BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045525
MSTITSTVPELQEENAIPLTDFQSFHNIDREAYAKLVIQLGLDSDTSKKIVAFWNWLETK
GYSHFVHKSLQLTESSLPRLYGLALESILCLDCLANESFLQSGLDCDLPLMSRVCDRELS
LAFVLGNKQSANANVNIFLREVCDRAFIDYDLVLGNNLHNHQVQVLEPAAELLQPQVNIL
RQQGNGNHLANGQANDADTDRTLFATFSKGHPISRAELFEFFIRRYGEDCVEDIKMGCCR
DQSLYARVIVRSPAYITLILGENELKQFDIHGKDIRVRRFVPKPAPVASPSTSGN

High Scoring Gene Products

Symbol, full name Information P value
AT5G13620 protein from Arabidopsis thaliana 5.9e-25
AT3G45200 protein from Arabidopsis thaliana 7.0e-22
AT5G11220 protein from Arabidopsis thaliana 1.1e-18
AT1G64870 protein from Arabidopsis thaliana 5.3e-17
AT1G49290 protein from Arabidopsis thaliana 6.0e-17
AT5G24355 protein from Arabidopsis thaliana 3.3e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045525
        (295 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2173224 - symbol:AT5G13620 "AT5G13620" species...   284  5.9e-25   1
TAIR|locus:2096890 - symbol:AT3G45200 "AT3G45200" species...   255  7.0e-22   1
TAIR|locus:2147942 - symbol:AT5G11220 "AT5G11220" species...   156  1.1e-18   3
TAIR|locus:2010881 - symbol:AT1G64870 "AT1G64870" species...   213  5.3e-17   1
TAIR|locus:2010277 - symbol:AT1G49290 "AT1G49290" species...   147  6.0e-17   2
TAIR|locus:504954994 - symbol:AT5G24355 "AT5G24355" speci...   113  3.3e-06   1


>TAIR|locus:2173224 [details] [associations]
            symbol:AT5G13620 "AT5G13620" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB006704
            IPI:IPI00523001 RefSeq:NP_196866.1 UniGene:At.54837
            ProteinModelPortal:Q9FNB1 EnsemblPlants:AT5G13620.1 GeneID:831206
            KEGG:ath:AT5G13620 TAIR:At5g13620 eggNOG:NOG309605
            HOGENOM:HOG000090873 InParanoid:Q9FNB1 OMA:PAFEDIC PhylomeDB:Q9FNB1
            ProtClustDB:CLSN2682474 Genevestigator:Q9FNB1 Uniprot:Q9FNB1
        Length = 301

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 83/285 (29%), Positives = 151/285 (52%)

Query:    16 AIPLTDFQSFHNIDREAYAKLVIQLGLDSDTSKKIVAFWNWLETKGYSHFVHKSLQLTES 75
             A+   +F +FH  DR  + + V++L  D + S ++++F  +LE  G    +  +L +  +
Sbjct:     9 AVTRDEFNAFHKCDRALFRRFVVRLRRDINQSLQVMSFLLYLEKSG----LVSNLIVNFN 64

Query:    76 SLPRLY--GLALESILCLDCLANESFLQSGLDCD---LPLMSRVCDRELSLAFVLGNKQS 130
             SLP  +   +A E ++CL CL+ E+F     +     +PL++R+    L+LA +  N++S
Sbjct:    65 SLPDFFINTVADEVVMCLSCLSYENFSMFVANFGKKIIPLITRMTGEYLTLAVIHQNRES 124

Query:   131 ANANVNIFLREVCDRAFIDY------DLVLGNNLH---NHQVQVLEPAAELLQPQVNILR 181
                ++   L  +C  AF D       + V+ +  H   +  V     +++ L  Q    R
Sbjct:   125 ILLDMKKHLTSICYPAFEDICVQAEKEKVIEDMKHLGFSKAVHKAGSSSQFLSEQQATTR 184

Query:   182 QQGNGNHLANGQANDADTDRTLFATFSKGHPISRAELFEFFIRRYGEDCVEDIKM--GCC 239
                 G    + QA +   DRT+F TFS+G+P+S AE+  +F RR+GE  +E I M  G  
Sbjct:   185 TSKVGVFSEDEQARE--DDRTVFLTFSRGYPLSEAEVHAYFTRRFGE-IIEAIIMPGGEG 241

Query:   240 RDQSLYARVIVRSPAYITLILGEN-ELKQFDIHGKDIRVRRFVPK 283
              +Q+LYA++++ S A I  I+ +  E  ++ I+GK +  R+++P+
Sbjct:   242 NEQALYAKMVLHSAAMIPEIVSDGIERNKYTINGKHVWARKYIPR 286


>TAIR|locus:2096890 [details] [associations]
            symbol:AT3G45200 "AT3G45200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 EMBL:AL138649 ProtClustDB:CLSN2679345
            EMBL:DQ446735 IPI:IPI00519223 PIR:T47460 RefSeq:NP_190106.1
            UniGene:At.65244 PRIDE:Q9M1T9 EnsemblPlants:AT3G45200.1
            GeneID:823656 KEGG:ath:AT3G45200 TAIR:At3g45200 InParanoid:Q9M1T9
            OMA:CIATEND PhylomeDB:Q9M1T9 Genevestigator:Q9M1T9 Uniprot:Q9M1T9
        Length = 300

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 74/235 (31%), Positives = 118/235 (50%)

Query:    25 FHNIDREAYAKLVIQLGLDSDTSKKIVAFWNWLETKGYSHFVHKSLQLTESSLPRLYGLA 84
             FH  DRE ++KLV++       S  ++A W WLE  G+ +     L LT+   P + GLA
Sbjct:    12 FHAQDREIFSKLVLKFSRPPAESLLVMATWLWLEDFGFENIFSIILTLTD---PLIAGLA 68

Query:    85 LESILCLDCLANESFLQSGLDCDLPLMSRVCDRELSLAFVLGNKQSANANVNIFLREVCD 144
              E++ C  CL+    L +     +PL ++   + +SL  +  N+ SA   +  FL  VC 
Sbjct:    69 YEAVSCFQCLS----LNNPPIGRIPLTTKYLKKNISLQMIYKNRYSAITGIKNFLTTVCT 124

Query:   145 RAFIDYDL-VLG-NNLHNHQVQVLEPAA--ELLQP---QVNILRQQ------GNGNH--- 188
             R F D  L VL  +++ +   ++ +P        P    +N++  +       N N+   
Sbjct:   125 RIFTDILLRVLPPSSMSSFDARLRQPLQIPGFPHPIFGSINVMPNEVDRDNFSNKNNNLF 184

Query:   189 -LANG----QAN--DADTDRTLFATFSKGHPISRAELFEFFIRRYGEDCVEDIKM 236
              + NG     AN    + DRTLF TFS+G+P++ AE+ E F + YGE+CVE + M
Sbjct:   185 FIPNGLWGWNANCIATENDRTLFLTFSRGYPVTHAEIIELFTKEYGENCVEGVYM 239

 Score = 171 (65.3 bits), Expect = 7.2e-11, P = 7.2e-11
 Identities = 36/103 (34%), Positives = 58/103 (56%)

Query:   191 NGQANDADTDRTLFATFSKGHPISRAELFEFFIRRYGEDCVEDIKMG------------- 237
             N      + DRTLF TFS+G+P++ AE+ E F + YGE+CVE + M              
Sbjct:   194 NANCIATENDRTLFLTFSRGYPVTHAEIIELFTKEYGENCVEGVYMQHDNKRSFNANANR 253

Query:   238 CCRDQSLYARVIVRSPAYITLILGENELKQFDIHGKDIRVRRF 280
              C  QSL+AR+++ S   +  +L + + K+  I+GK+I  R++
Sbjct:   254 SCEQQSLFARLVLDSVTTVDRVLDDEQKKELMIYGKNIWARKY 296


>TAIR|locus:2147942 [details] [associations]
            symbol:AT5G11220 "AT5G11220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AL360314 IPI:IPI00538574
            RefSeq:NP_196683.1 UniGene:At.43617 ProteinModelPortal:Q9LFN4
            EnsemblPlants:AT5G11220.1 GeneID:830992 KEGG:ath:AT5G11220
            TAIR:At5g11220 HOGENOM:HOG000153012 InParanoid:Q9LFN4 OMA:HRYSAIA
            PhylomeDB:Q9LFN4 ProtClustDB:CLSN2679345 Genevestigator:Q9LFN4
            Uniprot:Q9LFN4
        Length = 265

 Score = 156 (60.0 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
 Identities = 37/103 (35%), Positives = 59/103 (57%)

Query:   191 NGQANDADTDRTLFATFSKGHPISRAELFEFFIRRYGEDCVEDIKM-----------GCC 239
             N      D +RT+F TFS+G P+S+AE+  FF + YGE+CVE + M           G  
Sbjct:   157 NASCIATDNERTMFITFSRGFPVSQAEVKRFFTKNYGENCVEGVYMKEDNKNFLNANGND 216

Query:   240 --RDQSLYARVIVRSPAYITLILGENELKQFDIHGKDIRVRRF 280
               + QSL+A++++ S A +  IL   ++K+F  +GK I  R++
Sbjct:   217 NGQQQSLFAKLVLNSVATVDRILDGEKIKRFKSNGKHIWARKY 259

 Score = 110 (43.8 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
 Identities = 31/99 (31%), Positives = 49/99 (49%)

Query:    51 VAFWNWLETKGYSHFVHKSLQLTESSLPRLYGLALESILCLDCLANESFLQSGLDCDLPL 110
             +A W WLE     + +   L L++   P +  LA E++LC  CL  +S  Q      +PL
Sbjct:     1 MATWFWLEDFFSQNILSTILALSD---PVIMALANEAVLCFQCL--DSAEQPNDFNQIPL 55

Query:   111 MSRVCDRELSLAFVLGNKQSANANVNIFLREVCDRAFID 149
              + +  +++SL     ++ SA A +  FL  VC R F D
Sbjct:    56 TAELLAKDISLQIFHKHRYSAIAGIRNFLTTVCSRIFSD 94

 Score = 41 (19.5 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
 Identities = 6/14 (42%), Positives = 13/14 (92%)

Query:   150 YDLVLGNNLHNHQV 163
             +D+V+G+NL+N+ +
Sbjct:   133 HDVVVGDNLYNNNL 146


>TAIR|locus:2010881 [details] [associations]
            symbol:AT1G64870 "AT1G64870" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AC006193 ProtClustDB:CLSN2679345
            EMBL:DQ446395 IPI:IPI00517656 PIR:A96672 RefSeq:NP_176667.1
            UniGene:At.66101 ProteinModelPortal:Q9XIQ9
            EnsemblPlants:AT1G64870.1 GeneID:842795 KEGG:ath:AT1G64870
            TAIR:At1g64870 InParanoid:Q9XIQ9 OMA:AKFRING PhylomeDB:Q9XIQ9
            Genevestigator:Q9XIQ9 Uniprot:Q9XIQ9
        Length = 304

 Score = 213 (80.0 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 73/234 (31%), Positives = 108/234 (46%)

Query:    24 SFHNIDREAYAKLVIQLGLDSDTSKKIVAFWNWLETKGYSHFVHKSLQLTESSLPRLYGL 83
             +FH  +RE ++KLV +L      S  ++A W W E  G+ +    S+    S L  +  L
Sbjct:    11 AFHAQEREIFSKLVQKLRRPPAESLLVMATWLWFEDFGFGNIF--SIITVFSDL-LIVDL 67

Query:    84 ALESILCLDCLANESFLQSGLDCD-LPLMSRVCDRELSLAFVLGNKQSANANVNIFLREV 142
             A E++LC  CL ++   Q   D   +PL  R    ++SL  +  ++ +A   +  FL  +
Sbjct:    68 ANEAVLCFRCLESD---QPPNDVSQIPLTERFMKNDISLQIIHNHRYTAITGIKNFLTTI 124

Query:   143 CDRAFIDY-DLVLGNNLHNHQVQVLEPAA--ELLQP---QVNIL-----RQQ-GNGN--- 187
             C R F D    VL ++  +    +  P        P    +N+L     R    N N   
Sbjct:   125 CSRIFSDILQRVLPSSSSSFITNLRHPLIIPGFPHPTFGSINVLPNIVARDNLPNANSFL 184

Query:   188 --H-LANGQANDADTD--RTLFATFSKGHPISRAELFEFFIRRYGEDCVEDIKM 236
               H L    AN   TD  RT+F TFS+G P+S AE+   F   YGEDCVE + M
Sbjct:   185 FPHGLWGWNANHVATDKERTVFLTFSRGFPVSHAEVIHLFTEIYGEDCVESVYM 238

 Score = 152 (58.6 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 39/110 (35%), Positives = 58/110 (52%)

Query:   185 NGNHLANGQANDADTDRTLFATFSKGHPISRAELFEFFIRRYGEDCVEDIKM-------- 236
             N NH+A       D +RT+F TFS+G P+S AE+   F   YGEDCVE + M        
Sbjct:   193 NANHVAT------DKERTVFLTFSRGFPVSHAEVIHLFTEIYGEDCVESVYMPEDGGNSS 246

Query:   237 ----GCC--RDQSLYARVIVRSPAYITLILGENELKQFDIHGKDIRVRRF 280
                  C   + Q L+A++++ S   +  IL   E +++ I+GK I  R+F
Sbjct:   247 NDNTNCNGHQQQPLFAKMVLDSVVTVDRILSGQEKQKYKINGKHIWARKF 296


>TAIR|locus:2010277 [details] [associations]
            symbol:AT1G49290 "AT1G49290" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009860 "pollen tube growth" evidence=RCA]
            [GO:0030048 "actin filament-based movement" evidence=RCA]
            EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007504
            HOGENOM:HOG000090873 ProtClustDB:CLSN2682474 EMBL:DQ459168
            IPI:IPI00544154 PIR:B96529 RefSeq:NP_175354.1 UniGene:At.65995
            ProteinModelPortal:Q9XI97 SMR:Q9XI97 PRIDE:Q9XI97
            EnsemblPlants:AT1G49290.1 GeneID:841352 KEGG:ath:AT1G49290
            TAIR:At1g49290 eggNOG:NOG259559 InParanoid:Q9XI97 OMA:EANEQPL
            PhylomeDB:Q9XI97 Genevestigator:Q9XI97 Uniprot:Q9XI97
        Length = 338

 Score = 147 (56.8 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
 Identities = 49/147 (33%), Positives = 75/147 (51%)

Query:   156 NNLHNHQVQVLEPAAELLQPQVN-----ILRQQGNGNHLANGQANDADTDRTLFATFSKG 210
             N L   QV++  P      P V       LR++             AD DRT+F TFSKG
Sbjct:   193 NRLSVQQVKIASPPPPRPHPPVEDETEKALREKETMEVKEKEGVLAAD-DRTVFLTFSKG 251

Query:   211 HPISRAELFEFFIRRYGEDCVEDIKMGC--CRDQSLYARVIVR--SPAYITLILGENELK 266
             +PIS AE+  +F RR+GE  +E ++M      +Q L+A+++++    + +  I+      
Sbjct:   252 YPISEAEVRVYFTRRFGE-VIEAVEMQEVEANEQPLFAKMVMKLQCASMMDEIVSARFRN 310

Query:   267 QFDIHGKDIRVRRFVPK-PAPVASPST 292
             +F I GK +  R++V K P P AS ST
Sbjct:   311 KFTIDGKHVWARKYVRKNPYP-ASSST 336

 Score = 124 (48.7 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
 Identities = 39/137 (28%), Positives = 64/137 (46%)

Query:    21 DFQSFHNIDREAYAKLVIQLGLDSDTSKKIVAFWNWLETKGYSHFVHKSLQLTESSLPRL 80
             +F +FH IDR  +++LV  L  D D S   + F  +LE   Y+  +   L     SLP  
Sbjct:    23 EFNAFHTIDRTLFSRLVFNLNRDVDQSFLAMCFLLFLEQSSYARDIIAYLV----SLPNA 78

Query:    81 Y--GLALESILCLDCLANESFLQSGLDCD------LPLMSRVCDRELSLAFVLGNKQSAN 132
             +   +A E  +C++ L N  F  +    D      +PL+ R+   + +L  +   +++  
Sbjct:    79 FVDAVANEIGVCINLLYNVEFASTFFAADNDDNSMIPLLLRITGGKFTLRLINQQRKNFC 138

Query:   133 ANVNIFLREVCDRAFID 149
             A V     +VC RAF D
Sbjct:   139 AGVTKSWTDVCTRAFSD 155


>TAIR|locus:504954994 [details] [associations]
            symbol:AT5G24355 "AT5G24355" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB016884
            IPI:IPI00520727 RefSeq:NP_680216.1 UniGene:At.65546
            EnsemblPlants:AT5G24355.1 GeneID:832506 KEGG:ath:AT5G24355
            TAIR:At5g24355 eggNOG:NOG311284 HOGENOM:HOG000131647 OMA:ANERTLY
            PhylomeDB:Q3E970 ProtClustDB:CLSN2917835 Genevestigator:Q3E970
            Uniprot:Q3E970
        Length = 113

 Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 30/93 (32%), Positives = 57/93 (61%)

Query:   192 GQANDADT-DRTLFATFSKGHPISRAELF-EFFIRRYGEDCVEDIKM--GCCRDQSLYAR 247
             G  + AD  +RTL+ TF +G P+S+ E+  + F  +YGE+CV+ I M     ++Q+L+A+
Sbjct:     8 GDNSIADANERTLYITFPRGVPMSQEEVIKQCFTEQYGENCVQGIDMQHDDGQEQALFAK 67

Query:   248 VIVRSPAYITLILGENE-LKQFDIHGKD-IRVR 278
             +++ S A +  +L   E +K + +   D +++R
Sbjct:    68 LVLDSVATMNRVLNHWETVKLWSLSENDSVKLR 100


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      295       295   0.00092  115 3  11 22  0.36    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  209 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.64u 0.12s 22.76t   Elapsed:  00:00:01
  Total cpu time:  22.64u 0.12s 22.76t   Elapsed:  00:00:01
  Start:  Thu May  9 16:34:43 2013   End:  Thu May  9 16:34:44 2013

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