Query 045512
Match_columns 782
No_of_seqs 470 out of 3305
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 04:22:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045512.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045512hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 2.2E-33 7.5E-38 295.7 29.1 248 24-312 5-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 2.6E-33 8.8E-38 296.4 21.4 251 23-313 5-277 (296)
3 2r83_A Synaptotagmin-1; C2A-C2 100.0 2.4E-31 8.3E-36 280.1 28.7 229 202-478 19-273 (284)
4 1dqv_A Synaptotagmin III; beta 100.0 2.5E-31 8.4E-36 281.2 17.3 229 201-477 19-275 (296)
5 2ep6_A MCTP2 protein; beta san 99.8 3.4E-20 1.2E-24 171.1 13.4 124 33-164 6-130 (133)
6 2ep6_A MCTP2 protein; beta san 99.8 4.7E-20 1.6E-24 170.2 13.8 123 363-497 9-132 (133)
7 2dmh_A Myoferlin; beta-sandwic 99.8 2.1E-19 7.1E-24 167.5 16.6 123 38-167 5-134 (140)
8 3b7y_A E3 ubiquitin-protein li 99.8 4.8E-19 1.6E-23 167.7 17.3 129 36-165 16-152 (153)
9 2fk9_A Protein kinase C, ETA t 99.8 2.4E-19 8.3E-24 168.4 14.3 117 364-495 26-155 (157)
10 3kwu_A MUNC13-1; calcium bindi 99.8 1.1E-18 3.8E-23 164.2 18.4 125 366-496 16-146 (148)
11 3kwu_A MUNC13-1; calcium bindi 99.8 8.2E-19 2.8E-23 165.1 17.1 120 38-165 15-146 (148)
12 2dmh_A Myoferlin; beta-sandwic 99.8 7.2E-19 2.4E-23 163.8 16.1 123 365-497 5-133 (140)
13 1wfj_A Putative elicitor-respo 99.8 2.8E-19 9.6E-24 165.7 13.2 122 364-498 7-131 (136)
14 2fk9_A Protein kinase C, ETA t 99.8 2.4E-19 8.1E-24 168.4 12.3 120 35-164 24-155 (157)
15 3m7f_B E3 ubiquitin-protein li 99.8 1.1E-18 3.7E-23 169.3 17.1 130 37-167 5-142 (176)
16 2b3r_A Phosphatidylinositol-4- 99.8 7.9E-19 2.7E-23 162.0 14.9 118 24-149 6-132 (134)
17 2bwq_A Regulating synaptic mem 99.8 5.8E-19 2E-23 161.9 13.8 116 23-146 3-129 (129)
18 1wfj_A Putative elicitor-respo 99.8 3.6E-19 1.2E-23 164.9 11.7 124 36-167 6-131 (136)
19 2d8k_A Synaptotagmin VII; exoc 99.8 1.1E-18 3.7E-23 162.8 13.7 120 24-150 12-138 (141)
20 3b7y_A E3 ubiquitin-protein li 99.8 1.2E-18 4.3E-23 164.8 14.2 123 363-495 16-151 (153)
21 2z0u_A WW domain-containing pr 99.8 4.2E-19 1.4E-23 167.7 10.5 117 24-146 29-154 (155)
22 1rsy_A Synaptotagmin I; calciu 99.8 1.8E-18 6.1E-23 163.5 14.7 118 24-148 28-151 (152)
23 1rh8_A Piccolo protein; beta-s 99.8 4E-19 1.4E-23 166.0 10.1 117 24-149 6-140 (142)
24 1rlw_A Phospholipase A2, CALB 99.8 9.2E-19 3.1E-23 159.9 11.9 114 39-162 2-121 (126)
25 1v27_A Regulating synaptic mem 99.8 1.1E-18 3.7E-23 162.9 11.9 120 23-150 6-136 (141)
26 1gmi_A Protein kinase C, epsil 99.8 1.3E-18 4.5E-23 161.1 12.3 117 38-166 4-133 (136)
27 3f04_A Synaptotagmin-1; C2A, c 99.8 1.9E-18 6.4E-23 161.6 13.3 117 24-147 20-142 (143)
28 2nq3_A Itchy homolog E3 ubiqui 99.8 1.7E-18 5.9E-23 166.5 13.1 126 38-165 34-160 (173)
29 1rlw_A Phospholipase A2, CALB 99.8 1.6E-18 5.5E-23 158.3 11.4 116 366-494 2-122 (126)
30 1gmi_A Protein kinase C, epsil 99.8 3.5E-18 1.2E-22 158.2 13.7 118 366-498 5-134 (136)
31 3m7f_B E3 ubiquitin-protein li 99.8 4.7E-18 1.6E-22 164.7 15.3 124 364-497 5-141 (176)
32 3fdw_A Synaptotagmin-like prot 99.8 1.5E-18 5.2E-23 163.2 10.4 122 23-151 8-138 (148)
33 1wfm_A Synaptotagmin XIII; C2 99.8 8E-18 2.7E-22 156.1 14.8 117 24-150 12-135 (138)
34 3pyc_A E3 ubiquitin-protein li 99.8 6.7E-18 2.3E-22 155.5 14.1 120 39-164 4-131 (132)
35 3fbk_A RGS3, RGP3, regulator o 99.8 7E-18 2.4E-22 159.5 14.0 119 23-150 12-140 (153)
36 2dmg_A KIAA1228 protein; beta- 99.7 5.7E-18 2E-22 158.1 12.3 121 23-151 9-139 (142)
37 3rdl_A Protein kinase C alpha 99.7 6.3E-18 2.2E-22 156.8 12.1 116 24-149 4-126 (137)
38 2chd_A Rabphilin-3A, exophilin 99.7 8.1E-18 2.8E-22 157.0 12.8 118 24-148 15-141 (142)
39 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.3E-17 4.5E-22 154.8 13.9 121 23-149 7-135 (138)
40 1a25_A CALB, protein kinase C 99.7 1.3E-17 4.3E-22 157.1 13.3 116 24-149 19-141 (149)
41 2q3x_A Regulating synaptic mem 99.7 8E-18 2.7E-22 162.1 12.0 116 24-149 18-141 (171)
42 2d8k_A Synaptotagmin VII; exoc 99.7 4.4E-17 1.5E-21 151.8 16.3 119 326-478 10-136 (141)
43 1tjx_A Similar to synaptotagmi 99.7 2.5E-17 8.7E-22 156.8 14.0 122 23-149 10-149 (159)
44 2enp_A B/K protein; C2 type 1, 99.7 1.5E-17 5.3E-22 156.1 12.3 120 23-149 11-143 (147)
45 1rsy_A Synaptotagmin I; calciu 99.7 2.5E-17 8.4E-22 155.6 13.7 105 364-477 39-150 (152)
46 3pyc_A E3 ubiquitin-protein li 99.7 3.4E-17 1.2E-21 150.7 13.6 123 366-495 4-131 (132)
47 2cm5_A Rabphilin-3A; protein t 99.7 5.6E-17 1.9E-21 155.6 15.0 103 24-128 23-133 (166)
48 3fdw_A Synaptotagmin-like prot 99.7 1E-17 3.5E-22 157.5 9.5 121 326-479 7-136 (148)
49 3n5a_A Synaptotagmin-7; calciu 99.7 3.3E-17 1.1E-21 152.1 12.7 104 24-129 2-113 (138)
50 1w15_A Synaptotagmin IV; metal 99.7 3.5E-17 1.2E-21 154.8 12.9 103 23-127 15-125 (153)
51 2z0u_A WW domain-containing pr 99.7 1.7E-17 5.9E-22 156.5 10.3 104 364-476 40-154 (155)
52 3f04_A Synaptotagmin-1; C2A, c 99.7 3.7E-17 1.3E-21 152.7 12.4 118 326-477 18-142 (143)
53 2nq3_A Itchy homolog E3 ubiqui 99.7 6.1E-17 2.1E-21 155.7 13.6 122 365-496 34-160 (173)
54 2bwq_A Regulating synaptic mem 99.7 5.3E-17 1.8E-21 148.8 12.5 103 364-476 15-129 (129)
55 2dmg_A KIAA1228 protein; beta- 99.7 4.6E-17 1.6E-21 151.9 11.1 122 325-478 7-136 (142)
56 1v27_A Regulating synaptic mem 99.7 7.2E-17 2.5E-21 150.4 12.3 121 326-479 5-135 (141)
57 2b3r_A Phosphatidylinositol-4- 99.7 9.3E-17 3.2E-21 148.0 12.7 103 365-477 18-130 (134)
58 3fbk_A RGS3, RGP3, regulator o 99.7 7.3E-17 2.5E-21 152.5 12.3 105 364-478 24-138 (153)
59 3rdl_A Protein kinase C alpha 99.7 1E-16 3.4E-21 148.6 13.0 102 367-478 16-125 (137)
60 2q3x_A Regulating synaptic mem 99.7 1E-16 3.4E-21 154.4 12.2 104 367-478 30-140 (171)
61 1tjx_A Similar to synaptotagmi 99.7 3E-16 1E-20 149.4 15.3 118 326-477 9-147 (159)
62 1ugk_A Synaptotagmin IV, KIAA1 99.7 2.4E-16 8.3E-21 146.2 14.3 120 326-478 6-134 (138)
63 1wfm_A Synaptotagmin XIII; C2 99.7 3.1E-16 1.1E-20 145.3 14.9 116 326-478 10-133 (138)
64 1a25_A CALB, protein kinase C 99.7 2E-16 6.9E-21 148.8 13.4 102 367-478 31-140 (149)
65 2enp_A B/K protein; C2 type 1, 99.7 1.4E-16 4.9E-21 149.5 11.9 122 326-478 10-142 (147)
66 1rh8_A Piccolo protein; beta-s 99.7 4.8E-17 1.6E-21 151.8 8.0 102 367-477 18-138 (142)
67 2chd_A Rabphilin-3A, exophilin 99.7 2.3E-16 8E-21 147.1 12.6 118 326-477 13-140 (142)
68 3n5a_A Synaptotagmin-7; calciu 99.7 4E-16 1.4E-20 144.7 13.8 92 364-464 13-113 (138)
69 2cm5_A Rabphilin-3A; protein t 99.7 7.6E-16 2.6E-20 147.6 15.0 118 326-477 21-159 (166)
70 2cjt_A UNC-13 homolog A, MUNC1 99.6 5.5E-16 1.9E-20 141.9 10.1 88 38-132 3-92 (131)
71 3l9b_A Otoferlin; C2-domain, b 99.6 1.6E-15 5.5E-20 136.0 11.9 115 41-166 22-140 (144)
72 2cjs_A UNC-13 homolog A, MUNC1 99.6 2.5E-15 8.6E-20 143.1 12.1 121 38-165 12-140 (167)
73 1w15_A Synaptotagmin IV; metal 99.6 3.9E-15 1.3E-19 140.7 13.3 89 202-291 30-125 (153)
74 2cjt_A UNC-13 homolog A, MUNC1 99.6 3.6E-15 1.2E-19 136.4 10.7 85 366-465 4-90 (131)
75 3l9b_A Otoferlin; C2-domain, b 99.6 8.8E-15 3E-19 131.2 11.8 117 367-499 21-142 (144)
76 3jzy_A Intersectin 2; C2 domai 99.6 6E-15 2E-19 168.1 12.7 122 37-164 384-506 (510)
77 3nsj_A Perforin-1; pore formin 99.6 1.4E-14 4.8E-19 162.4 14.3 109 38-164 392-502 (540)
78 2cjs_A UNC-13 homolog A, MUNC1 99.5 2.1E-14 7.3E-19 136.7 12.1 117 365-496 12-140 (167)
79 3nsj_A Perforin-1; pore formin 99.5 4.2E-14 1.4E-18 158.5 16.2 125 364-513 391-518 (540)
80 3jzy_A Intersectin 2; C2 domai 99.5 2.2E-14 7.4E-19 163.4 13.6 118 364-496 384-507 (510)
81 1djx_A PLC-D1, phosphoinositid 99.5 6E-14 2E-18 161.1 16.2 119 38-164 495-622 (624)
82 1cjy_A CPLA2, protein (cytosol 99.5 7.9E-14 2.7E-18 161.0 10.2 106 38-148 16-127 (749)
83 3bxj_A RAS GTPase-activating p 99.5 5.4E-15 1.8E-19 165.6 -0.2 124 365-498 9-158 (483)
84 1djx_A PLC-D1, phosphoinositid 99.4 4.7E-13 1.6E-17 153.6 15.0 119 365-495 495-622 (624)
85 3bxj_A RAS GTPase-activating p 99.3 2E-13 6.7E-18 153.0 -0.6 100 39-149 10-118 (483)
86 1cjy_A CPLA2, protein (cytosol 99.3 5.4E-12 1.9E-16 145.7 10.3 107 199-312 15-127 (749)
87 3ohm_B 1-phosphatidylinositol- 99.2 4.8E-11 1.6E-15 140.0 13.7 112 40-166 725-845 (885)
88 3qr0_A Phospholipase C-beta (P 99.2 7.5E-11 2.6E-15 137.7 14.9 112 40-166 650-771 (816)
89 3pfq_A PKC-B, PKC-beta, protei 99.2 2.7E-11 9.1E-16 142.1 10.3 105 39-149 171-282 (674)
90 2zkm_X 1-phosphatidylinositol- 99.2 1.3E-10 4.5E-15 136.6 14.2 111 39-164 677-797 (799)
91 3pfq_A PKC-B, PKC-beta, protei 99.1 1.6E-10 5.5E-15 135.4 9.4 103 366-478 171-281 (674)
92 3qr0_A Phospholipase C-beta (P 99.0 8.9E-10 3E-14 128.7 14.1 110 366-496 649-770 (816)
93 3ohm_B 1-phosphatidylinositol- 99.0 6.6E-10 2.3E-14 130.4 11.6 110 366-496 724-844 (885)
94 2zkm_X 1-phosphatidylinositol- 99.0 1.3E-09 4.5E-14 128.1 12.8 111 365-495 676-797 (799)
95 1yrk_A NPKC-delta, protein kin 98.9 1.4E-08 4.7E-13 88.2 10.5 113 40-164 6-123 (126)
96 1yrk_A NPKC-delta, protein kin 98.8 7.6E-08 2.6E-12 83.6 13.6 105 367-495 6-123 (126)
97 2enj_A NPKC-theta, protein kin 98.8 1.4E-08 4.8E-13 89.3 8.4 114 40-165 10-129 (138)
98 2enj_A NPKC-theta, protein kin 98.8 5.5E-08 1.9E-12 85.6 11.4 108 367-495 10-128 (138)
99 2yrb_A Protein fantom; beta sa 92.4 0.5 1.7E-05 42.9 8.7 127 35-166 13-150 (156)
100 2wxf_A Phosphatidylinositol-4, 86.1 3.5 0.00012 49.0 11.8 69 40-111 217-294 (940)
101 3l4c_A Dedicator of cytokinesi 85.4 8.7 0.0003 36.9 12.0 76 73-164 78-156 (220)
102 3hhm_A Phosphatidylinositol-4, 84.8 5.5 0.00019 47.7 12.6 107 32-164 350-470 (1091)
103 2yrb_A Protein fantom; beta sa 82.4 4.7 0.00016 36.6 8.3 125 364-497 15-150 (156)
104 2wxf_A Phosphatidylinositol-4, 81.4 5.7 0.0002 47.2 10.9 92 367-463 217-324 (940)
105 3l4c_A Dedicator of cytokinesi 79.3 5.2 0.00018 38.5 7.9 59 401-461 77-138 (220)
106 3hhm_A Phosphatidylinositol-4, 78.9 7.6 0.00026 46.5 10.8 91 366-463 354-455 (1091)
107 1e7u_A Phosphatidylinositol 3- 73.5 13 0.00045 44.1 10.9 70 41-111 219-296 (961)
108 2y3a_A Phosphatidylinositol-4, 69.3 4.1 0.00014 49.0 5.3 69 40-111 353-430 (1092)
109 2y3a_A Phosphatidylinositol-4, 67.2 6.3 0.00022 47.4 6.3 93 366-463 352-470 (1092)
110 1e7u_A Phosphatidylinositol 3- 62.4 25 0.00085 41.8 10.1 93 367-463 218-330 (961)
111 1gk7_A Vimentin; intermediate 38.4 24 0.00082 23.7 2.7 19 696-714 7-25 (39)
112 3hd7_A Vesicle-associated memb 33.0 99 0.0034 25.0 6.3 38 686-723 34-71 (91)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=2.2e-33 Score=295.70 Aligned_cols=248 Identities=27% Similarity=0.403 Sum_probs=206.3
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---eeeeeccccCCCCCeeccEEEEEecc--C
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN---YKGIAKHLEKNQNPVWNQIFAFSKER--L 98 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~---~~~~T~~i~~t~nP~wne~f~f~~~~--~ 98 (782)
.|...+++.|+. ..+.|.|+|++|+||+.+|..|.+||||++++++ ++++|+++++|+||+|||+|.|.+.. .
T Consensus 5 ~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~ 82 (284)
T 2r83_A 5 LGKLQYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSEL 82 (284)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGC
T ss_pred eeEEEEEEEEEC--CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHh
Confidence 577889999987 5679999999999999999899999999999964 47899999999999999999999753 3
Q ss_pred CCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCC-cccceEEEEEEEEcccCCccccccc
Q 045512 99 QSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGD-KITQGEIMLAVWIGTQADESFSEAW 176 (782)
Q Consensus 99 ~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~l~l~~~~~~~~d~~~~~~~ 176 (782)
....|.|+|||++.+ +|++||++.++|.++..+. ...+|++|....+. ....|+|.+++.+.
T Consensus 83 ~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~w~~L~~~~~~~~~~~G~i~l~l~~~----------- 146 (284)
T 2r83_A 83 AGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSAEKEEQEKLGDICFSLRYV----------- 146 (284)
T ss_dssp TTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSS-----CEEEEEECBCCSSCCCCCCCEEEEEEEEE-----------
T ss_pred CcCEEEEEEEECCCCCCCceeEEEEEcchhcccCC-----cceeEEEeeccccccccccccEEEEEEec-----------
Confidence 467999999999998 8999999999999997753 26799999876532 22249999988664
Q ss_pred cccccccccccccccccccccCCceEEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC--C---eeeecccccCCCCCCccc
Q 045512 177 HSDAHNISQTNLANTISKVYFSPKLYYLRVFVFEAQDLVPSEEGRAPDAYVKIQLG--N---LVRVTRPSHVRSVNPVWN 251 (782)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~p~~~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg--~---~~~kT~~~~~~t~nP~wn 251 (782)
|..+.|.|.|++|++|+.++..+.+||||++.+. + ...+|+++++ +.||.||
T Consensus 147 ----------------------p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wn 203 (284)
T 2r83_A 147 ----------------------PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYN 203 (284)
T ss_dssp ----------------------TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEE
T ss_pred ----------------------CcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecC-CCCCEEc
Confidence 2234699999999999999999999999999985 2 4678998886 9999999
Q ss_pred ceeEEEecCCC--CCeEEEEEEEccCCCCCceeEEEEEeCCCccccc-------CCCCCCCCeeEEccCC
Q 045512 252 EEHMFVASEPF--EDLIIVTVEDRIGPGKDEILGREFIPVRNVPQRH-------ETTKLPDPRWFNLHKP 312 (782)
Q Consensus 252 e~f~f~v~~~~--~~~L~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~-------~~~~~~~~~w~~L~~~ 312 (782)
|.|.|.+.... ...|.|+|||++..+++++||++.++++.+.... ...+....+||+|.+.
T Consensus 204 e~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 204 ESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred eeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99999986543 3469999999999999999999999998743210 0234456799999875
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=2.6e-33 Score=296.41 Aligned_cols=251 Identities=25% Similarity=0.342 Sum_probs=204.9
Q ss_pred ccCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeeeeeccccCCCCCeeccEEEEEecc--
Q 045512 23 YRGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKL---GNYKGIAKHLEKNQNPVWNQIFAFSKER-- 97 (782)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~---~~~~~~T~~i~~t~nP~wne~f~f~~~~-- 97 (782)
..|...+++.|+. ..+.|.|+|++|++|+.+|..|.+||||++++ +.++++|+++++|+||+|||+|.|.+..
T Consensus 5 ~~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 82 (296)
T 1dqv_A 5 PCGRISFALRYLY--GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAE 82 (296)
T ss_dssp SSCEEEEEEECCS--SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGG
T ss_pred eeeEEEEEEEEeC--CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHH
Confidence 3688899999987 46799999999999999999999999999999 4578899999999999999999999753
Q ss_pred CCCCeEEEEEEeCCCC-CCceeEEEEEE-ccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEEcccCCcccccc
Q 045512 98 LQSNLVEVTVKDKDIG-KDDFVGRVTFD-LFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWIGTQADESFSEA 175 (782)
Q Consensus 98 ~~~~~L~v~V~d~d~~-~d~~lG~~~i~-l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~~~d~~~~~~ 175 (782)
.....|.|+|||+|.+ ++++||++.++ +.++.... .....|++|....+.....|+|.+++.+..
T Consensus 83 l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~----~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~--------- 149 (296)
T 1dqv_A 83 LAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQP----PDRPLWRDILEGGSEKADLGELNFSLCYLP--------- 149 (296)
T ss_dssp GSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSC----SSCCCCEECBCCSSCCSCCCEEEEEEEEET---------
T ss_pred hcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCC----ccceeeeccccccccccccceEEEEEEecc---------
Confidence 3456899999999998 89999999996 54444321 125689999876544333599999987642
Q ss_pred ccccccccccccccccccccccCCceEEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC--C---eeeecccccCCCCCCcc
Q 045512 176 WHSDAHNISQTNLANTISKVYFSPKLYYLRVFVFEAQDLVPSEEGRAPDAYVKIQLG--N---LVRVTRPSHVRSVNPVW 250 (782)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg--~---~~~kT~~~~~~t~nP~w 250 (782)
..+.|+|+|++|++|+.++..|.+||||++.+. + .+++|+++++ +.||.|
T Consensus 150 ------------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~w 204 (296)
T 1dqv_A 150 ------------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKN-TLNPTY 204 (296)
T ss_dssp ------------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCS-CSSCEE
T ss_pred ------------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecC-CCCCeE
Confidence 234799999999999999999999999999996 2 5678999886 999999
Q ss_pred cceeEEEecCCC--CCeEEEEEEEccCCCCCceeEEEEEeCCCccc-cc-------CCCCCCCCeeEEccCCC
Q 045512 251 NEEHMFVASEPF--EDLIIVTVEDRIGPGKDEILGREFIPVRNVPQ-RH-------ETTKLPDPRWFNLHKPS 313 (782)
Q Consensus 251 ne~f~f~v~~~~--~~~L~i~V~d~d~~~~d~~lG~~~i~l~~l~~-~~-------~~~~~~~~~w~~L~~~~ 313 (782)
||.|.|.+.... ...|.|+|||++..+++++||++.++++.+.. .. ...+....+|+.|....
T Consensus 205 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~~ 277 (296)
T 1dqv_A 205 NEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEEK 277 (296)
T ss_dssp EECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBCC
T ss_pred CceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCcc
Confidence 999999886543 34799999999999999999999999987643 00 02344677888887764
No 3
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=2.4e-31 Score=280.08 Aligned_cols=229 Identities=24% Similarity=0.295 Sum_probs=189.0
Q ss_pred EEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC---eeeecccccCCCCCCcccceeEEEecCC--CCCeEEEEEEEccCC
Q 045512 202 YYLRVFVFEAQDLVPSEEGRAPDAYVKIQLGN---LVRVTRPSHVRSVNPVWNEEHMFVASEP--FEDLIIVTVEDRIGP 276 (782)
Q Consensus 202 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~---~~~kT~~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~V~d~d~~ 276 (782)
+.|+|+|++|++|+.++..+.+||||++.+++ +.++|+++++ +.||.|||+|.|.+... ....|.|+|||++..
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~ 97 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRF 97 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCS-CSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccC-CCCCeeCceEEEEechHHhCcCEEEEEEEECCCC
Confidence 46999999999999999999999999999963 5788999987 99999999999998643 356899999999999
Q ss_pred CCCceeEEEEEeCCCcccccCCCCCCCCeeEEccCCCCCcccccccccceecceEEEEEEeccccccCCCCCCCCCCCCc
Q 045512 277 GKDEILGREFIPVRNVPQRHETTKLPDPRWFNLHKPSLSAEEGAEKKKEKFSSKILIRFCLEAGYHVLDESTHFSSDLQP 356 (782)
Q Consensus 277 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~g~~~~~~~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~ 356 (782)
+++++||++.++|.++... .....|++|..... ......|.+.+.+.+.
T Consensus 98 ~~~~~lG~~~i~l~~l~~~-----~~~~~w~~L~~~~~--------~~~~~~G~i~l~l~~~------------------ 146 (284)
T 2r83_A 98 SKHDIIGEFKVPMNTVDFG-----HVTEEWRDLQSAEK--------EEQEKLGDICFSLRYV------------------ 146 (284)
T ss_dssp SCCCEEEEEEEEGGGCCCS-----SCEEEEEECBCCSS--------CCCCCCCEEEEEEEEE------------------
T ss_pred CCCceeEEEEEcchhcccC-----CcceeEEEeecccc--------ccccccccEEEEEEec------------------
Confidence 9999999999999998742 24678999987531 0123458887776532
Q ss_pred cccccccCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEEC--C---EEEeeccccCCCCCccccEEEEEEeCC---
Q 045512 357 SSMSLRKGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYG--N---KWIRTRTILDTLDPRWNEQYTWEVYDP--- 427 (782)
Q Consensus 357 ~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~--~---~~~~T~~~~~t~nP~wne~~~f~v~~~--- 427 (782)
+..+.|.|.|++|+||++++. .|. ||||++++. + .+.+|+++++++||+|||.|.|.+...
T Consensus 147 -------p~~~~l~v~v~~a~~L~~~d~---~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 216 (284)
T 2r83_A 147 -------PTAGKLTVVILEAKNLKKMDV---GGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQ 216 (284)
T ss_dssp -------TTTTEEEEEEEEEESCCCCST---TSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGG
T ss_pred -------CcCCceEEEEEEeECCCCcCC---CCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhC
Confidence 345789999999999998753 366 999999984 3 468999999999999999999999754
Q ss_pred CceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccc------------cCCcEEEEEEEceee
Q 045512 428 CTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTL------------ETDRLYTHYYPLLVL 478 (782)
Q Consensus 428 ~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l------------~~~~~~~~~~~L~~~ 478 (782)
...|.|+|||++.++ +|++||++.|+++.+ ..+....+||+|...
T Consensus 217 ~~~l~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 217 KVQVVVTVLDYDKIG------KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp GEEEEEEEEECCSSS------CCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred ceEEEEEEEeCCCCC------CCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 347999999999876 899999999999863 245667899999753
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=2.5e-31 Score=281.22 Aligned_cols=229 Identities=21% Similarity=0.298 Sum_probs=185.6
Q ss_pred eEEEEEEEEEeeCCCCCCCCCCCCcEEEEEE---CCeeeecccccCCCCCCcccceeEEEecCC--CCCeEEEEEEEccC
Q 045512 201 LYYLRVFVFEAQDLVPSEEGRAPDAYVKIQL---GNLVRVTRPSHVRSVNPVWNEEHMFVASEP--FEDLIIVTVEDRIG 275 (782)
Q Consensus 201 ~~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l---g~~~~kT~~~~~~t~nP~wne~f~f~v~~~--~~~~L~i~V~d~d~ 275 (782)
.+.|+|+|++|++|+.+|..|.+||||++.+ +.+.++|+++++ +.||.|||+|.|.+... ....|.|+|||+|.
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~ 97 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR 97 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC
Confidence 3479999999999999999999999999999 467889999987 99999999999998543 24589999999999
Q ss_pred CCCCceeEEEEEe-CCCcccccCCCCCCCCeeEEccCCCCCcccccccccceecceEEEEEEeccccccCCCCCCCCCCC
Q 045512 276 PGKDEILGREFIP-VRNVPQRHETTKLPDPRWFNLHKPSLSAEEGAEKKKEKFSSKILIRFCLEAGYHVLDESTHFSSDL 354 (782)
Q Consensus 276 ~~~d~~lG~~~i~-l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~g~~~~~~~~~G~l~l~v~~~~~~~~~~~~~~~~~d~ 354 (782)
++++++||++.++ +..+.. .......|+.|..... .....|.|.+.++..
T Consensus 98 ~~~~~~iG~~~i~~l~~~~~----~~~~~~~w~~L~~~~~---------~~~~~G~i~vsl~y~---------------- 148 (296)
T 1dqv_A 98 FSRHDLIGQVVLDNLLELAE----QPPDRPLWRDILEGGS---------EKADLGELNFSLCYL---------------- 148 (296)
T ss_dssp SSCCCEEEEEECCCTTGGGS----SCSSCCCCEECBCCSS---------CCSCCCEEEEEEEEE----------------
T ss_pred CCCCceEEEEEecccccccc----CCccceeeeccccccc---------cccccceEEEEEEec----------------
Confidence 9999999999996 444442 1224678999976531 123458888877542
Q ss_pred CccccccccCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEEC--C---EEEeeccccCCCCCccccEEEEEEeCC-
Q 045512 355 QPSSMSLRKGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYG--N---KWIRTRTILDTLDPRWNEQYTWEVYDP- 427 (782)
Q Consensus 355 ~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~--~---~~~~T~~~~~t~nP~wne~~~f~v~~~- 427 (782)
+..|.|.|.|++|+||+++|. .|. ||||++++. + .++||+++++++||+|||.|.|.+...
T Consensus 149 ---------~~~~~l~v~v~~a~~L~~~d~---~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 216 (296)
T 1dqv_A 149 ---------PTAGLLTVTIIKASNLKAMDL---TGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPES 216 (296)
T ss_dssp ---------TTTTEEEEEEEEEESCCCCSS---SSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGG
T ss_pred ---------cccceeEEEEEEeecCCccCC---CCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHH
Confidence 345899999999999998763 366 999999995 3 568999999999999999999998753
Q ss_pred --CceEEEEEEeCCCCCCCCCCcCCCccEEEEEeccccc-------------CCcEEEEEEEcee
Q 045512 428 --CTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLE-------------TDRLYTHYYPLLV 477 (782)
Q Consensus 428 --~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~-------------~~~~~~~~~~L~~ 477 (782)
...|.|+|||++.++ +|++||.+.|+++.+. .++...+|++|..
T Consensus 217 l~~~~L~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~ 275 (296)
T 1dqv_A 217 VENVGLSIAVVDYDCIG------HNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVE 275 (296)
T ss_dssp GGSCCCCCEEEECCSSS------CCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBB
T ss_pred ccCcEEEEEEEeCCCCC------CCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccC
Confidence 347999999999876 8999999999999863 3445566777764
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=3.4e-20 Score=171.14 Aligned_cols=124 Identities=32% Similarity=0.533 Sum_probs=109.3
Q ss_pred ecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEeccCCCCeEEEEEEeCCC
Q 045512 33 YDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGIAKHLEKNQNPVWNQIFAFSKERLQSNLVEVTVKDKDI 112 (782)
Q Consensus 33 ~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~i~~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d~ 112 (782)
..+.++.+.|.|+|++|++|+.++..|.+||||++++++++++|+++++|+||+|||+|.|.+.+. ...|.|+|||++.
T Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d~ 84 (133)
T 2ep6_A 6 SGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDEDG 84 (133)
T ss_dssp CCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEET
T ss_pred ccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECCC
Confidence 445668899999999999999999899999999999999999999999999999999999999875 5789999999999
Q ss_pred C-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEE
Q 045512 113 G-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWI 164 (782)
Q Consensus 113 ~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 164 (782)
. +|++||++.+++.++..+ ..+|++|....+.....|+|++++.+
T Consensus 85 ~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 85 DKPPDFLGKVAIPLLSIRDG-------QPNCYVLKNKDLEQAFKGVIYLEMDL 130 (133)
T ss_dssp TEEEEECCBCEEEGGGCCSS-------CCEECCCBCSCTTSCCSSEEEEEEEE
T ss_pred CCCCCeeEEEEEEHHHccCC-------CceEEEeecCCCCCccceEEEEEEEE
Confidence 9 899999999999999653 35899998776443334999999865
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=4.7e-20 Score=170.22 Aligned_cols=123 Identities=25% Similarity=0.460 Sum_probs=107.9
Q ss_pred cCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECCEEEeeccccCCCCCccccEEEEEEeCCCceEEEEEEeCCCC
Q 045512 363 KGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGNKWIRTRTILDTLDPRWNEQYTWEVYDPCTVITIGVFDNCHV 441 (782)
Q Consensus 363 ~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~~T~~~~~t~nP~wne~~~f~v~~~~~~l~i~V~d~~~~ 441 (782)
....|.|+|+|++|+||++++. .|. ||||+++++++++||+++++++||.|||.|.|.+.++...|.|+|||++.+
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAADF---SGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGD 85 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCSSS---SSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETT
T ss_pred cCCceEEEEEEEeeECCCCCCC---CCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCC
Confidence 4567999999999999997753 366 999999999999999999999999999999999998888999999999986
Q ss_pred CCCCCCcCCCccEEEEEecccccCCcEEEEEEEceeeCCCCCccccEEEEEEEEEE
Q 045512 442 NGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVLTPSGLKKNGELHLALRFTC 497 (782)
Q Consensus 442 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~ 497 (782)
+ +|++||++.|+|.++..+. .+||+|.....++ ...|+|+|+++|.+
T Consensus 86 ~------~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 86 K------PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIY 132 (133)
T ss_dssp E------EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEE
T ss_pred C------CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEe
Confidence 5 7999999999999998776 6899998754433 45699999998843
No 7
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=2.1e-19 Score=167.47 Aligned_cols=123 Identities=27% Similarity=0.387 Sum_probs=107.4
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEeccC---CCCeEEEEEEeCCCC-
Q 045512 38 QMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGIAKHLEKNQNPVWNQIFAFSKERL---QSNLVEVTVKDKDIG- 113 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~i~~t~nP~wne~f~f~~~~~---~~~~L~v~V~d~d~~- 113 (782)
..+.|.|+|++|++|+.++. |.+||||++++++++++|+++++++||+|||+|.|.+... ....|.|+|||++.+
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~ 83 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIG 83 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSS
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCC
Confidence 45799999999999999998 9999999999999999999999999999999999998643 358899999999998
Q ss_pred CCceeEEEEEEccccCCCCCCCCCCCCeEEE---eecCCCCcccceEEEEEEEEccc
Q 045512 114 KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYR---LEDRKGDKITQGEIMLAVWIGTQ 167 (782)
Q Consensus 114 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~---L~~~~~~~~~~G~l~l~~~~~~~ 167 (782)
+|++||++.+++.++..+.. ...|++ |.+..+.... |+|++++.|.+.
T Consensus 84 ~~~~lG~~~i~l~~l~~~~~-----~~~w~~l~~l~~~~~~~~~-G~l~l~~~~~p~ 134 (140)
T 2dmh_A 84 QNKLIGTATVALKDLTGDQS-----RSLPYKLISLLNEKGQDTG-ATIDLVIGYDPP 134 (140)
T ss_dssp SCCCCEEEEEEGGGTCSSSC-----EEEEEEEEEEECTTCCEEE-EEEEEEEEECCC
T ss_pred CCceEEEEEEEHHHhccCCC-----ceeEEeeeeccCCCCCCCC-CEEEEEEEEECC
Confidence 89999999999999976542 568988 7766665554 999999988753
No 8
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.81 E-value=4.8e-19 Score=167.70 Aligned_cols=129 Identities=26% Similarity=0.374 Sum_probs=102.1
Q ss_pred cccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeccccCCCCCeeccEEEEEeccCCCCeEEEEEEe
Q 045512 36 VEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN------YKGIAKHLEKNQNPVWNQIFAFSKERLQSNLVEVTVKD 109 (782)
Q Consensus 36 ~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~i~~t~nP~wne~f~f~~~~~~~~~L~v~V~d 109 (782)
....+.|.|+|++|++|+.++..|.+||||++++++ ..++|+++++|+||+|||+|.|.+... ...|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 345679999999999999999889999999999974 578999999999999999999998764 5789999999
Q ss_pred CCCC-CCceeEEEEEEccccCCCCCCC-CCCCCeEEEeecCCCCcccceEEEEEEEEc
Q 045512 110 KDIG-KDDFVGRVTFDLFEVPHRVPPD-SPLAPQWYRLEDRKGDKITQGEIMLAVWIG 165 (782)
Q Consensus 110 ~d~~-~d~~lG~~~i~l~~l~~~~~~~-~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 165 (782)
++.. +|++||++.++|.++....... ..+..+||+|....+.....|+|++++.|.
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 9998 8999999999999998764321 234579999987653322349999999874
No 9
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.81 E-value=2.4e-19 Score=168.36 Aligned_cols=117 Identities=20% Similarity=0.272 Sum_probs=100.8
Q ss_pred CcceEEEEEEEEeeCCCCCCCCC-------CCCC-CcEEEEEECCEE-EeeccccCCCCCccccEEEEEEeCCCceEEEE
Q 045512 364 GSIGILELGILSAKNLMPMTSKD-------GKLT-DAYCVAKYGNKW-IRTRTILDTLDPRWNEQYTWEVYDPCTVITIG 434 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~-------~~~~-dpyv~v~~~~~~-~~T~~~~~t~nP~wne~~~f~v~~~~~~l~i~ 434 (782)
...|.|+|+|++|+||+++|... ..|. ||||+++++++. .||+++++|+||+|||.|+|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 56799999999999999876210 1255 999999999876 699999999999999999999976 3689999
Q ss_pred EEeCCCCCCCCCCcCCCccEEEEEecccccCC----cEEEEEEEceeeCCCCCccccEEEEEEEE
Q 045512 435 VFDNCHVNGSKDDAIDQRIGKVRIRLSTLETD----RLYTHYYPLLVLTPSGLKKNGELHLALRF 495 (782)
Q Consensus 435 V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~----~~~~~~~~L~~~~~~g~~~~G~i~l~~~~ 495 (782)
|||++.++ +|++||++.|+|.++..+ ...+.||+|.. .|+|+|+++|
T Consensus 105 V~D~d~~~------~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------~G~i~l~l~~ 155 (157)
T 2fk9_A 105 VFHETPLG------YDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------EGKVFVVITL 155 (157)
T ss_dssp EEECCSSS------SCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------SCEEEEEEEE
T ss_pred EEECCCCC------CCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------CcEEEEEEEE
Confidence 99999876 899999999999999754 77899999952 5999999887
No 10
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.80 E-value=1.1e-18 Score=164.16 Aligned_cols=125 Identities=22% Similarity=0.342 Sum_probs=103.4
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECCEEEeeccccCCCCCccccEEEEEEeCCCceEEEEEEeCCCCC--
Q 045512 366 IGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGNKWIRTRTILDTLDPRWNEQYTWEVYDPCTVITIGVFDNCHVN-- 442 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~~T~~~~~t~nP~wne~~~f~v~~~~~~l~i~V~d~~~~~-- 442 (782)
.|.|+|+|++|+||++++. .|. ||||+++++++.++|+++++++||.|||.|.|.+..+...|.|+|||++...
T Consensus 16 ~~~L~V~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDK---TGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CEEEEEEEEEEESCCCCST---TSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred ccEEEEEEEeeeCCCCCCC---CCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 5999999999999998754 366 9999999999999999999999999999999999988889999999999740
Q ss_pred ---CCCCCcCCCccEEEEEecccccCCcEEEEEEEceeeCCCCCccccEEEEEEEEE
Q 045512 443 ---GSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVLTPSGLKKNGELHLALRFT 496 (782)
Q Consensus 443 ---~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 496 (782)
...+.++|++||++.|+|.++. ....+||+|......+ ...|+|+|++.|+
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred cccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 0000127999999999999994 4558999998543322 3469999998874
No 11
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.80 E-value=8.2e-19 Score=165.08 Aligned_cols=120 Identities=32% Similarity=0.527 Sum_probs=105.2
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEeccCCCCeEEEEEEeCCCC----
Q 045512 38 QMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGIAKHLEKNQNPVWNQIFAFSKERLQSNLVEVTVKDKDIG---- 113 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~i~~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d~~---- 113 (782)
..+.|.|+|++|++|+.+|..|.+||||++++++++++|+++++|+||+|||+|.|.+... ...|.|+|||++..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~~ 93 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKSR 93 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCcccc
Confidence 4589999999999999999999999999999999999999999999999999999998765 47899999999973
Q ss_pred --------CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEEc
Q 045512 114 --------KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWIG 165 (782)
Q Consensus 114 --------~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 165 (782)
++++||++.+++.++... ..+||+|....+.....|+|++++.+.
T Consensus 94 ~~~~~~~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 94 VKQRFKRESDDFLGQTIIEVRTLSGE-------MDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHTTTSSCSSEEEEEEEEEGGGCCSE-------EEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccCCCCccEEEEEEEHHHCcCC-------CCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 899999999999999321 569999997654433349999999774
No 12
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=7.2e-19 Score=163.82 Aligned_cols=123 Identities=21% Similarity=0.310 Sum_probs=104.7
Q ss_pred cceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECCEEEeeccccCCCCCccccEEEEEEeCC----CceEEEEEEeCC
Q 045512 365 SIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGNKWIRTRTILDTLDPRWNEQYTWEVYDP----CTVITIGVFDNC 439 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~~T~~~~~t~nP~wne~~~f~v~~~----~~~l~i~V~d~~ 439 (782)
..|.|.|+|++|+||++++ . |. ||||+++++++++||+++++++||+|||.|.|.+..+ ...|.|+|||++
T Consensus 5 ~~g~L~v~v~~a~~L~~~~---~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTK---F-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp BCCEEEEEEEEEESCCCCS---S-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred CCcEEEEEEEEeeCCCCCC---C-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 4589999999999999765 3 56 9999999999999999999999999999999999753 578999999999
Q ss_pred CCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceee-CCCCCccccEEEEEEEEEE
Q 045512 440 HVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVL-TPSGLKKNGELHLALRFTC 497 (782)
Q Consensus 440 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~-~~~g~~~~G~i~l~~~~~~ 497 (782)
.++ +|++||++.|+|.++..+.....|++|... ...+....|+|+++++|.+
T Consensus 81 ~~~------~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 81 TIG------QNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp CSS------SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred CCC------CCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 876 789999999999999888888899983322 2233345699999998854
No 13
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.80 E-value=2.8e-19 Score=165.70 Aligned_cols=122 Identities=23% Similarity=0.329 Sum_probs=106.8
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECCEEEeecccc-CCCCCccccEEEEEEeCCCceEEEEEEeCCCC
Q 045512 364 GSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGNKWIRTRTIL-DTLDPRWNEQYTWEVYDPCTVITIGVFDNCHV 441 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~~T~~~~-~t~nP~wne~~~f~v~~~~~~l~i~V~d~~~~ 441 (782)
.+.|.|.|+|++|+||++++. .|. ||||+++++++.+||++++ +++||.|||.|.|.+.+....|.|+|||++.+
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADF---LNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVG 83 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCS---SCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSC
T ss_pred CCcEEEEEEEEeccCCCCccc---CCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCC
Confidence 456999999999999998753 366 9999999999999999998 89999999999999998778999999999987
Q ss_pred CCCCCCcCCCccEEEEEecccc-cCCcEEEEEEEceeeCCCCCccccEEEEEEEEEEC
Q 045512 442 NGSKDDAIDQRIGKVRIRLSTL-ETDRLYTHYYPLLVLTPSGLKKNGELHLALRFTCT 498 (782)
Q Consensus 442 ~~~~~~~~d~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~ 498 (782)
+ +|++||++.|+|.++ ..+.....||+|. . +.+..|+|+|+++|.+.
T Consensus 84 ~------~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~---~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 84 T------EDDAVGEATIPLEPVFVEGSIPPTAYNVV-K---DEEYKGEIWVALSFKPS 131 (136)
T ss_dssp T------TTCCSEEEEEESHHHHHHSEEEEEEEEEE-E---TTEEEEEEEEEEEEEEC
T ss_pred C------CCceEEEEEEEHHHhccCCCCCcEEEEee-c---CCccCEEEEEEEEEEeC
Confidence 6 899999999999999 5566678999998 2 22456999999999764
No 14
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.80 E-value=2.4e-19 Score=168.45 Aligned_cols=120 Identities=23% Similarity=0.343 Sum_probs=101.2
Q ss_pred ccccccEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCee-eeeccccCCCCCeeccEEEEEeccCCCCeE
Q 045512 35 LVEQMHYLFVNVVKARNLPVMDV----------SGSLDPYVEVKLGNYK-GIAKHLEKNQNPVWNQIFAFSKERLQSNLV 103 (782)
Q Consensus 35 ~~~~~~~L~V~v~~a~~L~~~d~----------~g~~dPyv~v~~~~~~-~~T~~i~~t~nP~wne~f~f~~~~~~~~~L 103 (782)
+....|.|+|+|++|++|+++|. .|.+||||++++++++ .+|+++++|+||+|||+|.|.+.+ ...|
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L 101 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHL 101 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEE
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC--CCEE
Confidence 34567899999999999998873 3679999999999865 699999999999999999999876 4689
Q ss_pred EEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEE
Q 045512 104 EVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWI 164 (782)
Q Consensus 104 ~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 164 (782)
.|+|||+|.+ +|++||++.|++.++..+.. +....+.||+|++ .|+|++.+.+
T Consensus 102 ~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~-~~~~~~~W~~L~~-------~G~i~l~l~~ 155 (157)
T 2fk9_A 102 ELAVFHETPLGYDHFVANCTLQFQELLRTTG-ASDTFEGWVDLEP-------EGKVFVVITL 155 (157)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHHHHHT-TCSEEEEEEECBS-------SCEEEEEEEE
T ss_pred EEEEEECCCCCCCCEEEEEEEEHHHhhcccC-CCCcccEEEECCC-------CcEEEEEEEE
Confidence 9999999998 89999999999999975410 1123689999974 2999998865
No 15
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.79 E-value=1.1e-18 Score=169.28 Aligned_cols=130 Identities=25% Similarity=0.392 Sum_probs=102.6
Q ss_pred ccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeccccCCCCCeeccEEEEEeccCCCCeEEEEEEeC
Q 045512 37 EQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN------YKGIAKHLEKNQNPVWNQIFAFSKERLQSNLVEVTVKDK 110 (782)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~i~~t~nP~wne~f~f~~~~~~~~~L~v~V~d~ 110 (782)
...+.|.|+|++|++|+.++..|.+||||+|++++ .+++|+++++++||+|||+|.|.+... ...|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 35689999999999999999899999999999986 578999999999999999999998753 47899999999
Q ss_pred CCC-CCceeEEEEEEccccCCCCCC-CCCCCCeEEEeecCCCCcccceEEEEEEEEccc
Q 045512 111 DIG-KDDFVGRVTFDLFEVPHRVPP-DSPLAPQWYRLEDRKGDKITQGEIMLAVWIGTQ 167 (782)
Q Consensus 111 d~~-~d~~lG~~~i~l~~l~~~~~~-~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~~ 167 (782)
+.+ +|++||++.|+|.++...... +.....+||+|....+.....|+|++++.|.+.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 998 999999999999999875432 223345899998765443334999999998764
No 16
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.79 E-value=7.9e-19 Score=161.95 Aligned_cols=118 Identities=22% Similarity=0.378 Sum_probs=99.9
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeccccCCCCCeeccEEEEE-ec-
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKL-----GNYKGIAKHLEKNQNPVWNQIFAFS-KE- 96 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~i~~t~nP~wne~f~f~-~~- 96 (782)
+++..+.+.|+. ..+.|.|+|++|+||+. +..|.+||||++++ +..+++|+++++|+||+|||+|.|. +.
T Consensus 6 ~~~~~~~~~~~~--~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~ 82 (134)
T 2b3r_A 6 HGSGAVKLSVSY--RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSK 82 (134)
T ss_dssp -CCCEEEEEEEE--ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCH
T ss_pred cccEEEEEEEee--cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCH
Confidence 456678888888 45799999999999997 67899999999999 3467899999999999999999998 65
Q ss_pred -cCCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 045512 97 -RLQSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRK 149 (782)
Q Consensus 97 -~~~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
++....|.|+|||++.+ ++++||++.++|.++..+. ...+||+|.+..
T Consensus 83 ~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 132 (134)
T 2b3r_A 83 ETLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSK-----ETVKWYQLTAAT 132 (134)
T ss_dssp HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTS-----CEEEEEECBC--
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCC-----CcceeEECCCcc
Confidence 33568999999999998 8999999999999997643 267999998653
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=5.8e-19 Score=161.94 Aligned_cols=116 Identities=26% Similarity=0.500 Sum_probs=98.0
Q ss_pred ccCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeccccCCCCCeeccEEEEEec-
Q 045512 23 YRGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKL-----GNYKGIAKHLEKNQNPVWNQIFAFSKE- 96 (782)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~i~~t~nP~wne~f~f~~~- 96 (782)
+.|.+.+++.|+. ..+.|.|+|++|+||+.++..|.+||||++++ +..+++|+++++|.||+|||+|.|.+.
T Consensus 3 ~~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~ 80 (129)
T 2bwq_A 3 LSGQLSIKLWFDK--VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVH 80 (129)
T ss_dssp CCCEEEEEEEEET--TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCC
T ss_pred eeEEEEEEEEEcc--CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCC
Confidence 4677889999887 45799999999999999998999999999999 346889999999999999999999852
Q ss_pred --cCCCCeEEEEEEeCCCC-C--CceeEEEEEEccccCCCCCCCCCCCCeEEEee
Q 045512 97 --RLQSNLVEVTVKDKDIG-K--DDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLE 146 (782)
Q Consensus 97 --~~~~~~L~v~V~d~d~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 146 (782)
+.....|.|+|||++.. + +++||++.++|.++.... .++||+|+
T Consensus 81 ~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~Lq 129 (129)
T 2bwq_A 81 RREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQ 129 (129)
T ss_dssp GGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS------CEEEEECC
T ss_pred HHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc------CCccEECc
Confidence 33467999999999998 5 999999999999997642 67999984
No 18
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.79 E-value=3.6e-19 Score=164.94 Aligned_cols=124 Identities=27% Similarity=0.401 Sum_probs=107.1
Q ss_pred cccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeecccc-CCCCCeeccEEEEEeccCCCCeEEEEEEeCCCC-
Q 045512 36 VEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGIAKHLE-KNQNPVWNQIFAFSKERLQSNLVEVTVKDKDIG- 113 (782)
Q Consensus 36 ~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~i~-~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d~~- 113 (782)
..+.+.|.|+|++|++|+.++..|.+||||++++++++++|++++ ++.||+|||+|.|.+.+ ....|.|+|||++.+
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGT 84 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCT
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCC
Confidence 346789999999999999999889999999999999999999998 89999999999999987 568999999999998
Q ss_pred CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEEccc
Q 045512 114 KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWIGTQ 167 (782)
Q Consensus 114 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~~ 167 (782)
+|++||++.++|.++.... ....+||+|. ..+ .. .|+|++++.|.+.
T Consensus 85 ~d~~lG~~~i~l~~l~~~~----~~~~~w~~L~-~~~-~~-~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEG----SIPPTAYNVV-KDE-EY-KGEIWVALSFKPS 131 (136)
T ss_dssp TTCCSEEEEEESHHHHHHS----EEEEEEEEEE-ETT-EE-EEEEEEEEEEEEC
T ss_pred CCceEEEEEEEHHHhccCC----CCCcEEEEee-cCC-cc-CEEEEEEEEEEeC
Confidence 8999999999999995422 1256899998 332 23 3999999988754
No 19
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=1.1e-18 Score=162.77 Aligned_cols=120 Identities=30% Similarity=0.432 Sum_probs=104.2
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeccccCCCCCeeccEEEEEec---c
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLG---NYKGIAKHLEKNQNPVWNQIFAFSKE---R 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~---~~~~~T~~i~~t~nP~wne~f~f~~~---~ 97 (782)
.|...+++.|.. +.+.|.|+|++|++|+.++..|.+||||++++. .++++|+++++|.||+|||+|.|.+. +
T Consensus 12 ~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~ 89 (141)
T 2d8k_A 12 LGRIQFSVGYNF--QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEK 89 (141)
T ss_dssp CCEEEEEEEECS--SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHH
T ss_pred eeEEEEEEEEeC--CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHH
Confidence 577888888886 567999999999999999989999999999995 35889999999999999999999852 2
Q ss_pred CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCC
Q 045512 98 LQSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKG 150 (782)
Q Consensus 98 ~~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 150 (782)
.....|.|+|||++.+ ++++||++.+++.++..+. ...+||+|.....
T Consensus 90 ~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~~ 138 (141)
T 2d8k_A 90 VVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQ-----MQTFWKDLKPSGP 138 (141)
T ss_dssp HTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTS-----CEEEEECCEECCC
T ss_pred cccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCC-----CccEEEECcCCCC
Confidence 3467899999999998 8999999999999997753 2678999987654
No 20
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=1.2e-18 Score=164.83 Aligned_cols=123 Identities=21% Similarity=0.343 Sum_probs=99.9
Q ss_pred cCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECC------EEEeeccccCCCCCccccEEEEEEeCCCceEEEEE
Q 045512 363 KGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGN------KWIRTRTILDTLDPRWNEQYTWEVYDPCTVITIGV 435 (782)
Q Consensus 363 ~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~------~~~~T~~~~~t~nP~wne~~~f~v~~~~~~l~i~V 435 (782)
.+..+.|+|+|++|+||++++. .|. ||||++++++ ..+||+++++++||.|||.|.|.+......|.|+|
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V 92 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDI---LGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEV 92 (153)
T ss_dssp CTTCEEEEEEEEEEESCC----------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCC---CCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEE
Confidence 3556999999999999997653 366 9999999963 57899999999999999999999988778999999
Q ss_pred EeCCCCCCCCCCcCCCccEEEEEecccccCCcE------EEEEEEceeeCCCCCccccEEEEEEEE
Q 045512 436 FDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRL------YTHYYPLLVLTPSGLKKNGELHLALRF 495 (782)
Q Consensus 436 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~------~~~~~~L~~~~~~g~~~~G~i~l~~~~ 495 (782)
||++.++ +|++||++.|+|.++..+.. ..+||+|.....++ +..|+|+|++.|
T Consensus 93 ~d~d~~~------~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~ 151 (153)
T 3b7y_A 93 FDENRLT------RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTY 151 (153)
T ss_dssp EECCSSS------CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEE
T ss_pred EECCCCc------CCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEE
Confidence 9999876 89999999999999976542 25899997654333 446999999887
No 21
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=4.2e-19 Score=167.65 Aligned_cols=117 Identities=19% Similarity=0.229 Sum_probs=101.4
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---e---eeeeccccCCCCCeeccEEEEEecc
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN---Y---KGIAKHLEKNQNPVWNQIFAFSKER 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~---~---~~~T~~i~~t~nP~wne~f~f~~~~ 97 (782)
.|...+++.|+. ..+.|.|+|++|+||+++|..|.+||||++++.+ . ++||+++++|+||+|||+|.|.+..
T Consensus 29 ~G~l~~sl~y~~--~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 29 ATRIQIALKYDE--KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp CEEEEEEEEEET--TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred cEEEEEEEEEcC--CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 567888888877 5679999999999999999999999999999975 2 7899999999999999999999754
Q ss_pred --CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEee
Q 045512 98 --LQSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLE 146 (782)
Q Consensus 98 --~~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 146 (782)
+....|.|+|||+|.+ ++++||++.++|.++.... ....+||+|.
T Consensus 107 ~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~----~~~~~W~~L~ 154 (155)
T 2z0u_A 107 PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSG----ERSTRWYNLL 154 (155)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTC----CCEEEEEEEB
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCC----CccccceEcc
Confidence 2357899999999998 9999999999999996321 2367999985
No 22
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=1.8e-18 Score=163.47 Aligned_cols=118 Identities=31% Similarity=0.448 Sum_probs=103.3
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeccccCCCCCeeccEEEEEecc--C
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLG---NYKGIAKHLEKNQNPVWNQIFAFSKER--L 98 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~---~~~~~T~~i~~t~nP~wne~f~f~~~~--~ 98 (782)
.|...+++.|+. ..+.|.|+|++|+||+.++..+.+||||++++. .++++|+++++|.||+|||+|.|.+.. +
T Consensus 28 ~G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 105 (152)
T 1rsy_A 28 LGKLQYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSEL 105 (152)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHH
T ss_pred ceEEEEEEEEeC--CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHc
Confidence 567888888887 567999999999999999989999999999994 468899999999999999999998753 2
Q ss_pred CCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecC
Q 045512 99 QSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDR 148 (782)
Q Consensus 99 ~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (782)
....|.|+|||++.+ ++++||++.++|.++..+. ...+||+|.+.
T Consensus 106 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~ 151 (152)
T 1rsy_A 106 GGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSA 151 (152)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSS-----CEEEEEECBCC
T ss_pred CCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCC-----CcceEEECCCC
Confidence 468899999999998 8999999999999997653 26799999764
No 23
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=4e-19 Score=165.98 Aligned_cols=117 Identities=35% Similarity=0.536 Sum_probs=102.0
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe--------------eeeeccccCCCCCeecc
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNY--------------KGIAKHLEKNQNPVWNQ 89 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~--------------~~~T~~i~~t~nP~wne 89 (782)
.|.+.+++.|+ .+.|.|+|++|+||+.+|..|.+||||++++++. +++|+++++|+||+|||
T Consensus 6 ~G~i~~~l~y~----~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne 81 (142)
T 1rh8_A 6 TGEIQLQINYD----LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQ 81 (142)
T ss_dssp CCEEEEEEEEE----TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEE
T ss_pred ceEEEEEEEEc----CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCC
Confidence 56788999998 5799999999999999999999999999999863 57999999999999999
Q ss_pred EEEEE-ec--cCCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 045512 90 IFAFS-KE--RLQSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRK 149 (782)
Q Consensus 90 ~f~f~-~~--~~~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
+|.|. +. ++....|.|+|||++.+ ++++||++.++|.++.... ..++||+|.+..
T Consensus 82 ~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 140 (142)
T 1rh8_A 82 TVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLD-----NTPRWYPLKEQT 140 (142)
T ss_dssp EEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGT-----TCCEEEECBCCC
T ss_pred EEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCC-----CCCeEEECCccC
Confidence 99997 43 33467999999999998 8999999999999987643 267999998754
No 24
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.78 E-value=9.2e-19 Score=159.90 Aligned_cols=114 Identities=24% Similarity=0.391 Sum_probs=98.1
Q ss_pred ccEEEEEEEEeecCCCC---CCCCCCCcEEEEEECC---eeeeeccccCCCCCeeccEEEEEeccCCCCeEEEEEEeCCC
Q 045512 39 MHYLFVNVVKARNLPVM---DVSGSLDPYVEVKLGN---YKGIAKHLEKNQNPVWNQIFAFSKERLQSNLVEVTVKDKDI 112 (782)
Q Consensus 39 ~~~L~V~v~~a~~L~~~---d~~g~~dPyv~v~~~~---~~~~T~~i~~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d~ 112 (782)
.+.|.|+|++|++|+.+ +..|.+||||++++++ ++++|+++++|+||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 36899999999999984 5568999999999986 68899999999999999999999976667899999999998
Q ss_pred CCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEE
Q 045512 113 GKDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAV 162 (782)
Q Consensus 113 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~ 162 (782)
.++++||++.++|.++..+. ....|++|... + .|+|++++
T Consensus 82 ~~~~~iG~~~i~l~~l~~~~-----~~~~~~~L~~~-~----~g~i~~~l 121 (126)
T 1rlw_A 82 VMDETLGTATFTVSSMKVGE-----KKEVPFIFNQV-T----EMVLEMSL 121 (126)
T ss_dssp SCCEEEEEEEEEGGGSCTTC-----EEEEEEEETTT-E----EEEEEEEE
T ss_pred CCCceeEEEEEEHHHccCCC-----cEEEEEEcCCC-c----eEEEEEEE
Confidence 88999999999999997643 25789999752 1 27777765
No 25
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=1.1e-18 Score=162.85 Aligned_cols=120 Identities=25% Similarity=0.486 Sum_probs=104.0
Q ss_pred ccCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeccccCCCCCeeccEEEEEe-c
Q 045512 23 YRGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKL-----GNYKGIAKHLEKNQNPVWNQIFAFSK-E 96 (782)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~i~~t~nP~wne~f~f~~-~ 96 (782)
..|.+.+++.|+. ..+.|.|+|++|++|+.++..|.+||||++++ +.++++|+++++|+||+|||+|.|.+ .
T Consensus 6 ~~G~i~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 83 (141)
T 1v27_A 6 SGGQLSIKLWFDK--VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVH 83 (141)
T ss_dssp CCCEEEEEEEEET--TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCC
T ss_pred cccEEEEEEEEeC--CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCC
Confidence 3678899999886 45799999999999999999999999999999 34688999999999999999999984 2
Q ss_pred --cCCCCeEEEEEEeCCCC-C--CceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCC
Q 045512 97 --RLQSNLVEVTVKDKDIG-K--DDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKG 150 (782)
Q Consensus 97 --~~~~~~L~v~V~d~d~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 150 (782)
++....|.|+|||++.+ + +++||++.++|.++.... ..+||+|.+.+.
T Consensus 84 ~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~L~~~~~ 136 (141)
T 1v27_A 84 RREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQTHDS 136 (141)
T ss_dssp TTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS------EEEEEECBCCSS
T ss_pred HHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC------CCceEECccccc
Confidence 33458999999999998 5 999999999999987532 579999987654
No 26
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.77 E-value=1.3e-18 Score=161.06 Aligned_cols=117 Identities=21% Similarity=0.327 Sum_probs=99.7
Q ss_pred cccEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCee-eeeccccCCCCCeeccEEEEEeccCCCCeEEE
Q 045512 38 QMHYLFVNVVKARNLPVMDVSGS-----------LDPYVEVKLGNYK-GIAKHLEKNQNPVWNQIFAFSKERLQSNLVEV 105 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~-----------~dPyv~v~~~~~~-~~T~~i~~t~nP~wne~f~f~~~~~~~~~L~v 105 (782)
..+.|.|+|++|++|+++|..+. +||||++.++++. .+|+++.+|+||+|||+|.|.+.+. ..|.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~ 81 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIEL 81 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEE
Confidence 35789999999999998875443 9999999998864 6999999999999999999998764 78999
Q ss_pred EEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEEcc
Q 045512 106 TVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWIGT 166 (782)
Q Consensus 106 ~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 166 (782)
+|||+|.+ +|++||++.+++.++..+.. .....|++|+. .|+|++++.+.+
T Consensus 82 ~V~d~d~~~~dd~iG~~~i~l~~l~~~~~---~~~~~w~~L~~-------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 82 AVFHDAPIGYDDFVANCTIQFEELLQNGS---RHFEDWIDLEP-------EGKVYVIIDLSG 133 (136)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHTSTTC---SEEEEEEECBS-------SCEEEEEEEEEE
T ss_pred EEEeCCCCCCCCEEEEEEEEHHHhcccCC---CCccEEEEcCC-------CeEEEEEEEEEe
Confidence 99999988 89999999999999987532 12478999964 299999998753
No 27
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.77 E-value=1.9e-18 Score=161.58 Aligned_cols=117 Identities=31% Similarity=0.452 Sum_probs=102.4
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeeeeeccccCCCCCeeccEEEEEecc--C
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKL---GNYKGIAKHLEKNQNPVWNQIFAFSKER--L 98 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~---~~~~~~T~~i~~t~nP~wne~f~f~~~~--~ 98 (782)
.|...+++.|+. ..+.|.|+|++|++|+.++..+.+||||++++ +.++++|+++++|.||+|||+|.|.+.. +
T Consensus 20 ~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 97 (143)
T 3f04_A 20 LGKLQYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSEL 97 (143)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHH
T ss_pred eEEEEEEEEEeC--CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhc
Confidence 467788888876 56799999999999999998899999999999 3468899999999999999999998763 3
Q ss_pred CCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeec
Q 045512 99 QSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLED 147 (782)
Q Consensus 99 ~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~ 147 (782)
....|.|+|||++.+ ++++||++.++|.++..+.. ..+||+|..
T Consensus 98 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~-----~~~W~~L~~ 142 (143)
T 3f04_A 98 GGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHV-----TEEWRDLQS 142 (143)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSC-----EEEEEECBC
T ss_pred CCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCC-----cceEEECcC
Confidence 458999999999998 99999999999999976542 679999975
No 28
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1.7e-18 Score=166.47 Aligned_cols=126 Identities=16% Similarity=0.144 Sum_probs=102.7
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEeccCCCCeEEEEEEeCCCC-CCc
Q 045512 38 QMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGIAKHLEKNQNPVWNQIFAFSKERLQSNLVEVTVKDKDIG-KDD 116 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~i~~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d~~-~d~ 116 (782)
..+.|.|+|++|++|+..+..+.+||||+|++++++++|+++++|+||+|||+|.|.+.. ...|.|+|||+|.+ +|+
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~dd 111 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKSDV 111 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSCCE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCCCc
Confidence 457899999999999944435569999999999999999999999999999999999864 68999999999998 999
Q ss_pred eeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEEc
Q 045512 117 FVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWIG 165 (782)
Q Consensus 117 ~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 165 (782)
+||++.++|.++.............|++|...++.....|+|.+++.+.
T Consensus 112 ~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGL 160 (173)
T ss_dssp EEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESE
T ss_pred eEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeee
Confidence 9999999999987543221112367999988653332349999998665
No 29
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=1.6e-18 Score=158.25 Aligned_cols=116 Identities=19% Similarity=0.253 Sum_probs=96.6
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECC---EEEeeccccCCCCCccccEEEEEEeC-CCceEEEEEEeCCC
Q 045512 366 IGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGN---KWIRTRTILDTLDPRWNEQYTWEVYD-PCTVITIGVFDNCH 440 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~---~~~~T~~~~~t~nP~wne~~~f~v~~-~~~~l~i~V~d~~~ 440 (782)
.|.|.|+|++|+||++++..+..|. ||||++++++ +.+||+++++++||+|||.|.|.+.. ....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 4889999999999997521123466 9999999985 78999999999999999999999964 45689999999986
Q ss_pred CCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceeeCCCCCccccEEEEEEE
Q 045512 441 VNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVLTPSGLKKNGELHLALR 494 (782)
Q Consensus 441 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~ 494 (782)
+ +|++||++.|+|+++..+.....|++|.. ...|.|+++++
T Consensus 82 ~-------~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le 122 (126)
T 1rlw_A 82 V-------MDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLE 122 (126)
T ss_dssp S-------CCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEE
T ss_pred C-------CCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEE
Confidence 4 58899999999999999999999999963 22366666554
No 30
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.76 E-value=3.5e-18 Score=158.17 Aligned_cols=118 Identities=19% Similarity=0.362 Sum_probs=99.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCC--------CC-CCcEEEEEECCEE-EeeccccCCCCCccccEEEEEEeCCCceEEEEE
Q 045512 366 IGILELGILSAKNLMPMTSKDG--------KL-TDAYCVAKYGNKW-IRTRTILDTLDPRWNEQYTWEVYDPCTVITIGV 435 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~--------~~-~dpyv~v~~~~~~-~~T~~~~~t~nP~wne~~~f~v~~~~~~l~i~V 435 (782)
.|.|+|+|++|+||+++|.... .+ +||||++++++.. .+|+++++++||.|||.|+|.+.+. ..|.|+|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V 83 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAV 83 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEEE
Confidence 4899999999999998763210 12 4999999998865 6999999999999999999999876 8999999
Q ss_pred EeCCCCCCCCCCcCCCccEEEEEecccccCC--cEEEEEEEceeeCCCCCccccEEEEEEEEEEC
Q 045512 436 FDNCHVNGSKDDAIDQRIGKVRIRLSTLETD--RLYTHYYPLLVLTPSGLKKNGELHLALRFTCT 498 (782)
Q Consensus 436 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~--~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~ 498 (782)
||++.++ +|++||++.|+|+++..+ ...+.|++|.. .|+|+|+++|...
T Consensus 84 ~d~d~~~------~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--------~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 84 FHDAPIG------YDDFVANCTIQFEELLQNGSRHFEDWIDLEP--------EGKVYVIIDLSGS 134 (136)
T ss_dssp EECCSSS------SCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--------SCEEEEEEEEEEE
T ss_pred EeCCCCC------CCCEEEEEEEEHHHhcccCCCCccEEEEcCC--------CeEEEEEEEEEec
Confidence 9999876 899999999999999764 45689999852 5999999998653
No 31
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.76 E-value=4.7e-18 Score=164.73 Aligned_cols=124 Identities=21% Similarity=0.342 Sum_probs=98.6
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECC------EEEeeccccCCCCCccccEEEEEEeCCCceEEEEEE
Q 045512 364 GSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGN------KWIRTRTILDTLDPRWNEQYTWEVYDPCTVITIGVF 436 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~------~~~~T~~~~~t~nP~wne~~~f~v~~~~~~l~i~V~ 436 (782)
...|.|+|+|++|+||++++. .|. ||||++++++ ..++|+++++++||.|||.|.|.+......|.|+||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~---~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~ 81 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDI---LGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVF 81 (176)
T ss_dssp TTCEEEEEEEEEEESCC---C---CCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcCC---CCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEE
Confidence 456999999999999997754 366 9999999975 678999999999999999999999977779999999
Q ss_pred eCCCCCCCCCCcCCCccEEEEEecccccCCcEE-E-----EEEEceeeCCCCCccccEEEEEEEEEE
Q 045512 437 DNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLY-T-----HYYPLLVLTPSGLKKNGELHLALRFTC 497 (782)
Q Consensus 437 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~L~~~~~~g~~~~G~i~l~~~~~~ 497 (782)
|++.++ +|++||++.|+|.++..+... . .||+|.....++ +..|+|+|++.|.+
T Consensus 82 d~d~~~------~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 82 DENRLT------RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLP 141 (176)
T ss_dssp ECC----------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEECC
T ss_pred ECCCCC------CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEEEe
Confidence 999876 899999999999999776433 2 799998755433 34699999998844
No 32
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.76 E-value=1.5e-18 Score=163.18 Aligned_cols=122 Identities=16% Similarity=0.200 Sum_probs=103.4
Q ss_pred ccCCceeEEEecccccccEEEEEEEEeecCCCCC-CCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEec
Q 045512 23 YRGGDKTASSYDLVEQMHYLFVNVVKARNLPVMD-VSGSLDPYVEVKLGN-----YKGIAKHLEKNQNPVWNQIFAFSKE 96 (782)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d-~~g~~dPyv~v~~~~-----~~~~T~~i~~t~nP~wne~f~f~~~ 96 (782)
+.|.+.+++.|+. ..+.|.|+|++|+||+.++ ..|.+||||++++.+ .+++|+++++|+||+|||+|.|.+.
T Consensus 8 ~~G~l~~sl~y~~--~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 85 (148)
T 3fdw_A 8 VTGRIAFSLKYEQ--QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIP 85 (148)
T ss_dssp CCCEEEEEEEEET--TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECC
T ss_pred cceEEEEEEEEeC--CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeC
Confidence 4677888888887 5679999999999999988 579999999999973 4789999999999999999999976
Q ss_pred cC--CCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCC
Q 045512 97 RL--QSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGD 151 (782)
Q Consensus 97 ~~--~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~ 151 (782)
.. ....|.|+|||++.+ ++++||++.++|.++..+.. ..+||+|.++.+.
T Consensus 86 ~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~-----~~~W~~L~~~~~~ 138 (148)
T 3fdw_A 86 ESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKK-----LDHCLPLHGKISA 138 (148)
T ss_dssp STTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCC-----SEEEEECBCC---
T ss_pred hhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCC-----ccceEECcCcccc
Confidence 43 356799999999998 89999999999999976532 5699999876543
No 33
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=8e-18 Score=156.11 Aligned_cols=117 Identities=18% Similarity=0.239 Sum_probs=99.7
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---C-eeeeeccccCCCCCeeccEEEEEecc--
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLG---N-YKGIAKHLEKNQNPVWNQIFAFSKER-- 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~---~-~~~~T~~i~~t~nP~wne~f~f~~~~-- 97 (782)
.|...+++.|+. ..+.|.|+|++|+ ++|..|.+||||++++. + .+++|+++++|+||+|||+|.|.+..
T Consensus 12 ~G~l~~sl~y~~--~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~ 86 (138)
T 1wfm_A 12 APKLHYCLDYDC--QKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEE 86 (138)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTS
T ss_pred ceEEEEEEEEeC--CCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHH
Confidence 577899999987 4579999999999 36778999999999994 2 36899999999999999999999754
Q ss_pred CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCC
Q 045512 98 LQSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKG 150 (782)
Q Consensus 98 ~~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 150 (782)
+....|.|+|||+|.+ +|++||++.++|.++.... ...+|++|.....
T Consensus 87 l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 87 LPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPL-----GAAQWGELKTSGP 135 (138)
T ss_dssp STTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCT-----TCCEEEECCCCSC
T ss_pred cCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcc-----cccceeeCcCCCc
Confidence 3457899999999998 9999999999999996532 3679999987643
No 34
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.75 E-value=6.7e-18 Score=155.47 Aligned_cols=120 Identities=17% Similarity=0.237 Sum_probs=99.5
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC--eeeeeccccCCCCCeeccEEEEEeccCCCCeEEEEEEeCCCC-C-
Q 045512 39 MHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN--YKGIAKHLEKNQNPVWNQIFAFSKERLQSNLVEVTVKDKDIG-K- 114 (782)
Q Consensus 39 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~--~~~~T~~i~~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d~~-~- 114 (782)
...|.|+|++|++|+.+|..|.+||||++++++ +.++|+++++|+||+|||+|.|.+... ..|.|+|||++.. +
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCC
Confidence 457999999999999999999999999999975 789999999999999999999998774 3599999999988 4
Q ss_pred --CceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCC--CcccceEEEEEEEE
Q 045512 115 --DDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKG--DKITQGEIMLAVWI 164 (782)
Q Consensus 115 --d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~--~~~~~G~l~l~~~~ 164 (782)
|++||++.+++.++..... ...+|++|....+ .....|+|.+++..
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~----~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKD----TGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTT----SCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccc----cCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 8999999999998843221 1358999987632 22224999998853
No 35
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.75 E-value=7e-18 Score=159.52 Aligned_cols=119 Identities=21% Similarity=0.355 Sum_probs=101.5
Q ss_pred ccCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEe--
Q 045512 23 YRGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGIAKHLEKNQNPVWNQIFAFSK-- 95 (782)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~i~~t~nP~wne~f~f~~-- 95 (782)
..|...+++.|+. ..+.|.|+|++|+||+..+ .|.+||||++++.+ .+++|+++++|+||+|||+|.|.+
T Consensus 12 ~~G~~~lsL~y~~--~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 88 (153)
T 3fbk_A 12 VQGAGQLRLSIDA--QDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQE 88 (153)
T ss_dssp -CCCCEEEEEEEE--SSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCG
T ss_pred CCCEEEEEEEEEC--CCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEeccc
Confidence 3678899999988 5579999999999999998 69999999999943 578999999999999999999998
Q ss_pred ccCCCCeEEEEEEeCCCC-C-CceeEEEEEEccccCC-CCCCCCCCCCeEEEeecCCC
Q 045512 96 ERLQSNLVEVTVKDKDIG-K-DDFVGRVTFDLFEVPH-RVPPDSPLAPQWYRLEDRKG 150 (782)
Q Consensus 96 ~~~~~~~L~v~V~d~d~~-~-d~~lG~~~i~l~~l~~-~~~~~~~~~~~w~~L~~~~~ 150 (782)
.+.. ..|.|+|||++.+ + |++||++.++|.++.. +. ...+||+|.+...
T Consensus 89 ~~~~-~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~-----~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 89 EDDQ-KRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDK-----EISGWYYLLGEHL 140 (153)
T ss_dssp GGTT-SEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--C-----CEEEEEECBCTTG
T ss_pred HHhC-CEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCC-----ccccEEECCChhh
Confidence 4443 5699999999997 5 9999999999999974 22 2679999987653
No 36
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=5.7e-18 Score=158.06 Aligned_cols=121 Identities=28% Similarity=0.324 Sum_probs=102.1
Q ss_pred ccCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEecc
Q 045512 23 YRGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGIAKHLEKNQNPVWNQIFAFSKER 97 (782)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~i~~t~nP~wne~f~f~~~~ 97 (782)
..|.+.+++.|+. ..+.|.|+|++|+||+.++..| +||||++++.+ .+++|+++++|+||+|||+|.|.+..
T Consensus 9 ~~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 85 (142)
T 2dmg_A 9 PLGQIQLTIRHSS--QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSL 85 (142)
T ss_dssp SSCEEEEEEEEET--TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred CcceEEEEEEEeC--CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecH
Confidence 3577888888876 5679999999999999999888 99999999943 57899999999999999999999743
Q ss_pred --CCCCeEEEEEEeCCCC-C--CceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCC
Q 045512 98 --LQSNLVEVTVKDKDIG-K--DDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGD 151 (782)
Q Consensus 98 --~~~~~L~v~V~d~d~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~ 151 (782)
+....|.|+|||++.+ + +++||++.++|.++.... ...+||+|.+..+.
T Consensus 86 ~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~-----~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 86 PEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAK-----GWTQWYDLTEDSGP 139 (142)
T ss_dssp HHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTT-----CBCCBCCCBCSCSC
T ss_pred HHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccc-----cccceeeccCCCCC
Confidence 2346899999999987 3 479999999999987653 26789999876543
No 37
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.74 E-value=6.3e-18 Score=156.75 Aligned_cols=116 Identities=32% Similarity=0.514 Sum_probs=101.2
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeccccCCCCCeeccEEEEEeccC
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKL-----GNYKGIAKHLEKNQNPVWNQIFAFSKERL 98 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~i~~t~nP~wne~f~f~~~~~ 98 (782)
.|.+.+++.| ..+.|.|+|++|++|+.++..|.+||||++++ +..+++|+++++|.||+|||+|.|.+...
T Consensus 4 ~G~l~~~l~~----~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 79 (137)
T 3rdl_A 4 RGRIYLKAEV----TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPS 79 (137)
T ss_dssp CCEEEEEEEE----ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred ceEEEEEEEE----cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCch
Confidence 4678888888 34899999999999999999999999999999 45688999999999999999999998643
Q ss_pred -CCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 045512 99 -QSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRK 149 (782)
Q Consensus 99 -~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
....|.|+|||++.. ++++||++.++|.++.... ..+||+|.+.+
T Consensus 80 ~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~~ 126 (137)
T 3rdl_A 80 DKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP------ASGWYKLLNQE 126 (137)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC------EEEEEECBCHH
T ss_pred hcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc------cCceEECcCcc
Confidence 235899999999998 8999999999999997542 57999998654
No 38
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.74 E-value=8.1e-18 Score=157.03 Aligned_cols=118 Identities=27% Similarity=0.413 Sum_probs=101.7
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEE-ecc
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGIAKHLEKNQNPVWNQIFAFS-KER 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~i~~t~nP~wne~f~f~-~~~ 97 (782)
.|...+++.|+. ..+.|.|+|++|++|+.++..|.+||||++++++ .+++|+++++|.||+|||+|.|. +..
T Consensus 15 ~G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 92 (142)
T 2chd_A 15 LGALEFSLLYDQ--DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITE 92 (142)
T ss_dssp CCEEEEEEEEEG--GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCH
T ss_pred cceEEEEEEEeC--CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCH
Confidence 577889999885 6689999999999999999899999999999975 68899999999999999999998 532
Q ss_pred --CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecC
Q 045512 98 --LQSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDR 148 (782)
Q Consensus 98 --~~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (782)
+....|.|+|||++.+ ++++||++.++|.++..+.. ...|++|+.+
T Consensus 93 ~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~-----~~~~~~L~~p 141 (142)
T 2chd_A 93 EDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQR-----KNFNICLERV 141 (142)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCC-----EEEEEECBCC
T ss_pred HHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCc-----cEEEEecccC
Confidence 2247899999999998 89999999999999987542 5577887653
No 39
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=1.3e-17 Score=154.79 Aligned_cols=121 Identities=22% Similarity=0.272 Sum_probs=102.1
Q ss_pred ccCCceeEEEecccccccEEEEEEEEeecCCCCCCC-CCCCcEEEEEECC---eeeeeccccCCCCCeeccEEEEE-ecc
Q 045512 23 YRGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVS-GSLDPYVEVKLGN---YKGIAKHLEKNQNPVWNQIFAFS-KER 97 (782)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~-g~~dPyv~v~~~~---~~~~T~~i~~t~nP~wne~f~f~-~~~ 97 (782)
..|...+++.|+. ..+.|.|+|++|+||+.+|.. |.+||||++++.+ ++++|+++++|+||+|||+|.|. +..
T Consensus 7 ~~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~ 84 (138)
T 1ugk_A 7 GLGTLFFSLEYNF--ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPY 84 (138)
T ss_dssp CCCEEEEEEEEEG--GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCS
T ss_pred ccEEEEEEEEEEC--CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCH
Confidence 3577888888876 567999999999999999985 8999999999964 68899999999999999999995 542
Q ss_pred --CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 045512 98 --LQSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRK 149 (782)
Q Consensus 98 --~~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
+....|.|+|||++.+ ++++||++.++|.++..... ....|++|...+
T Consensus 85 ~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~----~~~~~~~l~~~~ 135 (138)
T 1ugk_A 85 TQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEG----KMLMNREIISGP 135 (138)
T ss_dssp TTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTC----CEEEEEECBSSS
T ss_pred HHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCC----cchhhhhhhcCC
Confidence 3457899999999998 89999999999999977532 235678987654
No 40
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.3e-17 Score=157.09 Aligned_cols=116 Identities=31% Similarity=0.513 Sum_probs=100.5
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEeccC
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGIAKHLEKNQNPVWNQIFAFSKERL 98 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~i~~t~nP~wne~f~f~~~~~ 98 (782)
.|...+++.|. .+.|.|+|++|++|+.++..+.+||||+|++++ .+++|+++++|+||+|||+|.|.+...
T Consensus 19 ~G~l~~~l~~~----~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 94 (149)
T 1a25_A 19 RGRIYIQAHID----REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKES 94 (149)
T ss_dssp TCEEEEEEEES----SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSG
T ss_pred ceEEEEEEEec----CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccc
Confidence 46777888773 468999999999999999899999999999973 578999999999999999999998653
Q ss_pred -CCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 045512 99 -QSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRK 149 (782)
Q Consensus 99 -~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
....|.|+|||++.+ ++++||++.++|.++.... ..+||+|.+.+
T Consensus 95 ~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~~ 141 (149)
T 1a25_A 95 DKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG------VDGWFKLLSQE 141 (149)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTCC------EEEEEECBCHH
T ss_pred cCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcCc------cCCeEEccCCC
Confidence 246899999999998 8999999999999997642 57899998653
No 41
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.74 E-value=8e-18 Score=162.13 Aligned_cols=116 Identities=24% Similarity=0.302 Sum_probs=100.3
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCC-CCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEecc
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDV-SGSLDPYVEVKLGN-----YKGIAKHLEKNQNPVWNQIFAFSKER 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~-~g~~dPyv~v~~~~-----~~~~T~~i~~t~nP~wne~f~f~~~~ 97 (782)
.|.+.+++.| ..+.|.|+|++|+||+.+|. .|.+||||+|++.+ .+++|+++++|+||+|||+|.|.+..
T Consensus 18 ~G~l~~~l~y----~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (171)
T 2q3x_A 18 MGDIQIGMED----KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP 93 (171)
T ss_dssp CCEEEEEEEE----ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC
T ss_pred ccEEEEEEEE----CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC
Confidence 4678888888 46799999999999999985 79999999999974 37899999999999999999999865
Q ss_pred CCCCeEEEEEE-eCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 045512 98 LQSNLVEVTVK-DKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRK 149 (782)
Q Consensus 98 ~~~~~L~v~V~-d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
....|.|+|| |+|.+ +|++||++.++|.++..+. ...+||+|....
T Consensus 94 -~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 141 (171)
T 2q3x_A 94 -QGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSS-----MVIGWYKLFPPS 141 (171)
T ss_dssp -TTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTS-----CEEEEEECBCGG
T ss_pred -CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCC-----CcceeEECCCcc
Confidence 4688999999 99998 8999999999999998643 267999998764
No 42
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=4.4e-17 Score=151.79 Aligned_cols=119 Identities=19% Similarity=0.272 Sum_probs=101.1
Q ss_pred eecceEEEEEEeccccccCCCCCCCCCCCCccccccccCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEEC---CE
Q 045512 326 KFSSKILIRFCLEAGYHVLDESTHFSSDLQPSSMSLRKGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYG---NK 401 (782)
Q Consensus 326 ~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~---~~ 401 (782)
...|+|.+++.+. +..+.|.|+|++|+||++++. .|. ||||++++. ..
T Consensus 10 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~~ 61 (141)
T 2d8k_A 10 ENLGRIQFSVGYN-------------------------FQESTLTVKIMKAQELPAKDF---SGTSDPFVKIYLLPDKKH 61 (141)
T ss_dssp CCCCEEEEEEEEC-------------------------SSSCCEEEEEEEEESCCCCSS---SSCCCEEEEEEEESCCSS
T ss_pred ceeeEEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCCCC---CCCCCcEEEEEEECCCCc
Confidence 3468998888642 345889999999999997753 366 999999994 46
Q ss_pred EEeeccccCCCCCccccEEEEEEeC----CCceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEcee
Q 045512 402 WIRTRTILDTLDPRWNEQYTWEVYD----PCTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLV 477 (782)
Q Consensus 402 ~~~T~~~~~t~nP~wne~~~f~v~~----~~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 477 (782)
.+||+++++++||+|||.|.|.+.. ....|.|+|||++.++ +|++||++.|+|.++..+.....||+|..
T Consensus 62 ~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 62 KLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFS------RNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp EEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSS------SCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred cEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCC------CCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 8999999999999999999998632 2568999999999876 89999999999999998888899999986
Q ss_pred e
Q 045512 478 L 478 (782)
Q Consensus 478 ~ 478 (782)
.
T Consensus 136 ~ 136 (141)
T 2d8k_A 136 S 136 (141)
T ss_dssp C
T ss_pred C
Confidence 4
No 43
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.73 E-value=2.5e-17 Score=156.81 Aligned_cols=122 Identities=30% Similarity=0.326 Sum_probs=101.1
Q ss_pred ccCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEecc
Q 045512 23 YRGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGIAKHLEKNQNPVWNQIFAFSKER 97 (782)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~i~~t~nP~wne~f~f~~~~ 97 (782)
..|...+++.|.. ..+.|.|+|++|+||+.++..|.+||||++++++ .+++|+++++|+||+|||+|.|.+..
T Consensus 10 ~~G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 87 (159)
T 1tjx_A 10 KLGDICFSLRYVP--TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPF 87 (159)
T ss_dssp CCCEEEEEEEEET--TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred cCCeEEEEEEEcC--CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCH
Confidence 3677888888877 5679999999999999999899999999999963 47899999999999999999999754
Q ss_pred --CCCCeEEEEEEeCCCC-CCceeEEEEEEcccc----------CCCCCCCCCCCCeEEEeecCC
Q 045512 98 --LQSNLVEVTVKDKDIG-KDDFVGRVTFDLFEV----------PHRVPPDSPLAPQWYRLEDRK 149 (782)
Q Consensus 98 --~~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l----------~~~~~~~~~~~~~w~~L~~~~ 149 (782)
+....|.|+|||++.+ ++++||++.|++..+ .... .....+||+|....
T Consensus 88 ~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~---~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 88 EQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANP---RRPIAQWHTLQVEE 149 (159)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHST---TCCEEEEEECBCHH
T ss_pred HHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCC---CCeeeeEEECcCcc
Confidence 2356899999999998 899999999999854 2111 12357899997643
No 44
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.5e-17 Score=156.10 Aligned_cols=120 Identities=27% Similarity=0.303 Sum_probs=101.2
Q ss_pred ccCCceeEEEecccccccEEEEEEEEeecCCCC-CCC------CCCCcEEEEEECC---eeeeeccccCCCCCeeccEEE
Q 045512 23 YRGGDKTASSYDLVEQMHYLFVNVVKARNLPVM-DVS------GSLDPYVEVKLGN---YKGIAKHLEKNQNPVWNQIFA 92 (782)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~-d~~------g~~dPyv~v~~~~---~~~~T~~i~~t~nP~wne~f~ 92 (782)
..|.+.+++.|+. ..+.|.|+|++|+||+.+ +.+ |.+||||+|++.+ ++++|+++++|.||+|||+|.
T Consensus 11 ~~G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~ 88 (147)
T 2enp_A 11 QLGMLHFSTQYDL--LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYT 88 (147)
T ss_dssp CCCEEEEEEEEET--TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCE
T ss_pred cceEEEEEEEEcC--CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEE
Confidence 4678899999887 567999999999999984 433 5899999999973 578999999999999999999
Q ss_pred EEecc--CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 045512 93 FSKER--LQSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRK 149 (782)
Q Consensus 93 f~~~~--~~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
|.+.. +....|.|+|||++.+ ++++||++.++|.++..... ...|+.|....
T Consensus 89 f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~-----~~~w~~L~~~~ 143 (147)
T 2enp_A 89 FEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKG-----GHWWKALIPSG 143 (147)
T ss_dssp ECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTC-----CCEEECCBCCC
T ss_pred EEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCC-----ccEEEEeecCC
Confidence 98753 2346899999999998 89999999999999976432 46899998653
No 45
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=2.5e-17 Score=155.61 Aligned_cols=105 Identities=23% Similarity=0.304 Sum_probs=92.1
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEE---CCEEEeeccccCCCCCccccEEEEEEeC---CCceEEEEEE
Q 045512 364 GSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKY---GNKWIRTRTILDTLDPRWNEQYTWEVYD---PCTVITIGVF 436 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~---~~~~~~T~~~~~t~nP~wne~~~f~v~~---~~~~l~i~V~ 436 (782)
+..+.|.|+|++|+||++++. .+. ||||++++ +.+.+||+++++++||+|||.|.|.+.. ....|.|+||
T Consensus 39 ~~~~~L~V~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 115 (152)
T 1rsy_A 39 FQNNQLLVGIIQAAELPALDM---GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVY 115 (152)
T ss_dssp TTTTEEEEEEEEEESCCCCST---TSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCccC---CCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEE
Confidence 345899999999999997753 366 99999999 3567899999999999999999999864 2578999999
Q ss_pred eCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEcee
Q 045512 437 DNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLV 477 (782)
Q Consensus 437 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 477 (782)
|++.++ +|++||++.|+|.++..+....+||+|..
T Consensus 116 d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 116 DFDRFS------KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp ECCSSS------CCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred ECCCCC------CCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 999876 79999999999999988888899999974
No 46
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.72 E-value=3.4e-17 Score=150.74 Aligned_cols=123 Identities=24% Similarity=0.303 Sum_probs=97.1
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECC--EEEeeccccCCCCCccccEEEEEEeCCCceEEEEEEeCCCCC
Q 045512 366 IGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGN--KWIRTRTILDTLDPRWNEQYTWEVYDPCTVITIGVFDNCHVN 442 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~--~~~~T~~~~~t~nP~wne~~~f~v~~~~~~l~i~V~d~~~~~ 442 (782)
...|+|+|++|++|+++|. .|. ||||++++++ +.++|+++++++||.|||.|.|.+.++. .|.|+|||++.++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~---~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDF---FRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIH 79 (132)
T ss_dssp EEEEEEEEEEEESCCCCST---TCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTT
T ss_pred eEEEEEEEEEeECCCCCCC---CCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCC
Confidence 3679999999999998764 366 9999999974 7899999999999999999999998764 5999999999875
Q ss_pred CCCCCcCCCccEEEEEecccc-cCCcEEEEEEEceeeCCCC-CccccEEEEEEEE
Q 045512 443 GSKDDAIDQRIGKVRIRLSTL-ETDRLYTHYYPLLVLTPSG-LKKNGELHLALRF 495 (782)
Q Consensus 443 ~~~~~~~d~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~g-~~~~G~i~l~~~~ 495 (782)
+...|++||++.|+++++ ........|++|....+.+ .+..|+|++++..
T Consensus 80 ---~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 ---KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp ---SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred ---CCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 111389999999999988 2222224789998754322 2347999998753
No 47
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.72 E-value=5.6e-17 Score=155.56 Aligned_cols=103 Identities=27% Similarity=0.445 Sum_probs=92.0
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEecc-
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGIAKHLEKNQNPVWNQIFAFSKER- 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~i~~t~nP~wne~f~f~~~~- 97 (782)
.|...+++.|.. ..+.|.|+|++|+||+.++..|.+||||++++++ .+++|+++++|+||+|||+|.|.+..
T Consensus 23 ~G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 100 (166)
T 2cm5_A 23 RGKILVSLMYST--QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHS 100 (166)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred cceEEEEEEEEC--CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchH
Confidence 566778888776 5679999999999999999899999999999986 58899999999999999999999854
Q ss_pred -CCCCeEEEEEEeCCCC-CCceeEEEEEEcccc
Q 045512 98 -LQSNLVEVTVKDKDIG-KDDFVGRVTFDLFEV 128 (782)
Q Consensus 98 -~~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l 128 (782)
+....|.|+|||++.+ ++++||++.+++.++
T Consensus 101 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 101 DLAKKSLDISVWDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred hcCCCEEEEEEEECCCCCCCcEEEeEEEecccC
Confidence 2357999999999998 899999999999885
No 48
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.72 E-value=1e-17 Score=157.49 Aligned_cols=121 Identities=16% Similarity=0.235 Sum_probs=100.9
Q ss_pred eecceEEEEEEeccccccCCCCCCCCCCCCccccccccCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEEC-----
Q 045512 326 KFSSKILIRFCLEAGYHVLDESTHFSSDLQPSSMSLRKGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYG----- 399 (782)
Q Consensus 326 ~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~----- 399 (782)
...|+|.++++.. +..+.|.|.|++|+||++++. ..+. ||||++.+.
T Consensus 7 ~~~G~l~~sl~y~-------------------------~~~~~L~V~v~~a~~L~~~d~--~~~~~dpyv~v~l~~~~~~ 59 (148)
T 3fdw_A 7 FVTGRIAFSLKYE-------------------------QQTQSLVVHVKECHQLAYADE--AKKRSNPYVKTYLLPDKSR 59 (148)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCSBT--TTTBCCEEEEEEEETCCSG
T ss_pred ccceEEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCccc--CCCCCCeEEEEEEEcCCcc
Confidence 4569998888653 345899999999999997752 2355 999999996
Q ss_pred CEEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEce
Q 045512 400 NKWIRTRTILDTLDPRWNEQYTWEVYDP---CTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLL 476 (782)
Q Consensus 400 ~~~~~T~~~~~t~nP~wne~~~f~v~~~---~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 476 (782)
..+.+|+++++++||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|+++..+.....||+|.
T Consensus 60 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 133 (148)
T 3fdw_A 60 QGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFG------RNTFLGEAEIQMDSWKLDKKLDHCLPLH 133 (148)
T ss_dssp GGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGG------CEEEEEEEEEEHHHHHHHCCSEEEEECB
T ss_pred cCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCc------CCcEEEEEEEEcccccccCCccceEECc
Confidence 3478999999999999999999998753 347999999999876 8999999999999997776678999998
Q ss_pred eeC
Q 045512 477 VLT 479 (782)
Q Consensus 477 ~~~ 479 (782)
...
T Consensus 134 ~~~ 136 (148)
T 3fdw_A 134 GKI 136 (148)
T ss_dssp CC-
T ss_pred Ccc
Confidence 653
No 49
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.72 E-value=3.3e-17 Score=152.07 Aligned_cols=104 Identities=34% Similarity=0.514 Sum_probs=91.6
Q ss_pred cCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEeccC
Q 045512 24 RGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGIAKHLEKNQNPVWNQIFAFSKERL 98 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~i~~t~nP~wne~f~f~~~~~ 98 (782)
.|...+++.|+. ..+.|.|+|++|++|+..+..|.+||||++++++ .+++|+++++|.||+|||+|.|.+...
T Consensus 2 ~G~l~~sl~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~ 79 (138)
T 3n5a_A 2 RGELLLSLCYNP--SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTE 79 (138)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGG
T ss_pred CcEEEEEEEEcC--CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChh
Confidence 467788888875 5679999999999999999899999999999974 478999999999999999999997543
Q ss_pred --CCCeEEEEEEeCCCC-CCceeEEEEEEccccC
Q 045512 99 --QSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVP 129 (782)
Q Consensus 99 --~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~ 129 (782)
....|.|+|||++.+ +|++||++.+++.++.
T Consensus 80 ~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 80 KLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp GGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred hcCceEEEEEEEECCCCCCCcEEEEEEEccccCC
Confidence 246899999999998 8999999999998753
No 50
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.72 E-value=3.5e-17 Score=154.80 Aligned_cols=103 Identities=33% Similarity=0.434 Sum_probs=85.0
Q ss_pred ccCCceeEEEecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--Ce---eeeeccccCCCCCeeccEEEEEecc
Q 045512 23 YRGGDKTASSYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLG--NY---KGIAKHLEKNQNPVWNQIFAFSKER 97 (782)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~--~~---~~~T~~i~~t~nP~wne~f~f~~~~ 97 (782)
..|...+++.|+. ..+.|.|+|++|+||+.++..|.+||||+|++. +. +++|+++++|+||+|||+|.|.+..
T Consensus 15 ~~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 92 (153)
T 1w15_A 15 GRGELLVSLCYQS--TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPC 92 (153)
T ss_dssp -CCEEEEEEEEET--TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCS
T ss_pred cccEEEEEEEEcC--CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCH
Confidence 4677888888876 457999999999999999988999999999994 33 6799999999999999999999865
Q ss_pred C--CCCeEEEEEEeCCCC-CCceeEEEEEEccc
Q 045512 98 L--QSNLVEVTVKDKDIG-KDDFVGRVTFDLFE 127 (782)
Q Consensus 98 ~--~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~ 127 (782)
. ....|.|+|||++.+ ++++||++.+++.+
T Consensus 93 ~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 93 ESLEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp SSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred HHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 3 347899999999998 89999999999987
No 51
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.71 E-value=1.7e-17 Score=156.54 Aligned_cols=104 Identities=16% Similarity=0.190 Sum_probs=89.9
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECC------EEEeeccccCCCCCccccEEEEEEeCC---CceEEE
Q 045512 364 GSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGN------KWIRTRTILDTLDPRWNEQYTWEVYDP---CTVITI 433 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~------~~~~T~~~~~t~nP~wne~~~f~v~~~---~~~l~i 433 (782)
+..+.|.|.|++|+||+++|. .|. ||||++++.+ .++||+++++|+||+|||.|.|.+... ...|.|
T Consensus 40 ~~~~~L~V~Vi~a~~L~~~d~---~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~ 116 (155)
T 2z0u_A 40 EKNKQFAILIIQLSNLSALLQ---QQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRV 116 (155)
T ss_dssp TTTTEEEEEEEEEECGGGTCC---SCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEE
T ss_pred CCCCEEEEEEEEccCcCCccc---CCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEE
Confidence 345899999999999998763 466 9999999965 279999999999999999999998742 458999
Q ss_pred EEEeCCCCCCCCCCcCCCccEEEEEeccccc-CCcEEEEEEEce
Q 045512 434 GVFDNCHVNGSKDDAIDQRIGKVRIRLSTLE-TDRLYTHYYPLL 476 (782)
Q Consensus 434 ~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~ 476 (782)
+|||+|.++ +|++||++.|+|.++. .+....+||+|.
T Consensus 117 ~V~d~d~~~------~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 117 DVCTTDRSH------LEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEECTTS------CEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEEECCCCC------CCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999876 8999999999999995 366778999985
No 52
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.71 E-value=3.7e-17 Score=152.71 Aligned_cols=118 Identities=21% Similarity=0.280 Sum_probs=101.4
Q ss_pred eecceEEEEEEeccccccCCCCCCCCCCCCccccccccCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEE---CCE
Q 045512 326 KFSSKILIRFCLEAGYHVLDESTHFSSDLQPSSMSLRKGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKY---GNK 401 (782)
Q Consensus 326 ~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~---~~~ 401 (782)
...|+|.++++.. +..+.|.|+|++|+||++++. .+. ||||++++ +.+
T Consensus 18 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~---~g~~dpyv~v~l~~~~~~ 69 (143)
T 3f04_A 18 EKLGKLQYSLDYD-------------------------FQNNQLLVGIIQAAELPALDM---GGTSDPYVKVFLLPDKKK 69 (143)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCBGG---GBCCCEEEEEEEESCCSC
T ss_pred cCeEEEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCCCC---CCCcCcEEEEEEECCCCc
Confidence 4568888888642 345899999999999997753 356 99999999 456
Q ss_pred EEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEcee
Q 045512 402 WIRTRTILDTLDPRWNEQYTWEVYDP---CTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLV 477 (782)
Q Consensus 402 ~~~T~~~~~t~nP~wne~~~f~v~~~---~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 477 (782)
.++|+++++++||.|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++..+....+||+|..
T Consensus 70 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 70 KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS------KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS------CCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred cEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCC------CCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 89999999999999999999998732 468999999999876 89999999999999999988899999963
No 53
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=6.1e-17 Score=155.67 Aligned_cols=122 Identities=16% Similarity=0.139 Sum_probs=99.6
Q ss_pred cceEEEEEEEEeeCCCCCCCCCCCCCCcEEEEEECCEEEeeccccCCCCCccccEEEEEEeCCCceEEEEEEeCCCCCCC
Q 045512 365 SIGILELGILSAKNLMPMTSKDGKLTDAYCVAKYGNKWIRTRTILDTLDPRWNEQYTWEVYDPCTVITIGVFDNCHVNGS 444 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~nP~wne~~~f~v~~~~~~l~i~V~d~~~~~~~ 444 (782)
..+.|+|+|++|++|++.+. ..++||||+|+++++.+||+++++++||+|||.|.|.+. +...|.|+|||++.++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~--~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~-- 108 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKN--WFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLK-- 108 (173)
T ss_dssp CCEEEEEEEEEEEECCCC----CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSS--
T ss_pred CceEEEEEEEEeECCCCccc--CCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCC--
Confidence 45889999999999984332 123599999999999999999999999999999999985 4789999999999876
Q ss_pred CCCcCCCccEEEEEecccccCC---c--EEEEEEEceeeCCCCCccccEEEEEEEEE
Q 045512 445 KDDAIDQRIGKVRIRLSTLETD---R--LYTHYYPLLVLTPSGLKKNGELHLALRFT 496 (782)
Q Consensus 445 ~~~~~d~~lG~~~i~l~~l~~~---~--~~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 496 (782)
+|++||++.|+|.++..+ . ....|++|...+. +.+..|+|++.+.+.
T Consensus 109 ----~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~-~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 109 ----SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKE-PTETIGDLSICLDGL 160 (173)
T ss_dssp ----CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSC-TTSEEEEEEEEEESE
T ss_pred ----CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCC-CCcccEEEEEEEeee
Confidence 899999999999998532 1 2367999987532 334579999988764
No 54
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=5.3e-17 Score=148.78 Aligned_cols=103 Identities=25% Similarity=0.408 Sum_probs=84.1
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEE-----CCEEEeeccccCCCCCccccEEEEEEeC----CCceEEE
Q 045512 364 GSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKY-----GNKWIRTRTILDTLDPRWNEQYTWEVYD----PCTVITI 433 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~-----~~~~~~T~~~~~t~nP~wne~~~f~v~~----~~~~l~i 433 (782)
+..+.|.|+|++|+||++++. .|. ||||++++ +....+|+++++++||+|||.|.|.+.. ....|.|
T Consensus 15 ~~~~~L~v~v~~a~~L~~~d~---~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~ 91 (129)
T 2bwq_A 15 KVGHQLIVTILGAKDLPSRED---GRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEI 91 (129)
T ss_dssp TTTTEEEEEEEEEESCCCCTT---SCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEE
T ss_pred cCCCEEEEEEEEeeCCCCCCC---CCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEE
Confidence 344899999999999997653 466 99999999 4578999999999999999999999642 2468999
Q ss_pred EEEeCCCCCCCCCCcC--CCccEEEEEecccccCCcEEEEEEEce
Q 045512 434 GVFDNCHVNGSKDDAI--DQRIGKVRIRLSTLETDRLYTHYYPLL 476 (782)
Q Consensus 434 ~V~d~~~~~~~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L~ 476 (782)
+|||++.++ + |++||++.|+|.++.... ..+||+|.
T Consensus 92 ~V~d~d~~~------~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 92 TLWDQARVR------EEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EEEEC-------------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred EEEECCcCc------CcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 999999865 4 899999999999987654 78999983
No 55
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=4.6e-17 Score=151.89 Aligned_cols=122 Identities=16% Similarity=0.192 Sum_probs=99.4
Q ss_pred ceecceEEEEEEeccccccCCCCCCCCCCCCccccccccCcceEEEEEEEEeeCCCCCCCCCCCCCCcEEEEEECC----
Q 045512 325 EKFSSKILIRFCLEAGYHVLDESTHFSSDLQPSSMSLRKGSIGILELGILSAKNLMPMTSKDGKLTDAYCVAKYGN---- 400 (782)
Q Consensus 325 ~~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~---- 400 (782)
....|+|.+++... +..+.|.|.|++|+||++++.. |+||||++++.+
T Consensus 7 ~~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~~---g~dpyv~v~l~~~~~~ 58 (142)
T 2dmg_A 7 GSPLGQIQLTIRHS-------------------------SQRNKLIVVVHACRNLIAFSED---GSDPYVRMYLLPDKRR 58 (142)
T ss_dssp SCSSCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCSSTT---CCCEEEEEEEESCCCS
T ss_pred CCCcceEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCCCCC---CCCeeEEEEEEcCCCC
Confidence 34569998888653 3458999999999999987642 279999999932
Q ss_pred -EEEeeccccCCCCCccccEEEEEEeC---CCceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEce
Q 045512 401 -KWIRTRTILDTLDPRWNEQYTWEVYD---PCTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLL 476 (782)
Q Consensus 401 -~~~~T~~~~~t~nP~wne~~~f~v~~---~~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 476 (782)
.+++|+++++++||+|||.|.|.+.. ....|.|+|||++.++ ...|++||++.|+|.++..+....+||+|.
T Consensus 59 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~----~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~ 134 (142)
T 2dmg_A 59 SGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFL----SKDKGLLGKVLVALASEELAKGWTQWYDLT 134 (142)
T ss_dssp SSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSS----CCSCCCCEEEEEECCCSTTTTCBCCBCCCB
T ss_pred CCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCcc----ccCCcEEEEEEEecccccccccccceeecc
Confidence 57899999999999999999999863 2358999999999764 012579999999999998777778999998
Q ss_pred ee
Q 045512 477 VL 478 (782)
Q Consensus 477 ~~ 478 (782)
..
T Consensus 135 ~~ 136 (142)
T 2dmg_A 135 ED 136 (142)
T ss_dssp CS
T ss_pred CC
Confidence 63
No 56
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=7.2e-17 Score=150.37 Aligned_cols=121 Identities=22% Similarity=0.384 Sum_probs=98.9
Q ss_pred eecceEEEEEEeccccccCCCCCCCCCCCCccccccccCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEE-----C
Q 045512 326 KFSSKILIRFCLEAGYHVLDESTHFSSDLQPSSMSLRKGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKY-----G 399 (782)
Q Consensus 326 ~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~-----~ 399 (782)
...|+|.+++.+. +..+.|.|.|++|+||++++. .+. ||||++++ +
T Consensus 5 ~~~G~i~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~~ 56 (141)
T 1v27_A 5 SSGGQLSIKLWFD-------------------------KVGHQLIVTILGAKDLPSRED---GRPRNPYVKIYFLPDRSD 56 (141)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCSS---SCCCCEEEECCCSSCCSS
T ss_pred CcccEEEEEEEEe-------------------------CCCCEEEEEEEEccCCCCcCC---CCCCCCEEEEEEecCCCC
Confidence 3469999888653 334899999999999997753 366 99999999 4
Q ss_pred CEEEeeccccCCCCCccccEEEEEEeC----CCceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEc
Q 045512 400 NKWIRTRTILDTLDPRWNEQYTWEVYD----PCTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPL 475 (782)
Q Consensus 400 ~~~~~T~~~~~t~nP~wne~~~f~v~~----~~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L 475 (782)
.+.+||+++++++||+|||.|.|.+.. ....|.|+|||++.++ ..+|++||++.|+|.++.... ..+||+|
T Consensus 57 ~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~----~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 131 (141)
T 1v27_A 57 KNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVR----EEESEFLGEILIELETALLDD-EPHWYKL 131 (141)
T ss_dssp SSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSS----SCCBCCCEEEEEEGGGCCCSS-EEEEEEC
T ss_pred CcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCc----CCCCceEEEEEEEccccCCCC-CCceEEC
Confidence 568999999999999999999999532 2468999999999875 112899999999999987655 7899999
Q ss_pred eeeC
Q 045512 476 LVLT 479 (782)
Q Consensus 476 ~~~~ 479 (782)
....
T Consensus 132 ~~~~ 135 (141)
T 1v27_A 132 QTHD 135 (141)
T ss_dssp BCCS
T ss_pred cccc
Confidence 8643
No 57
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.70 E-value=9.3e-17 Score=148.02 Aligned_cols=103 Identities=15% Similarity=0.240 Sum_probs=90.0
Q ss_pred cceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEE-----CCEEEeeccccCCCCCccccEEEEE-EeC---CCceEEEE
Q 045512 365 SIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKY-----GNKWIRTRTILDTLDPRWNEQYTWE-VYD---PCTVITIG 434 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~-----~~~~~~T~~~~~t~nP~wne~~~f~-v~~---~~~~l~i~ 434 (782)
..+.|.|+|++|+||+. + ..|. ||||++++ +..+.||+++++++||+|||.|.|. +.. ....|.|+
T Consensus 18 ~~~~L~V~V~~a~~L~~-~---~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~ 93 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-E---DGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLS 93 (134)
T ss_dssp ETTEEEEEEEEEECCCC-T---TSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-C---CCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEE
Confidence 34899999999999985 3 2355 99999999 4567899999999999999999999 763 35689999
Q ss_pred EEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEcee
Q 045512 435 VFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLV 477 (782)
Q Consensus 435 V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 477 (782)
|||++.++ +|++||++.|+|+++..++....||+|..
T Consensus 94 V~d~d~~~------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 94 VLSAESLR------ENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EEECCSSS------CCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EEECCCCC------CCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 99999876 78999999999999998888899999975
No 58
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.70 E-value=7.3e-17 Score=152.49 Aligned_cols=105 Identities=24% Similarity=0.316 Sum_probs=89.8
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEEC-----CEEEeeccccCCCCCccccEEEEEEe--CCCceEEEEE
Q 045512 364 GSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYG-----NKWIRTRTILDTLDPRWNEQYTWEVY--DPCTVITIGV 435 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~-----~~~~~T~~~~~t~nP~wne~~~f~v~--~~~~~l~i~V 435 (782)
+..+.|.|+|++|+||++++ .|. ||||++.+. ....+|+++++++||.|||.|.|.+. +....|.|+|
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d----~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 99 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQ----PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTV 99 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCS----SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCC----CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEE
Confidence 44589999999999999875 255 999999993 35689999999999999999999994 4556799999
Q ss_pred EeCCCCCCCCCCcC-CCccEEEEEecccccC-CcEEEEEEEceee
Q 045512 436 FDNCHVNGSKDDAI-DQRIGKVRIRLSTLET-DRLYTHYYPLLVL 478 (782)
Q Consensus 436 ~d~~~~~~~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~ 478 (782)
||++.++ + |++||++.|+|+++.. +.....||+|...
T Consensus 100 ~d~d~~~------~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 100 WNRASQS------RQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp EECCSSG------GGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred EeCCCCC------CCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 9999764 5 8999999999999985 7778999999864
No 59
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.70 E-value=1e-16 Score=148.59 Aligned_cols=102 Identities=26% Similarity=0.429 Sum_probs=89.6
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEE-----CCEEEeeccccCCCCCccccEEEEEEeCC--CceEEEEEEeC
Q 045512 367 GILELGILSAKNLMPMTSKDGKLT-DAYCVAKY-----GNKWIRTRTILDTLDPRWNEQYTWEVYDP--CTVITIGVFDN 438 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~-----~~~~~~T~~~~~t~nP~wne~~~f~v~~~--~~~l~i~V~d~ 438 (782)
|.|.|+|++|+||++++. .|. ||||++++ +....+|++++++.||.|||.|.|.+... ...|.|+|||+
T Consensus 16 ~~L~v~v~~a~~L~~~d~---~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~ 92 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMDP---NGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDW 92 (137)
T ss_dssp TEEEEEEEEEESCCCCST---TSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCC---CCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEEC
Confidence 789999999999998754 366 99999999 56789999999999999999999998753 35899999999
Q ss_pred CCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceee
Q 045512 439 CHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVL 478 (782)
Q Consensus 439 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 478 (782)
+.++ +|++||++.|+|+++..+. ..+||+|...
T Consensus 93 d~~~------~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 93 DRTT------RNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp CSSS------CCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCC------CCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9876 8999999999999997665 7899999864
No 60
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.69 E-value=1e-16 Score=154.44 Aligned_cols=104 Identities=22% Similarity=0.320 Sum_probs=90.9
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECC-----EEEeeccccCCCCCccccEEEEEEeCCCceEEEEEE-eCC
Q 045512 367 GILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGN-----KWIRTRTILDTLDPRWNEQYTWEVYDPCTVITIGVF-DNC 439 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~~~f~v~~~~~~l~i~V~-d~~ 439 (782)
|.|.|+|++|+||+++|. ..|. ||||++++.+ .++||+++++++||+|||+|.|.+......|.|+|| |++
T Consensus 30 ~~L~V~v~~a~~L~~~d~--~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPG--SKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp TEEEEEEEEEESCCCCC-----CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CEEEEEEEEeeCCCCCCc--CCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 789999999999998752 1356 9999999853 378999999999999999999998766679999999 999
Q ss_pred CCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceee
Q 045512 440 HVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVL 478 (782)
Q Consensus 440 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 478 (782)
.++ +|++||++.|+|+++..+....+||+|...
T Consensus 108 ~~~------~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 108 RMD------HKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TTC------SSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCC------CCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 876 889999999999999888888999999864
No 61
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.69 E-value=3e-16 Score=149.39 Aligned_cols=118 Identities=25% Similarity=0.294 Sum_probs=98.1
Q ss_pred eecceEEEEEEeccccccCCCCCCCCCCCCccccccccCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECC----
Q 045512 326 KFSSKILIRFCLEAGYHVLDESTHFSSDLQPSSMSLRKGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGN---- 400 (782)
Q Consensus 326 ~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~---- 400 (782)
...|+|.+.+... +..|.|.|+|++|+||++++. .|. ||||++++++
T Consensus 9 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~d~---~g~~dpyv~v~l~~~~~~ 60 (159)
T 1tjx_A 9 EKLGDICFSLRYV-------------------------PTAGKLTVVILEAKNLKKMDV---GGLSDPYVKIHLMQNGKR 60 (159)
T ss_dssp GCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCST---TSCCCEEEEEEEEETTEE
T ss_pred CcCCeEEEEEEEc-------------------------CCCCEEEEEEEEeeCCCCccC---CCCCCeEEEEEEEeCCce
Confidence 4569999888642 445899999999999998753 366 9999999952
Q ss_pred -EEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccc------------c
Q 045512 401 -KWIRTRTILDTLDPRWNEQYTWEVYDP---CTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTL------------E 464 (782)
Q Consensus 401 -~~~~T~~~~~t~nP~wne~~~f~v~~~---~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l------------~ 464 (782)
...+|+++++++||.|||.|.|.+... ...|.|+|||++.++ +|++||++.|++..+ .
T Consensus 61 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~w~~l~~~ 134 (159)
T 1tjx_A 61 LKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG------KNDAIGKVFVGYNSTGAELRHWSDMLAN 134 (159)
T ss_dssp EEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS------CCEEEEEEEEETTCCHHHHHHHHHHHHS
T ss_pred eceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCC------CCceEEEEEECCCCCCcHHHHHHHHHHC
Confidence 468999999999999999999998743 357999999999876 899999999999953 3
Q ss_pred CCcEEEEEEEcee
Q 045512 465 TDRLYTHYYPLLV 477 (782)
Q Consensus 465 ~~~~~~~~~~L~~ 477 (782)
.+.....||+|..
T Consensus 135 ~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 135 PRRPIAQWHTLQV 147 (159)
T ss_dssp TTCCEEEEEECBC
T ss_pred CCCeeeeEEECcC
Confidence 4567789999975
No 62
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.69 E-value=2.4e-16 Score=146.18 Aligned_cols=120 Identities=19% Similarity=0.226 Sum_probs=97.4
Q ss_pred eecceEEEEEEeccccccCCCCCCCCCCCCccccccccCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEEC---CE
Q 045512 326 KFSSKILIRFCLEAGYHVLDESTHFSSDLQPSSMSLRKGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYG---NK 401 (782)
Q Consensus 326 ~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~---~~ 401 (782)
...|+|.+++... +..+.|.|+|++|+||++++.. .+. ||||++++. .+
T Consensus 6 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~~--~~~~dpyv~v~~~~~~~~ 58 (138)
T 1ugk_A 6 SGLGTLFFSLEYN-------------------------FERKAFVVNIKEARGLPAMDEQ--SMTSDPYIKMTILPEKKH 58 (138)
T ss_dssp CCCCEEEEEEEEE-------------------------GGGTEEEEEEEEEESCCCCBTT--TTBCEEEEEEEEETTTCS
T ss_pred CccEEEEEEEEEE-------------------------CCCCEEEEEEEEeeCCCCCCCC--CCCCCCEEEEEEecCCCc
Confidence 3468998888642 4458999999999999987531 255 999999995 37
Q ss_pred EEeeccccCCCCCccccEEEEE-EeC---CCceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccccCCc-EEEEEEEce
Q 045512 402 WIRTRTILDTLDPRWNEQYTWE-VYD---PCTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDR-LYTHYYPLL 476 (782)
Q Consensus 402 ~~~T~~~~~t~nP~wne~~~f~-v~~---~~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~-~~~~~~~L~ 476 (782)
.+||+++++++||+|||.|.|. +.. ....|.|+|||++.++ +|++||++.|+|.++..+. ....|++|.
T Consensus 59 ~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~------~~~~lG~~~i~l~~l~~~~~~~~~~~~l~ 132 (138)
T 1ugk_A 59 KVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFS------RDDIIGEVLIPLSGIELSEGKMLMNREII 132 (138)
T ss_dssp EEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSC------CCCCCEEEEEECTTCCCTTCCEEEEEECB
T ss_pred eEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCCCC------CCcEEEEEEEehhHccCCCCcchhhhhhh
Confidence 8999999999999999999996 653 2358999999999876 8999999999999997654 345678887
Q ss_pred ee
Q 045512 477 VL 478 (782)
Q Consensus 477 ~~ 478 (782)
..
T Consensus 133 ~~ 134 (138)
T 1ugk_A 133 SG 134 (138)
T ss_dssp SS
T ss_pred cC
Confidence 54
No 63
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.69 E-value=3.1e-16 Score=145.35 Aligned_cols=116 Identities=13% Similarity=0.082 Sum_probs=96.0
Q ss_pred eecceEEEEEEeccccccCCCCCCCCCCCCccccccccCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEEC---C-
Q 045512 326 KFSSKILIRFCLEAGYHVLDESTHFSSDLQPSSMSLRKGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYG---N- 400 (782)
Q Consensus 326 ~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~---~- 400 (782)
...|+|.+.+... ...+.|.|+|++|++ + +..|. ||||++.+. +
T Consensus 10 ~~~G~l~~sl~y~-------------------------~~~~~L~V~v~~a~~---~---d~~g~sDPyv~v~l~~~~~~ 58 (138)
T 1wfm_A 10 NQAPKLHYCLDYD-------------------------CQKAELFVTRLEAVT---S---NHDGGCDCYVQGSVANRTGS 58 (138)
T ss_dssp SSCCEEEEEEEEE-------------------------TTTTEEEEEEEEEEC---C---CCSSCCCEEEEEEEEETTEE
T ss_pred CcceEEEEEEEEe-------------------------CCCCEEEEEEEEEEc---C---CCCCCcceEEEEEEEcCCCc
Confidence 3468988888643 334899999999994 3 33466 999999993 2
Q ss_pred EEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEcee
Q 045512 401 KWIRTRTILDTLDPRWNEQYTWEVYDP---CTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLV 477 (782)
Q Consensus 401 ~~~~T~~~~~t~nP~wne~~~f~v~~~---~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 477 (782)
.+++|+++++++||+|||.|.|.+... ...|.|+|||+|.++ +|++||++.|+|.++..+.....||+|..
T Consensus 59 ~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~------~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 59 VEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFS------RHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp EEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSSC------TTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCCC------CCcEEEEEEEEcccccCcccccceeeCcC
Confidence 368999999999999999999998743 458999999999876 89999999999999976666789999986
Q ss_pred e
Q 045512 478 L 478 (782)
Q Consensus 478 ~ 478 (782)
.
T Consensus 133 ~ 133 (138)
T 1wfm_A 133 S 133 (138)
T ss_dssp C
T ss_pred C
Confidence 3
No 64
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=2e-16 Score=148.78 Aligned_cols=102 Identities=24% Similarity=0.405 Sum_probs=89.4
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEEC-----CEEEeeccccCCCCCccccEEEEEEeCC--CceEEEEEEeC
Q 045512 367 GILELGILSAKNLMPMTSKDGKLT-DAYCVAKYG-----NKWIRTRTILDTLDPRWNEQYTWEVYDP--CTVITIGVFDN 438 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~-----~~~~~T~~~~~t~nP~wne~~~f~v~~~--~~~l~i~V~d~ 438 (782)
+.|.|+|++|+||++++. .+. ||||++++. ...+||+++++++||+|||+|.|.+... ...|.|+|||+
T Consensus 31 ~~L~v~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 107 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMDP---NGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDW 107 (149)
T ss_dssp SEEEEEEEEEESCCCCST---TSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCC---CCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEEC
Confidence 689999999999998753 366 999999996 4678999999999999999999999753 45899999999
Q ss_pred CCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceee
Q 045512 439 CHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVL 478 (782)
Q Consensus 439 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 478 (782)
+.++ +|++||++.|+|.++..+. ..+||+|...
T Consensus 108 d~~~------~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 140 (149)
T 1a25_A 108 DLTS------RNDFMGSLSFGISELQKAG-VDGWFKLLSQ 140 (149)
T ss_dssp CSSS------CCEEEEEEEEEHHHHTTCC-EEEEEECBCH
T ss_pred CCCC------CCCEEEEEEEEHHHhCcCc-cCCeEEccCC
Confidence 9876 7999999999999998764 7899999753
No 65
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=1.4e-16 Score=149.48 Aligned_cols=122 Identities=16% Similarity=0.137 Sum_probs=99.8
Q ss_pred eecceEEEEEEeccccccCCCCCCCCCCCCccccccccCcceEEEEEEEEeeCCCCC-CCC---CCCCC-CcEEEEEEC-
Q 045512 326 KFSSKILIRFCLEAGYHVLDESTHFSSDLQPSSMSLRKGSIGILELGILSAKNLMPM-TSK---DGKLT-DAYCVAKYG- 399 (782)
Q Consensus 326 ~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~-~~~---~~~~~-dpyv~v~~~- 399 (782)
...|+|.+.++.. +..+.|.|+|++|+||++. +.. +..+. ||||++++.
T Consensus 10 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~ 64 (147)
T 2enp_A 10 YQLGMLHFSTQYD-------------------------LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLP 64 (147)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEET
T ss_pred CcceEEEEEEEEc-------------------------CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEe
Confidence 4569999888653 3458999999999999973 331 11345 999999996
Q ss_pred --CEEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEE
Q 045512 400 --NKWIRTRTILDTLDPRWNEQYTWEVYDP---CTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYP 474 (782)
Q Consensus 400 --~~~~~T~~~~~t~nP~wne~~~f~v~~~---~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~ 474 (782)
.+.+||+++++++||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++..+.....|++
T Consensus 65 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~w~~ 138 (147)
T 2enp_A 65 DQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFS------RHCVIGKVSVPLCEVDLVKGGHWWKA 138 (147)
T ss_dssp CCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTC------CSCCCEEEEEETTTSCTTTCCCEEEC
T ss_pred CCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCc------CCcEEEEEEEechhcCCCCCccEEEE
Confidence 3578999999999999999999998642 358999999999876 78999999999999977666678999
Q ss_pred ceee
Q 045512 475 LLVL 478 (782)
Q Consensus 475 L~~~ 478 (782)
|...
T Consensus 139 L~~~ 142 (147)
T 2enp_A 139 LIPS 142 (147)
T ss_dssp CBCC
T ss_pred eecC
Confidence 9753
No 66
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.67 E-value=4.8e-17 Score=151.79 Aligned_cols=102 Identities=25% Similarity=0.364 Sum_probs=88.5
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECCE--------------EEeeccccCCCCCccccEEEEE-EeC---C
Q 045512 367 GILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGNK--------------WIRTRTILDTLDPRWNEQYTWE-VYD---P 427 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~--------------~~~T~~~~~t~nP~wne~~~f~-v~~---~ 427 (782)
|.|.|+|++|+||++++. .|. ||||++++++. .+||+++++++||+|||.|.|. +.. .
T Consensus 18 ~~L~V~v~~a~~L~~~d~---~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~ 94 (142)
T 1rh8_A 18 GNLIIHILQARNLVPRDN---NGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLM 94 (142)
T ss_dssp TEEEEEEEEEESCCCCSS---SSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHT
T ss_pred CEEEEEEEEecCCCCCCC---CCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHcc
Confidence 789999999999998753 466 99999999763 4799999999999999999997 542 3
Q ss_pred CceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEcee
Q 045512 428 CTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLV 477 (782)
Q Consensus 428 ~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 477 (782)
...|.|+|||++.++ +|++||++.|+|+++..+.....||+|..
T Consensus 95 ~~~l~i~V~d~d~~~------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 95 KKTLEVTVWDYDRFS------SNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp TCEEEEEEEEECSSS------CEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred CCEEEEEEEECCCCC------CCceEEEEEEeccccccCCCCCeEEECCc
Confidence 568999999999876 79999999999999987666789999975
No 67
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.67 E-value=2.3e-16 Score=147.08 Aligned_cols=118 Identities=23% Similarity=0.313 Sum_probs=98.9
Q ss_pred eecceEEEEEEeccccccCCCCCCCCCCCCccccccccCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECC----
Q 045512 326 KFSSKILIRFCLEAGYHVLDESTHFSSDLQPSSMSLRKGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGN---- 400 (782)
Q Consensus 326 ~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~---- 400 (782)
...|+|.+.+... +..+.|.|+|++|+||++++. .|. ||||++++++
T Consensus 13 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~~ 64 (142)
T 2chd_A 13 TTLGALEFSLLYD-------------------------QDNSNLQCTIIRAKGLKPMDS---NGLADPYVKLHLLPGASK 64 (142)
T ss_dssp -CCCEEEEEEEEE-------------------------GGGTEEEEEEEEEESCCCCCT---TSCCCEEEEEEEESCCSG
T ss_pred CccceEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCCCC---CCCCCCEEEEEEEcCCCC
Confidence 4468888888643 345899999999999998753 466 9999999965
Q ss_pred -EEEeeccccCCCCCccccEEEEE-EeCC---CceEEEEEEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEc
Q 045512 401 -KWIRTRTILDTLDPRWNEQYTWE-VYDP---CTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPL 475 (782)
Q Consensus 401 -~~~~T~~~~~t~nP~wne~~~f~-v~~~---~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L 475 (782)
..+||+++++++||+|||.|.|. +... ...|.|+|||++.++ +|++||++.|+|.++..++....|++|
T Consensus 65 ~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~------~d~~iG~~~i~l~~l~~~~~~~~~~~L 138 (142)
T 2chd_A 65 SNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFG------HNEFIGETRFSLKKLKANQRKNFNICL 138 (142)
T ss_dssp GGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECTTS------CEEEEEEEEEEGGGCCTTCCEEEEEEC
T ss_pred cceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCCCC------CCcEEEEEEEEHHHcCCCCccEEEEec
Confidence 68999999999999999999998 5421 368999999999876 789999999999999988877888888
Q ss_pred ee
Q 045512 476 LV 477 (782)
Q Consensus 476 ~~ 477 (782)
..
T Consensus 139 ~~ 140 (142)
T 2chd_A 139 ER 140 (142)
T ss_dssp BC
T ss_pred cc
Confidence 63
No 68
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.67 E-value=4e-16 Score=144.70 Aligned_cols=92 Identities=25% Similarity=0.299 Sum_probs=79.5
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECC-----EEEeeccccCCCCCccccEEEEEEeCCC---ceEEEE
Q 045512 364 GSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGN-----KWIRTRTILDTLDPRWNEQYTWEVYDPC---TVITIG 434 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~~~f~v~~~~---~~l~i~ 434 (782)
+..|.|.|.|++|+||++++. .|. ||||++++++ .+.+|++++++.||.|||.|.|.+.... ..|.|+
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~ 89 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDI---GGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIIT 89 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBT---TTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCC---CCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEE
Confidence 445899999999999998754 356 9999999964 4789999999999999999999987543 589999
Q ss_pred EEeCCCCCCCCCCcCCCccEEEEEeccccc
Q 045512 435 VFDNCHVNGSKDDAIDQRIGKVRIRLSTLE 464 (782)
Q Consensus 435 V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~ 464 (782)
|||++.++ +|++||++.|+|.++.
T Consensus 90 V~d~~~~~------~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 90 VMDKDKLS------RNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EEECCSSS------CCEEEEEEEESSSSCH
T ss_pred EEECCCCC------CCcEEEEEEEccccCC
Confidence 99999876 8999999999999763
No 69
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.66 E-value=7.6e-16 Score=147.63 Aligned_cols=118 Identities=20% Similarity=0.281 Sum_probs=96.4
Q ss_pred eecceEEEEEEeccccccCCCCCCCCCCCCccccccccCcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECC----
Q 045512 326 KFSSKILIRFCLEAGYHVLDESTHFSSDLQPSSMSLRKGSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGN---- 400 (782)
Q Consensus 326 ~~~G~l~l~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~---- 400 (782)
...|+|.+++.+. +..+.|.|.|++|+||++++. .|. ||||++++++
T Consensus 21 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~d~---~g~~DPyv~v~l~~~~~~ 72 (166)
T 2cm5_A 21 EERGKILVSLMYS-------------------------TQQGGLIVGIIRCVHLAAMDA---NGYSDPFVKLWLKPDMGK 72 (166)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCST---TSCCCEEEEEEEETC---
T ss_pred CccceEEEEEEEE-------------------------CCCCEEEEEEEEeECCCCccC---CCCCCcEEEEEEECCCCc
Confidence 4568888888642 345899999999999998754 366 9999999975
Q ss_pred -EEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCcCCCccEEEEEeccccc------------
Q 045512 401 -KWIRTRTILDTLDPRWNEQYTWEVYDP---CTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLSTLE------------ 464 (782)
Q Consensus 401 -~~~~T~~~~~t~nP~wne~~~f~v~~~---~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~------------ 464 (782)
..++|+++++++||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++.
T Consensus 73 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~W~~l~~~ 146 (166)
T 2cm5_A 73 KAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGK------SNDYIGGCQLGISAKGERLKHWYECLKN 146 (166)
T ss_dssp CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS------CCEEEEEEEEETTCCHHHHHHHHHHHHC
T ss_pred cceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCCC------CCcEEEeEEEecccCCchhHHHHHHHhC
Confidence 679999999999999999999999742 458999999999876 8999999999999863
Q ss_pred CCcEEEEEEEcee
Q 045512 465 TDRLYTHYYPLLV 477 (782)
Q Consensus 465 ~~~~~~~~~~L~~ 477 (782)
.++....|++|..
T Consensus 147 ~~~~~~~Wh~L~~ 159 (166)
T 2cm5_A 147 KDKKIERWHQLQN 159 (166)
T ss_dssp TTCCEEEEEECBC
T ss_pred CCCcceEeeECCC
Confidence 3445556666654
No 70
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.64 E-value=5.5e-16 Score=141.87 Aligned_cols=88 Identities=27% Similarity=0.325 Sum_probs=74.3
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeecccc-CCCCCeeccEEEEEeccCCCCeEEEEEEeCCCC-CC
Q 045512 38 QMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGIAKHLE-KNQNPVWNQIFAFSKERLQSNLVEVTVKDKDIG-KD 115 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~i~-~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d~~-~d 115 (782)
.++.|.|+|++|++|+. .|.+||||+++ ++..+|+++. +|.||+|||+|.|.+... ...|.|+|||+| + +|
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~d 75 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWD 75 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-SSCE
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-CCCC
Confidence 46799999999999853 68899999999 3444565555 799999999999999864 467999999999 7 99
Q ss_pred ceeEEEEEEccccCCCC
Q 045512 116 DFVGRVTFDLFEVPHRV 132 (782)
Q Consensus 116 ~~lG~~~i~l~~l~~~~ 132 (782)
++||++.|+|.++....
T Consensus 76 d~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 76 TMVGTVWIPLRTIRQSN 92 (131)
T ss_dssp EEEEEEEEEGGGSCBCS
T ss_pred CeEEEEEEEHHHhhhcC
Confidence 99999999999987543
No 71
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.63 E-value=1.6e-15 Score=135.96 Aligned_cols=115 Identities=15% Similarity=0.185 Sum_probs=100.9
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeecccc-CCCCCeeccEEEEEeccC--CCCeEEEEEEeCCCC-CCc
Q 045512 41 YLFVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGIAKHLE-KNQNPVWNQIFAFSKERL--QSNLVEVTVKDKDIG-KDD 116 (782)
Q Consensus 41 ~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~i~-~t~nP~wne~f~f~~~~~--~~~~L~v~V~d~d~~-~d~ 116 (782)
.|+|+|.+|.+|+ |++|||+++.+.+.+++|++++ ++.||+|||.|.|++..+ .+..|.|.|||++.+ +++
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 5899999999999 5789999999999999999998 699999999999998642 468999999999999 999
Q ss_pred eeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEEcc
Q 045512 117 FVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWIGT 166 (782)
Q Consensus 117 ~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 166 (782)
+||++.++|+++..... ...+-+|.+.++.... ++|.+++.|.+
T Consensus 97 lIG~~~i~Lq~lv~~~~-----l~l~~~LvD~n~~~~~-a~I~l~l~Y~p 140 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENR-----VEVSDTLIDDNNAIIK-TSLSMEVRYQA 140 (144)
T ss_dssp EEEEEEEESHHHHHHSE-----EEEEEEEECTTSCEEE-EEEEEEEEEEE
T ss_pred EEEEEEEEhHHhccCCe-----EEEeecccCCCCCccc-cEEEEEEEecC
Confidence 99999999999987542 3356788888887766 99999998875
No 72
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.61 E-value=2.5e-15 Score=143.15 Aligned_cols=121 Identities=21% Similarity=0.203 Sum_probs=90.1
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeecccc-CCCCCeeccEEEEEeccCCCCeEEEEEEeCCCC-CC
Q 045512 38 QMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGIAKHLE-KNQNPVWNQIFAFSKERLQSNLVEVTVKDKDIG-KD 115 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~i~-~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d~~-~d 115 (782)
.++.|.|+|++|++|+ ..|.+||||+++ ++..+|+++. +|.||+|||+|.|.+... ...|.|+|||+| + +|
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~d 84 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWD 84 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-SSCC
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-CCCC
Confidence 3679999999999885 268899999999 4445677665 699999999999999874 467999999999 6 99
Q ss_pred ceeEEEEEEccccCCCCCCC-CCCCCeEEEeecCCCCc-----ccceEEEEEEEEc
Q 045512 116 DFVGRVTFDLFEVPHRVPPD-SPLAPQWYRLEDRKGDK-----ITQGEIMLAVWIG 165 (782)
Q Consensus 116 ~~lG~~~i~l~~l~~~~~~~-~~~~~~w~~L~~~~~~~-----~~~G~l~l~~~~~ 165 (782)
++||++.|+|.++....... ..+.+.|+++..++|.. ...|.+++.+++.
T Consensus 85 d~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 85 TMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp EEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 99999999999987543111 12344566655444431 1125577777764
No 73
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.61 E-value=3.9e-15 Score=140.67 Aligned_cols=89 Identities=26% Similarity=0.288 Sum_probs=73.8
Q ss_pred EEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC--Ce---eeecccccCCCCCCcccceeEEEecCCC--CCeEEEEEEEcc
Q 045512 202 YYLRVFVFEAQDLVPSEEGRAPDAYVKIQLG--NL---VRVTRPSHVRSVNPVWNEEHMFVASEPF--EDLIIVTVEDRI 274 (782)
Q Consensus 202 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg--~~---~~kT~~~~~~t~nP~wne~f~f~v~~~~--~~~L~i~V~d~d 274 (782)
+.|.|+|++|++|+..+..+.+||||++.+. +. .++|+++++ +.||.|||+|.|.+.... ...|.|+|||++
T Consensus 30 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d 108 (153)
T 1w15_A 30 NTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKC-TPNAVFNELFVFDIPCESLEEISVEFLVLDSE 108 (153)
T ss_dssp TEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCS-CSSEEEEEEEEEECCSSSSTTEEEEEEEEECC
T ss_pred CEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccC-CCCCeecceEEEECCHHHhCceEEEEEEEeCC
Confidence 4699999999999999988999999999994 33 679999987 999999999999986543 357999999999
Q ss_pred CCCCCceeEEEEEeCCC
Q 045512 275 GPGKDEILGREFIPVRN 291 (782)
Q Consensus 275 ~~~~d~~lG~~~i~l~~ 291 (782)
..+++++||++.++++.
T Consensus 109 ~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 109 RGSRNEVIGRLVLGATA 125 (153)
T ss_dssp TTSCCEEEEEEEESTTC
T ss_pred CCCCCcEEEEEEECCCC
Confidence 99999999999999988
No 74
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.59 E-value=3.6e-15 Score=136.39 Aligned_cols=85 Identities=22% Similarity=0.380 Sum_probs=72.5
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECCEEEeecccc-CCCCCccccEEEEEEeCCCceEEEEEEeCCCCCC
Q 045512 366 IGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGNKWIRTRTIL-DTLDPRWNEQYTWEVYDPCTVITIGVFDNCHVNG 443 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~~T~~~~-~t~nP~wne~~~f~v~~~~~~l~i~V~d~~~~~~ 443 (782)
.+.|.|+|++|++|.. .|. ||||+++ ++..+|++++ +++||.|||.|.|.+.++...|.|+|||+| ++
T Consensus 4 ~~~L~V~V~~A~~l~~------~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~- 73 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI- 73 (131)
T ss_dssp CEEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SS-
T ss_pred ceEEEEEEEEeECCCC------CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CC-
Confidence 4899999999998852 355 9999999 3345666665 699999999999999987778999999999 76
Q ss_pred CCCCcCCCccEEEEEecccccC
Q 045512 444 SKDDAIDQRIGKVRIRLSTLET 465 (782)
Q Consensus 444 ~~~~~~d~~lG~~~i~l~~l~~ 465 (782)
+|++||++.|+|+++..
T Consensus 74 -----~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 74 -----WDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp -----CEEEEEEEEEEGGGSCB
T ss_pred -----CCCeEEEEEEEHHHhhh
Confidence 79999999999999854
No 75
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.58 E-value=8.8e-15 Score=131.21 Aligned_cols=117 Identities=15% Similarity=0.215 Sum_probs=100.7
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECCEEEeecccc-CCCCCccccEEEEEEeC---CCceEEEEEEeCCCC
Q 045512 367 GILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGNKWIRTRTIL-DTLDPRWNEQYTWEVYD---PCTVITIGVFDNCHV 441 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~~T~~~~-~t~nP~wne~~~f~v~~---~~~~l~i~V~d~~~~ 441 (782)
-.|+|.|.+|.||+ |+ |||+++.+.+.+++|++++ .+.||+|||.|+|++.. ..+.|.|.|+|++.+
T Consensus 21 msL~V~l~~a~~Lp--------g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 21 MALIVHLKTVSELR--------GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp EEEEEEEEEEESCC--------SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred EEEEEEEEEecCCC--------CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 47999999999998 46 9999999999999999998 59999999999999984 467999999999998
Q ss_pred CCCCCCcCCCccEEEEEecccccCCcEEEEEEEceeeCCCCCccccEEEEEEEEEECc
Q 045512 442 NGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVLTPSGLKKNGELHLALRFTCTA 499 (782)
Q Consensus 442 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~~ 499 (782)
+ ++.+||++.|+|.++..+....-+-+|.+.+.+ .-.+.|.++++|++..
T Consensus 93 ~------~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~--~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 93 F------SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNA--IIKTSLSMEVRYQAAD 142 (144)
T ss_dssp S------CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSC--EEEEEEEEEEEEEETT
T ss_pred c------CCCEEEEEEEEhHHhccCCeEEEeecccCCCCC--ccccEEEEEEEecCCC
Confidence 7 899999999999999877777777888775432 2248899988887643
No 76
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.57 E-value=6e-15 Score=168.08 Aligned_cols=122 Identities=22% Similarity=0.386 Sum_probs=104.7
Q ss_pred ccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEeccCCCCeEEEEEEeCCCC-CC
Q 045512 37 EQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGIAKHLEKNQNPVWNQIFAFSKERLQSNLVEVTVKDKDIG-KD 115 (782)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~i~~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d~~-~d 115 (782)
...+.|.|+|++|++|+++|..|.+||||++++++++++|+++++|+||+|||+|.|.+.......|.|+|||+|.+ +|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 35679999999999999999999999999999999999999999999999999999999877778899999999998 89
Q ss_pred ceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEE
Q 045512 116 DFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWI 164 (782)
Q Consensus 116 ~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 164 (782)
++||++.+++.++..+...+. ....|++|.... .|+|.+++.+
T Consensus 464 d~lG~~~~~l~~l~~~~~~~~-~~~~~~~l~~~~-----~G~i~l~~~l 506 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESKG-PMTRRLLLHEVP-----TGEVWVRFDL 506 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHHC-SCCEEEECBSSS-----SCEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCCC-ceeeeecCCCCC-----CceEEEEEEE
Confidence 999999999999876432111 256899997642 2899888755
No 77
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.56 E-value=1.4e-14 Score=162.39 Aligned_cols=109 Identities=22% Similarity=0.300 Sum_probs=94.4
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEecc-CCCCeEEEEEEeCCCC-CC
Q 045512 38 QMHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGIAKHLEKNQNPVWNQIFAFSKER-LQSNLVEVTVKDKDIG-KD 115 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~i~~t~nP~wne~f~f~~~~-~~~~~L~v~V~d~d~~-~d 115 (782)
.++.|.|+|++|++|+. |..|.+||||+|++++++++|+++++|+||+|||+|.|.+.. .....|.|+|||+|.. +|
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~d 470 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDD 470 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCC
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCC
Confidence 47899999999999998 989999999999999999999999999999999999998643 3568899999999998 88
Q ss_pred ceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEE
Q 045512 116 DFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWI 164 (782)
Q Consensus 116 ~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 164 (782)
|+||++.++|.. + ....|++|.. |+|++++.+
T Consensus 471 D~LG~~~~~L~~---g------~~~~~~~l~~--------G~l~~~~~~ 502 (540)
T 3nsj_A 471 DLLGSCDRSPHS---G------FHEVTCELNH--------GRVKFSYHA 502 (540)
T ss_dssp EEEEEEEECCCS---E------EEEEEEECSS--------SEEEEEEEE
T ss_pred CEEEEEEEEeeC---C------cEEEEEEcCC--------eEEEEEEEE
Confidence 999999999872 2 1457888642 888888754
No 78
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.55 E-value=2.1e-14 Score=136.72 Aligned_cols=117 Identities=20% Similarity=0.294 Sum_probs=87.4
Q ss_pred cceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECCEEEeecccc-CCCCCccccEEEEEEeCCCceEEEEEEeCCCCC
Q 045512 365 SIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGNKWIRTRTIL-DTLDPRWNEQYTWEVYDPCTVITIGVFDNCHVN 442 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~~T~~~~-~t~nP~wne~~~f~v~~~~~~l~i~V~d~~~~~ 442 (782)
..+.|.|+|++|++|.. .|. ||||+++ ++..||++++ ++.||+|||.|.|.+.+....|.|+|||+| ++
T Consensus 12 ~~~~L~V~V~~A~~l~~------~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~ 82 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI 82 (167)
T ss_dssp CCCEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SS
T ss_pred ceEEEEEEEEEEECCCC------CCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CC
Confidence 35899999999998841 355 9999999 3446777776 699999999999999987789999999999 66
Q ss_pred CCCCCcCCCccEEEEEecccccCCc------EEEEEEEceeeCCC--CC--ccccEEEEEEEEE
Q 045512 443 GSKDDAIDQRIGKVRIRLSTLETDR------LYTHYYPLLVLTPS--GL--KKNGELHLALRFT 496 (782)
Q Consensus 443 ~~~~~~~d~~lG~~~i~l~~l~~~~------~~~~~~~L~~~~~~--g~--~~~G~i~l~~~~~ 496 (782)
+|++||++.|+|+++.... ....||.+.....+ |. ...|.++++++|.
T Consensus 83 ------~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 83 ------WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp ------CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred ------CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 7999999999999985432 33445554432211 11 1145677777763
No 79
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.54 E-value=4.2e-14 Score=158.54 Aligned_cols=125 Identities=17% Similarity=0.251 Sum_probs=100.6
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECCEEEeeccccCCCCCccccEEEEEEeC--CCceEEEEEEeCCC
Q 045512 364 GSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGNKWIRTRTILDTLDPRWNEQYTWEVYD--PCTVITIGVFDNCH 440 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~~T~~~~~t~nP~wne~~~f~v~~--~~~~l~i~V~d~~~ 440 (782)
...|.|+|+|++|+||+. |. .|. ||||+|+++++.+||+++++++||+|||.|.|.+.+ ....|.|+|||+|.
T Consensus 391 ~~~~~L~V~V~~A~~L~~-D~---~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG-DY---TTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp TTEEEEEEEEEEEESCCC-SS---CSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred CcccEEEEEEEEccCCCc-cc---CCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 347899999999999986 53 366 999999999999999999999999999999999753 56789999999998
Q ss_pred CCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceeeCCCCCccccEEEEEEEEEECchhhHHhhcCCCCCC
Q 045512 441 VNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVLTPSGLKKNGELHLALRFTCTAWVSMVTKYGMPLLP 513 (782)
Q Consensus 441 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~~~~~~~~~~~~p~~p 513 (782)
.+ +||+||++.++|.. | ....|++|. .|.|++.+++.+. +++-..++.--.|
T Consensus 467 ~~------~dD~LG~~~~~L~~---g-~~~~~~~l~---------~G~l~~~~~~~c~--p~l~g~~c~~y~~ 518 (540)
T 3nsj_A 467 GW------DDDLLGSCDRSPHS---G-FHEVTCELN---------HGRVKFSYHAKCL--PHLTGGTCLEYAP 518 (540)
T ss_dssp SS------CCEEEEEEEECCCS---E-EEEEEEECS---------SSEEEEEEEEEEC--TTEESTTSCEECC
T ss_pred CC------CCCEEEEEEEEeeC---C-cEEEEEEcC---------CeEEEEEEEEEEC--CCCCCChhhhcCC
Confidence 76 78999999999983 3 367888863 3999998877663 3444444433333
No 80
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.54 E-value=2.2e-14 Score=163.45 Aligned_cols=118 Identities=25% Similarity=0.440 Sum_probs=101.2
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECCEEEeeccccCCCCCccccEEEEEEeCCC-ceEEEEEEeCCCC
Q 045512 364 GSIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGNKWIRTRTILDTLDPRWNEQYTWEVYDPC-TVITIGVFDNCHV 441 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~~T~~~~~t~nP~wne~~~f~v~~~~-~~l~i~V~d~~~~ 441 (782)
...|.|.|+|++|+||+++|. .|. ||||++.++++.++|+++++++||.|||.|.|.+..+. ..|.|+|||+|.+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~---~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKP---NGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCCST---TSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCCCC---CCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 457899999999999997653 466 99999999999999999999999999999999998754 5799999999987
Q ss_pred CCCCCCcCCCccEEEEEecccccCCcE----EEEEEEceeeCCCCCccccEEEEEEEEE
Q 045512 442 NGSKDDAIDQRIGKVRIRLSTLETDRL----YTHYYPLLVLTPSGLKKNGELHLALRFT 496 (782)
Q Consensus 442 ~~~~~~~~d~~lG~~~i~l~~l~~~~~----~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 496 (782)
+ +|++||++.++|.++..+.. ...|++|.. +..|+|++++++.
T Consensus 461 ~------~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~------~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 S------PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHE------VPTGEVWVRFDLQ 507 (510)
T ss_dssp S------SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBS------SSSCEEEEEEEEE
T ss_pred C------CCCceEEEEEEHHHhccccCCCCceeeeecCCC------CCCceEEEEEEEE
Confidence 6 89999999999999976543 678999864 2459999988774
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.53 E-value=6e-14 Score=161.09 Aligned_cols=119 Identities=24% Similarity=0.381 Sum_probs=103.8
Q ss_pred cccEEEEEEEEeecCCCCCC--CCCCCcEEEEEECC-----eeeeeccccCC-CCCeeccEEEEEeccCCCCeEEEEEEe
Q 045512 38 QMHYLFVNVVKARNLPVMDV--SGSLDPYVEVKLGN-----YKGIAKHLEKN-QNPVWNQIFAFSKERLQSNLVEVTVKD 109 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~--~g~~dPyv~v~~~~-----~~~~T~~i~~t-~nP~wne~f~f~~~~~~~~~L~v~V~d 109 (782)
..+.|.|+|++|++|+..+. .|.+||||+|.+.+ .+++|++++++ .||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 45789999999999999873 68999999999954 58899999997 999999999999887666799999999
Q ss_pred CCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEE
Q 045512 110 KDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWI 164 (782)
Q Consensus 110 ~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 164 (782)
+|.+ ++++||++.++|..|..+ .+|++|.+..|.....|.|.+.+.+
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G--------~r~v~L~d~~g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG--------YRHVHLLSKNGDQHPSATLFVKISI 622 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE--------EEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCC--------cEEEeCCCCCcCCCCceEEEEEEEE
Confidence 9998 999999999999999753 3699999988876444888888866
No 82
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.46 E-value=7.9e-14 Score=160.97 Aligned_cols=106 Identities=25% Similarity=0.414 Sum_probs=94.9
Q ss_pred cccEEEEEEEEeecCCC---CCCCCCCCcEEEEEECC---eeeeeccccCCCCCeeccEEEEEeccCCCCeEEEEEEeCC
Q 045512 38 QMHYLFVNVVKARNLPV---MDVSGSLDPYVEVKLGN---YKGIAKHLEKNQNPVWNQIFAFSKERLQSNLVEVTVKDKD 111 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~---~d~~g~~dPyv~v~~~~---~~~~T~~i~~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d 111 (782)
+.+.|.|+|++|++|+. +|..|.+||||+|++++ .+++|+++++|+||+|||+|.|.+.......|.|+|||+|
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D 95 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 95 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECC
Confidence 57899999999999998 78789999999999984 6889999999999999999999998766789999999999
Q ss_pred CCCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecC
Q 045512 112 IGKDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDR 148 (782)
Q Consensus 112 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (782)
.++|++||++.++|.++..+.. ...|++|...
T Consensus 96 ~~~ddfIG~v~I~L~~L~~g~~-----~~~w~~L~~~ 127 (749)
T 1cjy_A 96 YVMDETLGTATFTVSSMKVGEK-----KEVPFIFNQV 127 (749)
T ss_dssp SSSCEEEEEECCBSTTSCTTCC-----CCEEEEETTT
T ss_pred CCCCceeEEEEEEHHHcCCCCc-----eEEEEecCCC
Confidence 8889999999999999976542 5699999753
No 83
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.45 E-value=5.4e-15 Score=165.62 Aligned_cols=124 Identities=18% Similarity=0.337 Sum_probs=21.2
Q ss_pred cceEEEEEEEEeeCCCCCCCCCCCCCCcEEEEEECCE-EEeeccccCC---CCCccccEEEEEEeCCCceEEEEEEeC-C
Q 045512 365 SIGILELGILSAKNLMPMTSKDGKLTDAYCVAKYGNK-WIRTRTILDT---LDPRWNEQYTWEVYDPCTVITIGVFDN-C 439 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~~-~~~T~~~~~t---~nP~wne~~~f~v~~~~~~l~i~V~d~-~ 439 (782)
..|.|+|+|++|+||+++| ||||+++++++ +.||+++++| +||+|||.|+|.+......|.|+|||+ |
T Consensus 9 ~~~~L~V~VieAk~L~~~d-------dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d 81 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-------RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSD 81 (483)
T ss_dssp EEECC----------------------------------------------------CCEECC-----------------
T ss_pred eccEEEEEEEEcCCcCCCC-------CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCC
Confidence 4578999999999998543 89999999876 6799999999 999999999999765567899999994 4
Q ss_pred CCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceeeCC---------------------CCCccccEEEEEEEEEEC
Q 045512 440 HVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVLTP---------------------SGLKKNGELHLALRFTCT 498 (782)
Q Consensus 440 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~---------------------~g~~~~G~i~l~~~~~~~ 498 (782)
.. ++.++|++||++.|++.++..++..++||+|...+. +|.+..|.|+|+++|...
T Consensus 82 ~~---~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 82 KK---RKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTM 158 (483)
T ss_dssp ----------------------------CCEECC--------------------------------------CEEEEEEC
T ss_pred cc---ccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeee
Confidence 20 011279999999999999998888899999976543 122346899999988654
No 84
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.44 E-value=4.7e-13 Score=153.63 Aligned_cols=119 Identities=19% Similarity=0.286 Sum_probs=98.5
Q ss_pred cceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECC-----EEEeeccccCC-CCCccccEEEEEEeCCC-ceEEEEEE
Q 045512 365 SIGILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGN-----KWIRTRTILDT-LDPRWNEQYTWEVYDPC-TVITIGVF 436 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~-----~~~~T~~~~~t-~nP~wne~~~f~v~~~~-~~l~i~V~ 436 (782)
..+.|+|+|++|++|++++.. ..+. ||||+|.+.+ .+.||++++++ +||+|||+|+|.+..+. ..|+|+||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~-~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKN-KNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSC-SSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCccccc-ccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 568999999999999977531 2456 9999999944 68999999998 99999999999998763 68999999
Q ss_pred eCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceeeCCCCCc-cccEEEEEEEE
Q 045512 437 DNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVLTPSGLK-KNGELHLALRF 495 (782)
Q Consensus 437 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~i~l~~~~ 495 (782)
|+|.++ +|++||++.|+|..|..|. +|++|.+.. |.. ..|+|.+.+++
T Consensus 574 D~D~~~------~dd~iG~~~ipl~~L~~G~---r~v~L~d~~--g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 574 DYDSSS------KNDFIGQSTIPWNSLKQGY---RHVHLLSKN--GDQHPSATLFVKISI 622 (624)
T ss_dssp ECCSSS------CCEEEEEEEEEGGGBCCEE---EEEEEECTT--SCEEEEEEEEEEEEE
T ss_pred EcCCCC------CCceeEEEEEEHHHcCCCc---EEEeCCCCC--cCCCCceEEEEEEEE
Confidence 999876 8999999999999998764 699997643 322 35788887766
No 85
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.30 E-value=2e-13 Score=152.98 Aligned_cols=100 Identities=21% Similarity=0.353 Sum_probs=13.0
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe-eeeeccccCC---CCCeeccEEEEEeccCCCCeEEEEEEeC-C--
Q 045512 39 MHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNY-KGIAKHLEKN---QNPVWNQIFAFSKERLQSNLVEVTVKDK-D-- 111 (782)
Q Consensus 39 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~-~~~T~~i~~t---~nP~wne~f~f~~~~~~~~~L~v~V~d~-d-- 111 (782)
.+.|.|+|++|++|+++| ||||+++++++ ..||+++++| +||+|||+|.|.+... ...|.|+|||. |
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDSDKK 83 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecCCcc
Confidence 357999999999999877 99999999986 6799999999 9999999999986543 57899999995 4
Q ss_pred -CC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 045512 112 -IG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRK 149 (782)
Q Consensus 112 -~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
.. +|++||++.|++.++..+. ..++||+|.++.
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~-----~~~~W~~L~~~~ 118 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRH-----FTEQWYPVTLPT 118 (483)
T ss_dssp ----------------------------CCEECC------
T ss_pred ccCCCCceEEEEEEEHHHhcCCC-----CCCeEEECCCCC
Confidence 24 8999999999999998653 267999996544
No 86
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.28 E-value=5.4e-12 Score=145.73 Aligned_cols=107 Identities=23% Similarity=0.300 Sum_probs=94.6
Q ss_pred CceEEEEEEEEEeeCCCC---CCCCCCCCcEEEEEECC---eeeecccccCCCCCCcccceeEEEecCCCCCeEEEEEEE
Q 045512 199 PKLYYLRVFVFEAQDLVP---SEEGRAPDAYVKIQLGN---LVRVTRPSHVRSVNPVWNEEHMFVASEPFEDLIIVTVED 272 (782)
Q Consensus 199 p~~~~L~V~V~~a~~L~~---~d~~g~~dpyv~v~lg~---~~~kT~~~~~~t~nP~wne~f~f~v~~~~~~~L~i~V~d 272 (782)
+..+.|+|+|++|++|+. +|..|.+||||++.+++ ++++|+++++ +.||+|||+|.|.+.......|.|+|||
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~-tlNPvWNEtF~F~v~~~~~~~L~~~V~D 93 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPNQENVLEITLMD 93 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTTSCCBCEEEEEE
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcC-CCCCeeeeEEEEEecCCCCCEEEEEEEE
Confidence 456789999999999998 78888999999999984 6889999987 9999999999999987667789999999
Q ss_pred ccCCCCCceeEEEEEeCCCcccccCCCCCCCCeeEEccCC
Q 045512 273 RIGPGKDEILGREFIPVRNVPQRHETTKLPDPRWFNLHKP 312 (782)
Q Consensus 273 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 312 (782)
+|..+ |++||++.++|.++... .....|++|.+.
T Consensus 94 ~D~~~-ddfIG~v~I~L~~L~~g-----~~~~~w~~L~~~ 127 (749)
T 1cjy_A 94 ANYVM-DETLGTATFTVSSMKVG-----EKKEVPFIFNQV 127 (749)
T ss_dssp CCSSS-CEEEEEECCBSTTSCTT-----CCCCEEEEETTT
T ss_pred CCCCC-CceeEEEEEEHHHcCCC-----CceEEEEecCCC
Confidence 99988 99999999999998642 246789999865
No 87
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.21 E-value=4.8e-11 Score=139.98 Aligned_cols=112 Identities=17% Similarity=0.247 Sum_probs=94.3
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeccccC-CCCCeecc-EEEEE-eccCCCCeEEEEEEeC
Q 045512 40 HYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN------YKGIAKHLEK-NQNPVWNQ-IFAFS-KERLQSNLVEVTVKDK 110 (782)
Q Consensus 40 ~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~i~~-t~nP~wne-~f~f~-~~~~~~~~L~v~V~d~ 110 (782)
..|.|+|++|++|+.. .+||||+|.+.+ .+++|+++.+ +.||+||| +|.|. +..+....|+|+|||+
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 3799999999999853 689999999965 3579999986 59999999 69998 6655567899999999
Q ss_pred CCCCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEEcc
Q 045512 111 DIGKDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWIGT 166 (782)
Q Consensus 111 d~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 166 (782)
| +++||++.++|..|..+ -++.+|.+..|.....|.|.+.+.+..
T Consensus 801 d---ddfiG~~~lpL~~L~~G--------yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 801 G---GKFVGHRILPVSAIRSG--------YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp T---TEEEEEEEEETTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred C---ccEEeeEEEEHHHcCCC--------ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 7 89999999999999764 357899999888755599999998764
No 88
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.21 E-value=7.5e-11 Score=137.71 Aligned_cols=112 Identities=16% Similarity=0.264 Sum_probs=95.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------eeeeeccccC-CCCCeeccE-EEEE-eccCCCCeEEEEEEe
Q 045512 40 HYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN-------YKGIAKHLEK-NQNPVWNQI-FAFS-KERLQSNLVEVTVKD 109 (782)
Q Consensus 40 ~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-------~~~~T~~i~~-t~nP~wne~-f~f~-~~~~~~~~L~v~V~d 109 (782)
+.|.|+|++|++|+.+ .+||||+|.+.+ ++++|+++++ +.||+|||+ |.|. +..++...|+|.|||
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 5899999999999853 689999999975 5679999986 589999998 9998 765556789999999
Q ss_pred CCCCCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEEcc
Q 045512 110 KDIGKDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWIGT 166 (782)
Q Consensus 110 ~d~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 166 (782)
++ +++||++.++|..|..+ -++.+|.+..|.....+.|.+.+.+..
T Consensus 726 ~d---ddfiG~~~ipL~~L~~G--------yR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 726 EN---GKFIGHRVMPLDGIKPG--------YRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp TT---SCEEEEEEEESTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred cC---CCeeeEEEEEHHHcCCc--------ceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 85 79999999999999764 367899999888765589988887763
No 89
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.19 E-value=2.7e-11 Score=142.11 Aligned_cols=105 Identities=31% Similarity=0.570 Sum_probs=92.0
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeccccCCCCCeeccEEEEEeccC-CCCeEEEEEEeCCC
Q 045512 39 MHYLFVNVVKARNLPVMDVSGSLDPYVEVKL-----GNYKGIAKHLEKNQNPVWNQIFAFSKERL-QSNLVEVTVKDKDI 112 (782)
Q Consensus 39 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~i~~t~nP~wne~f~f~~~~~-~~~~L~v~V~d~d~ 112 (782)
.+.|.|+|++|++|+.+|..|.+||||++++ +..+.+|+++++|+||+|||+|.|.+... ....|.|+|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4689999999999999999999999999999 33578999999999999999999998643 24569999999999
Q ss_pred C-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 045512 113 G-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRK 149 (782)
Q Consensus 113 ~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
. +|++||++.+++.++.... ...|+.|....
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~------~~~w~~Lls~~ 282 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAG------VDGWFKLLSQE 282 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCC------EEEEEECBCTT
T ss_pred ccccccccccccchhhhccCC------cccceeecccc
Confidence 9 9999999999999997643 47899997654
No 90
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.16 E-value=1.3e-10 Score=136.56 Aligned_cols=111 Identities=20% Similarity=0.274 Sum_probs=91.7
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeec-cccC-CCCCeecc-EEEE-EeccCCCCeEEEEEE
Q 045512 39 MHYLFVNVVKARNLPVMDVSGSLDPYVEVKLGN------YKGIAK-HLEK-NQNPVWNQ-IFAF-SKERLQSNLVEVTVK 108 (782)
Q Consensus 39 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~-~i~~-t~nP~wne-~f~f-~~~~~~~~~L~v~V~ 108 (782)
.+.|.|+|++|++|+. +.+||||+|.+.+ ++++|+ ++++ +.||+||| +|.| .+..+....|+|.||
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 4689999999999984 4689999999943 367999 8875 68999999 6999 776555578999999
Q ss_pred eCCCCCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEE
Q 045512 109 DKDIGKDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWI 164 (782)
Q Consensus 109 d~d~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 164 (782)
|++ +++||++.++|..|..+ -+|++|.+..|.....+.|.+.+.+
T Consensus 753 D~d---~d~iG~~~ipl~~L~~G--------~r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 753 EEG---NKFLGHRIIPINALNSG--------YHHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp ETT---TEEEEEEEEEGGGBCCE--------EEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EeC---CCccceEeeehhhcCCC--------cEEEeccCCCCCCCCceEEEEEEEE
Confidence 997 89999999999999753 3689999888876445788887755
No 91
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.07 E-value=1.6e-10 Score=135.44 Aligned_cols=103 Identities=23% Similarity=0.418 Sum_probs=89.4
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEE-----CCEEEeeccccCCCCCccccEEEEEEeC--CCceEEEEEEe
Q 045512 366 IGILELGILSAKNLMPMTSKDGKLT-DAYCVAKY-----GNKWIRTRTILDTLDPRWNEQYTWEVYD--PCTVITIGVFD 437 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~-----~~~~~~T~~~~~t~nP~wne~~~f~v~~--~~~~l~i~V~d 437 (782)
.+.|.|.|++|++|.++|. .|. ||||++.+ ...+.+|+++++++||.|||.|.|.+.. ....|.|+|||
T Consensus 171 ~~~L~V~v~~a~~L~~~d~---~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d 247 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDP---NGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWD 247 (674)
T ss_dssp SSEEEEEEEEEESCCCCST---TSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEE
T ss_pred cceeeeeeecccccCCCCc---ccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEee
Confidence 3789999999999998764 366 99999999 4467899999999999999999999874 34579999999
Q ss_pred CCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceee
Q 045512 438 NCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVL 478 (782)
Q Consensus 438 ~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 478 (782)
+|.++ +|++||.+.++++++..+. ...|++|...
T Consensus 248 ~d~~~------~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 248 WDLTS------RNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp CCSSS------CCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred ccccc------ccccccccccchhhhccCC-cccceeeccc
Confidence 99876 8999999999999997765 4899999763
No 92
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.05 E-value=8.9e-10 Score=128.69 Aligned_cols=110 Identities=21% Similarity=0.284 Sum_probs=88.3
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCCcEEEEEECC-------EEEeeccccC-CCCCccccE-EEEE-EeCC-CceEEEE
Q 045512 366 IGILELGILSAKNLMPMTSKDGKLTDAYCVAKYGN-------KWIRTRTILD-TLDPRWNEQ-YTWE-VYDP-CTVITIG 434 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~-------~~~~T~~~~~-t~nP~wne~-~~f~-v~~~-~~~l~i~ 434 (782)
.+.|.|+|++|++|+.. ..||||+|++.+ +++||+++++ ++||+|||+ |+|. |..+ ...|+|.
T Consensus 649 ~~~L~V~Visaq~L~~~------~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~ 722 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK------QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRII 722 (816)
T ss_dssp CEEEEEEEEEEECCCSS------CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEE
T ss_pred ceEEEEEEEEcccCCCC------CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEE
Confidence 47899999999999731 239999999965 6789999986 599999998 9998 7654 3589999
Q ss_pred EEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceeeCCCCCc-cccEEEEEEEEE
Q 045512 435 VFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVLTPSGLK-KNGELHLALRFT 496 (782)
Q Consensus 435 V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~i~l~~~~~ 496 (782)
|||++ +++||++.|+|+.|..|. +++||.+.. |.. ..++|.+.+.+.
T Consensus 723 V~D~d----------ddfiG~~~ipL~~L~~Gy---R~vpL~~~~--g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 723 VSEEN----------GKFIGHRVMPLDGIKPGY---RHVPLRNES--NRPLGLASVFAHIVAK 770 (816)
T ss_dssp EEETT----------SCEEEEEEEESTTCCCEE---EEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EEecC----------CCeeeEEEEEHHHcCCcc---eEEEEeCCC--CCCCCceEEEEEEEEE
Confidence 99974 689999999999998874 578998643 322 237888887765
No 93
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.02 E-value=6.6e-10 Score=130.42 Aligned_cols=110 Identities=19% Similarity=0.291 Sum_probs=87.7
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCCcEEEEEECC------EEEeeccccC-CCCCcccc-EEEEE-EeCC-CceEEEEE
Q 045512 366 IGILELGILSAKNLMPMTSKDGKLTDAYCVAKYGN------KWIRTRTILD-TLDPRWNE-QYTWE-VYDP-CTVITIGV 435 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~------~~~~T~~~~~-t~nP~wne-~~~f~-v~~~-~~~l~i~V 435 (782)
...|.|+|++|++|+. ...||||+|.+.+ .++||+++++ ++||+||| .|.|. |..+ ...|+|+|
T Consensus 724 ~~~L~V~Visaq~L~~------~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V 797 (885)
T 3ohm_B 724 ANALRVKVISGQFLSD------RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAA 797 (885)
T ss_dssp CEEEEEEEEEEESCCS------SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEE
T ss_pred ceEEEEEEEEeccCcc------cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEE
Confidence 3589999999999973 1249999999954 3579999987 59999999 69998 6554 35899999
Q ss_pred EeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceeeCCCCCc-cccEEEEEEEEE
Q 045512 436 FDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVLTPSGLK-KNGELHLALRFT 496 (782)
Q Consensus 436 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~i~l~~~~~ 496 (782)
||+| |++||++.|+|+.|..|. +++||.+.. |.. ..|.|.+.+.+.
T Consensus 798 ~D~d----------ddfiG~~~lpL~~L~~Gy---R~vpL~~~~--g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 798 FEEG----------GKFVGHRILPVSAIRSGY---HYVCLRNEA--NQPLCLPALLIYTEAS 844 (885)
T ss_dssp EETT----------TEEEEEEEEETTTCCCEE---EEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EcCC----------ccEEeeEEEEHHHcCCCc---eEEEecCCC--CCccCceEEEEEEEEE
Confidence 9975 689999999999998874 468887643 322 358899988875
No 94
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.00 E-value=1.3e-09 Score=128.08 Aligned_cols=111 Identities=16% Similarity=0.303 Sum_probs=85.9
Q ss_pred cceEEEEEEEEeeCCCCCCCCCCCCCCcEEEEEECC------EEEeec-cccC-CCCCcccc-EEEE-EEeCC-CceEEE
Q 045512 365 SIGILELGILSAKNLMPMTSKDGKLTDAYCVAKYGN------KWIRTR-TILD-TLDPRWNE-QYTW-EVYDP-CTVITI 433 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~------~~~~T~-~~~~-t~nP~wne-~~~f-~v~~~-~~~l~i 433 (782)
..|.|.|+|++|++|+. ...||||+|.+.+ +++||+ ++++ ++||+||| .|.| .|..+ ...|+|
T Consensus 676 ~~~~L~V~Visa~~L~~------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~ 749 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRV 749 (799)
T ss_dssp TCEEEEEEEEEEESCCS------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEE
T ss_pred eeeeEEEEEEeccccCc------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEE
Confidence 46799999999999983 1239999999932 367999 8875 59999999 6999 78654 348999
Q ss_pred EEEeCCCCCCCCCCcCCCccEEEEEecccccCCcEEEEEEEceeeCCCCCccccEEEEEEEE
Q 045512 434 GVFDNCHVNGSKDDAIDQRIGKVRIRLSTLETDRLYTHYYPLLVLTPSGLKKNGELHLALRF 495 (782)
Q Consensus 434 ~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~ 495 (782)
.|||++ +++||++.|+|+.|..|. +|++|.+..... -..+.|.+.+++
T Consensus 750 ~V~D~d----------~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~-~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 750 AVMEEG----------NKFLGHRIIPINALNSGY---HHLCLHSESNMP-LTMPALFIFLEM 797 (799)
T ss_dssp EEEETT----------TEEEEEEEEEGGGBCCEE---EEEEEECTTCCE-EEEEEEEEEEEE
T ss_pred EEEEeC----------CCccceEeeehhhcCCCc---EEEeccCCCCCC-CCceEEEEEEEE
Confidence 999975 689999999999998763 588987643211 124777777665
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.85 E-value=1.4e-08 Score=88.25 Aligned_cols=113 Identities=14% Similarity=0.261 Sum_probs=87.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe----eeee-ccccCCCCCeeccEEEEEeccCCCCeEEEEEEeCCCCC
Q 045512 40 HYLFVNVVKARNLPVMDVSGSLDPYVEVKLGNY----KGIA-KHLEKNQNPVWNQIFAFSKERLQSNLVEVTVKDKDIGK 114 (782)
Q Consensus 40 ~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~----~~~T-~~i~~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d~~~ 114 (782)
..|+|.+.++.--+-+......||||.|.+... +.+| .+.++|..|+|||.|.-.+.+ +..|.|.|++...
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT--
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC--
Confidence 478999988765333333457899999999863 3465 788899999999999999888 6889999997654
Q ss_pred CceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEE
Q 045512 115 DDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWI 164 (782)
Q Consensus 115 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 164 (782)
+|++.|.|.+.+|..+-........-|..|++. |.|++.+.+
T Consensus 82 -~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP~-------Gkl~~~i~~ 123 (126)
T 1yrk_A 82 -EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQ-------AKVLMSVQY 123 (126)
T ss_dssp -EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBSS-------CEEEEEEEE
T ss_pred -CeeeEEEEEHHHHHhhhccCCCceEEEEecccC-------cEEEEEEEE
Confidence 999999999999985411111246789999862 899988854
No 96
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.80 E-value=7.6e-08 Score=83.61 Aligned_cols=105 Identities=16% Similarity=0.344 Sum_probs=82.1
Q ss_pred eEEEEEEEEee--CCCCCCCCCCCCC-CcEEEEEECCEE----Eee-ccccCCCCCccccEEEEEEeCCCceEEEEEEeC
Q 045512 367 GILELGILSAK--NLMPMTSKDGKLT-DAYCVAKYGNKW----IRT-RTILDTLDPRWNEQYTWEVYDPCTVITIGVFDN 438 (782)
Q Consensus 367 g~l~v~v~~a~--~L~~~~~~~~~~~-dpyv~v~~~~~~----~~T-~~~~~t~nP~wne~~~f~v~~~~~~l~i~V~d~ 438 (782)
..|+|...++. .|++. ... ||||.|.+.... .+| .++++|..|.|||.|.-.|.+ ...|.|.||+.
T Consensus 6 ~flRi~~~~~~~~~~~~~-----~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~ 79 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAE-----DEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRA 79 (126)
T ss_dssp CEEEEEEEEEECSSCCCS-----SSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEE
T ss_pred ccEEeeeccccccccCCc-----cccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcC
Confidence 57788775555 23321 123 999999986533 265 788899999999999999886 57999999975
Q ss_pred CCCCCCCCCcCCCccEEEEEeccccc-----CCcEEEEEEEceeeCCCCCccccEEEEEEEE
Q 045512 439 CHVNGSKDDAIDQRIGKVRIRLSTLE-----TDRLYTHYYPLLVLTPSGLKKNGELHLALRF 495 (782)
Q Consensus 439 ~~~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~ 495 (782)
. .++++.+.|++.+|. .+...+-|++|.. .|+|++.+++
T Consensus 80 a----------~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--------~Gkl~~~i~~ 123 (126)
T 1yrk_A 80 A----------EEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--------QAKVLMSVQY 123 (126)
T ss_dssp T----------TEEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--------SCEEEEEEEE
T ss_pred C----------CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc--------CcEEEEEEEE
Confidence 3 389999999999996 4567889999964 6999999886
No 97
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.78 E-value=1.4e-08 Score=89.34 Aligned_cols=114 Identities=17% Similarity=0.406 Sum_probs=89.0
Q ss_pred cEEEEEEEEeecCCCCC-CCCCCCcEEEEEECCe----eeee-ccccCCCCCeeccEEEEEeccCCCCeEEEEEEeCCCC
Q 045512 40 HYLFVNVVKARNLPVMD-VSGSLDPYVEVKLGNY----KGIA-KHLEKNQNPVWNQIFAFSKERLQSNLVEVTVKDKDIG 113 (782)
Q Consensus 40 ~~L~V~v~~a~~L~~~d-~~g~~dPyv~v~~~~~----~~~T-~~i~~t~nP~wne~f~f~~~~~~~~~L~v~V~d~d~~ 113 (782)
..|+|.+.++.--+.+. .....||||.|.+... +.+| .+.++|..|+|||.|.-.+.+ +..|.|.|++...
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 86 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKNV- 86 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSSC-
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCCC-
Confidence 47999998887655432 2357899999999863 3678 778889999999999999888 6889999996654
Q ss_pred CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEEc
Q 045512 114 KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWIG 165 (782)
Q Consensus 114 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 165 (782)
+|++.|.|.+.+|..+-........-|+.|++. |.|++.+.+.
T Consensus 87 --~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP~-------Gkl~v~i~~~ 129 (138)
T 2enj_A 87 --DLISETTVELYSLAERCRKNNGKTEIWLELKPQ-------GRMLMNARYF 129 (138)
T ss_dssp --SCCEEEEEESHHHHHHHHHTTTCEEEEEECBSS-------CEEEEEEEEC
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEecccC-------cEEEEEEEEE
Confidence 899999999999985410001236899999862 9999998765
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.76 E-value=5.5e-08 Score=85.60 Aligned_cols=108 Identities=15% Similarity=0.197 Sum_probs=83.0
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEECCE-E---Eee-ccccCCCCCccccEEEEEEeCCCceEEEEEEeCCC
Q 045512 367 GILELGILSAKNLMPMTSKDGKLT-DAYCVAKYGNK-W---IRT-RTILDTLDPRWNEQYTWEVYDPCTVITIGVFDNCH 440 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~-~---~~T-~~~~~t~nP~wne~~~f~v~~~~~~l~i~V~d~~~ 440 (782)
+.|+|...++.-.+-+.. .... ||||.|.+... . .+| .++++|..|.|||.|.-.|.+ ...|.|.||+..
T Consensus 10 ~flRi~l~~~~~~~~~~~--~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a- 85 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSC--QGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGKN- 85 (138)
T ss_dssp CCEEEEEEEEECCCCCCS--CCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECSS-
T ss_pred cceEEEeeccccCCCCCc--ccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcCC-
Confidence 577887766653221110 1124 99999998653 2 677 778889999999999999886 579999999643
Q ss_pred CCCCCCCcCCCccEEEEEeccccc-----CCcEEEEEEEceeeCCCCCccccEEEEEEEE
Q 045512 441 VNGSKDDAIDQRIGKVRIRLSTLE-----TDRLYTHYYPLLVLTPSGLKKNGELHLALRF 495 (782)
Q Consensus 441 ~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~ 495 (782)
.++++.+.|++.+|. .+...+-|++|.. .|+|++.+++
T Consensus 86 ---------~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--------~Gkl~v~i~~ 128 (138)
T 2enj_A 86 ---------VDLISETTVELYSLAERCRKNNGKTEIWLELKP--------QGRMLMNARY 128 (138)
T ss_dssp ---------CSCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--------SCEEEEEEEE
T ss_pred ---------CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc--------CcEEEEEEEE
Confidence 389999999999996 4567789999964 6999999987
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=92.37 E-value=0.5 Score=42.92 Aligned_cols=127 Identities=13% Similarity=0.115 Sum_probs=84.7
Q ss_pred ccccccEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC--Ce-eeeeccccCCCCCeeccEEEEEecc-------CCCCeE
Q 045512 35 LVEQMHYLFVNVVKARNLPVMD-VSGSLDPYVEVKLG--NY-KGIAKHLEKNQNPVWNQIFAFSKER-------LQSNLV 103 (782)
Q Consensus 35 ~~~~~~~L~V~v~~a~~L~~~d-~~g~~dPyv~v~~~--~~-~~~T~~i~~t~nP~wne~f~f~~~~-------~~~~~L 103 (782)
+.+..+.+.|+|.++.--+..- ..+..+|..-+++. +. ...|.++. +.+|.+|-+-.|.+.. ++...+
T Consensus 13 l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 13 LERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred ccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 3344568899999987422211 12345776666654 54 44555554 8999999999998742 235689
Q ss_pred EEEEEeCCCCCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEEcc
Q 045512 104 EVTVKDKDIGKDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWIGT 166 (782)
Q Consensus 104 ~v~V~d~d~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 166 (782)
.++++......-..||.+.|+|.++..+.. ....-.+|....|.....|.|...+.+..
T Consensus 92 ~lELhqa~g~~~~tla~~~I~l~~lLe~~~----~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 92 TLEVHQAYSTEYETIAACQLKFHEILEKSG----RIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEECSSCEEEEEEEEECCSHHHHCCS----CEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEEEEeeCCCceEEEEEEEEhHHhhCcCC----ceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 999988865466899999999999986532 13344578777764223499888876653
No 100
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=86.14 E-value=3.5 Score=48.96 Aligned_cols=69 Identities=14% Similarity=0.216 Sum_probs=51.2
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----eeeeccccCCCCCeeccEEEEEec---cCCCCeEEEEEEeC
Q 045512 40 HYLFVNVVKARNLPVMDVSGSLDPYVEVKL--GNY----KGIAKHLEKNQNPVWNQIFAFSKE---RLQSNLVEVTVKDK 110 (782)
Q Consensus 40 ~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~--~~~----~~~T~~i~~t~nP~wne~f~f~~~---~~~~~~L~v~V~d~ 110 (782)
..+.|+|..+.++... ..++-||.+.+ |++ ...|+.+....+|.|||.+.|++. -+.+..|.|.||+.
T Consensus 217 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp SEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred CceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 3799999999999764 34677877665 553 345666666789999999999863 34578999999996
Q ss_pred C
Q 045512 111 D 111 (782)
Q Consensus 111 d 111 (782)
.
T Consensus 294 ~ 294 (940)
T 2wxf_A 294 V 294 (940)
T ss_dssp C
T ss_pred c
Confidence 3
No 101
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=85.44 E-value=8.7 Score=36.93 Aligned_cols=76 Identities=14% Similarity=0.235 Sum_probs=48.9
Q ss_pred eeeeccccCCCCCeeccEEEEEec--cCCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 045512 73 KGIAKHLEKNQNPVWNQIFAFSKE--RLQSNLVEVTVKDKDIG-KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRK 149 (782)
Q Consensus 73 ~~~T~~i~~t~nP~wne~f~f~~~--~~~~~~L~v~V~d~d~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
.++|.|.+.+.+|.|+|++.+.+. .....-|.|.++....- +.+ ..+....-.|.+|....
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~d----------------k~E~pfg~a~lPL~~~d 141 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKD----------------KSEKIFALAFVKLMRYD 141 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCC----------------CCCCEEEEEEEESBCTT
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEeccccccc----------------ccCCeeEEEEEEcccCC
Confidence 567888889999999999998865 34467899999886542 100 01112334567776655
Q ss_pred CCcccceEEEEEEEE
Q 045512 150 GDKITQGEIMLAVWI 164 (782)
Q Consensus 150 ~~~~~~G~l~l~~~~ 164 (782)
|.....|.-.|-++-
T Consensus 142 G~~L~DG~H~L~vyk 156 (220)
T 3l4c_A 142 GTTLRDGEHDLIVYK 156 (220)
T ss_dssp SCBCCSEEEEEEEEE
T ss_pred CcEEccCCEEEEEEE
Confidence 543223777776644
No 102
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=84.84 E-value=5.5 Score=47.70 Aligned_cols=107 Identities=14% Similarity=0.215 Sum_probs=70.4
Q ss_pred EecccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----eeeeccccCCCCCeeccEEEEEec---cCCCCe
Q 045512 32 SYDLVEQMHYLFVNVVKARNLPVMDVSGSLDPYVEVKL--GNY----KGIAKHLEKNQNPVWNQIFAFSKE---RLQSNL 102 (782)
Q Consensus 32 ~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~--~~~----~~~T~~i~~t~nP~wne~f~f~~~---~~~~~~ 102 (782)
.+++.+ .++|+|..+.++.... ....+-||.+.+ |++ ..+|+.+. ..+|.|||.+.|++. -+....
T Consensus 350 lw~~~~---~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~ar 424 (1091)
T 3hhm_A 350 LWVINS---ALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAAR 424 (1091)
T ss_dssp GGGCCS---EEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCE
T ss_pred hhhCCC---CEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcE
Confidence 345543 7899999999887543 345677888777 443 34555444 467889999999863 345789
Q ss_pred EEEEEEeCCCC-----CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCcccceEEEEEEEE
Q 045512 103 VEVTVKDKDIG-----KDDFVGRVTFDLFEVPHRVPPDSPLAPQWYRLEDRKGDKITQGEIMLAVWI 164 (782)
Q Consensus 103 L~v~V~d~d~~-----~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 164 (782)
|.|.||+.... ....||-+.++|-+.. |.-. .|...+.+|-
T Consensus 425 L~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~--------------------~~L~-~G~~~L~lW~ 470 (1091)
T 3hhm_A 425 LCLSICSVKGRKGAKEEHCPLAWGNINLFDYT--------------------DTLV-SGKMALNLWP 470 (1091)
T ss_dssp EEEEECCCCCCC-------CCEEEEEESBCTT--------------------CBBC-CEEEEEECEE
T ss_pred EEEEEEEecCccCcccccceeEEeeeeeEccC--------------------CeEE-cCCeEEEeec
Confidence 99999997653 1235666666655432 2212 3888888885
No 103
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=82.40 E-value=4.7 Score=36.56 Aligned_cols=125 Identities=12% Similarity=0.163 Sum_probs=77.9
Q ss_pred CcceEEEEEEEEeeCCCCCCCCCCCCCCc--EEEEEECCEEEeeccccCCCCCccccEEEEEEeCC--------CceEEE
Q 045512 364 GSIGILELGILSAKNLMPMTSKDGKLTDA--YCVAKYGNKWIRTRTILDTLDPRWNEQYTWEVYDP--------CTVITI 433 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~dp--yv~v~~~~~~~~T~~~~~t~nP~wne~~~f~v~~~--------~~~l~i 433 (782)
+.-+.++|.|.++. +.+......+..+| ||.+.+-.....+..+....+|.+|-+-.+.|.-. ...+.|
T Consensus 15 ~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 44578888888876 32210000011244 55555545444444444589999999888888521 236888
Q ss_pred EEEeCCCCCCCCCCcCCCccEEEEEeccccc-CCcEEEEEEEceeeCCCCCccccEEEEEEEEEE
Q 045512 434 GVFDNCHVNGSKDDAIDQRIGKVRIRLSTLE-TDRLYTHYYPLLVLTPSGLKKNGELHLALRFTC 497 (782)
Q Consensus 434 ~V~d~~~~~~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~ 497 (782)
++..... ..-..||+++|+|.++. ....+....+|.+... +...-|.|...+++..
T Consensus 94 ELhqa~g-------~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g-~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 94 EVHQAYS-------TEYETIAACQLKFHEILEKSGRIFCTASLIGTKG-DIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEECS-------SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSS-CCTTSEEEEEEEEEEE
T ss_pred EEEEeeC-------CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCC-CcceEEEEEEEEEEec
Confidence 8887542 25678999999999985 3444556677876432 1124699999998854
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=81.36 E-value=5.7 Score=47.15 Aligned_cols=92 Identities=12% Similarity=0.257 Sum_probs=61.8
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCCcEEEEEE--CCEE----EeeccccCCCCCccccEEEEEEe--C-C-CceEEEEEE
Q 045512 367 GILELGILSAKNLMPMTSKDGKLTDAYCVAKY--GNKW----IRTRTILDTLDPRWNEQYTWEVY--D-P-CTVITIGVF 436 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~--~~~~----~~T~~~~~t~nP~wne~~~f~v~--~-~-~~~l~i~V~ 436 (782)
..++|+|..+.++...+ ..+-||.+.+ |++. ..|..+....+|.|||.++|++. + | ...|.|+||
T Consensus 217 ~~f~i~i~~~~~~~~~~-----~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 217 QPFSIELIEGRKVNADE-----RMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp SEEEEEEEEEECCCC--------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred CceEEEEEEecccCCCC-----CceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 57999999999986321 1277877755 6654 45555555778999999999887 3 3 678999999
Q ss_pred eCCCC--C---CC-CCCcCCCccEEEEEecccc
Q 045512 437 DNCHV--N---GS-KDDAIDQRIGKVRIRLSTL 463 (782)
Q Consensus 437 d~~~~--~---~~-~~~~~d~~lG~~~i~l~~l 463 (782)
+...- + .+ +....+..||.+.++|-+-
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECC
Confidence 96431 1 00 0111345999999999874
No 105
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=79.29 E-value=5.2 Score=38.48 Aligned_cols=59 Identities=10% Similarity=0.128 Sum_probs=41.5
Q ss_pred EEEeeccccCCCCCccccEEEEEEeC---CCceEEEEEEeCCCCCCCCCCcCCCccEEEEEecc
Q 045512 401 KWIRTRTILDTLDPRWNEQYTWEVYD---PCTVITIGVFDNCHVNGSKDDAIDQRIGKVRIRLS 461 (782)
Q Consensus 401 ~~~~T~~~~~t~nP~wne~~~f~v~~---~~~~l~i~V~d~~~~~~~~~~~~d~~lG~~~i~l~ 461 (782)
..++|.|.+++.+|.|+|++.+.++. +..-|.+++++...-.. ++..+..+|.+.+||-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k--~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDS--KDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSS--CCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEeccccc--ccccCCeeEEEEEEcc
Confidence 35789999999999999999999984 35579999988653210 1113346676666654
No 106
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=78.88 E-value=7.6 Score=46.53 Aligned_cols=91 Identities=19% Similarity=0.272 Sum_probs=61.3
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEE--CCEE----EeeccccCCCCCccccEEEEEEe--C-C-CceEEEE
Q 045512 366 IGILELGILSAKNLMPMTSKDGKLT-DAYCVAKY--GNKW----IRTRTILDTLDPRWNEQYTWEVY--D-P-CTVITIG 434 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~--~~~~----~~T~~~~~t~nP~wne~~~f~v~--~-~-~~~l~i~ 434 (782)
...++|+|+.+.++... .... +-||.+.+ |++. .+|+.+. ..+|.|||.++|++. + | .+.|.|+
T Consensus 354 ~~~f~v~i~~~~~~n~~----~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~t 428 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVN----IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLS 428 (1091)
T ss_dssp CSEEEEEEEEESCCCCC----CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEE
T ss_pred CCCEEEEEEEecCCCCC----ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEE
Confidence 46899999999988632 1223 78888876 5543 4444433 457889999999986 3 3 6799999
Q ss_pred EEeCCCCCCCCCCcCCCccEEEEEecccc
Q 045512 435 VFDNCHVNGSKDDAIDQRIGKVRIRLSTL 463 (782)
Q Consensus 435 V~d~~~~~~~~~~~~d~~lG~~~i~l~~l 463 (782)
||+..... +....+..||.+.++|-+-
T Consensus 429 l~~~~~~~--~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 429 ICSVKGRK--GAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp ECCCCCCC---------CCEEEEEESBCT
T ss_pred EEEecCcc--CcccccceeEEeeeeeEcc
Confidence 99976421 1112456899999999874
No 107
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=73.48 E-value=13 Score=44.14 Aligned_cols=70 Identities=14% Similarity=0.192 Sum_probs=48.0
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---eeeeccccCCCCCeeccEEEEEec---cCCCCeEEEEEEeCC
Q 045512 41 YLFVNVVKARNLPVMDVSGSLDPYVEVKL--GNY---KGIAKHLEKNQNPVWNQIFAFSKE---RLQSNLVEVTVKDKD 111 (782)
Q Consensus 41 ~L~V~v~~a~~L~~~d~~g~~dPyv~v~~--~~~---~~~T~~i~~t~nP~wne~f~f~~~---~~~~~~L~v~V~d~d 111 (782)
.++|+|+.+....... +..++-||++.+ |++ ..+|..+.-+.+|.|||.+.|++. -+.+..|.|.||+..
T Consensus 219 ~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 219 KFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp EEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred ceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 6888999887522111 235677877654 654 234655556778999999999753 345789999999854
No 108
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=69.29 E-value=4.1 Score=49.04 Aligned_cols=69 Identities=13% Similarity=0.193 Sum_probs=50.9
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEE--ECCe----eeeeccccCCCCCeeccEEEEEec---cCCCCeEEEEEEeC
Q 045512 40 HYLFVNVVKARNLPVMDVSGSLDPYVEVK--LGNY----KGIAKHLEKNQNPVWNQIFAFSKE---RLQSNLVEVTVKDK 110 (782)
Q Consensus 40 ~~L~V~v~~a~~L~~~d~~g~~dPyv~v~--~~~~----~~~T~~i~~t~nP~wne~f~f~~~---~~~~~~L~v~V~d~ 110 (782)
..++|+|..+.++... ..++-||.+. .|++ ..+|+.+..+.+|.|||.+.|++. -+....|.|.||+.
T Consensus 353 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp SEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred CCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 3799999999999764 3456776644 4664 345666666778999999999863 34578999999997
Q ss_pred C
Q 045512 111 D 111 (782)
Q Consensus 111 d 111 (782)
.
T Consensus 430 ~ 430 (1092)
T 2y3a_A 430 L 430 (1092)
T ss_dssp -
T ss_pred c
Confidence 4
No 109
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=67.18 E-value=6.3 Score=47.45 Aligned_cols=93 Identities=15% Similarity=0.226 Sum_probs=59.2
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCCcEEEE--EECCEE----EeeccccCCCCCccccEEEEEEe--C-C-CceEEEEE
Q 045512 366 IGILELGILSAKNLMPMTSKDGKLTDAYCVA--KYGNKW----IRTRTILDTLDPRWNEQYTWEVY--D-P-CTVITIGV 435 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v--~~~~~~----~~T~~~~~t~nP~wne~~~f~v~--~-~-~~~l~i~V 435 (782)
...++|+|..+.++...+ ..+-||.+ ..|++. ..|..+.-+.+|.|||.++|++. + | ...|.|+|
T Consensus 352 ~~~f~i~i~~~~~~~~~~-----~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTEE-----TVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAV 426 (1092)
T ss_dssp CSEEEEEECCCCCCCCCS-----SCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEEC
T ss_pred CCCEEEEEEEeccCCCCC-----CceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEE
Confidence 468999999999986421 12777665 447765 34555555778999999999886 3 3 66899999
Q ss_pred EeCCCCCCCC----------------CCcCCCccEEEEEecccc
Q 045512 436 FDNCHVNGSK----------------DDAIDQRIGKVRIRLSTL 463 (782)
Q Consensus 436 ~d~~~~~~~~----------------~~~~d~~lG~~~i~l~~l 463 (782)
|+......+. ..+.+..||.+.++|-+-
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 427 YAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp CCC------------------------------CCEEEEESBCT
T ss_pred EEecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 9964221110 012245899999998774
No 110
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=62.38 E-value=25 Score=41.83 Aligned_cols=93 Identities=15% Similarity=0.138 Sum_probs=58.1
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCC-CcEEEEEE--CCEE---EeeccccCCCCCccccEEEEEEe--C-C-CceEEEEEE
Q 045512 367 GILELGILSAKNLMPMTSKDGKLT-DAYCVAKY--GNKW---IRTRTILDTLDPRWNEQYTWEVY--D-P-CTVITIGVF 436 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~--~~~~---~~T~~~~~t~nP~wne~~~f~v~--~-~-~~~l~i~V~ 436 (782)
..++|.|..+...... .+.. +-||.+.+ |++. .+|..+.-+.+|.|||.++|++. + | ...|.|+||
T Consensus 218 ~~f~i~i~~~~~~~~~----~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 293 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP----RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIY 293 (961)
T ss_dssp SEEEEEEEEEECSSCC----TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred CceEEEEeeccccccc----CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEE
Confidence 5688888887652100 1124 78887754 6654 34554444668999999999886 3 3 668999999
Q ss_pred eCCCCCCC----------CCCcCCCccEEEEEecccc
Q 045512 437 DNCHVNGS----------KDDAIDQRIGKVRIRLSTL 463 (782)
Q Consensus 437 d~~~~~~~----------~~~~~d~~lG~~~i~l~~l 463 (782)
+....+.. ...+++..||.+.++|-+-
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 294 CGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EEEC--------------------CEEEEEEEESBCT
T ss_pred ecccCccccccccccccccccccceeEEEEeeeeecC
Confidence 85432100 0112456899999999884
No 111
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=38.37 E-value=24 Score=23.70 Aligned_cols=19 Identities=21% Similarity=0.370 Sum_probs=16.9
Q ss_pred hHHHHHHHHhhHHHHHhhh
Q 045512 696 QLQTVVGDLASQCERVQAI 714 (782)
Q Consensus 696 ~vQ~~~~~~a~~~e~~~~l 714 (782)
++|++-+.+|++++|++.+
T Consensus 7 ~mq~LNdrlAsyidkVR~L 25 (39)
T 1gk7_A 7 ELQELNDRFANYIDKVRFL 25 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3899999999999999876
No 112
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=33.01 E-value=99 Score=25.00 Aligned_cols=38 Identities=13% Similarity=0.372 Sum_probs=26.0
Q ss_pred HHHHHHHhHhhHHHHHHHHhhHHHHHhhhhcccCchhH
Q 045512 686 RYERLRSVGGQLQTVVGDLASQCERVQAILCWRDLRAT 723 (782)
Q Consensus 686 ~~~~l~~~~~~vQ~~~~~~a~~~e~~~~l~~w~~p~~s 723 (782)
+++.|.+-+..+++.-..+.....+++.-+-|++-+..
T Consensus 34 kL~~L~~kt~~L~~~s~~F~~~A~~l~rkmwwkn~K~~ 71 (91)
T 3hd7_A 34 KLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMM 71 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555666666666666677777778888888886554
Done!