BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045520
(305 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296081372|emb|CBI16805.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/309 (45%), Positives = 192/309 (62%), Gaps = 30/309 (9%)
Query: 1 MEWNGITSKKKGQKWGRDKAAFSKKSIYENFD-QFSEMPSFEKEISIGKDMEFEKLPPYI 59
+WNG TSKKKGQKWG++K + +++ Y++F+ Q SE + E+ M+F+KLP
Sbjct: 370 FQWNGTTSKKKGQKWGKEKMS-CRRNDYKDFNQQHSETFAVEEGTPPKDPMDFDKLPSLT 428
Query: 60 SLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDE 119
S PKEGD+IAYRLIEL+S+WTPE S+FRVGKIS YD ++NK++L VPE P+ E + DE
Sbjct: 429 SSPKEGDMIAYRLIELSSTWTPELSTFRVGKISSYDPESNKLILISVPESPIVAETRIDE 488
Query: 120 NVSALQSE---TLYGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGD 176
+ SAL+ + +LY EDGSL IDFS L+DVRIIK G HL +
Sbjct: 489 DASALEPDPDTSLYREDGSLEIDFSSLIDVRIIKSGNS------------------HL-E 529
Query: 177 QDVVMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSP 236
+ V V +D V ++ + K+ G GE+ + Q +V+ V N N+E +
Sbjct: 530 KAVTARVEAPVDTQDAVSGVKPNNKNSGMSTSLPG-GELNI-TQVSVAGVEHNINREMT- 586
Query: 237 AHTQENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTM 296
A ENGK+NAW+EI+ LSAKKA+LS D S KE +S SYKALR SALGPTM
Sbjct: 587 APPPENGKVNAWDEIDKVLSAKKAQLSQEDGSSKKESPGRSP---WSYKALRGSALGPTM 643
Query: 297 AFLRSENGL 305
+FLR++N
Sbjct: 644 SFLRAQNNF 652
>gi|359473153|ref|XP_002282307.2| PREDICTED: uncharacterized protein LOC100256103 [Vitis vinifera]
Length = 757
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/309 (45%), Positives = 192/309 (62%), Gaps = 30/309 (9%)
Query: 1 MEWNGITSKKKGQKWGRDKAAFSKKSIYENFD-QFSEMPSFEKEISIGKDMEFEKLPPYI 59
+WNG TSKKKGQKWG++K + +++ Y++F+ Q SE + E+ M+F+KLP
Sbjct: 475 FQWNGTTSKKKGQKWGKEKMS-CRRNDYKDFNQQHSETFAVEEGTPPKDPMDFDKLPSLT 533
Query: 60 SLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDE 119
S PKEGD+IAYRLIEL+S+WTPE S+FRVGKIS YD ++NK++L VPE P+ E + DE
Sbjct: 534 SSPKEGDMIAYRLIELSSTWTPELSTFRVGKISSYDPESNKLILISVPESPIVAETRIDE 593
Query: 120 NVSALQSE---TLYGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGD 176
+ SAL+ + +LY EDGSL IDFS L+DVRIIK G HL +
Sbjct: 594 DASALEPDPDTSLYREDGSLEIDFSSLIDVRIIKSGNS------------------HL-E 634
Query: 177 QDVVMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSP 236
+ V V +D V ++ + K+ G GE+ + Q +V+ V N N+E +
Sbjct: 635 KAVTARVEAPVDTQDAVSGVKPNNKNSGMSTSLPG-GELNI-TQVSVAGVEHNINREMT- 691
Query: 237 AHTQENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTM 296
A ENGK+NAW+EI+ LSAKKA+LS D S KE +S SYKALR SALGPTM
Sbjct: 692 APPPENGKVNAWDEIDKVLSAKKAQLSQEDGSSKKESPGRSP---WSYKALRGSALGPTM 748
Query: 297 AFLRSENGL 305
+FLR++N
Sbjct: 749 SFLRAQNNF 757
>gi|356569223|ref|XP_003552804.1| PREDICTED: uncharacterized protein LOC100806262 [Glycine max]
Length = 543
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/307 (44%), Positives = 182/307 (59%), Gaps = 36/307 (11%)
Query: 1 MEWNGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEKLPPYIS 60
+WNGIT+KKKGQKWG+++ F K+ YE+ Q ++ ++F+KL Y S
Sbjct: 271 FQWNGITNKKKGQKWGKERMPFRKQDGYEDSGQDCPTVQNAEKEQTSNVIDFDKLKHYTS 330
Query: 61 LPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDEN 120
LPKEGDVIAYRLIELT+SWTPE SSFRVGKIS YD+ +N+I L PV EYP F+KK DE+
Sbjct: 331 LPKEGDVIAYRLIELTASWTPELSSFRVGKISRYDAKSNRIWLEPVLEYPFDFKKKIDED 390
Query: 121 VSALQSE-TLYGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDV 179
S++Q + + Y EDGSL I+++LL DVR++KHG + + D
Sbjct: 391 ASSVQYDPSPYQEDGSLEIEYTLLADVRMVKHG-------------IPDLK------SDA 431
Query: 180 VMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHT 239
++N D + N + A A GE GDQ V + + E+
Sbjct: 432 LVNPTKATND---ITNEK-----LAAKAINGSTGEKLAGDQTTVGSC----HPERGHITA 479
Query: 240 QENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHR-LSYKALRSSALGPTMAF 298
+ENG++N W++IN AL AKKA+LS D S R +SS R S++A+R SALGPTMA
Sbjct: 480 KENGEVNVWDKINEALKAKKAKLSQEDCWS---RGGESSSTRSWSHRAMRCSALGPTMAL 536
Query: 299 LRSENGL 305
LRS NGL
Sbjct: 537 LRSNNGL 543
>gi|224110852|ref|XP_002315658.1| predicted protein [Populus trichocarpa]
gi|222864698|gb|EEF01829.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 171/313 (54%), Gaps = 63/313 (20%)
Query: 1 MEWNGITSKKKGQKWGRDKAAFSKKSIYENF--DQFSEMPSFEKEISIGKDMEFEKLPPY 58
+WNGITSKKKGQKWG++K K++ Y NF + +S + + E++ + FE+ P Y
Sbjct: 489 FQWNGITSKKKGQKWGKEKVVSCKRNDYNNFKKESYSSL-TIEEQTPVYDCTNFEEFPLY 547
Query: 59 ISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTD 118
SLPKEGDVIAYRL+EL+SSWTPE SS+RVGK+S YD ++N ++LA VPEYP+ EK D
Sbjct: 548 ASLPKEGDVIAYRLVELSSSWTPELSSYRVGKVSKYDLESNIVMLAQVPEYPVIPEKIDD 607
Query: 119 ENVSALQSETLYGEDGSLR----IDFSLLLDVRIIKHG--EKANEVHVGDQDFVTNFNEV 172
E AL + Y +DGSL I FS L +VR++ HG + A V G NEV
Sbjct: 608 EASDALPETSPYQDDGSLEVGVSIKFSALFEVRLVHHGNIKSAKSVTGGS-------NEV 660
Query: 173 HLGDQDVVMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNK 232
H+ DQD F ++ N
Sbjct: 661 HVRDQDSGTGFKLN--------------------------------------------NN 676
Query: 233 EKSPAHTQENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSAL 292
++ QENGK N WEE N AL+A+KA LS D E S +S SYKALR SAL
Sbjct: 677 HEAGTSAQENGKHNPWEETNQALTAQKAWLSQEDSCKKPESSGRSP---WSYKALRGSAL 733
Query: 293 GPTMAFLRSENGL 305
GPT+A LR++N L
Sbjct: 734 GPTVALLRAQNEL 746
>gi|224102415|ref|XP_002312668.1| predicted protein [Populus trichocarpa]
gi|222852488|gb|EEE90035.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 169/304 (55%), Gaps = 57/304 (18%)
Query: 3 WNGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSFEK-EISIGKDMEFEKLPPYISL 61
WNGITSKKKGQKWG++KA K++ Y NF + S + + + FE+LP Y SL
Sbjct: 228 WNGITSKKKGQKWGKEKAVSCKRNDYNNFRKESSSSLSIEEQTPVYDCTNFEELPLYASL 287
Query: 62 PKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENV 121
PKEGDVIAYR++EL+ SWTPE SS+RVGKIS YD ++N ++L VP YP+ EK DE
Sbjct: 288 PKEGDVIAYRVVELSLSWTPELSSYRVGKISKYDLESNIVILVQVPGYPVVPEKIDDEAS 347
Query: 122 SALQSETLYGEDGSLRIDFSLLLDVRIIKHG--EKANEVHVGDQDFVTNFNEVHLGDQDV 179
+AL + YGEDGSL I FS L +VR+++HG E A + V+ NEVH+ DQD
Sbjct: 348 AALPETSPYGEDGSLEIKFSTLHEVRLVRHGNLESAKSI-------VSGSNEVHVRDQD- 399
Query: 180 VMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHT 239
G +P N+N E + +
Sbjct: 400 ----------------------SGTGFSP--------------------NNNHEANTS-A 416
Query: 240 QENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTMAFL 299
QEN K N WEEIN AL+AKK LS D E S +S SYKALR S+LG TMA L
Sbjct: 417 QENEKRNPWEEINQALTAKKELLSQEDGWKKTESSSRSP---WSYKALRGSSLGRTMALL 473
Query: 300 RSEN 303
R++N
Sbjct: 474 RAQN 477
>gi|449435416|ref|XP_004135491.1| PREDICTED: uncharacterized protein LOC101214537 [Cucumis sativus]
Length = 612
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 169/310 (54%), Gaps = 60/310 (19%)
Query: 1 MEWNGITSKKKGQKWGRDKAAFSKK-----SIYENFDQFSEMPSFEKEISIGKDMEFEKL 55
+ WNGIT+KKKGQKWG++K K+ E SE + + + + F++L
Sbjct: 358 LHWNGITNKKKGQKWGKEKTPSWKRNNSNDCSSEPLQLLSETEQPKTPVPVVGSINFDEL 417
Query: 56 PPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEK 115
PY LP+EGD+IAYRLIEL+S+WTPE SSFR GK+SWYD+++N+I+L PVPEYPL +K
Sbjct: 418 RPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKK 477
Query: 116 KTDENVSALQSETLYGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLG 175
+ DE+ T YGEDGSL+IDF+ L+D+RII+ G + +Q+ +
Sbjct: 478 EIDEDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQGNLDSSRTAVNQEITSK------- 530
Query: 176 DQDVVMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKS 235
+ + HV + N R QGN
Sbjct: 531 ---QIAESSKHVHNNVDANNTR------------QGN----------------------- 552
Query: 236 PAHTQENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGPT 295
GK++AW+EI+ ALSAKK ELS + + ++ S + S SY+ALR SALGPT
Sbjct: 553 -------GKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKS---WSYRALRGSALGPT 602
Query: 296 MAFLRSENGL 305
MA LRS+ L
Sbjct: 603 MALLRSQKEL 612
>gi|356540235|ref|XP_003538595.1| PREDICTED: uncharacterized protein LOC100776892 [Glycine max]
Length = 352
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 191/310 (61%), Gaps = 40/310 (12%)
Query: 3 WNGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSF---EKEISIGKDMEFEKLPPY- 58
WNGIT+KKKGQKWG+++ +F K+ YE+ Q + P+ EKE ++F+KL PY
Sbjct: 76 WNGITNKKKGQKWGKERMSFRKQDGYEHSSQ--DCPTVRNAEKE-QPSNAIDFDKLKPYY 132
Query: 59 ISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTD 118
SLPKEGDVIAYRLIELT+SWTPE SSFRVGKIS YD+ +N+I L PV EYP F+KK D
Sbjct: 133 TSLPKEGDVIAYRLIELTASWTPELSSFRVGKISRYDAKSNRIWLEPVLEYPFDFKKKID 192
Query: 119 ENVSALQ-SETLYGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQ 177
E+ S++Q + + Y E+GSL I+++ L DVR++KH G+ D T
Sbjct: 193 EDASSVQYNPSPYQENGSLEIEYTSLADVRMVKH---------GNPDLKT---------- 233
Query: 178 DVVMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRL-GDQDAVSNVRDNSNKEKSP 236
VV++ + V ++ ++ KA G+ + +L DQ + + + E+
Sbjct: 234 -VVVSSDAWVKTTKATNDITKEKLAAKA---TNGSTDEKLAADQTTMGSCQ----PERGH 285
Query: 237 AHTQENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHR-LSYKALRSSALGPT 295
+ENG++N W+EIN AL AKKA+LS D S R +SS R S++A+R SALGPT
Sbjct: 286 ITAKENGEVNVWDEINEALKAKKAKLSKEDGWS---RGGESSSTRSWSHRAMRCSALGPT 342
Query: 296 MAFLRSENGL 305
MA LRS NGL
Sbjct: 343 MALLRSNNGL 352
>gi|255578367|ref|XP_002530050.1| conserved hypothetical protein [Ricinus communis]
gi|223530466|gb|EEF32350.1| conserved hypothetical protein [Ricinus communis]
Length = 607
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 173/305 (56%), Gaps = 56/305 (18%)
Query: 3 WNGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEKLPPYISLP 62
WNGITSKKKGQKWG++KA K++ + N Q + + ++FEKL Y +LP
Sbjct: 357 WNGITSKKKGQKWGKEKATSYKRNDHRNVSQECSEVRKDGGRPVYDRVDFEKLEFYTTLP 416
Query: 63 KEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVS 122
KEGDVIAYRLIEL+ SWTPE SS+RVGKIS YD +N++ L PVP YP+ K+T ++ S
Sbjct: 417 KEGDVIAYRLIELSPSWTPEISSYRVGKISRYDMQSNRVRLVPVPGYPVTH-KETGDDAS 475
Query: 123 ALQSETL-YGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDVVM 181
A SET+ Y +DGSL I+F+ L++VR++ G +N V + ++V + DQD
Sbjct: 476 AAPSETIPYAKDGSLWIEFASLIEVRLVTRG-NSNSV----KSVAGEIDKVPVRDQDNRT 530
Query: 182 NFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHTQE 241
+ G+ ++H AQ E
Sbjct: 531 GCRSNNGN--------------ESHVSAQ------------------------------E 546
Query: 242 NGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHR-LSYKALRSSALGPTMAFLR 300
NGK NAWEEI+ AL+AKKAEL+ D+ + SSG R SYKALR SALGPTMA LR
Sbjct: 547 NGKGNAWEEISEALNAKKAELAQEDNWN----KPGSSGRRPWSYKALRGSALGPTMALLR 602
Query: 301 SENGL 305
++N L
Sbjct: 603 AQNEL 607
>gi|357463229|ref|XP_003601896.1| hypothetical protein MTR_3g086550 [Medicago truncatula]
gi|355490944|gb|AES72147.1| hypothetical protein MTR_3g086550 [Medicago truncatula]
Length = 782
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 163/311 (52%), Gaps = 50/311 (16%)
Query: 1 MEWNGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEKLPPYIS 60
++WNG SK QKWG++K + K+ E Q + ++FEKL PY
Sbjct: 514 VQWNGTISK--DQKWGKEKTSAHKQDDCEQSSQDRPTDQNAGKKRTFDAVDFEKLTPYTD 571
Query: 61 LPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKK---T 117
LPKEG+VIAYRLIEL+ SWTPE SSFRVGK + YDS +N+I L PV E+P F KK
Sbjct: 572 LPKEGNVIAYRLIELSESWTPELSSFRVGKTTQYDSKSNRIWLQPVSEFPFDFWKKIDDM 631
Query: 118 DENVSALQSE-TLYGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGD 176
DE+ S QS+ + Y EDGSL ID++ L DVRIIKHG D T
Sbjct: 632 DEDGSPSQSDPSPYQEDGSLEIDYASLADVRIIKHGH---------SDLAT--------- 673
Query: 177 QDVVMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSP 236
VV + + V N D++ PA + E G S+K +
Sbjct: 674 --VVAHSDAFVTPTKATNNSTDEK-------PA--DNETAAG-----------SSKPQIE 711
Query: 237 AH--TQENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGP 294
H +ENG++N W+EIN AL AKK LS D K+ S S +ALR SALGP
Sbjct: 712 GHVTAKENGEVNVWDEINEALKAKKTRLSQED--RWKKEGDSSENRSWSQRALRCSALGP 769
Query: 295 TMAFLRSENGL 305
TMA LRS+NG
Sbjct: 770 TMALLRSQNGF 780
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 1 MEWNGITSKKKGQKWGRDKAAFSKKSIYENFDQ 33
+WNG TSKKKGQKWG+++ + K+ YE Q
Sbjct: 370 FQWNGTTSKKKGQKWGKERTSSHKQDDYEPSSQ 402
>gi|4850386|gb|AAD31056.1|AC007357_5 F3F19.5 [Arabidopsis thaliana]
Length = 547
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 161/305 (52%), Gaps = 60/305 (19%)
Query: 3 WNGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEKLPPYISLP 62
WNG +KKKGQKWG +K+ FSK+ ++F++ + E E +++E+L Y
Sbjct: 301 WNGNMTKKKGQKWGTEKSGFSKR-YAQDFNEDATTQPAEAETLANCPIDYEQLVAYTGSV 359
Query: 63 KEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVS 122
K+GDVIAYRLIELTSSWTPE SSFRVGKIS+YD D+ + L PV E+P+ EKKT+E+
Sbjct: 360 KKGDVIAYRLIELTSSWTPEVSSFRVGKISYYDPDSKMVTLMPVQEFPI--EKKTEEDDD 417
Query: 123 -ALQSET-LYGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDVV 180
+Q +T LY EDGSL I+FS LLDVR +K ++ V + E +
Sbjct: 418 FCMQPDTSLYKEDGSLEIEFSALLDVRSVKTS-SSDSAEVAK----SALPEPDQSAKKPK 472
Query: 181 MNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHTQ 240
++ N + PA+ NGEV SP
Sbjct: 473 LSANKEL------------------QTPAKENGEV-------------------SP---- 491
Query: 241 ENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTMAFLR 300
WEE++ ALSAKKA LS ++ K+ S SYKALR SA+GP M +LR
Sbjct: 492 -------WEELSEALSAKKAALSQANNGWNKKGSSSGGSW--SYKALRGSAMGPVMNYLR 542
Query: 301 SENGL 305
S+ +
Sbjct: 543 SQKEI 547
>gi|22329527|ref|NP_172762.2| coilin [Arabidopsis thaliana]
gi|20260258|gb|AAM13027.1| unknown protein [Arabidopsis thaliana]
gi|22136510|gb|AAM91333.1| unknown protein [Arabidopsis thaliana]
gi|332190840|gb|AEE28961.1| coilin [Arabidopsis thaliana]
Length = 608
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 161/305 (52%), Gaps = 60/305 (19%)
Query: 3 WNGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEKLPPYISLP 62
WNG +KKKGQKWG +K+ FSK+ ++F++ + E E +++E+L Y
Sbjct: 362 WNGNMTKKKGQKWGTEKSGFSKR-YAQDFNEDATTQPAEAETLANCPIDYEQLVAYTGSV 420
Query: 63 KEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVS 122
K+GDVIAYRLIELTSSWTPE SSFRVGKIS+YD D+ + L PV E+P+ EKKT+E+
Sbjct: 421 KKGDVIAYRLIELTSSWTPEVSSFRVGKISYYDPDSKMVTLMPVQEFPI--EKKTEEDDD 478
Query: 123 -ALQSET-LYGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDVV 180
+Q +T LY EDGSL I+FS LLDVR +K ++ V + E +
Sbjct: 479 FCMQPDTSLYKEDGSLEIEFSALLDVRSVKTS-SSDSAEVAK----SALPEPDQSAKKPK 533
Query: 181 MNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHTQ 240
++ N + PA+ NGEV SP
Sbjct: 534 LSANKEL------------------QTPAKENGEV-------------------SP---- 552
Query: 241 ENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTMAFLR 300
WEE++ ALSAKKA LS ++ K+ S SYKALR SA+GP M +LR
Sbjct: 553 -------WEELSEALSAKKAALSQANNGWNKKGSSSGGSW--SYKALRGSAMGPVMNYLR 603
Query: 301 SENGL 305
S+ +
Sbjct: 604 SQKEI 608
>gi|449533999|ref|XP_004173957.1| PREDICTED: uncharacterized LOC101214537, partial [Cucumis sativus]
Length = 187
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 133/242 (54%), Gaps = 55/242 (22%)
Query: 64 EGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVSA 123
EGD+IAYRLIEL+S+WTPE SSFR GK+SWYD+++N+I+L PVPEYPL +K+ DE+
Sbjct: 1 EGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSEL 60
Query: 124 LQSETLYGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDVVMNF 183
T YGEDGSL+IDF+ L+D+RII+ G + +Q+ + +
Sbjct: 61 QPDTTPYGEDGSLKIDFASLVDLRIIRQGNLDSSRTAVNQEITSK----------QIAES 110
Query: 184 NVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHTQENG 243
+ HV + N R QGN G
Sbjct: 111 SKHVHNNVDANNTR------------QGN------------------------------G 128
Query: 244 KLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTMAFLRSEN 303
K++AW+EI+ ALSAKK ELS + + ++ S + S SY+ALR SALGPTMA LRS+
Sbjct: 129 KVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKS---WSYRALRGSALGPTMALLRSQK 185
Query: 304 GL 305
L
Sbjct: 186 EL 187
>gi|297849688|ref|XP_002892725.1| hypothetical protein ARALYDRAFT_471456 [Arabidopsis lyrata subsp.
lyrata]
gi|297338567|gb|EFH68984.1| hypothetical protein ARALYDRAFT_471456 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 99/149 (66%), Gaps = 1/149 (0%)
Query: 3 WNGITSKKKGQKWGRDKAAFSKKSIYE-NFDQFSEMPSFEKEISIGKDMEFEKLPPYISL 61
WNG +KKKGQKWG +K+ FSK+ + N D + E E +++E+L Y
Sbjct: 356 WNGNMTKKKGQKWGTEKSGFSKRYAQDFNEDTTYQTQPTEAETPAKGPIDYEQLVAYTGS 415
Query: 62 PKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENV 121
K+GDVIAYRLIELTSSWTPE SSFRVGKIS+YD D+ K+ L PV E+P+ + + D++
Sbjct: 416 VKKGDVIAYRLIELTSSWTPEVSSFRVGKISYYDPDSKKVTLMPVQEFPIEKKTEEDDDF 475
Query: 122 SALQSETLYGEDGSLRIDFSLLLDVRIIK 150
S LY EDGSL I+FS LLDVR +K
Sbjct: 476 SMEPDTALYKEDGSLEIEFSALLDVRSVK 504
>gi|147742763|gb|ABQ50545.1| hypothetical protein [Brassica rapa]
Length = 504
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 139/293 (47%), Gaps = 86/293 (29%)
Query: 3 WNGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEKLPPYISLP 62
WNG +KKKGQKWG +K FSK+ ++ D + + E E +++E+L Y
Sbjct: 237 WNGNMTKKKGQKWGTEKTGFSKRYAWDLNDTYHQTQPAEAETLANGQIDYEQLVAYTGSV 296
Query: 63 KEGDVIAYRLIELTSSWTPEPSSFRV--------------------------GKISWYDS 96
K+GD+IAYRLIELTSSWTPE SSFRV GKIS+YD
Sbjct: 297 KKGDIIAYRLIELTSSWTPEVSSFRVKFLTLLFEPVDQSKYLSRLRYVHLLVGKISYYDP 356
Query: 97 DTNKILLAPVPEYPLAFEKKTDENV-SALQSET-LYGEDGSLRIDFSLLLDVRIIKHGEK 154
+ + L PV YP+ EKK +E+ S++Q++T LY EDGSL ++FS LLDVR
Sbjct: 357 VSKMVTLMPVQGYPI--EKKIEEDDDSSMQADTSLYNEDGSLEVEFSSLLDVR------- 407
Query: 155 ANEVHVGDQDFVTNFNEVHLGDQDVVMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGE 214
+V DVV E
Sbjct: 408 -----------------------------SVKTSSSDVV--------------------E 418
Query: 215 VRLGDQDAVSNVRDNSNKEKSPAHTQENGKLNAWEEINLALSAKKAELSHVDD 267
V A +N++ ++N +ENGK N WEE++ A+SAKKA+LS ++
Sbjct: 419 VATKPDQAATNLKLSTNSNGLQTTVKENGKGNPWEELSEAVSAKKAKLSEANN 471
>gi|222616930|gb|EEE53062.1| hypothetical protein OsJ_35798 [Oryza sativa Japonica Group]
Length = 697
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 152/342 (44%), Gaps = 80/342 (23%)
Query: 1 MEWNGITSKKKGQKWGRDKA------------------------AFSKKSIYENFD---- 32
+W+G TSKKKGQKWG D + A + K+ +F
Sbjct: 384 FQWSGTTSKKKGQKWGMDNSNKKSSDISYHGRITGTDTEVNHHVAGNSKTSDNDFGLASN 443
Query: 33 ----------QFSEMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPE 82
SE EK S + ++F+ L P LPKEGD+I YRL+EL+SSW PE
Sbjct: 444 QKVGESSHVGSASEKIVAEKGKSSSEPLDFDSLYPLTRLPKEGDLIVYRLVELSSSWCPE 503
Query: 83 PSSFRVGKISWYDSDTNKILLAPVPEYPL-AFEKKTDENVSALQSETLYGEDGSLRIDFS 141
SS+RVGK+ YD + +I+L PVPEYP A EK ++ L + Y EDGSL I++S
Sbjct: 504 LSSYRVGKVLIYDPISLRIILLPVPEYPFTAGEKNGEDESEMLVDMSPYKEDGSLEIEYS 563
Query: 142 LLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDVVMNFNVHVGDRDVVMNLRDDRK 201
LLD+R++K D D V Q V G +
Sbjct: 564 SLLDIRLLK-----------DTDSV----------QPAVSTPLTETGIK----------- 591
Query: 202 HGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHTQENGKLNAWEEINLALSAKKAE 261
G +HA N L + + N K P TQE + WEE + + A
Sbjct: 592 -GGSHAQKPAN----LDNHKGKIHSEKLPNNTKDPEATQEKTQNTVWEENGEVANDEPA- 645
Query: 262 LSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTMAFLRSEN 303
V + + +S SY+ALRSSALGPT+A LR +N
Sbjct: 646 ---VQENGWGTWTPNASTSAWSYRALRSSALGPTLAHLRGKN 684
>gi|115488214|ref|NP_001066594.1| Os12g0288600 [Oryza sativa Japonica Group]
gi|108862499|gb|ABA97134.2| expressed protein [Oryza sativa Japonica Group]
gi|113649101|dbj|BAF29613.1| Os12g0288600 [Oryza sativa Japonica Group]
Length = 561
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 152/342 (44%), Gaps = 80/342 (23%)
Query: 1 MEWNGITSKKKGQKWGRDKA------------------------AFSKKSIYENFD---- 32
+W+G TSKKKGQKWG D + A + K+ +F
Sbjct: 248 FQWSGTTSKKKGQKWGMDNSNKKSSDISYHGRITGTDTEVNHHVAGNSKTSDNDFGLASN 307
Query: 33 ----------QFSEMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPE 82
SE EK S + ++F+ L P LPKEGD+I YRL+EL+SSW PE
Sbjct: 308 QKVGESSHVGSASEKIVAEKGKSSSEPLDFDSLYPLTRLPKEGDLIVYRLVELSSSWCPE 367
Query: 83 PSSFRVGKISWYDSDTNKILLAPVPEYPL-AFEKKTDENVSALQSETLYGEDGSLRIDFS 141
SS+RVGK+ YD + +I+L PVPEYP A EK ++ L + Y EDGSL I++S
Sbjct: 368 LSSYRVGKVLIYDPISLRIILLPVPEYPFTAGEKNGEDESEMLVDMSPYKEDGSLEIEYS 427
Query: 142 LLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDVVMNFNVHVGDRDVVMNLRDDRK 201
LLD+R++K D D V Q V G +
Sbjct: 428 SLLDIRLLK-----------DTDSV----------QPAVSTPLTETGIK----------- 455
Query: 202 HGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHTQENGKLNAWEEINLALSAKKAE 261
G +HA N L + + N K P TQE + WEE + + A
Sbjct: 456 -GGSHAQKPAN----LDNHKGKIHSEKLPNNTKDPEATQEKTQNTVWEENGEVANDEPA- 509
Query: 262 LSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTMAFLRSEN 303
V + + +S SY+ALRSSALGPT+A LR +N
Sbjct: 510 ---VQENGWGTWTPNASTSAWSYRALRSSALGPTLAHLRGKN 548
>gi|242075592|ref|XP_002447732.1| hypothetical protein SORBIDRAFT_06g014760 [Sorghum bicolor]
gi|241938915|gb|EES12060.1| hypothetical protein SORBIDRAFT_06g014760 [Sorghum bicolor]
Length = 478
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 158/345 (45%), Gaps = 70/345 (20%)
Query: 1 MEWNGITSKKKGQKWG-----------------------------------RDKAAFSKK 25
+W+ SKKKGQKWG D A S +
Sbjct: 149 FQWSATMSKKKGQKWGMNSSNKKSADIGYHAGIAGSDTEVNNHVMDIKVTKNDFCAVSNR 208
Query: 26 SIYE--NFDQFSEMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEP 83
E N + S +E S G+ +FE L P LPKEGD+IAYRL+EL+S PE
Sbjct: 209 RNNEGSNIEMSSVKSVANEEKSSGEPFDFESLYPLTRLPKEGDLIAYRLVELSSMLCPEL 268
Query: 84 SSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVSALQSE-TLYGEDGSLRIDFSL 142
SS+RVGK+ YD +++I+L PV +YP+ E+K +++ S + ++ + Y EDGSL I++S
Sbjct: 269 SSYRVGKVLIYDPVSSRIILLPVQKYPITIEEKENKDESDMLADLSPYKEDGSLEIEYSS 328
Query: 143 LLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDVVMNFNVHVGDRDVVMNLRDDRKH 202
LLDVR++K E +H ++V ++ V + + +
Sbjct: 329 LLDVRLLKGAEPVLGAASTPSALAGRPVTLHKNKGNIVSQKSLLVANSTKDEERKLEGNI 388
Query: 203 GKAHAPAQGNG----EVRLGDQDAVSNVRDNSNKEKSPAHTQENGKLNAWEEINLALSAK 258
G+ +P N E +LG + S V + +++ QENG W++ N + SA
Sbjct: 389 GRQKSPLVANNTKDEERKLGKSE--STVWEKNDEPSDKVDVQENG-WGTWKQ-NASTSA- 443
Query: 259 KAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTMAFLRSEN 303
SY+ALRSSALGPTMA LR +N
Sbjct: 444 -----------------------WSYRALRSSALGPTMAMLRGKN 465
>gi|357154770|ref|XP_003576896.1| PREDICTED: uncharacterized protein LOC100832685 [Brachypodium
distachyon]
Length = 656
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 148/338 (43%), Gaps = 86/338 (25%)
Query: 3 WNGITSKKKGQKWGRDK-----------------------------------AAFSKKSI 27
W+G SKKKGQKWG + S + +
Sbjct: 347 WSGTMSKKKGQKWGMNNSNKKSADIGHVGKVAGTNTEVNHLVLDSKNEENGFCGVSNQIV 406
Query: 28 YENFDQF-SEMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSF 86
+ D E E+ SI + M+F+ L P LPKEGD+I YRL+EL+SSW PE SS+
Sbjct: 407 ESSHDVLLREKTHAEEGKSISESMDFDSLYPLTRLPKEGDLIVYRLVELSSSWCPEISSY 466
Query: 87 RVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVSALQSE-TLYGEDGSLRIDFSLLLD 145
RVGK+ YD + +I+L PVPEYP+ E+ E+ S + + + Y EDGSL I++S LLD
Sbjct: 467 RVGKVLIYDLISMRIILLPVPEYPIIKEETAGEDESDMPVDMSPYSEDGSLEIEYSSLLD 526
Query: 146 VRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDVVMNFN---VHVGDRDVVMNLRDDRKH 202
VR++K G ++ V T L Q V ++ N +H +V N D +
Sbjct: 527 VRLLK-GSESVSTAVSTPIRETGKKGESLVKQPVTLDKNKGVIHSQTEPLVPNNTKDPEA 585
Query: 203 GKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHTQENGKLNAWEEINLALSAKKAEL 262
K +++ ++ D P QENG W+
Sbjct: 586 NKIW-------------DESIESLSDK------PDEVQENG-WGTWK------------- 612
Query: 263 SHVDDQSAKERSKQSSGHRLSYKALRSSALGPTMAFLR 300
SS SY+A RS+ALGPT+A LR
Sbjct: 613 ------------PNSSTSAWSYRAQRSTALGPTLALLR 638
>gi|449450614|ref|XP_004143057.1| PREDICTED: uncharacterized protein LOC101208799 [Cucumis sativus]
Length = 550
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 40/265 (15%)
Query: 4 NGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSFEKEIS-IGKDMEFEKLPPYISLP 62
NG+ K + R ++++ S +N + S P +K +S + ++F+KL P SLP
Sbjct: 304 NGMAVKNVRNRGQRKSSSWT--SNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLP 361
Query: 63 KEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVS 122
+ GD+IAYRLIEL+S+WTPE SSFRVGK+ W + NKI++ PVPEYP ++ +
Sbjct: 362 ERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYK-------A 414
Query: 123 ALQSETL---YGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDV 179
A+ E++ Y EDGSL+ D+S L+D++I++H VG + N E G +
Sbjct: 415 AMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNS-----VGFEATAGNIREAS-GTKQS 468
Query: 180 VMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHT 239
+ H N K G+ H + D+ +V
Sbjct: 469 WNKWENHSTAPKQSWN-----KLGENHPKPPKQSWKKWEDRTSV---------------- 507
Query: 240 QENGKLNAWEEINLALSAKKAELSH 264
+ NGK N W+EI A AKKA+L +
Sbjct: 508 RGNGKENGWDEILQAFGAKKAKLCN 532
>gi|449530887|ref|XP_004172423.1| PREDICTED: uncharacterized LOC101208799 [Cucumis sativus]
Length = 553
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 40/265 (15%)
Query: 4 NGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSFEKEIS-IGKDMEFEKLPPYISLP 62
NG+ K + R ++++ S +N + S P +K +S + ++F+KL P SLP
Sbjct: 307 NGMAVKNVRNRGQRKSSSWT--SNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLP 364
Query: 63 KEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVS 122
+ GD+IAYRLIEL+S+WTPE SSFRVGK+ W + NKI++ PVPEYP ++ +
Sbjct: 365 ERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYK-------A 417
Query: 123 ALQSETL---YGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDV 179
A+ E++ Y EDGSL+ D+S L+D++I++H VG + N E G +
Sbjct: 418 AMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNS-----VGFEATAGNIREAS-GTKQS 471
Query: 180 VMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHT 239
+ H N K G+ H + D+ +V
Sbjct: 472 WNKWENHSTAPKQSWN-----KLGENHPKPPKQSWKKWEDRTSV---------------- 510
Query: 240 QENGKLNAWEEINLALSAKKAELSH 264
+ NGK N W+EI A AKKA+L +
Sbjct: 511 RGNGKENGWDEILQAFGAKKAKLCN 535
>gi|294462228|gb|ADE76665.1| unknown [Picea sitchensis]
Length = 281
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 143/286 (50%), Gaps = 53/286 (18%)
Query: 63 KEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVS 122
+EGD+IAYRL+EL++SW PE SSFRVG ++ YD + KI L PV EYP F E
Sbjct: 6 QEGDIIAYRLVELSTSWRPELSSFRVGTVASYDCQSTKIRLVPVSEYPFVFRNSHGEEED 65
Query: 123 ALQSE-TLYGEDGSLRIDFSLLLDVRII-KHGEKANEVHV-GDQDFVTNFNE--VHLGDQ 177
A Q+ +LY +DGSL IDF L+DVR + +H + +H G++ N V + D+
Sbjct: 66 ADQTGISLYNDDGSLDIDFLSLVDVRWVHQHKPSSEPIHTDGEKQISINDTSTGVPIADE 125
Query: 178 DVVMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQG-NGEVRLGDQDAVSNVRDNSNKEKSP 236
+ + + G R+++ + + A G +G V + + +N+ P
Sbjct: 126 PGTLATDAN-GQRNLMSSADKNTDFPIIEKLATGTHGNVEINSKSDTANL---------P 175
Query: 237 AHTQENGKL-NAWEEINLALSAKKAELSHVDDQ-----------------------SAKE 272
A T+ +G++ + W+EIN SAKKAEL+ +DQ +
Sbjct: 176 ALTEGDGEIASVWKEINQVFSAKKAELALKNDQPKVVDMEAEITKTLKRSRSKGLKDISQ 235
Query: 273 RSKQSSGHR-------------LSYKALRSSALGPTMAFLRSENGL 305
SKQ +G S++A R+ ALGPT++ LR++N L
Sbjct: 236 LSKQGTGEMPKQGKQGSGSTNPRSFRASRNCALGPTISLLRAQNTL 281
>gi|218186688|gb|EEC69115.1| hypothetical protein OsI_38029 [Oryza sativa Indica Group]
Length = 836
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 102/189 (53%), Gaps = 39/189 (20%)
Query: 1 MEWNGITSKKKGQKWGRDK-------------------------AAFSKKS-------IY 28
+W+G TSKKKGQKWG D A SK S
Sbjct: 504 FQWSGTTSKKKGQKWGMDNSNKKSSDISYHGRITGTDTEVNHHVAGNSKTSDNDFGLASN 563
Query: 29 ENFDQFSEMPSFEKEI------SIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPE 82
+ + S + S ++I S + ++F+ L P LPKEGD+I YRL+EL+SSW PE
Sbjct: 564 QKVGESSHVGSASEKIFALKGKSSSEPLDFDSLYPLTRLPKEGDLIVYRLVELSSSWCPE 623
Query: 83 PSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVS-ALQSETLYGEDGSLRIDFS 141
SS+RVGK+ YD + +I+L PVPEYP A +K E+ S L + Y EDGSL I++S
Sbjct: 624 LSSYRVGKVLIYDPISLRIILLPVPEYPFAAGEKNGEDESEMLVDMSPYKEDGSLEIEYS 683
Query: 142 LLLDVRIIK 150
LLD+R++K
Sbjct: 684 SLLDIRLLK 692
>gi|414587468|tpg|DAA38039.1| TPA: hypothetical protein ZEAMMB73_664013 [Zea mays]
Length = 614
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 96/188 (51%), Gaps = 38/188 (20%)
Query: 1 MEWNGITSKKKGQKWGRDK-----------------------------------AAFSKK 25
+W+G SKKKGQKWG + A S +
Sbjct: 299 FQWSGTLSKKKGQKWGINSSNKKNADVGYHAGIAGSNTEVNNLVMDIKVTENGFCAVSNR 358
Query: 26 SIYE--NFDQFSEMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEP 83
I E N + S +E S G +FE L P LPKEGD+IAYRL+EL+S PE
Sbjct: 359 RIDEGSNVEMSSVKAVANEEKSRGVPFDFESLYPLTQLPKEGDLIAYRLVELSSMLCPEL 418
Query: 84 SSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDEN-VSALQSETLYGEDGSLRIDFSL 142
SSFRVGK+ YD + +I+L PV EYP+ E+ D++ L + Y EDGSL I++S
Sbjct: 419 SSFRVGKVVLYDPISLRIILLPVQEYPITTEENEDKDEPDMLVDLSPYKEDGSLEIEYSS 478
Query: 143 LLDVRIIK 150
LLDVR++K
Sbjct: 479 LLDVRLLK 486
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 275 KQSSGHRLSYKALRSSALGPTMAFLRSEN 303
KQ+S SY+ALRSSALGPTMA LR +N
Sbjct: 573 KQNSTSAWSYRALRSSALGPTMALLRGKN 601
>gi|414587469|tpg|DAA38040.1| TPA: hypothetical protein ZEAMMB73_664013 [Zea mays]
Length = 608
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 96/188 (51%), Gaps = 38/188 (20%)
Query: 1 MEWNGITSKKKGQKWGRDK-----------------------------------AAFSKK 25
+W+G SKKKGQKWG + A S +
Sbjct: 299 FQWSGTLSKKKGQKWGINSSNKKNADVGYHAGIAGSNTEVNNLVMDIKVTENGFCAVSNR 358
Query: 26 SIYE--NFDQFSEMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEP 83
I E N + S +E S G +FE L P LPKEGD+IAYRL+EL+S PE
Sbjct: 359 RIDEGSNVEMSSVKAVANEEKSRGVPFDFESLYPLTQLPKEGDLIAYRLVELSSMLCPEL 418
Query: 84 SSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDEN-VSALQSETLYGEDGSLRIDFSL 142
SSFRVGK+ YD + +I+L PV EYP+ E+ D++ L + Y EDGSL I++S
Sbjct: 419 SSFRVGKVVLYDPISLRIILLPVQEYPITTEENEDKDEPDMLVDLSPYKEDGSLEIEYSS 478
Query: 143 LLDVRIIK 150
LLDVR++K
Sbjct: 479 LLDVRLLK 486
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 275 KQSSGHRLSYKALRSSALGPTMAFLRSEN 303
KQ+S SY+ALRSSALGPTMA LR +N
Sbjct: 567 KQNSTSAWSYRALRSSALGPTMALLRGKN 595
>gi|226529607|ref|NP_001146467.1| uncharacterized protein LOC100280055 [Zea mays]
gi|219887405|gb|ACL54077.1| unknown [Zea mays]
Length = 608
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 96/188 (51%), Gaps = 38/188 (20%)
Query: 1 MEWNGITSKKKGQKWGRDK-----------------------------------AAFSKK 25
+W+G SKKKGQKWG + A S +
Sbjct: 299 FQWSGTLSKKKGQKWGINSSNKKNADVGYHAGIAGSNTEVNNLVMDIKVTENGFCAVSNR 358
Query: 26 SIYE--NFDQFSEMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEP 83
I E N + S +E S G +FE L P LPKEGD+IAYRL+EL+S P+
Sbjct: 359 RIDEGSNVEMSSVKAVANEEKSRGVPFDFESLYPLTQLPKEGDLIAYRLVELSSMLCPDL 418
Query: 84 SSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDEN-VSALQSETLYGEDGSLRIDFSL 142
SSFRVGK+ YD + +I+L PV EYP+ E+ D++ L + Y EDGSL I++S
Sbjct: 419 SSFRVGKVVLYDPISLRIILLPVQEYPITTEENEDKDEPDMLVDLSPYKEDGSLEIEYSS 478
Query: 143 LLDVRIIK 150
LLDVR++K
Sbjct: 479 LLDVRLLK 486
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 275 KQSSGHRLSYKALRSSALGPTMAFLRSEN 303
KQ+S SY+ALRSSALGPTMA LR +N
Sbjct: 567 KQNSTSAWSYRALRSSALGPTMALLRGKN 595
>gi|168052384|ref|XP_001778630.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669948|gb|EDQ56525.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 827
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 162/350 (46%), Gaps = 61/350 (17%)
Query: 1 MEWNGITSKKKGQKWGRDKAAFSKKSI---YENFDQF------SEMPSFEKEISIGKDME 51
+ + + K++GQ WG++K+ SKKS Y N ++F M ++ + ++
Sbjct: 486 LSYPQVKCKQQGQAWGQEKSQ-SKKSEGGHYRNGEKFENRSSEGTMEQIDQANVVAHEIN 544
Query: 52 FEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPL 111
FE LP P+ GDV+AYRL+ELT+SWTPE SS+RVGK++ YD + L VPEYPL
Sbjct: 545 FENLPVLNRDPRIGDVLAYRLVELTASWTPELSSYRVGKVTVYDGASKMTTLIAVPEYPL 604
Query: 112 AFEKKTDENVSALQSETL---YGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVTN 168
+ + Q E L Y DGSL + + L+D++++K G ++ V Q
Sbjct: 605 HVRQSEGVEENEQQDEDLLPPYNPDGSLEVHLTTLVDLKVLKEGPVSSSSAV--QPKSAA 662
Query: 169 FNEVHLGDQDVVMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRD 228
+ +G DV ++ + ++ + +KH + A + L Q + +
Sbjct: 663 RKPLDVGTADVGVSTEPL---QPTTLSNKVLQKHAEPAA------HINLNKQSVALSSQS 713
Query: 229 NSNK--------EKSPAHTQENGKLNA-----WEE-INLALSAKKAELS----------- 263
N + E P T+ LN W++ ++ A++ K+ ELS
Sbjct: 714 NQGEFSAAGNVVEMRPLPTEPESVLNQPTNAEWQDMLSEAINRKRKELSLKELGGSEGLA 773
Query: 264 -----------HVDDQSAKERSKQSSGHR-LSYKALRSSALGPTMAFLRS 301
V +R Q++G + ++ +R+ ALGPTMA LR+
Sbjct: 774 PAGDVKSNLGNPVARGEGGKRQSQTNGTPIIRHRHMRTGALGPTMALLRA 823
>gi|413918196|gb|AFW58128.1| hypothetical protein ZEAMMB73_475112 [Zea mays]
gi|413918197|gb|AFW58129.1| hypothetical protein ZEAMMB73_475112 [Zea mays]
Length = 421
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 99/195 (50%), Gaps = 37/195 (18%)
Query: 1 MEWNGITSKKKGQKWGRDKA--------------------------------AFSKKSIY 28
+W+ SKKKGQKWG + + F +
Sbjct: 120 FQWSATMSKKKGQKWGMNSSNKKNADIGYHAGIAGCSTEVNNHVMDIKVTENGFCAVNNR 179
Query: 29 ENFD----QFSEMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPS 84
N + + S + + E + FE L P LPKEGD+IAYRL+EL+S PE S
Sbjct: 180 RNNEGSNIEMSSVQNIANEEKSSEPFNFESLYPLTRLPKEGDLIAYRLVELSSMLCPELS 239
Query: 85 SFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVS-ALQSETLYGEDGSLRIDFSLL 143
S+RVGK+ YD + +I+L PV EYP+ E+K +++ S L + Y EDGSL I++S L
Sbjct: 240 SYRVGKVLVYDPVSLRIILVPVQEYPITTEEKENKDESDMLVDLSPYKEDGSLEIEYSSL 299
Query: 144 LDVRIIKHGEKANEV 158
+DVR++K E NEV
Sbjct: 300 VDVRLLKGIETCNEV 314
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 283 SYKALRSSALGPTMAFLRSEN 303
SY+ALRSSALGPTMA LR +N
Sbjct: 389 SYRALRSSALGPTMAILRGKN 409
>gi|413918198|gb|AFW58130.1| hypothetical protein ZEAMMB73_475112 [Zea mays]
Length = 320
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 121/245 (49%), Gaps = 57/245 (23%)
Query: 63 KEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVS 122
+EGD+IAYRL+EL+S PE SS+RVGK+ YD + +I+L PV EYP+ E+K +++ S
Sbjct: 117 QEGDLIAYRLVELSSMLCPELSSYRVGKVLVYDPVSLRIILVPVQEYPITTEEKENKDES 176
Query: 123 -ALQSETLYGEDGSLRIDFSLLLDVRIIKHGEKANEV--HVGDQDFVTNFNEVHLGDQDV 179
L + Y EDGSL I++S L+DVR++K E NEV + + NE ++ Q
Sbjct: 177 DMLVDLSPYKEDGSLEIEYSSLVDVRLLKGIETCNEVGSAPAGRPVTLHKNEGNIESQKS 236
Query: 180 VMNFNVHVGDRDVVMNLRDDRKHGKAHAPA-QGNGEVRLGDQDAVSNVRDNSNKEKSPAH 238
+ N G ++R GK+ + + NGE D V +++ A
Sbjct: 237 PLVSNNTKG---------EERALGKSESTVWEKNGE----PSDKVDLLQNGW------AT 277
Query: 239 TQENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTMAF 298
++N +AW SY+ALRSSALGPTMA
Sbjct: 278 WKQNASTSAW----------------------------------SYRALRSSALGPTMAI 303
Query: 299 LRSEN 303
LR +N
Sbjct: 304 LRGKN 308
>gi|413918195|gb|AFW58127.1| hypothetical protein ZEAMMB73_475112 [Zea mays]
Length = 540
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 63 KEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVS 122
+EGD+IAYRL+EL+S PE SS+RVGK+ YD + +I+L PV EYP+ E+K +++ S
Sbjct: 337 QEGDLIAYRLVELSSMLCPELSSYRVGKVLVYDPVSLRIILVPVQEYPITTEEKENKDES 396
Query: 123 -ALQSETLYGEDGSLRIDFSLLLDVRIIKHGEKANEV 158
L + Y EDGSL I++S L+DVR++K E NEV
Sbjct: 397 DMLVDLSPYKEDGSLEIEYSSLVDVRLLKGIETCNEV 433
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 283 SYKALRSSALGPTMAFLRSEN 303
SY+ALRSSALGPTMA LR +N
Sbjct: 508 SYRALRSSALGPTMAILRGKN 528
>gi|293333205|ref|NP_001170284.1| uncharacterized protein LOC100384247 [Zea mays]
gi|224034795|gb|ACN36473.1| unknown [Zea mays]
Length = 469
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 63 KEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVS 122
+EGD+IAYRL+EL+S PE SS+RVGK+ YD + +I+L PV EYP+ E+K +++ S
Sbjct: 266 QEGDLIAYRLVELSSMLCPELSSYRVGKVLVYDPVSLRIILVPVQEYPITTEEKENKDES 325
Query: 123 -ALQSETLYGEDGSLRIDFSLLLDVRIIKHGEKANEV 158
L + Y EDGSL I++S L+DVR++K E NEV
Sbjct: 326 DMLVDLSPYKEDGSLEIEYSSLVDVRLLKGIETCNEV 362
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 283 SYKALRSSALGPTMAFLRSEN 303
SY+ALRSSALGPTMA LR +N
Sbjct: 437 SYRALRSSALGPTMAILRGKN 457
>gi|449529162|ref|XP_004171570.1| PREDICTED: uncharacterized LOC101214537 [Cucumis sativus]
Length = 124
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 1 MEWNGITSKKKGQKWGRDKAAFSKK-----SIYENFDQFSEMPSFEKEISIGKDMEFEKL 55
+ WNGIT+KKKGQKWG++K+ K+ E SE + + + + F++L
Sbjct: 41 LHWNGITNKKKGQKWGKEKSPSWKRNNSNDCSSEPLQLLSETEQPKTPVPVVGSIHFDEL 100
Query: 56 PPYISLPKEGDVI 68
PPY LP+ VI
Sbjct: 101 PPYTGLPQVEIVI 113
>gi|384245604|gb|EIE19097.1| hypothetical protein COCSUDRAFT_59584 [Coccomyxa subellipsoidea
C-169]
Length = 707
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 27/149 (18%)
Query: 36 EMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYD 95
+ PS + D EFE L P EGD+IAYRL+ +++ WTP+ S +R G++ D
Sbjct: 342 QAPSKPVDAGPKTDAEFEALQRVELYPIEGDIIAYRLLHISADWTPQVSEWRKGRVIDLD 401
Query: 96 SDTNKILLAPVPE---YPLAFEKKTDEN-------VSALQSETL---------------- 129
+ + P P+ +PL ++ + ALQ
Sbjct: 402 EQNKVLTVEPWPDSSVHPLTGPRQPSPTGHETWSELDALQPHESGGEAEEEEEEGEQPPS 461
Query: 130 -YGEDGSLRIDFSLLLDVRIIKHGEKANE 157
Y EDG L + D+R+I+ A E
Sbjct: 462 DYNEDGVLVTALTSFCDMRLIRGYSPAKE 490
>gi|307111012|gb|EFN59247.1| hypothetical protein CHLNCDRAFT_138244 [Chlorella variabilis]
Length = 102
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 52 FEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPE--- 108
F +LP P GDV+AYRL+E+ + P S R G++ D+ T ILL P P+
Sbjct: 6 FGQLPLLDRAPHVGDVLAYRLLEIGADLQPSVSEVRFGRVIGADTATKAILLQPHPDAAV 65
Query: 109 YPLAFEKKTDENVSALQSETL 129
+PL + + + ++E +
Sbjct: 66 HPLTYRRAKALALRQAEAEAI 86
>gi|291242047|ref|XP_002740920.1| PREDICTED: coilin-like [Saccoglossus kowalevskii]
Length = 558
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYD 95
++ L P P+ GD IAY+++EL+SS+ PE S F+ G ++ YD
Sbjct: 445 DYNSLTPLHGPPRTGDKIAYKILELSSSYNPEISEFKEGLVTLYD 489
>gi|390359840|ref|XP_003729573.1| PREDICTED: uncharacterized protein LOC100888408 [Strongylocentrotus
purpuratus]
Length = 671
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYP 110
++ PP + P+ GD+IAY+++EL+ +TPE S ++ G++ ++ +N ++ + +
Sbjct: 567 DYSSYPPLVGPPRSGDIIAYKILELSGLYTPEVSGYKEGEVINFN-HSNSMMELRLSDVA 625
Query: 111 LAFEKKTD 118
+A E K D
Sbjct: 626 MAAEPKRD 633
>gi|195999290|ref|XP_002109513.1| hypothetical protein TRIADDRAFT_53621 [Trichoplax adhaerens]
gi|190587637|gb|EDV27679.1| hypothetical protein TRIADDRAFT_53621 [Trichoplax adhaerens]
Length = 461
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 32/42 (76%)
Query: 62 PKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILL 103
P+ GD I +R++EL+SS+TPE S F+ G + Y++ T++I++
Sbjct: 367 PRSGDKIVFRVLELSSSYTPEISKFKEGVVESYNNATDQIII 408
>gi|410901731|ref|XP_003964349.1| PREDICTED: coilin-like [Takifugu rubripes]
Length = 498
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 17/106 (16%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILL-----AP 105
++ +P + P+ G IA++L+ELT ++TPE S ++ GK+ +D T +I L +
Sbjct: 394 DYGSMPLLAAPPQVGQRIAFKLLELTENYTPEVSDYKEGKMISFDHTTTQIELELQAVSQ 453
Query: 106 VPEYPLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRIIKH 151
VP P F+ DG+ R+++++ D R+++
Sbjct: 454 VPVEPGKFDL------------VYQNPDGTERVEYAVSRDARVVER 487
>gi|410980671|ref|XP_003996700.1| PREDICTED: coilin [Felis catus]
Length = 579
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 28 YENFDQFSEMPSFEKEI---SIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPS 84
Y+ Q +EM + I + ++ LP + P+ G+ IA++L+ELTS ++P+ S
Sbjct: 435 YQKHQQLNEMVTNSSTIIQNPVETHKDYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVS 494
Query: 85 SFRVGKISWYDSDTNKI 101
++ GKI ++ DT ++
Sbjct: 495 DYKEGKILSHNPDTQQV 511
>gi|395537314|ref|XP_003770648.1| PREDICTED: coilin [Sarcophilus harrisii]
Length = 567
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI---LLA--P 105
++ LP + P+ G+ IA++L+ELT+ ++P+ SS++ GKI Y+ D ++ +L+ P
Sbjct: 451 DYSLLPQLAAPPRVGEKIAFKLLELTADYSPDVSSYKEGKIINYNPDAQEVDIEILSSLP 510
Query: 106 VPEYPLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRII 149
V + P F+ E +D + I + L++ R+I
Sbjct: 511 VVKEPGKFDLVYQNENGTEVVEYAVSQDKRITICWKELIEPRLI 554
>gi|260801042|ref|XP_002595405.1| hypothetical protein BRAFLDRAFT_119021 [Branchiostoma floridae]
gi|229280651|gb|EEN51417.1| hypothetical protein BRAFLDRAFT_119021 [Branchiostoma floridae]
Length = 594
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 32/48 (66%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDT 98
+++ PP P+ GD IAY+++E+++++ PE SS++ ++ YD T
Sbjct: 491 DYDAFPPLHGPPRVGDRIAYKILEMSANYCPEISSYKEAVVTGYDPAT 538
>gi|403280055|ref|XP_003931554.1| PREDICTED: coilin [Saimiri boliviensis boliviensis]
Length = 506
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI---LLAPVP 107
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ GKI ++ +T ++ +L+ +P
Sbjct: 390 DYSLLPLLAAAPRVGEKIAFKLLELTSSYSPDVSDYKEGKILSHNPETQQVDIEILSSLP 449
>gi|351705016|gb|EHB07935.1| Coilin [Heterocephalus glaber]
Length = 222
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 40 FEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTN 99
+ + + KD + LP + PK G+ IA++L+ELTS ++P+ S ++ GK+ ++ +T
Sbjct: 39 IQNPVELPKD--YSLLPLLAAAPKVGEKIAFKLLELTSDYSPDFSDYKEGKLLSHNPETQ 96
Query: 100 KILLAPVPEYPLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRI 148
++ + +P P E + V + E+G+ + +++ + RI
Sbjct: 97 QVDIEILPSLPAVKEPGKCDLV-------YHSENGTEVVQYAVTQERRI 138
>gi|74226948|dbj|BAE27116.1| unnamed protein product [Mus musculus]
Length = 572
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI +D +T ++
Sbjct: 459 DYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHDPETQQV 509
>gi|6630996|gb|AAF19644.1|AF208663_1 coilin p80 [Mus musculus]
Length = 569
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI +D +T ++
Sbjct: 456 DYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHDPETQQV 506
>gi|134053929|ref|NP_057915.2| coilin [Mus musculus]
Length = 573
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI +D +T ++
Sbjct: 460 DYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHDPETQQV 510
>gi|81862452|sp|Q5SU73.1|COIL_MOUSE RecName: Full=Coilin; AltName: Full=p80
Length = 570
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI +D +T ++
Sbjct: 457 DYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHDPETQQV 507
>gi|194217160|ref|XP_001500433.2| PREDICTED: coilin [Equus caballus]
Length = 577
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 20 AAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEK-----LPPYISLPKEGDVIAYRLIE 74
++ + Y+ Q +EM + I I +E K LP + P+ G+ IA++L+E
Sbjct: 426 CVLNRNAEYQKQQQLNEMITNSSTI-IQNPVETHKKDYSLLPLLAAAPQVGEKIAFKLLE 484
Query: 75 LTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVSALQSETLYGEDG 134
LTS ++P+ S ++ GKI ++ +T ++ + + P E + V + E+G
Sbjct: 485 LTSDYSPDVSDYKEGKILSHNPETQQVDIEILSSLPAMKEPGKFDLV-------YHNENG 537
Query: 135 SLRIDFSLLLDVRI 148
+ ++++++ + RI
Sbjct: 538 TEVVEYAVMQEKRI 551
>gi|17043759|gb|AAL32280.1| coilin [Mus musculus]
Length = 569
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI +D +T ++
Sbjct: 456 DYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHDPETQQV 506
>gi|21410445|gb|AAH31167.1| Coilin [Mus musculus]
gi|148683920|gb|EDL15867.1| coilin [Mus musculus]
Length = 569
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI +D +T ++
Sbjct: 456 DYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHDPETQQV 506
>gi|348562532|ref|XP_003467064.1| PREDICTED: LOW QUALITY PROTEIN: coilin-like [Cavia porcellus]
Length = 613
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 63/119 (52%), Gaps = 13/119 (10%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI---LLAPVP 107
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GK+ ++ +T ++ +L+ +P
Sbjct: 455 DYNLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKLLSHNPETQQVDIEILSSLP 514
Query: 108 ------EYPLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRIIKHGEKANEVHV 160
++ L + + V E ++ + + + L+D R+I + +E HV
Sbjct: 515 AMKEPGKFDLVYHNENGTEV----VEYAVTQEKKITVFWRELIDPRLIIEPARFSEAHV 569
>gi|149053833|gb|EDM05650.1| coilin, isoform CRA_a [Rattus norvegicus]
Length = 572
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI +D +T ++
Sbjct: 459 DYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHDPETQQV 509
>gi|332246386|ref|XP_003272336.1| PREDICTED: coilin [Nomascus leucogenys]
Length = 576
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI---LLAPVP 107
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ GKI ++ +T ++ +L+ +P
Sbjct: 460 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGKILSHNPETQQVDIEILSSLP 519
Query: 108 EY--PLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRII 149
P F+ A E ++ + + + L+D R+I
Sbjct: 520 ALREPGKFDLVYHNENGAEVVEYAVTQESKITVFWRELIDPRLI 563
>gi|29789082|ref|NP_059056.1| coilin [Rattus norvegicus]
gi|15216997|gb|AAK92459.1|AF399643_1 p80 coilin [Rattus norvegicus]
Length = 569
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI +D +T ++
Sbjct: 456 DYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHDPETQQV 506
>gi|296202400|ref|XP_002748443.1| PREDICTED: coilin [Callithrix jacchus]
Length = 574
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 36/51 (70%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ GKI ++ +T ++
Sbjct: 458 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGKILSHNPETQQV 508
>gi|58332742|ref|NP_001011446.1| coilin [Xenopus (Silurana) tropicalis]
gi|56972620|gb|AAH88534.1| coilin [Xenopus (Silurana) tropicalis]
Length = 517
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G VIA++L+E++ ++TPE S ++ GKI +D T +I
Sbjct: 406 DYSLLPLLAAAPQVGKVIAFKLLEVSENYTPEVSQYKEGKILRFDPATQQI 456
>gi|440913365|gb|ELR62825.1| Coilin, partial [Bos grunniens mutus]
Length = 576
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 28 YENFDQFSEMPSFEKEISIGKDMEFEK-----LPPYISLPKEGDVIAYRLIELTSSWTPE 82
Y+ Q +EM + I I +E +K LP + P+ G+ IA++L+ELTS+++P+
Sbjct: 439 YQKQQQLNEMVTNSSTI-IQNPIETQKKDYSLLPLLAAAPQVGEKIAFKLLELTSNYSPD 497
Query: 83 PSSFRVGKISWYDSDTNKI---LLAPVP 107
S ++ G+I ++ +T ++ +L+ +P
Sbjct: 498 VSDYKEGRILSHNPETQQVDIEILSSLP 525
>gi|301759657|ref|XP_002915687.1| PREDICTED: coilin-like [Ailuropoda melanoleuca]
Length = 572
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 28 YENFDQFSEMPSFEKEISIGKDMEFEK-----LPPYISLPKEGDVIAYRLIELTSSWTPE 82
Y+ Q +EM + I I +E +K LP + P+ G+ IA++L+ELTS ++P+
Sbjct: 429 YQKHQQLNEMVTNSSTI-IQNPVETQKKDYSLLPLLAAAPQVGEKIAFKLLELTSDYSPD 487
Query: 83 PSSFRVGKISWYDSDTNKI 101
S ++ GKI ++ +T ++
Sbjct: 488 VSDYKEGKILSHNPETQQV 506
>gi|292494998|sp|Q09003.2|COIL_XENLA RecName: Full=Coilin; AltName: Full=Sphere organelles protein
SPH-1; Short=Sphere protein 1
gi|49114894|gb|AAH72777.1| LOC397940 protein [Xenopus laevis]
Length = 536
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G +IA++L+E++ ++TPE S ++ GKI +D T +I
Sbjct: 425 DYSSLPLLAAAPQVGKLIAFKLLEVSENYTPEVSEYKEGKILSFDPVTKQI 475
>gi|147904491|ref|NP_001081591.1| coilin [Xenopus laevis]
gi|397168|emb|CAA80553.1| sphere organelle protein sph-1 [Xenopus laevis]
Length = 536
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G +IA++L+E++ ++TPE S ++ GKI +D T +I
Sbjct: 425 DYSSLPLLAAAPQVGKLIAFKLLEVSENYTPEVSEYKEGKILSFDPVTKQI 475
>gi|84370049|ref|NP_001033601.1| coilin [Bos taurus]
gi|83638735|gb|AAI09845.1| Coilin [Bos taurus]
Length = 571
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 28 YENFDQFSEMPSFEKEISIGKDMEFEK-----LPPYISLPKEGDVIAYRLIELTSSWTPE 82
Y+ Q +EM + I I +E +K LP + P+ G+ IA++L+ELTS+++P+
Sbjct: 434 YQKQQQLNEMVTNSSTI-IQNPIETQKKDYSLLPLLAAAPQVGEKIAFKLLELTSNYSPD 492
Query: 83 PSSFRVGKISWYDSDTNKI 101
S ++ G+I ++ +T ++
Sbjct: 493 VSDYKEGRILSHNPETQQV 511
>gi|47216244|emb|CAG05940.1| unnamed protein product [Tetraodon nigroviridis]
Length = 325
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 62 PKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILL 103
P+ G IA++++ELT S++PE S ++VGK+ +D T +I L
Sbjct: 242 PQVGQKIAFKVLELTDSYSPEISDYKVGKMISFDHATQQIEL 283
>gi|344285371|ref|XP_003414435.1| PREDICTED: coilin [Loxodonta africana]
Length = 577
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 20 AAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEK-----LPPYISLPKEGDVIAYRLIE 74
++ + Y+ Q +EM + I I +E K LP + P+ G+ IA++L+E
Sbjct: 425 CVLNRNNEYQKQQQLNEMITNSSTI-IQNPVEIHKKDYSMLPLLAAAPQVGEKIAFKLLE 483
Query: 75 LTSSWTPEPSSFRVGKISWYDSDTNKI 101
LTS ++P+ S ++ GKI ++ +T ++
Sbjct: 484 LTSDYSPDVSDYKEGKILSHNPETQQV 510
>gi|4758024|ref|NP_004636.1| coilin [Homo sapiens]
gi|585632|sp|P38432.1|P80C_HUMAN RecName: Full=Coilin; AltName: Full=p80
gi|458436|gb|AAB81550.1| p80-coilin [Homo sapiens]
gi|14714509|gb|AAH10385.1| Coilin [Homo sapiens]
gi|119614928|gb|EAW94522.1| coilin [Homo sapiens]
gi|123988675|gb|ABM83853.1| coilin [synthetic construct]
gi|123999190|gb|ABM87175.1| coilin [synthetic construct]
gi|189069346|dbj|BAG36378.1| unnamed protein product [Homo sapiens]
Length = 576
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI---LLAPVP 107
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ G+I ++ +T ++ +L+ +P
Sbjct: 460 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGRILSHNPETQQVDIEILSSLP 519
Query: 108 EY--PLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRII 149
P F+ A E ++ + + + L+D R+I
Sbjct: 520 ALREPGKFDLVYHNENGAEVVEYAVTQESKITVFWKELIDPRLI 563
>gi|354472017|ref|XP_003498237.1| PREDICTED: coilin-like [Cricetulus griseus]
Length = 571
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI +D +T ++
Sbjct: 458 DYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHDPETQQV 508
>gi|296477096|tpg|DAA19211.1| TPA: coilin [Bos taurus]
Length = 571
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 28 YENFDQFSEMPSFEKEISIGKDMEFEK-----LPPYISLPKEGDVIAYRLIELTSSWTPE 82
Y+ Q +EM + I I +E +K LP + P+ G+ IA++L+ELTS+++P+
Sbjct: 434 YQKQQQLNEMVTNSSTI-IQNPIETQKKDYSLLPLLAAAPQVGEKIAFKLLELTSNYSPD 492
Query: 83 PSSFRVGKISWYDSDTNKI 101
S ++ G+I ++ +T ++
Sbjct: 493 VSDYKEGRILSHNPETQQV 511
>gi|397493104|ref|XP_003817453.1| PREDICTED: coilin [Pan paniscus]
Length = 576
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI---LLAPVP 107
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ G+I ++ +T ++ +L+ +P
Sbjct: 460 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGRILSHNPETQQVDIEILSSLP 519
Query: 108 EY--PLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRII 149
P F+ A E ++ + + + L+D R+I
Sbjct: 520 ALREPGKFDLVYHNENGAEVVEYAVTQESKITVFWKELIDPRLI 563
>gi|432872018|ref|XP_004072076.1| PREDICTED: coilin-like [Oryzias latipes]
Length = 331
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 56 PPYISLPKE---GDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILL 103
PP ++PK G IA++L+ELT ++TPE S ++ KI +D T +I L
Sbjct: 227 PPTPAVPKRPQPGQRIAFKLLELTENYTPEVSEYKEAKIVSFDPTTKQIEL 277
>gi|114669456|ref|XP_511900.2| PREDICTED: coilin isoform 2 [Pan troglodytes]
gi|410222516|gb|JAA08477.1| coilin [Pan troglodytes]
gi|410263120|gb|JAA19526.1| coilin [Pan troglodytes]
gi|410299062|gb|JAA28131.1| coilin [Pan troglodytes]
Length = 576
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI---LLAPVP 107
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ G+I ++ +T ++ +L+ +P
Sbjct: 460 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGRILSHNPETQQVDIEILSSLP 519
Query: 108 EY--PLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRII 149
P F+ A E ++ + + + L+D R+I
Sbjct: 520 ALREPGKFDLVYHNENGAEVVEYAVTQESKITVFWKELIDPRLI 563
>gi|426238554|ref|XP_004013216.1| PREDICTED: coilin [Ovis aries]
Length = 582
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 28 YENFDQFSEMPSFEKEISIGKDME-----FEKLPPYISLPKEGDVIAYRLIELTSSWTPE 82
Y+ Q +EM + I I ME + LP + P+ G+ IA++L+ELTS+++P+
Sbjct: 445 YQKQQQLNEMVTNSSTI-IQNPMETHRKDYSLLPLLAAAPQVGEKIAFKLLELTSNYSPD 503
Query: 83 PSSFRVGKISWYDSDTNKI---LLAPVPEY--PLAFEKKTDENVSALQSETLYGEDGSLR 137
S ++ G+I ++ +T ++ +L+ +P P F+ A E ++ +
Sbjct: 504 VSDYKEGRILSHNPETQQVDIEILSSLPAMKEPGKFDLVYHNENGAEVVEYAVTQEKRIT 563
Query: 138 IDFSLLLDVRII 149
+ + L+D R+I
Sbjct: 564 VFWRELIDPRLI 575
>gi|355680356|gb|AER96518.1| coilin [Mustela putorius furo]
Length = 149
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
Query: 28 YENFDQFSEMPSFEKEISIGKDMEFEK-----LPPYISLPKEGDVIAYRLIELTSSWTPE 82
Y+ Q +EM + I I +E K LP + P+ G+ IA++L+ELTS ++P+
Sbjct: 25 YQKHQQLNEMVTNSSTI-IQNPVETHKKDYSLLPLLAAAPQVGEKIAFKLLELTSDYSPD 83
Query: 83 PSSFRVGKISWYDSDTNKI---LLAPVP 107
S ++ GKI ++ +T ++ +L+ +P
Sbjct: 84 VSDYKEGKILSHNPETQQVDIEILSSLP 111
>gi|297700743|ref|XP_002827396.1| PREDICTED: coilin [Pongo abelii]
Length = 576
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI---LLAPVP 107
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ G+I ++ +T ++ +L+ +P
Sbjct: 460 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGRILSHNPETQQVDIEILSSLP 519
Query: 108 EY--PLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRII 149
P F+ A E ++ + + + L+D R+I
Sbjct: 520 ALREPGKFDLVYHNENGAEVVEYAVTQESKITVFWRELIDPRLI 563
>gi|350590516|ref|XP_003131673.3| PREDICTED: LOW QUALITY PROTEIN: coilin-like [Sus scrofa]
Length = 571
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 20 AAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEK-----LPPYISLPKEGDVIAYRLIE 74
++ + Y+ Q +EM + I I +E K LP + P+ GD IA++L+E
Sbjct: 420 CVLNRNAEYQKQQQLNEMVTNSSTI-IQNPVETRKRDYSLLPLLAAAPQVGDKIAFKLLE 478
Query: 75 LTSSWTPEPSSFRVGKISWYDSDTNKI 101
LTS + P+ S ++ GKI ++ +T ++
Sbjct: 479 LTSDYFPDISDYKEGKILSHNPETQQV 505
>gi|383873021|ref|NP_001244407.1| coilin [Macaca mulatta]
gi|380816854|gb|AFE80301.1| coilin [Macaca mulatta]
Length = 575
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 36/51 (70%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ G+I ++ +T ++
Sbjct: 459 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGRILSHNPETQQV 509
>gi|67970091|dbj|BAE01390.1| unnamed protein product [Macaca fascicularis]
Length = 575
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 36/51 (70%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ G+I ++ +T ++
Sbjct: 459 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGRILSHNPETQQV 509
>gi|402899722|ref|XP_003912837.1| PREDICTED: coilin [Papio anubis]
Length = 576
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 36/51 (70%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ G+I ++ +T ++
Sbjct: 460 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGRILSHNPETQQV 510
>gi|73966627|ref|XP_537686.2| PREDICTED: coilin [Canis lupus familiaris]
Length = 578
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 28 YENFDQFSEMPSFEKEISIGKDMEFEK-----LPPYISLPKEGDVIAYRLIELTSSWTPE 82
Y+ Q +EM + I I +E K LP + P+ G+ IA++L+ELTS ++P+
Sbjct: 435 YQKNQQLNEMVTNTSTI-IQNPIETHKKDYSLLPLLAAAPQVGEKIAFKLLELTSDYSPD 493
Query: 83 PSSFRVGKISWYDSDTNKI 101
S ++ GKI ++ +T ++
Sbjct: 494 VSDYKEGKILSHNPETQQV 512
>gi|189514|gb|AAA36412.1| p80-coilin, partial [Homo sapiens]
Length = 405
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI---LLAPVP 107
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ G+I ++ +T ++ +L+ +P
Sbjct: 289 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGRILSHNPETQQVDIEILSSLP 348
Query: 108 EY--PLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRII 149
P F+ A E ++ + + + L+D R+I
Sbjct: 349 ALREPGKFDLVYHNENGAEVVEYAVTQESKITVFWKELIDPRLI 392
>gi|348517919|ref|XP_003446480.1| PREDICTED: hypothetical protein LOC100711383 [Oreochromis
niloticus]
Length = 528
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 44 ISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILL 103
+S+ K ++ +P + P+ G IA++L+ELT ++TPE S ++ GKI +D +I L
Sbjct: 418 VSVPK-QDYNSMPLLAAPPQVGQRIAFKLLELTENYTPEVSEYKEGKIVSFDPINRQIEL 476
>gi|431890819|gb|ELK01698.1| Coilin [Pteropus alecto]
Length = 421
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 38/59 (64%)
Query: 43 EISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
E + + ++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI ++ +T ++
Sbjct: 297 ENPVERHKDYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHNPETQQV 355
>gi|291405748|ref|XP_002719145.1| PREDICTED: coilin [Oryctolagus cuniculus]
Length = 579
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 36/51 (70%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS+++P+ S ++ GKI ++ +T ++
Sbjct: 461 DYSLLPLLAAAPQVGEKIAFKLLELTSNYSPDVSDYKEGKILSHNPETQQV 511
>gi|328771507|gb|EGF81547.1| expressed protein [Batrachochytrium dendrobatidis JAM81]
Length = 197
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 14/79 (17%)
Query: 55 LPPYIS-LPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILL---------- 103
L PY+ LP+ G VIA++ +EL++++TPE S F+ ++ D+ + + +
Sbjct: 75 LMPYLQGLPRPGMVIAFKTLELSTAYTPEISEFKEAQVLSVDAISKRCSVKLLSCSSKSA 134
Query: 104 APVPEYPLAF---EKKTDE 119
AP+P P + KTD+
Sbjct: 135 APLPSDPSSMWGHATKTDQ 153
>gi|395845961|ref|XP_003795685.1| PREDICTED: coilin [Otolemur garnettii]
Length = 600
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI ++ +T +I
Sbjct: 455 DYTLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHNPETQQI 505
>gi|67969966|dbj|BAE01330.1| unnamed protein product [Macaca fascicularis]
Length = 248
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 36/51 (70%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ G+I ++ +T ++
Sbjct: 132 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGRILSHNPETQQV 182
>gi|307196889|gb|EFN78302.1| hypothetical protein EAI_04990 [Harpegnathos saltator]
Length = 446
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 49 DMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSD 97
++ E P P+ GD+I+++ ++L +TP+ S+F +G+ +W+ +D
Sbjct: 369 NLPLENFPVMTRKPRVGDIISFKTLKLADDYTPQISNFIIGE-TWFTTD 416
>gi|126307523|ref|XP_001368205.1| PREDICTED: hypothetical protein LOC100013845 [Monodelphis
domestica]
Length = 558
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYP 110
++ LP + P GD IA++L+EL ++P+ SS++ GKI Y+ D ++ + + P
Sbjct: 446 DYSLLPQLAAPPLVGDKIAFKLLELRPDYSPDVSSYKEGKIINYNVDAQEVEIEILSSLP 505
Query: 111 LAFE 114
+ E
Sbjct: 506 VVKE 509
>gi|417402937|gb|JAA48298.1| Putative coilin [Desmodus rotundus]
Length = 577
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 35/51 (68%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI 101
++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GKI ++ +T ++
Sbjct: 461 DYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHNPETQQV 511
>gi|432110522|gb|ELK34111.1| E3 ubiquitin/ISG15 ligase TRIM25 [Myotis davidii]
Length = 961
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 68/127 (53%), Gaps = 13/127 (10%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKI---LLAPVP 107
++ LP + P+ G+ IA++L+ELT ++P+ S ++ GKI ++ +T ++ +L+ P
Sbjct: 347 DYSLLPLLAAAPQIGEKIAFKLLELTPDYSPDVSDYKEGKILNHNPETQQVDIEILSSTP 406
Query: 108 EYPLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRIIKHGEKANEVHVGDQDFVT 167
P+ K D + E+GS +++++ + R + G ++ ++ V + +
Sbjct: 407 VSPIKEPGKFD--------LVYHNENGSEVVEYAVTQE-RKVGQGPQSPKLPV-EAVWKA 456
Query: 168 NFNEVHL 174
+F + HL
Sbjct: 457 SFCQEHL 463
>gi|302851523|ref|XP_002957285.1| hypothetical protein VOLCADRAFT_107618 [Volvox carteri f.
nagariensis]
gi|300257380|gb|EFJ41629.1| hypothetical protein VOLCADRAFT_107618 [Volvox carteri f.
nagariensis]
Length = 1187
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 50 MEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPE- 108
+E++ LP GD++AY+L+E+ P S +R ++ DS T ++L P P+
Sbjct: 656 VEYDSLPAVQGPVASGDILAYKLLEIGLDMCPRVSGWRQCRVVAVDSSTGSVVLEPHPDP 715
Query: 109 --YPLAFEKKTDE 119
+PL K DE
Sbjct: 716 RVHPL--RKDLDE 726
>gi|351713881|gb|EHB16800.1| Coilin [Heterocephalus glaber]
Length = 582
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 40 FEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTN 99
F+ + + K ++ LP + P+ G+ IA++L+ELTS ++P+ S ++ GK+ ++ +T
Sbjct: 475 FQNPVELPKK-DYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKLLSHNPETQ 533
Query: 100 KILLAPVPEYPLAFEKKTDENVSALQSETLYGEDGSLRIDFSLLLDVRIIKHG 152
++ + + P E + V + E+G+ ++++++ + R G
Sbjct: 534 QVDIEILSSLPAVKEPGKFDLV-------YHSENGTEVVEYAVMQERRTPPQG 579
>gi|405969350|gb|EKC34326.1| Sphere organelles protein SPH-1 [Crassostrea gigas]
Length = 472
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 12 GQKWGRDKAAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYR 71
Q G D F+ + E+ S +P+ I+I +++K P P GD IA++
Sbjct: 338 SQSNGVDDQIFTSMDMAES--NLSGIPN----IAIPVRRDYQKFPLLQGDPNPGDKIAFK 391
Query: 72 LIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEY 109
++E++ +TPE ++ +I ++S + + L +P +
Sbjct: 392 ILEMSDDYTPEVGDYKEAEIIGFNSSSQMVELKIIPGF 429
>gi|47271366|ref|NP_571587.1| coilin [Danio rerio]
gi|28279118|gb|AAH45858.1| Coilin p80 [Danio rerio]
gi|182889138|gb|AAI64689.1| Coil protein [Danio rerio]
Length = 528
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 46 IGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDT 98
+ ++ LP + P G IA++L+ELT ++TPE S ++ GKI ++ T
Sbjct: 415 LAPKRDYATLPLLAAPPAVGQKIAFKLLELTENYTPEVSDYKEGKILAFNPQT 467
>gi|443701287|gb|ELT99803.1| hypothetical protein CAPTEDRAFT_216386 [Capitella teleta]
Length = 506
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 61 LPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYD----SDTNKILLAPVPEYPLAFEKK 116
+P+ GD IA++++E+T ++TPE SS++ ++ Y+ S T ++L + + L
Sbjct: 413 IPRAGDHIAFKIVEMTENYTPEVSSYKEARVLSYNPTQGSVTVQLLTSNGDKKKLGRFDI 472
Query: 117 TDENVSALQSETLYGEDGSLRIDFSLLLDVRII 149
T E + + ++ + + F+ +LD R++
Sbjct: 473 TLETEGEILTNVESEDENQMTVQFTSMLDCRLL 505
>gi|363740771|ref|XP_415654.3| PREDICTED: coilin [Gallus gallus]
Length = 608
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILL 103
++ LP + P+ G+ IA++ +EL +++PE SS++ G+I +++D +I L
Sbjct: 488 DYSVLPLLAAPPQVGERIAFKRLELNENYSPEVSSYKEGRIISWNADKKQIEL 540
>gi|6942188|gb|AAF32349.1|AF220008_1 coilin p80, partial [Danio rerio]
Length = 170
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 46 IGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDT 98
+ ++ LP + P G IA++L+ELT ++TPE S ++ GKI ++ T
Sbjct: 57 LAPKRDYATLPLLAAPPAVGQKIAFKLLELTENYTPEVSDYKEGKILAFNPQT 109
>gi|426357606|ref|XP_004046128.1| PREDICTED: coilin-like [Gorilla gorilla gorilla]
Length = 144
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 30/41 (73%)
Query: 51 EFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKI 91
++ LP + P+ G+ IA++L+ELTSS++P+ S ++ G+I
Sbjct: 93 DYSLLPLLAAAPQVGEKIAFKLLELTSSYSPDVSDYKEGRI 133
>gi|328780274|ref|XP_003249779.1| PREDICTED: hypothetical protein LOC100577885 [Apis mellifera]
Length = 425
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 49 DMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILL 103
+ +F+ P I P+ D+IA++++++ +TP+ S F V +I Y S+T+ +L
Sbjct: 283 NTDFKTYPIMIEKPQLKDIIAFKMLKIGLDYTPQISDFIVAEILSYCSETSVYVL 337
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.130 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,942,651,356
Number of Sequences: 23463169
Number of extensions: 216751139
Number of successful extensions: 398409
Number of sequences better than 100.0: 124
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 398180
Number of HSP's gapped (non-prelim): 187
length of query: 305
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 163
effective length of database: 9,027,425,369
effective search space: 1471470335147
effective search space used: 1471470335147
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 76 (33.9 bits)