RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 045521
(204 letters)
>d1qp8a2 c.23.12.1 (A:1-82,A:264-302) Putative formate dehydrogenase
{Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Length = 121
Score = 76.2 bits (187), Expect = 9e-19
Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 22/103 (21%)
Query: 4 DAELIDSLPKLEIVATCSAGLDKIDLVKCKEKGIQVTNTPDVLTDDVADAAIGLTLAVLR 63
AE + +P+L+ + +AGLD + V + + +R
Sbjct: 41 TAEELAKMPRLKFIQVVTAGLDHLPWESIPPHVT-VAGNAGSNGYGNERVWRQMVMEAVR 99
Query: 64 RFVRSEDGEMGYKLTTKISGRSVGIIGLGRIGMAVAKRAEAFG 106
+ G +AKR + G
Sbjct: 100 N---------------------LITYATGGRPRNIAKREDYIG 121
>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase
{Hyphomicrobium methylovorum [TaxId: 84]}
Length = 191
Score = 76.5 bits (187), Expect = 4e-18
Identities = 45/190 (23%), Positives = 63/190 (33%), Gaps = 62/190 (32%)
Query: 46 LTDDVADAAIGLTLAVLRRFVRSE---------DGEMGYKLTTKISGRSVGIIGLGRIGM 96
+T A+ A+ L L RR E E + K+ +++GI G G IG
Sbjct: 1 VTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQ 60
Query: 97 AVAKRAEAFGCFISYRSRAEK------------------------------PNTKYKGAL 126
A+AKRA+ F I Y P+T
Sbjct: 61 ALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYF 120
Query: 127 VDESEL-----------------------VSALLEDRLAAAVLDVFEHEPQVPEELFGLE 163
+++ + V+AL RLA A DVF EP + E + L
Sbjct: 121 FNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLP 180
Query: 164 NVVLLPHAAS 173
N L PH S
Sbjct: 181 NTFLFPHIGS 190
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 184
Score = 61.5 bits (148), Expect = 1e-12
Identities = 45/181 (24%), Positives = 63/181 (34%), Gaps = 57/181 (31%)
Query: 47 TDDVADAAIGLTLAVLRRF------VRSEDGEMGYKLTTKISGRSVGIIGLGRIGMAVAK 100
A+ A+ L LA R+ +R + T+I G++VG++GLGRIG VA+
Sbjct: 2 IHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQ 61
Query: 101 RAEAFGCFISYRSRAEK----------------------------PNTKYKGALVDESEL 132
R AFG ++ P T L+D+ L
Sbjct: 62 RIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEAL 121
Query: 133 -----------------------VSALLEDRLAAAVLDVFEHEPQVPEELFGLENVVLLP 169
A+ + AA LDVF EP LF L VV+ P
Sbjct: 122 AKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTP 181
Query: 170 H 170
H
Sbjct: 182 H 182
>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human
(Homo sapiens), Ctbp1 [TaxId: 9606]}
Length = 193
Score = 58.5 bits (140), Expect = 1e-11
Identities = 40/192 (20%), Positives = 59/192 (30%), Gaps = 67/192 (34%)
Query: 48 DDVADAAIGLTLAVLRRF------VRS-------EDGEMGYKLTTKISGRSVGIIGLGRI 94
++ AD+ + L + RR +R E +I G ++GIIGLGR+
Sbjct: 1 EETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRV 60
Query: 95 G------------------------------------------------MAVAKRAEAFG 106
G +
Sbjct: 61 GQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHH 120
Query: 107 CFISYRSRAEKPNTKY----KGALVDESELVSALLEDRLAAAVLDVFEHEPQVPEE--LF 160
+ + + +G LVDE L AL E R+ A LDV E EP + L
Sbjct: 121 LINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLK 180
Query: 161 GLENVVLLPHAA 172
N++ PHAA
Sbjct: 181 DAPNLICTPHAA 192
>d1gdha2 c.23.12.1 (A:2-100,A:292-321) D-glycerate dehydrogenase
{Hyphomicrobium methylovorum [TaxId: 84]}
Length = 129
Score = 55.8 bits (134), Expect = 6e-11
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 12 PKLEIVATCSAGLDKIDLVKCKEKGIQVTNTPDVLTDDVADAAIGLTLAVLRRF 65
++ ++T S G D IDL CK +GI+V N P T D A + F
Sbjct: 66 ENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGATQAREDMAHQANDLIDALF 119
>d2naca2 c.23.12.1 (A:1-147,A:336-374) Formate dehydrogenase
{Pseudomonas sp., strain 101 [TaxId: 306]}
Length = 186
Score = 56.9 bits (137), Expect = 6e-11
Identities = 11/66 (16%), Positives = 19/66 (28%)
Query: 4 DAELIDSLPKLEIVATCSAGLDKIDLVKCKEKGIQVTNTPDVLTDDVADAAIGLTLAVLR 63
E I L++ T G D +DL ++ + V + + A
Sbjct: 104 TPERIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSTTLTAQARYAAGTREI 163
Query: 64 RFVRSE 69
E
Sbjct: 164 LECFFE 169
>d1mx3a2 c.23.12.1 (A:27-125,A:319-352) Transcription corepressor
CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}
Length = 133
Score = 55.3 bits (133), Expect = 8e-11
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 4 DAELIDSLPKLEIVATCSAGLDKIDLVKCKEKGIQVTNTPDVLTDDVADAAIGLTLAVLR 63
E ++ L I+ +G D ID+ + GI V N P A+I + R
Sbjct: 56 TREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASV-YSEQASIEMREEAAR 114
Query: 64 RFVRSEDGEM 73
R+ G +
Sbjct: 115 EIRRAITGRI 124
>d1dxya2 c.23.12.1 (A:1-100,A:300-330) D-2-hydroxyisocaproate
dehydrogenase {Lactobacillus casei [TaxId: 1582]}
Length = 131
Score = 51.6 bits (123), Expect = 2e-09
Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 4 DAELIDS--LPKLEIVATCSAGLDKIDLVKCKEKGIQVTNTPDVLTDDVADAAIGLTLAV 61
A + + ++ + + G D ID+ K+ GI+++N P V + +
Sbjct: 57 AAGVFEKMHAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPAYTETAVHNMVYFSLQHL 116
Query: 62 LRRFVRSE 69
+ + E
Sbjct: 117 VDFLTKGE 124
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus
helveticus [TaxId: 1587]}
Length = 197
Score = 52.5 bits (124), Expect = 3e-09
Identities = 32/193 (16%), Positives = 54/193 (27%), Gaps = 70/193 (36%)
Query: 50 VADAAIGLTLAVLRRF------VRSEDGEMGYKLTTKISGRSVGIIGLGRIGMAVAKRAE 103
+A+ A +LR+ V D + ++ + VG++G G IG + E
Sbjct: 4 IAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIME 63
Query: 104 AFGCFISYRSRAEKPNTKYKGA-------------------------------------- 125
FG + P + KG
Sbjct: 64 GFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMK 123
Query: 126 ------------LVDESELVSALLEDRLAAAVLDVFEHEPQVPEE--------------L 159
LVD ++ L ++ +DV+E E + E L
Sbjct: 124 QDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADL 183
Query: 160 FGLENVVLLPHAA 172
NV++ P A
Sbjct: 184 IARPNVLVTPKTA 196
>d1j4aa2 c.23.12.1 (A:2-103,A:301-332) D-lactate dehydrogenase
{Lactobacillus helveticus [TaxId: 1587]}
Length = 134
Score = 51.1 bits (122), Expect = 3e-09
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Query: 4 DAELIDSLP--KLEIVATCSAGLDKIDLVKCKEKGIQVTNTPDVLTDDVADAAIGLTLAV 61
AE + +L + ++ + G+D ID+ K KE G Q+TN P A+ +
Sbjct: 58 IAETLQALADNGITKMSLRNVGVDNIDMAKAKELGFQITNVPVY---SYTTHAVRNMVVK 114
Query: 62 LRRFVRS 68
Sbjct: 115 AFDNNLE 121
>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp.,
strain 101 [TaxId: 306]}
Length = 188
Score = 51.6 bits (122), Expect = 5e-09
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 135 ALLEDRLAAAVLDVFEHEPQVPE-ELFGLENVVLLPHAA 172
AL RLA DV+ +P + + + PH +
Sbjct: 149 ALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHIS 187
Score = 33.8 bits (76), Expect = 0.006
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 50 VADAAIGLTLAVLRRFVRSE--------DGEMGYKLTTKISGRSVGIIGLGRIGMAVAKR 101
VA+ + + L+++R ++ S + + VG + GRIG+AV +R
Sbjct: 3 VAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRR 62
Query: 102 AEAFGCFISYRSR 114
F + Y R
Sbjct: 63 LAPFDVHLHYTDR 75
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon
Pyrobaculum aerophilum [TaxId: 13773]}
Length = 181
Score = 51.3 bits (121), Expect = 7e-09
Identities = 11/37 (29%), Positives = 13/37 (35%), Gaps = 2/37 (5%)
Query: 138 EDRLAAAVLDVFEHEPQVPE--ELFGLENVVLLPHAA 172
E DV+ + E F L NVV P A
Sbjct: 144 ERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVA 180
Score = 31.7 bits (70), Expect = 0.032
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 48 DDVADAAIGLTLAVLRRFVRSED 70
D VA+ A+ L LA +R ++ +
Sbjct: 2 DAVAEFALALLLAPYKRIIQYGE 24
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 188
Score = 50.4 bits (119), Expect = 2e-08
Identities = 38/186 (20%), Positives = 56/186 (30%), Gaps = 60/186 (32%)
Query: 47 TDDVADAAIGLTLAVLRRF------VRSEDGEMGYKLTTKISGRSVGIIGLGRIGMAVAK 100
T VA+ IG L +LR G + + G+ +GIIG G IG +
Sbjct: 2 TRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGI 61
Query: 101 RAEAFGCFISYRSRAEKPN--------------------------TKYKGALVDESEL-- 132
AE+ G ++ + K ++ E+
Sbjct: 62 LAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISL 121
Query: 133 ---------------------VSALLEDRLAAAVLDVFEHEPQVPEE-----LFGLENVV 166
AL LA A +DVF EP + L +NV+
Sbjct: 122 MKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVL 181
Query: 167 LLPHAA 172
L PH
Sbjct: 182 LTPHIG 187
>d1ygya2 c.23.12.1 (A:3-98,A:283-316) Phosphoglycerate dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 130
Score = 45.1 bits (106), Expect = 5e-07
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 5 AELIDSLPKLEIVATCSAGLDKIDLVKCKEKGIQVTNTPDVLTDDVADAAIGLTLAVLRR 64
AE++ + PKL+IVA GLD +D+ +G+ V N P + A G +A R
Sbjct: 56 AEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSASTAEAQDRAGTDVAESVR 115
Query: 65 FVRSED 70
+ +
Sbjct: 116 LALAGE 121
>d1sc6a2 c.23.12.1 (A:7-107,A:296-326) Phosphoglycerate
dehydrogenase {Escherichia coli [TaxId: 562]}
Length = 132
Score = 44.3 bits (104), Expect = 1e-06
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 4 DAELIDSLPKLEIVATCSAGLDKIDLVKCKEKGIQVTNTPDVLTDDVADAAIGLTLAVLR 63
++I++ KL + + G +++DL ++GI V N P T + + L
Sbjct: 60 TEDVINAAEKLVAIGAFAIGTNQVDLDAAAKRGIPVFNAPFSSTQEAQENIGLEVAGKLI 119
Query: 64 RF 65
++
Sbjct: 120 KY 121
>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase
{Lactobacillus casei [TaxId: 1582]}
Length = 199
Score = 38.7 bits (88), Expect = 2e-04
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 14/51 (27%)
Query: 136 LLEDRLAAAVLDVFEHEPQVP--------------EELFGLENVVLLPHAA 172
L +LA +D +E+E + +EL G+ NVVL PH A
Sbjct: 147 LKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIA 197
Score = 30.2 bits (66), Expect = 0.12
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 47 TDDVADAAIGLTLAVLRRFVRSED 70
+A+ A+ TL +LR + +
Sbjct: 2 PAAIAEFALTDTLYLLRNMGKVQA 25
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate
ligase MurD {Escherichia coli [TaxId: 562]}
Length = 93
Score = 35.0 bits (80), Expect = 8e-04
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 81 ISGRSVGIIGLGRIGMAVAKRAEAFGCFISYRSRAEKPNTKYK 123
G++V IIGLG G++ A G P K
Sbjct: 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDK 45
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA
{Synechocystis sp. pcc 6803 [TaxId: 1148]}
Length = 165
Score = 33.6 bits (75), Expect = 0.006
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 86 VGIIGLGRIGMAVAKRAEAFGCFISYRSRAEKPNTK 121
+G++GLG IG ++A G ++ SR + K
Sbjct: 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEK 38
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 163
Score = 33.8 bits (77), Expect = 0.007
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 81 ISGRSVGIIGLGRIGMAVAKRAEAFGCFISYRSRAEKP 118
I+G+ + G G +G A+ FG +
Sbjct: 22 IAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPIN 59
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId:
1423]}
Length = 134
Score = 33.0 bits (74), Expect = 0.009
Identities = 16/116 (13%), Positives = 33/116 (28%), Gaps = 12/116 (10%)
Query: 84 RSVGIIGLGRIGMAVAKRAEAFGCFISYRSRAEKPNTKYKGALVDESELVSALLE----- 138
+ +IGLGR G ++ K G + E+ Y +
Sbjct: 1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSL 60
Query: 139 -----DRLAAAVLDVFEHEPQVPE--ELFGLENVVLLPHAASGTEETRKATADIVI 187
+ + A+ + + + N+ + + K AD +I
Sbjct: 61 GIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRII 116
>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 156
Score = 31.4 bits (70), Expect = 0.041
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 86 VGIIGLGRIGMAVAKR-AEAFGCFISYRSRAEKPNTKYKGA 125
V IGLG +G +A A F + R+ + + +
Sbjct: 3 VAFIGLGAMGYPMAGHLARRFPTLVWNRTFEKALRHQEEFG 43
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1
{Salmonella typhimurium [TaxId: 90371]}
Length = 113
Score = 29.7 bits (66), Expect = 0.093
Identities = 7/39 (17%), Positives = 15/39 (38%)
Query: 80 KISGRSVGIIGLGRIGMAVAKRAEAFGCFISYRSRAEKP 118
++ R I+G G + A+ G ++ + P
Sbjct: 9 QLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIP 47
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 152
Score = 30.2 bits (67), Expect = 0.098
Identities = 15/98 (15%), Positives = 27/98 (27%)
Query: 86 VGIIGLGRIGMAVAKRAEAFGCFISYRSRAEKPNTKYKGALVDESELVSALLEDRLAAAV 145
VG IG G + +A R + G + P+T + V +E +
Sbjct: 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVIS 62
Query: 146 LDVFEHEPQVPEELFGLENVVLLPHAASGTEETRKATA 183
+ + E R A++
Sbjct: 63 AVTPGVALGAARRAGRHVRGIYVDINNISPETVRMASS 100
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 132
Score = 29.9 bits (66), Expect = 0.10
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 86 VGIIGLGRIGMAVAKRAEAFGCFISYRSRAEKPNTKY 122
+ I G+GR+G +AK G I + K
Sbjct: 3 IIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKA 39
>d1j5pa4 c.2.1.3 (A:-1-108,A:220-241) Hypothetical protein TM1643
{Thermotoga maritima [TaxId: 2336]}
Length = 132
Score = 29.2 bits (65), Expect = 0.16
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 86 VGIIGLGRIGMAVAKRAEAFGCFISYRSRAEKPNT 120
V IIG+G IG + + + R + P
Sbjct: 5 VLIIGMGNIGKKLVELGNFEKIYAYDRISKDIPGV 39
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep
(Ovis orientalis aries) [TaxId: 9940]}
Length = 176
Score = 29.6 bits (65), Expect = 0.17
Identities = 4/16 (25%), Positives = 8/16 (50%)
Query: 86 VGIIGLGRIGMAVAKR 101
+ +IGL +G +
Sbjct: 5 IALIGLAVMGQNLILN 20
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 162
Score = 29.5 bits (65), Expect = 0.19
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 86 VGIIGLGRIGMAVAKR 101
+ IGLG +G +A
Sbjct: 4 IAFIGLGHMGAPMATN 19
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase
{Trypanosoma brucei [TaxId: 5691]}
Length = 178
Score = 29.2 bits (64), Expect = 0.23
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 86 VGIIGLGRIGMAVAKR 101
VG++GLG +G +A
Sbjct: 4 VGVVGLGVMGANLALN 19
>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase
At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 184
Score = 28.8 bits (63), Expect = 0.33
Identities = 4/15 (26%), Positives = 9/15 (60%)
Query: 86 VGIIGLGRIGMAVAK 100
+G++G I V++
Sbjct: 4 IGVMGCADIARKVSR 18
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase
{Salmonella typhimurium [TaxId: 90371]}
Length = 161
Score = 28.2 bits (62), Expect = 0.46
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 86 VGIIGLGRIGMAVAKR 101
VG IGLG +G ++K
Sbjct: 3 VGFIGLGIMGKPMSKN 18
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 28.1 bits (62), Expect = 0.53
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 79 TKISGRSVGIIGLGRIGMAVA 99
+ + ++G+G++GMA A
Sbjct: 16 ATVPNNKITVVGVGQVGMACA 36
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex
aeolicus [TaxId: 63363]}
Length = 171
Score = 28.0 bits (61), Expect = 0.58
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 84 RSVGIIGLGRIGMAVAKRAEAFG 106
++V I+G+G +G + AK G
Sbjct: 2 QNVLIVGVGFMGGSFAKSLRRSG 24
>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM
{Escherichia coli [TaxId: 562]}
Length = 164
Score = 28.0 bits (61), Expect = 0.60
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 86 VGIIGLGRIGMAVAKRA 102
+G++GLG I
Sbjct: 4 IGVVGLGGIAQKAWLPV 20
>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC
{Streptococcus pyogenes [TaxId: 1314]}
Length = 152
Score = 27.7 bits (60), Expect = 0.70
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 86 VGIIGLGRIGMAVAK 100
+GIIG+G++ A+ K
Sbjct: 3 IGIIGVGKMASAIIK 17
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 27.3 bits (60), Expect = 0.84
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 80 KISGRSVGIIGLGRIGMAVA 99
K+S + ++G+G +GMA A
Sbjct: 16 KLSRCKITVVGVGDVGMACA 35
>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose
oxidoreductase, N-terminal domain {Zymomonas mobilis
[TaxId: 542]}
Length = 221
Score = 27.7 bits (60), Expect = 0.89
Identities = 4/17 (23%), Positives = 7/17 (41%)
Query: 86 VGIIGLGRIGMAVAKRA 102
I+GLG+ +
Sbjct: 36 YAIVGLGKYALNQILPG 52
>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 172
Score = 27.1 bits (59), Expect = 1.1
Identities = 6/54 (11%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Query: 86 VGIIGLGRIGM----AVAKRAEAFGCFISYRSRAEKPNTKYKGALVDESELVSA 135
V ++G+GR G + A + + + + + + + +
Sbjct: 10 VVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLDEVRQISLEDALRS 63
>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312
{Thermotoga maritima [TaxId: 2336]}
Length = 181
Score = 27.2 bits (59), Expect = 1.1
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 86 VGIIGLGRIGMAVAKRA 102
+GI+G G + A
Sbjct: 6 LGIVGCGIAARELHLPA 22
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium
cellulolyticum [TaxId: 1521]}
Length = 380
Score = 27.6 bits (60), Expect = 1.2
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 4 DAELIDSLPKLEIVATCSAGLDKIDLVKCKEKGIQVTNTPD 44
DA LI P L+I D ++ VK G + NT D
Sbjct: 3 DASLI---PNLQIPQKNIPNNDGMNFVKGLRLGWNLGNTFD 40
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA
{Haemophilus influenzae [TaxId: 727]}
Length = 152
Score = 26.8 bits (58), Expect = 1.3
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 74 GYKLTTKISGRSVGIIG-LGRIGMAVAKRAEAFG 106
G+K T + I+G G++G A+ A G
Sbjct: 1 GFK-TINSDIHKIVIVGGYGKLGGLFARYLRASG 33
>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga
maritima [TaxId: 2336]}
Length = 153
Score = 26.9 bits (58), Expect = 1.4
Identities = 2/16 (12%), Positives = 6/16 (37%)
Query: 86 VGIIGLGRIGMAVAKR 101
+ +G G + +
Sbjct: 2 LNFVGTGTLTRFFLEC 17
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 27.1 bits (58), Expect = 1.5
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 82 SGRSVGIIGLGRIGMAVAKRAEAFG 106
+GR V ++G G G AK +
Sbjct: 1 AGRKVVVVGGGTGGATAAKYIKLAD 25
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice
blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 182
Score = 26.9 bits (58), Expect = 1.5
Identities = 7/43 (16%), Positives = 15/43 (34%)
Query: 82 SGRSVGIIGLGRIGMAVAKRAEAFGCFISYRSRAEKPNTKYKG 124
+ +SV ++G G + G ++ R + K
Sbjct: 1 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA 43
>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii
[TaxId: 53953]}
Length = 172
Score = 26.5 bits (58), Expect = 1.6
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 86 VGIIGLGRIGMAVAKRAEA 104
VG+ G G IG VA
Sbjct: 5 VGVNGYGTIGKRVAYAVTK 23
>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Achromobacter xylosoxidans
[TaxId: 85698]}
Length = 173
Score = 26.6 bits (58), Expect = 1.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 86 VGIIGLGRIGMAVAKRA 102
V I G GRIG + +
Sbjct: 4 VAINGYGRIGRNILRAH 20
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 26.2 bits (57), Expect = 1.8
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 82 SGRSVGIIGLGRIGMAVA 99
G V +IG G +G +
Sbjct: 5 GGARVVVIGAGFVGASYV 22
>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 178
Score = 26.1 bits (57), Expect = 2.2
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 86 VGIIGLGRIGMAVAK 100
V + G G IG VA
Sbjct: 4 VAVNGYGTIGKRVAD 18
>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Malaria parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 166
Score = 26.2 bits (57), Expect = 2.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 86 VGIIGLGRIGMAVAKRA 102
+GI G GRIG V + A
Sbjct: 3 LGINGFGRIGRLVFRAA 19
>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}
Length = 168
Score = 26.2 bits (57), Expect = 2.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 86 VGIIGLGRIGMAVAK 100
VGI G GRIG V +
Sbjct: 3 VGINGFGRIGRQVFR 17
>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus
[TaxId: 2180]}
Length = 171
Score = 26.1 bits (57), Expect = 2.4
Identities = 7/21 (33%), Positives = 8/21 (38%)
Query: 86 VGIIGLGRIGMAVAKRAEAFG 106
V I G G +G VA
Sbjct: 4 VAINGYGTVGKRVADAIAQQD 24
>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048
{Vibrio cholerae [TaxId: 666]}
Length = 167
Score = 25.9 bits (56), Expect = 2.4
Identities = 5/17 (29%), Positives = 7/17 (41%)
Query: 86 VGIIGLGRIGMAVAKRA 102
+ +IGLG I
Sbjct: 4 IAMIGLGDIAQKAYLPV 20
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein
MoeB {Escherichia coli [TaxId: 562]}
Length = 247
Score = 26.5 bits (57), Expect = 2.4
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 7/43 (16%)
Query: 62 LRRFVR----SEDGEMGYKLTTKISGRSVGIIGLGRIGMAVAK 100
+ R+ R G + + V I+GLG +G A ++
Sbjct: 8 MLRYNRQIILRGFDFDGQE---ALKDSRVLIVGLGGLGCAASQ 47
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 202
Score = 26.1 bits (56), Expect = 2.7
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 86 VGIIGLGRIGMAVAKRAEAFG 106
+ I GLG +G A A G
Sbjct: 3 ISIFGLGYVGAVCAGCLSARG 23
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 26.5 bits (57), Expect = 2.7
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 84 RSVGIIGLGRIGMAVAKRAEAFGCFISYR 112
R + IIG G G+ AK A F
Sbjct: 5 RKIAIIGAGPSGLVTAKALLAEKAFDQVT 33
>d1p2za1 b.121.2.2 (A:5-650) Adenovirus hexon {Human adenovirus type
2 [TaxId: 10515]}
Length = 646
Score = 26.2 bits (58), Expect = 2.8
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 154 QVPEELFGLENVVLLP 169
QVP++ F ++N++LLP
Sbjct: 572 QVPQKFFAIKNLLLLP 587
>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid
dehydrogenase (DAPDH) {Corynebacterium glutamicum
[TaxId: 1718]}
Length = 170
Score = 26.0 bits (56), Expect = 2.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 86 VGIIGLGRIGMAVAK 100
V I+G G +G +V K
Sbjct: 6 VAIVGYGNLGRSVEK 20
>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC
{Neisseria meningitidis, serogroup B [TaxId: 487]}
Length = 152
Score = 25.7 bits (55), Expect = 3.5
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 86 VGIIGLGRIGMAVAK 100
V +G G + AVA
Sbjct: 3 VYFLGGGNMAAAVAG 17
>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {South China Sea lobster
(Palinurus versicolor) [TaxId: 150436]}
Length = 169
Score = 25.6 bits (56), Expect = 3.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 86 VGIIGLGRIGMAVAKRA 102
+GI G GRIG V + A
Sbjct: 3 IGINGFGRIGRLVLRAA 19
>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Spinach (Spinacia oleracea)
[TaxId: 3562]}
Length = 172
Score = 25.7 bits (56), Expect = 3.5
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 86 VGIIGLGRIGMAVAKRAEA 104
V I G GRIG +
Sbjct: 3 VAINGFGRIGRNFLRCWHG 21
>d1g2ra_ d.192.1.1 (A:) Hypothetical cytosolic protein SP0554
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 94
Score = 24.7 bits (54), Expect = 3.5
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 62 LRRFVRSEDGEMGYKLTTKISGRSV 86
L R V++++G++ T K +GR
Sbjct: 20 LLRIVKNKEGQVFIDPTGKANGRGA 44
>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}
Length = 190
Score = 25.8 bits (56), Expect = 3.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 86 VGIIGLGRIGMAVAKRA 102
VGI G GRIG V +
Sbjct: 5 VGINGFGRIGRMVFQAL 21
>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca
1503 [TaxId: 1422]}
Length = 171
Score = 25.4 bits (55), Expect = 3.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 86 VGIIGLGRIGMAVAKRA 102
VGI G GRIG V + A
Sbjct: 4 VGINGFGRIGRNVFRAA 20
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch
{Escherichia coli [TaxId: 562]}
Length = 153
Score = 25.6 bits (55), Expect = 3.9
Identities = 2/19 (10%), Positives = 6/19 (31%)
Query: 88 IIGLGRIGMAVAKRAEAFG 106
+ G + + + G
Sbjct: 8 VCGHSILAINTILQLNQRG 26
>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Human(Homo sapiens), liver
isoform [TaxId: 9606]}
Length = 169
Score = 25.3 bits (55), Expect = 4.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 86 VGIIGLGRIGMAVAKRA 102
VG+ G GRIG V + A
Sbjct: 4 VGVNGFGRIGRLVTRAA 20
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK
{Archaeon Methanothermobacter thermautotrophicus [TaxId:
145262]}
Length = 129
Score = 25.2 bits (54), Expect = 4.3
Identities = 3/22 (13%), Positives = 6/22 (27%)
Query: 88 IIGLGRIGMAVAKRAEAFGCFI 109
I G + + F+
Sbjct: 5 ICGWSESTLECLRELRGSEVFV 26
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase
{Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}
Length = 163
Score = 25.2 bits (55), Expect = 4.5
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 81 ISGRSVGIIGLGRIGMAVAKRAEAFGC 107
ISG+ V I G G +G A + G
Sbjct: 21 ISGKIVVICGYGDVGKGCASSMKGLGA 47
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 25.0 bits (54), Expect = 4.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 84 RSVGIIGLGRIGMAVA 99
+ + IIG G +G A
Sbjct: 2 KKISIIGAGFVGSTTA 17
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 25.1 bits (54), Expect = 4.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 84 RSVGIIGLGRIGMAVA 99
R +GIIGLG +G AVA
Sbjct: 2 RKIGIIGLGNVGAAVA 17
>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Thermotoga maritima [TaxId:
2336]}
Length = 169
Score = 25.2 bits (55), Expect = 4.7
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 86 VGIIGLGRIGMAVAKRA 102
V I G GRIG V +
Sbjct: 3 VAINGFGRIGRLVYRII 19
>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus
cereus [TaxId: 1396]}
Length = 257
Score = 25.5 bits (54), Expect = 4.8
Identities = 8/48 (16%), Positives = 16/48 (33%)
Query: 144 AVLDVFEHEPQVPEELFGLENVVLLPHAASGTEETRKATADIVIENLE 191
V+ EE+ +++V L + A IE ++
Sbjct: 199 GVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQ 246
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 154
Score = 25.0 bits (54), Expect = 4.9
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 84 RSVGIIGLGRIGMAVA 99
+ V +IG G IG +
Sbjct: 8 KKVAMIGSGMIGGTMG 23
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 25.3 bits (54), Expect = 4.9
Identities = 6/33 (18%), Positives = 12/33 (36%)
Query: 86 VGIIGLGRIGMAVAKRAEAFGCFISYRSRAEKP 118
+ ++G G +G G + R +P
Sbjct: 3 ITVLGCGALGQLWLTALCKQGHEVQGWLRVPQP 35
>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}
Length = 166
Score = 25.3 bits (55), Expect = 5.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 86 VGIIGLGRIGMAVAKRA 102
VGI G GRIG V + A
Sbjct: 4 VGINGFGRIGRIVFRAA 20
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 25.1 bits (53), Expect = 5.2
Identities = 4/25 (16%), Positives = 9/25 (36%)
Query: 83 GRSVGIIGLGRIGMAVAKRAEAFGC 107
+ ++G G ++ A G
Sbjct: 4 SAKIALLGAGPASISCASFLARLGY 28
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 25.1 bits (54), Expect = 5.3
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 86 VGIIGLGRIGMAVA 99
+ ++G G IG +A
Sbjct: 6 IVLVGSGMIGGVMA 19
>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH)
{Streptococcus pyogenes [TaxId: 1314]}
Length = 196
Score = 25.3 bits (54), Expect = 5.5
Identities = 3/14 (21%), Positives = 9/14 (64%)
Query: 86 VGIIGLGRIGMAVA 99
+ + G G +G+++
Sbjct: 3 IAVAGSGYVGLSLG 16
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 25.0 bits (54), Expect = 5.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 84 RSVGIIGLGRIGMAVA 99
V IIG G +G + A
Sbjct: 2 SKVAIIGAGFVGASAA 17
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 25.0 bits (54), Expect = 5.7
Identities = 5/21 (23%), Positives = 12/21 (57%)
Query: 79 TKISGRSVGIIGLGRIGMAVA 99
+ + + V ++G G +G + A
Sbjct: 1 SMPNHQKVVLVGDGAVGSSYA 21
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC
{Thermotoga maritima [TaxId: 2336]}
Length = 89
Score = 24.1 bits (52), Expect = 6.0
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 88 IIGLGRIGM-AVAKRAEAFGCFISYRSRAEKPNTKYKGAL 126
+G+G IGM AVA + G + + E T Y L
Sbjct: 6 FVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKL 45
>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase,
HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 167
Score = 24.8 bits (53), Expect = 6.0
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 31 KCKEKGIQVTNTPDVLTDDVADAAIGLTLAVLRRFV--RSEDGE 72
G ++ P VL + V A + L V+ R+V ++ED E
Sbjct: 121 ISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTE 164
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 24.6 bits (53), Expect = 6.3
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 86 VGIIGLGRIGMAVA 99
+ +IG G +G +A
Sbjct: 4 LAVIGAGAVGSTLA 17
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 24.9 bits (53), Expect = 6.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 80 KISGRSVGIIGLGRIGMAVAKRAEAFGC 107
KI + V +IG G +G +A+ A A G
Sbjct: 1 KIIVKHVTVIGGGLMGAGIAQVAAATGH 28
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 24.6 bits (53), Expect = 6.8
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 86 VGIIGLGRIGMAVA 99
+G +G GR+G A
Sbjct: 3 LGFVGAGRVGSTSA 16
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter sp.,
py2 [TaxId: 35809]}
Length = 261
Score = 24.9 bits (53), Expect = 7.2
Identities = 6/20 (30%), Positives = 7/20 (35%)
Query: 88 IIGLGRIGMAVAKRAEAFGC 107
IG G G + A G
Sbjct: 47 FIGGGAAGRFGSAYLRAMGG 66
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit,
middle domain {Pseudomonas fragi [TaxId: 296]}
Length = 186
Score = 24.9 bits (53), Expect = 7.4
Identities = 5/24 (20%), Positives = 13/24 (54%)
Query: 84 RSVGIIGLGRIGMAVAKRAEAFGC 107
+ ++G G +G +A ++ + G
Sbjct: 5 KQAAVLGAGIMGGGIAYQSASKGT 28
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 24.9 bits (53), Expect = 7.8
Identities = 8/43 (18%), Positives = 15/43 (34%)
Query: 80 KISGRSVGIIGLGRIGMAVAKRAEAFGCFISYRSRAEKPNTKY 122
+ + +G + + A A G +S R KP+
Sbjct: 174 NTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHL 216
Score = 24.5 bits (52), Expect = 9.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 88 IIGLGRIGMAVAKRAEAFG 106
IG G G+A RA +G
Sbjct: 7 AIGGGSGGIASINRAAMYG 25
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 24.6 bits (52), Expect = 7.9
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 88 IIGLGRIGMAVAKRAEAFG 106
IIG G G A RA G
Sbjct: 10 IIGGGPGGYVAAIRAGQLG 28
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 24.3 bits (52), Expect = 8.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 86 VGIIGLGRIGMAVA 99
+GI+GLGR+G + A
Sbjct: 3 IGIVGLGRVGSSTA 16
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional
dehydrogenase/ferrochelatase Met8p, N-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 150
Score = 24.3 bits (52), Expect = 9.2
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 77 LTTKISGRSVGIIGLGRIGMAVAKRAEAFGCFI 109
L ++ + + +IG G +G+ + GC +
Sbjct: 7 LAHQLKDKRILLIGGGEVGLTRLYKLMPTGCKL 39
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.136 0.375
Gapped
Lambda K H
0.267 0.0470 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 718,969
Number of extensions: 31845
Number of successful extensions: 216
Number of sequences better than 10.0: 1
Number of HSP's gapped: 206
Number of HSP's successfully gapped: 104
Length of query: 204
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 123
Effective length of database: 1,295,466
Effective search space: 159342318
Effective search space used: 159342318
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.1 bits)