (381)
Q Consensus 13 v~~~~-~~~~~~aHr~vLaa~s~~f~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~~~~~ 89 (381)
|+|+. +|+.|++||.| |+.|+|||+||.. +.. ++ .... +|+.+|+..++..+++|+|+++-...+..
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~---~~~~------Ipl~~V~~~iL~kViey~~~h~~~~~~~~ 72 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEG---DDDP------VPLPNVNAAILKKVIQWCTHHKDDPPPPE 72 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS---------C------EECTTSCHHHHHHHHHHHHHTTTCCC---
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccc---cCCC------cCCCCccHHHHHHHHHHHHHcCcCCCCcc
Confidence 67764 79999999999 8999999999987 422 11 1123 56667899999999999999874432211
Q ss_pred cccc----cccCCCC-cC-ChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHH
Q 045501 90 VSAC----VDDACSH-DA-CPPAINYAIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALH 154 (381)
Q Consensus 90 ~~~~----~~~~~~~-~~-~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~ 154 (381)
.... ....+.+ .. ..-..+.+.+++.+|.++++..|..++.+..++. -.|.||-.+-..
T Consensus 73 ~~~~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~------i~gkt~eeir~~ 137 (159)
T 2ast_A 73 DDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM------IKGKTPEEIRKT 137 (159)
T ss_dssp --------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------HSSCCHHHHHHH
T ss_pred cccccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH------HcCCCHHHHHHH
Confidence 0000 0000000 00 0112345899999999999999999998887665 445565544333
No 136
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.08 E-value=2.4e-10 Score=83.28 Aligned_cols=80 Identities=15% Similarity=0.254 Sum_probs=57.4
Q ss_pred EEEEE-cCeEeeehhhhhhhccHHHHHhhccCCCCCCCC-CCCeeeecccccCCCCCHHHHHHHHhhHh-----c---Cc
Q 045501 13 AEIVV-EGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSE-GKPKYLLTDLVPHGKVGYEAFNDILHRLY-----T---GK 82 (381)
Q Consensus 13 v~~~~-~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~L~~lY-----t---g~ 82 (381)
|+|+. +|++|++||.| |+.|+|||+||..... +.| .... +|+.+|+..++..+++|+| + +.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~--~~E~~~~~------I~l~~V~~~iL~kViey~~~h~~~~~~~~~ 74 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQ--FAENETNE------VNFREIPSHVLSKVCMYFTYKVRYTNSSTE 74 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC----------CE------EECTTSCHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCC--ccccCCCc------eECCCCCHHHHHHHHHHHHHhcccCCCcCC
Confidence 55664 69999999999 9999999999986311 111 1223 5556788999999999999 5 44
Q ss_pred cc---CCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcC
Q 045501 83 LK---APPPEVSACVDDACSHDACPPAINYAIELMYASAAFQ 121 (381)
Q Consensus 83 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~ 121 (381)
+. +.+.+ +.+++.+|.+++
T Consensus 75 i~~~~i~~~~--------------------l~eLl~AAnyL~ 96 (97)
T 4ajy_C 75 IPEFPIAPEI--------------------ALELLMAANFLD 96 (97)
T ss_dssp CCCCCCCGGG--------------------HHHHHHHHHHHT
T ss_pred CCcCcCCHHH--------------------HHHHHHHHhhhC
Confidence 43 22222 899999999875
No 137
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.84 E-value=1.2e-08 Score=79.59 Aligned_cols=124 Identities=16% Similarity=0.142 Sum_probs=81.3
Q ss_pred EEEEE-cCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccCCCCCcc
Q 045501 13 AEIVV-EGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKAPPPEVS 91 (381)
Q Consensus 13 v~~~~-~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~~~~~~~ 91 (381)
|+|+. +|++|.+||.+ |..|+|||.||.... .+.+|+.+|+..++..+++|+|+.+-...+....
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-------------~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~ 69 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-------------MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDD 69 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-------------CSSEECTTCCHHHHHHHHHHHHHHTTCC------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-------------CCceecCCcCHHHHHHHHHHHHHhccCCCccccc
Confidence 67776 79999999998 899999999998641 1126666899999999999999876432111100
Q ss_pred cc----cccCC-CCcC-ChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHHHcC
Q 045501 92 AC----VDDAC-SHDA-CPPAINYAIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAALHCQ 156 (381)
Q Consensus 92 ~~----~~~~~-~~~~-~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~ 156 (381)
.+ ..... |... ..-..+.+.+++.+|.++++..|..++.+..++. -.|.||=.+-..+|
T Consensus 70 ~~~~~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~------ikgkt~eeiR~~f~ 134 (141)
T 1fs1_B 70 ENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM------IKGKTPEEIRKTFN 134 (141)
T ss_dssp -----------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------HTTCCHHHHHHHTC
T ss_pred cccccchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH------HcCCCHHHHHHHcC
Confidence 00 00000 0000 0112345889999999999999999998887765 44556655544443
No 138
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.61 E-value=1.9e-08 Score=80.26 Aligned_cols=122 Identities=16% Similarity=0.044 Sum_probs=53.9
Q ss_pred EEEEE-cCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccCCCCCcc
Q 045501 13 AEIVV-EGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKAPPPEVS 91 (381)
Q Consensus 13 v~~~~-~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~~~~~~~ 91 (381)
|+|+. +|+.|.+||.+ |..|+||+.||..... .+.+|+.+|+..++..+++|+|+.+-...+....
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~------------~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~ 72 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV------------DNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEA 72 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC------------------------CCTTSCHHHHHHHHHC--------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC------------CCceeCCcCcHHHHHHHHHHHHHcccCCCccccc
Confidence 66664 79999999998 8999999999976421 1136777899999999999999887442111100
Q ss_pred -----cccccCC-CCcC-ChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHHHH
Q 045501 92 -----ACVDDAC-SHDA-CPPAINYAIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVAAL 153 (381)
Q Consensus 92 -----~~~~~~~-~~~~-~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~A~ 153 (381)
....... |... ..-....+.+++.+|.++++..|..++.+..++. -.|.||=.+-.
T Consensus 73 ~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~------ikgkt~eeir~ 135 (160)
T 2p1m_A 73 VEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADM------IKGKTPEEIRT 135 (160)
T ss_dssp ----------------------------CHHHHHHTTCHHHHHHHHHHHHHT------TTTCCHHHHHH
T ss_pred ccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH------HcCCCHHHHHH
Confidence 0000011 1000 0111234789999999999999999998887665 44556544433
No 139
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.87 E-value=2.8e-05 Score=55.92 Aligned_cols=92 Identities=14% Similarity=0.160 Sum_probs=58.3
Q ss_pred EEEEE-cCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccC-CCCCc
Q 045501 13 AEIVV-EGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKA-PPPEV 90 (381)
Q Consensus 13 v~~~~-~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~-~~~~~ 90 (381)
|+|+. +|.+|.++|.+ |..|.+++.||..... ..+.. .+.+|+.+|+..++..+++|+|.-+-.. .....
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~--~~e~~-----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i 74 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQ--FAENE-----TNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEI 74 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCC--ccccc-----CCceeCCCCCHHHHHHHHHHHHHccccCCCcccC
Confidence 56665 79999999997 8999999999985321 01111 0125666899999999999999654211 11110
Q ss_pred ccccccCCCCcCChhhHHHHHHHHHHHHHcCH
Q 045501 91 SACVDDACSHDACPPAINYAIELMYASAAFQM 122 (381)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~ 122 (381)
. -|.. ....+.+++.+|.++++
T Consensus 75 ~------~w~v----d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 75 P------EFPI----APEIALELLMAANFLDC 96 (96)
T ss_dssp C------CCCC----CTTTHHHHHHHHHHHTC
T ss_pred C------Cccc----CHHHHHHHHHHHHHhCc
Confidence 0 1111 11238899999998763
No 140
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.86 E-value=0.00014 Score=53.50 Aligned_cols=96 Identities=19% Similarity=0.222 Sum_probs=68.3
Q ss_pred eEEEEEcCeEeeehhhhhhhcc-HHHHHhhccCCCCC-CCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccCCCCC
Q 045501 12 EAEIVVEGKSVAVNRSVLSELS-QFFRRLFNLRNDGS-VSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKAPPPE 89 (381)
Q Consensus 12 Dv~~~~~~~~~~aHr~vLaa~s-~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~~~~~ 89 (381)
=|+|.|||+.|...+..|+... .+|.+||.+...-. ..+...++-+ |-+++.|..||+|+.+|++..+..-
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-------DRdp~~F~~IL~~lr~g~l~~p~~~ 79 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-------DRDPTYFGPVLNYLRHGKLVINKDL 79 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-------CSCHHHHHHHHHHHHHSCCCCCTTS
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-------cCChHHHHHHHHHhCCCeeCCCCCC
Confidence 3678999999999999998765 47889987531100 0001111111 4578899999999999998764332
Q ss_pred cccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHh
Q 045501 90 VSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWL 133 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~ 133 (381)
+ ...++.-|.+|++.++++.|.+..
T Consensus 80 -~------------------~~~l~~Ea~fy~l~~L~~~l~~~i 104 (107)
T 3drz_A 80 -A------------------EEGVLEEAEFYNITSLIKLVKDKI 104 (107)
T ss_dssp -C------------------HHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred -C------------------HHHHHHHHHHCCCHHHHHHHHHHH
Confidence 1 467889999999999998887653
No 141
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.84 E-value=2.4e-05 Score=56.59 Aligned_cols=93 Identities=14% Similarity=0.160 Sum_probs=60.7
Q ss_pred EEEEE-cCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccCCCCCcc
Q 045501 13 AEIVV-EGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKAPPPEVS 91 (381)
Q Consensus 13 v~~~~-~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~~~~~~~ 91 (381)
|+|+. +|++|.++|.+ |..|.++|.||..+. + +.... +|+.+|+..++..+++|+|.-+-...+..
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e---~~~~~------Iplp~V~~~iL~kVieyc~~h~~~~~~~~-- 72 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-R---ESKGR------IELKQFDSHILEKAVEYLNYNLKYSGVSE-- 72 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-T---TCTTE------EEETTSCHHHHHHHHHHHHHHHHHHHHCS--
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-c---cCCCc------eecCCcCHHHHHHHHHHHHHhcccCCCcc--
Confidence 67776 79999999997 899999999998742 1 12123 55567888999999999996542211100
Q ss_pred cccccCCCCcCChhhHHHHHHHHHHHHHcCH
Q 045501 92 ACVDDACSHDACPPAINYAIELMYASAAFQM 122 (381)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~ 122 (381)
.......+ .-....+.+++.+|.++++
T Consensus 73 -~~~~i~~w---~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 73 -DDDEIPEF---EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp -SCSSCCCC---CCCHHHHHHHHHHHHHHCC
T ss_pred -ccccCCCc---cCCHHHHHHHHHHHHHhCc
Confidence 00011111 1123458899999998763
No 142
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.66 E-value=0.00023 Score=56.91 Aligned_cols=127 Identities=14% Similarity=0.102 Sum_probs=77.0
Q ss_pred eEEEEE-cCeEeeehhhhhhhccHHHHHhhccCCCCCCC-CCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccCCCCC
Q 045501 12 EAEIVV-EGKSVAVNRSVLSELSQFFRRLFNLRNDGSVS-EGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKAPPPE 89 (381)
Q Consensus 12 Dv~~~~-~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~~~~~ 89 (381)
-|+|+. +|+.|.++|.+ |..|.+++.|+.....+... +... .+|+.+|+..++..|++|++.-+-...+..
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~------~IplpnV~s~iL~kVieyc~~h~~~~~~~~ 80 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEI------VMPVPNVRSSVLQKVIEWAEHHRDSNFPDE 80 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------C------EEECTTCCHHHHHHHHHHHHHTTTCCCCC-
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCC------ceeeCCCCHHHHHHHHHHHHHcccCCCccc
Confidence 466664 69999999997 78999999999754221000 0112 356667899999999999997654332210
Q ss_pred --cc-cccccCCCC-cC-ChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhhHHHHhhhcCchhHHHH
Q 045501 90 --VS-ACVDDACSH-DA-CPPAINYAIELMYASAAFQMKELVFLLQLWLRSMVEKALVENVIPILVA 151 (381)
Q Consensus 90 --~~-~~~~~~~~~-~~-~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~L~~ 151 (381)
.. ........+ .. ..-....+.+++.+|.++++..|..++++..++. -.|.||=.+
T Consensus 81 ~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~------ikgktpeei 141 (169)
T 3v7d_A 81 DDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEM------IRGRSPEEI 141 (169)
T ss_dssp -------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------HTTCCHHHH
T ss_pred ccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH------HcCCCHHHH
Confidence 00 000000000 00 0011245789999999999999999988877665 345565443
No 143
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.70 E-value=0.011 Score=47.97 Aligned_cols=107 Identities=20% Similarity=0.197 Sum_probs=71.8
Q ss_pred CCCeeeEEEEEcCeEeeehhhhhhhcc-HHHHHhhccCCCC-CCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCccc
Q 045501 7 KETWLEAEIVVEGKSVAVNRSVLSELS-QFFRRLFNLRNDG-SVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLK 84 (381)
Q Consensus 7 ~~~~~Dv~~~~~~~~~~aHr~vLaa~s-~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~ 84 (381)
...-.=|+|.|||+.|...+..|.... .+|..||.+...- ...+...++-+ |-+++.|..||+|+.+|++.
T Consensus 8 g~~~~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-------DRDP~~F~~ILnyLRtG~L~ 80 (202)
T 3drx_A 8 GSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-------DRDPTYFGPVLNYLRHGKLV 80 (202)
T ss_dssp SCCCCEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-------CSCSTTHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-------cCChHHHHHHHHHhcCCccC
Confidence 333334668899999999999997543 3788888754210 00111122211 23455899999999999987
Q ss_pred CCCCCcccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHHHHHHHHhhhHHHH
Q 045501 85 APPPEVSACVDDACSHDACPPAINYAIELMYASAAFQMKELVFLLQLWLRSMVEK 139 (381)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~l~~~~~~~~~~ 139 (381)
++..- + ...++.-|.+|++.++++.|.+....-...
T Consensus 81 lP~~~-~------------------~~~l~eEA~FygL~~Lv~~l~~~i~ere~~ 116 (202)
T 3drx_A 81 INKDL-A------------------EEGVLEEAEFYNITSLIKLVKDKIRERDSK 116 (202)
T ss_dssp CCTTS-C------------------HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCC-C------------------HHHHHHHHHHCCcHHHHHHHHHHHHHHhcc
Confidence 64432 1 456888999999999999988777655444
No 144
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=96.56 E-value=0.0026 Score=46.86 Aligned_cols=93 Identities=15% Similarity=0.184 Sum_probs=58.7
Q ss_pred eEEEE-EcCeEeeehhhhhhhccHHHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccC-CCCC
Q 045501 12 EAEIV-VEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKA-PPPE 89 (381)
Q Consensus 12 Dv~~~-~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~-~~~~ 89 (381)
-|+|+ .+|.+|.+.|.+ |..|..++.|+..... ..+.. ...+|+.+|+..++..+++|++.-+-.. ....
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~--~~e~~-----~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~ 89 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQ--FAENE-----TNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTE 89 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC---------------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCC--ccccc-----CCceeCCCCCHHHHHHHHHHHHHhhhccCCcCC
Confidence 36666 479999999984 7899999999975321 11111 1136666899999999999998654221 1111
Q ss_pred cccccccCCCCcCChhhHHHHHHHHHHHHHcCH
Q 045501 90 VSACVDDACSHDACPPAINYAIELMYASAAFQM 122 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~ 122 (381)
. .-| .-....+.+++.+|.++++
T Consensus 90 i------~~w----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 90 I------PEF----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp C------CCC----CCCHHHHHHHHHHHHHHTC
T ss_pred C------CCc----ccCHHHHHHHHHHHHHhCc
Confidence 0 012 1123458899999998763
No 145
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=92.48 E-value=0.06 Score=39.71 Aligned_cols=85 Identities=15% Similarity=0.138 Sum_probs=53.4
Q ss_pred EEEEEcCeEeeehhhhhhhccH-HHHHhhccCCCCCCCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccCCCCCcc
Q 045501 13 AEIVVEGKSVAVNRSVLSELSQ-FFRRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKAPPPEVS 91 (381)
Q Consensus 13 v~~~~~~~~~~aHr~vLaa~s~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~~~~~~~ 91 (381)
|+|.|||+.|...+..|..... .+.+||..... ......++-+ |-.+..|..||+|+.+|++..+..- +
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~--~~~~~g~~Fi-------DRdp~~F~~ILnylR~G~l~~p~~~-~ 76 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLN--YDPVLNEYFF-------DRHPGVFAQIINYYRSGKLHYPTDV-C 76 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTT--EETTTTEEEE-------CSCTTTHHHHHHHHHHSCBCCCSSS-C
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCC--CCCCCCcEEE-------ecChHHHHHHHHHhcCCCCCCCCcc-c
Confidence 7789999999999999975432 23344432110 0111122211 2355689999999999998765432 1
Q ss_pred cccccCCCCcCChhhHHHHHHHHHHHHHcCHHHH
Q 045501 92 ACVDDACSHDACPPAINYAIELMYASAAFQMKEL 125 (381)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l 125 (381)
...++.-|.+|++.+.
T Consensus 77 ------------------~~~~~~Ea~fy~i~~~ 92 (115)
T 3kvt_A 77 ------------------GPLFEEELEFWGLDSN 92 (115)
T ss_dssp ------------------HHHHHHHHHHHTCCGG
T ss_pred ------------------HHHHHHHHHHhCCChH
Confidence 4567778888887653
No 146
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=91.22 E-value=0.24 Score=36.98 Aligned_cols=85 Identities=20% Similarity=0.203 Sum_probs=53.9
Q ss_pred eEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCC-CCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccCCCCCc
Q 045501 12 EAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGS-VSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKAPPPEV 90 (381)
Q Consensus 12 Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~~~~~~ 90 (381)
=|+|.|||+.|..-+..|.... ..||....... ..+...++- + |=+++.|..||+|+.+|++..+...
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p---~S~L~~~~~~~~~~~~~g~~F------i-DRdp~~F~~ILnflR~G~l~~p~~~- 82 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYF------F-DRDPEVFRCVLNFYRTGKLHYPRYE- 82 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTST---TSSTTSSGGGGTBCSSSCSEE------E-CSCHHHHHHHHHHHHHSCBCCCTTS-
T ss_pred EEEEEeCCEEEEEeHHHHhcCC---CceecccCCcccccCCCCcEE------E-cCChHHHHHHHHHHhcCCCCCCCCc-
Confidence 3678899999999999996432 23343210000 000001111 1 3478899999999999988754332
Q ss_pred ccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHH
Q 045501 91 SACVDDACSHDACPPAINYAIELMYASAAFQMKEL 125 (381)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l 125 (381)
+ ...++.-|.+|++..+
T Consensus 83 ~------------------~~~l~~Ea~fy~i~~l 99 (124)
T 1s1g_A 83 C------------------ISAYDDELAFYGILPE 99 (124)
T ss_dssp C------------------HHHHHHHHHHTTCCGG
T ss_pred C------------------HHHHHHHHHHcCCChH
Confidence 1 5778888999999876
No 147
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=89.14 E-value=0.37 Score=36.76 Aligned_cols=85 Identities=20% Similarity=0.211 Sum_probs=53.7
Q ss_pred eEEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCC-CCCCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccCCCCCc
Q 045501 12 EAEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGS-VSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKAPPPEV 90 (381)
Q Consensus 12 Dv~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~~~~~~ 90 (381)
=|+|.|||+.|...+..|.... ..||....... ..+...++-+ |=+++.|..||+|+-+|++......
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-------DRdp~~F~~ILnflR~G~l~~p~~~- 104 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-------DRDPEVFRCVLNFYRTGKLHYPRYE- 104 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-------CSCHHHHHHHHHHHHHSSBCCCTTS-
T ss_pred EEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-------eCCcHHHHHHHHHHhcCCcCCCCCc-
Confidence 4678899999999999996432 23443310000 0001111111 3478899999999999988754332
Q ss_pred ccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHH
Q 045501 91 SACVDDACSHDACPPAINYAIELMYASAAFQMKEL 125 (381)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l 125 (381)
+ ...++.-|.+|++..+
T Consensus 105 ~------------------~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 105 C------------------ISAYDDELAFYGILPE 121 (140)
T ss_dssp C------------------HHHHHHHHHHHTCCGG
T ss_pred C------------------HHHHHHHHHHcCCChH
Confidence 1 5678888888888765
No 148
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=87.11 E-value=0.68 Score=33.34 Aligned_cols=82 Identities=20% Similarity=0.191 Sum_probs=52.2
Q ss_pred EEEEEcCeEeeehhhhhhhccHHHHHhhccCCCCCCC---CCCCeeeecccccCCCCCHHHHHHHHhhHhcCcccCCCCC
Q 045501 13 AEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDGSVS---EGKPKYLLTDLVPHGKVGYEAFNDILHRLYTGKLKAPPPE 89 (381)
Q Consensus 13 v~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYtg~~~~~~~~ 89 (381)
|+|.|||+.|...+..|.... ..||... ++.. +...++-+ |=+++.|..||+|+-+|++..++..
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p---~s~L~~~--~~~~~~~~~~~~~Fi-------DRdp~~F~~ILnflR~g~l~~p~~~ 69 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYP---DTLLGSS--ERDFFYHPETQQYFF-------DRDPDIFRHILNFYRTGKLHYPRHE 69 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSC---SSSTTSG--GGGGGEEGGGTEEEE-------CSCTTTHHHHHHHHHHSCBCCCTTS
T ss_pred EEEEECCEEEEEeHHHHhcCC---Ccccccc--CCcccccCCCCcEEE-------eCCcHHHHHHHHHHhcCCCCCCCCc
Confidence 789999999999999996432 1233321 0000 00011111 2356699999999999988654332
Q ss_pred cccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHH
Q 045501 90 VSACVDDACSHDACPPAINYAIELMYASAAFQMKEL 125 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l 125 (381)
+ ...+..-|.+|++..+
T Consensus 70 -~------------------~~~l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 70 -C------------------ISAYDEELAFFGLIPE 86 (105)
T ss_dssp -C------------------HHHHHHHHHHHTCCSC
T ss_pred -C------------------HHHHHHHHHHcCCCHH
Confidence 1 5678888889988765
No 149
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=86.37 E-value=3.7 Score=29.11 Aligned_cols=85 Identities=15% Similarity=0.176 Sum_probs=52.5
Q ss_pred EEEEEcCeEeeehhhhhhhccHHHHHhhccCCCC--CCCCCCCeeeecccccCCCCCHHHHHHHHhhHhc-CcccCCCCC
Q 045501 13 AEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDG--SVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYT-GKLKAPPPE 89 (381)
Q Consensus 13 v~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYt-g~~~~~~~~ 89 (381)
|+|.|||+.|...+..|... -..|+...... .......++=+ |-+++.|..||+|+.+ |++..++..
T Consensus 3 v~LNVGG~~f~t~~~TL~~~---p~s~L~~~~~~~~~~~~~~~eyFi-------DRdp~~F~~ILnflR~~G~l~~p~~~ 72 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQF---PDTLLGNPQKRNRYYDPLRNEYFF-------DRNRPSFDAILYFYQSGGRLRRPVNV 72 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTS---TTSTTTCHHHHGGGEETTTTEEEE-------CSCSTTHHHHHHHHHTTSCCCCCTTS
T ss_pred EEEEECCEEEEeeHHHHhcC---CCccccchhccccccCCCceeEEE-------cCChHHHHHHHHHHhcCCcccCCCCC
Confidence 68999999999999999532 12222211000 00001112211 2345589999999999 888654332
Q ss_pred cccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHH
Q 045501 90 VSACVDDACSHDACPPAINYAIELMYASAAFQMKELV 126 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~ 126 (381)
+ ...++.-|.+|++.+.+
T Consensus 73 -~------------------~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 73 -P------------------LDVFSEEIKFYELGENA 90 (100)
T ss_dssp -C------------------HHHHHHHHHHTTCCHHH
T ss_pred -C------------------HHHHHHHHHHcCCCHHH
Confidence 1 56788889999988754
No 150
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.33 E-value=6.7 Score=27.93 Aligned_cols=52 Identities=17% Similarity=0.086 Sum_probs=37.3
Q ss_pred hcCchhHHHHHHHcCcHHHHHHHHHhhhccCCCccccc--ccCcHHHHHHHHhh
Q 045501 142 VENVIPILVAALHCQLNQLRSVCIQRIAKSNLDNVCLE--KELPDEVSSEIKSL 193 (381)
Q Consensus 142 ~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~ 193 (381)
.+||..++.+|..+++.+|.+.+..++.+++......+ ..+|.+....+++.
T Consensus 10 ~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~s 63 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISD 63 (105)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcC
Confidence 37999999999999999999999999887554443322 23455555555543
No 151
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=37.98 E-value=28 Score=32.75 Aligned_cols=85 Identities=14% Similarity=0.182 Sum_probs=50.6
Q ss_pred EEEEEcCeEeeehhhhhhhccHHHHHhhccCCCC--CCCCCCCeeeecccccCCCCCHHHHHHHHhhHhc-CcccCCCCC
Q 045501 13 AEIVVEGKSVAVNRSVLSELSQFFRRLFNLRNDG--SVSEGKPKYLLTDLVPHGKVGYEAFNDILHRLYT-GKLKAPPPE 89 (381)
Q Consensus 13 v~~~~~~~~~~aHr~vLaa~s~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~L~~lYt-g~~~~~~~~ 89 (381)
|+|.|||+.|...+..|... =..++...... .......++=+ |=.++.|..+|.|+.+ |++..+..-
T Consensus 54 v~lNVgG~~f~t~~~tL~~~---p~s~l~~~~~~~~~~~~~~~~~f~-------DR~~~~F~~IL~~~r~~g~l~~p~~~ 123 (514)
T 2r9r_B 54 VVINISGLRFETQLKTLAQF---PETLLGDPKKRMRYFDPLRNEYFF-------DRNRPSFDAILYYYQSGGRLRRPVNV 123 (514)
T ss_dssp EEEEETTEEEEEEHHHHTTS---TTSTTTCHHHHGGGEETTTTEEEE-------CSCHHHHHHHHHHHHHTSCCCCCTTS
T ss_pred EEEEeCCEEEEecHHHHhcC---CCCcccccccCCcccCCCCCCEEE-------cCChHHHHHHHHHHhcCCccccCCcc
Confidence 55789999999999988532 12222210000 00001111111 3477899999999999 988754332
Q ss_pred cccccccCCCCcCChhhHHHHHHHHHHHHHcCHHHHH
Q 045501 90 VSACVDDACSHDACPPAINYAIELMYASAAFQMKELV 126 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~ 126 (381)
+ ...+..-|.+|++.+.+
T Consensus 124 -~------------------~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 124 -P------------------LDIFSEEIRFYELGEEA 141 (514)
T ss_dssp -C------------------HHHHHHHHHHTTCCHHH
T ss_pred -c------------------HHHHHHHHHhcCCCHHH
Confidence 1 45667778888887654
Done!