BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045525
(295 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A8WSU9|PRO1_CAEBR Pre-rRNA-processing protein pro-1 OS=Caenorhabditis briggsae
GN=pro-1 PE=3 SV=1
Length = 532
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 17/168 (10%)
Query: 29 DREAYAKLVIQLGLDSDTSKKIVAFWNWLETKGYSHFVHKS-LQLTESSLPRLYGLALES 87
D + LV +L + +D + F W SH + S L++T S PR+ +
Sbjct: 159 DGAIHGYLVTEL-VSADRDSTVAPFRKW-----ASHTLAVSDLKITHGSNPRILTTGADH 212
Query: 88 ILCLDCLANESFLQSGLDCDLPLMSRVCDRELSLAFVLGNKQSANANVNIFLREVCDRAF 147
I CL ++ +S + D PL S D + F+ G + A +N+F +R
Sbjct: 213 IACLHSISMDSVILKA-SADRPLTSCAIDSAETRIFI-GTEVGNIAQINLFQLGAEERDL 270
Query: 148 IDYDLVLGNNLHNHQVQVLEPAAELLQPQVNILRQQGNGNHLANGQAN 195
L+ + HN + +VL ++ ++ L +G LA+G A+
Sbjct: 271 ----LIQAGDEHNTKFRVLNGHSD----EITRLTINTDGTLLASGDAS 310
>sp|Q65WM2|DTD_MANSM D-tyrosyl-tRNA(Tyr) deacylase OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=dtd PE=3 SV=1
Length = 144
Score = 34.7 bits (78), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 176 QVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRA-ELFEFFIRRYGE 228
++N+ QQ +G L Q ADT R L +FSKG P A EL+++F+++ GE
Sbjct: 61 KMNLNVQQTDGELLVVSQFTLAADTGRGLRPSFSKGAPPQLANELYQYFVQKCGE 115
>sp|B5XZI4|DTD_KLEP3 D-tyrosyl-tRNA(Tyr) deacylase OS=Klebsiella pneumoniae (strain 342)
GN=dtd PE=3 SV=1
Length = 145
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+E+F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGAAPDRAEALYEYFVAR 112
>sp|A6TG77|DTD_KLEP7 D-tyrosyl-tRNA(Tyr) deacylase OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=dtd PE=3
SV=1
Length = 145
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 15/76 (19%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRRYGEDCV 231
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+E+F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGAAPDRAEALYEYFVAR------ 112
Query: 232 EDIKMGCCRDQSLYAR 247
CR Q ++ +
Sbjct: 113 -------CRQQEMHTQ 121
>sp|A5UHF9|DTD_HAEIG D-tyrosyl-tRNA(Tyr) deacylase OS=Haemophilus influenzae (strain
PittGG) GN=dtd PE=3 SV=1
Length = 144
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 176 QVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRA-ELFEFFIRRYGE 228
++N+ QQ G L Q ADT + L +FSKG P + A EL+E+FI++ E
Sbjct: 61 KMNLNVQQAQGELLIVSQFTLAADTQKGLRPSFSKGAPPALANELYEYFIQKCAE 115
>sp|A4WGB6|DTD_ENT38 D-tyrosyl-tRNA(Tyr) deacylase OS=Enterobacter sp. (strain 638)
GN=dtd PE=3 SV=1
Length = 145
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 176 QVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
++N+ QQ G+ L Q ADTDR + FSKG RAE L+++F+ R
Sbjct: 61 KMNLNVQQAGGSVLVVSQFTLAADTDRGMRPGFSKGAAPDRAEALYDYFVER 112
>sp|B7NUY4|DTD_ECO7I D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=dtd PE=3 SV=1
Length = 145
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 173 LQPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
++ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 58 VEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|Q22006|PRO1_CAEEL Pre-rRNA-processing protein pro-1 OS=Caenorhabditis elegans
GN=pro-1 PE=2 SV=1
Length = 529
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 17/168 (10%)
Query: 29 DREAYAKLVIQLGLDSDTSKKIVAFWNWLETKGYSHFVHKS-LQLTESSLPRLYGLALES 87
D + LV L + +D + F W SH + S L++T S PR+ +
Sbjct: 159 DGAVHGYLVTDL-VSADRDHTVAPFRKWA-----SHTLSISDLKITNGSNPRVLSAGADH 212
Query: 88 ILCLDCLANESFLQSGLDCDLPLMSRVCDRELSLAFVLGNKQSANANVNIFLREVCDRAF 147
I CL ++ +S + D PL + D + F+ G + A +N+F +R
Sbjct: 213 IACLHSISMDSVILKA-SSDRPLTACAIDPAETRIFI-GTEVGNIAQINLFQLAPEERDL 270
Query: 148 IDYDLVLGNNLHNHQVQVLEPAAELLQPQVNILRQQGNGNHLANGQAN 195
LV + HN + +VL ++ +++ L +G LA+G A+
Sbjct: 271 ----LVQAGDEHNTKFRVLNGHSD----EISRLAINTDGTLLASGDAS 310
>sp|Q32A57|DTD_SHIDS D-tyrosyl-tRNA(Tyr) deacylase OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=dtd PE=3 SV=1
Length = 145
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|Q0SZ73|DTD_SHIF8 D-tyrosyl-tRNA(Tyr) deacylase OS=Shigella flexneri serotype 5b
(strain 8401) GN=dtd PE=3 SV=1
Length = 145
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|Q3YV89|DTD_SHISS D-tyrosyl-tRNA(Tyr) deacylase OS=Shigella sonnei (strain Ss046)
GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|P0A6M7|DTD_SHIFL D-tyrosyl-tRNA(Tyr) deacylase OS=Shigella flexneri GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|Q31UA6|DTD_SHIBS D-tyrosyl-tRNA(Tyr) deacylase OS=Shigella boydii serotype 4 (strain
Sb227) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B2TVN1|DTD_SHIB3 D-tyrosyl-tRNA(Tyr) deacylase OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B7LVG2|DTD_ESCF3 D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|Q1R431|DTD_ECOUT D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli (strain UTI89 /
UPEC) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B1LMS1|DTD_ECOSM D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B6I4M4|DTD_ECOSE D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli (strain SE11)
GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B7NFI6|DTD_ECOLU D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|P0A6M4|DTD_ECOLI D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli (strain K12)
GN=dtd PE=1 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B1IVJ1|DTD_ECOLC D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli (strain ATCC 8739
/ DSM 1576 / Crooks) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|P0A6M5|DTD_ECOL6 D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|Q0TAH5|DTD_ECOL5 D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|A1AI64|DTD_ECOK1 D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O1:K1 / APEC
GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|A8A6Y8|DTD_ECOHS D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O9:H4 (strain HS)
GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B1XB55|DTD_ECODH D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli (strain K12 /
DH10B) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|C5A055|DTD_ECOBW D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B7M686|DTD_ECO8A D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O8 (strain IAI1)
GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B5YZ24|DTD_ECO5E D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O157:H7 (strain
EC4115 / EHEC) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|P0A6M6|DTD_ECO57 D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O157:H7 GN=dtd
PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B7L9D6|DTD_ECO55 D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli (strain 55989 /
EAEC) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B7MI18|DTD_ECO45 D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O45:K1 (strain
S88 / ExPEC) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|B7UNK4|DTD_ECO27 D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|A7ZU92|DTD_ECO24 D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
+ ++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 59 EGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|A5UE61|DTD_HAEIE D-tyrosyl-tRNA(Tyr) deacylase OS=Haemophilus influenzae (strain
PittEE) GN=dtd PE=3 SV=1
Length = 144
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 176 QVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRA-ELFEFFIRR 225
++N+ QQ G L Q ADT + L +FSKG P + A EL+E+FI++
Sbjct: 61 KMNLNVQQAQGELLIVSQFTLAADTQKGLRPSFSKGAPPALANELYEYFIQK 112
>sp|C3MAJ1|RLMN_RHISN Dual-specificity RNA methyltransferase RlmN OS=Rhizobium sp.
(strain NGR234) GN=rlmN PE=3 SV=1
Length = 411
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 18 PLTDFQSFHNIDREAYAKLVIQLGLDSDTSK-KIVAFWNWLETKGYSHF 65
P T+ S + RE AKL+++ G+ K ++ W+WL +G S F
Sbjct: 22 PQTEKPSLIGLLREDMAKLLVEKGVPERQVKMRVSQLWHWLYVRGVSDF 70
>sp|B7N2M8|DTD_ECO81 D-tyrosyl-tRNA(Tyr) deacylase OS=Escherichia coli O81 (strain ED1a)
GN=dtd PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 176 QVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
++N+ QQ G+ L Q ADT+R + +FSKG RAE L+++F+ R
Sbjct: 61 KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVER 112
>sp|A7MQD6|DTD_CROS8 D-tyrosyl-tRNA(Tyr) deacylase OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=dtd PE=3 SV=1
Length = 145
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 174 QPQVNILRQQGNGNHLANGQAN-DADTDRTLFATFSKGHPISRAE-LFEFFIRR 225
Q ++N+ QQ G+ L Q ADT++ L +FS+G P +A+ L+++F+ R
Sbjct: 59 QGKMNLNVQQAGGSVLVVSQFTLPADTEKGLRPSFSRGAPPEQAQALYDYFVSR 112
>sp|P87154|DPOE_SCHPO DNA polymerase epsilon catalytic subunit A OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pol2 PE=2 SV=1
Length = 2199
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 14 ENAIPLTDFQSFHNIDREAYAKLVIQLGLDSDTSKKIVAFWNWLETKGYSHFVHKSLQL- 72
E+ + +D + N+D + Y +L++QL D S + N E + Y L+
Sbjct: 548 ESGVFRSDLPTNFNMDPKVYEELILQLDKALDFSLTVENNVNVDEIENYEEVRDSILKKL 607
Query: 73 -------TESSLPRLYGLALESI---------LCLDCLANESFLQSGLDCDLPLMSRVCD 116
S PR+Y L + S+ L D + +ESF + CDL + ++ CD
Sbjct: 608 SDLRDRPKRSEKPRIYHLDVASMYPNIMITNRLQPDSVKDESFCAT---CDLNVPNKTCD 664
Query: 117 RELSLAF 123
R + A+
Sbjct: 665 RRMVWAW 671
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,201,918
Number of Sequences: 539616
Number of extensions: 4301624
Number of successful extensions: 9539
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 9538
Number of HSP's gapped (non-prelim): 39
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)