BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045506
MSLLIFLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQK
SIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIASQFSDKNC
SLGKILKKAQGFCMSNCGFHGSNPQHNSAFIWVGNSVTPCPGQCAWPFHQPIY

High Scoring Gene Products

Symbol, full name Information P value
EXL2
AT5G64260
protein from Arabidopsis thaliana 3.7e-31
PHI-1
AT1G35140
protein from Arabidopsis thaliana 3.1e-28
EXL4
AT5G09440
protein from Arabidopsis thaliana 4.7e-25
EXL5
AT2G17230
protein from Arabidopsis thaliana 1.9e-17
EXO
AT4G08950
protein from Arabidopsis thaliana 4.1e-17
EXL7
AT2G35150
protein from Arabidopsis thaliana 2.8e-14
EXL6
AT3G02970
protein from Arabidopsis thaliana 1.8e-09
EXL3
AT5G51550
protein from Arabidopsis thaliana 5.9e-08

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045506
        (173 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2173428 - symbol:EXL2 "AT5G64260" species:3702...   185  3.7e-31   2
TAIR|locus:2203314 - symbol:PHI-1 "AT1G35140" species:370...   171  3.1e-28   2
TAIR|locus:2184792 - symbol:EXL4 "AT5G09440" species:3702...   176  4.7e-25   2
TAIR|locus:2059652 - symbol:EXL5 "AT2G17230" species:3702...   146  1.9e-17   2
TAIR|locus:2138753 - symbol:EXO "AT4G08950" species:3702 ...   210  4.1e-17   1
TAIR|locus:2063399 - symbol:EXL7 "AT2G35150" species:3702...   122  2.8e-14   2
TAIR|locus:2075482 - symbol:EXL6 "AT3G02970" species:3702...   105  1.8e-09   2
TAIR|locus:2153087 - symbol:EXL3 "AT5G51550" species:3702...   130  5.9e-08   1


>TAIR|locus:2173428 [details] [associations]
            symbol:EXL2 "AT5G64260" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005618 "cell wall" evidence=IDA] [GO:0009505
            "plant-type cell wall" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=IDA] [GO:0046685 "response to
            arsenic-containing substance" evidence=RCA] GO:GO:0005829
            GO:GO:0009506 GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009505 EMBL:AB008268 HOGENOM:HOG000239502 InterPro:IPR006766
            Pfam:PF04674 EMBL:AF326891 EMBL:AF339708 EMBL:AF380638
            EMBL:AY057739 EMBL:AY087652 IPI:IPI00531827 RefSeq:NP_201231.1
            UniGene:At.23633 UniGene:At.67053 UniGene:At.71435 IntAct:Q9FE06
            STRING:Q9FE06 PaxDb:Q9FE06 PRIDE:Q9FE06 EnsemblPlants:AT5G64260.1
            GeneID:836547 KEGG:ath:AT5G64260 TAIR:At5g64260 eggNOG:NOG244181
            InParanoid:Q9FE06 OMA:WATTARY PhylomeDB:Q9FE06
            ProtClustDB:CLSN2914830 ArrayExpress:Q9FE06 Genevestigator:Q9FE06
            Uniprot:Q9FE06
        Length = 305

 Score = 185 (70.2 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
 Identities = 44/122 (36%), Positives = 66/122 (54%)

Query:     6 FLLHLNFISSCLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIAD 65
             F + L    +  G     +L +  P+ M YH G LL+GN+ V+++WYG+F+P Q+S+I D
Sbjct:     7 FAIFLTLFFATAGF-SAAALVEEQPLVMKYHNGVLLKGNITVNLVWYGKFTPIQRSVIVD 65

Query:    66 FLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIASQFSDKNCSLGKI 125
             F+ SLN  K+   S      PSV+  W T + Y    G G + + +  Q   +N  LGK 
Sbjct:    66 FIHSLN-SKDVASS---AAVPSVASWWKTTEKYK---G-GSSTLVVGKQLLLENYPLGKS 117

Query:   126 LK 127
             LK
Sbjct:   118 LK 119

 Score = 177 (67.4 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
 Identities = 31/48 (64%), Positives = 36/48 (75%)

Query:   132 FCMSNCGFHGS---NPQ---HNSAFIWVGNSVTPCPGQCAWPFHQPIY 173
             FCMS CG HGS   NP+   + +A++WVGNS T CPG CAWPFHQPIY
Sbjct:   151 FCMSRCGTHGSSGSNPRRAANGAAYVWVGNSETQCPGYCAWPFHQPIY 198


>TAIR|locus:2203314 [details] [associations]
            symbol:PHI-1 "AT1G35140" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0009505 "plant-type cell
            wall" evidence=IDA] [GO:0040007 "growth" evidence=IMP] [GO:0001666
            "response to hypoxia" evidence=IEP] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0009612 "response to mechanical stimulus"
            evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
            GO:GO:0040007 GO:GO:0001666 GO:GO:0009505 EMBL:AC079605
            HOGENOM:HOG000239502 InterPro:IPR006766 Pfam:PF04674 EMBL:AY084831
            IPI:IPI00521508 PIR:H86471 RefSeq:NP_174746.1 UniGene:At.24168
            STRING:Q9C6E4 PaxDb:Q9C6E4 PRIDE:Q9C6E4 EnsemblPlants:AT1G35140.1
            GeneID:840399 KEGG:ath:AT1G35140 TAIR:At1g35140 eggNOG:NOG249218
            InParanoid:Q9C6E4 OMA:NIASMVA PhylomeDB:Q9C6E4
            ProtClustDB:CLSN2914348 Genevestigator:Q9C6E4 Uniprot:Q9C6E4
        Length = 309

 Score = 171 (65.3 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
 Identities = 29/49 (59%), Positives = 33/49 (67%)

Query:   130 QGFCMSNCGFHGSNPQHNS-----AFIWVGNSVTPCPGQCAWPFHQPIY 173
             QGFCM+ CG HG+           A+IWVGNS T CPGQCAWPFH P+Y
Sbjct:   154 QGFCMNRCGSHGTGSGSGKKGSRFAYIWVGNSETQCPGQCAWPFHAPVY 202

 Score = 166 (63.5 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
 Identities = 39/114 (34%), Positives = 63/114 (55%)

Query:    16 CLGARKLTSLYQPSPIAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKN 75
             CL AR  T   Q    +  YHKGALL G++ ++++WYG+F P+Q++I+ DF+ SL+  + 
Sbjct:    18 CLDAR--TDKTQDYT-SFQYHKGALLTGDVSINLIWYGKFKPSQRAIVTDFVASLSSSRR 74

Query:    76 QLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTR---VFIASQFSDKNCSLGKIL 126
                +      PSV+  W T++ Y +      TR   + +  Q  D+  S+GK L
Sbjct:    75 STMAQ----NPSVATWWKTVEKYYQFRKMTTTRGLSLSLGEQILDQGYSMGKSL 124


>TAIR|locus:2184792 [details] [associations]
            symbol:EXL4 "AT5G09440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0016020 "membrane" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] [GO:0050832 "defense
            response to fungus" evidence=IEP] GO:GO:0009506 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0016020 GO:GO:0050832 EMBL:AL391712
            HOGENOM:HOG000239502 InterPro:IPR006766 Pfam:PF04674 EMBL:AY065126
            EMBL:AY081560 EMBL:AY087813 IPI:IPI00529924 RefSeq:NP_196506.1
            UniGene:At.24839 PaxDb:Q9FY71 PRIDE:Q9FY71
            EnsemblPlants:AT5G09440.1 GeneID:830803 KEGG:ath:AT5G09440
            TAIR:At5g09440 eggNOG:NOG268525 InParanoid:Q9FY71 OMA:YLWAGNP
            PhylomeDB:Q9FY71 ProtClustDB:CLSN2916875 ArrayExpress:Q9FY71
            Genevestigator:Q9FY71 Uniprot:Q9FY71
        Length = 278

 Score = 176 (67.0 bits), Expect = 4.7e-25, Sum P(2) = 4.7e-25
 Identities = 30/46 (65%), Positives = 34/46 (73%)

Query:   130 QGFCMSNCGFHGSNPQH-NS-AFIWVGNSVTPCPGQCAWPFHQPIY 173
             +G CM+ CG HGS     NS A++WVGNS T CPG CAWPFHQPIY
Sbjct:   138 EGLCMNRCGTHGSKSSSVNSGAYVWVGNSETQCPGYCAWPFHQPIY 183

 Score = 125 (49.1 bits), Expect = 4.7e-25, Sum P(2) = 4.7e-25
 Identities = 30/87 (34%), Positives = 47/87 (54%)

Query:    41 LEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMK 100
             L GN+ ++++WYG+F+P Q+SII DF+ S++      G       PSV+  W T + Y  
Sbjct:    32 LNGNITLNLIWYGKFTPIQRSIIVDFIRSISSVTAAKG-------PSVASWWKTTEKYKT 84

Query:   101 KAGKGQTRVFIASQFSDKNCSLGKILK 127
                 G + + +  Q   +N  LGK LK
Sbjct:    85 ----GVSTLVVGKQLLLENYPLGKSLK 107


>TAIR|locus:2059652 [details] [associations]
            symbol:EXL5 "AT2G17230" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002685 EMBL:AC007127
            ProtClustDB:CLSN2687409 InterPro:IPR006766 Pfam:PF04674
            EMBL:AY058063 EMBL:AY090303 IPI:IPI00521537 PIR:F84549
            RefSeq:NP_565409.1 UniGene:At.14401 UniGene:At.67733
            UniGene:At.71477 STRING:Q9SII5 PRIDE:Q9SII5
            EnsemblPlants:AT2G17230.1 GeneID:816228 KEGG:ath:AT2G17230
            TAIR:At2g17230 InParanoid:Q9SII5 OMA:INIYVIW PhylomeDB:Q9SII5
            ArrayExpress:Q9SII5 Genevestigator:Q9SII5 Uniprot:Q9SII5
        Length = 363

 Score = 146 (56.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
 Identities = 36/101 (35%), Positives = 55/101 (54%)

Query:    31 IAMTYHKGALLEGNLPVSI--LWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSV 88
             + + YH G +L  + P++I  +WYG++S   KS+I DFL S++  K         P PSV
Sbjct:    77 VHLRYHMGPVLSSS-PINIYVIWYGQWSRPHKSLIRDFLNSISDAK--------APSPSV 127

Query:    89 SKRWHTIQTYMKKAGKGQTR-VFIASQFSDKNCSLGKILKK 128
             S+ W T   Y  + G   +R V IA ++SD   S G+ L +
Sbjct:   128 SEWWRTASLYTDQTGSNVSRSVLIAGEYSDSKYSHGQHLTR 168

 Score = 94 (38.1 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
 Identities = 20/48 (41%), Positives = 24/48 (50%)

Query:   130 QGFCMSNCGFH----GSNPQHNSAFIWVGNSVTPCPGQCAWPFHQPIY 173
             Q FC + CGFH     S   +   + WVG S   CP  CA+PF  P Y
Sbjct:   204 QDFCRAVCGFHYFTFPSMVGYTMPYAWVGQSGKQCPEVCAYPFALPGY 251


>TAIR|locus:2138753 [details] [associations]
            symbol:EXO "AT4G08950" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0005618 "cell wall"
            evidence=IDA] [GO:0009505 "plant-type cell wall" evidence=IDA]
            [GO:0009741 "response to brassinosteroid stimulus"
            evidence=RCA;IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0005794
            "Golgi apparatus" evidence=IDA] [GO:0016126 "sterol biosynthetic
            process" evidence=RCA] GO:GO:0005794 EMBL:CP002687 GO:GO:0009505
            EMBL:AL161513 EMBL:AF128396 GO:GO:0009741 InterPro:IPR006766
            Pfam:PF04674 EMBL:AY054486 EMBL:AY093295 EMBL:AF496655
            IPI:IPI00538314 PIR:C85090 RefSeq:NP_192634.1 UniGene:At.22399
            STRING:Q9ZPE7 PRIDE:Q9ZPE7 EnsemblPlants:AT4G08950.1 GeneID:826473
            KEGG:ath:AT4G08950 TAIR:At4g08950 InParanoid:Q9ZPE7 OMA:RFAYVWV
            PhylomeDB:Q9ZPE7 ProtClustDB:CLSN2916156 Genevestigator:Q9ZPE7
            Uniprot:Q9ZPE7
        Length = 314

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 54/139 (38%), Positives = 80/139 (57%)

Query:     1 MSLLIF--LLHLNFISSCLGARKLTSLYQPSPIAMT-YHKGALLEGNLPVSILWYGEFSP 57
             M LL+F   L L+ +   + AR L S  +P+   +  YHKGALL G + V+++WYG+F P
Sbjct:     1 MYLLVFKLFLFLSLLQISVSARNLAS-QEPNQFQLLKYHKGALLSGKISVNLIWYGKFKP 59

Query:    58 AQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKKA--GKGQT--RVFIAS 113
             +Q++II+DF+ SL    +   +  T  QPSV+  W T + Y K A   K  +   + +  
Sbjct:    60 SQRAIISDFITSLT---HTSPTSKTLHQPSVATWWKTTEKYYKLATPSKNSSPLSLTLGK 116

Query:   114 QFSDKNCSLGKIL--KKAQ 130
             Q  D++CSLGK L  KK Q
Sbjct:   117 QIIDESCSLGKSLTDKKIQ 135

 Score = 156 (60.0 bits), Expect = 6.6e-11, P = 6.6e-11
 Identities = 34/72 (47%), Positives = 43/72 (59%)

Query:   111 IASQFSDKNCSLGKILKKAQ----GFCMSNCGFHGSNP---QHNS--AFIWVGNSVTPCP 161
             +AS+   +N ++  +L  A     GF MS CG HG      +  S  A+IWVGNS T CP
Sbjct:   137 LASKGDQRN-AINVVLTSADVTVTGFGMSRCGTHGHARGLGKRGSKFAYIWVGNSETQCP 195

Query:   162 GQCAWPFHQPIY 173
             GQCAWPFH P+Y
Sbjct:   196 GQCAWPFHAPVY 207


>TAIR|locus:2063399 [details] [associations]
            symbol:EXL7 "AT2G35150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC004667 EMBL:BT006160 EMBL:BT008526
            EMBL:AK229621 IPI:IPI00528702 PIR:C84765 RefSeq:NP_565797.1
            UniGene:At.37700 EnsemblPlants:AT2G35150.1 GeneID:818081
            KEGG:ath:AT2G35150 TAIR:At2g35150 eggNOG:NOG83890
            HOGENOM:HOG000239502 InParanoid:O82176 OMA:ADLCLGV PhylomeDB:O82176
            ProtClustDB:CLSN2687409 ArrayExpress:O82176 Genevestigator:O82176
            InterPro:IPR006766 Pfam:PF04674 Uniprot:O82176
        Length = 323

 Score = 122 (48.0 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
 Identities = 40/134 (29%), Positives = 63/134 (47%)

Query:     1 MSLLIFLLHLNFISSCLGARKLTSL-YQPSP--IAMTYHKGALLEGNLP-VSILWYGEFS 56
             MSL+I     + + +  G     S  Y+ S   + + YH G ++   +  + I+WYG ++
Sbjct:     1 MSLIIVFFFFSLLLTSNGQFFDESKNYEGSSDLVDLQYHLGPVISSPVTSLYIIWYGRWN 60

Query:    57 PAQKSIIADFLLSLN-PQKNQLGSHFTTPQPSVSKRWHTIQTYMKKAGKGQTRVFIAS-Q 114
             P  +SII DFL S++ P   Q         PSVS  W T++ Y  + G   T   + S +
Sbjct:    61 PTHQSIIRDFLYSVSAPAPAQY--------PSVSNWWKTVRLYRDQTGSNITDTLVLSGE 112

Query:   115 FSDKNCSLGKILKK 128
             F D   S G  L +
Sbjct:   113 FHDSTYSHGSHLTR 126

 Score = 103 (41.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
 Identities = 22/46 (47%), Positives = 25/46 (54%)

Query:   130 QGFCMSNCGFHGSN-PQHNSA---FIWVGNSVTPCPGQCAWPFHQP 171
             Q FC + CGFH    P    A   + WVGNS   CP  CA+PF QP
Sbjct:   161 QEFCRAICGFHYFTFPSVVGATVPYAWVGNSERQCPEMCAYPFAQP 206


>TAIR|locus:2075482 [details] [associations]
            symbol:EXL6 "AT3G02970" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC018363
            HOGENOM:HOG000239502 InterPro:IPR006766 Pfam:PF04674
            IPI:IPI00529875 RefSeq:NP_186947.1 UniGene:At.41053 PaxDb:Q9M8T8
            PRIDE:Q9M8T8 EnsemblPlants:AT3G02970.1 GeneID:821168
            KEGG:ath:AT3G02970 TAIR:At3g02970 eggNOG:NOG312816
            InParanoid:Q9M8T8 OMA:VVESYQE PhylomeDB:Q9M8T8
            ProtClustDB:CLSN2913388 Genevestigator:Q9M8T8 Uniprot:Q9M8T8
        Length = 332

 Score = 105 (42.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query:    43 GNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSKRWHTIQTYMKK 101
             G L +S+LWYG+F+P QK  + DF+ SLN    + G       P VS  W  +++Y ++
Sbjct:    37 GTLDLSLLWYGQFTPTQKERVHDFIESLNFDAKE-GL-----DPKVSAWWKVVESYQER 89

 Score = 87 (35.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query:   131 GFCMSNCGFHG----SNPQHNSAFIWVGNSVTPCPGQCAWPFH 169
             GFC   C  +        +    +I V N    CPG+CAWPFH
Sbjct:   163 GFCDGTCQHNALAKIKGQKEPRRYIMVSNPEVECPGECAWPFH 205


>TAIR|locus:2153087 [details] [associations]
            symbol:EXL3 "AT5G51550" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0009505 "plant-type cell
            wall" evidence=IDA] [GO:0080167 "response to karrikin"
            evidence=IEP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0007020
            "microtubule nucleation" evidence=RCA] GO:GO:0009506 EMBL:CP002688
            GO:GO:0080167 GO:GO:0009505 EMBL:AB018109 ProtClustDB:CLSN2687409
            InterPro:IPR006766 Pfam:PF04674 EMBL:AF428325 IPI:IPI00529202
            RefSeq:NP_199968.1 UniGene:At.7809 STRING:Q9FHM9 PRIDE:Q9FHM9
            EnsemblPlants:AT5G51550.1 GeneID:835229 KEGG:ath:AT5G51550
            InParanoid:Q9FHM9 OMA:ITVHPIW Genevestigator:Q9FHM9 Uniprot:Q9FHM9
        Length = 337

 Score = 130 (50.8 bits), Expect = 5.9e-08, P = 5.9e-08
 Identities = 33/99 (33%), Positives = 52/99 (52%)

Query:    31 IAMTYHKGALLEGNLPVSILWYGEFSPAQKSIIADFLLSLNPQKNQLGSHFTTPQPSVSK 90
             + + YH G +L  N+ V  +WYG +  +QK II +F+ S++     +GS      PSVS 
Sbjct:    53 VRLRYHMGPVLTNNITVHPIWYGTWQKSQKKIIREFINSISA----VGSK----HPSVSG 104

Query:    91 RWHTIQTYMKKAGKGQT-RVFIASQFSDKNCSLGKILKK 128
              W T+Q Y  + G   T  V +  + +D+  S GK L +
Sbjct:   105 WWKTVQLYTDQTGSNITGTVRLGEEKNDRFYSHGKSLTR 143


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.440    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      173       173   0.00097  108 3  11 22  0.37    32
                                                     31  0.48    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  175 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.86u 0.14s 16.00t   Elapsed:  00:00:01
  Total cpu time:  15.86u 0.14s 16.00t   Elapsed:  00:00:01
  Start:  Tue May 21 00:38:18 2013   End:  Tue May 21 00:38:19 2013

Back to top