BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045527
(258 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|387965727|gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 135/208 (64%), Gaps = 9/208 (4%)
Query: 43 PAHEGRGF---RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQA 99
P RGF R+LTE ELQ + GLC+KCDEK+ GH+CR++EL V+ +++ E +
Sbjct: 390 PPLSSRGFGEMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFMEDNEEDE-- 447
Query: 100 VEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASH 159
+E E PTE EVSLNSV+GL++PKT+KL+ I+N +VVV+ D GA+H
Sbjct: 448 LEGALSGSEAPPSPTEEIPP---EVSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATH 504
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQ-GVEIVEDFLPLDLG 218
NF+S + + L +P+T +E +GV L G A + GICR V L L G+ +VEDFLPL LG
Sbjct: 505 NFLSLKAIDKLGIPVTESEEFGVSLGDGQAVRGTGICRAVALYLDGGLVVVEDFLPLGLG 564
Query: 219 ITDIIMGIHWLKTLGATHINWKTHSMKF 246
+D+I+G+ WL+TLG NWKT M F
Sbjct: 565 NSDVILGVQWLETLGTVVSNWKTQKMSF 592
>gi|147854459|emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
Length = 2232
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 140/195 (71%), Gaps = 5/195 (2%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++LTE+ELQ+ +E GL +KC+EKFSPGHRC+K EL+V+L+ E E E +D +
Sbjct: 977 KRLTESELQARREKGLWFKCEEKFSPGHRCKK-ELRVLLVHEDEEE----DDNQFDDRAT 1031
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
+P VE+SLNSVVGLT+P T+K+ I +K+V++L DSGA+HNF+S E+V L
Sbjct: 1032 EEPALIELKDAVELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQL 1091
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLK 230
LP+T T YGV++ TG + K +GICRGV + +QG+ +VEDFLPL+LG TD+I+G+ WL
Sbjct: 1092 TLPLTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNTDVILGMPWLG 1151
Query: 231 TLGATHINWKTHSMK 245
TLG +NWK +MK
Sbjct: 1152 TLGDVKVNWKMLTMK 1166
>gi|261865347|gb|ACY01928.1| hypothetical protein [Beta vulgaris]
Length = 1583
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 136/204 (66%), Gaps = 10/204 (4%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
R+L+E ELQ +E GLC++CDEK++ GHRC+K+EL ++L + E+ G E
Sbjct: 335 RRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILL-----GHEEEEEEYGSLME-N 388
Query: 111 SKPTEGAKNQV----VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
+P +Q+ E+SLNSV+G++SPKTLK+ I +KV+V+ D GA+HNFIS +
Sbjct: 389 IQPAHPDDSQLEIHSPEISLNSVMGISSPKTLKMEGTIYGQKVIVMVDPGATHNFISLDT 448
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
V L++PI+++ P+GV L TG+ QG C+ V L LQGV ++ED+LPL LG +D+I+G+
Sbjct: 449 VRRLQIPISSSRPFGVSLGTGAEAHGQGECKAVPLHLQGVCVMEDYLPLTLGNSDLILGV 508
Query: 227 HWLKTLGATHINWKTHSMKFNTRN 250
WL+ LG NWKT ++++ N
Sbjct: 509 QWLEKLGTMVTNWKTQTLQYKEGN 532
>gi|449472371|ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
sativus]
Length = 764
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 133/199 (66%), Gaps = 3/199 (1%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L +AE Q+ +E GLC++C+EK+ GHRC+ ++EL++ +++E E E E
Sbjct: 327 KRLPDAEFQARKEKGLCFRCNEKYFHGHRCKGREQRELRMYVVKEDEEYEIVEEAEWDET 386
Query: 108 ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
EL +VE+S+NSVVGLT+P T+K+ +I +++V++L D GA+HNFIS++VV
Sbjct: 387 ELNCVEINPEDQAIVELSINSVVGLTNPGTMKVRGKIKDREVIILIDCGATHNFISDKVV 446
Query: 168 LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
L LP T YGVIL +G+A K +GIC G+ L L+G ++ +FLPL+LG D ++G+
Sbjct: 447 QELSLPTKTTSHYGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVLGMQ 506
Query: 228 WLKTLGATHINWKTHSMKF 246
WL +LG T ++WK +M F
Sbjct: 507 WLYSLGVTEVDWKNLTMTF 525
>gi|449465222|ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
Length = 2712
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 133/199 (66%), Gaps = 3/199 (1%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L +AE Q+ +E GLC++C+EK+ GHRC+ ++EL++ +++E E E E
Sbjct: 1240 KRLPDAEFQAQKEKGLCFRCNEKYFHGHRCKGREQRELRMYVVKEDEEYEIVEEAEWDET 1299
Query: 108 ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
EL +VE+S+NSVVGLT+PKT+K+ +I +++V++L D GA+HNFIS++VV
Sbjct: 1300 ELNCVEINPEDQAIVELSINSVVGLTNPKTMKVRGKIKDREVIILIDCGATHNFISDKVV 1359
Query: 168 LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
L LP T YGVIL +G+A K +GIC G+ L L+G ++ +FLPL+LG D ++ +
Sbjct: 1360 QELSLPTKTTSHYGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVLEMQ 1419
Query: 228 WLKTLGATHINWKTHSMKF 246
WL +LG T ++WK +M F
Sbjct: 1420 WLYSLGVTEVDWKNLTMTF 1438
>gi|449457325|ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219499 [Cucumis sativus]
Length = 718
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 137/202 (67%), Gaps = 9/202 (4%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L +AE Q+ +E GLC++C+EK+ GHRCR ++EL++ +++E E E E
Sbjct: 300 KRLPDAEFQARKEKGLCFRCNEKYFHGHRCRGREQRELRMYVVKEDEEYEIVEEAEWDET 359
Query: 108 E---LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISN 164
E +E P + A +VE+S+NSVVGLT+P T+K+ +I +++V++L D GA+HNFIS+
Sbjct: 360 ESNCVEINPEDQA---IVELSINSVVGLTNPGTMKVRGKIKDREVIILIDCGATHNFISD 416
Query: 165 EVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIM 224
+VV L LP T YGVIL +G+A K +GIC G+ L L+G ++ +FLPL+LG D ++
Sbjct: 417 KVVQELSLPTKTTSHYGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVL 476
Query: 225 GIHWLKTLGATHINWKTHSMKF 246
G+ WL +LG T ++WK +M F
Sbjct: 477 GMQWLYSLGVTEVDWKNLTMTF 498
>gi|307136175|gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
Length = 1185
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 133/201 (66%), Gaps = 7/201 (3%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
+R+ +++LQ+ +E GLCY+CD+ FS GHRC+ +EL++ ++ + + + E+ +
Sbjct: 289 YRRWIDSKLQARKEKGLCYRCDKPFSKGHRCKNRELKLCVVADDLIDTEMSEEDNDGGMV 348
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
E P +VE+SL+SVVGLT+P T K+ ++ +++VVV+ D GA+HNFIS +V
Sbjct: 349 EIGP-------IVELSLSSVVGLTAPGTSKIKGKVEDREVVVMIDCGATHNFISLRLVEE 401
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+++ T T YGVI+ +G A + +G+C GV + L G+ +VEDFLPL+LG D+++G+ WL
Sbjct: 402 MQIATTETTQYGVIMGSGKAVQGKGMCTGVVVGLPGLTVVEDFLPLELGHLDMVLGMQWL 461
Query: 230 KTLGATHINWKTHSMKFNTRN 250
GA ++W+ +M F R+
Sbjct: 462 PKQGAMTVDWRNLAMTFAVRD 482
>gi|449470598|ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
Length = 1049
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 134/215 (62%), Gaps = 18/215 (8%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L++AE ++ + GLC+KC+E++SPGHRC+ K+EL + ++ E E+ +ED ++R
Sbjct: 280 KRLSDAEFRARLDKGLCFKCNERYSPGHRCKMKDKRELMLFIMNEEES----LED--EDR 333
Query: 108 ELESKPTEGAKNQVV-----EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFI 162
E+ NQ+ E+ L ++ GLTS T+K+ EI K+V++L DSGA+HNFI
Sbjct: 334 TEETNEEVLELNQLTLEEGTEIELKAIHGLTSKGTMKIKGEIKGKEVLILIDSGATHNFI 393
Query: 163 SNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDI 222
N++V + L + N P+GV + G+ + +G+C + L L+ + IV DFL ++LG D+
Sbjct: 394 HNKIVEEVGLELENHTPFGVTIGDGTRCQGRGVCNRLELKLKEITIVADFLAIELGSVDV 453
Query: 223 IMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQF 257
I+G+ WL T G I+W + +M F +GK QF
Sbjct: 454 ILGMQWLNTTGTMKIHWPSLTMTFR----MGKKQF 484
>gi|449473450|ref|XP_004153884.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
Length = 564
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 134/216 (62%), Gaps = 18/216 (8%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L++AE ++ + GLC+KC+E++SPGHRC+ K+EL + ++ E E+ +ED ++R
Sbjct: 145 KRLSDAEFRARLDKGLCFKCNERYSPGHRCKMKDKRELMLFIMNEEES----LED--EDR 198
Query: 108 ELESKPTEGAKNQVV-----EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFI 162
E+ NQ+ E+ L ++ GLTS T+K+ EI K+V++L DSGA+HNFI
Sbjct: 199 TEETNEEVLELNQLTLEEGTEIELKAIHGLTSKGTMKIKGEIKGKEVLILIDSGATHNFI 258
Query: 163 SNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDI 222
N++V + L + N P+GV + G+ + +G+C + L L+ + IV DFL ++LG D+
Sbjct: 259 HNKIVEEVGLELENHTPFGVTIGDGTRCQGRGVCNRLELKLKEITIVADFLAIELGSVDV 318
Query: 223 IMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQFF 258
I+G+ WL T G I+W + +M F +GK QF
Sbjct: 319 ILGMQWLNTTGTMKIHWPSLTMTFR----MGKKQFI 350
>gi|449523988|ref|XP_004169005.1| PREDICTED: uncharacterized protein LOC101225033 [Cucumis sativus]
Length = 307
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 130/192 (67%), Gaps = 6/192 (3%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVG--Q 105
R+L++AE QS +E GLC+ C+EK+S H+C+ ++EL+++L+ + E E +E+ G +
Sbjct: 87 RRLSDAEFQSRREKGLCFLCNEKYSHDHKCKAKEQRELRMILVTK-EGEEFNIEEGGGNE 145
Query: 106 ERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNE 165
+ EL + + VVE+S+NSVVGL++P+T+K+ + K+V++L D GA+HN IS +
Sbjct: 146 QSELNTIEVVEESHAVVELSINSVVGLSNPRTMKVNGWLQGKEVIILVDRGATHNLISEK 205
Query: 166 VVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMG 225
+V L+L +T Y VIL +G+ K +G+C V L++ ++++FLPL+LG D+I+G
Sbjct: 206 LVKELQLNTKDTSNYAVILGSGTTIKGKGVCEAVELMIGDWRVIDEFLPLELGGVDVILG 265
Query: 226 IHWLKTLGATHI 237
+ WL +LG T +
Sbjct: 266 MQWLYSLGITEV 277
>gi|359372828|gb|AEV42261.1| hypothetical protein [Beta vulgaris]
Length = 1396
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 123/195 (63%), Gaps = 8/195 (4%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLL--QEYEAEAQAVEDVGQERE 108
R+L+E ELQ +E GLC++CD+K+S GHRC+K EL V+L ++ E E +E+ Q
Sbjct: 292 RRLSEKELQHKRERGLCFRCDDKWSVGHRCKK-ELSVLLSCKEDEEIEYGELENAPQPEI 350
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
+ E N E+SLNSV+G ++PKTLKL I + V+V+ D GA+HNF+S V
Sbjct: 351 PNTHIAETFVNP--EISLNSVMGFSNPKTLKLRGTIYGEAVIVMIDPGATHNFVSIHTVE 408
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFL-PLDLGITDIIMGIH 227
L +P+++ + + V L TG + G C V L++QGV +E+FL P LG +D+IMGI
Sbjct: 409 RLNIPVSHAKGFEVSLGTGQEVRGTGECLAVPLMVQGV--MENFLPPPPLGNSDVIMGIQ 466
Query: 228 WLKTLGATHINWKTH 242
WL+ LG NWKTH
Sbjct: 467 WLEKLGTMVTNWKTH 481
>gi|449464816|ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220785 [Cucumis sativus]
Length = 2047
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 118/185 (63%), Gaps = 10/185 (5%)
Query: 45 HEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVG 104
HE FR+ T+ ELQ+ + GLCY+CDE FS G RC+ +EL++ L+ + E +EDV
Sbjct: 680 HEN-NFRRWTDFELQARCDKGLCYRCDEPFSKGQRCKNKELRLYLVAN-DLEDTKMEDVE 737
Query: 105 QEREL-ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFIS 163
E + E P VVE+SLNSVVGLT+P T K+ + +++++++ D GA+HNFIS
Sbjct: 738 NENAMVEVSP-------VVELSLNSVVGLTAPSTFKVKGTVEDREIIIMVDCGATHNFIS 790
Query: 164 NEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
V LKLP+ T Y VI+ + A + +G+C+G+ + L + I+EDFLPL+LG D++
Sbjct: 791 LMRVEKLKLPMAETTNYDVIMGSRKAVQGRGMCKGITVGLPVLTIIEDFLPLELGNLDMV 850
Query: 224 MGIHW 228
+ W
Sbjct: 851 LVKTW 855
>gi|449511951|ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232566 [Cucumis sativus]
Length = 707
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 132/200 (66%), Gaps = 4/200 (2%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQ----VVLLQEYEAEAQAVEDVGQE 106
++L++AE QS +E GLC++C+EK+S H+C+ +E + +V++ E E E+ ++
Sbjct: 320 KRLSDAEFQSRKEKGLCFRCNEKYSHDHKCKMKEQRELRMLVVMGENEEYEIIEEEEVEQ 379
Query: 107 RELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
+EL ++ VVE+S+NSVVGL++P+T+K+ ++ ++++VL D A+HNFI +
Sbjct: 380 KELSVAEVIQEEHAVVELSINSVVGLSNPRTMKVKGKLLGRQIIVLIDCEATHNFIREGL 439
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
V L++ +T YGVIL +G+A K +G+C + +++ +++DFLPL+LG D I+G+
Sbjct: 440 VEELQISTKSTTNYGVILGSGTAIKGKGVCEAIEMMIGEWRVIDDFLPLELGGVDAILGM 499
Query: 227 HWLKTLGATHINWKTHSMKF 246
WL +LG T ++WK + F
Sbjct: 500 QWLYSLGITEVDWKNLILTF 519
>gi|147799941|emb|CAN70500.1| hypothetical protein VITISV_020483 [Vitis vinifera]
Length = 672
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 115/178 (64%), Gaps = 10/178 (5%)
Query: 69 KCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNS 128
+CD++FSPGHRC+K EL+V+ + E E + Q D G E K VE+SLN
Sbjct: 86 RCDKEFSPGHRCKK-ELRVLPVHENEEDNQF--DSGATPLTELK-------DAVELSLNX 135
Query: 129 VVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGS 188
+VGLT+ +T+K+ I + + ++L D G +H+F+ ++V L LP+T T YGV++ G
Sbjct: 136 MVGLTTSRTMKIKGTIGSNEXIILVDYGVTHDFLFLDLVQRLALPLTTTTSYGVVMGIGI 195
Query: 189 ATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
+ K + IC+GV + +QG+ +VEDF+PL+LG TD+I+G+ WL TLG +NW ++K
Sbjct: 196 SMKGKSICKGVCISMQGLIVVEDFVPLELGSTDVILGMPWLGTLGDVEVNWNMLTIKI 253
>gi|449501536|ref|XP_004161395.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 740
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 119/198 (60%), Gaps = 2/198 (1%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLL--QEYEAEAQAVEDVGQERE 108
++L++AE +S + GLC+KC+EK+S GHRCR +E + ++L E + + + E
Sbjct: 245 KRLSDAEFRSRLDKGLCFKCNEKYSSGHRCRMKEKRELMLFIMNEEEGNEEENMIKENTE 304
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
+ N+ E+ LN++ GLTS T+KL EI ++VVVL DSGA+HNF+ +++
Sbjct: 305 AVLELNNLDLNKKKEIELNTITGLTSKGTMKLRGEIEGREVVVLIDSGATHNFVHYKIIE 364
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
+K+P + + G+ K +G+C+ + + LQG+ +V DFL ++LG D I+G+ W
Sbjct: 365 EMKIPSEADTTFAATIGDGTCCKGRGLCKRLEVKLQGITVVADFLLIELGNVDAILGMQW 424
Query: 229 LKTLGATHINWKTHSMKF 246
L T G I+W + +M F
Sbjct: 425 LDTTGTMKIHWPSLTMSF 442
>gi|449496938|ref|XP_004160268.1| PREDICTED: uncharacterized protein LOC101232747 [Cucumis sativus]
Length = 701
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 127/206 (61%), Gaps = 10/206 (4%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQE---YEAEAQAVEDV 103
++L++ E ++ + GLC++C+EK+SPGHRC+ K+EL +++L E +E E+ ++
Sbjct: 212 IKRLSDTEFRARLDKGLCFRCNEKYSPGHRCKGREKRELMLLILNEEEDHERESNTEDEA 271
Query: 104 GQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFIS 163
+ EL + N+ + L + G+TS T+KL +N K+VV+L DSGA++NFIS
Sbjct: 272 SEIIEL----NQLELNEDTPIELRLITGVTSKGTMKLKGHVNGKEVVILIDSGATNNFIS 327
Query: 164 NEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
+V L+L I +GV + G+ + +GIC+ V + L+ + IV DFL ++LG D++
Sbjct: 328 QVLVDELQLSIDPGTRFGVNIGNGTRCEGRGICKRVKVKLKELTIVADFLAVELGKVDLV 387
Query: 224 MGIHWLKTLGATHINWKTHSMKFNTR 249
+G+ WL + G ++W + +M F T+
Sbjct: 388 LGMQWLDSTGTMKVHWPSLTMTFWTK 413
>gi|449502909|ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232599 [Cucumis sativus]
Length = 446
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 114/170 (67%), Gaps = 4/170 (2%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQE---- 106
++L++AE Q+ +E GLC+KCDEK+ GH+C+ +E++ + + A+ E + ++
Sbjct: 274 KQLSDAEFQAKREKGLCFKCDEKYYSGHKCKAKEIRELRMFVVRADDVEEEIIEEDEYDL 333
Query: 107 RELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
+ L++ + +VVE+ +NSVVGLT+P T+K+ I +K+VVVL D GA+HNFIS+ +
Sbjct: 334 KGLKTMELQNDLGEVVELCINSVVGLTNPGTMKIRGTIQSKEVVVLVDCGATHNFISDRL 393
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLD 216
V+ LKLP +T YGVIL +G+ K + +C V L L G ++E+FLPLD
Sbjct: 394 VMTLKLPSKDTSNYGVILGSGTTIKGKRVCEKVELDLNGWTVMENFLPLD 443
>gi|449526327|ref|XP_004170165.1| PREDICTED: uncharacterized protein LOC101232744 [Cucumis sativus]
Length = 426
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 77 GHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPK 136
GH+C+ +EL+ + + + + ED ++ EL++ +G VVE+ +NS+VGLT+
Sbjct: 94 GHKCKAKELRELWMFVVKTD-DIEEDEYEQSELKAMELQGEIGGVVELCINSMVGLTNLG 152
Query: 137 TLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGIC 196
T+K+ I K+V+VL D GA+HNFIS+++V+ L +P +T YG IL +G+ K +G+C
Sbjct: 153 TMKIRGVIEGKEVIVLVDCGATHNFISDKLVMTLHIPTKDTSNYGEILGSGTTIKGKGVC 212
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRN 250
V L L G + DFLPL+LG D+I+G+ WL +LG T ++WK M F N
Sbjct: 213 EQVKLSLNGWTVTADFLPLELGGVDMILGMQWLYSLGVTEVDWKNLVMSFVHNN 266
>gi|449449136|ref|XP_004142321.1| PREDICTED: uncharacterized protein LOC101219643 [Cucumis sativus]
Length = 648
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 127/206 (61%), Gaps = 16/206 (7%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQE 106
++L++ E ++ + GLC++C+EK++PGHRC+ K+EL +++L E E D +E
Sbjct: 295 IKRLSDTEFRARLDKGLCFRCNEKYAPGHRCKGREKRELMLLILNEEE-------DHKRE 347
Query: 107 RELESKPTEGAKNQVVEVSLNS------VVGLTSPKTLKLASEINNKKVVVLTDSGASHN 160
+ E + +E + +E+++++ + G+TS T+KL +N ++VV+L DSGA++N
Sbjct: 348 EDTEDEASEVIELNHLELNMDNPIELRLITGVTSKGTMKLKGHVNGREVVILIDSGATNN 407
Query: 161 FISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT 220
FIS +V L+L I +GV + G+ + GIC+ V + L+ + IV DFL ++LG
Sbjct: 408 FISQVLVDELQLSIDPGTRFGVTIGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTV 467
Query: 221 DIIMGIHWLKTLGATHINWKTHSMKF 246
D+++G+ WL + G ++W + +M F
Sbjct: 468 DLVLGMQWLDSTGTMKVHWPSLTMTF 493
>gi|359479937|ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257206 [Vitis vinifera]
Length = 787
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 6/212 (2%)
Query: 39 VQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQ 98
+V PA + + L+ E+Q + GLC+ C+E+F+ GHRC+K Q++LL+ +E
Sbjct: 231 TRVDPAIPAKPIKSLSWEEMQRKRAQGLCFNCNERFTAGHRCQKP--QLLLLKGHEGNVD 288
Query: 99 AVEDVGQERELESKPTEGAKNQ----VVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTD 154
Q+ + E A+ Q +E++L+++ G T+PKT+++ +++ +V+VL D
Sbjct: 289 CGNGTDQQTWEDDHGGEAAEVQEHEPKLEITLHALTGWTAPKTMRVTAKMGPHEVMVLID 348
Query: 155 SGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLP 214
SG++HNFISN + L+LP+ TE + V + G K QG V + LQG E
Sbjct: 349 SGSTHNFISNRLANKLRLPVIPTETFPVWVANGERLKCQGRYDKVRVELQGTEFYLTLFS 408
Query: 215 LDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
L L D+++G+ WL+ LG+ NWK +M F
Sbjct: 409 LPLSGLDLVLGVQWLEMLGSVVCNWKQLTMDF 440
>gi|147784790|emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera]
Length = 793
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 124/208 (59%), Gaps = 11/208 (5%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++LT E+Q + GLC+ CD+KF+ GH+CR LQ++LL+E + +E +++
Sbjct: 224 KRLTWEEMQKRRAQGLCFNCDDKFTVGHKCRG--LQLLLLEENSSP-------NKEDDID 274
Query: 111 SKPTEGAKNQVVE--VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
+ E A N+ +E +S +++ G ++PKT+++ ++I +VVVL DSG++HNFIS +V
Sbjct: 275 EEIEEPAINEQIEPEISFHALTGWSTPKTMRITAKIGQHEVVVLIDSGSTHNFISEKVAD 334
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
+L LP+ T+P+ V + G+ K QG V +ILQG+ L L D+++G+ W
Sbjct: 335 MLHLPVVPTKPFTVKVVNGTPLKCQGRFEHVHVILQGIPFSLTLYSLPLTGLDLVLGVQW 394
Query: 229 LKTLGATHINWKTHSMKFNTRNTIGKNQ 256
L+ LG NWK +M+F N K Q
Sbjct: 395 LEQLGTVVCNWKKLTMEFQWENQTHKLQ 422
>gi|147842329|emb|CAN76208.1| hypothetical protein VITISV_041623 [Vitis vinifera]
Length = 522
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 114/200 (57%), Gaps = 26/200 (13%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++L+ E+Q + GLC+ CDEKF+ GHRC++ + + EAE +L
Sbjct: 259 KRLSWEEMQKRRAQGLCFNCDEKFTSGHRCKEGDTK-------EAET----------DLP 301
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
S P E+SL++++G T+ KT+++ ++I VVVL DSG++HNFIS++VV +L
Sbjct: 302 SDP---------EISLHALIGWTTTKTMRVTAKIGTHDVVVLIDSGSTHNFISDKVVALL 352
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLK 230
LP+ T P+ V + G K QG + ++LQG+ F L L D+++G+ WL+
Sbjct: 353 HLPVVPTAPFHVRVANGQPLKCQGRFDNIHILLQGIPFSITFYSLPLNGLDLVLGVQWLE 412
Query: 231 TLGATHINWKTHSMKFNTRN 250
LG+ +WK +M+F N
Sbjct: 413 QLGSVVCDWKQMTMEFQWAN 432
>gi|449470397|ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208187 [Cucumis sativus]
Length = 1969
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 39/197 (19%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
FR+ T++ELQ+ ++ LCY+CDE FS GHRC+ +EL++ L+ A +ED E ++
Sbjct: 857 FRRWTDSELQARRDKDLCYRCDEPFSEGHRCKNKELRLYLV------ADDLEDTVME-DI 909
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
E+K T+ + VVE+S+NSVVGL +P+
Sbjct: 910 ENKGTKVEVSPVVELSVNSVVGLMAPEE-------------------------------- 937
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
L +P T YG+I+ +G A + +G+C+G + L + IVEDFLPL+LG D+++G+ WL
Sbjct: 938 LNIPTAETTSYGIIMGSGKAVQGKGMCKGATVGLPVLTIVEDFLPLELGNLDMVLGMMWL 997
Query: 230 KTLGATHINWKTHSMKF 246
+ GA ++WK +M F
Sbjct: 998 RKQGAMTVDWKELAMTF 1014
>gi|449475049|ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211870, partial [Cucumis
sativus]
Length = 674
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 107/164 (65%), Gaps = 8/164 (4%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVE------ 101
R ++L++ E Q+ +E GLC+KCDEK+ GH+C+ +E++ LQ + A VE
Sbjct: 66 RPSKRLSDVEFQAKREKGLCFKCDEKYYSGHKCKAKEIRE--LQMFVIRADNVEEEIIEE 123
Query: 102 DVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNF 161
DV ++REL + + VVE+ +NSVVGLT+P +K+ +I ++V+VL D GA+HNF
Sbjct: 124 DVYEQRELCTMELKSEIEGVVELCINSVVGLTNPGAMKVRGKIQGREVIVLIDCGATHNF 183
Query: 162 ISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQG 205
IS+++VL+LKL +T YGVI +G+A K +GIC V + L G
Sbjct: 184 ISDKLVLMLKLNTKDTSNYGVIFGSGTAIKGRGICEKVEVDLDG 227
>gi|227438239|gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2726
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 4/197 (2%)
Query: 51 RKLTEAELQSNQECGLCYKCDEK-FSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
+K T EL ++ +C+KC K ++ H+C ++++V+ + + VED QE +
Sbjct: 1501 KKYTNEELDRMRKEFICFKCGAKGWTRAHKCPNKDVRVMTTLN-GLQMEVVED--QEDDG 1557
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
E E ++ +SLNS +G+ SPKT KL +I V+V+ DSGASHNFI+ +V
Sbjct: 1558 EEFFFEAQMQELCTLSLNSYLGVGSPKTTKLYGKIQKTDVIVMLDSGASHNFITPSIVTK 1617
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
LKL + + ++L G++ + G+CR V L DF+ L+LG+ D+I+GI WL
Sbjct: 1618 LKLKVCAETSFDILLGNGASVNSLGVCREVSFQLADATFTSDFIALELGMVDVILGIQWL 1677
Query: 230 KTLGATHINWKTHSMKF 246
+TLG ++WK + F
Sbjct: 1678 ETLGRCEVDWKEQELSF 1694
>gi|449530792|ref|XP_004172376.1| PREDICTED: uncharacterized protein LOC101223371 [Cucumis sativus]
Length = 943
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 120/200 (60%), Gaps = 19/200 (9%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQ----VVLLQEYEAEAQAVEDVGQE 106
++L++AE QS +E GLC++C+EK+S H+C+ +E + +V++ E E E+ ++
Sbjct: 326 KRLSDAEFQSRKEKGLCFRCNEKYSHDHKCKTKEQRELHMLVVMGENEEYEIIEEEDIEQ 385
Query: 107 RELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
+EL + + VVE+S+NSVVGL++P T+K+A +NFIS +
Sbjct: 386 KELNAVEVVQEEQTVVELSINSVVGLSNPGTMKIAE---------------PYNFISESL 430
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
V L + +T YGVIL +G+A K + +C + ++L +V+DFLPL+LG D I+G+
Sbjct: 431 VEELHINTKSTTNYGVILGSGTAIKGKRVCEAIEMVLGKWRVVDDFLPLELGGVDAILGM 490
Query: 227 HWLKTLGATHINWKTHSMKF 246
WL +LG T ++WK + F
Sbjct: 491 QWLYSLGITEVDWKNLILTF 510
>gi|449504804|ref|XP_004162299.1| PREDICTED: uncharacterized protein LOC101228789 [Cucumis sativus]
Length = 250
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 86/120 (71%)
Query: 121 VVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPY 180
VVE+ + SVVGLT+ T+K+ EI K+V+VL D GA+HNFIS+++V L+LP +T Y
Sbjct: 10 VVELCIKSVVGLTNVGTMKIRGEIQGKEVIVLVDCGATHNFISDKLVATLQLPTKDTSNY 69
Query: 181 GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
GVIL +G+A K +G+C V L L G I DFLPL+LG D+I+G+ WL +LG T ++WK
Sbjct: 70 GVILGSGTAIKGKGVCEQVKLNLNGWMITTDFLPLELGGVDVILGMQWLYSLGVTEVDWK 129
>gi|147860462|emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
Length = 1384
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 115/207 (55%), Gaps = 7/207 (3%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
++LT E+Q + GLC+ CD+KF+ GH+CR +L ++ E + + + +
Sbjct: 331 MKRLTWEEMQKRRAQGLCFNCDDKFTVGHKCRGPQLLLL-------EGNSSPNKEDDIDE 383
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
E + + E+ +++ G ++PKT+++ ++I +VVVL DSG++HNFIS +VV +
Sbjct: 384 EIEEPAINEQTEPEIFFHALTGWSTPKTMRITTKIGQHEVVVLIDSGSTHNFISEKVVDM 443
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
L LP T+P+ V + G+ K QG V +ILQG+ L L D+++G+ WL
Sbjct: 444 LHLPXVPTDPFTVKVANGTPLKCQGRFEHVHVILQGIPFSLTLYSLPLTGLDLVLGVQWL 503
Query: 230 KTLGATHINWKTHSMKFNTRNTIGKNQ 256
+ LG NWK +M+F N K Q
Sbjct: 504 EQLGTIVCNWKKLTMEFQWZNQTHKLQ 530
>gi|147841216|emb|CAN64356.1| hypothetical protein VITISV_020633 [Vitis vinifera]
Length = 1852
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 117/200 (58%), Gaps = 11/200 (5%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++L E+Q + GLC+ C+E+F+PGH+C+ L LL E E Q ++E E
Sbjct: 192 KRLGWEEMQKRRAQGLCFNCNERFTPGHKCQGPRL---LLIEGHDEVQ-------DKEEE 241
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
+ ++ ++++ EVS++++ G SP+T+++A+ I ++ ++VL DSG++HNF+S++V L
Sbjct: 242 AXISDNREDEL-EVSIHALXGWASPRTMRVAATIKSQPIMVLIDSGSTHNFLSDKVARTL 300
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLK 230
+LP+ T+ + V + G QG V + LQG+ L L D+++GI WL
Sbjct: 301 RLPVVPTKSFTVHVANGERLLCQGRFEKVPIDLQGIPFSLTCYSLPLAGLDMVLGIQWLX 360
Query: 231 TLGATHINWKTHSMKFNTRN 250
LG+ NW+ +M FN N
Sbjct: 361 MLGSVVCNWQYLTMDFNWEN 380
>gi|147860532|emb|CAN81876.1| hypothetical protein VITISV_034528 [Vitis vinifera]
Length = 1241
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 115/207 (55%), Gaps = 7/207 (3%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
++LT E+Q + GL + CD+KF+ GH+CR +L ++ E ++ + + +
Sbjct: 255 MKRLTWEEMQKRRAXGLXFNCDDKFTXGHKCRGPQLLLL-------EGNSIPNKEDDIDE 307
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
E + + E+S +++ G ++PKT+++ ++I KVVVL DSG++HNFIS +V +
Sbjct: 308 EIEEPAINEQTKPEISFHALTGWSTPKTMRITAKIGQHKVVVLIDSGSTHNFISEKVADM 367
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
L LP+ T+P+ V + G+ K QG V +ILQG+ L L D+++G+ WL
Sbjct: 368 LHLPVVPTKPFTVKVANGTPLKCQGRFEHVHVILQGIPFSLTLYSLPLTGLDLVLGVQWL 427
Query: 230 KTLGATHINWKTHSMKFNTRNTIGKNQ 256
+ L NWK +M+F N K Q
Sbjct: 428 EQLETVVCNWKKLTMEFQWENQTHKLQ 454
>gi|449450213|ref|XP_004142858.1| PREDICTED: uncharacterized protein LOC101220049 [Cucumis sativus]
Length = 250
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 85/120 (70%)
Query: 121 VVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPY 180
VVE+ + SVVGLT+ T+K+ EI K+V+VL D GA+ NFIS+++V L+LP +T Y
Sbjct: 10 VVELCIKSVVGLTNVGTMKIRGEIQGKEVIVLVDCGATQNFISDKLVATLQLPTKDTSNY 69
Query: 181 GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
GVIL +G+A K +G+C V L L G I DFLPL+LG D+I+G+ WL +LG T ++WK
Sbjct: 70 GVILGSGTAIKGKGVCEQVKLNLNGWMITTDFLPLELGGVDVILGMQWLYSLGVTEVDWK 129
>gi|449504808|ref|XP_004162300.1| PREDICTED: uncharacterized protein LOC101229007 [Cucumis sativus]
Length = 746
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 44 AHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQE---LQVVLLQEYEAEAQAV 100
A + R ++L++AE QS +E GLC++C+EK+S H+C+ +E L+++++ E + +
Sbjct: 231 ARKERPMKRLSDAEFQSRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEII 290
Query: 101 E-DVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASH 159
E D ++ EL + G + VVE+S+NSVVGL++P T+K+ +I ++V+VL D GA+H
Sbjct: 291 EEDNTEQEELNTIEVTGDEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATH 350
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGV 199
NFIS +V L++ T YGVIL +G+A K +GIC +
Sbjct: 351 NFISEGLVEELQINTKITSNYGVILGSGTAIKGKGICEAI 390
>gi|449470602|ref|XP_004153005.1| PREDICTED: uncharacterized protein LOC101220479 [Cucumis sativus]
Length = 583
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 115/186 (61%), Gaps = 6/186 (3%)
Query: 65 GLCYKCDEKFSPGHRCR---KQELQVVLLQEYEA-EAQAVEDVGQERELESKPTEGAKNQ 120
GLC++C+EK+S GH+C+ K+EL +++L E E+ E +A + E +E E +
Sbjct: 275 GLCFRCNEKYSLGHKCKVREKRELMLLILNEEESNEKEATIEDEVEEVIEPNHLELNMDN 334
Query: 121 VVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPY 180
+E+ L + G+TS T+KL +N ++VV+L DSGA++NFIS +V L+L I +
Sbjct: 335 PIELRL--ITGVTSKGTMKLKGHVNGREVVILIDSGATNNFISQVLVDELQLSIDPGTRF 392
Query: 181 GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
GV + G+ + GIC+ V + L+ + IV DFL ++LG D+++G+ WL + G ++W
Sbjct: 393 GVTIGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWLDSTGTMKVHWP 452
Query: 241 THSMKF 246
+ +M F
Sbjct: 453 SLTMTF 458
>gi|147774273|emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 8/210 (3%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++L+ ++++ ++ GLCY CD+K++PGH+C+ L ++ E + +V + R +
Sbjct: 275 QRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIMECDESSDDEVPKSEVAEGRASK 334
Query: 111 SKPTEGAKNQVVEV----SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
SK + +VE+ S++++VG +PKT++ I + VV+L D+G++HNF+ V
Sbjct: 335 SK----EETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRAVVILVDTGSTHNFMDPSV 390
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
+ LP TE V + G A +++G C V L +QG DF L LG DI++G+
Sbjct: 391 IQRAHLPSNPTEGLSVKVANGQAVRSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIVLGV 450
Query: 227 HWLKTLGATHINWKTHSMKFNTRNTIGKNQ 256
WL+TLG ++ M+F+ + K Q
Sbjct: 451 QWLQTLGPILWDFSRLQMEFSVWDKPRKLQ 480
>gi|147843077|emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
Length = 1366
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 8/210 (3%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++L+ ++++ ++ GLCY CD+K++PGH+C+ L ++ E + +V + R +
Sbjct: 242 QRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSXRLFIMECDESSDDEVPKSEVAEGRASK 301
Query: 111 SKPTEGAKNQVVEV----SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
SK + +VE+ S++++VG +PKT++ I + VV+L D+G++HNF+ V
Sbjct: 302 SK----EETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRAVVILVDTGSTHNFMDPSV 357
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
+ LP TE V + G A +++G C V L +QG DF L LG DI++G+
Sbjct: 358 IQRAHLPSNPTEGLSVKVANGQAVRSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIVLGV 417
Query: 227 HWLKTLGATHINWKTHSMKFNTRNTIGKNQ 256
WL+TLG ++ M+F+ + K Q
Sbjct: 418 QWLQTLGPILWDFSRLQMEFSVWDKPRKLQ 447
>gi|307136196|gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
Length = 473
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 89/131 (67%)
Query: 121 VVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPY 180
+VE+SLN VVGLT+P T K+ + ++++V++ D GA+HNFIS ++V L LP+ Y
Sbjct: 342 MVELSLNFVVGLTAPGTFKIKGRVEDREIVIMVDCGATHNFISLKLVESLNLPMAAITNY 401
Query: 181 GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
GVI+ + A + + +C+G+ + L + IVEDFLPL+LG D+++G+ WL+ GA ++WK
Sbjct: 402 GVIMGSEKAVQGREMCKGITVGLPVITIVEDFLPLELGNLDMVLGMQWLQKQGAMTVDWK 461
Query: 241 THSMKFNTRNT 251
+M F +T
Sbjct: 462 ALTMNFVVEDT 472
>gi|147807720|emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
Length = 1448
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 80/108 (74%)
Query: 138 LKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICR 197
+K+ I +K+V++L DSGA+HNF+S E+V L LP+T T Y V++ TG + K +GICR
Sbjct: 1 MKIKGMIGSKEVIILVDSGATHNFLSLELVQQLALPLTTTTSYEVMMGTGISVKGKGICR 60
Query: 198 GVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMK 245
GV + +QG+ +VEDFLPL+LG TD+I+G+ WL TLG +NWK +MK
Sbjct: 61 GVCISMQGLTVVEDFLPLELGNTDVILGMPWLGTLGDVKVNWKMLTMK 108
>gi|147838975|emb|CAN68101.1| hypothetical protein VITISV_042364 [Vitis vinifera]
Length = 566
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 117/209 (55%), Gaps = 11/209 (5%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
++LT E+ + GL + CD+KF+ GH+CR +L LL E + +E ++
Sbjct: 241 MKRLTWEEMXKRRAXGLXFNCDDKFTXGHKCRGPQL---LLLEGNSXP------NKENDI 291
Query: 110 ESKPTEGAKNQVVE--VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
+ + E A N+ E +S +++ G ++PKT+++ ++I +VVVL DSG++HNFIS +V
Sbjct: 292 DEEIEEPAINEQTEPXISFHALTGWSTPKTMRITTKIAQHEVVVLIDSGSTHNFISEKVA 351
Query: 168 LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
+L LP+ T+P+ V + G+ K Q V +ILQG+ L L D+++G+
Sbjct: 352 YMLHLPVVPTKPFTVKVANGTPLKCQWRFEHVHVILQGIPFSLTLYSLPLTXLDLVLGVQ 411
Query: 228 WLKTLGATHINWKTHSMKFNTRNTIGKNQ 256
WL+ LG NWK +M+F N K Q
Sbjct: 412 WLEQLGTVVCNWKKLTMEFQWENQTHKLQ 440
>gi|449524806|ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228221 [Cucumis sativus]
Length = 703
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 112/198 (56%), Gaps = 29/198 (14%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
+R++T++E++ +E GL +E + ++ V +E E
Sbjct: 258 YRRMTDSEMRMKKEKGL--------------------------WEDLSGEIDKVAEETED 291
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
E+ E ++ +SL+S+VG +SPKT+K+ EI N +VVVL D GA HNFIS EVV
Sbjct: 292 EN---EQINTEIANLSLHSLVGFSSPKTIKIKGEIRNCEVVVLVDGGAIHNFISEEVVKE 348
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
LK+P+ + YGV+L TG +A G+C+ V L + + I DFLPL LG D+ +G+ WL
Sbjct: 349 LKIPVETLDAYGVVLGTGGVVRATGMCKSVNLTIVNLSITHDFLPLPLGSADVNLGVTWL 408
Query: 230 KTLGATHINWKTHSMKFN 247
+TLG N+K M+F+
Sbjct: 409 ETLGKVIFNYKLSEMEFS 426
>gi|208609051|dbj|BAG72148.1| hypothetical protein [Lotus japonicus]
gi|208609062|dbj|BAG72153.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 117/201 (58%), Gaps = 11/201 (5%)
Query: 43 PAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVED 102
P + G ++LT+ ELQ GLC+KC +K+ H C + Q++L++ E E +
Sbjct: 335 PEKKWNGGQRLTQTELQERSRKGLCFKCGDKWGKEHICSMKNYQLILMEVEEDEEEEEIF 394
Query: 103 VGQ---ERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASH 159
E LE K V+++SLNS GLTS ++ K+ +I N++V++L D GA+
Sbjct: 395 EEAEDGEFVLEGK--------VLQLSLNSKEGLTSNRSFKVKGKIGNREVLILIDCGATS 446
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGI 219
NFIS ++V+ L++P+ T Y V + G+ + G+C+ + L +QG+ I++ F L LG
Sbjct: 447 NFISQDLVVELEIPVIATSEYVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGG 506
Query: 220 TDIIMGIHWLKTLGATHINWK 240
T++++G+ WL +LG N++
Sbjct: 507 TEVVLGMDWLASLGNIEANFQ 527
>gi|208609057|dbj|BAG72151.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 117/201 (58%), Gaps = 11/201 (5%)
Query: 43 PAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVED 102
P + G ++LT+ ELQ GLC+KC +K+ H C + Q++L++ E E +
Sbjct: 335 PEKKWNGGQRLTQTELQERSRKGLCFKCGDKWGKEHICSMKNYQLILMEVEEDEEEEEIF 394
Query: 103 VGQ---ERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASH 159
E LE K V+++SLNS GLTS ++ K+ +I N++V++L D GA+
Sbjct: 395 EEAEDGEFVLEGK--------VLQLSLNSKEGLTSNRSFKVKGKIGNREVLILIDCGATS 446
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGI 219
NFIS ++V+ L++P+ T Y V + G+ + G+C+ + L +QG+ I++ F L LG
Sbjct: 447 NFISQDLVVELEIPVIATSEYVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGG 506
Query: 220 TDIIMGIHWLKTLGATHINWK 240
T++++G+ WL +LG N++
Sbjct: 507 TEVVLGMDWLASLGNIEANFQ 527
>gi|208609055|dbj|BAG72150.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 117/201 (58%), Gaps = 11/201 (5%)
Query: 43 PAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVED 102
P + G ++LT+ ELQ GLC+KC +K+ H C + Q++L++ E E +
Sbjct: 335 PEKKWNGGQRLTQTELQERSRKGLCFKCGDKWGKEHICSMKNYQLILMEVEEDEEEEEIF 394
Query: 103 VGQ---ERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASH 159
E LE K V+++SLNS GLTS ++ K+ +I N++V++L D GA+
Sbjct: 395 EEAEDGEFVLEGK--------VLQLSLNSKEGLTSNRSFKVKGKIGNREVLILIDCGATS 446
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGI 219
NFIS ++V+ L++P+ T Y V + G+ + G+C+ + L +QG+ I++ F L LG
Sbjct: 447 NFISQDLVVELEIPVIATSEYVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGG 506
Query: 220 TDIIMGIHWLKTLGATHINWK 240
T++++G+ WL +LG N++
Sbjct: 507 TEVVLGMDWLASLGNIEANFQ 527
>gi|147789424|emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
Length = 2822
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 8/210 (3%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++L+ ++++ ++ GLCY CD+K++PGH+C+ L ++ E + +V + R +
Sbjct: 240 QRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIMECDESSDDKVPKSEVAEGRASK 299
Query: 111 SKPTEGAKNQVVEV----SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
SK + +VE+ S++++VG +PKT++ I + VV+L D+G++HNF+ V
Sbjct: 300 SK----EETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRAVVILVDTGSTHNFMDPSV 355
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
+ LP TE V + G A ++G C V L +QG DF L LG DI++G+
Sbjct: 356 IQRAHLPSNPTEGLSVKVANGQAVCSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIVLGV 415
Query: 227 HWLKTLGATHINWKTHSMKFNTRNTIGKNQ 256
WL+TLG ++ M+F+ + K Q
Sbjct: 416 QWLQTLGPILWDFSRLQMEFSVWDKPQKLQ 445
>gi|208609049|dbj|BAG72147.1| hypothetical protein [Lotus japonicus]
gi|208609053|dbj|BAG72149.1| hypothetical protein [Lotus japonicus]
Length = 1520
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 117/201 (58%), Gaps = 11/201 (5%)
Query: 43 PAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVED 102
P + G ++LT+ ELQ GLC+KC +K+ H C + Q++L++ E E +
Sbjct: 297 PEKKWNGGQRLTQTELQERSRKGLCFKCGDKWGKEHICSMKNYQLILMEVEEDEEEEEIF 356
Query: 103 VGQ---ERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASH 159
E LE K V+++SLNS GLTS ++ K+ +I N++V++L D GA+
Sbjct: 357 EEAEDWEFVLEGK--------VLQLSLNSKEGLTSNRSFKVKGKIGNREVLILIDCGATI 408
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGI 219
NFIS ++V+ L++P+ T Y V + G+ + G+C+ + L +QG+ I++ F L LG
Sbjct: 409 NFISQDLVVELEIPVIATSEYVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGG 468
Query: 220 TDIIMGIHWLKTLGATHINWK 240
T++++G+ WL +LG N++
Sbjct: 469 TEVVLGMDWLASLGNIEANFQ 489
>gi|449526146|ref|XP_004170075.1| PREDICTED: uncharacterized protein LOC101232562, partial [Cucumis
sativus]
Length = 497
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 93/142 (65%)
Query: 106 ERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNE 165
++EL + VVE+S+NSVV L++P T+K+ ++ K+++VL D GA+HNFIS
Sbjct: 29 QKELNVAEVIQEEQTVVELSINSVVRLSNPGTMKVKGKLLGKEIIVLVDCGATHNFISES 88
Query: 166 VVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMG 225
+V L++ +T +GVIL +G+A K +G+C + +I+ +++DFLPL+LG D I+G
Sbjct: 89 LVEELQISTKSTTNFGVILGSGTAIKGKGVCEAIEMIIGEWRVIDDFLPLELGSVDAILG 148
Query: 226 IHWLKTLGATHINWKTHSMKFN 247
+ WL +LG T ++WK + F
Sbjct: 149 MQWLYSLGITEVDWKNLILTFT 170
>gi|356529593|ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
Length = 572
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 121/221 (54%), Gaps = 10/221 (4%)
Query: 33 FNSDRIVQVYP----AHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPG-HRCRKQELQV 87
F+S R V P +G R + E + + GLC+KC K+ P H+C ++ L+V
Sbjct: 294 FSSARRVDGGPRSGTTDRWKGIRSIHNEEFEERRAKGLCFKCGGKYHPTFHKCLERALRV 353
Query: 88 VLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVG-LTSPKTLKLASEINN 146
++L E E + E V ++ E + VE L V+G + T+++ +I+N
Sbjct: 354 LILGEGETMTKEGEIV----SMKDVTVESEEEVEVECKLMGVLGSMGESHTMRVEGKIHN 409
Query: 147 KKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGV 206
++VL DSGASHNFIS +V L L IT T + L G G+C+GV + + G+
Sbjct: 410 VDLLVLIDSGASHNFISPKVTTALGLVITPTVAKSIKLGDGHRLITNGVCKGVNMQMGGI 469
Query: 207 EIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
E++ D L L+LG D+++G+ WL+TLG ++WK +M+F+
Sbjct: 470 EVIVDALVLELGGMDMVLGVAWLRTLGNVIMDWKAMTMQFS 510
>gi|449479800|ref|XP_004155711.1| PREDICTED: uncharacterized protein LOC101230021 [Cucumis sativus]
Length = 1480
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 88/126 (69%)
Query: 121 VVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPY 180
VVE+S+NSVVGL++P T+K+ ++ ++++VL D GA+HNFIS +V L++ +T Y
Sbjct: 1203 VVELSINSVVGLSNPGTMKVKGKLLGREIIVLIDCGATHNFISESLVEELQISTKSTTNY 1262
Query: 181 GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
GVIL +G+A K +G+C + +++ +++DFL L+LG D I+G+ WL +LG T ++WK
Sbjct: 1263 GVILGSGTAIKGKGVCEAIEMMIGEWRVIDDFLLLELGGVDAILGMQWLYSLGITEVDWK 1322
Query: 241 THSMKF 246
+ F
Sbjct: 1323 NLILTF 1328
>gi|147783182|emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
Length = 1360
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
F ++T E + +E GLCY CDEKF GHRC + +L ++ ++ EDV
Sbjct: 285 FHRITNQEARERREKGLCYYCDEKFVAGHRCERPQLFMI----EDSPHMNTEDVEG---- 336
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
+ P + + E+ +++ G P+T+ + ++ NK V+VL D G++HNFI ++ ++V
Sbjct: 337 -AHPEQEHHEVIPEIYFHAIAGTEHPQTICVMGKLKNKNVMVLIDGGSTHNFI-DQAIIV 394
Query: 170 LK--LPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
K LP+ + V++ + G CR + L +QG + D+ L + +++G+
Sbjct: 395 FKFGLPVIRDRKFEVMVANREKIECAGQCRSLTLTIQGYSVTADYYILPVAACQLVLGVQ 454
Query: 228 WLKTLGATHINWKTHSMKFNTRNT 251
WL+TLG +++K +M F T
Sbjct: 455 WLETLGPIEMDYKQLTMNFKMEGT 478
>gi|208609065|dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 116/201 (57%), Gaps = 11/201 (5%)
Query: 43 PAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVED 102
P + G ++LT+ ELQ GLC+KC +K+ H C + Q++L++ E E +
Sbjct: 335 PEKKWNGGQRLTQTELQERSRKGLCFKCGDKWGKEHICSMKNYQLILMEVEEDEEEEEIF 394
Query: 103 VGQ---ERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASH 159
E LE K V+++SLNS LTS ++ K+ +I N++V++L D GA+
Sbjct: 395 EEAEDGEFVLEGK--------VLQLSLNSKERLTSNRSFKVKGKIGNREVLILIDCGATS 446
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGI 219
NFIS ++V+ L++P+ T Y V + G+ + G+C+ + L +QG+ I++ F L LG
Sbjct: 447 NFISQDLVVELEIPVIATSEYVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGG 506
Query: 220 TDIIMGIHWLKTLGATHINWK 240
T++++G+ WL +LG N++
Sbjct: 507 TEVVLGMDWLASLGNIEANFQ 527
>gi|449479937|ref|XP_004155752.1| PREDICTED: uncharacterized protein LOC101232675 [Cucumis sativus]
Length = 436
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 111/191 (58%), Gaps = 2/191 (1%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++L++ E ++ + GLC+ C+EK+S GHRC+ +E + ++L E E+ + V+ E +E
Sbjct: 79 KRLSDTEFRARLDKGLCFSCNEKYSLGHRCKMREKRELILNEEESGGEEVKMEETEEVIE 138
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
A + E+ L ++ GLTS T+KL + ++VV+L DSGA++NFI V +
Sbjct: 139 LNQLVVA--ETTEIELKTLTGLTSKGTMKLKGHVKGREVVILIDSGATNNFIHEAVAMEG 196
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLK 230
L I +GV + G+ K +GICR V L+ + ++ DFL ++LG D+++G+ WL
Sbjct: 197 GLSIELGTQFGVTVGDGTRCKGKGICRKVEPRLKEMTVITDFLVVELGNIDVVLGMQWLD 256
Query: 231 TLGATHINWKT 241
T G KT
Sbjct: 257 TTGTMKTLEKT 267
>gi|449531517|ref|XP_004172732.1| PREDICTED: uncharacterized protein LOC101232451 [Cucumis sativus]
Length = 392
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 91/141 (64%)
Query: 106 ERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNE 165
E E ++ +N +E+S+NSVVGL++ T+K+ +I +VVVL D GA+H+FI +
Sbjct: 22 ETEDKTVAIGNVENLNIELSINSVVGLSNSGTMKVKGKIQGTEVVVLIDCGATHSFIVDN 81
Query: 166 VVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMG 225
+V LKLP+T T GVIL +G+A K +GIC V +++ +IV+ FLPL+L D+I+
Sbjct: 82 LVTSLKLPLTETSNCGVILGSGAAVKGKGICGQVEVMVGEWKIVDSFLPLELEGVDVILD 141
Query: 226 IHWLKTLGATHINWKTHSMKF 246
+ WL +LG T NW+ M F
Sbjct: 142 MQWLHSLGVTEFNWRKLVMTF 162
>gi|124359710|gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 5/199 (2%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQER 107
R F L+ EL ++ GLC+KC F P H+C ++L+V++L+E E + + E
Sbjct: 94 RSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKLLAVEV 153
Query: 108 ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
+ E EG + + +G + P+++KL I VVVL DSGA+HNFIS ++V
Sbjct: 154 DDEE---EGDGEMCMMEFFH--LGHSRPQSIKLMGVIKEVPVVVLVDSGATHNFISQQLV 208
Query: 168 LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
+ + +T + L GS +K +G C G+ + + V + D DLG D+++GI
Sbjct: 209 HKMNWAVVDTPCMSIKLGDGSYSKTKGTCEGLEVDVGDVHLEIDAQLFDLGGVDMVLGIE 268
Query: 228 WLKTLGATHINWKTHSMKF 246
WL+TLG +NW +M F
Sbjct: 269 WLRTLGDMIVNWNKQTMSF 287
>gi|147802690|emb|CAN72998.1| hypothetical protein VITISV_043958 [Vitis vinifera]
Length = 1078
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 115/202 (56%), Gaps = 13/202 (6%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
++LT AE+Q GLC+ CDEKF+P H+C+ +L ++ E + + ++ G L
Sbjct: 189 MKQLTWAEMQRRHAQGLCFNCDEKFAPRHKCKGXQLLLL---EGXYDEEENDEAGAHTHL 245
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
+ E+SL+++ ++ +T+ +++++ +++VL DSG++HNFI+ +V +
Sbjct: 246 XGE---------XEISLHALTRWSTARTMXVSAKVGPHELIVLIDSGSTHNFINERIVEL 296
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEI-VEDFLPLDLGITDIIMGIHW 228
L+LP+ TEP+ V + G K QG V ++LQG+ + L L D+++G+H
Sbjct: 297 LQLPMVPTEPFNVKVANGDPLKCQGRFENVSVLLQGIPFTLSTLYSLPLIGLDMVLGVHX 356
Query: 229 LKTLGATHINWKTHSMKFNTRN 250
L+ LG + K +M+F+ ++
Sbjct: 357 LEQLGTVVCDXKIMTMEFSWKD 378
>gi|147770944|emb|CAN69535.1| hypothetical protein VITISV_013569 [Vitis vinifera]
Length = 617
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQER-EL 109
++L+ E+Q + GLC+ D+KF+ HRC+ + +LL E + + D+ + + ++
Sbjct: 149 KRLSWEEMQRRRAKGLCFNYDDKFTSAHRCKGPQ---ILLLEGSIDDDSEGDIKEAKTDI 205
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
S P E+SL+++ G T+ KT +I +VV DSG++HNFIS++V +
Sbjct: 206 PSDP---------EISLHALTGWTTAKT-----KIGTHDIVVFIDSGSTHNFISDKVAAL 251
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
L L + T P+ V + K QG + ++LQG+ F L L D+++G+ WL
Sbjct: 252 LHLLVVPTAPFHVRVANDQPLKCQGRFHNIHILLQGIPFSITFYSLPLTSLDLVLGVQWL 311
Query: 230 KTLGATHINWKTHSMKFNTRN 250
+ LG+ +WK +M+F N
Sbjct: 312 EQLGSVVCDWKRMTMEFQWAN 332
>gi|89887334|gb|ABD78322.1| polyprotein [Primula vulgaris]
Length = 1359
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 124/246 (50%), Gaps = 14/246 (5%)
Query: 5 RLNTQPDPHVSGFEKMLPGSVFLCTWGGFNSDRIVQVYPAHEGRGFRKLTEAELQSNQEC 64
+L+ + P+ F+ P + T+ N+ + P ++LT+ EL ++
Sbjct: 172 KLHLEKKPNFRTFQSQAPNNQ--ATFSKTNNTTAITKLPP-----IKRLTQDELTDRRQK 224
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
LCY CDEK+ GH C K ++ LLQ E + + E E+ E A E+
Sbjct: 225 NLCYNCDEKWFRGHVCVKP--KIFLLQNVEEFENEINEESVEEIDENIVGENA-----EI 277
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
+L ++ G+T+ +++ ++ +KV +L DSG++HNFI + V +LKL ++ V +
Sbjct: 278 TLQAITGVTNSTSIRFVGKLKGQKVSILVDSGSTHNFIDPKWVPLLKLSNVQSDIMEVKI 337
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
G K+ G C V L++Q + DFL L L D+++G+HWL LG + ++K +M
Sbjct: 338 ANGDKIKSSGTCEKVKLLIQENQFEVDFLLLPLVGYDLVLGVHWLSQLGVINCDFKNLTM 397
Query: 245 KFNTRN 250
F N
Sbjct: 398 TFTHGN 403
>gi|6466937|gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 103/178 (57%), Gaps = 8/178 (4%)
Query: 67 CYKCDEKFSPGHRCRKQELQ-VVLLQEYEAEAQAVEDVGQ---ERELESKPTEGAKNQVV 122
C C +++ GH+C+ Q+L+ + + +E E E+ +E++ + E E + +P EG K
Sbjct: 442 CRYCGDRWFQGHKCKPQKLKGLAITEEVEEESPLIEELNEPLTEEEGDPEPAEGFKV--- 498
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
++L+S+ + +++K+ I N KVV+L DSGA+ NFIS +V +T T +GV
Sbjct: 499 -MTLSSLNDESQEQSMKMRGYIGNTKVVLLVDSGATCNFISEALVREKGWLVTQTRSFGV 557
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
+ G K+ G C + L +QG+E V+D+ DLG D+++G WL LG T NW+
Sbjct: 558 KVGGGRIIKSSGKCVDIPLEVQGIEFVQDYYLFDLGDLDLVLGFSWLAGLGETRANWR 615
>gi|108864287|gb|ABA92869.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 413
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 100/202 (49%), Gaps = 24/202 (11%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQER 107
R FR+L+ AEL + GLCY CDEKF GH+C + + EY D E
Sbjct: 151 RQFRRLSPAELAERRCQGLCYNCDEKFVRGHKCAR-----LFYIEY--------DDNVEG 197
Query: 108 ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
++E P E VSLN + GL T++L EI ++VV L DSG++HNFI E+
Sbjct: 198 DMEPAPDEP------RVSLNVLAGLDGANTMRLPVEIAGERVVALVDSGSTHNFIHTELA 251
Query: 168 --LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMG 225
L L L + Y V++ G + G C + L ++G D LD+ DII+G
Sbjct: 252 RHLCLHLSPVRHDLY-VVVANGDRLVSPGRCANLRLRIEGKLFTVDCFALDISTVDIILG 310
Query: 226 IHWLKTLGATHINWKTHSMKFN 247
WL TLG I W +M+ +
Sbjct: 311 TEWLSTLGP--ILWDFRNMRMS 330
>gi|62734405|gb|AAX96514.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 575
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 100/202 (49%), Gaps = 24/202 (11%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQER 107
R FR+L+ AEL + GLCY CDEKF GH+C + + EY D E
Sbjct: 313 RQFRRLSPAELAERRCQGLCYNCDEKFVRGHKCAR-----LFYIEY--------DDNVEG 359
Query: 108 ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
++E P E VSLN + GL T++L EI ++VV L DSG++HNFI E+
Sbjct: 360 DMEPAPDEP------RVSLNVLAGLDGANTMRLPVEIAGERVVALVDSGSTHNFIHTELA 413
Query: 168 --LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMG 225
L L L + Y V++ G + G C + L ++G D LD+ DII+G
Sbjct: 414 RHLCLHLSPVRHDLY-VVVANGDRLVSPGRCANLRLRIEGKLFTVDCFALDISTVDIILG 472
Query: 226 IHWLKTLGATHINWKTHSMKFN 247
WL TLG I W +M+ +
Sbjct: 473 TEWLSTLGP--ILWDFRNMRMS 492
>gi|356569674|ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
Length = 1433
Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQE-----------YEAEAQ 98
F + T +E+ +E GLCY CD+K+S H C+ + L ++ + + + A
Sbjct: 251 FTQRTPSEIAYRRERGLCYNCDDKWSASHHCKGRVLLLIADPDTPDNPDNSEPPFNSPAP 310
Query: 99 AVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGAS 158
++ +L+ P +SLN++ GL +P+T +L IN+ ++ VL DSG++
Sbjct: 311 SLPASTPPTDLDPIPDPDLPFPTPHISLNALSGLPTPETFRLFGYINHTRITVLIDSGST 370
Query: 159 HNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLG 218
HNF+ + L LP T P V++ G+ +C + LQ F L +
Sbjct: 371 HNFLQPRLATFLHLPTVPTNPLRVLVGNGAVLTCTHLCPDTTISLQSHHFTLTFHLLPIS 430
Query: 219 ITDIIMGIHWLKTLGATHINWKTHSMKFN 247
D+I+GI WLK LG ++ + MKF+
Sbjct: 431 GADVILGIQWLKLLGPITTDYTSLIMKFH 459
>gi|356511037|ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
Length = 1863
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 43 PAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVED 102
P F + T E+ +E GLCY C+EK+S HRC+ + V+L EA ++++
Sbjct: 210 PPRTKPPFVQRTPEEMAYRREKGLCYNCEEKWSSSHRCKGR---VLLFIADSDEASSMDN 266
Query: 103 VGQERELESKPTEGA------KNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSG 156
E + PT+ + +SL+++ G+ + T +L IN+ +V +L DSG
Sbjct: 267 PSMEDP--APPTQATLPPFDPTPLLPHISLHAMAGVPATDTFRLYGVINHTRVTILVDSG 324
Query: 157 ASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLD 216
++HNF+ + L LP+ +T V++ GS + + C L+LQ L
Sbjct: 325 STHNFVQPRIAKFLGLPMEDTTSLQVMVGNGSVLECKQSCPATTLLLQQHSFTVTLRVLP 384
Query: 217 LGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+ D+++G+ WL+TLG ++ + +M+F
Sbjct: 385 ISGADVVLGVEWLRTLGPIITDYTSFTMQFT 415
>gi|27764548|gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 47 GRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQE 106
+ +K++ AE+Q +E LCY CDEKFSP H+C + QV+LLQ E + ED E
Sbjct: 307 NQNIKKISPAEIQLRREKNLCYFCDEKFSPAHKCPNR--QVMLLQLEETD----EDQTDE 360
Query: 107 RELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
+ + ++ + +SLN++ G T++ ++ V +L D G+S NFI V
Sbjct: 361 QVMVTEEA-NMDDDTHHLSLNAMRGSNGVGTIRFTGQVGGIAVKILVDGGSSDNFIQPRV 419
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
VLKLP+ V++ G A+GI + + L +QG E+ L + D+I+G
Sbjct: 420 AQVLKLPVEPAPNLRVLVGNGQILSAEGIVQQLPLHIQGQEVKVPVYLLQISGADVILGS 479
Query: 227 HWLKTLGATHINWKTHSMKF 246
WL TLG ++ ++KF
Sbjct: 480 TWLATLGPHVADYAALTLKF 499
>gi|147864527|emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
Length = 1412
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 7/212 (3%)
Query: 35 SDRIVQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYE 94
S I + P R R + +L + GLC+ CDEKF+PGH+C++++L V+ +Q E
Sbjct: 289 STNIPKTNPGITTRNHRNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQ-VE 347
Query: 95 AEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTD 154
+ + E Q L +++ +++SLN+++ +T+ L + + VL D
Sbjct: 348 TDGEGPEGNLQMEGLXE------EDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLID 401
Query: 155 SGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLP 214
SG+SHNF+S++V + V + G +C +QG E + +
Sbjct: 402 SGSSHNFLSSKVAKRVDCCWQKARGIRVTVANGQELHCTALCSDFRWRMQGQEFIAEVYV 461
Query: 215 LDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
L L D+I+G WL TLG N+ T M F
Sbjct: 462 LPLETYDLILGTQWLATLGDISWNFNTLQMGF 493
>gi|147852240|emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
Length = 1371
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 7/212 (3%)
Query: 35 SDRIVQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYE 94
S I + P R + +L + GLC+ CDEKF+PGH+C++++L V+ +Q E
Sbjct: 289 STNIPKTNPGITTRNHXNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQ-VE 347
Query: 95 AEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTD 154
+ + E Q L G +++ +++SLN+++ +T+ L + + VL D
Sbjct: 348 TDGEGPEGNLQMEGL------GEEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLID 401
Query: 155 SGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLP 214
SG+SHNF+S++V + V + G +C +QG E + +
Sbjct: 402 SGSSHNFLSSKVAKRVDCCWQKARGIRVTVANGHELHCTALCSDFRWRMQGQEFIAEVYV 461
Query: 215 LDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
L L D+I+G WL TLG N+ T M F
Sbjct: 462 LPLETYDLILGTQWLATLGDISWNFNTLQMGF 493
>gi|449463685|ref|XP_004149562.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
[Cucumis sativus]
Length = 787
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 98/148 (66%), Gaps = 4/148 (2%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQ----VVLLQEYEAEAQAVEDVGQE 106
++L++A+ QS +E GLC++C+EK+S H+C+ +E + +V++ + E E+ ++
Sbjct: 258 KRLSDAKFQSRKEKGLCFRCNEKYSHDHKCKMKEQRELRMLVVMGDNEEYEIIEEEEVEQ 317
Query: 107 RELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
+EL + VVE+S+NSVVGL++P T+K+ ++ K+++VL D GA+HNFIS +
Sbjct: 318 KELNVAEVIQEEQAVVELSINSVVGLSNPGTMKVKGKLLGKEIIVLIDCGATHNFISESL 377
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQG 194
V L++ +T YGVIL +G+A K +G
Sbjct: 378 VEELQISTKSTTNYGVILGSGTAIKGKG 405
>gi|18568267|gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
Length = 2749
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQER 107
R FR+LT AE Q + GLC+ CDE + GH C + L + +Y + E +
Sbjct: 669 RPFRRLTPAEQQERRRQGLCFNCDEPYVRGHVCPR--LFYLENDDYIDDEPQEEGADLQI 726
Query: 108 ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
LE +P A + VSL+++ G+ +P + L IN ++V L DSG++ NF+S ++
Sbjct: 727 ALEQEPPSRAAAIIPTVSLHALAGVRTPNAMLLPVSINGHRLVALVDSGSTTNFMSVGLM 786
Query: 168 LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
L+LP T V + G QG+ R V L + + D + L LG D+I+G
Sbjct: 787 SRLQLPSTPHPTIKVQVANGDNIPCQGMARSVDLRVGTEQFSIDCIGLTLGTFDVILGFE 846
Query: 228 WLKTLGATHINWKTHSMKFN 247
+L+ LG + SM F
Sbjct: 847 FLRLLGPILWDCDRLSMSFT 866
>gi|356574444|ref|XP_003555357.1| PREDICTED: uncharacterized protein LOC100813803 [Glycine max]
Length = 2140
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 8/206 (3%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVL-LQEYEAEAQAVEDVGQERE 108
F + T+ ++ +E GLCY CDEK++ HRC+ + L + E + + D +
Sbjct: 125 FVQRTQEDMAYRREKGLCYNCDEKWNSSHRCKGRVLFFIANSDETSSPESSPSDPSSPLK 184
Query: 109 LESKPTEGAKNQVVE-------VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNF 161
E T Q + +SL+++ G+ + T +L IN +V +L DSG++HNF
Sbjct: 185 SEHDHTLLEATQAFDLTPLQPHISLHAMAGVPATDTFRLYGLINKTRVTILVDSGSTHNF 244
Query: 162 ISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITD 221
+ V L LP+ +T+P V++ GS Q + +++Q V L L D
Sbjct: 245 VQPRVAKFLNLPLHDTQPLRVMVGNGSVLDCQQMIPDTTILIQEHRFVVTLRLLPLSGAD 304
Query: 222 IIMGIHWLKTLGATHINWKTHSMKFN 247
+++G+ WL+TLG ++ +MKF
Sbjct: 305 VVLGVEWLRTLGPVITDYTDFTMKFT 330
>gi|218197921|gb|EEC80348.1| hypothetical protein OsI_22431 [Oryza sativa Indica Group]
Length = 402
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 16/204 (7%)
Query: 43 PAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVED 102
P G FR+L+ AE+ +E GLC+ C EKFS H R+ ++ + L E +
Sbjct: 94 PGTTGTRFRRLSAAEMAECREKGLCFNCPEKFSKDHH-RQCSMKGIYLLEMD-------- 144
Query: 103 VGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFI 162
E + + + V +SL+++ G+ + KT++LA I + L DSG++H F+
Sbjct: 145 -------EGEDDDSINDDTVTISLHALTGIRTSKTMRLAVIIGGVTMSALVDSGSTHTFV 197
Query: 163 SNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDI 222
+ E L L T V++ G + GIC G+ + + + + D + L D+
Sbjct: 198 ATEAARRLGLSPTTKSGLNVMVANGDQVTSSGICSGIPIKIDSEDFIIDCYVIPLEGYDV 257
Query: 223 IMGIHWLKTLGATHINWKTHSMKF 246
++G+ WL+TLG ++ +M F
Sbjct: 258 VLGVQWLRTLGPILWDFDKLTMSF 281
>gi|323134589|gb|ADX31265.1| unknown [Triticum aestivum]
Length = 1231
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 110/203 (54%), Gaps = 9/203 (4%)
Query: 46 EGRGFRKLTEAELQSNQEC-GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVG 104
+GRG ++ A L++ + GLC+KC E++ GH+C +Q+ +++E QA + V
Sbjct: 374 QGRGDDRV--AALRNYRRARGLCFKCGERWGQGHQC-GPTVQLHVVEELLELLQADQGVP 430
Query: 105 QERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISN 164
+ +S ++ ++ +S + G T+P+T++L +I +++++L DSG+SH+F+S+
Sbjct: 431 VVPDPDSD-----EDVLMCISKGATTGQTTPRTVRLLGQIGGQEMLILVDSGSSHSFLSD 485
Query: 165 EVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIM 224
VV L+LPI V + G G+ QG E V D L LG D+I+
Sbjct: 486 TVVARLQLPIQAMSTVAVKIADGGTLSCSGVVPECRWKTQGHEFVTDLRVLALGCYDMIV 545
Query: 225 GIHWLKTLGATHINWKTHSMKFN 247
G+ WL++ G I+W + FN
Sbjct: 546 GMDWLESCGPMWIDWSAKQLIFN 568
>gi|357130210|ref|XP_003566743.1| PREDICTED: uncharacterized protein LOC100838891 [Brachypodium
distachyon]
Length = 635
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 25/197 (12%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
F+KL AE++ Q GLC+ CDEKF GHRC+ L A+ + ED+
Sbjct: 134 FKKLNAAEMEERQAKGLCFNCDEKFVRGHRCK------CLFYIEVADKEEEEDL------ 181
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
++SL ++ G+ + T++L + ++++ L DSG++HNFIS E+
Sbjct: 182 -------------QISLLAITGVRTSDTMQLVVWVGERELLALIDSGSTHNFISEELAAH 228
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+ P V + G G+ R + + V D + LG D+++G HWL
Sbjct: 229 VSAPFCTGRRLRVTIANGDHVTCSGLLRHTAIAIGQESFVVDLYAIPLGGFDVVLGTHWL 288
Query: 230 KTLGATHINWKTHSMKF 246
KTLG +++ M F
Sbjct: 289 KTLGPILWDFERLYMSF 305
>gi|224109270|ref|XP_002333289.1| predicted protein [Populus trichocarpa]
gi|222835888|gb|EEE74309.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 88/155 (56%), Gaps = 15/155 (9%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
++L E+Q + G+C+ CDEKF+PGH+C+K L LL E + E +D
Sbjct: 276 MKRLAWDEMQKRRSQGICFNCDEKFTPGHKCQKPRL---LLLEGDDETSLQDD------- 325
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
+ EG + Q+ SL+++ G + +T+++ + I N+ + VL DSG++HNFIS +
Sbjct: 326 --EEFEGDEPQI---SLHAITGWSIARTMRIMARIENQDLTVLIDSGSTHNFISERIANW 380
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQ 204
L LP+ T+P+ V + G+ K QG + ++LQ
Sbjct: 381 LHLPVIPTQPFNVKVANGNPLKCQGRFENIHVLLQ 415
>gi|116309032|emb|CAH66146.1| OSIGBa0114M03.4 [Oryza sativa Indica Group]
Length = 1448
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 46 EGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQ 105
EGR ++LT+AE + + GLCY CDEK++ GH Q L ++ E + + ED G
Sbjct: 257 EGRQIKRLTQAEQEERRRKGLCYNCDEKYTRGHNRVCQRLFLLEGIEEDEDDGTPEDFGD 316
Query: 106 ERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNE 165
GA++ V SL ++ G++ T+++A + +V L DSG++HNFIS
Sbjct: 317 A---------GAEDAPV-FSLQAIAGVSFTDTMQVAVTLGTASLVALLDSGSTHNFISEA 366
Query: 166 VVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMG 225
LP+ ++ G G+ RG L + G D + L D+++G
Sbjct: 367 AAQRSGLPLQQRPRLTAMVANGERVTCIGVIRGAPLTIGGNSFPADLFVMPLAGYDVVLG 426
Query: 226 IHWLKTLGATHINWKTHSMKFNTR 249
WL LG + T M F R
Sbjct: 427 TRWLGALGPIVWDLATRKMTFQHR 450
>gi|356573714|ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810380 [Glycine max]
Length = 1273
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 2/196 (1%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
+K++ AE+Q +E GLCY CD+KF+ H+C + + ++ L++ + EA+ DV
Sbjct: 230 KKISPAEMQLRREKGLCYFCDDKFTFNHKCPNRLMLMLQLEDDKGEAEMSFDVVSRDN-- 287
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
+ E + +SLN++ G T++ + IN V VL D+G+S NF+ V
Sbjct: 288 NSIAETVIDNPHHLSLNALKGGLGGGTIRFVAHINTLPVKVLVDNGSSDNFLQPRVAKFF 347
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLK 230
KLPI + + V++ G+ G+ R + + QG L + D+I+G WLK
Sbjct: 348 KLPIEPSPLFKVMVDNGNYMTPIGMIRELSIQAQGNRFQLPVFLLPISGADLILGAIWLK 407
Query: 231 TLGATHINWKTHSMKF 246
TLG+ ++ + +KF
Sbjct: 408 TLGSHIADYDSLQIKF 423
>gi|242093834|ref|XP_002437407.1| hypothetical protein SORBIDRAFT_10g026363 [Sorghum bicolor]
gi|241915630|gb|EER88774.1| hypothetical protein SORBIDRAFT_10g026363 [Sorghum bicolor]
Length = 1609
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 60/201 (29%), Positives = 106/201 (52%), Gaps = 7/201 (3%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQER 107
R F++LT E+ ++ GLCY CDE + GH+C + L + + +Y E D G +
Sbjct: 423 RLFKRLTPDEMAERRKQGLCYNCDEPYVRGHKCAR--LFFLEVTDYIVEEPEDTDSGSTQ 480
Query: 108 ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
E P + K + SL+++ G+ + +T++L + ++ L DSG++HNFIS+
Sbjct: 481 PAEDAPYDTDKPLI---SLSAITGIRAHETMQLRVHVGPHELTALLDSGSTHNFISSAAA 537
Query: 168 LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVE-DFLPLDLGITDIIMGI 226
L ++E V + G +G+ RGV L + G+E+ + D + L D+++GI
Sbjct: 538 HRAGLHFKDSEGAHVTVANGDRVLCRGLARGVNLQI-GMEVFKVDCYAIPLDSCDMVLGI 596
Query: 227 HWLKTLGATHINWKTHSMKFN 247
WL+TLG ++ M+F+
Sbjct: 597 AWLRTLGPILWDFDNLRMEFS 617
>gi|218199564|gb|EEC81991.1| hypothetical protein OsI_25921 [Oryza sativa Indica Group]
Length = 426
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 5/182 (2%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
G C+KC EK+ PGH+C K +Q+ +L+E A E E TEG ++ + +
Sbjct: 163 GECFKCGEKYGPGHKCPKS-VQLHVLEELLEVFLAQEGNSHNEE----ETEGTSDEELVL 217
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
S +++G T +T++L + N++++VL DSG+ NF+S ++V L+LP + P V +
Sbjct: 218 SECAMLGTTGKRTIRLQGLLQNQEILVLVDSGSFSNFLSEQLVSKLQLPTQTSAPSQVTI 277
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
G + + QG D L LG D+I+G+ WL+ I+WK M
Sbjct: 278 ADGGKILCNQVVANLEWWCQGHTFSTDLKVLSLGSYDMILGMEWLEDFSPMWIDWKRKKM 337
Query: 245 KF 246
F
Sbjct: 338 TF 339
>gi|12322948|gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 9/204 (4%)
Query: 47 GRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQE 106
G +R + E E Q + GLCY CDEKF+P H ++ Q+ + E AVE V +
Sbjct: 287 GGSYRPVKEVE-QKSDHLGLCYFCDEKFTPEHYLVHKKTQLFRMDVDEEFEDAVE-VLSD 344
Query: 107 RELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
+ E KP + ++S+N+V G++ KT+ + ++ + + +L DSG++HNFI + V
Sbjct: 345 DDHEQKP-------MPQISVNAVSGISGYKTMGVKGTVDKRDLFILIDSGSTHNFIDSTV 397
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
L + + V + G G +G LQ D L + L D+++G+
Sbjct: 398 AAKLGCHVESAGLTKVAVADGRKLNVDGQIKGFTWKLQSTTFQSDILLIPLQGVDMVLGV 457
Query: 227 HWLKTLGATHINWKTHSMKFNTRN 250
WL+TLG +K M+F +N
Sbjct: 458 QWLETLGRISWEFKKLEMQFFYKN 481
>gi|62733754|gb|AAX95863.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1126
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 9/189 (4%)
Query: 60 SNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEA--EAQAVEDVGQERELESKPTEGA 117
S + G C+KC EK+ P H+C K +Q+ +L+E + Q ++ GQ+ E +EG+
Sbjct: 370 SRRAKGECFKCGEKWGPNHKCPK-SVQLHVLEELLEVLQIQENQEAGQDCE-----SEGS 423
Query: 118 KNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNT 177
++V VS +V G +T++L I N++V++L DSG+S +F++ +V L L + T
Sbjct: 424 DEELV-VSECAVSGTMGKRTVRLQGLIQNQEVLILIDSGSSSSFVAQHLVDSLSLAVLET 482
Query: 178 EPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHI 237
P V++ G + + V QG D L LG D+I+G+ WL+ I
Sbjct: 483 APAQVVIADGGVLQCNKVATKVDWWCQGHSFTSDLKVLQLGGYDVILGMDWLEHFSPMWI 542
Query: 238 NWKTHSMKF 246
NW+ ++F
Sbjct: 543 NWQRKKLRF 551
>gi|147786921|emb|CAN64438.1| hypothetical protein VITISV_011230 [Vitis vinifera]
Length = 361
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 89/153 (58%), Gaps = 11/153 (7%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++L+ E+Q + GLC+ CD+K + GHRC+ Q++LL+ ++ + E +
Sbjct: 220 KRLSWEEMQKRRAQGLCFNCDDKSTSGHRCKGP--QLLLLEG---------NINDDSEGD 268
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
+K E E+SL+++ G T+ KT+++ ++I +VVL DSG++HNFIS++V +L
Sbjct: 269 TKEAEADLPSDPEISLHALTGWTATKTMRVTAKIGTHDIVVLIDSGSTHNFISDKVAALL 328
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
LP+ T P+ V + G K QG + ++L
Sbjct: 329 HLPVVPTAPFHVRVANGQPLKCQGRFDNIHILL 361
>gi|147773289|emb|CAN64782.1| hypothetical protein VITISV_003835 [Vitis vinifera]
Length = 1575
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 77/133 (57%)
Query: 122 VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYG 181
+E++L++++G T PKT+++ + I VVVL DSG++HNFIS + +L+LP+ TE +
Sbjct: 617 LEITLHALMGWTVPKTMRIVARIGAHDVVVLVDSGSTHNFISERMANLLRLPVVPTESFM 676
Query: 182 VILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKT 241
V + G + QG V + LQG L L DI++GI WL+ LG+ +W+
Sbjct: 677 VRVANGENLRCQGRFEEVQINLQGTIFSLTLYSLPLTGLDIVLGIQWLELLGSVGCDWRE 736
Query: 242 HSMKFNTRNTIGK 254
+M+F N K
Sbjct: 737 LTMEFMWENQTKK 749
>gi|449456255|ref|XP_004145865.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 818
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 108/209 (51%), Gaps = 44/209 (21%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L++ E ++ + GLC++C+EK++PGHRC+ K+EL +++L E E D +E
Sbjct: 304 KRLSDTEFRARLDKGLCFRCNEKYAPGHRCKGREKRELMLLILNEEE-------DHKREE 356
Query: 108 ELESKPTEGAKNQVVEVSLNS------VVGLTSPKTLKLASEINNKKVVVLTDSGASHNF 161
+ E + +E + +E+++++ + G+TS T+KL ++ D G
Sbjct: 357 DTEDEASEVIELNHLELNMDNPIELRLITGVTSKGTMKLKGHLS-------IDPGTR--- 406
Query: 162 ISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITD 221
+GV + + + GIC+ V + L+ + IV DFL ++LG D
Sbjct: 407 ------------------FGVTIGNDNQCEGSGICKRVKVKLKELTIVADFLAVELGTVD 448
Query: 222 IIMGIHWLKTLGATHINWKTHSMKFNTRN 250
+++G+ WL T G ++W + +M F ++
Sbjct: 449 LVLGMQWLDTTGTMKVHWPSLTMTFWAKD 477
>gi|449466919|ref|XP_004151173.1| PREDICTED: uncharacterized protein LOC101214111 [Cucumis sativus]
Length = 503
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 34/204 (16%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L++ + ++ + GLC+KC+EK+SPGHRC+ K+E + +L E E+ G
Sbjct: 172 KRLSDTKFRARLDNGLCFKCNEKYSPGHRCKVREKREPMLFILNEEESNGDDSSSEGVAE 231
Query: 108 E-LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
E +E + A + E+ L ++ TS T+KL ++ K+ F+
Sbjct: 232 EVIELNQLDLA--ETTEIELRTITNFTSKGTMKLKGKVKGKR---------GTQFV---- 276
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
V + + K +G+C+ V L LQ + I+ DFL ++LG D+++G+
Sbjct: 277 ---------------VTIGDDTRCKGRGVCKRVELRLQELTIIADFLAVELGNVDLVLGM 321
Query: 227 HWLKTLGATHINWKTHSMKFNTRN 250
WL T+G ++W + +M F ++
Sbjct: 322 QWLDTIGTMKVHWPSLTMTFLAKD 345
>gi|449474333|ref|XP_004154142.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
Length = 566
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 105/203 (51%), Gaps = 34/203 (16%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L++ E ++ + GLC+KC+EK+SPGHRC+ K+EL +++L E E + + +
Sbjct: 103 KRLSDTEFRARLDKGLCFKCNEKYSPGHRCKGREKRELMLLILNEEEDHKREEDAEDEAS 162
Query: 108 E-LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
E +E E + +E+ L + G+TS +T KL ++ D G
Sbjct: 163 EVIELNHLELNMDNPIELRL--ITGVTSKRTKKLKGHLS-------IDLGTR-------- 205
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
+GV + G+ + GIC+ V + L+ + IV DFL ++LG D+++G+
Sbjct: 206 -------------FGVTIGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGM 252
Query: 227 HWLKTLGATHINWKTHSMKFNTR 249
WL + G ++W + +M F T+
Sbjct: 253 QWLDSTGTMKVHWPSLTMTFWTK 275
>gi|449462405|ref|XP_004148931.1| PREDICTED: uncharacterized protein LOC101213941 [Cucumis sativus]
Length = 902
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 105/203 (51%), Gaps = 34/203 (16%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L++ E ++ + GLC+KC+EK+SPGHRC+ K+EL +++L E E + + +
Sbjct: 296 KRLSDTEFRARLDKGLCFKCNEKYSPGHRCKGREKRELMLLILNEEEDHKREEDAEDEAS 355
Query: 108 E-LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
E +E E + +E+ L + G+TS +T KL ++ D G
Sbjct: 356 EVIELNHLELNMDNPIELRL--ITGVTSKRTKKLKGHLS-------IDLGTR-------- 398
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
+GV + G+ + GIC+ V + L+ + IV DFL ++LG D+++G+
Sbjct: 399 -------------FGVTIGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGM 445
Query: 227 HWLKTLGATHINWKTHSMKFNTR 249
WL + G ++W + +M F T+
Sbjct: 446 QWLDSTGTMKVHWPSLTMTFWTK 468
>gi|147765520|emb|CAN60437.1| hypothetical protein VITISV_035177 [Vitis vinifera]
Length = 818
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 58/80 (72%)
Query: 168 LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
L + +P+ TE YGV+L+ G + K +G+CRGV L+LQGV+IVED +PLDLG +D I+G+
Sbjct: 246 LQVMIPLDETEGYGVLLKIGVSVKGEGVCRGVQLLLQGVKIVEDVMPLDLGGSDFILGMQ 305
Query: 228 WLKTLGATHINWKTHSMKFN 247
WL+TLG N KT +M F
Sbjct: 306 WLETLGKIKFNCKTLTMWFK 325
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 49 GFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVL 89
FRKL +AELQ +E GL Y+ DEKFS HRC+ +ELQV++
Sbjct: 210 SFRKLLDAELQMKREKGLYYRRDEKFSSRHRCQLKELQVMI 250
>gi|124360394|gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
Length = 435
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQER 107
+ R L+ E+ ++ GLC+KC + P H+C + L V++L++ D E
Sbjct: 45 KNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLED---------DSEDEN 95
Query: 108 ELESKPTEGAKNQVVEVSLNSVV---GLTSPKT----------LKLASEINNKKVVVLTD 154
E+ E E+ LN + LT + ++ ++ V++L D
Sbjct: 96 EVRVLNDEDVDTGAEELQLNVLTFENALTFDRQTEYYQDRFQCIRFQGKVREIPVLMLVD 155
Query: 155 SGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLP 214
SGA+ NF+S + L L L IT T + L G G C GV + +QGVE D +
Sbjct: 156 SGANKNFMSRRLALALGLRITETPVRRIRLGDGHVVPTLGECHGVIISVQGVEWEIDVML 215
Query: 215 LDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+L D+++G+ WL +G T I+W M+F+
Sbjct: 216 FELRGYDLVLGMAWLTQIGCTCIDWVEKKMRFD 248
>gi|124360392|gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
Length = 435
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQER 107
+ R L+ E+ ++ GLC+KC + P H+C + L V++L++ D E
Sbjct: 45 KNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLED---------DSEDEN 95
Query: 108 ELESKPTEGAKNQVVEVSLNSVV---GLTSPKT----------LKLASEINNKKVVVLTD 154
E+ E E+ LN + LT + ++ ++ V++L D
Sbjct: 96 EVRVLNDEDVDTGAEELQLNVLTFENALTFDRQTEYYQDRFQCIRFQGKVREIPVLMLVD 155
Query: 155 SGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLP 214
SGA+ NF+S + L L L IT T + L G G C GV + +QGVE D +
Sbjct: 156 SGANKNFMSRRLALALGLRITETPVRRIRLGDGHVVPTLGECHGVIISVQGVEWEIDVML 215
Query: 215 LDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+L D+++G+ WL +G T I+W M+F+
Sbjct: 216 FELRGYDLVLGMAWLTQIGCTCIDWVEKKMRFD 248
>gi|147772855|emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]
Length = 1308
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 73/124 (58%)
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
E++L+++ G P+T+++ + I VV L DSG++HNFIS+ VV L+L + T P+ V
Sbjct: 211 EITLHALTGWIVPRTMQIKAIIGAHDVVALIDSGSTHNFISDRVVETLRLLVKPTTPFTV 270
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTH 242
+ G +G + + LQG E DF + L D+++GI WL+TLG+ +WK
Sbjct: 271 RVANGERLSCKGKYEKLTVNLQGNEFHLDFFSVPLNGLDMVLGIQWLETLGSVVCDWKKR 330
Query: 243 SMKF 246
+M F
Sbjct: 331 TMDF 334
>gi|147815400|emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]
Length = 1242
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 94/201 (46%), Gaps = 61/201 (30%)
Query: 45 HEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVG 104
H ++LTE+ELQ+ +E G+C+KCDEKFS GHRC+K EL+V+L+ E E E ED
Sbjct: 173 HREIPIKRLTESELQARREKGICFKCDEKFSLGHRCKK-ELRVLLVHEDERE----EDNQ 227
Query: 105 QERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISN 164
+ +P+ +E+SLNSVVGLT+P T+K+ I +K+ + + +
Sbjct: 228 FDERATMEPSLIELKDAMELSLNSVVGLTTPGTMKIKGTIGSKEGLTVVED--------- 278
Query: 165 EVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIM 224
L L + NT D+I+
Sbjct: 279 ----FLXLELGNT-------------------------------------------DVIL 291
Query: 225 GIHWLKTLGATHINWKTHSMK 245
G+ WL TLG +NWK +MK
Sbjct: 292 GMPWLGTLGDVKVNWKMLTMK 312
>gi|15230067|ref|NP_189618.1| aspartyl protease-like protein [Arabidopsis thaliana]
gi|332644083|gb|AEE77604.1| aspartyl protease-like protein [Arabidopsis thaliana]
Length = 421
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Query: 129 VVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGS 188
V+ LT K ++ I + KVVV DSGA+ NFI E+ LKLP + T V+L
Sbjct: 115 VIDLTRNKGMRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQ 174
Query: 189 ATKAQGICRGVGLILQGVEIVEDFLPLDLGIT--DIIMGIHWLKTLGATHINWKTHSMKF 246
++ G C G+ L +Q VEI E+FL LDL T D+I+G WL LG T +NW+ F
Sbjct: 175 CIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSF 234
Query: 247 N 247
+
Sbjct: 235 S 235
>gi|91805527|gb|ABE65492.1| hypothetical protein At3g29750 [Arabidopsis thaliana]
Length = 259
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Query: 129 VVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGS 188
V+ LT K ++ I + KVVV DSGA+ NFI E+ LKLP + T V+L
Sbjct: 41 VIDLTRNKGMRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQ 100
Query: 189 ATKAQGICRGVGLILQGVEIVEDFLPLDLGIT--DIIMGIHWLKTLGATHINWKTHSMKF 246
++ G C G+ L +Q VEI E+FL LDL T D+I+G WL LG T +NW+ F
Sbjct: 101 CIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSF 160
Query: 247 N 247
+
Sbjct: 161 S 161
>gi|116830535|gb|ABK28225.1| unknown [Arabidopsis thaliana]
Length = 260
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Query: 129 VVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGS 188
V+ LT K ++ I + KVVV DSGA+ NFI E+ LKLP + T V+L
Sbjct: 41 VIDLTRNKGMRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQ 100
Query: 189 ATKAQGICRGVGLILQGVEIVEDFLPLDLGIT--DIIMGIHWLKTLGATHINWKTHSMKF 246
++ G C G+ L +Q VEI E+FL LDL T D+I+G WL LG T +NW+ F
Sbjct: 101 CIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSF 160
Query: 247 N 247
+
Sbjct: 161 S 161
>gi|357130317|ref|XP_003566796.1| PREDICTED: retrotransposon-derived protein PEG10-like [Brachypodium
distachyon]
Length = 717
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 65 GLCYKCDEKFSPGHRC------RKQELQVVLL---QEYEAEAQAVEDVGQERELESKPTE 115
GLCYKC EKF PGH+C + + +QVV L + +A AQ ED+ E ++
Sbjct: 337 GLCYKCGEKFIPGHQCAIVPAPQIKAVQVVELLSDEVLDAIAQG-EDMDDETDMH----- 390
Query: 116 GAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPIT 175
+SLN+V G P T++L + NK +++L DSG+SH+FI + ++ L +
Sbjct: 391 --------LSLNAVSGADHPDTIRLRCLVGNKVLIMLIDSGSSHSFIDSHLLTSLNYSVV 442
Query: 176 NTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGAT 235
V + G+ + G+ +Q DF + LG D I+G+ WLK GA
Sbjct: 443 PIPLTAVKVANGAVLQCDSKVSGLTWWVQHHTFQYDFRVVQLGEYDAILGMDWLKQWGAM 502
Query: 236 HINW 239
+W
Sbjct: 503 ACHW 506
>gi|449479939|ref|XP_004155753.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 426
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 38/213 (17%)
Query: 44 AHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQ---ELQVVLLQEYEAEAQAV 100
+ E ++L+++E ++ + GLC++C+EK+SPG C+ + EL + E E E
Sbjct: 13 SREETSVKRLSDSEFRARLDKGLCFRCNEKYSPGQWCKGKTNCELMFFIANEEELEEVNG 72
Query: 101 EDVGQER--ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGAS 158
++ G+ ELE+ EG E++L +++G TS K V+
Sbjct: 73 KEEGELETVELETLEIEGK----TEIALRTILGFTS------------KGVI-------- 108
Query: 159 HNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLG 218
NE L L + +GV + G+A + +G+C+ V + L ++IV DFL + LG
Sbjct: 109 -----NE----LNLLVEEKTKFGVTIGDGTALEGKGVCKRVEVKLPELKIVADFLAIKLG 159
Query: 219 ITDIIMGIHWLKTLGATHINWKTHSMKFNTRNT 251
D+++G+ WL T G ++W T +M F T
Sbjct: 160 RIDVVLGMQWLCTTGFMGVHWPTMTMTFMAGTT 192
>gi|242085390|ref|XP_002443120.1| hypothetical protein SORBIDRAFT_08g009530 [Sorghum bicolor]
gi|241943813|gb|EES16958.1| hypothetical protein SORBIDRAFT_08g009530 [Sorghum bicolor]
Length = 1574
Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAE----AQAVEDV 103
R FR+LT AE + GLCY CDE + PGH C Q L + + +Y E
Sbjct: 456 RPFRRLTPAEQAERRRQGLCYNCDEPYVPGHVC--QRLFYLDVDDYVVEDAVPVGDAAAA 513
Query: 104 GQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFIS 163
RE + P N V VSL++V G+ + T+ L + ++++ L D+G++HNF+
Sbjct: 514 AALREEPAAPELPNANAFV-VSLHAVAGIRTENTMLLPVLVKGERLLALLDTGSTHNFLR 572
Query: 164 NEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
+ L L E V + G +GI V + + G + LDLG D+I
Sbjct: 573 GTTMRRLGLSPAGGEQLRVTVANGDRLPCEGIAHDVPISIAGEVFSITCVGLDLGSFDLI 632
Query: 224 MGIHWLKTLGATHINWKTHSMKFN 247
+G+ +L+TLG ++ +M F+
Sbjct: 633 LGVDYLRTLGPILWDFGAMTMAFS 656
>gi|242085388|ref|XP_002443119.1| hypothetical protein SORBIDRAFT_08g009520 [Sorghum bicolor]
gi|241943812|gb|EES16957.1| hypothetical protein SORBIDRAFT_08g009520 [Sorghum bicolor]
Length = 1595
Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAE----AQAVEDV 103
R FR+LT AE + GLCY CDE + PGH C Q L + + +Y E
Sbjct: 456 RPFRRLTPAEQAERRRQGLCYNCDEPYVPGHVC--QRLFYLDVDDYVVEDAVPVGDAAAA 513
Query: 104 GQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFIS 163
RE + P N V VSL++V G+ + T+ L + ++++ L D+G++HNF+
Sbjct: 514 AALREEPAAPELPNANAFV-VSLHAVAGIRTENTMLLPVLVKGERLLALLDTGSTHNFLR 572
Query: 164 NEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
+ L L E V + G +GI V + + G + LDLG D+I
Sbjct: 573 GTTMRRLGLSPAGGEQLRVTVANGDRLPCEGIAHDVPISIAGEVFSITCVGLDLGSFDLI 632
Query: 224 MGIHWLKTLGATHINWKTHSMKFN 247
+G+ +L+TLG ++ +M F+
Sbjct: 633 LGVDYLRTLGPILWDFGAMTMAFS 656
>gi|115481476|ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group]
gi|15217201|gb|AAK92545.1|AC051624_3 Putative retroelement [Oryza sativa Japonica Group]
gi|31431040|gb|AAP52878.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|113638940|dbj|BAF26245.1| Os10g0317000 [Oryza sativa Japonica Group]
Length = 1476
Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 38 IVQVYPAH---EGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYE 94
+V+ PA EGR ++L++A+ + + GLCY CDEK+S H + L V E
Sbjct: 246 VVKPAPATVTVEGRPVKRLSQAQQEERRRLGLCYNCDEKYSRSHNKVCKRLFFVEGGAIE 305
Query: 95 AEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTD 154
VED +E +E+ P SL++V G+ K + L + +V L D
Sbjct: 306 EGDDTVEDDTEEATVEA-PV---------FSLHAVAGIPLGKPILLQVTLGAASLVALVD 355
Query: 155 SGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLP 214
+G++HNFI + L LP+ + G G+ R + +QG+ D
Sbjct: 356 TGSTHNFIGEDAALRTGLPVQPRPRLTATVANGEKVSCPGVLRRAPITIQGMAFDVDLYV 415
Query: 215 LDLGITDIIMGIHWLKTLGATHINW 239
+ L D+++G W+ LG T I W
Sbjct: 416 MPLAGYDMVLGTQWMAHLGTT-IAW 439
>gi|78183241|emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRC---RKQELQVVLLQEYEAEAQAVEDVGQER 107
+KLT E+ ++ LC+ C EK++PGH C +K ++ + + E+E + +E V QE
Sbjct: 287 KKLTPKEMDEHRTQNLCFFCHEKYTPGHDCPQRKKSQVFFMAVDGLESE-ELLEGVEQES 345
Query: 108 ELESKPTEGAKNQV--VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNE 165
E + + N + +SL+++ G + ++L + K++ VL D+G++HNFI+ +
Sbjct: 346 RPEVNVPKVSLNALHGDSISLDALDGDSEYPMMRLTGWLGKKRIFVLIDTGSTHNFINQK 405
Query: 166 VVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMG 225
+ I +P + + G + G C G+ +QG ++ + + L D+I+G
Sbjct: 406 LCHEGLSKIKCLQPVKITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILG 465
Query: 226 IHWLKTLGATHINWKTHSMKF 246
+ WL+ G ++ M+F
Sbjct: 466 MQWLRQRGKISWDFTNLIMEF 486
>gi|10122034|gb|AAG13423.1|AC051634_4 putative plant disease resistance polyprotein [Oryza sativa
Japonica Group]
Length = 894
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 19/193 (9%)
Query: 65 GLCYKCDEKFSPGHRC------RKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAK 118
GLC+KC +K++P HRC + +L+ VL + A E E +
Sbjct: 327 GLCFKCGDKYTPEHRCAVGGQIKAMQLEEVLTDDILDAVIAAEQSDDEED---------- 376
Query: 119 NQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTE 178
+SLN++ G P + L + +++K +++L D G+SH+FI +L LP+
Sbjct: 377 ---CHISLNALTGAHLPTAILLRALVHSKVLLLLVDYGSSHSFIDYNFAQMLGLPLKPIP 433
Query: 179 PYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHIN 238
V + G Q + G +QG D + LG+ D I+G+ WL+ G +
Sbjct: 434 STLVKVANGDCLPCQYVVPGFSWWIQGHTFTYDMRVVTLGVHDAILGMDWLEQWGEMSCH 493
Query: 239 WKTHSMKFNTRNT 251
W ++KF + +
Sbjct: 494 WANKTLKFQYQGS 506
>gi|449443978|ref|XP_004139752.1| PREDICTED: uncharacterized protein LOC101213746 [Cucumis sativus]
Length = 431
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Query: 83 QELQVVLLQEY--EAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKL 140
+EL+++ + + E EAQ +E E +N +E+S+NS+VGL++P T+KL
Sbjct: 3 EELEIIEDEHFDVETEAQTIE------------IEKVENMNIELSINSIVGLSNPGTMKL 50
Query: 141 ASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGV 199
+I +KVV++ DSGA+H+FI+ V L LP+T T YGVIL +G A K +GI V
Sbjct: 51 KGKIKERKVVIIIDSGATHSFIAKNFVTTLSLPMTETSNYGVILGSGVAVKGKGIRSNV 109
>gi|12322008|gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana]
gi|10998138|dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 10/200 (5%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
+K+++ E+ + GLCY CDEK++P H ++ Q+ + E A E++ + + E
Sbjct: 313 KKMSQQEMSDRRSKGLCYFCDEKYTPEHYLVHKKTQLFRMDVDEEFEDAREELVNDDD-E 371
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
P ++S+N+V G+ KT+++ + K + +L DSG++HNF+ L
Sbjct: 372 HMP---------QISVNAVSGIAGYKTMRVKGTYDKKIIFILIDSGSTHNFLDPNTAAKL 422
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLK 230
+ V + G + +G LQ D L + L D+++G+ WL+
Sbjct: 423 GCKVDTAGLTRVSVADGRKLRVEGKVTDFSWKLQTTTFQSDILLIPLQGIDMVLGVQWLE 482
Query: 231 TLGATHINWKTHSMKFNTRN 250
TLG +K M+F N
Sbjct: 483 TLGRISWEFKKLEMRFKFNN 502
>gi|77555174|gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1548
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 52 KLTEAELQSNQEC-------GLCYKCDEKFSPGHRCRKQE---LQVVLLQEYEAEAQAVE 101
KL EL Q+ GLC+KC EK++PGH C KQE L+ + +QE E++ +
Sbjct: 330 KLAPGELWKAQQLKEYRRAQGLCFKCGEKYAPGHVCAKQEGVQLKALHVQE---ESEVLS 386
Query: 102 DVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNF 161
D L++ + + +SL+++ G T++L + + N+ +++L DSG++H+F
Sbjct: 387 D----EVLDAITALDVSSDSISLSLHAMAGTCPSHTVQLRALVQNQVIIILVDSGSTHSF 442
Query: 162 ISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITD 221
I + L+L + +P V + G + +QG E L +G D
Sbjct: 443 IDAGLCHRLQLSTESIQPTSVRVANGETLCCEAKVPQFAWWVQGHEFSFPMRVLPMGGYD 502
Query: 222 IIMGIHWLKTLGATHINWKTHSMKFNTRNTI 252
+++G+ WL +W ++F+ ++
Sbjct: 503 LVLGMDWLTQFSPMTCDWAAKQLQFSYNGSV 533
>gi|147775005|emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]
Length = 1122
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 68/119 (57%)
Query: 138 LKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICR 197
+++ ++I +VVVL DSG++HNFIS +V +L L + T+P+ V + G+ K QG
Sbjct: 1 MRITAKIGQHEVVVLIDSGSTHNFISEKVADMLHLSVVPTKPFTVKVANGTPLKCQGRFE 60
Query: 198 GVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQ 256
V +ILQG+ L L D+++G+ WL+ LG NWK +M+F N K Q
Sbjct: 61 HVHVILQGIPFSLTLYSLPLTGLDLVLGVQWLEQLGTVVCNWKKLTMEFQWENQTHKLQ 119
>gi|21397270|gb|AAM51834.1|AC105730_8 Putative plant disease resistance polyprotein [Oryza sativa
Japonica Group]
gi|108706267|gb|ABF94062.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 624
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 19/193 (9%)
Query: 65 GLCYKCDEKFSPGHRC------RKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAK 118
GLC+KC +K++P HRC + +L+ VL + A E E +
Sbjct: 133 GLCFKCGDKYTPEHRCAVGGQIKAMQLEEVLTDDILDVVIAAEQSDDEED---------- 182
Query: 119 NQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTE 178
+SLN++ G ++L + +++K +++L DSG+SHNFI +L LP+
Sbjct: 183 ---CHISLNALTGAYLLTAIRLRALVHSKVLLLLVDSGSSHNFIDYNFAQMLGLPLKPIP 239
Query: 179 PYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHIN 238
V + G Q + G +QG D + LG D I+G+ WL+ G +
Sbjct: 240 STLVKVANGDCLPCQYVVPGFFWWIQGHTFTYDMRVVTLGGHDAILGMDWLEQWGEMSCH 299
Query: 239 WKTHSMKFNTRNT 251
W ++KF + +
Sbjct: 300 WANKTLKFQYQGS 312
>gi|297608672|ref|NP_001061948.2| Os08g0451600 [Oryza sativa Japonica Group]
gi|215768264|dbj|BAH00493.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255678494|dbj|BAF23862.2| Os08g0451600 [Oryza sativa Japonica Group]
Length = 707
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 31 GGFNSDRI----VQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRC------ 80
GG ++ I +++ A + R +R+ GLC+KC +K+SP H+C
Sbjct: 59 GGTDTPAIKPERAELWKARQLRDYRRAN----------GLCFKCGDKYSPEHQCALGGQI 108
Query: 81 RKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKL 140
+ ++ V+ + A ED Q+ +SLNS+ G + T++L
Sbjct: 109 KAMQVTEVIPDDLLNAVTAEEDSDQDEN-------------CHISLNSLSGASHVNTIRL 155
Query: 141 ASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVG 200
+ + NK +++L DSG+SH+F+ +L L + P V + G Q +
Sbjct: 156 RALVQNKVLLLLVDSGSSHSFLDYNFAQLLGLQLQPIAPSLVKVANGDCIHCQFMVPQFT 215
Query: 201 LILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNT 251
QG D + LG D I+G+ WL G NW ++KF + T
Sbjct: 216 WWFQGRTFTYDMRVVPLGGHDAILGMDWLAQWGDMSCNWANKTLKFMYQGT 266
>gi|440577416|emb|CCI55439.1| PH01B031C15.22 [Phyllostachys edulis]
Length = 267
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 58 LQSNQECGLCYKCDEKFSPGHR--CRKQ-ELQVVLLQEYEAEAQAVEDVGQERELESKPT 114
++ + GLCY +EKF PGH+ C+ LQV E E E V
Sbjct: 1 MEERRSQGLCYNYNEKFHPGHQKLCKHIFSLQVEPDSEDEEEEPKV-------------- 46
Query: 115 EGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPI 174
+SL ++ G+ +T++LA IN ++ L DSG++HNF++ E+V + L +
Sbjct: 47 ------AATISLLALTGIRKTQTMQLAVIINGVHLLALVDSGSTHNFVAAELVARVGLSL 100
Query: 175 TNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGA 234
T V + G + GICR + + + + DFL + L D+++G+ WL +LG
Sbjct: 101 TPRTGLSVAVANGDHVTSGGICRATLISIDKEDFILDFLTIPLDGFDVVLGVQWLGSLGP 160
Query: 235 THINWKTHS--MKFN 247
I W H M+F
Sbjct: 161 --ITWDFHHRMMRFQ 173
>gi|387169525|gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
Length = 1557
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 7/240 (2%)
Query: 7 NTQPDPHVSGFEKMLPGSVFLCTWGGFNSDRIVQVYPAHEGRGFRKLTEAELQSNQECGL 66
N QP S +LP F + + + P + + RK T E+Q + GL
Sbjct: 349 NNQPYNKSSNTTALLPTPRFT------ENPKTLPYKPNNTNKPTRKFTYDEMQERRTKGL 402
Query: 67 CYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSL 126
C CDE ++PGH + ++ Q+ +++ E + ++V E E + Q +S
Sbjct: 403 CMFCDEPYTPGHHLKHRKSQIFVMECEEDDLDDEQEVNATVEEEDAVVNPNEEQPT-ISA 461
Query: 127 NSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRT 186
N++ G T+ ++L + K+ + D G++HNFI +V + + T P V
Sbjct: 462 NALNGSTTFNCMRLMGQYGKHKLHIFVDPGSTHNFIDIKVAKEINCKLEGTRPMTVDAAL 521
Query: 187 GSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
G T + +QG + L L DI++G+ WL TLG ++ M+F
Sbjct: 522 GGKTVTLFRSKDFTWRMQGYSFTTEVRTLPLDHWDIVLGVQWLATLGPILWDFTYLRMEF 581
>gi|356551381|ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
Length = 463
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPG-HRCRKQELQVVLLQEYEAEAQAVEDVGQE 106
+G R + E+ + GLC+KC K+ P H+C ++ L+V++L E +A+ D G+
Sbjct: 297 KGVRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCPERALRVLIL----GEGEALNDEGEI 352
Query: 107 RELESKPTEGAKNQVVEVSLNSVVG-LTSPKTLKLASEINNKKVVVLTDSGASHNFISNE 165
+E+ + + VE V+G + +T+K+ +I N V+VL DSGASHNFIS +
Sbjct: 353 MAMEAVQPDSEEEIEVECKSMGVLGSMGEHRTMKIEGKIENVDVLVLIDSGASHNFISPQ 412
Query: 166 VVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGL 201
V L L IT + + L G ++G+C G+ L
Sbjct: 413 VTTALGLTITASVAKHIKLGDGHKVVSEGVCYGLNL 448
>gi|253761750|ref|XP_002489250.1| hypothetical protein SORBIDRAFT_0012s014620 [Sorghum bicolor]
gi|241947110|gb|EES20255.1| hypothetical protein SORBIDRAFT_0012s014620 [Sorghum bicolor]
Length = 1445
Score = 83.6 bits (205), Expect = 8e-14, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEA-QAVEDVGQERELESKPTEGAKNQVVE 123
GLCY CDE ++ GH C Q L + +Y EA Q DV E+ E V+
Sbjct: 738 GLCYNCDELYTSGHVC--QRLLYLAADDYIEEAVQPQGDVAAPALQEAAAPEEEVANVLA 795
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI 183
VSL++ G+ + T+ L I + V+ L D+G++HNF+S ++ L L + V
Sbjct: 796 VSLHAFAGIRTTNTMLLPVLIKGECVLALLDTGSTHNFLSGAIMERLGLVPDGGDQLRVT 855
Query: 184 LRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHS 243
+ G + GI R V + ++G +DLG D I+G +L+TLG + + +
Sbjct: 856 VANGDKLRCAGIARNVPISIEGETFAITCADIDLGCFDFILGYDFLRTLGPITWDLEAKT 915
Query: 244 MKF 246
M F
Sbjct: 916 MAF 918
>gi|449445212|ref|XP_004140367.1| PREDICTED: uncharacterized protein LOC101210426 [Cucumis sativus]
Length = 497
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 49/208 (23%)
Query: 44 AHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQ---ELQVVLLQEYEAEAQAV 100
+ E ++L+++E ++ + GLC++C+EK+SPG C+ + EL + E E E
Sbjct: 101 SREETSVKRLSDSEFRARLDKGLCFRCNEKYSPGQWCKGKTNCELMFFIANEEELEEVNG 160
Query: 101 EDVGQER--ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGAS 158
++ G+ ELE+ EG E++L +++GL + K
Sbjct: 161 KEEGELETVELETLEIEGK----TEIALRTILGLHQKEKTK------------------- 197
Query: 159 HNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLG 218
+GV + G+A + +G+C+ V + L ++IV DFL + LG
Sbjct: 198 ---------------------FGVTIGDGTALEGKGVCKRVEVKLPELKIVADFLAIKLG 236
Query: 219 ITDIIMGIHWLKTLGATHINWKTHSMKF 246
D+++G+ WL T G ++W T +M F
Sbjct: 237 RIDVVLGMQWLSTTGFMGVHWPTMTMTF 264
>gi|242085414|ref|XP_002443132.1| hypothetical protein SORBIDRAFT_08g010830 [Sorghum bicolor]
gi|241943825|gb|EES16970.1| hypothetical protein SORBIDRAFT_08g010830 [Sorghum bicolor]
Length = 1462
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 43 PAHEGRG---FRKLTEAELQSNQECGLCYKCDEKFSPGHR--CRKQELQVVLLQEYEAEA 97
P GR R+L++ E+ + GLC+ C+E ++ GH C++ L E
Sbjct: 239 PCSHGRAEGAIRRLSKDEMAERRRQGLCFNCNEPYTRGHNRFCKR------LFFVDGVEV 292
Query: 98 QAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGA 157
VED + + + A SL++V G+ TL++ + + +V L+DSG+
Sbjct: 293 DDVEDAAEAGD------QAAGTDAPCYSLHAVAGVRLSDTLRVRVMVGSVSLVALSDSGS 346
Query: 158 SHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDL 217
SHNFIS L + + ++ G G+ ++QG D + L
Sbjct: 347 SHNFISERAAQRTGLLVVSRPRLSAVVANGERIACPGVLPQAPFVIQGSSFTADLFIMPL 406
Query: 218 GITDIIMGIHWLKTLGATHINWKTHSMKFNTR 249
D+++G WL TLG ++ +M F +
Sbjct: 407 AGFDVVLGAQWLGTLGPVTWDFTARTMSFQQQ 438
>gi|147810501|emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
Length = 1378
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 35 SDRIVQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYE 94
S I + P R R + +L + GLC+ CDEKF+PGH+C++++L V+ +Q E
Sbjct: 341 STNIPKTNPGITTRNHRNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQ-VE 399
Query: 95 AEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTD 154
+ + E Q L G +++ +++SLN+++ +T+ L + + VL D
Sbjct: 400 TDGEGPEGNLQMEGL------GKEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLID 453
Query: 155 SGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVED 211
SG+SHNF+S++V + V + G +C +QG E + +
Sbjct: 454 SGSSHNFLSSKVAKRVDCCWQKARGIRVTVANGQELHCTALCSDFRWRMQGQEFIAE 510
>gi|147837833|emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
Length = 1357
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 35 SDRIVQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYE 94
S I + P R R + +L + GLC+ CDEKF+PGH+C++++L V+ +Q E
Sbjct: 249 STNIPKTNPGITTRNHRNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQ-VE 307
Query: 95 AEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTD 154
+ + E Q L G +++ +++SLN+++ +T+ L + + VL D
Sbjct: 308 TDGEGPEGNLQMEGL------GEEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLID 361
Query: 155 SGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVED 211
SG+SHNF+S++V + V + G +C +QG E + +
Sbjct: 362 SGSSHNFLSSKVAKRVDCCWQKARGIRVTVANGHELHCTALCSDFRWRMQGQEFIAE 418
>gi|147811718|emb|CAN77256.1| hypothetical protein VITISV_008352 [Vitis vinifera]
Length = 1365
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 17/158 (10%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
RKL+ ELQ ++ LCY CDEK++ GH+C+K + + E+ +E +E
Sbjct: 525 RKLSPTELQRRRQQRLCYNCDEKYTMGHKCKKLF--------FIELEEENEESIEEEYVE 576
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
PT +SL+++ G+ SP+T+++ S+I + +L DSG++HNF+ ++ ++
Sbjct: 577 ETPT---------ISLHALAGVQSPQTMQIHSQIGKTPLTILIDSGSTHNFLHHKFAKII 627
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEI 208
L + + V++ G + G C GV L LQ + I
Sbjct: 628 GLKSERSCLFSVVVANGERLSSLGRCNGVKLFLQDIPI 665
>gi|28209489|gb|AAO37507.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1155
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 65 GLCYKCDEKFSPGHRC------RKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAK 118
GLC+KC +K++P HRC + +L+ VL + A E E +
Sbjct: 327 GLCFKCGDKYTPEHRCAVGGQIKAMKLEEVLTDDILDAVIAAEQSDDEED---------- 376
Query: 119 NQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTE 178
+SLN+ G P + L + +++K +++L DSG+SH+FI +L LP+
Sbjct: 377 ---CHISLNAFTGAHLPTAIHLRALVHSKVLLLLVDSGSSHSFIDYNFAHMLGLPLKPIP 433
Query: 179 PYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHIN 238
V + G Q + +QG D + L D I+G+ WL+ G +
Sbjct: 434 STLVKVANGDCLPCQYVVPSFSWWIQGHTFTYDMRVVTLEGHDAILGMDWLEQWGEMSCH 493
Query: 239 WKTHSMKFNTRNT 251
W ++KF + +
Sbjct: 494 WANKTLKFQYQGS 506
>gi|8778789|gb|AAF79797.1|AC020646_20 T32E20.30 [Arabidopsis thaliana]
Length = 1397
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 34 NSDRIVQVYPAHEGRGFRKLTEAELQ-----SNQECGLCYKCDEKFSPGHRCRKQELQVV 88
N +V V + E R++ + ELQ + G+C++CD +S H+C +EL+V+
Sbjct: 266 NLPEMVAVARSMETSVMRRVVQKELQLVKLDEKRRKGICFRCDGPWSKEHKCPNKELRVL 325
Query: 89 -LLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNK 147
++ +E E V +E + Q E+S +S +GL S T+K+ I
Sbjct: 326 TVINGFEMEVLESNSVEEE-------FHDSVAQFAELSFSSYMGLPSYTTIKMKGSICKG 378
Query: 148 KVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL---- 203
+ + + N + + L TG + G+C V + L
Sbjct: 379 EWC------HTQFYFPN---------------FHIRLGTGITVQGLGLCDKVTMTLPVGC 417
Query: 204 -QGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
Q +E+ F+ LDLG D+I+GI WL+TLG +NW+ H + F
Sbjct: 418 GQELELTTHFITLDLGPVDVILGIAWLRTLGDCKVNWERHELSF 461
>gi|78183245|emb|CAJ00275.1| hypothetical protein [Lotus japonicus]
Length = 1112
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 101/200 (50%), Gaps = 4/200 (2%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRC--RKQELQVVLLQEYEAEAQAVEDVGQERE 108
+KLT E+ ++ LC+ C EK++PGH C RK+ + + + +E+V QE
Sbjct: 287 KKLTPKEMDEHRTQNLCFFCHEKYTPGHDCPQRKKSQVFFMAVDGLESEELLEEVEQESR 346
Query: 109 LESKPTEGAKNQV--VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
LE + + N + +SL+++ G + ++L + K++ VL D+G++HNFI+ ++
Sbjct: 347 LEVNVPKVSLNALHGDSISLDALDGDSEYPMMRLTGWLGKKRIFVLIDTGSTHNFINQKL 406
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
I +P + + G + G C G+ +QG ++ + + L D+I+G+
Sbjct: 407 CHEGLSKIKCLQPVKITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILGM 466
Query: 227 HWLKTLGATHINWKTHSMKF 246
WL+ G ++ M+F
Sbjct: 467 QWLRQRGKISWDFTNLIMEF 486
>gi|147828709|emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]
Length = 1258
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++L E+ELQ+ +E GLC+KCDEKFSPGH +K EL+V+L+ E E E D G E
Sbjct: 370 KRLAESELQALREKGLCFKCDEKFSPGHHYKK-ELRVLLVHEDEEEEDNQFDGGTTEE-- 426
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKK 148
P+ VVE+SLNSVVGLT+ T+K+ I +K+
Sbjct: 427 --PSLIELKDVVELSLNSVVGLTTSGTMKIKGTIGSKE 462
>gi|78183249|emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 102/203 (50%), Gaps = 10/203 (4%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRC-RKQELQVVLLQEYEAEAQAVEDVGQEREL 109
+KLT E+ ++ LC+ C EK++PGH C ++++ QV + + E++ +E E
Sbjct: 287 KKLTPKEMDEHRTQNLCFFCHEKYTPGHDCPQRKKSQVFFM---AVDGLESEELLEEVEQ 343
Query: 110 ESKPTEGAKNQVV------EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFIS 163
ES+P + +SL+++ G + ++L + K++ VL D+G++HNFI+
Sbjct: 344 ESRPEVNVPKVSLNALHGDSISLDALDGDSEYPMMRLTGWLGKKRIFVLIDTGSTHNFIN 403
Query: 164 NEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
++ I +P + + G + G C G+ +QG ++ + + L D+I
Sbjct: 404 QKLCHEGLSKIKCLQPVKITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLI 463
Query: 224 MGIHWLKTLGATHINWKTHSMKF 246
+G+ WL+ G ++ M+F
Sbjct: 464 LGMQWLRQRGKISWDFTNLIMEF 486
>gi|78183243|emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 102/203 (50%), Gaps = 10/203 (4%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRC-RKQELQVVLLQEYEAEAQAVEDVGQEREL 109
+KLT E+ ++ LC+ C EK++PGH C ++++ QV + + E++ +E E
Sbjct: 287 KKLTPKEMDEHRTQNLCFFCHEKYTPGHDCPQRKKSQVFFM---AVDGLESEELLEEVEQ 343
Query: 110 ESKPTEGAKNQVV------EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFIS 163
ES+P + +SL+++ G + ++L + K++ VL D+G++HNFI+
Sbjct: 344 ESRPEVNVPKVSLNALHGDSISLDALDGDSEYPMMRLTGWLGKKRIFVLIDTGSTHNFIN 403
Query: 164 NEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
++ I +P + + G + G C G+ +QG ++ + + L D+I
Sbjct: 404 QKLCHEGLSKIKCLQPVKITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLI 463
Query: 224 MGIHWLKTLGATHINWKTHSMKF 246
+G+ WL+ G ++ M+F
Sbjct: 464 LGMQWLRQRGKISWDFTNLIMEF 486
>gi|240255473|ref|NP_189700.4| aspartyl protease family protein [Arabidopsis thaliana]
gi|332644137|gb|AEE77658.1| aspartyl protease family protein [Arabidopsis thaliana]
Length = 603
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Query: 121 VVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPY 180
+ +V S T K ++ I+ KVVV+ DSGA++NFIS+E+ LVLKLP + T
Sbjct: 267 IRQVKRQSTTEFTKGKDMRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQA 326
Query: 181 GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT--DIIMGIHWLKTLGATHIN 238
V+L + G C G+ L++Q VEI E+FL LDL T D+I+G + L +
Sbjct: 327 SVLLGQRQCIQTIGTCFGINLLVQEVEINENFLLLDLTKTDVDVILGYGGSQNLERQWLI 386
Query: 239 WKTHSMKF 246
W F
Sbjct: 387 WLNQDFSF 394
>gi|15042811|gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza sativa Japonica Group]
Length = 799
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Query: 47 GRG--FRKLTEAELQSNQEC-------GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEA 97
GRG +KL EL Q+ GLC+KC +K+ PGH C KQE + E + EA
Sbjct: 29 GRGGEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEEA 88
Query: 98 QAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGA 157
+ D + + +E + N +SL+++ G + ++L + +N+ ++VL DSG+
Sbjct: 89 IVLTDELLDAVTGLELSEDSAN----LSLHALAGTSHTNIVQLRALSSNQVLIVLVDSGS 144
Query: 158 SHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDL 217
SH+FI++ + L L P V + G +QG + L +
Sbjct: 145 SHSFINSALCHRLHLLSEPIPPTSVRVANGEVLVCDAKISQFDWWVQGHQFSFPVRVLPM 204
Query: 218 GITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQ 256
G D+++G+ WL +W ++F+ + ++ K Q
Sbjct: 205 GGYDLVLGMDWLTQYSPMTCDWAAKWLQFSYQGSLIKLQ 243
>gi|11994678|dbj|BAB02916.1| unnamed protein product [Arabidopsis thaliana]
Length = 546
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Query: 121 VVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPY 180
+ +V S T K ++ I+ KVVV+ DSGA++NFIS+E+ LVLKLP + T
Sbjct: 210 IRQVKRQSTTEFTKGKDMRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQA 269
Query: 181 GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT--DIIMGIHWLKTLGATHIN 238
V+L + G C G+ L++Q VEI E+FL LDL T D+I+G + L +
Sbjct: 270 SVLLGQRQCIQTIGTCFGINLLVQEVEINENFLLLDLTKTDVDVILGYGGSQNLERQWLI 329
Query: 239 WKTHSMKF 246
W F
Sbjct: 330 WLNQDFSF 337
>gi|18855070|gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Japonica Group]
gi|108711868|gb|ABF99663.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1087
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Query: 47 GRG--FRKLTEAELQSNQEC-------GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEA 97
GRG +KL EL Q+ GLC+KC +K+ PGH C KQE + E + EA
Sbjct: 317 GRGGEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEEA 376
Query: 98 QAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGA 157
+ D + + +E + N +SL+++ G + ++L + +N+ ++VL DSG+
Sbjct: 377 IVLTDELLDAVTGLELSEDSAN----LSLHALAGTSHTNIVQLRALSSNQVLIVLVDSGS 432
Query: 158 SHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDL 217
SH+FI++ + L L P V + G +QG + L +
Sbjct: 433 SHSFINSALCHRLHLLSEPIPPTSVRVANGEVLVCDAKISQFDWWVQGHQFSFPVRVLPM 492
Query: 218 GITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQ 256
G D+++G+ WL +W ++F+ + ++ K Q
Sbjct: 493 GGYDLVLGMDWLTQYSPMTCDWAAKWLQFSYQGSLIKLQ 531
>gi|116309424|emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
Query: 56 AELQSNQEC-GLCYKCDEKFSPGHRCRK-------QELQVVLLQEYEAEAQAVEDVGQER 107
A L+S + GLC+ C EK+ +C +EL L YE+E+
Sbjct: 341 AALKSYRRAKGLCFTCGEKWGKERKCASAIQLHVVEELLETLTLGYESES---------- 390
Query: 108 ELESKPTEGAKN-QVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
+ +S+ TE +++ ++ +S +V G S +T+KL I + ++++L DSG++H+FI +EV
Sbjct: 391 DPKSEDTEDSQHGTLLSISQQAVWGTESSRTIKLRGWIQDMELLMLVDSGSTHSFIDSEV 450
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
L L P V + G K +QG + F L LG DII+G+
Sbjct: 451 SLRLPGVHKLQTPLTVRIADGGTMKCTHEISSCNWWMQGNQFCNSFRVLPLGNYDIILGM 510
Query: 227 HWLKTLGATHINWKTHSMKF 246
WL+ ++W M+F
Sbjct: 511 DWLELFSPMQVDWANKWMEF 530
>gi|449455495|ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
Length = 1503
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 66/199 (33%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L++ E ++ + GLC++C+EK++PGHRC+ K+EL +++L E
Sbjct: 604 KRLSDTEFRARLDKGLCFRCNEKYAPGHRCKGREKRELMLLILNE--------------- 648
Query: 108 ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
E + K E +++ E+S+ D G
Sbjct: 649 EEDHKREEDTEDEASELSI---------------------------DPGTR--------- 672
Query: 168 LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
+GV + G+ + GIC+ V + L+ + IV DFL ++LG D+++G+
Sbjct: 673 ------------FGVTIGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQ 720
Query: 228 WLKTLGATHINWKTHSMKF 246
WL + G ++W + +M F
Sbjct: 721 WLDSTGTMKVHWPSLTMTF 739
>gi|242070717|ref|XP_002450635.1| hypothetical protein SORBIDRAFT_05g008466 [Sorghum bicolor]
gi|241936478|gb|EES09623.1| hypothetical protein SORBIDRAFT_05g008466 [Sorghum bicolor]
Length = 1507
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 16/202 (7%)
Query: 47 GRGFRKLTEAELQSNQECGLCYKCDEKFSPGHR--CRKQELQVVLLQEYEAEAQAVEDVG 104
G G R+L+ E+ + GLC+ C+EK++ GH CR+ + L+ E + A +DV
Sbjct: 338 GDGNRRLSPEEMAERRRLGLCFNCNEKYTRGHNRFCRR----IFFLEGVEID-NAPDDVA 392
Query: 105 QERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISN 164
P SL +V G+ T++ + +V L DSG++HNFIS
Sbjct: 393 AAEPDAEAPC---------FSLQAVAGVPVAGTMQPRVSLGAAILVALLDSGSTHNFISA 443
Query: 165 EVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIM 224
LP+ ++ G G+ R L++ GV D + L D+++
Sbjct: 444 AAARRSGLPLRQRPRLTALVANGERVTCDGVIRDAPLLIDGVTFPADLFVMPLAGYDVVL 503
Query: 225 GIHWLKTLGATHINWKTHSMKF 246
G WL LG + + M F
Sbjct: 504 GTRWLGALGPIVWDLSSRRMTF 525
>gi|115457202|ref|NP_001052201.1| Os04g0191000 [Oryza sativa Japonica Group]
gi|38346036|emb|CAE01900.2| OSJNBa0059D20.8 [Oryza sativa Japonica Group]
gi|113563772|dbj|BAF14115.1| Os04g0191000 [Oryza sativa Japonica Group]
Length = 1463
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHR--CRKQELQVVLLQEYEAEAQAVEDVGQERE 108
R+LT E+ GLC+ C+EKF+ GH CR+ + + ++DV E +
Sbjct: 264 RRLTPEEMAERCRQGLCFNCNEKFTRGHNRFCRRL---------FFVDGVEIDDVAIEGD 314
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
+ + SL++V G+ T++L + + ++ L D G++H+FI E
Sbjct: 315 AAAAAGDTEAPVF---SLHAVAGVPIADTIQLQVTVGDASLLALLDGGSTHSFIGEEAAR 371
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
LPI ++ I+ G G+ R + G D + L D+++G W
Sbjct: 372 RAGLPIQSSPRMTAIVANGERVACPGVIRDAAFTINGSTFHTDLFVMPLAGFDVVLGTRW 431
Query: 229 LKTLGATHINWKTHSMKF 246
L TLG ++ + SM F
Sbjct: 432 LGTLGPIVWDFTSRSMAF 449
>gi|18425247|gb|AAL69425.1|AC098565_7 Putative polyprotein [Oryza sativa]
gi|31430198|gb|AAP52144.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 848
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 31/203 (15%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++L+ AE+ + GLCY CDEK S +R+L
Sbjct: 288 KRLSPAEMAQRRSEGLCYNCDEKSS----------------------------ASQRKLR 319
Query: 111 SKPTEGAKN-QVVEVSLNSVVGLTSP--KTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
PT A +SL+++ G+ +P T+K+ + I +V L DSG++HNFIS+
Sbjct: 320 RTPTAHALTLDEPSISLHALAGVRTPTFNTIKVQARIGATDLVALLDSGSTHNFISDVAA 379
Query: 168 LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
++P+ V + G + G + + V DF L LG D+++G
Sbjct: 380 RRARVPLEPRHGLSVAVANGDRITSPGCFPSQRVTIGDHTFVIDFYALPLGGYDVVLGAQ 439
Query: 228 WLKTLGATHINWKTHSMKFNTRN 250
WL +LG T ++ S+ F + N
Sbjct: 440 WLGSLGPTLWDFAKQSLAFGSPN 462
>gi|218186024|gb|EEC68451.1| hypothetical protein OsI_36669 [Oryza sativa Indica Group]
Length = 554
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 10/183 (5%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
G C+KC EKF PGH+C+K +Q+ +L E Q ++ GQ E S ++ + +
Sbjct: 354 GECFKCGEKFGPGHKCQKA-VQLHVLDELLEVFQFSDEPGQVEESSS-------DEELLL 405
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYG-VI 183
S N++ G +T++L I N++V++L DSG+S +F+++ +V L L + N+ P V+
Sbjct: 406 SENALFGTEGKRTIRLQGLIGNQQVLILIDSGSSSSFMASHLVDRLHL-VPNSIPSALVM 464
Query: 184 LRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHS 243
+ G + V QG +F L LG D+I+G+ WL+ I+W +
Sbjct: 465 IVDGGKLFCDEMAEQVEWWCQGNTFSSNFKILGLGGYDLILGMDWLEAHSPMWIHWGRKT 524
Query: 244 MKF 246
++F
Sbjct: 525 VRF 527
>gi|3810596|gb|AAC69378.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 945
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 94 EAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLT 153
E + +AVE+ + E E KP E++L ++ G+ + T+++ + I+ +++ L
Sbjct: 285 ENDDEAVEE--ESTEAEGKP---------EITLYALEGVDTTSTIRVRATIHRNRLIALI 333
Query: 154 DSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFL 213
+SG++HNFI + V + L T T+P+ V + G + + +++ GV
Sbjct: 334 NSGSTHNFIGEKAVRGMNLKATTTKPFTVRVVNGMPLVCRSRYEAIPVVMGGVVFPVTLY 393
Query: 214 PLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
L L D+ MG+ WL TLG T NWK +++F+
Sbjct: 394 ALPLMGLDLAMGVQWLSTLGPTLCNWKEQTLQFH 427
>gi|31432119|gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 67 CYKCDEKFSPGHRCR-KQELQVVLLQEYEAEAQAVED-----VGQERELESKP--TEGAK 118
C+ C E + P H+C+ KQ + +L++ E+ + + E++ E P TE +
Sbjct: 430 CWFCKEPWFPRHQCKVKQAIHALLVENEESVEVEEDSVEEEEIKGEKQGEKLPEQTENVQ 489
Query: 119 NQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTE 178
+++ +S ++V GLT P T + ++N KK V L DSG++ F+ ++ + + + NT+
Sbjct: 490 EELMSISQSAVYGLTRPDTFSVMIKVNGKKAVGLVDSGSTTTFMDSKFAIKSQCTLENTK 549
Query: 179 PYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHIN 238
VI+ G K++ I G+ +QG F L L DII+G W+ ++
Sbjct: 550 MRKVIVAGGGELKSELIVPGMEYEIQGESFTNSFNLLSLERYDIILGADWIFKYSPITLD 609
Query: 239 WKTHSMK 245
+ MK
Sbjct: 610 LRKREMK 616
>gi|38346279|emb|CAE03982.2| OSJNBa0033H08.10 [Oryza sativa Japonica Group]
Length = 637
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 45/184 (24%)
Query: 53 LTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESK 112
LT E+QS E GLC+ CDEKF+PGHRC++ L Y A + E+
Sbjct: 415 LTPEEMQSQCEAGLCFNCDEKFTPGHRCKR------LFWLYAPSAD---------DNETN 459
Query: 113 PTEGAKNQVVEVSLNSVVGLTSP--KTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
P A++ +SL ++ G+ P +T++L IN K++V L DSG++HNFI+ +V
Sbjct: 460 PP-NAEDGDPGISLYAMAGVRLPGSETMQLHITINGKRLVALLDSGSTHNFINADVA--- 515
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLK 230
T+P ++ C G+ I+ DF L L +T I WL
Sbjct: 516 ------TDPSMLL----------SPC-------HGLRIIWDFTKLQLTLTRAGCQITWL- 551
Query: 231 TLGA 234
++GA
Sbjct: 552 SIGA 555
>gi|224114898|ref|XP_002332257.1| predicted protein [Populus trichocarpa]
gi|222832022|gb|EEE70499.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 33 FNSDRIVQVYPAH-----EGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQV 87
F+S RI P+ +G + +++ + ++ G C+KC +K+ PGHRC + L +
Sbjct: 189 FHSGRIPGNAPSKYFGPSRTKGVKPFSDSLYEQRKKLGQCFKCGDKYMPGHRCNSKGLHM 248
Query: 88 VLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVE--VSLNSVVGLTSPKTLKLASEIN 145
+ E + + E + +Q+ E +SLN++ + T+++
Sbjct: 249 IEGVEGGEDEEIGEFEDNMQ---------GTDQIDEYGLSLNALADNDTYNTIRIKGNCQ 299
Query: 146 NKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQG 205
+ +++L DSG++H+FI+ + L + T V + G+ + C +
Sbjct: 300 GQNLIILIDSGSTHSFINESTIKALNATTSKTTLLAVTVANGNVMLCEKHCPAFTWFMHN 359
Query: 206 VEIVEDFLPLDLGITDIIMGIHWLK 230
E + L+LG D+++G+ WLK
Sbjct: 360 YEFKSNLRVLELGRHDLVLGVDWLK 384
>gi|116309548|emb|CAH66611.1| H0211A12.14 [Oryza sativa Indica Group]
Length = 486
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 45/184 (24%)
Query: 53 LTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESK 112
LT E+QS E GLC+ CDEKF+PGHRC++ L Y A + E+
Sbjct: 264 LTPEEMQSQCEAGLCFNCDEKFTPGHRCKR------LFWLYAPSAD---------DNETN 308
Query: 113 PTEGAKNQVVEVSLNSVVGLTSP--KTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
P A++ +SL ++ G+ P +T++L IN K++V L DSG++HNFI+ +V
Sbjct: 309 PP-NAEDGDPGISLYAMAGVRLPGSETMQLHITINGKRLVALLDSGSTHNFINADVA--- 364
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLK 230
T+P ++ C G+ I+ DF L L +T I WL
Sbjct: 365 ------TDPSMLL----------SPC-------HGLRIIWDFTKLQLTLTRAGCQITWL- 400
Query: 231 TLGA 234
++GA
Sbjct: 401 SIGA 404
>gi|224108127|ref|XP_002333429.1| predicted protein [Populus trichocarpa]
gi|222836623|gb|EEE75016.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 33 FNSDRIVQVYPAH-----EGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQV 87
F+S RI P+ +G + +++ + ++ G C+KC +K+ PGHRC + L +
Sbjct: 189 FHSGRIPGNAPSKYFGPSRTKGVKPFSDSLYEQRKKLGQCFKCGDKYMPGHRCNSKGLHM 248
Query: 88 VLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVE--VSLNSVVGLTSPKTLKLASEIN 145
+ E + + E + +Q+ E +SLN++ + T+++
Sbjct: 249 IEGVEGGEDEEIGEFEDNMQ---------GTDQIDEYGLSLNALADNDTYNTIRIKGNCQ 299
Query: 146 NKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQG 205
+ +++L DSG++H+FI+ + L + T V + G+ + C +
Sbjct: 300 GQNLIILIDSGSTHSFINESTIKALNATTSKTTLLAVTVANGNVMLCETHCPAFTWFMHS 359
Query: 206 VEIVEDFLPLDLGITDIIMGIHWLK 230
E + L+LG D+++G+ WLK
Sbjct: 360 YEFKSNLRVLELGRHDLVLGVDWLK 384
>gi|19881623|gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Japonica Group]
Length = 954
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQA--VEDVGQERELESKPTEGAKNQVV 122
GLCY C EK+SP H+C +Q+ +QE Q+ + D G E + + G ++
Sbjct: 342 GLCYICAEKWSPIHKC-ANTIQLHAVQELLTVLQSDLLSDQGISDESDGLDSPG----LM 396
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
+S+ ++ G + +++ + K+V++L DSG++ +FIS+++ L+ +T P V
Sbjct: 397 SISVQAINGFETVGCMRMLGYVQGKEVLILVDSGSTASFISSKIAQTLQGVVTLEPPVQV 456
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
+ GS + QG D L+LG D+I+G+ WL ++W
Sbjct: 457 KVANGSILTCLTSVPRCEWMTQGWVFYTDLKVLNLGSYDMILGMDWLMAHSPMQVDW 513
>gi|21671877|gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1065
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQA--VEDVGQERELESKPTEGAKNQVV 122
GLCY C EK+SP H+C +Q+ +QE Q+ + D G E + + G ++
Sbjct: 406 GLCYICAEKWSPIHKC-ANTIQLHAVQELLTVLQSDLLSDQGISDESDGLDSPG----LM 460
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
+S+ ++ G + +++ + K+V++L DSG++ +FIS+++ L+ +T P V
Sbjct: 461 SISVQAINGFETVGCMRMLGYVQGKEVLILVDSGSTASFISSKIAQTLQGVVTLEPPVQV 520
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
+ GS + QG D L+LG D+I+G+ WL ++W
Sbjct: 521 KVANGSILTCLTSVPRCEWMTQGWVFYTDLKVLNLGSYDMILGMDWLMAHSPMQVDW 577
>gi|357143961|ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827899 [Brachypodium
distachyon]
Length = 1665
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
G C+KC +K+ PGH+C V L E E V V E + E + + + ++ +
Sbjct: 551 GECFKCGDKYQPGHKCAAS----VPLHMVE-ELLEVLQVSTESDTEQENEDSDSDSLMHL 605
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
S+ + G ++ K+++L + K+V++L DSG++ +FIS V +KL + V +
Sbjct: 606 SICATSGTSNKKSMRLQGVMEGKQVLILIDSGSNGSFISQAAVAAIKLQVQPVPAVVVTV 665
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
G QG +L D+I+G+ WL+ G I+W +
Sbjct: 666 ANGGKVSCDSAVPNATWTCQGHTFNSTLRVFNLPHYDMILGMDWLEACGKMWIDWPKKVL 725
Query: 245 KF 246
+F
Sbjct: 726 RF 727
>gi|32489310|emb|CAE03706.1| OSJNBa0060B20.14 [Oryza sativa Japonica Group]
Length = 3200
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLC+ C EK+ H+C +Q+ ++QE A Q + +E ++S + ++ +
Sbjct: 1770 GLCFTCGEKWGREHKC-ASSIQLHVVQELLAVLQGPDISSEEFIVQSD------DSLMAI 1822
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
S+ ++ G S +++L + +V++L DSG++H+F+ +++ L L + P V +
Sbjct: 1823 SIQAINGTESNHSIRLRGWLQGIEVLMLVDSGSTHSFVDHQLGLKLTGVKSMASPARVKV 1882
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
G + QG+ +F L LG D+I+G+ WL+ ++W +
Sbjct: 1883 ADGGHLNCSLYVNNCDWLTQGIHFKSNFRLLSLGTYDVILGMDWLEQFSPMKVDWVQKWL 1942
Query: 245 KF 246
+F
Sbjct: 1943 EF 1944
>gi|356514101|ref|XP_003525745.1| PREDICTED: uncharacterized protein LOC100809540 [Glycine max]
Length = 1232
Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 55/198 (27%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
R+LT E+ ++ GLCY CDE +C
Sbjct: 192 RRLTPEEMALKRDKGLCYHCDE------KC------------------------------ 215
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
LN++ G+ +P+T ++ + ++ +L D G++HNF+ V L
Sbjct: 216 ---------------LNALSGMPAPETFRVYGTVRRHQLTILVDGGSTHNFVQLRVAKFL 260
Query: 171 KLPITNTEPYGVILRTGSATKAQGICR--GVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
LP T P V++ G CR V + +QG + D L L D+++G+ W
Sbjct: 261 GLPSTPMTPLPVMVGDGGVIHCD--CRYPQVSITIQGHQFTTDLFGLPLSGADLVLGVQW 318
Query: 229 LKTLGATHINWKTHSMKF 246
L+ LG ++ SM F
Sbjct: 319 LRALGPVTTDYTALSMSF 336
>gi|147863509|emb|CAN79783.1| hypothetical protein VITISV_002632 [Vitis vinifera]
Length = 166
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 53 LTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESK 112
+T EL + GLC++ ++KF GH C++ + + + + + +E V + + + K
Sbjct: 1 MTTKELNEMRRKGLCFRYNDKFGLGHVCKRLFMIRATCNDSDDD-EKMEIVSEVHQEDVK 59
Query: 113 PTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKL 172
P E+SL+++ GL +P T++LA + + VL DS ++HNFIS VV + L
Sbjct: 60 P---------EISLHAIAGLKAPNTMRLAGSLFFHPMEVLIDSWSTHNFISVLVVERVGL 110
Query: 173 PITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDL 217
+ V++ +G + G C V L LQ V I +F L L
Sbjct: 111 NLKQDRKMEVMVASGEKLVSPGRCSNVQLKLQKVPIAVEFFILPL 155
>gi|242095940|ref|XP_002438460.1| hypothetical protein SORBIDRAFT_10g020018 [Sorghum bicolor]
gi|241916683|gb|EER89827.1| hypothetical protein SORBIDRAFT_10g020018 [Sorghum bicolor]
Length = 1437
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHR--CRKQELQVVLLQEYE-AEAQAVEDVGQER 107
++L+ E + GLCY C+E +S GH CR+ + + E A+ +AV D
Sbjct: 264 KRLSTEEQAERRRLGLCYNCNEPYSRGHNRVCRR----IFFIDGVELADDEAVPD----- 314
Query: 108 ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
+++P SL +V G+ T+++ + + + L D+G++HNFI+
Sbjct: 315 --DAEPAAPV------FSLRAVTGMPICDTMQVRVAVGDVTLTALLDTGSTHNFIAETAA 366
Query: 168 LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
LP+ + G G+ R +I+ G D L L D+++G
Sbjct: 367 TRTGLPVLADPRLTATVANGERIACPGVLRQAPIIIDGEGFCVDLYVLPLAGYDLVLGTQ 426
Query: 228 WLKTLGATHINWKTHSMKFNTRN 250
WL TLG ++ ++ F ++
Sbjct: 427 WLVTLGRIEWDFTARTLSFTRQD 449
>gi|110289541|gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1477
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLC+ C E++ H+C +Q+ ++QE Q D G++ ES P E V+ +
Sbjct: 355 GLCFTCGERWGRDHKC-ATAVQLHVVQELLEVLQG--DSGEDSPTESSP-EREDIIVMAI 410
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
S ++ G S +++L I ++++L DSG+SH+FI ++ + T+P V +
Sbjct: 411 SQQALNGTESRNSIRLRGWIQGTELLMLIDSGSSHSFIDEKIGKSMSGVKLLTKPLKVQI 470
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
G + QG DF + LG DII+G+ WL+ I W +
Sbjct: 471 ADGGELVCSQVIPNCSWWTQGHNFSNDFKLIPLGGYDIILGMDWLEQYSPMKIYWVNKWV 530
Query: 245 KFNTRN 250
+F +N
Sbjct: 531 EFQYQN 536
>gi|18568269|gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVG------QERELESKPTEGAK 118
GLC KC EK++PGH+C A+ A+E+V + E + P E A
Sbjct: 386 GLCDKCAEKWNPGHKCAA-----------TAQLHAMEEVWSLLVDEEVPESDLSPPEPAP 434
Query: 119 NQV-VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNT 177
Q+ V +S ++ G T +TLKL I N +++L DSG+SH F+++++ L+ +
Sbjct: 435 EQLFVTISKSAWTGSTGRQTLKLNGSIQNHPLLILIDSGSSHTFLNDQLRPHLQGVTSMA 494
Query: 178 EPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHI 237
V + G+ +Q D L L D+++G+ WL++ +
Sbjct: 495 STLQVQVANGAMVTCHYKLLQAQWQIQNCSFTSDVSFLPLPYYDMVVGMDWLESFSPMRV 554
Query: 238 NW 239
+W
Sbjct: 555 DW 556
>gi|307135885|gb|ADN33750.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
Length = 824
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 33/141 (23%)
Query: 77 GHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPK 136
GH +EL++ ++ A EDV E +L S+ + VVE+SLNSVVGLT+P+
Sbjct: 54 GHHYNNKELRLYVV------ADDWEDVEME-DLSSEEAMVEVSPVVELSLNSVVGLTAPR 106
Query: 137 TLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGIC 196
T KL E LKLPIT T YGVI+ + A + +G+C
Sbjct: 107 TFKLVDE--------------------------LKLPITETTNYGVIIGSRKAVQGRGMC 140
Query: 197 RGVGLILQGVEIVEDFLPLDL 217
+G + L + +EDFLP++L
Sbjct: 141 KGFTVGLPVMTTIEDFLPINL 161
>gi|307135777|gb|ADN33669.1| ty3-gypsy retroelement transposase [Cucumis melo subsp. melo]
Length = 710
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 54/84 (64%)
Query: 138 LKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICR 197
+K+ ++ N+ VVVL D A+HNFIS ++V L LP+ +T Y VIL G A K +GIC
Sbjct: 1 MKVKGKVKNEDVVVLIDCWATHNFISEKLVSDLNLPLKSTSSYKVILGLGVAIKGKGICG 60
Query: 198 GVGLILQGVEIVEDFLPLDLGITD 221
V ++L ++V+ LPL+LG D
Sbjct: 61 KVEVLLGDWKVVDSLLPLELGGVD 84
>gi|38345213|emb|CAD40196.2| OSJNBb0043H09.2 [Oryza sativa Japonica Group]
Length = 1409
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 65 GLCYKCDEKFSPGHRCRKQ-ELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVE 123
GLC+K E++ H+C +L VV E A++ +E + E A + ++
Sbjct: 363 GLCFKSGERWGKDHKCAASIQLHVV-----EELLNALQFNTEEEKFSGDIPETADDALMS 417
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV----VLVLKLPITNTEP 179
+S S+ G+ S +++L + ++++L DSG++H+F+ + + + LP +P
Sbjct: 418 ISYQSLNGIDSSTSIRLRGWVQGTELLMLVDSGSTHSFVDERIGSTFIGLKHLP----QP 473
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
V + G + +QG DF L LG D I+G+ WL+ I W
Sbjct: 474 LKVQIADGGQLSCSQVIPKCDWWIQGHNFSSDFRLLPLGSYDAILGMDWLQQFSPMQIEW 533
Query: 240 KTHSMKFNTRNTIGKNQ 256
++F+ + K Q
Sbjct: 534 NHKWLEFSHLGKVVKLQ 550
>gi|242085372|ref|XP_002443111.1| hypothetical protein SORBIDRAFT_08g008675 [Sorghum bicolor]
gi|241943804|gb|EES16949.1| hypothetical protein SORBIDRAFT_08g008675 [Sorghum bicolor]
Length = 1456
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHR--CRKQELQVVLLQEYEAEAQAVEDVGQERE 108
R+LT E+ + GLC+ C+EKFS GH C++ + E ++D E
Sbjct: 273 RRLTPEEMAERRRQGLCFNCNEKFSRGHNRFCKRL---------FFLEGVEIDDAQAEET 323
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
+ + + SL++V G++ +T+++ + + ++ L D+G++HNFI+
Sbjct: 324 DAAADAVAQEAPIF--SLHAVAGVSVGRTMQVRVRVGSTPLIALLDTGSTHNFIAETAAA 381
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
LPI + ++ G G+ + + + D + L D+++G W
Sbjct: 382 RSGLPIQSQPRLTAMVANGEKVPCPGVIKHAPIAIHDSVFAVDLFVMPLAGHDLVLGTQW 441
Query: 229 LKTLG 233
+ TLG
Sbjct: 442 MATLG 446
>gi|77552523|gb|ABA95320.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 584
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 8/167 (4%)
Query: 67 CYKCDEKFSPGHRCR-KQELQVVLLQEYEAEAQAVEDVGQER-------ELESKPTEGAK 118
C+ C E + P H+C+ KQ + +L++ + ++ ++ ++E+ EGA
Sbjct: 416 CWFCKEPWFPRHQCKVKQAINALLVENEPCTEEEEDESKEKEQEELATDQIEAPKQEGAH 475
Query: 119 NQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTE 178
+++ VS ++ G T P T + IN K+ V L DSG++ F+++E + K PI +
Sbjct: 476 EELMSVSFSAASGTTRPDTFSVLIMINGKQAVGLIDSGSTGTFMTHEFAVKCKCPIATST 535
Query: 179 PYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMG 225
VI+ G K+ + V +QGV+ V F + L D+I+G
Sbjct: 536 IKKVIVAGGGELKSNLVVPEVAYKIQGVKFVNAFSLITLKGYDVILG 582
>gi|38346427|emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]
Length = 1817
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDV---GQERELESKPTEGAKNQV 121
GLC+ C E++S H+C +Q+ ++QE Q V+ V E+ L + T + +
Sbjct: 526 GLCFTCGERWSRDHKC-STAVQLHVVQELLDALQDVKTVEVSDGEQFLHCEDT----SDL 580
Query: 122 VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYG 181
+ +S ++ G SP + +L + ++++L DSG++H+F+ + L L
Sbjct: 581 MAISQQAIWGTESPNSFRLRGWVQGTELLMLVDSGSTHSFMEESIGLKLAGVKPLRSKLS 640
Query: 182 VILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
V L G +QG + +F L+LG DII+G+ WL+ +NW
Sbjct: 641 VKLADGETLSCSYEVTNCRWWMQGHNFINNFRLLNLGGYDIILGMDWLEQFSPMQVNW 698
>gi|242033109|ref|XP_002463949.1| hypothetical protein SORBIDRAFT_01g009436 [Sorghum bicolor]
gi|241917803|gb|EER90947.1| hypothetical protein SORBIDRAFT_01g009436 [Sorghum bicolor]
Length = 1450
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHR--CRKQELQVVLLQEYEAEAQAVEDVGQERE 108
R+LT E+ + GLC+ C+EKFS GH C++ + L E ++D +
Sbjct: 332 RRLTPEEMAERRRQGLCFNCNEKFSRGHNRFCKR----LFFLDGVE-----IDDAPADET 382
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
+ + + SL+ V G++ +T+++ + + ++ L D+G++HNFI+
Sbjct: 383 EAAADAVAQEAPIF--SLHVVAGVSVGRTMRVRVRVGSTPLIALLDTGSTHNFIAETAAA 440
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
LPI + ++ G G+ + L + D + L D+++G W
Sbjct: 441 RSGLPIQSQPRLTAMVANGEKVPCPGVIKNAPLAIHDSVFAVDLFVMPLAGHDLVLGTQW 500
Query: 229 LKTLG 233
+ TLG
Sbjct: 501 MATLG 505
>gi|57834110|emb|CAE04775.3| OSJNBa0079C19.16 [Oryza sativa Japonica Group]
Length = 1002
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 65 GLCYKCDEKFSPGHRCRKQ-ELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVE 123
GLC+K E++ H+C +L VV E A++ +E + E A + ++
Sbjct: 678 GLCFKSGERWGKDHKCAASIQLHVV-----EELLNALQFNTEEEKFSGDIPETADDALMS 732
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV----VLVLKLPITNTEP 179
+S S+ G+ S +++L + ++++L DSG++H+F+ + + + LP +P
Sbjct: 733 ISYQSLNGIDSSTSIRLRGWVQGTELLMLVDSGSTHSFVDERIGSTFIGLKHLP----QP 788
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
V + G + +QG DF L LG D I+G+ WL+ I W
Sbjct: 789 LKVQIADGGQLSCSQVIPKCDWWIQGHNFSSDFRLLPLGSYDAILGMDWLQQFSPMQIEW 848
Query: 240 KTHSMKFNTRNTIGKNQ 256
++F+ + K Q
Sbjct: 849 NHKWLEFSHLGKVVKLQ 865
>gi|15451607|gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Japonica Group]
gi|108706172|gb|ABF93967.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1461
Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 46 EGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHR--CRKQELQVVLLQEYEAEAQAVEDV 103
+ R R+L +AE + + GLC+ CDEK+S GH C++ V+ V
Sbjct: 266 DNRPVRRLNQAEQEERRRLGLCFNCDEKYSRGHNKVCKRLFF--------------VDSV 311
Query: 104 GQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFIS 163
E E + A+ V SL++V G+ + L ++ +V L D+G++HNFI
Sbjct: 312 EDEDEEAPEDEVDAEAPVF--SLHAVAGVAVGHPILLRVQLGATTLVALVDTGSTHNFIG 369
Query: 164 NEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
L + + G G+ R + ++G+ D + L DI+
Sbjct: 370 ESAAARTGLSVQPRPRMTATVANGEKVACPGVLRHAPITIEGMPFHVDLYVMPLAGYDIV 429
Query: 224 MGIHWLKTLGATHINWKTHSMKFN 247
+G W+ LG + T ++ F+
Sbjct: 430 LGTQWMAKLGRMSWDVTTRALTFD 453
>gi|449522383|ref|XP_004168206.1| PREDICTED: uncharacterized protein LOC101227928 [Cucumis sativus]
Length = 690
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 77 GHRCRKQELQ---VVLLQEYEAEAQAVEDVGQERELESKPTEGAKN-QVVEVSLNSVVGL 132
G RC+ ++LQ + ++ E +E + +D+ + RE E+ + A E SLN V+G
Sbjct: 562 GTRCKAKKLQSMRMFVVDENGSEVEIFDDM-EPREEETIELQIAGVVDAAEFSLNLVMGF 620
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRT--GSAT 190
+S TLK+ I N++V+V D A+HNFI++ VV L+LP+ T + VI+ G+A
Sbjct: 621 SSSGTLKMKGIIENREVIVFIDCRATHNFIAHRVVDELELPLIETTHFRVIMGMGKGAAV 680
Query: 191 KAQGICRG 198
+ + ICRG
Sbjct: 681 RGKRICRG 688
>gi|147790727|emb|CAN70128.1| hypothetical protein VITISV_002403 [Vitis vinifera]
Length = 770
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 81/129 (62%), Gaps = 6/129 (4%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAV-EDVGQEREL 109
++LT E+Q + LC+ C++KF+ GHRC Q Q++LL+ + + + E+V E +
Sbjct: 202 KRLTWDEMQRRRAQRLCFNCNDKFTVGHRC--QGPQLLLLEGHTKTNEIMCEEVVDENSI 259
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
E++ + + ++ SL+ + G + P+T+++ ++I + ++ VL D ++HNF+S ++V +
Sbjct: 260 ENQHADLIEPKI---SLHVLTGWSIPRTMRIKAQIGHHEIKVLIDRRSTHNFLSAKMVEI 316
Query: 170 LKLPITNTE 178
L+L + T+
Sbjct: 317 LQLSVILTD 325
>gi|259490591|ref|NP_001159320.1| uncharacterized protein LOC100304412 [Zea mays]
gi|223943397|gb|ACN25782.1| unknown [Zea mays]
Length = 725
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQE-YEAEAQAVEDVGQERELESKPTEGAKNQVVE 123
GLC +C EK+ GH C +Q+ LQE +E + E+ G++ + + E + ++
Sbjct: 398 GLCDRCAEKWHRGHTC-NATVQLHALQEVWELLS---ENSGEDSSIHEQTLE--EPIIMA 451
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI 183
+S +V G ++ ++++ + K +++L DSG++H+FI+ V + P+ V
Sbjct: 452 ISAEAVTGSSAKRSMRFLGSMLGKDILILVDSGSTHSFINQSTVQHHTIVPVAATPFRVQ 511
Query: 184 LRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
+ G + +QG E +D L L D+I+G+ WL+ ++W+
Sbjct: 512 VANGGLLSCDKMIPHAVWSIQGCEFSQDLRVLPLPKFDLILGMDWLEFYSPMEVHWQ 568
>gi|242077302|ref|XP_002448587.1| hypothetical protein SORBIDRAFT_06g029685 [Sorghum bicolor]
gi|241939770|gb|EES12915.1| hypothetical protein SORBIDRAFT_06g029685 [Sorghum bicolor]
Length = 797
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHR--CRKQELQVVLLQEYEAEAQAVEDVGQERE 108
R+LT E+ + GLC+ +EKFS GH C++ + E ++D E
Sbjct: 332 RRLTPEEMAERRRQGLCFNYNEKFSRGHNRFCKRL---------FFLEGMEIDDAQAEET 382
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
+ + + SL++VVG++ +T+++ + + ++ L D+G++HNFI+
Sbjct: 383 DAAADAVAQEAPIF--SLHAVVGVSVGRTMQVRVRVGSTPLIALLDTGSTHNFIAETAAA 440
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
LPI + ++ G G+ + + + D + L D+++G W
Sbjct: 441 RSGLPIQSQPRLTAMVANGEKVPCLGVIKHAPIAIHDSVFAVDLFVMPLAGHDLVLGTQW 500
Query: 229 LKTLG 233
+ TLG
Sbjct: 501 MATLG 505
>gi|224123438|ref|XP_002330315.1| predicted protein [Populus trichocarpa]
gi|222871350|gb|EEF08481.1| predicted protein [Populus trichocarpa]
Length = 528
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 54 TEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQA--VEDVGQERELES 111
+++ + + G C+KC +K++PGHRC + L ++ E E + + ++D+ Q++ E
Sbjct: 326 SDSLFEQRKRLGQCFKCGDKYTPGHRCNTKGLHMIERVEEEEDEEVKELDDIMQDKCKER 385
Query: 112 KPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLK 171
+ + +SLN++ + T+++ + +++ SG++H+FI + L
Sbjct: 386 RLIDE-----FGLSLNALAENDTCNTIRIKGNCQGRDLIIFIVSGSTHSFIDEGTITELN 440
Query: 172 LPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLK 230
+ + T V + G+ + G +QG E + L L DI++G+ WLK
Sbjct: 441 VAKSKTMLLAVTVANGTVMLCEMQSPGFTWFMQGYEFKANLRVLKLDRHDIMLGVDWLK 499
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Query: 48 RGFRKLTEAELQSNQECGLCYKCDEKFSPG-HRCRKQELQVVLLQEYEAEAQAVEDVGQE 106
+G R + E+ + GLC+KC K+ P H+C ++ L+V++L E E + E V E
Sbjct: 922 KGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSLE 981
Query: 107 RELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
+ + E +V + + + T+K+ ++ N VVVL DSGA+HNFIS ++
Sbjct: 982 TQEVLEEEEEEIESECKV-IGVLGSMGEYNTMKIGGKLENIDVVVLVDSGATHNFISAKL 1040
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRG 198
L L IT + L G +QG+C+G
Sbjct: 1041 TSALGLTITPMAARKIKLGDGHEVLSQGVCKG 1072
>gi|218200076|gb|EEC82503.1| hypothetical protein OsI_26980 [Oryza sativa Indica Group]
Length = 471
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%)
Query: 115 EGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPI 174
+ +++ +SLN++ G T++L + + NK +++L DSG+SH+F+ +L L +
Sbjct: 20 DSDQDENCHISLNALSGANHVNTIRLRALVQNKVLLLLVDSGSSHSFLDYNFAQLLGLQL 79
Query: 175 TNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGA 234
P+ V + G Q + QG D + LG D I+G+ WL G
Sbjct: 80 QPIAPFLVKVANGDCIPCQFVVPQFTWWFQGRTFTYDMRVVPLGGHDAILGMDWLAQWGD 139
Query: 235 THINWKTHSMKFNTRNT 251
NW ++KF + T
Sbjct: 140 MSCNWAKKTLKFMYQGT 156
>gi|255583783|ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
gi|223527635|gb|EEF29747.1| conserved hypothetical protein [Ricinus communis]
Length = 462
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 26/150 (17%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQEREL 109
F++++ E+++ + GL Y+CD ++ PGHRC + L+++ + +E + + V Q +E+
Sbjct: 333 FKQMSHGEMEACRLKGLYYRCDGRYDPGHRCPNKSLKILCVINGSSEEEEMTKVEQSKEI 392
Query: 110 ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLV 169
PTE ++ +I ++ +++L DSGAS NFIS ++
Sbjct: 393 ---PTE-----------------------EVRGKIKSRDIIMLIDSGASRNFISEALLEK 426
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGV 199
+ L T+ + V + G + G+C+ V
Sbjct: 427 IGLTRLPTKSFKVQMGNGDEIDSTGVCKSV 456
>gi|108862641|gb|ABG22014.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1422
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 7/189 (3%)
Query: 67 CYKCDEKFSPGHRCR-KQELQVVLLQEYEAEAQAVEDVGQ------ERELESKPTEGAKN 119
C+ C E + P H+C+ KQ L +LL++ E E E G+ ++ +G +
Sbjct: 340 CWFCKEPWFPRHQCKVKQALHALLLEDEEVEENTEEKNGEVDLTEENDDMADTEEKGKEE 399
Query: 120 QVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+++ VSLN++ G + P T + IN +K V L DSG++ F+ E + + P+ N+E
Sbjct: 400 ELMFVSLNALQGTSRPDTFLVIILINGRKAVGLIDSGSTSTFMDQEFAIKSQCPLKNSEV 459
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
V++ G +++ + ++QG + F + L DII+G W+ A +
Sbjct: 460 KKVVVARGGELRSEVQVPEIQYVIQGEQFSNPFNLIPLKGYDIILGADWIFQYSAITLYL 519
Query: 240 KTHSMKFNT 248
K ++ T
Sbjct: 520 KKRILEITT 528
>gi|108864085|gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 7/185 (3%)
Query: 67 CYKCDEKFSPGHRCR-KQELQVVLLQEYEAEAQAV---EDVGQER---ELESKPTEGAKN 119
C+ C E + PGH+C+ K+ L +LL+E E E E QE+ E E P E +
Sbjct: 259 CWFCKEAWFPGHQCKVKKALNALLLEEEEYEGTEEVGREKKAQEKVLEETEHAPEEIDQE 318
Query: 120 QVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+++ VS N++ G T P T + +IN ++ V L DSG+ F+ E + P+ +T+
Sbjct: 319 ELMYVSQNAMQGATRPDTFSVIIQINGRRAVGLVDSGSPSTFMDQEYAIRNDCPLVSTDS 378
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
V++ G K++ + +QG F + L DII+G W+ ++
Sbjct: 379 KKVVVAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYDIILGADWIYKYSPITLDL 438
Query: 240 KTHSM 244
K +
Sbjct: 439 KKREL 443
>gi|297604112|ref|NP_001055003.2| Os05g0241900 [Oryza sativa Japonica Group]
gi|255676164|dbj|BAF16917.2| Os05g0241900 [Oryza sativa Japonica Group]
Length = 578
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 9/231 (3%)
Query: 31 GGFNSDRIVQVYPAHEGRGFRKLTEAELQSNQ-ECGLCYKCDEKFSPGHRCR-KQELQVV 88
G FN +R ++GR + + ++ E C+ C E + P H+C+ KQ + +
Sbjct: 254 GNFNRNRNQNPLGGNQGRNANHRGQNRGEGDRREEKKCWFCKEPWFPRHQCKIKQAIHAL 313
Query: 89 LLQEYEAEAQAVEDVGQERELE-------SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLA 141
L ++ E + + G + E + + E +++ +S +V G + P T +
Sbjct: 314 LEEDDGQEDKETSNTGGDEEEKKETEESATSENESPTEELMYISQTAVQGTSRPDTFSVL 373
Query: 142 SEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGL 201
+IN + V L DSG++ F+ + L P+ NT+ V++ G K + +
Sbjct: 374 IKINGRTAVGLVDSGSTTTFMDQDYALRNYYPLKNTDTKKVVVAGGGELKTDVMVPDISY 433
Query: 202 ILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTI 252
+QG F L L DII+G W+ ++ K + N +
Sbjct: 434 EIQGECFTNQFKLLPLKGYDIILGADWIYNYSPISLDLKQRILGITKGNKV 484
>gi|52353389|gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1263
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLCY C EK+SP H+C +Q+ +QE A ++V +++ +E + + ++ +
Sbjct: 400 GLCYLCAEKWSPTHKCSG-TVQLHAVQELFALFP--DNVNEDQA--GISSEDSDSSLLAM 454
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
S+++V G S T++L +I +++L DSG+S +F+S+++ L P V +
Sbjct: 455 SVHAVQGTDSQSTIRLQGKIQGLNILMLVDSGSSASFVSDQLADRLTGVQFLAHPLSVKV 514
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
G Q + G + + F + LG D I+G+ WL HI+W+ S+
Sbjct: 515 ANGQVLHCQKEMPSAEWFVSGQKFLTTFKVVALGGYDAILGMDWLTKYSPMHIDWQLKSI 574
>gi|215707240|dbj|BAG93700.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 535
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 17/195 (8%)
Query: 65 GLCYKCDEKFSPGHRCRK-------QELQVVLLQEYEAEAQAVEDVGQERELESKPTEGA 117
GLCY C EK+SP H+C QEL VL +EA +AV E + S
Sbjct: 332 GLCYICAEKWSPTHKCANTVQLHAVQELFSVL---HEACDEAV--CNPENSVLSD----- 381
Query: 118 KNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNT 177
++ +S+++V G + +++ +I K V +L DSG++ +FIS V L
Sbjct: 382 SQVLMAISVHAVQGSEASGCMRMLGQIQGKDVFILVDSGSTASFISARVAEGLSELSQIA 441
Query: 178 EPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHI 237
V + G+ Q QG + L LG D+I+G+ WL +
Sbjct: 442 TNLQVKVADGATLHCQSEIPACEWSTQGQKFCTTLKILPLGNYDMILGMDWLMQHSPMTV 501
Query: 238 NWKTHSMKFNTRNTI 252
NW T S+ RN +
Sbjct: 502 NWVTKSLTIEGRNPV 516
>gi|449490958|ref|XP_004158759.1| PREDICTED: uncharacterized protein LOC101229900 [Cucumis sativus]
Length = 1408
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L +AE Q+ +E GLC++C+EK+ GHRCR ++EL++ +++E E E E
Sbjct: 1316 KRLPDAEFQARKEKGLCFRCNEKYFHGHRCRGREQRELRMYVVKEDEEYEIVEEAEWDET 1375
Query: 108 ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLK 139
EL +VE+S+NSVVGLT+P T+K
Sbjct: 1376 ELNCVEINPEDQAIVELSINSVVGLTNPGTMK 1407
>gi|32492359|emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 67 CYKCDEKFSPGHRCR-KQELQVVLLQEYEAEAQAV--------EDVGQERELESKPTEGA 117
C+ C E + P H+C+ K+ L +L++ E + + ED E+E E+ P +
Sbjct: 408 CWFCKEPWFPKHQCKVKKALNALLMEGEEGKDEGEEGELTGNQEDCKLEKE-EAPPDDEN 466
Query: 118 KNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNT 177
+ +++ VS N+V G T P T + +IN ++ V L DSG++ F+ + + P+ +T
Sbjct: 467 QEELMFVSHNAVYGTTRPDTFSVIIQINGRRAVGLVDSGSTSTFMDQDYAVRNHCPLVST 526
Query: 178 EPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHI 237
+ V++ G K++ + +QG F + L D+I+G W+ +
Sbjct: 527 DAKKVVVAGGGELKSEVQVPELVYQIQGETFSNKFNIIPLKGYDVILGADWIYKYSPITL 586
Query: 238 NWKTHSM 244
+ K +
Sbjct: 587 DLKKREL 593
>gi|10140673|gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLC+ C EK+ H+C V L E A++ +E E ++ ++ +
Sbjct: 370 GLCFVCGEKWGRDHKCAT----TVQLHVVEELINALKTDPEENCNSEGAPESEEDSLMAI 425
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
S ++ G S K+++L + N ++++L DSG++H+FI ++ L + V +
Sbjct: 426 SFQALNGTDSSKSIRLRGWVQNTELLMLVDSGSTHSFIDAKLGAQLCGLQKLNQAIKVQV 485
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
GS QG DF L LG D I+G+ WL+ ++W
Sbjct: 486 ADGSQLFCDSFLPNCSWWSQGHSFTSDFRLLPLGSYDAILGMDWLEQFSPMQVDW 540
>gi|38346992|emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa Japonica Group]
Length = 1629
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQE-YEAEAQAVEDVGQERELESKPTEGAKNQVVE 123
GLCY C EK+SP H+C +Q+ +QE + ++VED S + ++
Sbjct: 411 GLCYICAEKWSPTHKC-SNTVQLHAVQELFTVLHESVEDG------LSTTDHVVEQTLMA 463
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI 183
VSL +V G + +++ +I K++++L DSG+S +FIS V L + V+
Sbjct: 464 VSLQAVQGTETGGCMRMLGQIQGKEILILVDSGSSASFISKRVASSLMGVLEQPVHVQVM 523
Query: 184 LRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHS 243
+ G+ +QG + L+L D+I+G+ WL ++W T S
Sbjct: 524 VAGGAKLHCCSEILNCEWTIQGHVFFTNLKVLELNNYDMILGMDWLMQHSPMTVDWTTKS 583
Query: 244 M 244
+
Sbjct: 584 L 584
>gi|53981172|gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 9/231 (3%)
Query: 31 GGFNSDRIVQVYPAHEGRGFRKLTEAELQSNQ-ECGLCYKCDEKFSPGHRCR-KQELQVV 88
G FN +R ++GR + + ++ E C+ C E + P H+C+ KQ + +
Sbjct: 254 GNFNRNRNQNPLGGNQGRNANHRGQNRGEGDRREEKKCWFCKEPWFPRHQCKIKQAIHAL 313
Query: 89 LLQEYEAEAQAVEDVGQEREL-------ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLA 141
L ++ E + + G + E + E +++ +S +V G + P T +
Sbjct: 314 LEEDDGQEDKETSNTGGDEEEKKETEESATSENESPTEELMYISQTAVQGTSRPDTFSVL 373
Query: 142 SEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGL 201
+IN + V L DSG++ F+ + L P+ NT+ V++ G K + +
Sbjct: 374 IKINGRTAVGLVDSGSTTTFMDQDYALRNYYPLKNTDTKKVVVAGGGELKTDVMVPDISY 433
Query: 202 ILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTI 252
+QG F L L DII+G W+ ++ K + N +
Sbjct: 434 EIQGECFTNQFKLLPLKGYDIILGADWIYNYSPISLDLKQRILGITKGNKV 484
>gi|57863925|gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 2108
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLCY C EK+SP H+C +Q+ +QE A D E + +E + + ++ +
Sbjct: 1100 GLCYLCAEKWSPTHKC-SGTVQLHAVQELFA---LFPDNANEDQASIS-SEDSDSSLLAM 1154
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
S+++V G S T++L +I +++L DSG+ +FIS+++ L P V +
Sbjct: 1155 SVHAVQGTDSQSTIRLQGKIQGLNILMLVDSGSLASFISDQLADRLTGVQFLAHPLSVKV 1214
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
G Q + G + + F + LG D I+G+ WL I+W+ S+
Sbjct: 1215 ANGQVLHCQKEMPSAEWFVSGQKFLTTFKVVALGGYDAILGMDWLTKYSPMQIDWQLKSI 1274
>gi|297613085|ref|NP_001066669.2| Os12g0428300 [Oryza sativa Japonica Group]
gi|255670262|dbj|BAF29688.2| Os12g0428300 [Oryza sativa Japonica Group]
Length = 545
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 17/138 (12%)
Query: 52 KLTEAELQSNQEC-------GLCYKCDEKFSPGHRCRKQE---LQVVLLQEYEAEAQAVE 101
KL EL Q+ GLC+KC EK++PGH C KQE L+ + +QE E++ +
Sbjct: 330 KLAPGELWKAQQLKEYRRAQGLCFKCGEKYAPGHVCAKQEGVQLKALHVQE---ESEVLS 386
Query: 102 DVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNF 161
D L++ + + +SL+++ G T++L + + N+ +++L DSG++H+F
Sbjct: 387 D----EVLDAITALDVSSDSISLSLHAMAGTCPSHTVQLRALVQNQVIIILVDSGSTHSF 442
Query: 162 ISNEVVLVLKLPITNTEP 179
I + L+L + +P
Sbjct: 443 IDAGLCHRLQLSTESIQP 460
>gi|108862706|gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2202
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 19/191 (9%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVE-DVGQERELESKPTEGAKNQVVE 123
GLCY C EK+S H+C +Q+ +QE A Q + D G +++P + +
Sbjct: 681 GLCYLCAEKWSLSHKC-SSSVQLNAVQEVFALLQQNDSDSGDSSGEDTEP-----HSLFS 734
Query: 124 VSLNSVVGLTSPKTLK----LASEINNKKVVVLTDSGASHNFISNEVVL----VLKLPIT 175
+S++++ G T+ +T++ L I +++L DSG+S +FIS V+ +++LP++
Sbjct: 735 LSVHAIQGTTTAQTMRQTMRLQGIIQGYDILILVDSGSSCSFISLSVMPQLSNLIQLPVS 794
Query: 176 NTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGAT 235
+ V + G + V +QG L L D+I+G+ WL+
Sbjct: 795 ----FQVKVANGQMLSCETELANVSWSVQGHHFCSALKVLPLQSYDMILGMDWLERYSPM 850
Query: 236 HINWKTHSMKF 246
I+W+ +++F
Sbjct: 851 DIDWQQKTIRF 861
>gi|77551464|gb|ABA94261.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1369
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 34/184 (18%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLCY C EK+SP H+C +Q+ +QE ++ +
Sbjct: 318 GLCYLCAEKWSPTHKC-ANTVQLHAVQELFT-------------------------IMAI 351
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNE----VVLVLKLPITNTEPY 180
S++++ G ++++ +I K++++L DSG++ +FIS + +V V LP
Sbjct: 352 SVHAMRGSEHRGSMRMLGQIQGKEILILVDSGSTASFISKKLAAGLVGVQGLPTK----V 407
Query: 181 GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
V + G+ Q + + + QG DF L LG D+I+G+ WL ++W
Sbjct: 408 QVKVADGAVLHCQSVIQNCEWVSQGHMFCTDFKVLALGNYDVILGMDWLMQHSPMTVDWS 467
Query: 241 THSM 244
T ++
Sbjct: 468 TRTL 471
>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
Length = 1426
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 68/127 (53%)
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI 183
+SL ++ G+ +T++ IN +++ L DSG++HNFI+ E++ + L + V
Sbjct: 1259 ISLLALTGIRKAQTMQPPVLINGIQLMALVDSGSTHNFIAAELIDKVGLKLAPRTGLSVA 1318
Query: 184 LRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHS 243
+ G+ G+C + + V D L + LG DI++G+ WL++LG ++ +
Sbjct: 1319 VANGNKITCGGVCYTTPISIDHEHFVLDLLTIPLGGFDIVLGVQWLRSLGPITWDFSNLT 1378
Query: 244 MKFNTRN 250
M+ + ++
Sbjct: 1379 MRLHRQD 1385
>gi|108864659|gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2811
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLCY C EK+SP H+C +Q+ +QE + A DV E + + + ++ +
Sbjct: 1745 GLCYVCAEKWSPTHKC-SGSVQLHAVQELFSVLAA--DVS-----EGEQDADSTSSLMAI 1796
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
SL ++ G S TL+L I V++L DSG+S +F+S+ V+ L + P V +
Sbjct: 1797 SLQAIQGTVSAHTLRLQGSIQGFDVLILVDSGSSCSFLSSVVLPHLTGVKSLLTPVQVKV 1856
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
G+ +QG + DF L L D+I+G+ WL+ INW+ ++
Sbjct: 1857 ANGAVLSCTSELPAAKWEVQGHQFSTDFKLLPLDNYDMILGMDWLEKYSPMDINWQAKTI 1916
Query: 245 KF 246
+F
Sbjct: 1917 QF 1918
>gi|147802351|emb|CAN77123.1| hypothetical protein VITISV_013625 [Vitis vinifera]
Length = 439
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%)
Query: 134 SPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQ 193
+P TL++ + NK + VL D +HNFI VV L + + V++ +
Sbjct: 271 NPPTLRVLGRLKNKYLTVLIDDNNTHNFIDQIVVSRFGLLVVREKKIQVVVANQEWIECM 330
Query: 194 GICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
G G+ LI+Q + + D+ L + +++G+ WL+TLG+ ++K +M F
Sbjct: 331 GQFLGLTLIIQEIPVTADYYILPMAACQVVLGVQWLETLGSIESDYKALTMSF 383
>gi|62733109|gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 69 KCDEKFSPGHRCR-KQELQVVLLQEYEAEAQAV---EDVGQER---ELESKPTEGAKNQV 121
K DE + PGH+C+ K+ L +LL+E E E E QE+ E E P E + ++
Sbjct: 363 KHDEAWFPGHQCKVKKALNALLLEEEEYEGTEEVGREKKAQEKVLEETEHAPEEIDQEEL 422
Query: 122 VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYG 181
+ VS N++ G T P T + +IN ++ V L DSG+ F+ E + P+ +T+
Sbjct: 423 MYVSQNAMQGATRPDTFSVIIQINGRRAVGLVDSGSPSTFMDQEYAIRNDCPLVSTDSKK 482
Query: 182 VILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKT 241
V++ G K++ + +QG F + L DII+G W+ ++ K
Sbjct: 483 VVVAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYDIILGADWIYKYSPITLDLKK 542
Query: 242 HSM 244
+
Sbjct: 543 REL 545
>gi|170660047|gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%)
Query: 132 LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATK 191
L +T++L + N+++ +L DSG++HNF+ V L N V + G+
Sbjct: 6 LPDYRTMRLCGTVKNRRIHILIDSGSTHNFLDAAVAAKLGCCAENIPAVNVTVADGNKLI 65
Query: 192 AQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+ CR +QG+E + L L L D+++G+ WLK LG ++ M+F
Sbjct: 66 SSSTCRAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDFSKLRMEFQ 121
>gi|38345562|emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]
Length = 1575
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQE-YEAEAQAVEDVGQERELESKPTEGAKNQVVE 123
GLCY C EK+SP H+C +Q+ +QE + A V D Q+ + + + ++
Sbjct: 431 GLCYVCAEKWSPTHKC-SGPVQLHAVQELFSVLAADVSDGEQDAD--------STSSLMA 481
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI 183
+SL ++ G S TL+L I V++L DSG+S +F+S+ V+ L + P V
Sbjct: 482 ISLQAIQGTVSAHTLRLQGSIQGFDVLILVDSGSSCSFLSSVVLPHLTGVKSLLTPIQVK 541
Query: 184 LRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHS 243
+ G+ +QG + +F L L D+I+G+ WL+ INW+ +
Sbjct: 542 VANGTVLYCTSELPAAKWEVQGHQFSTNFKLLPLDNYDMILGMDWLEKYSPMDINWQAKT 601
Query: 244 MKF 246
++F
Sbjct: 602 IQF 604
>gi|108864565|gb|ABA94541.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1347
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
G C+KC EKF PGH+C K +Q+ +L E Q ++ GQ E S ++ + +
Sbjct: 351 GECFKCGEKFGPGHKCPK-AVQLHVLDELLEVFQFSDEPGQVEESSS-------DEELLL 402
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYG-VI 183
S N++ G +T+ L I ++V++L DSG+S +F+++ +V L L + N+ P V+
Sbjct: 403 SENALFGTEGKRTIWLQGLI--QQVLILIDSGSSSSFMASHLVDRLHL-VPNSIPSALVM 459
Query: 184 LRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
+ G + V QG +F L LG D+I+G+ WL+ I+W
Sbjct: 460 IIDGGKLFCDEMAEQVEWWCQGNTFSSNFKILGLGGYDLILGMDWLEAHSPMWIHW 515
>gi|32483242|emb|CAE02543.1| OSJNBb0069N01.1 [Oryza sativa Japonica Group]
gi|38344504|emb|CAE05183.2| OSJNBa0013A04.20 [Oryza sativa Japonica Group]
Length = 1395
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 16/210 (7%)
Query: 43 PAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHR--CRKQELQVVLLQEYEAEAQAV 100
P R R+L+ E+ + GLC+ CDE +S GH CR+ + L+ E +A
Sbjct: 312 PPAVNRAIRRLSPLEMDERRRQGLCFNCDEPYSRGHNRVCRR----LFFLEMGEDDADT- 366
Query: 101 EDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHN 160
+S A + +SL+ G+ + + + + + L DSG++
Sbjct: 367 ---------DSTDDPAAAPATLRISLHVATGVRVSDAMHIMVHLGDTDLYALIDSGSTPT 417
Query: 161 FISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT 220
F+S + + V + G G+ + + G E D L LG
Sbjct: 418 FLSQDAAARVGRDPQPRSGLNVTVANGDKVACPGVFPDMPFQIAGEEFATDVYVLTLGGY 477
Query: 221 DIIMGIHWLKTLGATHINWKTHSMKFNTRN 250
D+++G WL TLG ++ +M F R+
Sbjct: 478 DLVLGTQWLATLGPILWDFTALTMSFWHRD 507
>gi|225016150|gb|ACN78974.1| retrotransposon protein [Glycine max]
gi|225016158|gb|ACN78981.1| retrotransposon protein [Glycine max]
Length = 1261
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 38/204 (18%)
Query: 43 PAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVED 102
PA F+ L+ EL +E GLC+ DEK+S GH+C V E + ++D
Sbjct: 357 PATTTIPFKCLSPEELAIRREKGLCFNYDEKYSRGHKCTPSLFLFVTEDE-----ECLQD 411
Query: 103 VGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFI 162
S PT +Q TSP + L + L+ GA F+
Sbjct: 412 SDSN---PSSPTALVASQE-----------TSPAQISLHA---------LSGHGAPETFL 448
Query: 163 SNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDI 222
+ L++ + N G + +C V + +Q + DF L + D+
Sbjct: 449 QPQTTSTLRVTVGN----------GEELQCNQVCPEVAVHIQAHTFLVDFHILPICGADV 498
Query: 223 IMGIHWLKTLGATHINWKTHSMKF 246
++G+ WLK+LG ++ T +MKF
Sbjct: 499 VLGVQWLKSLGPVLTDYATLTMKF 522
>gi|440577377|emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis]
Length = 1655
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 11/109 (10%)
Query: 66 LCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAK---NQVV 122
LC+ CDEK++ HRC +Q+ L+QE + ++ Q+ LE P+EG N+V+
Sbjct: 325 LCHICDEKWNREHRC-GPTVQLHLVQE-------MWELVQDPNLEPTPSEGGTSQGNEVL 376
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLK 171
+S+ +V G SPKT++L + +V++L DSG++H+F+ + LK
Sbjct: 377 AISVAAVKGGESPKTVRLKGIVQGMEVLILIDSGSTHSFVGEALANKLK 425
>gi|217073570|gb|ACJ85145.1| unknown [Medicago truncatula]
gi|388517775|gb|AFK46949.1| unknown [Medicago truncatula]
Length = 185
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 65 GLCYKCDEKFSPG-HRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVE 123
GLC+KC K+ P H+C ++ L+V++L E E + E V E + + E +
Sbjct: 8 GLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSLETQEVLEEEEEEIESECK 67
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI 183
V + + + T+K+ ++ N VVVL DSGA+HNFIS ++ L L IT +
Sbjct: 68 V-IGVLGSMGEYNTMKIGGKLENIDVVVLVDSGATHNFISAKLTSALGLTITPMAARKIK 126
Query: 184 LRTGSATKAQGICRG 198
L G +QG+C+G
Sbjct: 127 LGDGHEVLSQGVCKG 141
>gi|449524808|ref|XP_004169413.1| PREDICTED: uncharacterized protein LOC101228880 [Cucumis sativus]
Length = 1099
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 8/90 (8%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAV------EDVG 104
++L++AE Q+ +E GLC+KCDEK+ GH+C+ ++L+ LQ + A V ED
Sbjct: 413 KRLSDAEFQAKREKGLCFKCDEKYYSGHKCKVEDLRE--LQMFVVRADNVEEEIFEEDEY 470
Query: 105 QERELESKPTEGAKNQVVEVSLNSVVGLTS 134
++REL+ +G VVE+ +NSVVGL++
Sbjct: 471 EQRELKVMEVQGNIEGVVELCINSVVGLST 500
>gi|115487072|ref|NP_001066023.1| Os12g0121200 [Oryza sativa Japonica Group]
gi|113648530|dbj|BAF29042.1| Os12g0121200, partial [Oryza sativa Japonica Group]
Length = 461
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 137 TLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGIC 196
T+K+ + + ++++V L DSG++HNFI++ + +P+ V + G + G C
Sbjct: 1 TIKVWARLGSQELVALLDSGSTHNFINDAIAHQAGVPLQRRPGLSVAVANGDRVPSPGRC 60
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
+ + E DF L LG DI++G WL TLG T ++ S+ F
Sbjct: 61 PPQRVSIGSHEFDIDFYALPLGGYDIVLGAQWLGTLGPTLWDFSRQSLAF 110
>gi|9294238|dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana]
Length = 904
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
++ +N+V G++ T+++ +NK + +L DSG++ NFI + + L + T V
Sbjct: 219 QIFVNAVSGISDYTTMRVKGMYDNKILFILIDSGSTFNFIDSTMAKKLGCKVEPTGLTRV 278
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTH 242
+ G + G LQ D L + L + D+++G+ WL TLG ++
Sbjct: 279 SVADGRKLRVDGKITDFTWKLQTTSFASDILMIPLQVIDMVLGVQWLATLGRISWEFQKF 338
Query: 243 SMKFNTRN 250
M+F +N
Sbjct: 339 EMRFKYKN 346
>gi|147822176|emb|CAN68077.1| hypothetical protein VITISV_042019 [Vitis vinifera]
Length = 480
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 68 YKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLN 127
+ CDEK+ H+C++ L E+EA +A D+ ++ + VS+N
Sbjct: 171 FVCDEKYELVHKCKQNFLLDGHESEWEAICEAENDIKEDDLM--------------VSIN 216
Query: 128 SVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTG 187
++ GL S +T+++ I K V++ D ++ NF+ V + I T P + G
Sbjct: 217 AIFGLASHQTMRIHGNIKKKVVIIXIDLRSTXNFLDLVVXKRTRCLIQITNPMKAAVVDG 276
Query: 188 SATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
+ + R +QG E D + LG D+++GI WL LG ++K KF
Sbjct: 277 TRITSDATYRQSTWNMQGKEFQVDLRLIPLGGYDMVLGIQWLAELGPILWDFKNLRXKF 335
>gi|38347240|emb|CAE05433.2| OSJNBa0059H15.4 [Oryza sativa Japonica Group]
Length = 407
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 25/144 (17%)
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
++S E ++ ++ +SL ++ G S + ++ I +V++L DSG+SH+F+ +V
Sbjct: 56 VDSYELEVEESNLMALSLQAISGTESATSFRIKGCIQGTEVLMLIDSGSSHSFLDTQV-- 113
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGI--CRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
A K QG+ + V L ++GV DF L LG+ D+I+G+
Sbjct: 114 --------------------AHKFQGVQPLQKV-LSVKGVGFHTDFKLLSLGVYDVILGM 152
Query: 227 HWLKTLGATHINWKTHSMKFNTRN 250
WL TLG +I+W M++ N
Sbjct: 153 DWLVTLGTMNIDWAAKWMEYQLGN 176
>gi|77551120|gb|ABA93917.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1091
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 19/110 (17%)
Query: 65 GLCYKCDEKFSPGHRCRK-------QELQVVLLQEYEAEAQAVEDVGQERELESKPTEGA 117
GLCY C EK+SP H+C QEL L Q E+E A E+ + E ES
Sbjct: 263 GLCYICAEKWSPTHKCANSVQLHSVQEL-FALFQHQESELLAPEE---QHEQES------ 312
Query: 118 KNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
Q++ +SL ++ + S T++L + K+V++L DSG+S NF+S+++
Sbjct: 313 --QLMAISLQAIQRIESAGTMRLLGSLQGKEVLILVDSGSSANFMSSKMA 360
>gi|147806355|emb|CAN67624.1| hypothetical protein VITISV_037284 [Vitis vinifera]
Length = 921
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 154 DSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFL 213
D G++HNFI +V LPI + + V++ G+C V + +QG I D+
Sbjct: 209 DGGSTHNFIDQAIVTXHGLPIIPAKKFQVMVANXEKIXCVGLCPTVTISIQGKSITADYY 268
Query: 214 PLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
L + +++G+ WL+TLG +++K +M +
Sbjct: 269 VLPVSXCQLVLGVQWLETLGPIEMDYKKLTMTY 301
>gi|116310275|emb|CAH67280.1| OSIGBa0111L12.7 [Oryza sativa Indica Group]
Length = 940
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 110/243 (45%), Gaps = 11/243 (4%)
Query: 17 FEKMLPGSVFLCTWGG---FNSDRIVQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEK 73
F+ +P + T GG ++DRI H R + +L+ A + GLC+ C EK
Sbjct: 187 FKGAMPLPLPPTTKGGPPIISNDRIGTELNNHS-REYDRLS-ALKSYRRSKGLCFVCGEK 244
Query: 74 FSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLT 133
+ H+C +Q+ ++QE ++ Q + S+P E + ++ +S ++
Sbjct: 245 WGRDHKC-ASSIQLHVVQEL---LDVLQGSSQSEQAVSEPPES--DTLMAISQQAINVTD 298
Query: 134 SPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQ 193
S +++L + ++++L DSG++H+F+ ++ L L P V + G
Sbjct: 299 SNHSIRLRGWVQGIEILMLIDSGSTHSFVYQQIGLKLSGVKAMPVPARVKVADGGFLTCS 358
Query: 194 GICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIG 253
+ QG+ +F L LG ++I+ + WL+ ++W ++F +++
Sbjct: 359 LHIIECDWLTQGIHFKSNFRLLPLGAYNVILEMDWLERFSPMRVDWVHKWLEFQLNDSMV 418
Query: 254 KNQ 256
+ Q
Sbjct: 419 RLQ 421
>gi|77551190|gb|ABA93987.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1485
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVE-DVGQERELESKPTEGAKNQVVE 123
GLCY C EK+SP H+C +Q+ +QE A Q + D G +++P + +
Sbjct: 403 GLCYLCAEKWSPSHKC-SGSVQLNAVQEVFALLQQNDSDSGNSSGEDAEP-----HSLFS 456
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL----VLKLPITNTEP 179
+S++++ G T+ +T+ L I +++L DSG+S +FIS+ V+ +++LP++
Sbjct: 457 LSVHAIQGTTTAQTMCLQGIIQGYDILILVDSGSSCSFISSSVMPQLSNLIQLPVS---- 512
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
+ V + G + V +QG L L D+I+G+ WL+ I+W
Sbjct: 513 FQVKVANGQMLSCETELANVSWSVQGHHFCSALKVLPLQSYDMILGMDWLERYSPMDIDW 572
Query: 240 KTHSMKFN 247
+ +++F
Sbjct: 573 QQKTIRFT 580
>gi|12324281|gb|AAG52110.1|AC023064_3 hypothetical protein; 60873-62443 [Arabidopsis thaliana]
Length = 508
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 19/197 (9%)
Query: 52 KLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELES 111
K+ E +S LCY DEK+ E +A ED G+ E+
Sbjct: 280 KVLSIEDRSKNNQKLCYFGDEKYK------------------ETRFEAEEDSGKMEEVHM 321
Query: 112 KPTEGAKNQVV-EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
+ E K +V +S+N++ G++ +T+++ + + +L D ++H+F+ ++V L
Sbjct: 322 EKVELEKTGIVAHISVNAISGVSDYRTMRVKGLYEKQVLSILIDPDSTHSFMDSKVAEKL 381
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLK 230
K + V + G L+G ++ D + + L D+++G WL+
Sbjct: 382 KCVLKPASMAQVSVADGRLLGLNAKIDKFQWELRGTQLQADLMVITLRGCDMVLGAQWLE 441
Query: 231 TLGATHINWKTHSMKFN 247
TLG ++K M+F+
Sbjct: 442 TLGPITCDFKKSVMQFH 458
>gi|77551679|gb|ABA94476.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 940
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 13/190 (6%)
Query: 65 GLCYKCDEKFSPGHRCRKQ-ELQVV-----LLQEY-EAEAQAVEDVGQERELESKPTEGA 117
GL + C E++S H+C +L VV LL+ + E + V D E+ES+ TE
Sbjct: 332 GLYHTCGERWSHEHKCGPTVQLHVVEELLDLLENFDENQTATVSD-----EIESEETE-V 385
Query: 118 KNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNT 177
+V ++S +++ + TL+L + + ++++L DSG++H+F+S + L
Sbjct: 386 NGEVCQISKEAMLETETSGTLRLQGLMQHHQIMLLVDSGSTHSFVSAALDDKLGGKQRAV 445
Query: 178 EPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHI 237
V + G ++QG + L LG D+I+G+ WL+ +
Sbjct: 446 PAIKVRIADGGILHCNKEIVDCLWLVQGESFLTSLKVLPLGNYDVILGMDWLEQHSPMKV 505
Query: 238 NWKTHSMKFN 247
+W+ +++F+
Sbjct: 506 DWRAKTLQFH 515
>gi|147840922|emb|CAN73185.1| hypothetical protein VITISV_028246 [Vitis vinifera]
Length = 674
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 102 DVGQERELESKPTEGAKNQV-VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHN 160
DV E+ L+ K T G +QV +EVS++++ SP+T+++A+ I ++ ++ L D+G +HN
Sbjct: 373 DVVDEK-LQMKDTLG--DQVKLEVSIHALTSWASPRTMRVAAAIGSQHMIALIDNGFTHN 429
Query: 161 FISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT 220
F+S +V L+L + T+ + + + + QG V + LQG+ L L
Sbjct: 430 FLSEKVARFLRLLMVPTKSFAIHVASSERLLCQGHFEKVQMNLQGITFSFTLYSLPLTRL 489
Query: 221 DIIMG 225
D+ G
Sbjct: 490 DMKNG 494
>gi|108708778|gb|ABF96573.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1481
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 65 GLCYKCDEKFSPGHRC------RKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAK 118
GLC+KC +K++P HRC + +L+ VL + A E E +
Sbjct: 781 GLCFKCGDKYTPEHRCAVGGQIKAMKLEEVLTDDILDAVIAAEQSDDEED---------- 830
Query: 119 NQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPI 174
+SLN+ G P + L + +++K +++L DSG+SH+FI +L LP+
Sbjct: 831 ---CHISLNAFTGAHLPTAIHLRALVHSKVLLLLVDSGSSHSFIDYNFAHMLGLPL 883
>gi|12322951|gb|AAG51467.1|AC069160_13 hypothetical protein, 5' partial [Arabidopsis thaliana]
Length = 368
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 19/197 (9%)
Query: 52 KLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELES 111
K+ E +S LCY DEK+ E +A ED G+ E+
Sbjct: 140 KVLSIEDRSKNNQKLCYFGDEKYK------------------ETRFEAEEDSGKMEEVHM 181
Query: 112 KPTEGAKNQVV-EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
+ E K +V +S+N++ G++ +T+++ + + +L D ++H+F+ ++V L
Sbjct: 182 EKVELEKTGIVAHISVNAISGVSDYRTMRVKGLYEKQVLSILIDPDSTHSFMDSKVAEKL 241
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLK 230
K + V + G L+G ++ D + + L D+++G WL+
Sbjct: 242 KCVLKPASMAQVSVADGRLLGLNAKIDKFQWELRGTQLQADLMVITLRGCDMVLGAQWLE 301
Query: 231 TLGATHINWKTHSMKFN 247
TLG ++K M+F+
Sbjct: 302 TLGPITCDFKKSVMQFH 318
>gi|14165316|gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japonica Group]
gi|31433481|gb|AAP54986.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1409
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 32 GFNSDRIVQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCR-KQELQVVLL 90
G N +R+ ++GR F + +++C + C E + PGH+C+ K+ L ++L
Sbjct: 406 GLNRNRLPNQNVINQGRNFANKVPPKTNGDKKC---WFCKEVWFPGHQCKVKKALNALML 462
Query: 91 QEYEAEAQAVEDVG-QEREL-----ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEI 144
++ E E + E+ + RE+ E+ P E +++ VS N++ G T P T + +I
Sbjct: 463 EDEELEEKGEEEKEVKTREMTQENGETSPDESGTEELMYVSQNAMQGTTRPDTFSMIIQI 522
Query: 145 NNKKVVVLTDSGASHNFISNEVVLVLKLPITNTE 178
+ K+ + L DSG++ F+ E L P +TE
Sbjct: 523 HGKRAIGLVDSGSTSTFMDEEFALRNNCPTISTE 556
>gi|147767990|emb|CAN67159.1| hypothetical protein VITISV_039497 [Vitis vinifera]
Length = 711
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 152 LTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVED 211
+ SG++HNFIS +V +L LP+ T+P+ V + G+ K QG V +ILQGV+
Sbjct: 209 MQKSGSTHNFISEKVADMLHLPVVPTKPFTVKVANGTPLKCQGRFEHVHVILQGVQ---- 264
Query: 212 FLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQ 256
WL+ LG NWK +M F N K Q
Sbjct: 265 ----------------WLEQLGIVVCNWKKLTMVFQWENQTHKLQ 293
>gi|77551099|gb|ABA93896.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 897
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE-SKPTEGAKNQVVE 123
GLC C E++S H+C VL + +E + D E E E +P + A +++ +
Sbjct: 24 GLCPACGERWSRDHKCGPTVQLHVLEELWEMLDDHIMDSNIEPEAELFEPVQSADSEICQ 83
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFIS 163
+S V+GL + TL+L + +V++L DSG++H+FIS
Sbjct: 84 ISREVVLGLETTGTLRLQGWLQQHEVLMLVDSGSTHSFIS 123
>gi|110289425|gb|AAP54660.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 768
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 65 GLCYKCDEKFSPGHRC------RKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAK 118
GLC+KC +K++P HRC + +L+ VL + A E E +
Sbjct: 327 GLCFKCGDKYTPEHRCAVGGQIKAMQLEEVLTDDILDAVIAAEQSDDEED---------- 376
Query: 119 NQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPI 174
+SLN++ G P + L + +++K +++L D G+SH+FI +L LP+
Sbjct: 377 ---CHISLNALTGAHLPTAILLRALVHSKVLLLLVDYGSSHSFIDYNFAQMLGLPL 429
>gi|38568032|emb|CAD40406.3| OSJNBa0065J03.2 [Oryza sativa Japonica Group]
Length = 1629
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 56 AELQSNQEC-GLCYKCDEKFSPGHRCRKQ-ELQVV--LLQEYEAEAQAVEDVGQERELES 111
A L+S + GLC+ C E++ H+C +L VV LL+ +E + + + + +ES
Sbjct: 421 ASLKSYRRAKGLCFVCGERWGRDHKCATSVQLHVVQELLEAMRSECNSDDILTAKDPIES 480
Query: 112 KPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV--VLV 169
E ++ +S ++ L + ++++L DSG++H+FI + LV
Sbjct: 481 --VEAIDGGLMAISQQAL----------LRGWVQGTEILMLIDSGSTHSFIDESIGSKLV 528
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+P++ + V + G K G QG DF L+LG D I+G+ WL
Sbjct: 529 GLIPLSRS--VTVKIADGGTMKCTQQILGCRWWTQGHYFKSDFKLLNLGSYDAILGMDWL 586
Query: 230 KTLGATHINW 239
+ ++W
Sbjct: 587 EQFSPMQVDW 596
>gi|77551695|gb|ABA94492.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 306
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 122 VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNT-EPY 180
V +S SVVG T++L I+ +VV L DSG++HNFI E+ L+L + +
Sbjct: 170 VSLSALSVVG--GDNTMRLPVMIDGLRVVSLIDSGSTHNFIHTELAHHLRLRLEPVRDGL 227
Query: 181 GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW--LKTLGATHIN 238
V++ G + G C + L++ G D LDL DII+G W L+TLG +
Sbjct: 228 RVVVANGDRIVSPGRCHNLPLLIDGEIFRVDCFALDLCAVDIILGTEWLQLQTLGPVLWD 287
Query: 239 WK 240
+K
Sbjct: 288 FK 289
>gi|224132328|ref|XP_002321312.1| predicted protein [Populus trichocarpa]
gi|222862085|gb|EEE99627.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 102 DVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNF 161
DV E +E K + K + +SLN++ + T+++ + +++V+L DSG++HNF
Sbjct: 245 DVEAENIIE-KLMKNKKIKEYSLSLNALADNYAHNTIRIRGNYHGRELVILIDSGSTHNF 303
Query: 162 ISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITD 221
I + L++ I + V + GS +Q E V D L LG D
Sbjct: 304 IDEHIAGELQISIERSLVLTVTIANGSTILCDSYTTEFKWFMQNYEFVVDLKILKLGRCD 363
Query: 222 IIMGIHWLKT 231
+++G+ WL +
Sbjct: 364 VVLGMDWLNS 373
>gi|147867132|emb|CAN82647.1| hypothetical protein VITISV_005196 [Vitis vinifera]
Length = 456
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 21/115 (18%)
Query: 102 DVG--QERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASH 159
D+G QE ELES E+ L+++ T P+T+ + + + +VVVL DSG++H
Sbjct: 171 DIGEVQEPELES-----------EIKLHALTRWTGPRTMCIIARMGPHEVVVLVDSGSTH 219
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQ--------GICRGVGLILQGV 206
NFIS+ + + +LPI + E + V++ G + Q +CR V L+ V
Sbjct: 220 NFISDRLENMPRLPIIHMEAFSVLVANGEKLRCQRLYDKVVERLCRRVPGALKSV 274
>gi|50582700|gb|AAT78770.1| putative retrotransposon gag protein [Oryza sativa Japonica Group]
gi|108709720|gb|ABF97515.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 748
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLCY C +K+S H+C +Q+ +QE A Q +D L+ + A+++++ V
Sbjct: 428 GLCYICAKKWSHNHKC-ANSVQLHAVQEVFAHLQDPQDSVSADILDVE--SPARSELMVV 484
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
SL ++ G+ S T+++ + +V++L DSG+S +FIS+++ L + P V +
Sbjct: 485 SLLALQGVESVGTMRILGYVQGFEVLILVDSGSSVSFISSKLATGLSGLHSLPTPLKVQV 544
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
+G I QG D L L D+I+GI WL T ++W
Sbjct: 545 ASGGVLHCDSIVTQCEWFTQGYTFRTDLRVLPLTSFDMILGIDWLATHSPMTVDW 599
>gi|52353559|gb|AAU44125.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1474
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ VV
Sbjct: 310 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VV 346
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 347 RGRVNHVTAEDVLTTPDVIVGTFPIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 406
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 407 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 456
>gi|255576772|ref|XP_002529273.1| conserved hypothetical protein [Ricinus communis]
gi|223531262|gb|EEF33105.1| conserved hypothetical protein [Ricinus communis]
Length = 278
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 18/156 (11%)
Query: 67 CYKCDEKFSPGHRCRKQELQVV----LLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
CY+C K+ P H+C+ + L + + +ED G V
Sbjct: 127 CYRCGNKYYPRHQCKNKALLYMGGEEEECAEDEYTSFIEDKGVGE--------------V 172
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
E+S+++ G S TLK+ S I K +++L DS ++H+F+ +V + I P +
Sbjct: 173 ELSMHATSGSASSNTLKIKSSIGGKTIMILVDSRSTHSFLDVKVAKDVGSHIVKAPPLNI 232
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLG 218
+ ++G C + +QG + L+LG
Sbjct: 233 TVANSLCMWSRGRCEKLTWDMQGHHFCFNIRVLELG 268
>gi|50897341|gb|AAT85792.1| reverse transcriptase (RNA-dependent DNA polymerase) family protein
[Oryza sativa Japonica Group]
gi|108709088|gb|ABF96883.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1708
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 622 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 658
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I + +L DSGASH+FIS V ++L +
Sbjct: 659 RGRVNHVTAEDVLTTPDVIVGTFLIYSIPATILFDSGASHSFISVPFVGRIQLGVERLRN 718
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 719 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 768
>gi|20143556|gb|AAM12313.1|AC091680_14 putative polyprotein [Oryza sativa Japonica Group]
Length = 1453
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 45/186 (24%)
Query: 57 ELQSNQECGLCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKP 113
E+Q Q LC+ C F PGH +C K Q + QA +P
Sbjct: 315 EVQGQQR--LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRP 350
Query: 114 TEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------N 164
G K+ V+ +N V LT+P + I++ +L DSGASH+FIS N
Sbjct: 351 NNGGKD-VIRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRN 409
Query: 165 EV-VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
++ V L+ P+ T P GV+ A+ V + +QG+ D + LD D+I
Sbjct: 410 QLGVERLRNPLLITTPRGVM-------TAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVI 462
Query: 224 MGIHWL 229
+G++WL
Sbjct: 463 LGMNWL 468
>gi|108862596|gb|ABA97714.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1287
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 33/198 (16%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHR--CRKQELQVVLLQEYEAEAQAVEDVGQERE 108
++L++A+ + GLCY DE+++ GH CR+ V + E +++
Sbjct: 245 KRLSQADQAERRRLGLCYNFDERYTRGHNRVCRR----VFFIDGVELADADDAQAAADQD 300
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
E+ V V+L P +L V DSG++HNFIS
Sbjct: 301 AEAP---------VAVAL-------GPASL-----------VAFLDSGSTHNFISEAAAR 333
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
+P+ ++ G G+ + L + G D + L D+++G W
Sbjct: 334 RSGMPLHTRPRLTAMVANGERVTCAGVLKAAPLTIDGALFPADLFVMPLVGFDVVLGTCW 393
Query: 229 LKTLGATHINWKTHSMKF 246
L TLG + +H M F
Sbjct: 394 LGTLGPIVWDLASHRMSF 411
>gi|110289465|gb|ABG66211.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1666
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 45/186 (24%)
Query: 57 ELQSNQECGLCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKP 113
E+Q Q LC+ C F PGH +C K Q + QA +P
Sbjct: 510 EVQGQQR--LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRP 545
Query: 114 TEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------N 164
G K+ V+ +N V LT+P + I++ +L DSGASH+FIS N
Sbjct: 546 NNGGKD-VIRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRN 604
Query: 165 EV-VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
++ V L+ P+ T P GV+ A+ V + +QG+ D + LD D+I
Sbjct: 605 QLGVERLRNPLLITTPRGVM-------TAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVI 657
Query: 224 MGIHWL 229
+G++WL
Sbjct: 658 LGMNWL 663
>gi|226407|prf||1510387A retrotransposon del1-46
Length = 1443
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 10/91 (10%)
Query: 151 VLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRT----GSATKAQGICRGVGLILQGV 206
VL D+G++H+FI+ ++ +L++P+ +P G IL G++T +C+G + +
Sbjct: 348 VLIDTGSTHSFITPRIIKMLEIPV---QPLGYILSVISPIGTSTFVNQVCKGCMITIGNQ 404
Query: 207 EIVEDFLPLDLGITDIIMGIHWLKTLGATHI 237
E+ D + LDL DI++G+ W L A H+
Sbjct: 405 ELTVDLIILDLEDPDILLGMDW---LAAYHV 432
>gi|32489198|emb|CAE04383.1| OSJNBa0027G07.25 [Oryza sativa Japonica Group]
gi|38347092|emb|CAE02564.2| OSJNBa0006M15.7 [Oryza sativa Japonica Group]
Length = 1807
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 662 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 698
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+ +N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 699 QGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 758
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 759 PLLITTPGEVMTAKYYSPAVPIEIQGIPFPSDLILLDTRNLDVILGMNWL 808
>gi|108711739|gb|ABF99534.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1761
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 43/177 (24%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 696 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 732
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VLVLKL 172
+N V LT+P + I++ +L DSGASH+FIS N++ V L+
Sbjct: 733 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 792
Query: 173 PITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
P+ T P GV+ A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 793 PLLITTPRGVM-------TAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 842
>gi|40786567|gb|AAR89842.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1789
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 43/177 (24%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 696 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 732
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VLVLKL 172
+N V LT+P + I++ +L DSGASH+FIS N++ V L+
Sbjct: 733 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 792
Query: 173 PITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
P+ T P GV+ A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 793 PLLITTPRGVM-------TAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 842
>gi|326497069|dbj|BAK02119.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 64/133 (48%)
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI 183
+S +++ G +P T++L +++ ++ ++ L DSG++H+F+S L +P+ V
Sbjct: 35 LSPHALSGEEAPSTIRLRAQVGDQVMLFLIDSGSTHSFVSKAFATRLSVPMVTLPAVSVH 94
Query: 184 LRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHS 243
+ + + + + + G D L+LG D ++G+ WL + +W +
Sbjct: 95 MANSQRLRCDSMVQQLTWQVPGHTFHTDLRVLELGAYDGVLGMDWLSRHSPMNCHWLEKT 154
Query: 244 MKFNTRNTIGKNQ 256
+ F T + + Q
Sbjct: 155 ISFQTEGKVVQLQ 167
>gi|147816473|emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
Length = 1259
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 59/101 (58%), Gaps = 14/101 (13%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++L+ E++ + GLC+ CDE+++PGH+CR+ +L LL E E+ ++ E +E +E
Sbjct: 268 KRLSWEEIRKKRSLGLCFSCDERYTPGHKCRQPQL---LLMEGESGWESSE--MEEPLVE 322
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVV 151
+P E+SL ++ G + +T+++ +I ++V
Sbjct: 323 QEP---------EISLYALAGWSESRTMRIYXQIGQHQLVA 354
>gi|108862189|gb|ABA96448.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|215767578|dbj|BAG99806.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 649
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%)
Query: 148 KVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVE 207
++++L DSG++H+FI EV L L +P V + G +QG +
Sbjct: 2 ELLMLVDSGSTHSFIDKEVGLKLSGIQKLKQPLIVRIADGGTMSCTHEITNCKWWMQGYQ 61
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+F L LG DII+G+ WL+++ ++W M+FN
Sbjct: 62 FCNNFRMLPLGNYDIILGMDWLESISPMQVDWANKWMEFN 101
>gi|55168124|gb|AAV43991.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1499
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 356 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 392
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 393 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 452
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 453 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 502
>gi|108708196|gb|ABF95991.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1748
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 584 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 620
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 621 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 680
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 681 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 730
>gi|110289660|gb|AAP55181.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1459
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 41/188 (21%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLC+ C EK+ Q +++VG ++ +
Sbjct: 579 GLCFTCGEKWE----------------------QEIDEVGD---------------LMSI 601
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV--VLVLKLPITNTEPYGV 182
S +V G S ++++L + ++++L DSG++H+F+ V +V P+ +P V
Sbjct: 602 SQQAVWGTESSRSIRLIGWVQGTELLMLIDSGSTHSFMDETVGSKMVGVSPLR--KPLSV 659
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTH 242
L G + +QG +F L+LG DII+G+ WL+ ++W
Sbjct: 660 QLADGGSLLCSHEIANCKWWMQGHSFSSNFRLLNLGGYDIILGMDWLEQFSPMQVDWSQK 719
Query: 243 SMKFNTRN 250
M+ N
Sbjct: 720 WMEIQVNN 727
>gi|32492194|emb|CAE03534.1| OSJNBa0061C06.22 [Oryza sativa Japonica Group]
gi|39545591|emb|CAE02835.3| OSJNBa0014F04.1 [Oryza sativa Japonica Group]
Length = 1450
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 280 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 316
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 317 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 376
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 377 PLLITTLGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 426
>gi|116310099|emb|CAH67119.1| H0502G05.10 [Oryza sativa Indica Group]
Length = 1826
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 662 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGVKD-VI 698
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 699 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 758
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 759 PLLITTPGGVMTAKYYIPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 808
>gi|58532097|emb|CAD40058.3| OSJNBa0085C10.10 [Oryza sativa Japonica Group]
Length = 1785
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 621 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 657
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V+ LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 658 RGRVNHVMAEDVLTTPDIIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 717
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 718 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 767
>gi|21740445|emb|CAD41630.1| OSJNBa0091D06.6 [Oryza sativa Japonica Group]
Length = 1799
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 635 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGVKD-VI 671
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 672 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 731
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 732 PLLITTPGGVMTAKYYIPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 781
>gi|14626274|gb|AAK71542.1|AC087852_2 putative reverse transcriptase [Oryza sativa Japonica Group]
gi|108711059|gb|ABF98854.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 258
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 54/123 (43%)
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
SL+++ G+ T+++ + + L DSG++H+FI+ E LP+ +
Sbjct: 22 SLHAIAGVPVADTMQVQVTVGATTLTALLDSGSTHSFIAEEAACRTGLPVQPRPRMTATV 81
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
G G+ R L + G D + L D+++G W+ +LG ++ +M
Sbjct: 82 ANGEKVACPGVIRQAVLSIDGSLFTVDLFVIPLAGYDMVLGTQWMASLGPIVWDFTERTM 141
Query: 245 KFN 247
F
Sbjct: 142 SFQ 144
>gi|4539660|gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
Length = 1484
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 34/179 (18%)
Query: 62 QECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQV 121
+E + Y C EKF+P + R+ S P N V
Sbjct: 342 KEGHMSYDCPEKFNPQYNDRR----------------------------STPNSAKVNNV 373
Query: 122 VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYG 181
++ P+ + IN+ VL DSGASH FIS V V LP+
Sbjct: 374 AAETVQE-----GPEIMMGTFSINSIPATVLFDSGASHTFISQAFVRVHSLPLVAMNTPM 428
Query: 182 VILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
++ G C L L+GV+ + + D+I+G+ W+K AT+IN K
Sbjct: 429 LVNSPGGTIPVSLRCPSASLSLRGVDFPISPMVMRTSGIDVILGLDWMKQ-HATNINCK 486
>gi|62734325|gb|AAX96434.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550057|gb|ABA92854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1409
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 43/177 (24%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 344 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 380
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VLVLKL 172
+N V LT+P + I++ +L DSGASH+FIS N++ V L+
Sbjct: 381 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFMGRNQLGVERLRN 440
Query: 173 PITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
P+ T P GV+ A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 441 PLLITTPGGVM-------TAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 490
>gi|21743213|emb|CAD40068.1| OSJNBa0085C10.21 [Oryza sativa Japonica Group]
Length = 1825
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 661 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 697
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 698 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 757
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 758 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 807
>gi|50300503|gb|AAT73646.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1764
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 600 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 636
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 637 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 696
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 697 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 746
>gi|50300553|gb|AAT73694.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1778
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 623 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 659
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 660 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 719
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 720 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 769
>gi|255563126|ref|XP_002522567.1| conserved hypothetical protein [Ricinus communis]
gi|223538258|gb|EEF39867.1| conserved hypothetical protein [Ricinus communis]
Length = 174
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRK 82
FR++T E++ QE GLCY CDEKF+PGHRC++
Sbjct: 141 FRRITNQEVRERQEKGLCYYCDEKFTPGHRCQR 173
>gi|242797624|ref|XP_002482998.1| hypothetical protein TSTA_008890 [Talaromyces stipitatus ATCC
10500]
gi|218716343|gb|EED15764.1| hypothetical protein TSTA_008890 [Talaromyces stipitatus ATCC
10500]
Length = 207
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKA 192
T KT+ + ++I K + +L DSGA+ N+IS + + + K+PI T+ + I+ T
Sbjct: 43 TDYKTITILTKIQGKDIRILLDSGATGNYISQKFIHLNKIPIKTTDEWTKIVGIDRETIT 102
Query: 193 QGICRGVGLILQ-----GVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+G + IL I D P+D D ++G+ WLK I+W + ++ N
Sbjct: 103 KGYKKKTSGILMRSGKYATTITFDIAPMDTQYYDAVLGMAWLKEQNLI-IDWASGTVAVN 161
Query: 248 T 248
+
Sbjct: 162 S 162
>gi|108862403|gb|ABA97246.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1225
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 43/177 (24%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 102 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 138
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VLVLKL 172
+N V LT+P + I++ +L DSGASH+FIS N++ V L+
Sbjct: 139 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILLDSGASHSFISVPFMGRNQLGVERLRN 198
Query: 173 PITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
P+ T P GV+ A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 199 PLLITTPGGVM-------TAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 248
>gi|18767374|gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa
Japonica Group]
gi|31431495|gb|AAP53268.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1230
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 151 VLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVE 210
VL DSGA+H+FIS V +P + + I + IC+ + + G E+
Sbjct: 412 VLFDSGATHSFISTNFVRKYTIPTSQLKERICIETPLDSQTTNLICKLCPITIDGWELTA 471
Query: 211 DFLPLDLGITDIIMGIHWL 229
D +PLD+ DII+G+ WL
Sbjct: 472 DLIPLDMHDFDIILGMDWL 490
>gi|62733376|gb|AAX95493.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|62734610|gb|AAX96719.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550245|gb|ABA93042.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1497
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 43/177 (24%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 551 LCFNC---FEPGHFVDKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 587
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VLVLKL 172
+N V LT+P + I++ +L DSGASH+FIS N++ V L+
Sbjct: 588 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFMGRNQLGVERLRN 647
Query: 173 PITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
P+ T P GV+ A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 648 PLLITTPGGVM-------TAKYYSPAVPIEIQGIPFPLDLILLDTNNLDVILGMNWL 697
>gi|19881766|gb|AAM01167.1|AC113336_19 Putative retroelement [Oryza sativa Japonica Group]
gi|110288687|gb|ABB46920.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 892
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LCY C F PGH +C K Q + QA + G K+ V+
Sbjct: 647 LCYNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 683
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 684 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 743
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 744 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 793
>gi|62733127|gb|AAX95244.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|62734031|gb|AAX96140.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550685|gb|ABA93482.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1567
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 700 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 736
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V+ LT+P + I++ +L DSGASH+F+S V +L +
Sbjct: 737 RGRVNHVMAEDVLTTPDVIFGTFPIHSIPATILFDSGASHSFMSVPFVGRNQLGVERLRN 796
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ + D + LD D+I+G++WL
Sbjct: 797 PLLITTPGGVMTAKYYSHAVPIEIQGIPFLSDLILLDTKNLDVILGMNWL 846
>gi|116308903|emb|CAH66035.1| H0515C11.11 [Oryza sativa Indica Group]
Length = 499
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 81/211 (38%), Gaps = 55/211 (26%)
Query: 35 SDRIVQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYE 94
+D +V P R FR+L+ AEL + GLCY CDEKF H+C + + EY+
Sbjct: 301 TDAMVDATP----RQFRRLSPAELAERRRQGLCYNCDEKFVRDHKCAR-----LFHIEYD 351
Query: 95 AEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLA-SEINNKKVVVLT 153
A + +P VSLN++ G+ T++L + I+
Sbjct: 352 ETASDDDAAPAGDADTDEP---------RVSLNALSGVDGANTMRLPCARIS-------- 394
Query: 154 DSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFL 213
+ P ++ R A IC L + G D
Sbjct: 395 ---------------------ASWWPTAIVWR---AQAFAAIC----LTIDGERFHVDCF 426
Query: 214 PLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
L++ DII+G WL++LG N++ M
Sbjct: 427 VLEVYAIDIILGTEWLRSLGPILWNFRNMRM 457
>gi|57863932|gb|AAS90688.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1789
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V
Sbjct: 625 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VS 661
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 662 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 721
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 722 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 771
>gi|34015085|gb|AAQ56283.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1234
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 123 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 159
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 160 RGRVNHVTAEDVLTTPDVIVGTFFIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 219
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 220 PLLITTPGGVMTAKYYSPVVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 269
>gi|242117516|dbj|BAH79999.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1374
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 342 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 378
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 379 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 438
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + +D D+I+G++WL
Sbjct: 439 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILVDTKNLDVILGMNWL 488
>gi|54287545|gb|AAV31289.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1721
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 37/195 (18%)
Query: 48 RGFRKLTEAELQSNQECG-------LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEA 97
R R T A +QS Q C LC+ C F PGH +C K Q +
Sbjct: 567 RAPRPPTPA-VQSGQGCRDAQGQQRLCFNC---FEPGHFADKCPKPRRQ---------QG 613
Query: 98 QAVEDVGQERELESKPTEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTD 154
QA + G K+ V++ +N V LT+P + I++ +L D
Sbjct: 614 QA----------PPRSNNGGKD-VIQGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFD 662
Query: 155 SGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLP 214
SGASH+FIS V +L + +I G A+ V + +QG+ D +
Sbjct: 663 SGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLIL 722
Query: 215 LDLGITDIIMGIHWL 229
LD D+I+G++WL
Sbjct: 723 LDTKNLDVILGMNWL 737
>gi|77555576|gb|ABA98372.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1800
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA P G K+ V+
Sbjct: 636 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPHPNNGGKD-VI 672
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 673 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 732
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 733 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 782
>gi|77556441|gb|ABA99237.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1790
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G ++ V+
Sbjct: 626 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGQD-VI 662
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 663 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 722
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 723 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 772
>gi|62733129|gb|AAX95246.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550683|gb|ABA93480.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1311
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ VL DSGASH+F+S + P + +I GS + Q C V + +
Sbjct: 273 VNSVPATVLLDSGASHSFVSRSCASQHQFPTIPLKCSLLIQTPGSEMRTQTGCPRVKIEI 332
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWLKTLGA 234
+GVE + + LD D+I+G+ WL + A
Sbjct: 333 EGVEFFANLIMLDTPQLDVILGMDWLHSSKA 363
>gi|38344636|emb|CAE05069.2| OSJNBa0094P09.8 [Oryza sativa Japonica Group]
Length = 954
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 624 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 660
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 661 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 720
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + L+ D+I+G++WL
Sbjct: 721 PLLITTPGGVMTAEYYSPAVPIEIQGIPFPSDLILLNTKNLDVILGMNWL 770
>gi|293331925|ref|NP_001168083.1| uncharacterized protein LOC100381817 [Zea mays]
gi|223945897|gb|ACN27032.1| unknown [Zea mays]
Length = 117
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%)
Query: 124 VSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI 183
VS+ +V + P+T L I+++ V ++ DS +SH+F+ ++ L+ + + P V
Sbjct: 3 VSVAAVSRMPGPRTFCLGGIIHHQAVRIMVDSDSSHSFLKTKLATQLQGIVPLSVPIVVQ 62
Query: 184 LRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHIN 238
+ G+ + C +Q DF LD+ D I+GI WL HI+
Sbjct: 63 VANGARLQCSAHCPATAWSVQEFTFSTDFKILDVFSYDAILGIDWLSQFSPMHIH 117
>gi|449443680|ref|XP_004139605.1| PREDICTED: sodium/hydrogen exchanger 6-like [Cucumis sativus]
Length = 880
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 33/40 (82%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLL 90
++L++AE +S + GLC+KC+EK++PGHRCR +E + ++L
Sbjct: 805 KRLSDAEYRSRLDKGLCFKCNEKYTPGHRCRVKEKRELML 844
>gi|284434534|gb|ADB85289.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 397
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 80 CRKQELQVVLL----QEYEAEAQAVEDVG-----QERELESKPTEGAKNQVVEVSLNSVV 130
C+ E Q+ + Q+ E E + + G Q + S P K V+++S+++V
Sbjct: 116 CKMNEKQLFTVAQDDQDSENEEEGRDASGELEDTQYKTPPSSPEHQKKETVLQISMHAVQ 175
Query: 131 GLTS-PKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSA 189
G +S T L +I KV L DSG+S F++ ++V + I N V++
Sbjct: 176 GTSSVSNTFTLTLKIGGVKVTALVDSGSSATFVNPKLVTKIPCEIVNHTAIRVMIADRRL 235
Query: 190 TKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKT 241
+ +C+G +QG + D L L +I G W+ T +N +
Sbjct: 236 MGSDTLCQGCKYEIQGEKFSSDMRVLPLRGYHVIFGADWICTHNPIGLNLRA 287
>gi|38567989|emb|CAE04032.2| OSJNBb0068N06.8 [Oryza sativa Japonica Group]
Length = 947
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 44/181 (24%)
Query: 62 QECGLCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAK 118
Q+C LC+ C F PGH +C K Q + QA +P G K
Sbjct: 189 QQC-LCFNC---FKPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGK 225
Query: 119 NQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VL 168
+ V +N V L +P + I++ +L DSGASH+FIS N++ V
Sbjct: 226 D-VTRGRVNHVTAEDVLRTPDIIVGTFLIHSIPATILFDSGASHSFISVPFMGRNQLGVE 284
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
L+ P+ T P GV+ A+ V + +QG+ D + LD D+I+G++W
Sbjct: 285 RLRNPLLITTPGGVM-------TAKYYSPAVPIEIQGIAFPSDLILLDTKNLDVILGMNW 337
Query: 229 L 229
L
Sbjct: 338 L 338
>gi|77553962|gb|ABA96758.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1786
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + + G K+ V+
Sbjct: 622 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSSNGGKD-VI 658
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 659 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 718
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 719 PLLITTPGGVMTAKYYSSAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 768
>gi|108708192|gb|ABF95987.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1273
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + ++ + G K+ V+
Sbjct: 622 LCFNC---FEPGHFADKCPKPRRQ-------------------QSQVPPRSNNGGKD-VI 658
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 659 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 718
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 719 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 768
>gi|108708199|gb|ABF95994.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1534
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 370 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 406
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 407 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 466
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G AQ V + +QG+ D + LD D+I+G++WL
Sbjct: 467 PLLITTPGGVMTAQYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 516
>gi|77551535|gb|ABA94332.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1668
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G+K+ V+
Sbjct: 605 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGSKD-VI 641
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 642 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 701
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 702 PMLITTPGGVMTAKFYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 751
>gi|62734487|gb|AAX96596.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|108864323|gb|ABA93205.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1255
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 69/170 (40%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q+ + P G K+ V
Sbjct: 121 LCFNC---FEPGHFADKCSKPR-------------------RQQDQTPPHPNNGGKD-VT 157
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DS ASH+FIS V +L +
Sbjct: 158 RGRVNHVTAEDVLTTPDIIVGTFLIHSIPATILFDSKASHSFISVPFVGRNQLGVERLRN 217
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D +PLD D+I+ ++WL
Sbjct: 218 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLIPLDTKYLDVILEMNWL 267
>gi|147767540|emb|CAN66709.1| hypothetical protein VITISV_006396 [Vitis vinifera]
Length = 1133
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
E+SL++ GL +P T + + + VL DSG++HNFIS V + + V
Sbjct: 1033 EISLHATAGLKAPNTTTMTGSFLFQPMEVLIDSGSTHNFISVLVAECVGFNLKQDRKMEV 1092
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
++ +G + G C V L LQ V IV FL L L D++
Sbjct: 1093 MVASGEKLVSLGSCSNVQLKLQKVTIVVKFLVLPLEDFDVV 1133
>gi|356522690|ref|XP_003529979.1| PREDICTED: alpha-1,4-galacturonosyltransferase 1-like [Glycine
max]
Length = 734
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 14 VSGFEKMLPGSVFLCTWG------GFNSDRIVQVYPAHEGRGFRKLTEAELQSNQECGLC 67
+ GF++ +P WG G N D ++ + F++L+ E+Q + GLC
Sbjct: 15 IGGFQRWMPEE---WDWGTVKGNVGSNRDGNIKDQAKQQNTCFKQLSLEEIQKKRMKGLC 71
Query: 68 YKCDEKFSPGHRCRKQELQVVLLQEYE 94
+ DEK SP H C+ + L++++L+E E
Sbjct: 72 FAYDEKLSPNHVCKNKNLKILMLEEVE 98
>gi|77555003|gb|ABA97799.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1757
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 658 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 694
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 695 RGRVNHVTAEGVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 754
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 755 PLLITTPGGVMTAKYYSPAVPMDIQGIPFPSDLILLDTKNLDVILGMNWL 804
>gi|20451036|gb|AAM22007.1|AC093178_2 Putative polyprotein [Oryza sativa Japonica Group]
gi|31430824|gb|AAP52683.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1229
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + GAK+ V+
Sbjct: 658 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGAKD-VI 694
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+F+S V +L +
Sbjct: 695 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFVSVPFVGRNQLGVERLRN 754
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 755 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 804
>gi|62734534|gb|AAX96643.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1643
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 69/170 (40%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q+ + P G K+ V
Sbjct: 539 LCFNC---FEPGHFADKCSKPR-------------------RQQDQTPPHPNNGGKD-VT 575
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DS ASH+FIS V +L +
Sbjct: 576 RGRVNHVTAEDVLTTPDIIVGTFLIHSIPATILFDSKASHSFISVPFVGRNQLGVERLRN 635
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D +PLD D+I+ ++WL
Sbjct: 636 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLIPLDTKYLDVILEMNWL 685
>gi|108708202|gb|ABF95997.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1764
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 600 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 636
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 637 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGKSQLGVERLRN 696
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 697 PLLITTPGGVMTAKYYSPAVPIEIQGIPFSSDLILLDTKNLDVILGMNWL 746
>gi|78708468|gb|ABB47443.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1494
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 340 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 376
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 377 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 436
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + L D+I+G++WL
Sbjct: 437 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLGTKNLDVILGMNWL 486
>gi|22539074|gb|AAN01246.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431332|gb|AAP53127.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1045
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 23/167 (13%)
Query: 66 LCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVS 125
LC+ C E +C K Q + QA +P G K+ V+
Sbjct: 630 LCFNCFEPRHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VIRGR 669
Query: 126 LNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
+N V LT+P + +++ +L DSGASH+FIS V +L + +
Sbjct: 670 VNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLL 729
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 730 ITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 776
>gi|14018097|gb|AAK52160.1|AC084831_14 putative polyprotein [Oryza sativa Japonica Group]
gi|108709292|gb|ABF97087.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1475
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 105 QERELESKPTEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNF 161
Q+ + +P G K+ V+ +N V LT+P + I++ +L DSGASH+F
Sbjct: 361 QQGQAPPRPNNGGKD-VIRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSF 419
Query: 162 ISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITD 221
IS V +L + +I G A+ V + +QG+ D + LD D
Sbjct: 420 ISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLD 479
Query: 222 IIMGIHWL 229
+I+G++WL
Sbjct: 480 VILGMNWL 487
>gi|77555928|gb|ABA98724.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1269
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 65 GLCYKCDEKFSPGHRCRKQ-ELQVVLLQEY-----EAEAQAVEDVGQERELESKPTEGAK 118
GLC+ C EK+S H+C +L VV + EA++ G + EL K +E
Sbjct: 340 GLCHTCGEKWSREHKCGPTVQLHVVEELLDLLEEPDGEAKSA---GTD-ELTEKASETV- 394
Query: 119 NQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTE 178
++V ++S +++G S TL+L I ++++L DSG++H+FIS E+ ++ +
Sbjct: 395 SEVCQISKEAMLGTESSGTLRLQGLIQQYEIMMLVDSGSTHSFISEEMASKIRGNQKTVQ 454
Query: 179 PYGVILRTGSATKAQG--ICRGVGLILQ 204
+ V + G ++Q I R V +LQ
Sbjct: 455 AFRVRVADGGILQSQKDEIERQVADMLQ 482
>gi|20177631|gb|AAM14686.1|AC097446_15 Putative polyprotein [Oryza sativa Japonica Group]
gi|31430230|gb|AAP52176.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1859
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 754 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 790
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 791 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 850
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 851 PLLITTPGGVMTAKYFSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 900
>gi|110288855|gb|ABB47096.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 987
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 606 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 642
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 643 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 702
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 703 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 752
>gi|38347308|emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 1329 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 1365
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 1366 RGRVNHVTAEDVLTTPDVIIGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 1425
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 1426 PLLITTPGGVMTAKNYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 1475
>gi|13992687|gb|AAK51581.1|AC022352_17 Putative retroelement [Oryza sativa Japonica Group]
Length = 959
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 588 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 624
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 625 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 684
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 685 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 734
>gi|77557165|gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1619
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 31/201 (15%)
Query: 65 GLCYKCDEKFSPGHRCRK-------QELQVVLLQEYEAEAQAVEDVGQERELESKPTEGA 117
GLCY C EK+SP H+C QEL + L+E ++ ++ E+ GQ L
Sbjct: 400 GLCYVCAEKWSPNHKCASSVQLNVVQELLCLFLEE-DSHVES-ENAGQNGSL-------- 449
Query: 118 KNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNT 177
+++ +SL +V G T+++ ++ K+++VL DSG+S +FIS+++ L T
Sbjct: 450 TRELMAISLQAVQGTEPDGTMRMLGQLQGKELLVLVDSGSSVSFISSQIAEGL----TGI 505
Query: 178 EPYGVILRTGSATKAQGICRGVGLIL-------QGVEIVEDFLPLDLGITDIIMGIHWLK 230
+P + R S A G G I+ QG + L + D+I+G+ WL
Sbjct: 506 QP---LSRRLSVRVANGETLCCGAIIPNCEWQVQGHKFQTTLRVLPITSYDMILGMDWLM 562
Query: 231 TLGATHINWKTHSMKFNTRNT 251
++W ++ + + T
Sbjct: 563 KHSPMSVDWSLKTITLSLQGT 583
>gi|55168118|gb|AAV43985.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55168194|gb|AAV44060.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1772
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 615 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 651
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LTSP + +++ +L DSGASH+FIS V +L +
Sbjct: 652 RGRVNHVTAEDMLTSPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 711
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 712 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 761
>gi|38347461|emb|CAD40088.2| OSJNBb0012A12.14 [Oryza sativa Japonica Group]
Length = 1075
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 374 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 410
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 411 RGRVNHVTAEDMLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 470
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 471 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 520
>gi|51091547|dbj|BAD36284.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1620
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 463 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 499
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 500 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 559
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 560 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 609
>gi|77554995|gb|ABA97791.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1791
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 668 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 704
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 705 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISMPFVGRNQLGVERLRN 764
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 765 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 814
>gi|242117532|dbj|BAH80015.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1480
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K + Q + QA + G K+ V+
Sbjct: 316 LCFNC---FEPGHFADKCPKPKRQ---------QGQA----------PPRSNNGGKD-VI 352
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 353 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 412
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 413 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 462
>gi|38346850|emb|CAD39932.2| OSJNBa0091C12.10 [Oryza sativa Japonica Group]
Length = 1461
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 297 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNHGGKD-VI 333
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 334 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 393
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 394 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 443
>gi|13129460|gb|AAK13118.1|AC080019_10 Polyprotein [Oryza sativa Japonica Group]
Length = 1781
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 627 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 663
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 664 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 723
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + L D+I+G++WL
Sbjct: 724 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLGTKNLDVILGMNWL 773
>gi|77555063|gb|ABA97859.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1806
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 36/192 (18%)
Query: 44 AHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAV 100
A G+G R ++Q Q LC+ C F PGH +C K Q + QA
Sbjct: 642 AQSGQGRR-----DVQGPQR--LCFNC---FEPGHFADKCPKPRRQ---------QGQA- 681
Query: 101 EDVGQERELESKPTEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGA 157
+ G K+ V+ +N V LT+P + I++ +L DSGA
Sbjct: 682 ---------PPRSNNGGKD-VIRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGA 731
Query: 158 SHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDL 217
SH+FIS V +L + +I G A+ V + +QG+ D + LD
Sbjct: 732 SHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDT 791
Query: 218 GITDIIMGIHWL 229
D+I+G++WL
Sbjct: 792 KNLDVILGMNWL 803
>gi|19881755|gb|AAM01156.1|AC113336_8 Putative retroelement [Oryza sativa Japonica Group]
gi|31430462|gb|AAP52371.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 620 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 656
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 657 RGRVNHVAAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 716
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 717 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 766
>gi|18425251|gb|AAL69429.1|AC098565_11 Putative polyprotein [Oryza sativa]
gi|31430202|gb|AAP52148.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1788
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 658 LCFNC---FEPGHFVDKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 694
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 695 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 754
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 755 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 804
>gi|38344459|emb|CAE04930.2| OSJNBa0017P10.7 [Oryza sativa Japonica Group]
gi|38345444|emb|CAE03296.2| OSJNBb0046P18.12 [Oryza sativa Japonica Group]
Length = 1469
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 305 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 341
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 342 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 401
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 402 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 451
>gi|54291803|gb|AAV32172.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1820
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 656 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 692
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 693 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 752
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ + D + LD D+I+G++WL
Sbjct: 753 PLLITTPGGVMTAKYYSPAVPIDIQGIPLPSDLILLDTKNLDVILGMNWL 802
>gi|77555354|gb|ABA98150.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1480
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V + N ++ G +A IC V L +
Sbjct: 477 VNSVPAIVLFDSGASHSFISQAFVKINGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 536
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 537 EEVDFLAKPIVLDSQSLDIILGMDWL 562
>gi|32489197|emb|CAE04382.1| OSJNBa0027G07.24 [Oryza sativa Japonica Group]
gi|38347091|emb|CAE02563.2| OSJNBa0006M15.6 [Oryza sativa Japonica Group]
Length = 1635
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 36/192 (18%)
Query: 44 AHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAV 100
A G+G R ++Q Q LC+ C F PGH +C K Q + QA
Sbjct: 588 AQSGQGRR-----DVQGPQR--LCFNC---FEPGHFADKCPKPRRQ---------QGQA- 627
Query: 101 EDVGQERELESKPTEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGA 157
+ G K+ V+ +N V LT+P + I++ +L DSGA
Sbjct: 628 ---------PPRSNNGGKD-VIRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGA 677
Query: 158 SHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDL 217
SH+FIS V +L + +I G A+ V + +QG+ D + LD
Sbjct: 678 SHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDT 737
Query: 218 GITDIIMGIHWL 229
D+I+G++WL
Sbjct: 738 KNLDVILGMNWL 749
>gi|110288682|gb|AAP52358.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1707
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 620 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 656
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 657 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 716
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 717 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 766
>gi|20043037|gb|AAM08845.1|AC113337_9 Putative retroelement [Oryza sativa Japonica Group]
Length = 1728
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 641 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 677
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 678 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 737
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 738 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 787
>gi|110288765|gb|ABG65969.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1502
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 43/177 (24%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 338 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 374
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VLVLKL 172
+N V LT+P + +++ +L DSGASH+FIS N++ V L+
Sbjct: 375 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 434
Query: 173 PITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
P+ T P GV+ A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 435 PLLTTTPGGVM-------TAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 484
>gi|38347567|emb|CAE05000.2| OSJNBb0093G06.8 [Oryza sativa Japonica Group]
Length = 1770
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 606 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 642
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 643 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 702
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 703 PLLITTPGGVMTAKYYSPAVPIEIQGIPFSSDLILLDTKNLDVILGMNWL 752
>gi|77554650|gb|ABA97446.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1847
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 683 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 719
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 720 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 779
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 780 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 829
>gi|22857586|gb|AAN09860.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1820
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 43/177 (24%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 656 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 692
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VLVLKL 172
+N V LT+P + +++ +L DSGASH+FIS N++ V L+
Sbjct: 693 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 752
Query: 173 PITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
P+ T P GV+ A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 753 PLLTTTPGGVM-------TAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 802
>gi|116317844|emb|CAH65877.1| OSIGBa0160I04.3 [Oryza sativa Indica Group]
Length = 1786
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 622 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 658
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 659 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 718
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 719 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 768
>gi|108862573|gb|ABA97909.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1613
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 105 QERELESKPTEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNF 161
Q+ + +P G K+ V+ +N V LT+P + I++ +L DSGASH+F
Sbjct: 490 QQGQAPPRPNNGGKD-VIRGRVNHVTAENMLTTPDVIVGTFLIHSIPATILFDSGASHSF 548
Query: 162 ISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITD 221
I V +L + +I G A+ V + +QG+ D + LD D
Sbjct: 549 IYVPFVGRNRLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLD 608
Query: 222 IIMGIHWL 229
+I+GI+WL
Sbjct: 609 VILGINWL 616
>gi|19881536|gb|AAM00937.1|AC021892_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1052
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 639 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 675
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 676 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVSFVGRNQLGVERLRN 735
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 736 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 785
>gi|58532064|emb|CAD40396.3| OSJNBa0004L19.15 [Oryza sativa Japonica Group]
Length = 1821
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 657 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 693
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 694 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 753
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 754 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 803
>gi|90265089|emb|CAH67761.1| H0124E07.8 [Oryza sativa Indica Group]
Length = 1427
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K + Q + QA + G K+ V+
Sbjct: 400 LCFNC---FEPGHFADKCPKPKRQ---------QGQA----------PPRSNNGGKD-VI 436
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 437 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 496
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 497 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 546
>gi|38347260|emb|CAE05307.2| OSJNBa0056L23.5 [Oryza sativa Japonica Group]
Length = 927
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 621 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 657
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 658 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGSNQLGVERLRN 717
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 718 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 767
>gi|32487701|emb|CAE05378.1| OSJNBa0022F16.2 [Oryza sativa Japonica Group]
gi|38346701|emb|CAE02186.2| OSJNBa0080E14.17 [Oryza sativa Japonica Group]
Length = 1494
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 618 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 654
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 655 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 714
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 715 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 764
>gi|50897320|gb|AAT85771.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108709111|gb|ABF96906.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1169
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 19 LCFNC---FKPGHFADKCPKPRRQ---------QGQA----------HPRSNNGGKD-VI 55
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 56 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 115
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 116 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 165
>gi|116311093|emb|CAH68022.1| H0807C06-H0308C08.9 [Oryza sativa Indica Group]
Length = 1804
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 668 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 704
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 705 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 764
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 765 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 814
>gi|78708033|gb|ABB47008.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1804
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 640 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 676
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 677 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKSQLGVERLRN 736
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 737 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 786
>gi|38344419|emb|CAE02385.2| OSJNBb0080H08.11 [Oryza sativa Japonica Group]
Length = 1809
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 658 LCFNC---FEPGHFADKCPKLRRQ---------QGQA----------PPRSNNGGKD-VI 694
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 695 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 754
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 755 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKSLDVILGMNWL 804
>gi|77554116|gb|ABA96912.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 382
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 67/121 (55%), Gaps = 11/121 (9%)
Query: 65 GLCYKCDEKFSPGHRCRKQ-ELQVVLLQEY--EAEAQAVEDVGQERELESKPTEGAKNQV 121
GLC+ E++S H+C + +L VV L+ + E E ++E + LES P E N +
Sbjct: 246 GLCFTHGERWSKDHKCAQTVQLHVVELEAFQLEEETDSLETI-----LESNPEE---NNL 297
Query: 122 VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYG 181
+ +S+++ G S +L++ I ++++L +SG++H+F+ +++ ++ T P
Sbjct: 298 MTISVHAWNGTDSAHSLRVKGLIQGTELLMLINSGSTHSFVDEQMIHHFPGVVSTTPPVK 357
Query: 182 V 182
V
Sbjct: 358 V 358
>gi|22725933|gb|AAN04943.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431094|gb|AAP52925.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1803
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 639 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 675
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 676 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVSFVGRNQLGVERLRN 735
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 736 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 785
>gi|32489461|emb|CAE05815.1| OSJNBa0028M15.7 [Oryza sativa Japonica Group]
Length = 1822
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 43/177 (24%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 658 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 694
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VLVLKL 172
+N V LT+P + I++ +L DSGASH+FIS N++ V L+
Sbjct: 695 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 754
Query: 173 PITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
P+ T P GV+ A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 755 PLLITTPEGVM-------TAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 804
>gi|38568042|emb|CAE05353.3| OSJNBa0065J03.12 [Oryza sativa Japonica Group]
Length = 1599
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 591 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 627
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 628 RGRVNHVTAEDVLTTPDVIIGMFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 687
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 688 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 737
>gi|20503033|gb|AAM22721.1|AC092388_5 putative polyprotein [Oryza sativa Japonica Group]
gi|31431879|gb|AAP53591.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 658 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 694
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 695 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 754
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 755 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDSKNLDVILGMNWL 804
>gi|242095932|ref|XP_002438456.1| hypothetical protein SORBIDRAFT_10g020014 [Sorghum bicolor]
gi|241916679|gb|EER89823.1| hypothetical protein SORBIDRAFT_10g020014 [Sorghum bicolor]
Length = 1414
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 59/200 (29%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHR--CRKQELQVVLLQEYEAEAQAVEDVGQERE 108
R+L+ E + G+CY C+E +S GH CR+ + ++ E +
Sbjct: 264 RRLSTEEQAERRRLGICYNCNEPYSRGHNRVCRR----IFYIEGVELD------------ 307
Query: 109 LESKPTEGAKNQVVEV-SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
EGA + V SL++V G+ T++L + + + L D+G++H+FI +
Sbjct: 308 ------EGAAAEEAPVFSLHAVAGVPGTNTIQLRVTVGAAEFIALIDTGSTHSFIGEDAA 361
Query: 168 LVLKLPITNTEPYGVILRTG-SATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
L I EP R G +AT A G D+++G
Sbjct: 362 RRTGLTI---EP-----RPGLTATVANGY-------------------------DVVLGT 388
Query: 227 HWLKTLGATHINWKTHSMKF 246
+W+ LG N +M F
Sbjct: 389 NWMAPLGDITWNLTAGTMAF 408
>gi|77555397|gb|ABA98193.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1759
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 627 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 663
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 664 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVSFVGRNQLGVERLRN 723
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 724 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 773
>gi|240255487|ref|NP_683651.4| ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein
[Arabidopsis thaliana]
gi|332644226|gb|AEE77747.1| ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein
[Arabidopsis thaliana]
Length = 818
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 180 YGVILRTGS------ATKAQGICRGVGLILQGVEIVEDFLPLDL--GITDIIMGIHWLKT 231
YG IL+ A+ + C+ + L + ++IVED+ DL + D+I+G WL
Sbjct: 484 YGYILQQEVSFSYRLASDVKRSCQEISLRINDIDIVEDYCVWDLKRDVVDVILGYEWLSK 543
Query: 232 LGATHINWKTHSMKF 246
LG T +NW+ S F
Sbjct: 544 LGETEVNWQNQSFSF 558
>gi|108864166|gb|ABA92236.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1636
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 658 LCFNC---FEPGHFTDKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 694
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 695 RGRVNHVTAEDVLTTPDIIVGTFLIHSIPATILFDSGASHSFISVTFVGRNQLGVERLRN 754
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 755 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 804
>gi|38344714|emb|CAE05256.2| OSJNBb0115I09.18 [Oryza sativa Japonica Group]
Length = 1134
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 114 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 150
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 151 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 210
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 211 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDSKNLDVILGMNWL 260
>gi|108706173|gb|ABF93968.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2453
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLC+ C E++ H+C V+ + EA + + VG + E A+ ++ V
Sbjct: 2292 GLCFTCGERWGRDHKCASTVQLHVMEELLEALQEDDDPVGDDIVAE------AEGTLMAV 2345
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
S ++ G+ S K++++ + ++++L DSG++H+FI +V L T + P + +
Sbjct: 2346 SSQAIAGVESSKSIRVRGWVQGLELLMLVDSGSTHSFIDEQVARKLAGIQTLSHPVQIKI 2405
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDF 212
G + +QG +F
Sbjct: 2406 ADGGTMQCDRSIPNCNWWIQGCSFRTEF 2433
>gi|58532066|emb|CAI44654.1| OSJNBa0004L19.17 [Oryza sativa Japonica Group]
Length = 1370
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 647 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 683
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 684 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 743
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 744 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 793
>gi|77555686|gb|ABA98482.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1803
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 639 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 675
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 676 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 735
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 736 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 785
>gi|70720828|emb|CAI44646.2| OSJNBa0057M08.21 [Oryza sativa Japonica Group]
Length = 1202
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 539 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 575
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 576 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 635
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 636 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 685
>gi|15451606|gb|AAK98730.1|AC090485_9 Putative mutator-like transposase [Oryza sativa Japonica Group]
Length = 2421
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLC+ C E++ H+C V+ + EA + + VG + E A+ ++ V
Sbjct: 2260 GLCFTCGERWGRDHKCASTVQLHVMEELLEALQEDDDPVGDDIVAE------AEGTLMAV 2313
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
S ++ G+ S K++++ + ++++L DSG++H+FI +V L T + P + +
Sbjct: 2314 SSQAIAGVESSKSIRVRGWVQGLELLMLVDSGSTHSFIDEQVARKLAGIQTLSHPVQIKI 2373
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDF 212
G + +QG +F
Sbjct: 2374 ADGGTMQCDRSIPNCNWWIQGCSFRTEF 2401
>gi|108862564|gb|ABA97616.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1423
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 36/192 (18%)
Query: 44 AHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAV 100
A G+G R ++Q Q LC+ C F PGH +C K Q + QA
Sbjct: 625 AQSGQGRR-----DVQGPQR--LCFNC---FEPGHFADKCPKPRRQ---------QGQA- 664
Query: 101 EDVGQERELESKPTEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGA 157
+ G K+ V+ +N V LT+P + I++ +L DSGA
Sbjct: 665 ---------PPRSNNGGKD-VIRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGA 714
Query: 158 SHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDL 217
SH+FIS V +L + +I G A+ V + +QG+ D + LD
Sbjct: 715 SHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPTVPIEIQGIPFPSDLILLDT 774
Query: 218 GITDIIMGIHWL 229
D+I+G++WL
Sbjct: 775 KNLDVILGMNWL 786
>gi|21742535|emb|CAD40160.1| OSJNBb0069N01.2 [Oryza sativa Japonica Group]
gi|38344505|emb|CAE05184.2| OSJNBa0013A04.21 [Oryza sativa Japonica Group]
Length = 1717
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKN---QVV 122
LC+ C F PGH K + R + +P + N V+
Sbjct: 587 LCFNC---FEPGHFADK--------------------CPKPRRQQGQPPPRSNNGGKDVI 623
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 624 RDRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 683
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 684 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 733
>gi|116317857|emb|CAH65888.1| OSIGBa0096I22.1 [Oryza sativa Indica Group]
Length = 1635
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 578 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 614
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 615 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 674
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 675 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 724
>gi|20143546|gb|AAM12303.1|AC091680_4 putative polyprotein [Oryza sativa Japonica Group]
Length = 1658
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 761 VNSAPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRDIRATKICSEVNLRI 820
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 821 EEVDFLAKPIVLDSQSLDIILGMDWL 846
>gi|53981932|gb|AAV25050.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1804
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 640 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 676
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 677 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 736
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 737 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 786
>gi|110289463|gb|AAP54732.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1663
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 766 VNSAPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRDIRATKICSEVNLRI 825
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 826 EEVDFLAKPIVLDSQSLDIILGMDWL 851
>gi|62733085|gb|AAX95202.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549495|gb|ABA92292.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1795
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 631 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 667
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 668 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 727
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 728 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 777
>gi|77551176|gb|ABA93973.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 714
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N++ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 456 VNSEPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 515
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 516 EEVDFLAKPIVLDSQSLDIILGMDWL 541
>gi|62732761|gb|AAX94880.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549451|gb|ABA92248.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1849
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 685 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 721
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 722 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 781
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 782 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 831
>gi|34015131|gb|AAQ56328.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 964
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+++ VL DSGA+H+F++ KLPI+ P ++ S A+ I R + +
Sbjct: 275 VHSYPASVLFDSGATHSFVTKGFASDHKLPISRLHPPLIVTSPDSEIIAEFISRDTKIAI 334
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
QGVE + L D+I+G+ W+
Sbjct: 335 QGVEFTAELTILHTKGLDVILGMDWM 360
>gi|38347259|emb|CAE05306.2| OSJNBa0056L23.4 [Oryza sativa Japonica Group]
Length = 1785
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 621 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 657
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 658 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 717
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 718 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 767
>gi|38344634|emb|CAE05067.2| OSJNBa0094P09.6 [Oryza sativa Japonica Group]
Length = 1803
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 639 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 675
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 676 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 735
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 736 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 785
>gi|110289019|gb|ABB47436.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1504
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 340 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 376
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 377 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 436
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+++G++WL
Sbjct: 437 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVVLGMNWL 486
>gi|54287622|gb|AAV31366.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1826
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 685 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 721
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 722 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 781
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 782 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 831
>gi|77556043|gb|ABA98839.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1756
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 639 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 675
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 676 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 735
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 736 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 785
>gi|54287627|gb|AAV31371.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1820
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 656 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 692
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 693 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 752
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 753 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 802
>gi|108708189|gb|ABF95984.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1804
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 640 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 676
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 677 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 736
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 737 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 786
>gi|38344564|emb|CAD39906.2| OSJNBa0065B15.10 [Oryza sativa Japonica Group]
Length = 1500
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 105 QERELESKPTEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNF 161
Q+ + +P G K+ V +N V LT+P + I++ +L DSGASH+F
Sbjct: 469 QQGQAPPRPNNGGKD-VTRGRVNHVTAEDMLTTPDVIVGTFLIHSIPATILFDSGASHSF 527
Query: 162 ISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITD 221
IS V +L + +I G A+ V + +QG+ D + LD D
Sbjct: 528 ISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLD 587
Query: 222 IIMGIHWL 229
+I+G++WL
Sbjct: 588 VILGMNWL 595
>gi|13992680|gb|AAK51574.1|AC022352_10 Putative retroelement [Oryza sativa Japonica Group]
gi|31431004|gb|AAP52842.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1810
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 646 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 682
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 683 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 742
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 743 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 792
>gi|77552428|gb|ABA95225.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1795
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 631 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 667
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 668 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 727
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 728 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 777
>gi|77555643|gb|ABA98439.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 625 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 661
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 662 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 721
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 722 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 771
>gi|108862685|gb|ABA98546.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1800
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 662 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 698
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 699 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 758
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 759 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 808
>gi|22725911|gb|AAN04921.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31430214|gb|AAP52160.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1786
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 622 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 658
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 659 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 718
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 719 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 768
>gi|50300512|gb|AAT73655.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1747
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 606 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 642
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 643 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 702
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 703 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 752
>gi|22725935|gb|AAN04945.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431096|gb|AAP52927.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1825
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 661 LCFNC---FEPGHYADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 697
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 698 RGRVNHVTAKDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 757
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 758 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 807
>gi|50300545|gb|AAT73686.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1498
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 334 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 370
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 371 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 430
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 431 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 480
>gi|22857594|gb|AAN09868.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1802
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 638 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 674
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 675 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 734
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 735 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 784
>gi|110288804|gb|ABG65986.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1840
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 676 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 712
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 713 RGRVNHVTAEDELTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 772
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 773 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 822
>gi|108708200|gb|ABF95995.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1804
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 640 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 676
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 677 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 736
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 737 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 786
>gi|77554515|gb|ABA97311.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1475
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 44 AHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAV 100
A G+G R ++Q Q LC+ C F PGH +C K Q + +A
Sbjct: 323 AQSGQGRR-----DVQGPQR--LCFNC---FEPGHFADKCPKSRRQ-------QGQAPPC 365
Query: 101 EDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHN 160
+ G + + + +V V+ V LT+P + I++ +L DSGASH+
Sbjct: 366 SNNGGK--------DVIRGRVNHVTAEDV--LTTPDVIVGTFLIHSIPATILFDSGASHS 415
Query: 161 FISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT 220
FIS V +L + +I G A+ V + +QG+ D + LD
Sbjct: 416 FISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNL 475
Query: 221 DIIMGIHWL 229
D+I+G++WL
Sbjct: 476 DVILGMNWL 484
>gi|242065034|ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075 [Sorghum bicolor]
gi|241933637|gb|EES06782.1| hypothetical protein SORBIDRAFT_04g018075 [Sorghum bicolor]
Length = 1414
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%)
Query: 127 NSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRT 186
+ V G+ T+++ + V L DSG++HNFI+ E L + ++
Sbjct: 285 DPVAGVPLADTMQVRVSVGTATFVALLDSGSTHNFIAEEAARRTGLRVQPRARMTAMVAN 344
Query: 187 GSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
G G+ R + + D + L DI++G W+ TLG ++ S+ F
Sbjct: 345 GEKIPCPGVIRHAPVTIDNTTFAIDLFVMPLAGYDIVLGTQWMATLGPIVWDFAARSLSF 404
>gi|77555127|gb|ABA97923.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1758
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 628 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 664
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 665 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 724
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 725 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 774
>gi|57834136|emb|CAE05577.3| OSJNBa0032N05.5 [Oryza sativa Japonica Group]
Length = 1790
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 626 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 662
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 663 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 722
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 723 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 772
>gi|22539073|gb|AAN01245.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431331|gb|AAP53126.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1785
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 621 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 657
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 658 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 717
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 718 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 767
>gi|116311097|emb|CAH68025.1| OSIGBa0136O08-OSIGBa0153H12.3 [Oryza sativa Indica Group]
Length = 1826
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 662 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 698
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 699 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 758
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 759 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 808
>gi|110288767|gb|AAP52585.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1797
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 633 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 669
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 670 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 729
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 730 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 779
>gi|78708031|gb|ABB47006.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1826
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 43/177 (24%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C+K Q + QA + G K+ V+
Sbjct: 662 LCFNC---FEPGHFADKCQKPGRQ---------QGQA----------PPRSNNGGKD-VI 698
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VLVLKL 172
+N V LT+P + +++ +L DSGASH+FIS N++ V L+
Sbjct: 699 WGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVQRLRN 758
Query: 173 PITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
P+ T P GV++ A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 759 PLLITTPGGVMI-------AKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 808
>gi|58532059|emb|CAD40391.3| OSJNBa0004L19.10 [Oryza sativa Japonica Group]
Length = 515
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 155 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 191
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+F+S V +L +
Sbjct: 192 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFMSVPFVGRNQLGVERLRN 251
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 252 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 301
>gi|48926660|gb|AAT47449.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1943
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 626 LCFNC---FEPGHFADKCPKPRRQ---------KGQA----------PPRSNNGGKD-VI 662
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 663 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 722
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 723 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 772
>gi|38346257|emb|CAE02079.2| OSJNBa0074B10.7 [Oryza sativa Japonica Group]
Length = 1287
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 31/179 (17%)
Query: 57 ELQSNQECGLCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKP 113
++Q Q LC+ C F PGH +C K + + QA +P
Sbjct: 233 DIQGQQR--LCFNC---FEPGHFADKCPKPRRK---------QGQA----------PPRP 268
Query: 114 TEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
G K+ V+ N V LT+P + I++ +L DSGASH+FIS V
Sbjct: 269 NNGGKD-VIRGRANHVTTEDVLTTPDVIVDTFLIHSILATILFDSGASHSFISVPFVGRN 327
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+L + +I G A V + +QG+ D + LD D+I+G++WL
Sbjct: 328 QLGVERLRNPLLITTPGGVMTAMYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 386
>gi|52353726|gb|AAU44292.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1816
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 23/167 (13%)
Query: 66 LCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVS 125
LC+ C F PGH K + Q+ + + G K+ V+
Sbjct: 652 LCFNC---FEPGHFADK----------------CPQPRRQQGQAPPRSNNGGKD-VIRGR 691
Query: 126 LNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
+N V LT+P + +++ +L DSGASH+FIS V +L + +
Sbjct: 692 VNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLL 751
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 752 ITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 798
>gi|58532065|emb|CAE05987.3| OSJNBa0004L19.16 [Oryza sativa Japonica Group]
Length = 1731
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 601 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 637
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+F+S V +L +
Sbjct: 638 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFMSVPFVGRNQLGVERLRN 697
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 698 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 747
>gi|108862432|gb|ABA97314.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1219
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%)
Query: 131 GLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSAT 190
G + +++ + K+V++L DSG++ +FI++++ L+ +T P V + GS
Sbjct: 391 GFETVGCMRMLGYVQGKEVLILVDSGSTTSFITSKIAQTLQGVVTLEPPVQVKVANGSIL 450
Query: 191 KAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
+ QG D L+LG DII+G+ WL ++W
Sbjct: 451 TCLSSVLRCEWMTQGWVFYTDLKVLNLGSYDIILGMDWLMAHSPMQVDW 499
>gi|38347301|emb|CAE02296.2| OSJNBa0042F21.3 [Oryza sativa Japonica Group]
gi|38347573|emb|CAE05006.2| OSJNBb0093G06.14 [Oryza sativa Japonica Group]
Length = 1529
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Query: 105 QERELESKPTEGAKN----QVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHN 160
Q+ + +P G K+ +V V+ V LT+P + I++ +L DSGASH+
Sbjct: 606 QQGQAPPRPNNGGKDVNRGRVNHVTAEDV--LTTPDVIVGTFLIHSIPATILFDSGASHS 663
Query: 161 FISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT 220
FIS V +L + +I G A+ V + +QG+ D + LD
Sbjct: 664 FISVPFVGRNQLGVERLRNPLIITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNL 723
Query: 221 DIIMGIHWL 229
D+I+G++WL
Sbjct: 724 DVILGMNWL 732
>gi|18652524|gb|AAL77157.1|AC091732_8 Putative polyprotein [Oryza sativa Japonica Group]
gi|31431769|gb|AAP53495.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1839
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C + PGH +C K Q + QA + G K+ V+
Sbjct: 675 LCFNC---YEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 711
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 712 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLRVERLRN 771
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 772 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 821
>gi|50300539|gb|AAT73680.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1499
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 335 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 371
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + + + +L DSGASH+FIS V +L +
Sbjct: 372 RGRVNHVTAEDVLTTPDVIVGTFLVQSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 431
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 432 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 481
>gi|34015184|gb|AAQ56379.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1689
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 43/177 (24%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
+C+ C F PGH +C K Q + QA +P G K+ V
Sbjct: 565 VCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VT 601
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VLVLKL 172
+N V LT+P + I++ +L DSG SH+FIS N++ V L+
Sbjct: 602 RGRVNHVTAEDVLTTPDIIVGTFLIHSIPATILFDSGPSHSFISMPFVGRNQLGVERLRN 661
Query: 173 PITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
P+ T P GV+ A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 662 PLLITTPRGVM-------TAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 711
>gi|147769575|emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]
Length = 446
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 34 NSDRIVQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRK 82
+++ V P R+L+ E++ ++ GLC+ CDEKF+PGHRC+K
Sbjct: 323 STNSTVTSRPLSSTPAIRRLSPTEMKERRDKGLCFNCDEKFAPGHRCKK 371
>gi|50878387|gb|AAT85162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1152
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 663 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 699
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + ++ +L DSGASH+FIS V +L +
Sbjct: 700 RGRVNHVTAEDVLTTPDVIVGTFLVHPIPATILFDSGASHSFISVPFVGRNQLGVERLRN 759
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 760 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 809
>gi|110289632|gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1759
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 110 ESKPTEGAKNQVVEVSLN----------SVVGLTSPKTLKLASEINNKKVVVLTDSGASH 159
+S+P+ A Q VS N + +P + +N+ +VL DSGASH
Sbjct: 620 QSRPSSQASGQGSRVSNNFGRGRVNHIQAETAQDAPDVVMGMFSVNSVPAIVLFDSGASH 679
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGI 219
+FIS V N ++ G +A IC V L ++ V+ + + LD
Sbjct: 680 SFISQAFVKRNGWKTQNLRVPMIVHFPGRNIRATQICPEVNLRIEEVDFLAKPIVLDSQS 739
Query: 220 TDIIMGIHWL 229
DII+G+ WL
Sbjct: 740 LDIILGMDWL 749
>gi|18425257|gb|AAL69435.1|AC098565_17 Putative polyprotein [Oryza sativa]
gi|22725905|gb|AAN04915.1| Putative polyprotein [Oryza sativa Japonica Group]
gi|31430208|gb|AAP52154.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 105 QERELESKPTEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNF 161
Q+ + +P G K+ V+ +N V LT+P + I++ +L DSGASH+F
Sbjct: 283 QQGQAPPRPNNGGKD-VIRGRVNHVTAEDMLTTPGVIVGTFLIHSIPATILFDSGASHSF 341
Query: 162 ISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITD 221
IS V +L + +I G A+ V + +QG+ D + LD D
Sbjct: 342 ISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGILFPSDLILLDTKNLD 401
Query: 222 IIMGIHWL 229
+I+G+ WL
Sbjct: 402 VILGMKWL 409
>gi|38345510|emb|CAE01794.2| OSJNBa0039K24.13 [Oryza sativa Japonica Group]
Length = 1851
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 110 ESKPTEGAKNQVVEVS----------LNSVVGLTSPKTLKLASEINNKKVVVLTDSGASH 159
+S+P+ A Q S + + + +P + +N+ +VL DSGASH
Sbjct: 712 QSRPSSQASGQGSRASNHFGRGRVNHIQAEIAQDAPDVVMGMFSVNSVPAIVLFDSGASH 771
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGI 219
+FIS V N ++ G +A IC V L ++ V+ + + LD
Sbjct: 772 SFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRIEEVDFLAKPIVLDSQS 831
Query: 220 TDIIMGIHWL 229
DII+G+ WL
Sbjct: 832 LDIILGMDWL 841
>gi|22138463|gb|AAM93447.1| putative polyprotein [Oryza sativa Japonica Group]
gi|78708018|gb|ABB46993.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1499
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + +A + G + + ++ +V
Sbjct: 335 LCFNC---FEPGHFADKCPKPRRQ-------QGQAPPRSNNGGK--------DVSRGRVN 376
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
V+ V LT+P + +++ +L DSGASH+FIS V +L + +
Sbjct: 377 HVTAEDV--LTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLL 434
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 435 ITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 481
>gi|116309666|emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
Length = 1434
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 31 GGFNSDRIVQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQE-LQVVL 89
GGFN+++ V A+ G +E C+ C E +S H+CR ++ + ++
Sbjct: 389 GGFNNNKNVGQKGANTG------------GEREKKTCWYCKEPWSYQHKCRTRKVIHMME 436
Query: 90 LQEYEAEAQAVEDVGQERELESKPTEGAKN------QVVEVSLNSVVGLTSPKTLKLASE 143
E E E + QE E ++ P AK Q++++S +++ G T L +
Sbjct: 437 EVEDEKEESGSPEENQEGEYQTAPGSPAKKEDDNEEQLMQISTHAIQGTYGINTFSLITY 496
Query: 144 INNKKVVVLTDSGASHNFISNEVVL 168
+ +K V L DSG+++ F++ E L
Sbjct: 497 VKGRKAVALVDSGSTNTFMNYEFAL 521
>gi|78708041|gb|ABB47016.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1849
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 685 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 721
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 722 WGRVNHVTAEDLLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 781
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 782 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 831
>gi|218185713|gb|EEC68140.1| hypothetical protein OsI_36060 [Oryza sativa Indica Group]
Length = 227
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 151 VLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVE 210
VL DSGA+H+FIS V +P + + I + IC+ + + G E+
Sbjct: 120 VLFDSGATHSFISTNFVRKYTIPTSQLKERICIETPLDSQITNLICKLCPITIDGWELTA 179
Query: 211 DFLPLDLGITDIIMGIHWL 229
D +PLD+ DII+G+ WL
Sbjct: 180 DLIPLDMHDFDIILGMDWL 198
>gi|13992691|gb|AAK51585.1|AC022352_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1862
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G ++ V+
Sbjct: 698 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGRD-VI 734
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 735 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 794
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 795 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 844
>gi|21743214|emb|CAD40069.1| OSJNBa0085C10.22 [Oryza sativa Japonica Group]
Length = 1639
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + +A + G + + A+ +V
Sbjct: 534 LCFNC---FEPGHFADKCPKPRRQ-------QGQAPPRSNNGGK--------DVARGRVN 575
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
V+ V LT+P + ++ +L DSGASH+FIS V +L + +
Sbjct: 576 HVTAEDV--LTTPDVIVGTFLFHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLL 633
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 634 ITTPGGDMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 680
>gi|147855151|emb|CAN81740.1| hypothetical protein VITISV_009674 [Vitis vinifera]
Length = 771
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 8/111 (7%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKA 192
++PKT+++A++I + V++L DS ++HN IS + +L+L + + + V + G +
Sbjct: 94 STPKTMQVATKIGAQDVIILIDSESTHNLISERLTNLLRLLVVPMKTFIVRVSNGEHLRC 153
Query: 193 QGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHI---NWK 240
QG V + LQG L L D+++G + G++++ NW+
Sbjct: 154 QGQFEEVQVDLQGTSFSLTLYSLPLIGLDVVLGFN-----GSSYLALWNWR 199
>gi|108862640|gb|ABA98065.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1686
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 619 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 678
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 679 EEVDFLAKPIVLDSQSMDIILGMDWL 704
>gi|78708125|gb|ABB47100.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1821
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G ++ V+
Sbjct: 657 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGRD-VI 693
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 694 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 753
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 754 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 803
>gi|38344635|emb|CAE05068.2| OSJNBa0094P09.7 [Oryza sativa Japonica Group]
Length = 1804
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 640 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 676
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 677 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 736
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 737 PLLITTPGGVMTAKYYSPAVPIEIQGILFPSDLILLDTKNLDVILGMNWL 786
>gi|147809918|emb|CAN71623.1| hypothetical protein VITISV_025787 [Vitis vinifera]
Length = 569
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 52 KLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELES 111
KL+ ELQ ++ GLCY CDEK++ GH+C+K + + E E E
Sbjct: 161 KLSPTELQRRRQQGLCYNCDEKYTMGHKCKK-----------------LFFIELEEENEE 203
Query: 112 KPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVV 151
E + + +SL+++ G+ SP+T+++ S+I + + V
Sbjct: 204 AIEEEYVEETLAISLHALAGVQSPQTMRIHSQIGSGPICV 243
>gi|13129464|gb|AAK13122.1|AC080019_14 Polyprotein [Oryza sativa Japonica Group]
Length = 2017
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + +A + G + + + +V
Sbjct: 912 LCFNC---FEPGHFADKCPKPRHQ-------QGQAPPCSNNGGKDVI--------RGRVN 953
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
V+ V LT+P + I++ +L DSGASH+FIS + +L I +
Sbjct: 954 HVTAEDV--LTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFMGRNQLGIERLRNPLL 1011
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 1012 ITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 1058
>gi|77556838|gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1851
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|62734515|gb|AAX96624.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550173|gb|ABA92970.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1509
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 111 SKPTEGAKNQVVEVS-------LNSVVGLTS---PKTLKLASEINNKKVVVLTDSGASHN 160
S+P A+ Q S +N + T+ P + +N+ +VL DSGASH+
Sbjct: 474 SRPNSQARGQGSRASNNFGRGRMNHIQAETAQDVPDVVMGMFSVNSVPAIVLFDSGASHS 533
Query: 161 FISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT 220
FIS V N ++ G +A IC V L ++ V+ + + LD
Sbjct: 534 FISQAFVKRNGWKTQNLHVPMIVHSPGRNIRATQICPEVNLRIEEVDFLAKPIVLDSQSL 593
Query: 221 DIIMGIHWL 229
DII+G+ WL
Sbjct: 594 DIILGMDWL 602
>gi|116309657|emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]
Length = 1851
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|116310101|emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group]
Length = 1877
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 782 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 841
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 842 EEVDFLAKPIVLDSQSLDIILGMDWL 867
>gi|90265261|emb|CAD79706.2| H0302E05.9 [Oryza sativa Indica Group]
Length = 1820
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|147861322|emb|CAN83996.1| hypothetical protein VITISV_031193 [Vitis vinifera]
Length = 499
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 134 SPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQ 193
S +T+++++++ +++VL DSG++HNFI+ + +L+LP+ EP+ V + G K Q
Sbjct: 70 SARTMRVSAKVGPHELIVLIDSGSTHNFINERIAELLQLPMVPIEPFNVKVANGDPLKCQ 129
Query: 194 GICRGVGLILQGVEIVEDFL 213
L V I + FL
Sbjct: 130 ERA------LNAVTIKDRFL 143
>gi|77553813|gb|ABA96609.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1556
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 477 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 536
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 537 EEVDFLAKPIVLDSQSLDIILGMDWL 562
>gi|46391139|gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733908|gb|AAV59415.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1649
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 624 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 683
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 684 EEVDFLAKPIVLDSQSLDIILGMDWL 709
>gi|20177619|gb|AAM14674.1|AC097446_3 Putative polyprotein [Oryza sativa Japonica Group]
gi|22725914|gb|AAN04924.1| Putative polyprotein [Oryza sativa Japonica Group]
gi|110288618|gb|ABB46768.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1433
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C + PGH +C K Q + +A + G N V+
Sbjct: 340 LCFNC---YEPGHFADKCPKPRRQ-------QGKAPPRSNNG-------------GNDVI 376
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 377 RGRVNHVTAENVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 436
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 437 PLLITTPGVVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 486
>gi|90265203|emb|CAH67719.1| H0613A10.2 [Oryza sativa Indica Group]
Length = 1809
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|31432239|gb|AAP53894.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1829
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|38347631|emb|CAE05227.2| OSJNBa0011K22.9 [Oryza sativa Japonica Group]
Length = 1699
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V
Sbjct: 663 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VT 699
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ L DSGASH+FIS V +L +
Sbjct: 700 RGRVNHVTAEDVLTTPDVIVGTFLIHSVPATTLFDSGASHSFISVPFVGRNQLGVERLRN 759
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 760 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 809
>gi|38567665|emb|CAE75948.1| B1159F04.11 [Oryza sativa Japonica Group]
Length = 1679
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 23/167 (13%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + +A + G + T G N V
Sbjct: 643 LCFNC---FEPGHFADKCPKPRRQ-------QGQAPPRSNNGGK-----DVTRGRVNHVT 687
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
+ LT+P + I++ L DSGASH+FIS V +L + +
Sbjct: 688 AEDV-----LTTPDVIVGTFLIHSVPATTLFDSGASHSFISVPFVGRNQLGVERLRNPLL 742
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 743 ITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 789
>gi|32489382|emb|CAE04228.1| OSJNBa0011F23.1 [Oryza sativa Japonica Group]
Length = 1787
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 14/173 (8%)
Query: 67 CYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSL 126
C++C++ +C + L + A+ +S+P+ A Q S
Sbjct: 673 CFRCNQMGHYARQCPQNPTNTSLGHANGSTARTPTPAA----AQSRPSSQASGQGSRASN 728
Query: 127 N----------SVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITN 176
N + +P + +N+ +VL DSGASH+FIS V N
Sbjct: 729 NFGRGRVNHIQAETAQDAPDVVMGMFSVNSIPAIVLFDSGASHSFISQAFVKRNGWKTQN 788
Query: 177 TEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
++ G +A +C V L ++ V+ + + LD DII+G+ WL
Sbjct: 789 LRVPMIVHSPGRNIRATQVCPEVNLRIEEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|108862469|gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1807
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 712 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 771
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 772 EEVDFLAKPIVLDSQSLDIILGMDWL 797
>gi|78708466|gb|ABB47441.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1802
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + +A + G + + + +V
Sbjct: 672 LCFNC---FEPGHFADKCPKPRHQ-------QGQAPPCSNNGGK--------DVIRGRVN 713
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
V+ V LT+P + I++ +L DSGASH+FIS + +L I +
Sbjct: 714 HVTAEDV--LTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFMGRNQLGIERLRNPLL 771
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 772 ITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 818
>gi|18378609|gb|AAL68642.1|AF458766_1 polyprotein [Oryza sativa Japonica Group]
Length = 677
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 118 KNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNT 177
K+ ++ + ++ G S + ++ I K+++L DSG+SH+F+ +V ++ +
Sbjct: 13 KDSLMALLASACNGTDSTHSFRVKGLIQGTKLLMLIDSGSSHSFLDENIVQTMQGVTSLP 72
Query: 178 EPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHI 237
+P V + +G LQG +F L L D I+GI WL+ LG I
Sbjct: 73 QPVKVKVASGEVLICDKQLPDYAWWLQGRCYRTNFKLLSLPGYDAILGIDWLQGLGVMRI 132
Query: 238 NW 239
W
Sbjct: 133 IW 134
>gi|15217334|gb|AAK92672.1|AC090714_5 putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 384 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 443
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 444 EEVDFLAKPIVLDSQSLDIILGMDWL 469
>gi|77551972|gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1747
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 673 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICLEVNLRI 732
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 733 EEVDFLAKPIVLDSQSLDIILGMDWL 758
>gi|90265087|emb|CAH67759.1| H0124E07.6 [Oryza sativa Indica Group]
Length = 368
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 112 KPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLK 171
K A+ + +SL+++ G S T++L + + N+ +++ DSG+SH+F+++++ L+
Sbjct: 202 KEYRRAQEEDFNLSLHALAGTCSSATVQLRALVGNQVILIFVDSGSSHSFVNSDLCAKLQ 261
Query: 172 LPITNTEPYGVILRTG 187
LP T T P V + G
Sbjct: 262 LPTTATLPISVKVANG 277
>gi|62954893|gb|AAY23262.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77548962|gb|ABA91759.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1416
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 408 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 467
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 468 EEVDFLAKPIVLDSQSLDIILGMDWL 493
>gi|38347655|emb|CAE05045.2| OSJNBa0049H08.6 [Oryza sativa Japonica Group]
Length = 1523
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++L G +A IC V +
Sbjct: 616 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVLSPGRNIRATRICPEVNHRI 675
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 676 EEVDFLAKPIVLDSQSLDIILGMDWL 701
>gi|21741597|emb|CAD39713.1| OSJNBa0052P16.18 [Oryza sativa Japonica Group]
Length = 1804
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + +A + G + + + +V
Sbjct: 640 LCFNC---FEPGHFADKCPKPRRQ-------QGQAPPRSNNGGQ--------DVIRGRVN 681
Query: 123 EVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
V+ V LT+P + +++ +L DSGASH+FIS V +L + +
Sbjct: 682 HVTAEDV--LTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLL 739
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 740 ITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 786
>gi|32480101|emb|CAE01992.1| OSJNBb0033G08.8 [Oryza sativa Japonica Group]
Length = 368
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 112 KPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLK 171
K A+ + +SL+++ G S T++L + + N+ +++ DSG+SH+F+++++ L+
Sbjct: 202 KEYRRAQEEDFNLSLHALAGTCSSATVQLRALVGNQVILIFVDSGSSHSFVNSDLCAKLQ 261
Query: 172 LPITNTEPYGVILRTG 187
LP T T P V + G
Sbjct: 262 LPTTATLPISVKVANG 277
>gi|62701928|gb|AAX93001.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77548823|gb|ABA91620.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1761
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 690 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 749
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 750 EEVDFLAKPIVLDSQSLDIILGMDWL 775
>gi|116309223|emb|CAH66314.1| OSIGBa0115J08.1 [Oryza sativa Indica Group]
gi|116309615|emb|CAH66670.1| OSIGBa0110B10.7 [Oryza sativa Indica Group]
Length = 1603
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++L G +A IC V +
Sbjct: 616 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVLSPGRNIRATRICPEVNHRI 675
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 676 EEVDFLAKPIVLDSQSLDIILGMDWL 701
>gi|116311106|emb|CAH68033.1| OSIGBa0139N19-OSIGBa0137L10.2 [Oryza sativa Indica Group]
Length = 1680
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 752 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSLGRNIRATQICPEVNLKI 811
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 812 EEVDFLAKPIVLDSQSLDIILGMDWL 837
>gi|38345968|emb|CAE04051.2| OSJNBb0062B06.9 [Oryza sativa Japonica Group]
Length = 1680
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 752 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSLGRNIRATQICPEVNLKI 811
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 812 EEVDFLAKPIVLDSQSLDIILGMDWL 837
>gi|90399274|emb|CAJ86189.1| H0306F03.2 [Oryza sativa Indica Group]
Length = 1135
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 140 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 199
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 200 EEVDFLAKPIVLDSQSLDIILGMDWL 225
>gi|54287528|gb|AAV31272.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54287632|gb|AAV31376.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1784
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 620 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 656
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 657 RGRVNHATAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 716
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 717 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 766
>gi|77552465|gb|ABA95262.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1481
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 408 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 467
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 468 KEVDFLAKPIVLDSQSLDIILGMDWL 493
>gi|77556493|gb|ABA99289.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K + ++ +A + G K+ V+
Sbjct: 641 LCFNC---FEPGHFADKCPKP-------RRHQGQA------------PPRSNNGGKD-VI 677
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 678 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 737
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 738 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 787
>gi|322699332|gb|EFY91094.1| pol protein [Metarhizium acridum CQMa 102]
Length = 874
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPIT-NTEPYGVILRTGSATK-AQGICR-GVG 200
I +K+ + DSGA NFIS +V L+LP T EPY + G+ K + G+ +
Sbjct: 6 IMGRKIQAMIDSGAQGNFISPNLVNRLRLPWTPKDEPYRLTTVEGTTVKYSHGVVDMEIA 65
Query: 201 LILQGVEIVEDFLPLDLGIT---DIIMGIHWLKTLGATHINWKTHSMKFN 247
+L ++ + + LD+ + D+I+GI WL+ +NW+T ++++
Sbjct: 66 QLLVDIQGTKHRVTLDITVISKHDVILGIPWLRA-SNPRVNWRTGQLQWD 114
>gi|357510711|ref|XP_003625644.1| Serine carboxypeptidase [Medicago truncatula]
gi|355500659|gb|AES81862.1| Serine carboxypeptidase [Medicago truncatula]
Length = 712
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 18/226 (7%)
Query: 42 YPAHEGRGFRKLTEAELQSNQECGL---CYKCDEKFSPGHRCRKQELQVVL-------LQ 91
Y A +G +K+ + ++ + CYKC EK + C + + + L
Sbjct: 312 YSAPADKGKQKMGDDRRPKRRDAPVEIVCYKCGEKGHKSNVCGRDDRKCFRCGQKGHSLA 371
Query: 92 EYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKL---ASEINNKK 148
E + + E + S+ E K ++ + ++ G +P +L N+
Sbjct: 372 ECKRGDIVCYNCNGEGHISSQCPEPKKTRIGG-KVFALTGTQTPNEDRLIRGTCFFNSTP 430
Query: 149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI--LRTGSATKAQGICRGVGLILQGV 206
++ + D+GA+H FI+ E L L I++ + V+ GS T + +C + + G
Sbjct: 431 LIAIIDTGATHCFIAIECAYKLGLDISDMKGEMVVETPAKGSVTTSL-VCLRCPISMFGR 489
Query: 207 EIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTI 252
+ V D + L L D+I G++WL+ HIN + ++ F++ + I
Sbjct: 490 DFVIDLVCLPLTGMDVIFGMNWLE-YNRVHINCFSKTVHFSSADNI 534
>gi|77554997|gb|ABA97793.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1435
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 342 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 378
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 379 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 438
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G + V + +QG+ D + LD D+I+G++WL
Sbjct: 439 PLLITTPGGVMTTKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 488
>gi|21672037|gb|AAM74399.1|AC119149_14 Putative retroelement [Oryza sativa Japonica Group]
gi|31431043|gb|AAP52881.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1821
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G ++ V+
Sbjct: 657 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGRD-VI 693
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 694 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRN 753
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 754 PLLITTPGGVMTAKYYSPTVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 803
>gi|110289096|gb|ABG66083.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1093
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 78 VNSIPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 137
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 138 EEVDFLAKPIVLDSQSLDIILGMDWL 163
>gi|57834100|emb|CAE04765.3| OSJNBa0079C19.6 [Oryza sativa Japonica Group]
Length = 1998
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 596 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 632
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS + +L +
Sbjct: 633 RGRVNHVTAEDVLTTPDIIVGTFLIHSIPATILFDSGASHSFISVPFMGRNQLGVERIRN 692
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 693 PLLITTPGGVMTAKYNSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 742
>gi|32487330|emb|CAE05905.1| OSJNBa0061C08.12 [Oryza sativa Japonica Group]
Length = 1971
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 569 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 605
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS + +L +
Sbjct: 606 RGRVNHVTAEDVLTTPDIIVGTFLIHSIPATILFDSGASHSFISVPFMGRNQLGVERIRN 665
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 666 PLLITTPGGVMTAKYNSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 715
>gi|356537579|ref|XP_003537304.1| PREDICTED: uncharacterized protein LOC100816964 [Glycine max]
Length = 751
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 86 QVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEIN 145
Q +LLQ E E V+ R E+ G N +S N++ G + T+K +S IN
Sbjct: 332 QYLLLQMDEDENVEVQPDPPPRIEEAM---GNLNLDHHLSYNALKGSSDLGTMKFSSTIN 388
Query: 146 NKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGI 195
V +L DSG+S NF+ + LKLPI + V++ G++ A+GI
Sbjct: 389 GMVVQILLDSGSSDNFLQPRIANCLKLPIEPASNFQVLVGNGNSLVAEGI 438
>gi|77552000|gb|ABA94797.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 755 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRAIQICPEVNLRI 814
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 815 EEVDFLAKPIVLDSQSLDIILGMDWL 840
>gi|307136368|gb|ADN34181.1| retrotransposon protein [Cucumis melo subsp. melo]
Length = 295
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 10/71 (14%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAVEDVGQER 107
++L+++E ++ + GLC++C++K+SPGHRC+ +EL + E E++G E+
Sbjct: 230 KRLSDSEFRARLDKGLCFRCNDKYSPGHRCKAKTNRELMFFITNE-------DEELGTEK 282
Query: 108 ELESKPTEGAK 118
E E + TE A+
Sbjct: 283 EKEDEVTEEAE 293
>gi|77555766|gb|ABA98562.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1824
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 110 ESKPTEGAKNQVVEVS-------LNSVVGLTS---PKTLKLASEINNKKVVVLTDSGASH 159
+S+P+ A Q S +N + T+ P + +N+ +VL DSGASH
Sbjct: 729 QSRPSSQASGQGSRASNNFGRGRMNHIQAETAQDAPDVVMGMFSVNSVPAIVLFDSGASH 788
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGI 219
+FIS V N ++ S +A IC V L ++ V+ + + LD
Sbjct: 789 SFISQAFVKRNGWKTQNLRVPMIVHSPRSNIRATQICPEVNLRIEEVDFLAKPIVLDSQS 848
Query: 220 TDIIMGIHWL 229
DII+G+ WL
Sbjct: 849 LDIILGMDWL 858
>gi|32489661|emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza sativa Japonica Group]
Length = 1851
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V + + LD DII+G+ WL
Sbjct: 816 EEVNFLAKPIVLDSQSLDIILGMDWL 841
>gi|39546224|emb|CAE04473.3| OSJNBa0029L02.14 [Oryza sativa Japonica Group]
Length = 602
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 65 GLCYKCDEKFSPGHRCRKQ-ELQVV--LLQEYEAEAQAVEDVGQERELESKPTEGAKNQV 121
GLCY C E++S H+ +L VV LL+ ++ ++ D +E++ P + +V
Sbjct: 119 GLCYTCGERWSRDHKYGPTVQLHVVEELLEFRDSSSKERGD--EEKDSAVIPNSEYEGEV 176
Query: 122 VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFIS 163
++S ++ G + TL+L I + ++++L +SG+SH+FIS
Sbjct: 177 CQISKEAMQGTETSGTLRLQGLIQHNEILMLVNSGSSHSFIS 218
>gi|338808432|gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexicana]
Length = 1604
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 151 VLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVE 210
VL D+GA+H+FI+ V LPIT I G +A IC V + ++G+
Sbjct: 508 VLFDTGATHSFITASWVEAHNLPITTMSTPIQIDSAGGRIRADSICLNVSVEIRGIAFPA 567
Query: 211 DFLPLDLGITDIIMGIHWLKTLGA 234
+ + + D+I+G++WL A
Sbjct: 568 NLIVMGTQGIDVILGMNWLDKYQA 591
>gi|15212099|emb|CAC51363.1| putative polyprotein [Cicer arietinum]
Length = 318
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 70 CDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSV 129
C H CRK E E + A VE V ++PT A+ ++ +N+
Sbjct: 88 CTANVPTCHNCRKSEHM-----ERDCTAPKVEPVVNVAR-ATRPT--ARGRIY--CMNAE 137
Query: 130 VGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSA 189
G S ++ EI + L DSGA+H+FI+ + V LKL ++ P+ +++ T
Sbjct: 138 EGNPSGNLIQRDCEIAGNTLTALFDSGATHSFIAMDCVNRLKLSVS-ALPFDLVVSTPDK 196
Query: 190 T-KAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C + +Q +++ + + L L ++I+G+ W+
Sbjct: 197 TLTVNSACLHCRMTIQNRDLLVNLICLPLQSLEVILGMDWM 237
>gi|62732982|gb|AAX95101.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77548872|gb|ABA91669.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1314
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 60/189 (31%)
Query: 65 GLCYKCDEKFSPGHRCRKQ-ELQVV--LLQEYEAEAQAVEDVGQERELESKPTEGAKNQV 121
GLC+ C EK S +RC +L VV LLQ + +E DV + ++ P E ++
Sbjct: 237 GLCHTCGEKRSQEYRCGPTVQLHVVEELLQLFPSE-----DVVESDTNDATPDEPETEEL 291
Query: 122 VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYG 181
+ +S +V+G+ SPKT++L I +V++ +S ++ P
Sbjct: 292 LAISREAVLGIESPKTMRLQGLIQRHEVLMPGESFST--------------------PLK 331
Query: 182 VILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKT 241
V+ LG ++I+G+ WL+ I+WK
Sbjct: 332 VL--------------------------------PLGCYEVILGMDWLERHSPMQIDWKL 359
Query: 242 HSMKFNTRN 250
+++F +N
Sbjct: 360 KTLQFQWQN 368
>gi|147779107|emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
Length = 1593
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEA--EAQAVEDVGQERE 108
++L+ E++ + GLC+ CDE+++PGH+CR+ +L LL E E+ EA +E+ E+E
Sbjct: 268 KRLSWEEIRKKRSLGLCFSCDERYTPGHKCRQPQL---LLMEGESGWEASEMEEPLVEQE 324
Query: 109 LE 110
E
Sbjct: 325 PE 326
>gi|284434667|gb|ADB85376.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 839
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ VL DSGASH+F+S L ++ + ++ GS C V +I+
Sbjct: 249 VNSAPATVLFDSGASHSFVSQISAAKHPLKVSTLKTALLVPSPGSELSTNQSCPQVKMII 308
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+GVE + + + ++ D+I+G+ W
Sbjct: 309 EGVEFLANLVIINTKSLDVILGMDWF 334
>gi|24414261|gb|AAN59764.1| Putative retroelement [Oryza sativa Japonica Group]
gi|108706657|gb|ABF94452.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1021
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 101 EDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHN 160
+D+ + +LE + E ++ +S+ ++ G + +++ I K+V++L DSG++ +
Sbjct: 470 DDIPDQEQLE-QLEEYDNPDLIAISVQAIHGSETVGCMRMLGYIQGKEVLILVDSGSTTS 528
Query: 161 FISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT 220
F+S+++ L V + G+ + QG F LDLG
Sbjct: 529 FLSSQIAQKLTGVTPLVAATRVKVANGTILNCVASVPNCDWMTQGWVFCTTFKVLDLGSY 588
Query: 221 DIIMGIHWLKTLGATHINWKTHSMKFNTR 249
D+I+G+ WL ++W ++ R
Sbjct: 589 DMILGMDWLMDHSPMQVDWIQKTLTITWR 617
>gi|90265240|emb|CAH67693.1| H0624F09.1 [Oryza sativa Indica Group]
gi|90399167|emb|CAJ86096.1| H0818H01.18 [Oryza sativa Indica Group]
Length = 1805
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + + V+
Sbjct: 641 LCFNC---FEPGHFADKCPKPRRQ---------QGQA-----------PPRSNNSGKDVL 677
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH+FIS V +L +
Sbjct: 678 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRN 737
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 738 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 787
>gi|108708503|gb|ABF96298.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1357
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 29/167 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 527 LCFNC---FEPGHFVDKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 563
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 564 RGRVNHVTAEDVLTTPDVIVGTFLIHSTPATILFDSGASHSFISVPFVGRNQLGVERLRN 623
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGI 226
+I G + V + +QG+ D + LD D+I+G+
Sbjct: 624 PLLITTPGGVMTTKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGM 670
>gi|18092337|gb|AAL59229.1|AF448416_9 gag-pol [Zea mays]
Length = 1470
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 20/173 (11%)
Query: 67 CYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEG-AKNQVVEVS 125
C+KC E + C ++ Q + +R ++ P G A+N+ +
Sbjct: 297 CFKCGELGHYANNCPRRN------------QQTPQKSNNQRNDQNTPARGSAQNKAPQNQ 344
Query: 126 ----LNSVVGLTSPKTLKLASE---INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTE 178
+N V + P+ + +N+ VL DSGASH+FI+ V +P +
Sbjct: 345 SRGRVNHVTAESVPEDADIVYGMFLVNSIPASVLFDSGASHSFITASFVEKHNIPKYPLK 404
Query: 179 PYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKT 231
I G KA C V + +QG++ D + L D+I+G +WLK+
Sbjct: 405 RILHISSPGGDMKATHSCPHVNIKIQGIDFTVDPVVLGSNGIDVILGCNWLKS 457
>gi|32487926|emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group]
Length = 1545
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 24/139 (17%)
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
L K +G + + V+L+ G SP + +L + +V++L DSG+SH+FI N +
Sbjct: 5 LHLKLIDGLRAFALPVALS---GTESPISFRLRGWVQGVEVLMLVDSGSSHSFIDNSLSQ 61
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
L+ GV Q + + V ++G +F L LG D+I+G+ W
Sbjct: 62 QLQ---------GV----------QQLPKSVS--VKGHVFQSEFKFLPLGTYDVILGMDW 100
Query: 229 LKTLGATHINWKTHSMKFN 247
L LG +++W F
Sbjct: 101 LMQLGPMNVDWTAKWRMFQ 119
>gi|284434488|gb|ADB85258.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1711
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 111 SKPTE--GAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
S PT+ G N V V+G+ L +N+ VL DSGASH+F+S + V
Sbjct: 622 STPTQSRGQVNHVTTEEAQDVIGV-----LMGTFSVNSVPAQVLFDSGASHSFVSRKFVE 676
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
LKLP + V+ G A + V + L+ + L L+ DII+ + W
Sbjct: 677 RLKLPTYKLKKPVVLSSPGRPLYATSVSPRVEIALEDSGFLATLLVLESQTLDIILRMDW 736
Query: 229 L 229
L
Sbjct: 737 L 737
>gi|54287531|gb|AAV31275.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54287635|gb|AAV31379.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1417
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA G K+ V+
Sbjct: 108 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPHSNNGGKD-VI 144
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DSGASH FIS V +L +
Sbjct: 145 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHWFISVPFVGRNQLGVERLRN 204
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 205 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 254
>gi|78708035|gb|ABB47010.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1796
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 23/167 (13%)
Query: 66 LCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVS 125
LC+ C E +C K Q + QA + G K+ V+
Sbjct: 632 LCFNCFEPRHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VIRGR 671
Query: 126 LNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
+N V LT+P + +++ +L DSGASH+FIS V +L + +
Sbjct: 672 VNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLL 731
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 732 ITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 778
>gi|108707255|gb|ABF95050.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1790
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 626 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 662
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + +++ +L DS ASH+FIS V +L +
Sbjct: 663 RGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSRASHSFISVPFVGRNQLGVERLRN 722
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 723 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 772
>gi|53981184|gb|AAV24824.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1661
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 105 QERELESKPTEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNF 161
Q+ + + G K+ V+ +N V LT+P + +++ +L DSGASH+F
Sbjct: 536 QQGQAPPRSNNGGKD-VIRGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSF 594
Query: 162 ISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITD 221
IS V +L + +I G A+ V + +QG+ D + LD D
Sbjct: 595 ISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLD 654
Query: 222 IIMGIHWL 229
+I+G++WL
Sbjct: 655 VILGMNWL 662
>gi|77554308|gb|ABA97104.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1412
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLC+ C E +S H+C +Q+ ++QE A A++D E +E A+ ++ +
Sbjct: 338 GLCFTCGECWSREHKC-GSSVQLHVVQELLA---ALQDDQLNHESVDTVSEPAEPVLMAI 393
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFI 162
S +V G S + +L + ++++L DSG+SH+FI
Sbjct: 394 SYQAVTGTESLTSFRLNGWVQGYELLMLVDSGSSHSFI 431
>gi|255555239|ref|XP_002518656.1| conserved hypothetical protein [Ricinus communis]
gi|223542037|gb|EEF43581.1| conserved hypothetical protein [Ricinus communis]
Length = 177
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/155 (18%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Query: 96 EAQAVEDVGQERELESKPTEG----AKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVV 151
E +++ E + ++ P + ++ + VS +++ S T+ + + N+ V+
Sbjct: 6 EEDDIQNATDEHQDDTLPQDHIIPEEDDEFINVSYHALGAHKSLNTVVVKGLVENQHVLN 65
Query: 152 LTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVED 211
L +SG++H+F+ N VV L + P+ V G+ + C + + +
Sbjct: 66 LLNSGSTHSFLHNRVVEKLNCNLVQATPFCVSTGGGNKLISNQKCLNFEWKMNNLSFSFN 125
Query: 212 FLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
F L++ D+++G W+++ + ++ + + F
Sbjct: 126 FRLLNIDEYDLVLGADWMRSFNHVYFDFCKNKLPF 160
>gi|38345526|emb|CAD41296.2| OSJNBa0020J04.1 [Oryza sativa Japonica Group]
Length = 1763
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q+ + +P K+ V+
Sbjct: 689 LCFNC---FEPGHFADKCPKPR-------------------RQQGQPPPRPNNDGKD-VI 725
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FIS V +L +
Sbjct: 726 WGRVNHVTAEDVLTTPNVIVGTFLIHSIPTTILFDSGASHSFISVPFVGRNQLGVERLRN 785
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 786 SLLITTPRGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 835
>gi|55168098|gb|AAV43966.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1684
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLV-------LKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ +VL DSGASH+FIS V L++P+ P+ I +A IC
Sbjct: 695 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPWRNI-------RATQIC 747
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V L ++ V+ + + LD DII+G+ WL
Sbjct: 748 PEVNLRIEEVDFLAKPIVLDSQSLDIILGMDWL 780
>gi|357498095|ref|XP_003619336.1| hypothetical protein MTR_6g046770 [Medicago truncatula]
gi|355494351|gb|AES75554.1| hypothetical protein MTR_6g046770 [Medicago truncatula]
Length = 246
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI--LRTGSATKAQGICRGVGL 201
INN +V + D+GA+H FI+ + V L L +++ V+ GS T + +C
Sbjct: 124 INNTPLVAIIDTGATHCFIAFDCVSTLGLDLSDMNGEMVVETPAKGSVTTSL-VCLRCPF 182
Query: 202 ILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNT 248
+ G + D + L L D+I+G++WL+ HIN + S+ F++
Sbjct: 183 SMFGRDFEMDLVCLPLSGMDVILGMNWLE-YNHVHINCFSKSVYFSS 228
>gi|77551437|gb|ABA94234.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1214
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGASH+FIS V N ++ G +A IC V L
Sbjct: 140 VNSIPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRT 199
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 200 EEVDFLAKPIVLDSQNLDIILGMDWL 225
>gi|38568037|emb|CAD40411.3| OSJNBa0065J03.7 [Oryza sativa Japonica Group]
Length = 1414
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
I K+++L DSG+SH+F+ +V ++ + +P V + +G L
Sbjct: 339 IQGTKLLMLIDSGSSHSFLDENIVQTMQGVTSLPQPVKVKVASGEVLICDKQLPDYAWWL 398
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
QG +F L L D I+GI WL+ LG I W
Sbjct: 399 QGRCYRTNFKLLSLPGYDAILGIDWLQGLGVMRIIW 434
>gi|284434698|gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 9/187 (4%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQA-VE------DVGQERELESKPTEGA 117
G+C C +K+ GHRC++ + +++ E E A VE D + E+ P E
Sbjct: 160 GICRYCGDKWFLGHRCKQYQQVNLMVSETEETAHPNVETEDDPPDTNECTVEETDPPEQL 219
Query: 118 KNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNT 177
+ ++VS +V G + T + +I ++ + L DSG++H F+ I
Sbjct: 220 MH--MQVSSQAVQGYSRFTTYTVEVKIGGRRGIALLDSGSTHTFMDLRFATKTTCRIMCN 277
Query: 178 EPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHI 237
V + G + V + G F L L D+++G W+ +I
Sbjct: 278 NLMKVTVAGGGSILTGSHVPEVKYSINGQVFCNSFKILKLKNYDMVLGCDWMYQHSPINI 337
Query: 238 NWKTHSM 244
+ KT +
Sbjct: 338 DLKTRRL 344
>gi|58531955|emb|CAE03064.2| OSJNBa0089E12.2 [Oryza sativa Japonica Group]
Length = 1764
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 107 RELESKPTEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFIS 163
R + G K+ V+ +N V LT+P + +++ +L DSGASH+FIS
Sbjct: 622 RPRPPRSNNGGKD-VIRGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFIS 680
Query: 164 NEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
V +L + +I G A+ V + +QG+ D + LD D+I
Sbjct: 681 VPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVI 740
Query: 224 MGIHWL 229
+G++WL
Sbjct: 741 LGMNWL 746
>gi|77554807|gb|ABA97603.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1753
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 589 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 625
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L +SGASH+FIS V +L +
Sbjct: 626 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFNSGASHSFISVPFVGRNQLGVERLRN 685
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD ++I+G++WL
Sbjct: 686 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLNVILGMNWL 735
>gi|38345756|emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa Japonica Group]
Length = 1851
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 110 ESKPTEGAKNQVVEVSLN---SVVGLTSPKTLKLASEI-------NNKKVVVLTDSGASH 159
+S+P+ A Q VS N V +T + A+++ N+ +VL DSGASH
Sbjct: 712 QSRPSSQASGQGSHVSNNFGRGRVNHIQAETAQDATDVVMGMFSVNSVPAIVLFDSGASH 771
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGI 219
+ IS V N +I G +A IC V L ++ V + + LD
Sbjct: 772 SIISQAFVKRNGWKTQNLRVPMIIHSPGRNIRATQICPEVNLRIEEVNFLAKPIVLDSQS 831
Query: 220 TDIIMGIHWL 229
DII+G+ WL
Sbjct: 832 LDIILGMDWL 841
>gi|146749389|gb|ABQ44355.1| polyprotein [Zea mays]
Length = 1476
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 104 GQERELESKPTEGAKNQVVEV---SLNSVVGLTSPKTLKLAS---EINNKKVVVLTDSGA 157
Q+R++ + + + Q V+V LN P+ + + + N+ ++L DSGA
Sbjct: 328 NQQRQMPAPNQDKGRKQKVQVRQGKLNFTALEEVPEGAPIMTGTFSVYNQPALILFDSGA 387
Query: 158 SHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDL 217
SH+FIS + KLP ++++ +I+ G + + V + L + L L L
Sbjct: 388 SHSFISQKFSANCKLPFSHSKGSFMIVTPGGKIATNQLNQSVPIQLGSHIVKTTLLVLGL 447
Query: 218 GITDIIMGIHWL 229
DII+G +W+
Sbjct: 448 ENVDIILGANWM 459
>gi|108706119|gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1776
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL D GASH+FIS V N ++ G +A IC V L +
Sbjct: 681 VNSVPAIVLFDLGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 740
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 741 EEVDFLAKPIVLDSQSLDIILGMDWL 766
>gi|50300513|gb|AAT73656.1| unknown protein, similar to polyprotein [Oryza sativa Japonica
Group]
Length = 917
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA G K+ V+
Sbjct: 570 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPHSNNGGKD-VI 606
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FI V +L +
Sbjct: 607 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFIYVPFVGRNQLGVERLRN 666
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 667 PLLITTPGGVMTAKYYSPVVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 716
>gi|449460756|ref|XP_004148111.1| PREDICTED: uncharacterized protein LOC101204313 [Cucumis sativus]
Length = 501
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 26/30 (86%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRC 80
++L++AE ++ + GLC+KC+E++SPGHRC
Sbjct: 297 KRLSDAEFRARLDKGLCFKCNERYSPGHRC 326
>gi|77553383|gb|ABA96179.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 770
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 152 LTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICR----GVGLILQGVE 207
+T+SG++++FI +V + + E + L+ A Q IC G +QG
Sbjct: 173 VTESGSTNSFIDEQV----GMKMIGVEEFQHSLKVQIADGGQLICSKILPGCNWCMQGHS 228
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTI 252
DF + LG DII+G+ WL+ I+W ++F +N +
Sbjct: 229 FKNDFKLIPLGSYDIILGMDWLQQHSPMQIDWIQKWVEFQYQNQL 273
>gi|357450709|ref|XP_003595631.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355484679|gb|AES65882.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 338
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI--LRTGSATKAQGICRGVGL 201
INN +V + D+ A+H + V L L +++ V+ GS T + +C L
Sbjct: 104 INNTPLVAIIDTSATHCIFAFHCVSALGLDVSDMNGEMVVDTPAKGSVTTSL-VCSRCPL 162
Query: 202 ILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQFF 258
+ G + V D + L L D+I+G++WL+ HIN + S+ F++ +F
Sbjct: 163 SMDGRDFVMDLVCLPLSGMDVILGMNWLE-YNHVHINCFSKSVYFSSAEEESDAEFL 218
>gi|336369588|gb|EGN97929.1| hypothetical protein SERLA73DRAFT_55870 [Serpula lacrymans var.
lacrymans S7.3]
Length = 231
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 25/196 (12%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCR---KQELQVVLLQEYEAEAQAV--EDVGQ 105
R+LT+ E +S ++ G C+ C+EK G CR K + V E E + + V ED Q
Sbjct: 44 RRLTKDEEESRRKEGRCFICNEKGHIGRNCRNKGKTPKRKVRQTETEDDTKTVVEEDRVQ 103
Query: 106 E-----REL-ESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKV--VVLTDSGA 157
REL E + TE K E ++N+ +L++ + K + L DSGA
Sbjct: 104 NIMRMWRELGEDQRTEAMKESEDEATINA-------NSLRIDCSLKQKTIGTKALIDSGA 156
Query: 158 SHNFISNEVVLVLKLPITNTEPYGV----ILRTGSATKAQGICRGVGLILQGVEIVEDFL 213
+ +F+ + + +LP+ P + + RT + C + G FL
Sbjct: 157 TDDFMDTKFAIRHRLPLQKL-PTPITCKNVDRTTNKNGKITHCTYQRIDAGGQNRFTKFL 215
Query: 214 PLDLGITDIIMGIHWL 229
L D+++G WL
Sbjct: 216 LTGLDGEDVLLGFPWL 231
>gi|77551042|gb|ABA93839.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 852
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 121 VVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPY 180
++ +S++++ G+ S T +L +I + V++L DSG+S +F+S L+ P
Sbjct: 314 LLALSIHAIQGIVSSSTKRLHGKIQGRDVLILVDSGSSTSFLSVAFADQLEGVQPLRRPL 373
Query: 181 GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
V + G + QG F + +G D I+G+ WL I+W+
Sbjct: 374 SVKVANGEMLRCLTELPNTVWSAQGFGFCTTFKVITMGGYDAILGMDWLTQHSPMDIDWQ 433
Query: 241 THSMKFNTRNTIGKNQ 256
+++ T+G +Q
Sbjct: 434 AKTIRL----TLGTHQ 445
>gi|21740440|emb|CAD41625.1| OSJNBa0091D06.10 [Oryza sativa Japonica Group]
Length = 1831
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ +VL DSGAS++FIS V N ++ G +A +C V L +
Sbjct: 758 VNSVPAIVLFDSGASYSFISQAFVKRNGWKTQNLRLPMIVHSPGRNIRATQVCPEVNLRI 817
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V+ + + LD DII+G+ WL
Sbjct: 818 EEVDFLAKPIVLDSQSLDIILGMDWL 843
>gi|334183277|ref|NP_001185213.1| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
gi|332194864|gb|AEE32985.1| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
Length = 154
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 187 GSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT--DIIMGIHWLKTLGATHI 237
G +++G C G+ L +Q IVED+L LDL T D+I+G WL LG T I
Sbjct: 4 GQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETMI 56
>gi|54287623|gb|AAV31367.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1611
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA G K+ V+
Sbjct: 570 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPHSNNGGKD-VI 606
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH+FI V +L +
Sbjct: 607 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFIYVPFVGRNQLGVERLRN 666
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 667 PLLITTPGGVMTAKYYSPVVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 716
>gi|356503071|ref|XP_003520335.1| PREDICTED: uncharacterized protein LOC100785238 [Glycine max]
Length = 498
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 93 YEAEAQAVEDVGQERELESKPTE--GAKNQ--VVEVSLNSVVGLTSPKTLKLASEINNKK 148
Y+ A+ + QE +++ +E NQ + ++SL+++ G + TL++ +N +
Sbjct: 141 YDDPHDALLKLSQEDSIDAYLSEFQALANQPSLAQLSLHALSGHPASATLRITGTVNGHE 200
Query: 149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATK 191
VV+L D G++HNF+ + +V L L +T ++ GS +
Sbjct: 201 VVILVDGGSTHNFVQDRMVRFLNLAAQSTPRLTFMVGNGSEIR 243
>gi|91805353|gb|ABE65406.1| hypothetical protein At1g53705 [Arabidopsis thaliana]
Length = 84
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 187 GSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT--DIIMGIHWLKTLGATHI-NWKT 241
G +++G C G+ L +Q IVED+L LDL T D+I+G WL LG T I N KT
Sbjct: 4 GQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETMIENTKT 61
>gi|116830377|gb|ABK28146.1| unknown [Arabidopsis thaliana]
Length = 85
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 187 GSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT--DIIMGIHWLKTLGATHI-NWKT 241
G +++G C G+ L +Q IVED+L LDL T D+I+G WL LG T I N KT
Sbjct: 4 GQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETMIENTKT 61
>gi|38346484|emb|CAE03723.2| OSJNBa0021F22.17 [Oryza sativa Japonica Group]
Length = 1083
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 132 LTSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEV-VLVLKLPITNTEPYGVIL 184
LT+P + I++ +L DSGASH+FIS N++ V L+ P+ T P GV++
Sbjct: 552 LTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMI 611
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
A+ V +QG+ D + LD D+++G++WL
Sbjct: 612 -------AKYYSPAVPTEIQGIPFPSDLILLDTKNLDVVLGMNWL 649
>gi|357436173|ref|XP_003588362.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355477410|gb|AES58613.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 424
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRT---GSATKAQGICRGVG 200
IN+ ++ + D+GA+H+FIS V L L +T G+++ T GS T + +C
Sbjct: 200 INSTPLIAIIDTGATHSFISASCVERLDLVVTPLL-RGMVIDTPASGSVTTSF-MCAKCP 257
Query: 201 LILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+ V+ D + L L D+I G+ WL G + IN T S+ F+
Sbjct: 258 VNFGDVDFELDLVCLPLKHMDVIFGMDWLLAFGVS-INCLTRSVTFS 303
>gi|121501699|gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
Length = 1501
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN+ V L DSGA+++FIS V+ L L + V + TG K + + + L +
Sbjct: 368 INSVFVKTLFDSGATYSFISPSVLKSLGLVEHESIDLSVSIPTGEVVKCTKLFKNLPLKI 427
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWLKTLGA------THINWKTHSMKFNTRNTIGKNQF 257
G + + +LG D+I+G++WL A + + S KF + GK +
Sbjct: 428 GGSVFPSELIEFNLGDLDVILGMNWLSLYKARIDCEVQKVVLRNPSGKFTSYRRFGKPKN 487
Query: 258 F 258
F
Sbjct: 488 F 488
>gi|62734395|gb|AAX96504.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550471|gb|ABA93268.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1506
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+++ + VL DSGA+H+F+S L L I GS + +C+GV LI+
Sbjct: 411 VHSIPLTVLFDSGATHSFMSTLKAKQLDLKTEFLSDAMRIQSPGSTMVTKLLCKGVELII 470
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
GV+ + + LD ++I+G+ WL
Sbjct: 471 DGVKFKANLILLDTLGLNVILGMDWL 496
>gi|38347553|emb|CAD39388.2| OSJNBb0016B03.9 [Oryza sativa Japonica Group]
Length = 1092
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGV 199
+A+ I++ +L DSGASH+FIS V +L + +I G A+ V
Sbjct: 57 VATLIHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAV 116
Query: 200 GLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+ +QG+ D + LD D+I+G++WL
Sbjct: 117 PIEIQGIPFPSDLILLDTKNLDVILGMNWL 146
>gi|38344156|emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 7/174 (4%)
Query: 78 HRCRKQE-LQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKN------QVVEVSLNSVV 130
H+CR + + ++ E E E + QE E ++ P AK Q++++S +++
Sbjct: 423 HKCRTGKVIHMMEEVEDEEEESGSPEENQEGEYQTAPGSPAKKEDDNEEQLMQISTHAIQ 482
Query: 131 GLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSAT 190
G T L + + +KVV L DSG+++ F++ E L I + V++ G
Sbjct: 483 GTYGINTFSLITYVKGRKVVALVDSGSTNTFMNYEFALRSGCEIIEFDHNRVMVAGGGIL 542
Query: 191 KAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
+ + +QG + F + L DI++G W+ +++ K ++
Sbjct: 543 NSTAKTEVIQYKVQGYLFGKAFQLIPLKGYDIVLGADWIYEHSPINLDLKQRTL 596
>gi|34015354|gb|AAQ56543.1| putative gag-protein [Oryza sativa Japonica Group]
Length = 835
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 70 CDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSL 126
C F PGH +C K Q + QA L + + +++V V+
Sbjct: 591 CFNSFEPGHFADKCPKPRCQ---------QGQAPP------RLNNGGKDVTRSRVNHVTA 635
Query: 127 NSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRT 186
V LT+P + I++ +L DSGASH+FI V +L + +I
Sbjct: 636 EDV--LTTPDIIVGTFLIHSIPATILFDSGASHSFIYVPFVGRNQLGVERIRNPLLITTP 693
Query: 187 GSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
G A+ V + +QG+ D + LD D+I+G++WL
Sbjct: 694 GGVMTAKYYSPTVPIEIQGIPFPSDLILLDTKNLDVILGMNWL 736
>gi|374081772|dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTE-PYGVILRTGSATKAQGICRGVGLI 202
I+N V L D+GAS F+S+++ L LP+ E P + G TK + V +
Sbjct: 18 IDNLAVSALFDTGASGTFVSSKIARKLNLPLQELEKPLSITTPLGRVTKVAQVLPQVDVR 77
Query: 203 LQGVEIVEDFLPLDLGITDIIMGIHWL 229
+ D LD D+I+G+ WL
Sbjct: 78 VGAYRCKSDLTVLDFTNFDVILGMDWL 104
>gi|358347725|ref|XP_003637905.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355503840|gb|AES85043.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 358
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRT---GSATKAQGICRGVG 200
IN+ ++ + D+GA+H+FIS V L L +T G+++ T GS T + +C
Sbjct: 138 INSTPLIAIIDTGATHSFISASCVERLDLVVTPLL-RGMVIDTPASGSVTTSF-MCAKCP 195
Query: 201 LILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+ V+ D + L L D+I G+ WL G + IN T S+ F+
Sbjct: 196 VNFGDVDFELDLVCLPLKHMDVIFGMDWLLAFGVS-INCLTRSVTFS 241
>gi|240254260|ref|NP_683428.4| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
gi|332194863|gb|AEE32984.1| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
Length = 131
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 187 GSATKAQGICRGVGLILQGVEIVEDFLPLDLGIT--DIIMGIHWLKTLGATHI 237
G +++G C G+ L +Q IVED+L LDL T D+I+G WL LG T I
Sbjct: 4 GQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETMI 56
>gi|222636869|gb|EEE67001.1| hypothetical protein OsJ_23913 [Oryza sativa Japonica Group]
Length = 877
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 179 PYGVILR-------TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKT 231
PY +IL G + G+CR + L + G D LDL DII+G+ WL+T
Sbjct: 657 PYAIILSGLRFVMANGDRLVSPGLCRNLALNIDGEAFSVDCFALDLCAVDIILGMQWLQT 716
Query: 232 LGATHINWKTHSMKF 246
LG I W +M+
Sbjct: 717 LGP--ILWDFKNMRM 729
>gi|77554522|gb|ABA97318.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1398
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
I++ +L DSGASH+FIS V +L + +I G A+ V + +
Sbjct: 319 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 378
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
QG+ D + LD D+I+G++WL
Sbjct: 379 QGIPFPSDLILLDTKNLDVILGMNWL 404
>gi|222628386|gb|EEE60518.1| hypothetical protein OsJ_13847 [Oryza sativa Japonica Group]
Length = 218
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 47 GRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQE 106
G R+LT +E+ + LC CDE +S GH + + + L + + ++
Sbjct: 88 GCTVRRLTPSEIDERRRKVLCINCDETYSRGH---NKVCKCLFLLDLAYDDDEEDEGDT- 143
Query: 107 RELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
T A + + + L++V + + L+ + + + L D G++HNF+S E
Sbjct: 144 -------TPAADPETLRIFLHAVTCVRPSNAMHLSIRLGDATLHALVDMGSTHNFLSQES 196
Query: 167 VLVLKLPI 174
++LP+
Sbjct: 197 AARVRLPL 204
>gi|19551090|gb|AAL91595.1|AC099400_1 Putative polyprotein [Oryza sativa Japonica Group]
gi|110288515|gb|ABG65884.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 893
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTE---GAKNQ- 120
GLCY C EK+SP H+ +Q+ +QE + +G E + + TE G+ +Q
Sbjct: 772 GLCYICAEKWSPTHK-YANTVQLHAVQEL------LTTLGSEILYDQEFTEECEGSDSQG 824
Query: 121 VVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKL 172
++ +S+ S+ G + ++L I ++V++L DSG++ F+S++V + +
Sbjct: 825 LMAISVQSMHGSETMGCMRLLGFIQGREVLILVDSGSTAGFLSSQVAQTISM 876
>gi|18542904|gb|AAL75746.1|AC091724_19 Putative polyprotein [Oryza sativa Japonica Group]
gi|31430267|gb|AAP52207.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1322
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 110 ESKPTEGAKNQVVEVSLN----------SVVGLTSPKTLKLASEINNKKVVVLTDSGASH 159
+S+P+ A Q S N + +P + +N+ +VL DSGASH
Sbjct: 311 QSRPSSQASGQGSRASNNFGRGRVNHIQAETAQDAPDVVMGMFSVNSVPAIVLFDSGASH 370
Query: 160 NFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGI 219
+FIS V N ++ G +A I V L ++ V+ + + LD
Sbjct: 371 SFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQIYPEVNLRIEEVDFLAKPIVLDSQS 430
Query: 220 TDIIMGIHWL 229
DII+G+ WL
Sbjct: 431 LDIILGMDWL 440
>gi|357448513|ref|XP_003594532.1| Zinc finger protein GIS2 [Medicago truncatula]
gi|355483580|gb|AES64783.1| Zinc finger protein GIS2 [Medicago truncatula]
Length = 499
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI--LRTGSATKAQGICRGVGL 201
INN +V + D+GA+H FI+ + L L +++ V+ GS T + +C L
Sbjct: 355 INNTLLVAIIDTGATHCFIAFDCASTLGLVMSDMNGEMVVETPAKGSVTTSL-VCLKCPL 413
Query: 202 ILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNT 248
+ G + D + L L D+I+G++WL+ HIN + S+ F++
Sbjct: 414 SMFGRDFEMDLVCLPLSGMDVILGMNWLE-YNHVHINCFSKSVYFSS 459
>gi|38567683|emb|CAE75973.1| B1160F02.4 [Oryza sativa Japonica Group]
Length = 1618
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 638 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 674
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DS ASH+FIS V +L +
Sbjct: 675 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSRASHSFISVPFVGRNQLGVERLRN 734
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +Q + D + LD D+I+G++WL
Sbjct: 735 PLLITTPGGVMTAKYYSPAVPIEIQRIPFPSDLILLDTKNLDVILGMNWL 784
>gi|449492766|ref|XP_004159094.1| PREDICTED: uncharacterized protein LOC101231524 [Cucumis sativus]
Length = 993
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 63/185 (34%)
Query: 75 SPGHRCR---KQELQVVLLQEYEAEAQAVE--DVGQERELESKPTEGAKNQVVEVSLNSV 129
S GHRC+ ++EL+V+++Q E + VE D +E E+++ + K +E+SLNSV
Sbjct: 303 SGGHRCKVKDQKELRVLVVQANGVELEVVEEDDYTEEPEVKAIELDIKKEPGIELSLNSV 362
Query: 130 VGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSA 189
VGLT+P + L + G H +GV
Sbjct: 363 VGLTNPVEIALGGN--------FSLWGQGH--------------------FGV------- 387
Query: 190 TKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF--N 247
C +G GV+I+ +G+ WL TLG T ++W+ ++ F N
Sbjct: 388 ---GYCCERLG----GVDII--------------LGMQWLHTLGVTEVDWRKLTLTFIQN 426
Query: 248 TRNTI 252
+N +
Sbjct: 427 EKNVV 431
>gi|222618930|gb|EEE55062.1| hypothetical protein OsJ_02776 [Oryza sativa Japonica Group]
Length = 692
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
++L+ AE+ + GLCY CDEK+ GHRC+K + V+ ED G E +
Sbjct: 433 KRLSPAEMAQRRSEGLCYNCDEKYVAGHRCKKSFVIEVI--------SFPEDTGDEE--D 482
Query: 111 SKPTEGAKN-QVVEVSLNSVVGLTSPK 136
S P A + L+++ G+++PK
Sbjct: 483 STPEAHAITLDEPSIFLHALAGISAPK 509
>gi|9294235|dbj|BAB02137.1| unnamed protein product [Arabidopsis thaliana]
Length = 529
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 128 SVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTG 187
S GL K LK I+ V V DSGA++NF+ ++ + KLP T V+L G
Sbjct: 296 STCGLMKNKELKFFGSISGHHVSVRIDSGATNNFMPKDLAIHFKLPGKETNLVSVLLGHG 355
Query: 188 SATKAQGICRGVG 200
K++ C G+G
Sbjct: 356 LHIKSKEKCMGIG 368
>gi|357470935|ref|XP_003605752.1| Pol polyprotein [Medicago truncatula]
gi|355506807|gb|AES87949.1| Pol polyprotein [Medicago truncatula]
Length = 745
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI--LRTGSATKAQGICRGVGL 201
INN +V + D+GA+H FI+ + V L L +++ V+ GS T + +C L
Sbjct: 343 INNTPLVAIIDTGATHCFIAFDCVSALGLDLSDMNGEMVVETPAKGSVTTSL-VCLKCPL 401
Query: 202 ILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNT 248
+ G + D + L L D+I+G++WL+ IN + S+ F++
Sbjct: 402 SMFGRDFEMDLVCLPLSGMDVILGMNWLE-YNHVLINCFSKSVHFSS 447
>gi|357450377|ref|XP_003595465.1| hypothetical protein MTR_2g048010 [Medicago truncatula]
gi|355484513|gb|AES65716.1| hypothetical protein MTR_2g048010 [Medicago truncatula]
Length = 468
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 66 LCYKCDEKFSPGHRCRKQELQVVLLQEYE---AEAQAVEDVGQERELESKPTEGAKNQVV 122
+CYKC EK + C + + + + AE + + + S+ E K ++
Sbjct: 125 VCYKCGEKGHKSNVCGRDDRKCFRCGQKGHSLAECKRGDIICYNCNGSSQCPEPKKTRIG 184
Query: 123 EVSLNSVVGLTSPKTLKL---ASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+ ++ G +P +L N+ ++ + D+GA+H FI+ E L L +++ +
Sbjct: 185 G-KVFALTGTQTPNEDRLIRGTCFFNSTPLIAIIDTGATHCFIAIECAYKLGLDVSDMKG 243
Query: 180 YGVI--LRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHI 237
V+ GS T + +C + + G + V D + L L D+I G++WL+ HI
Sbjct: 244 EMVVETPAKGSVTTSL-VCLRCPISMFGRDFVIDLVCLPLTGMDVIFGMNWLE-YNRVHI 301
Query: 238 NWKTHSMKFNTRNTIGK 254
N + ++ F++ G+
Sbjct: 302 NCFSKTVHFSSAEEEGE 318
>gi|238576437|ref|XP_002388035.1| hypothetical protein MPER_12999 [Moniliophthora perniciosa FA553]
gi|215448987|gb|EEB88965.1| hypothetical protein MPER_12999 [Moniliophthora perniciosa FA553]
Length = 830
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 85/212 (40%), Gaps = 24/212 (11%)
Query: 52 KLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELES 111
+L+E+E Q + GLC+ C + GHR RK+ + A + E ELE
Sbjct: 275 RLSESERQDYMKKGLCFYCSKT---GHRERKKPSAAETFAKIRA-------LTGEMELEE 324
Query: 112 KPTE-GAKNQVVEVSLNSVVGLTSPKTLKLASEINNK--KVVVLTDSGASHNFISNEVVL 168
K G Q + NS+ L L +I NK ++ L DSGA FIS +
Sbjct: 325 KDKMLGLIEQSATLERNSI-------HLSLMYKIGNKNAEIKALIDSGAGGRFISLDFAK 377
Query: 169 VL-KLPITNTEPYGVILRTGSATKAQGICRGVGLILQG--VEIVEDFLPLDLGITDIIMG 225
L K +P V G+ K I V E+F+ LG +I+G
Sbjct: 378 TLGKRWNKLRKPIKVYNVDGTPNKTAMITHSVLFEYSSGTKTFCEEFMISGLGKEKLILG 437
Query: 226 IHWLKTLGATHINWKTHSMKFNTRNTIGKNQF 257
+ WL+ +I+W T + F + QF
Sbjct: 438 LPWLQNHNP-NIDWVTGEVVFRPNRKLRIRQF 468
>gi|358349311|ref|XP_003638682.1| Microtubule organization protein [Medicago truncatula]
gi|355504617|gb|AES85820.1| Microtubule organization protein [Medicago truncatula]
Length = 227
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 43 PAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQEL 85
PA E R F ++++AEL +E GLC+ CDE+FS GH C + +L
Sbjct: 128 PATEPR-FWQISKAELTERREKGLCFNCDERFSQGHHCIQTQL 169
>gi|449692368|ref|XP_004213007.1| PREDICTED: uncharacterized protein LOC101239870 [Hydra
magnipapillata]
Length = 593
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 129 VVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGS 188
+ + SP L + IN L D+G+ FI++E++ LP N V L S
Sbjct: 236 IAAINSPDRL-INVTINKNITQALIDTGSDKTFITSELLQHWNLPYDNQSTSKVSLADNS 294
Query: 189 ATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
K +GI +G L+L G ++ FL +D + +I+G+ L + IN+K
Sbjct: 295 TLKVKGIFQG-SLLLAGEKLKVQFLVVDNLVAPVIIGMDVLTQHTSITINFK 345
>gi|357459751|ref|XP_003600156.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355489204|gb|AES70407.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 651
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 42 YPAHEGRGFRKLTEAELQSNQECG---LCYKCDEKFSPGHRCRKQELQVV-------LLQ 91
Y A +G ++L + + ++ +C+KC EK + C K E + +L
Sbjct: 320 YSAPADKGKQRLNDERRPNRRDAPAEIVCFKCGEKGHKSNVCTKDEKKCFRCGQKGHVLA 379
Query: 92 EYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKT------LKLASEIN 145
+ + + +E + ++ T+ K + + V LT +T ++ N
Sbjct: 380 DCKRGDVVCYNCNEEGHISTQCTQPKKVR----TGGKVFALTGTQTTNEDRLIRGTCFFN 435
Query: 146 NKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI--LRTGSATKAQGICRGVGLIL 203
+ ++ + D+GA+H FI+ E L L +++ + V+ GS T + +C + +
Sbjct: 436 STPLIAIIDTGATHCFIALESAYKLGLIVSDMKEEMVVETPAKGSVTTSL-VCLRCPISM 494
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQFF 258
G + D + L L D+I G++WL+ HIN + ++ F++ G +F
Sbjct: 495 FGRDFEVDLVCLPLTGMDVIFGMNWLE-YNRVHINCFSKTVHFSSAEEEGGVEFL 548
>gi|242276206|gb|ACS91357.1| polyprotein [Coix lacryma-jobi]
Length = 966
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 141 ASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVG 200
A + N+ V L DSGA+H+FI+ E V +PI ++ IL G A I V
Sbjct: 239 AFPVANQLAVTLFDSGATHSFINREFVRKHAIPICESKGKISILSPGGRLFANEIVHQVP 298
Query: 201 LILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGA 234
+ + + L+ D+I+G++W++ GA
Sbjct: 299 IEMGRHVYPTSMIVLNHQTLDVILGMNWMQRYGA 332
>gi|55733883|gb|AAV59390.1| hypothetical protein [Oryza sativa Japonica Group]
gi|57900672|gb|AAW57797.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1253
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNT 177
S N+ ++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+
Sbjct: 263 SHNNKEAQSAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGFSLVKLKIPMRVH 322
Query: 178 EPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
P G + T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 323 TPRGGMTTT-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 367
>gi|10946132|gb|AAG24792.1|AF264028_2 pol protein [Colletotrichum gloeosporioides]
Length = 1241
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 105 QERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISN 164
Q + L+S PTE Q + + L L+L INN+ + L DSG+ +F+S
Sbjct: 59 QSKNLDS-PTEDGPRQARKTRSICLATLDQKLHLQLRVIINNQTAIALIDSGSEGDFVSP 117
Query: 165 EVVLVLKLPI-TNTEPYGVILRTGSATKAQG--ICRGVGLILQGVEIVEDFLPLD---LG 218
V L++P +PY + G + +G I + + L LD +G
Sbjct: 118 RAVNKLRIPWHEKRQPYQLNNVEGEQVQYEGGTIKNETAPLEMSYLDRNEQLQLDITNIG 177
Query: 219 ITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTI 252
D+++G+ WL+ I+W+T + ++ N +
Sbjct: 178 EYDLVLGMPWLEK-NNPRIDWRTGQLHWDNDNLV 210
>gi|108862284|gb|ABA96071.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|215767385|dbj|BAG99613.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 20/139 (14%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
+ L+ E+ + GLCY C EK+ G C K + V+ + E E
Sbjct: 86 KHLSPVEMAQRRTEGLCYNCHEKYVSGQHCEKSFIIEVI------------SFPDDTEGE 133
Query: 111 SKPTEGAKNQVVE-----VSLNSVVGLTSP--KTLKLASEINNKKVVVLTDSGASHNFIS 163
P A + + +SL+++ G+ + T+K+ + + + L DSG+ HNF+S
Sbjct: 134 DDPPPAANTILADAGKLLISLHALAGIRALMFNTIKVCACVGTVDYLALLDSGSMHNFLS 193
Query: 164 NEVVLVLKLPITNTEPYGV 182
E V +++ ++ P V
Sbjct: 194 -ETVAHVRISSSSRAPASV 211
>gi|21672017|gb|AAM74379.1|AC116603_15 Putative retroelement [Oryza sativa Japonica Group]
Length = 987
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 117 AKNQVVEVSLNSVV---GLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLP 173
A ++V+ LN ++P+ + A +N+ +L DSGA+H+FIS +L
Sbjct: 243 AGPKLVQARLNHASTEEARSAPEVILGAYPVNSIPATILFDSGATHSFISKRFAGAHRLY 302
Query: 174 ITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+ + + G C V + +QG+ + + L+ DII+G+ WL
Sbjct: 303 LVKLKIPMRVHTPGGGMTTTHYCPSVTVEIQGLIFPANLILLESKDLDIILGMDWL 358
>gi|156055170|ref|XP_001593509.1| hypothetical protein SS1G_04936 [Sclerotinia sclerotiorum 1980]
gi|154702721|gb|EDO02460.1| hypothetical protein SS1G_04936 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 748
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 142 SEINNKKVVVLTDSGASHNFISNEVVLVLKLPI-TNTEPYGVILRTGSATKAQGI----C 196
++IN + + + DSGA+ NFI+ + L + + T PY + L G G
Sbjct: 293 AKINGRVIRAMIDSGATGNFIAPKTAKYLGVQLQTKQTPYQLQLVDGQLAGLDGKISQET 352
Query: 197 RGVGLIL-QGVEIVE-DFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRN 250
R V +I+ Q EI++ D +PL G II+GI WLK I+W ++ F+ ++
Sbjct: 353 RSVQMIIDQHKEIIQFDVVPL--GNQSIILGIPWLKAHNP-QIDWLWETVTFSNKS 405
>gi|147792776|emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]
Length = 1797
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 151 VLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRT--GSATKAQGICRGVGLILQGVEI 208
VL D G++H+F+S +L LP+ + + + +I+ T G + A + R +++ E+
Sbjct: 803 VLIDLGSTHSFVSVSFAGLLGLPVASMD-FDLIVATPVGDSVVASRMLRNCIVMIGYREM 861
Query: 209 VEDFLPLDLGITDIIMGIHWLKTLGAT 235
D + LDL D+I+G+ WL + A+
Sbjct: 862 PIDLVLLDLQDFDVILGMDWLASYHAS 888
>gi|347831117|emb|CCD46814.1| hypothetical protein [Botryotinia fuckeliana]
Length = 309
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 143 EINNKKVVVLTDSGASHNFISNEVVLVLKLPI-TNTEPYGVILRTGSATKAQGICRGVGL 201
+IN + DSGA+ NFI+ E L++P+ T PY + L G + G +
Sbjct: 106 QINGHIQSAMIDSGATGNFIAPEAAKYLEIPLQTKQHPYRLQLVDGQLAGSDGKISQETI 165
Query: 202 -----ILQGVEIVE-DFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
I Q E+++ D +P LG II+G+ WLK I+W + F+
Sbjct: 166 PVRMGITQHTEVIQLDVVP--LGQQQIILGMPWLKAHNPK-IDWAQGIVTFD 214
>gi|326674161|ref|XP_003200083.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1377
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 113 PTEGAKNQVVEVSLN--SVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
P+ G + + E+SL+ S P T+ S N +V DSGA NFI +
Sbjct: 321 PSVGKRLLMGEISLDKSSAAATLLPVTITWGSGSQNTHALV--DSGAEGNFIDSSFAFSF 378
Query: 171 KLP-ITNTEPYGVILRTG-SATKAQGICRGVGLILQG--VEIVEDFLPLDLGITDIIMGI 226
KLP I +P V +G S + + LI G VE + FL D T +++G
Sbjct: 379 KLPVIALAQPIAVRALSGLSLPTITHSTKPIKLITSGNHVENISFFL-TDCSNTPVVLGH 437
Query: 227 HWLKTLGATHINW 239
WL L HINW
Sbjct: 438 PWL-ILHKPHINW 449
>gi|347839935|emb|CCD54507.1| hypothetical protein [Botryotinia fuckeliana]
Length = 680
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 143 EINNKKVVVLTDSGASHNFISNEVVLVLKLPI-TNTEPYGVILRTGSATKAQG-ICRGVG 200
+IN + DSGA+ NFI+ E L++P+ T PY + L G + G I +
Sbjct: 431 QINGHIQSAMIDSGATGNFIAPEAAKYLEIPLQTKQHPYRLQLVDGQLAGSDGKISQETI 490
Query: 201 LILQGVEIVEDFLPLD---LGITDIIMGIHWLKTLGATHINW 239
I G+ + + LD LG II+G+ WLK I+W
Sbjct: 491 PIRMGITQHTEVIQLDVVPLGQQQIILGMPWLKAHNPK-IDW 531
>gi|226507669|ref|NP_001140639.1| uncharacterized protein LOC100272714 [Zea mays]
gi|194700296|gb|ACF84232.1| unknown [Zea mays]
Length = 459
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Query: 117 AKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLT-DSGASHNFISNEVVLVLKLPIT 175
+++ V ++ G T +K+ + NK ++L+ SG+ FI+ +V +L
Sbjct: 299 SRSSSTAVKAKAISGTTGKGCMKVRGLLKNKVTLLLSIHSGSPTCFINKNLVARARLSAV 358
Query: 176 NTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGAT 235
+ P L G + + + + G D LDLG D I+G WLK+
Sbjct: 359 SCPPARFTLANGESLTSDLLVPQLAWCANGHTFHTDMRVLDLGPYDAILGYDWLKSHSPM 418
Query: 236 HINWKTHSMKFN 247
+W + F+
Sbjct: 419 ECDWANKVLVFH 430
>gi|147798060|emb|CAN62942.1| hypothetical protein VITISV_034196 [Vitis vinifera]
Length = 945
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILR-TGSATKAQGICRGVGLILQGVE 207
V VL D+GA+H+FIS L L + E +I G+ ++ IC+G + L
Sbjct: 167 VRVLFDTGATHSFISASCANTLGLKMEMVENLLLIXSPMGTNSRXDRICKGCVITLXNRA 226
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGA 234
+ D LD+ D+I+G+ WL A
Sbjct: 227 LKVDLRILDMIGYDVILGMDWLTVYRA 253
>gi|224116520|ref|XP_002317321.1| predicted protein [Populus trichocarpa]
gi|222860386|gb|EEE97933.1| predicted protein [Populus trichocarpa]
Length = 430
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 135 PKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRT--GSATKA 192
P + +++ ++ L D GASH+ +S +V + + +N GV + T G
Sbjct: 304 PDVVAGILQLDTMQIYALIDPGASHSSVSYRIVNNMHVLSSNL-GVGVTVSTPLGENIHI 362
Query: 193 QGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
I RGV L + G+E+ D +PL+L +I+G+ WL
Sbjct: 363 DDIYRGVKLYIGGLELRVDLMPLELYDFYVILGMVWL 399
>gi|154290728|ref|XP_001545955.1| hypothetical protein BC1G_15283 [Botryotinia fuckeliana B05.10]
Length = 738
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 143 EINNKKVVVLTDSGASHNFISNEVVLVLKLPI-TNTEPYGVILRTGSATKAQGICRGVGL 201
+IN + DSGA+ NFI+ E L++P+ T PY + L G + G +
Sbjct: 470 QINGHIQSAMIDSGATGNFIAPEAAKYLEIPLQTKQYPYRLQLVDGQLAGSDGKISQETI 529
Query: 202 -----ILQGVEIVE-DFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
I Q E+++ D +P LG II+G+ WLK I+W + F+
Sbjct: 530 PVRMSITQHTEVIQLDVVP--LGQQQIILGMPWLKAHNPK-IDWAQGVVTFD 578
>gi|62734416|gb|AAX96525.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550230|gb|ABA93027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1506
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFIS------NEVVLV-LKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS +E+ LV LK+P+ P G +
Sbjct: 490 SAPEVILGTFPVNSTPTVILFDSGATHSFISKRFAGAHELSLVKLKIPMRVHTPRGGMTT 549
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C + + +QG+ + + L+ D+I+G+ WL
Sbjct: 550 T-------HYCPSMTVEIQGLIFPANLILLESKDLDVILGMDWL 586
>gi|347441756|emb|CCD34677.1| hypothetical protein [Botryotinia fuckeliana]
Length = 697
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 143 EINNKKVVVLTDSGASHNFISNEVVLVLKLPI-TNTEPYGVILRTGSATKAQG-ICRGVG 200
+IN + DSGA+ NFI+ E L++P+ T PY + L G + G I +
Sbjct: 448 QINGHIQSAMIDSGATGNFIAPEAAKYLEIPLQTKQHPYRLQLVDGQLAGSDGKISQETI 507
Query: 201 LILQGVEIVEDFLPLD---LGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
I G+ + + LD LG II+G+ WL+ I+W + F+
Sbjct: 508 PIRMGITQHTEVIQLDVVPLGQQQIILGMPWLRAHNPK-IDWAQGVVTFD 556
>gi|347440725|emb|CCD33646.1| hypothetical protein [Botryotinia fuckeliana]
Length = 477
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
LE + T+ +N+ + LN+ + +IN + + DSGA+ NFI+ E
Sbjct: 267 LEDEITQNNENEQITPQLNAT---GQAGQIYCRVKINGQIQQAMIDSGATGNFIAPEAAK 323
Query: 169 VLKLPITNTE-PYGVILRTGSATKAQGI----CRGVGL-ILQGVEIVE-DFLPLDLGITD 221
L +P+ + PY + L G + G R V + + Q E+++ D +P LG
Sbjct: 324 YLGVPLQKKQNPYQLQLVDGQLAGSDGNVSQETRPVRMNMTQHSEVIQLDVVP--LGQQQ 381
Query: 222 IIMGIHWLKTLGATHINWKTHSMKFN 247
II+G+ WLK I+W ++ F+
Sbjct: 382 IILGMPWLKAHNP-RIDWSQGTVAFD 406
>gi|357438009|ref|XP_003589280.1| B3 domain-containing protein REM16 [Medicago truncatula]
gi|355478328|gb|AES59531.1| B3 domain-containing protein REM16 [Medicago truncatula]
Length = 423
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 136 KTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGI 195
+T+KL + V++L DSGA+HNFIS ++V+ L T++ G
Sbjct: 290 QTIKLRGRVEGVPVLLLVDSGATHNFISKKLVIELA--------------NMYKTRSTGE 335
Query: 196 CRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKN 255
+ V + + +++ L DL DI++G WL ++G +K R+ +G++
Sbjct: 336 RKQVMVEMGKLKLEIGALVFDLDKVDIVLGTTWLNSIG---------ELKGENRSEMGED 386
Query: 256 QF 257
F
Sbjct: 387 GF 388
>gi|297735014|emb|CBI17376.3| unnamed protein product [Vitis vinifera]
Length = 1567
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILR-TGSATKAQGICRGVGLILQGVE 207
V VL D+GA+H+FIS L L E +I G+ ++ IC+G + L
Sbjct: 429 VRVLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLADRA 488
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGAT 235
+ D LD+ D+I+G+ WL A
Sbjct: 489 LNVDLRILDMTGYDVILGMDWLAVYRAV 516
>gi|90399077|emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
Length = 1265
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%)
Query: 117 AKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITN 176
+ + ++ +SL ++ G S TL+L I V++L DSG+S +F+S+ V+ L +
Sbjct: 424 STSSLMAISLQAIQGTVSAHTLRLQGSIQGFDVLILVDSGSSCSFLSSVVLPHLTGVKSL 483
Query: 177 TEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATH 236
P V + G+ +QG + +F L L D+I+G+ WL+
Sbjct: 484 LTPIQVKVANGTVLYCTSELPAAKWEVQGHQFSTNFKLLPLDNYDMILGMDWLEKYSPMD 543
Query: 237 INWKTHSMKF 246
INW+ +++F
Sbjct: 544 INWQAKTIQF 553
>gi|77555464|gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1360
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 427 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVNTPGGGMTT 486
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 487 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 523
>gi|147839856|emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
Length = 1387
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILR-TGSATKAQGICRGVGLILQGVE 207
V VL D+GA+H+FIS L L E +I G+ ++ IC+G + L
Sbjct: 369 VRVLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLANRA 428
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGA 234
+ D LD+ D+I+G+ WL A
Sbjct: 429 LNVDLRILDMTGYDVILGMDWLAVYRA 455
>gi|147807472|emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILR-TGSATKAQGICRGVGLILQGVE 207
V VL D+GA+H+FIS L L E +I G+ ++ IC+G + L
Sbjct: 530 VRVLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLADRA 589
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGA 234
+ D LD+ D+I+G+ WL A
Sbjct: 590 LNVDLRILDMTGYDVILGMDWLAVYRA 616
>gi|154289800|ref|XP_001545506.1| hypothetical protein BC1G_15972 [Botryotinia fuckeliana B05.10]
Length = 1617
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 143 EINNKKVVVLTDSGASHNFISNEVVLVLKLPI-TNTEPYGVILRTGSATKAQGICRGVGL 201
+IN + DSGA+ NFI+ E L++P+ T PY + L G + G +
Sbjct: 448 QINGHIQSAMIDSGATGNFIAPEAAKYLEIPLQTKQHPYRLQLVDGQLAGSDGKISQETI 507
Query: 202 -----ILQGVEIVE-DFLPLDLGITDIIMGIHWLKTLGATHINW 239
I Q E+++ D +P LG II+G+ WLK I+W
Sbjct: 508 PVRMGITQHTEVIQLDVVP--LGQQQIILGMPWLKAHNP-KIDW 548
>gi|336385818|gb|EGO26965.1| hypothetical protein SERLADRAFT_436788 [Serpula lacrymans var.
lacrymans S7.9]
Length = 520
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 30 WGGFN----SDRIVQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCR---K 82
WG N +DR + P+ R+LT+ E +S ++ G C+ C+EK G CR K
Sbjct: 363 WGARNKERQNDRNRKSGPS---TSTRRLTKDEEESRRKEGRCFICNEKGHIGRNCRNKGK 419
Query: 83 QELQVVLLQEYEAEAQAV--EDVGQE-----REL-ESKPTEGAKNQVVEVSLNSVVGLTS 134
+ V + E + + V ED Q REL E + TE K E ++N+
Sbjct: 420 TPERKVRQTKTEDDTKTVVEEDRVQNIMRMWRELGEDQRTEAMKELEDEATINA------ 473
Query: 135 PKTLKLASEINNK--KVVVLTDSGASHNFISNEVVLVLKLPITNTE 178
+L++ + K + L DSGA+ +F+ + + +LP N++
Sbjct: 474 -NSLQIDCSLKQKTIRTKALIDSGATDDFMDTKFTIRHRLPSKNSQ 518
>gi|77552304|gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1651
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 156 GASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPL 215
GASH+FIS V N + VI G +A +C V L+++GV + L
Sbjct: 626 GASHSFISQAFVKRNGWKTQNLQVPMVIHSPGRDIRADKLCPKVDLVIEGVSFAAKPIVL 685
Query: 216 DLGITDIIMGIHWL 229
D D+I+G+ WL
Sbjct: 686 DSQGLDVILGMDWL 699
>gi|297724521|ref|NP_001174624.1| Os06g0170800 [Oryza sativa Japonica Group]
gi|215766712|dbj|BAG98940.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676759|dbj|BAH93352.1| Os06g0170800 [Oryza sativa Japonica Group]
Length = 263
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%)
Query: 122 VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYG 181
+ +SL ++ G S TL+L I V++L DSG+S +F+S+ V+ L + P
Sbjct: 1 MAISLQAIQGTVSAHTLRLQGSIQGFDVLILVDSGSSCSFLSSVVLPHLTGVKSLLTPVQ 60
Query: 182 VILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKT 241
V + G+ +QG + DF L L D+I+G+ WL+ INW+
Sbjct: 61 VKVANGAVLSCTSELPAAKWEVQGHQFSTDFKLLPLDNYDMILGMDWLEKYSPMDINWQA 120
Query: 242 HSMKF 246
+++F
Sbjct: 121 KTIQF 125
>gi|77555436|gb|ABA98232.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1522
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 394 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 453
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 454 T-------HYCPAVTVEIQGLIFPANLILLESKDLDVILGMDWL 490
>gi|108707286|gb|ABF95081.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1329
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ P G+ +A C
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTP-------GNDMRAAHYC 451
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+++G+ WL
Sbjct: 452 PSVTIEIKRSPFLSNLILLESKDLDVVLGMDWL 484
>gi|147795669|emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
Length = 1495
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILR-TGSATKAQGICRGVGLILQGVE 207
V VL D+GA+H+FIS L L E +I G+ ++ IC+G + L
Sbjct: 445 VRVLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLADRA 504
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGAT 235
+ D LD+ D+I+G+ WL A
Sbjct: 505 LNVDLRILDMTGYDVILGMDWLAVYRAV 532
>gi|320031435|gb|EFW13399.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 666
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN ++++VL D+G+ N +S + +LKLP+ N ++++TG T C V + +
Sbjct: 203 INQQELMVLIDTGSEINLLSQKYTEMLKLPMENKLQVTMVVQTGEVTPFYTFCDEVPVQI 262
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHW 228
+ FL G +I+G W
Sbjct: 263 GDIVTHTPFLIFKRGDQQLILGRPW 287
>gi|238576535|ref|XP_002388068.1| hypothetical protein MPER_12960 [Moniliophthora perniciosa FA553]
gi|215449052|gb|EEB88998.1| hypothetical protein MPER_12960 [Moniliophthora perniciosa FA553]
Length = 601
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 81/209 (38%), Gaps = 30/209 (14%)
Query: 52 KLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELES 111
+L+EAE Q + GLC+ C + GHR RK+ + A + E ELE
Sbjct: 179 RLSEAERQDYMKKGLCFYCSK---TGHRERKKPSAAETFAKIRA-------LTGEMELEE 228
Query: 112 KPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL- 170
K K + +SL VG N ++ L DSGA FIS + L
Sbjct: 229 K----DKINSIHLSLMYKVG------------NKNAEIKALIDSGAGGRFISLDFAKTLG 272
Query: 171 KLPITNTEPYGVILRTGSATKAQGICRGVGLILQG--VEIVEDFLPLDLGITDIIMGIHW 228
K +P V G+ K I V E+F+ LG +I+G+ W
Sbjct: 273 KRWNKLRKPIKVYNVDGTPNKTAMITHSVLFEYSSGTKTFCEEFMISGLGKEKLILGLPW 332
Query: 229 LKTLGATHINWKTHSMKFNTRNTIGKNQF 257
L+ +I+W T + F + QF
Sbjct: 333 LQNHNP-NIDWVTGEVVFRPNRKLRIRQF 360
>gi|77556354|gb|ABA99150.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1082
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P
Sbjct: 162 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTP------ 215
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
G C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 216 -GGGMTTTHYCPSVTIEIQGLIFPANLILLESKDLDVILGMDWL 258
>gi|32487715|emb|CAE05392.1| OSJNBa0022F16.16 [Oryza sativa Japonica Group]
Length = 1402
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN+ V VL DSGASH+FIS E L + ++ G C V + L
Sbjct: 307 INSTPVKVLLDSGASHSFISLEASQQHNLTLVGVRKPMIVHSPGGEVTVSHACIDVPIHL 366
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V + + L DII+G+ WL
Sbjct: 367 RDVVFPSNLMVLIPQTLDIILGMDWL 392
>gi|110288888|gb|AAP53008.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1595
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 467 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 526
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 527 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 563
>gi|238576134|ref|XP_002387926.1| hypothetical protein MPER_13120 [Moniliophthora perniciosa FA553]
gi|215448793|gb|EEB88856.1| hypothetical protein MPER_13120 [Moniliophthora perniciosa FA553]
Length = 560
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 90/224 (40%), Gaps = 33/224 (14%)
Query: 52 KLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQ---VVLLQEYEAEAQA-----VEDV 103
+L+EAE Q + GLC+ C + GHR R L+ +Q + + A + +
Sbjct: 272 RLSEAERQDYMKKGLCFYCSKT---GHRVRDCPLKGGNSAPVQGRKKPSAAETFAKIRAL 328
Query: 104 GQERELESKPTE-GAKNQVVEVSLNSVVGLTSPKTLKLASEINNK--KVVVLTDSGASHN 160
+E ELE K G Q + NS+ L L +I NK ++ L DS A
Sbjct: 329 TREMELEEKDKMLGLIEQSATLERNSI-------HLSLTYKIGNKNAEIKALIDSRAGGR 381
Query: 161 FISNEVVLVL-----KLPITNTEPYGVILRTGSATKAQGICRGVGLILQG--VEIVEDFL 213
FIS + L KL +P V G+ K I V E+F+
Sbjct: 382 FISPDFAKTLGNRWNKL----RKPIKVYNVDGTPNKTAMITHSVLFEYSSGTKTFCEEFM 437
Query: 214 PLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQF 257
LG +I+G+ WL+ +INW T + F + +F
Sbjct: 438 ISGLGKEKLILGLPWLQNHNP-NINWVTGEVAFRPNRKVQIKKF 480
>gi|449457221|ref|XP_004146347.1| PREDICTED: uncharacterized protein LOC101206063 [Cucumis sativus]
Length = 1115
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 143 EINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKA-QGICRGVGL 201
+IN ++ + + D+GASHNF++ + L TN E G + S +A +G+ RGV +
Sbjct: 441 KINGREAIAMFDTGASHNFMNVNEAKRIGLKFTNEE--GTVKAVNSKAQAIKGVARGVTV 498
Query: 202 ILQGVEIVEDFLPLDLGITDIIMGI 226
+ + DF L + DI++G+
Sbjct: 499 KIGDWQGKLDFTVLPMDDFDIVLGL 523
>gi|19225016|gb|AAL86492.1|AC077693_31 putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 396 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 455
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 456 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 492
>gi|78708482|gb|ABB47457.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1461
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 369 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 428
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 429 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 465
>gi|108862521|gb|ABA97778.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1557
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 467 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 526
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 527 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 563
>gi|77555411|gb|ABA98207.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1562
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 434 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 493
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 494 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 530
>gi|62733353|gb|AAX95470.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|108864030|gb|ABA91610.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1441
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 397 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 456
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 457 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 493
>gi|38605882|emb|CAD40008.3| OSJNBb0052B05.11 [Oryza sativa Japonica Group]
Length = 1232
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 29/168 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA + G K+ V+
Sbjct: 225 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRSNNGGKD-VI 261
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L D GASH+FIS V +L +
Sbjct: 262 RGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDFGASHSFISVPFVGRNQLGVERLRN 321
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
+I G A+ V + +QG+ D + LD D+I+G++
Sbjct: 322 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLIILDTKNLDVILGMN 369
>gi|62733354|gb|AAX95471.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|108864031|gb|ABG22378.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1441
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 397 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 456
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 457 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 493
>gi|50080316|gb|AAT69650.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1458
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 396 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 455
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 456 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 492
>gi|38345904|emb|CAE03548.2| OSJNBa0060D06.14 [Oryza sativa Japonica Group]
Length = 1458
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 396 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 455
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 456 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 492
>gi|16905208|gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 396 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 455
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 456 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 492
>gi|22725995|gb|AAN04995.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1413
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 368 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 427
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 428 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 464
>gi|50080333|gb|AAT69667.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 396 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 455
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 456 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 492
>gi|347832557|emb|CCD48254.1| hypothetical protein [Botryotinia fuckeliana]
Length = 391
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 143 EINNKKVVVLTDSGASHNFISNEVVLVLKLPI-TNTEPYGVILRTGSATKAQG------I 195
+IN + DSGA+ NFI+ E L++P+ T PY + L G + G I
Sbjct: 72 QINGHIQSAMIDSGATGNFIAPEAAKYLEIPLQTKQHPYRLQLVDGQLAGSDGKISQETI 131
Query: 196 CRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+G+ I D +P LG II+G+ WLK I+W + F+
Sbjct: 132 PVRMGITQHTEAIQLDVVP--LGQQQIILGMPWLKAHNPK-IDWAQGIVTFD 180
>gi|110288739|gb|AAP52510.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1416
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 371 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 430
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 431 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 467
>gi|116309457|emb|CAH66529.1| H0502B11.9 [Oryza sativa Indica Group]
Length = 1450
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 322 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 381
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 382 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 418
>gi|15128451|dbj|BAB62635.1| putative polyprotein [Oryza sativa Japonica Group]
gi|20804440|dbj|BAB92137.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353682|gb|AAU44248.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 396 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 455
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 456 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 492
>gi|38344617|emb|CAE02516.2| OSJNBb0003A12.3 [Oryza sativa Japonica Group]
gi|38347085|emb|CAE05109.2| OSJNBa0001M07.5 [Oryza sativa Japonica Group]
Length = 1471
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 343 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 402
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 403 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 439
>gi|255574763|ref|XP_002528289.1| hypothetical protein RCOM_0456620 [Ricinus communis]
gi|223532289|gb|EEF34091.1| hypothetical protein RCOM_0456620 [Ricinus communis]
Length = 247
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
Query: 51 RKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELE 110
+++ E + L + DE+F GH+C+K++L +V++Q+ + E +G++ +
Sbjct: 101 KEMNEKRAXEKRAKNLYFWYDERFVLGHQCKKKQLYMVIVQDIMENGK--EPLGEQIHWD 158
Query: 111 SKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
+ E + ++ V L +T+KL K + +L S +H F+ ++ L
Sbjct: 159 NFDLEETAPTISLYAMRGVEDLAY-QTIKLIGNCRRKAIHILIGSVNTHKFLDRGLIKGL 217
Query: 171 KLPITNTEPYGVILRTGSATKAQGIC 196
+ +P + + G +C
Sbjct: 218 SCSLKLIDPVQITIANGQEVSCTHMC 243
>gi|13129427|gb|AAK13085.1|AC078839_1 Similar to Sorghum bicolor 22 kDakafirinclusterpolyprotein [Oryza
sativa Japonica Group]
Length = 1484
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 369 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 428
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 429 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 465
>gi|77556355|gb|ABA99151.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 836
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 268 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 327
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 328 T-------HYCPSVTIEIQGLIFPANLILLESKDLDVILGMDWL 364
>gi|28273360|gb|AAO38446.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|62733520|gb|AAX95637.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Oryza sativa Japonica Group]
gi|108710593|gb|ABF98388.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1229
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P
Sbjct: 101 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTP------ 154
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
G C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 155 -GGGMTTTHYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 197
>gi|19881710|gb|AAM01111.1|AC098682_15 putative retroelement [Oryza sativa Japonica Group]
Length = 1043
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 187 GSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
G + +GV QG V D L LG DII+G+ WL+ I+WK +F
Sbjct: 303 GGRMQCNSCVKGVEWWCQGSSFVTDLKVLALGGYDIILGMEWLEQFSPMWIDWKRKKRRF 362
Query: 247 NTRN 250
N ++
Sbjct: 363 NLQD 366
>gi|154295288|ref|XP_001548080.1| hypothetical protein BC1G_13225 [Botryotinia fuckeliana B05.10]
Length = 1296
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 143 EINNKKVVVLTDSGASHNFISNEVVLVLKLPI-TNTEPYGVILRTGSATKAQGICRGVGL 201
+IN + DSGA+ NFI+ E L++P+ T PY + L G + G +
Sbjct: 448 QINGHIQSAMIDSGATGNFIAPEAAKYLEIPLQTKQYPYRLQLVDGQLAGSDGKISQETI 507
Query: 202 -----ILQGVEIVE-DFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
I Q E+++ D +P LG II+G+ WLK I+W + F+
Sbjct: 508 PVRMSITQHTEVIQLDVVP--LGQQQIILGMPWLKAHNP-KIDWAQGVVTFD 556
>gi|110289611|gb|AAP55099.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1565
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 437 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 496
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 497 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 533
>gi|238579193|ref|XP_002388970.1| hypothetical protein MPER_11956 [Moniliophthora perniciosa FA553]
gi|215450756|gb|EEB89900.1| hypothetical protein MPER_11956 [Moniliophthora perniciosa FA553]
Length = 517
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 13/214 (6%)
Query: 52 KLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQ---VVLLQEYEAEAQAVEDVGQERE 108
+L+E+E Q + GLC+ C + GHR R L+ +QE + AVE + R
Sbjct: 71 RLSESERQDYMKKGLCFYCSKT---GHRVRDCPLKGGNSAPVQE-RKKPSAVETFAKIRA 126
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNK--KVVVLTDSGASHNFISNEV 166
L + K++++ + S + L L +I NK ++ L DSGA FIS +
Sbjct: 127 LTGEMELEEKDKMLGLIEQSATLERNSIHLSLTYKIGNKNAEIKALIDSGAGGKFISPDF 186
Query: 167 VLVLKLPITN-TEPYGVILRTGSATKAQGICRGVGLILQG--VEIVEDFLPLDLGITDII 223
L +P V G+ K I V E+F+ LG +I
Sbjct: 187 AKTLGKQWNKLRKPIKVYNVDGTPNKTVMITHSVLFEYSSGTKTFCEEFMISGLGKEKLI 246
Query: 224 MGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQF 257
+ + WL+ +I+W T + F I +F
Sbjct: 247 LCLPWLQNHNP-NIDWITGEIAFRPNRKIHIKRF 279
>gi|51038165|gb|AAT93968.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51038205|gb|AAT94008.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1500
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 372 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 431
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 432 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 468
>gi|37991885|gb|AAR06331.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1184
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P
Sbjct: 282 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTP------ 335
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
G C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 336 -GGGMTTTHYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 378
>gi|39546203|emb|CAE04628.3| OSJNBa0028I23.10 [Oryza sativa Japonica Group]
Length = 1462
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 396 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 455
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 456 T-------HYCPSVTVEIQGLIFPTNLILLESKDLDVILGMDWL 492
>gi|108709591|gb|ABF97386.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1200
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P
Sbjct: 282 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTP------ 335
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
G C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 336 -GGGMTTTHYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 378
>gi|90265159|emb|CAH67785.1| H0201G08.12 [Oryza sativa Indica Group]
Length = 861
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
+PK + +N+ VL DSGASH+FIS V+ LK+P+ P
Sbjct: 137 AAPKVVLGTFPVNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTP------ 190
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
G+ + C V + ++ + + + L+ D+I+G+ WL
Sbjct: 191 -GNDMRTAHYCPSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 233
>gi|77554980|gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1406
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 446 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 505
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 506 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 542
>gi|62733023|gb|AAX95140.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549634|gb|ABA92431.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1313
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
+PK + +N+ VL DSGASH+FIS V+ LK+P+ P
Sbjct: 290 AAPKVVLGTFPVNSYPATVLFDSGASHSFISKRFARTHGLSVVELKIPMQVHTP------ 343
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
G+ + C V + ++ + + + L+ D+I+G+ WL
Sbjct: 344 -GNDMRTAHYCPSVTIEIKRSPFLSNLVLLESKDLDVILGMDWL 386
>gi|55733831|gb|AAV59338.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1238
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P
Sbjct: 110 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTP------ 163
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
G C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 164 -GGGMTTTHYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 206
>gi|86371679|gb|ABC94893.1| polyprotein [Oryza australiensis]
Length = 1469
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEVV-------LVLKLPITNTEPYGVILRTGSATKAQGIC 196
IN+ V VL DSGASH+FIS++V + LK P+ P G I C
Sbjct: 371 INSTLVKVLFDSGASHSFISSQVSKQHHLHQVALKRPMLVHSPGGDI-------TVPHAC 423
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ V + + + L D+I+G+ WL
Sbjct: 424 INVPIRIRDVVFLSNLMVLSPQTIDVILGMDWL 456
>gi|87162498|gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger,
CCHC-type; Peptidase aspartic, active site;
Retrotransposon gag protein [Medicago truncatula]
Length = 912
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI--LRTGSATKAQGICRGVGL 201
I+N +V + D+GA+H FI+ + V L L +++ V+ GS T + +C L
Sbjct: 332 ISNTPLVAIIDTGATHCFIAFDCVSALGLDLSDMNGEMVVETPAKGSVTTSL-VCLKCPL 390
Query: 202 ILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNT 248
+ G + D + L L D+I+G++WL+ IN + S+ F++
Sbjct: 391 SMFGRDFEMDLVCLPLSGMDVILGMNWLE-YNHVLINCFSKSVHFSS 436
>gi|154296535|ref|XP_001548698.1| hypothetical protein BC1G_12842 [Botryotinia fuckeliana B05.10]
Length = 1618
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 143 EINNKKVVVLTDSGASHNFISNEVVLVLKLPI-TNTEPYGVILRTGSATKAQGICRGVGL 201
+IN + DSGA+ NFI+ E L++P+ T PY + L G + G +
Sbjct: 448 QINGHIQSAMIDSGATGNFIAPEAAKYLEIPLQTKQYPYRLQLVDGQLAGSDGKISQETI 507
Query: 202 -----ILQGVEIVE-DFLPLDLGITDIIMGIHWLKTLGATHINW 239
I Q E+++ D +P LG II+G+ WLK I+W
Sbjct: 508 PVRMGITQHTEVIQLDVVP--LGQQQIILGMPWLKAHNP-KIDW 548
>gi|47824970|gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 134 SPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLK-LPITNTEPYGVILRTGSATKA 192
SP + ++ V L D GAS +F++ V LP EP+ V G + A
Sbjct: 460 SPNVVTAMIKVFAFYVYALLDPGASLSFVTPYVANKFDVLPERLCEPFCVSTPVGESILA 519
Query: 193 QGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+ + R + + + D + LD+ D+I+G+ WL A+ I+ +T +KF
Sbjct: 520 ERVYRDCPVSINHKSTMVDLIELDMVDFDVILGMDWLHACYAS-IDCRTRVVKFQ 573
>gi|116308939|emb|CAH66066.1| OSIGBa0092O07.1 [Oryza sativa Indica Group]
gi|116309115|emb|CAH66220.1| OSIGBa0157N01.6 [Oryza sativa Indica Group]
Length = 1445
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
T+P+ + +N+ VL DSGASH+FIS V+ LK+P+ P
Sbjct: 388 TAPEVVLGTFPVNSYPATVLFDSGASHSFISKRFAGAHGLSVVELKIPMQVHTP------ 441
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
G+ + C V + ++ + + + L+ D+I+G+ WL
Sbjct: 442 -GNDMRIAHYCPSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 484
>gi|62733821|gb|AAX95930.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550638|gb|ABA93435.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1169
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ V+L DSGA+H+FIS ++ LK+P+ P G + T C
Sbjct: 473 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTT-------HYC 525
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + +QG+ + + L+ D+I+G+ WL
Sbjct: 526 PSVTVEIQGLIFPANLILLESKDLDVILGMDWL 558
>gi|13699784|gb|AAK38383.1|AC079028_7 hypothetical protein [Arabidopsis thaliana]
Length = 712
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 143 EINNKKVVVLTDSGASHNFISNEVVLVLKLPI-TNTEPYGVILRTGSATKAQGICRGVGL 201
+I + +VL DSGA+H+F+S ++ K +P V G A +G G+ +
Sbjct: 270 QIGGIETMVLFDSGATHSFVSPRMIGKGKFQKEPRMDPTVVNAAGGQAMIPEGQVCGIPV 329
Query: 202 ILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGAT 235
++G+E+ D + + L ++I+G+ WL AT
Sbjct: 330 SIKGIEMPVDLIIIPLEKHEVILGMDWLGKYKAT 363
>gi|47824950|gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 134 SPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLK-LPITNTEPYGVILRTGSATKA 192
SP + ++ V L D GAS +F++ V LP EP+ V G + A
Sbjct: 466 SPNVVTAMIKVFAFYVYALLDPGASLSFVTPYVANKFDVLPERLCEPFCVSTPVGESILA 525
Query: 193 QGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+ + R + + + D + LD+ D+I+G+ WL A+ I+ +T +KF
Sbjct: 526 ERVYRDCPVSINHKSTMVDLIELDMVDFDVILGMDWLHACYAS-IDCRTRVVKFQ 579
>gi|108706366|gb|ABF94161.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1217
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 32/199 (16%)
Query: 50 FRKLTEAELQSNQEC-GLCYKCDEKFSPGHRCRKQ-ELQVVLLQEYEAEAQAVEDVGQER 107
FR + L+S + GLC+ C E++ H+C + +LQVV E EA +++
Sbjct: 518 FRDDKVSALKSYRRVKGLCFTCGERWGKDHKCAQTVQLQVV---EELLEAFQIDETDNTM 574
Query: 108 ELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV 167
+P NQ++ +SLN+ G S ++L++ + + +
Sbjct: 575 VTSPEPVL-ENNQLMAISLNAYNGTDSTRSLRIVHHLQGVVKLPVPVKVT---------- 623
Query: 168 LVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIH 227
+ G + + LQG +F L L D I+G+
Sbjct: 624 ----------------IADGGLLQCEKQLPDCAWWLQGRCYKSNFKLLPLSGYDAILGMD 667
Query: 228 WLKTLGATHINWKTHSMKF 246
WL LG I+W+ +++
Sbjct: 668 WLVGLGVMKIDWEQKWLEY 686
>gi|22725944|gb|AAN04954.1| Putative retroelement [Oryza sativa Japonica Group]
gi|78708171|gb|ABB47146.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 813
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 187 GSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
G + +GV QG V D L LG DII+G+ WL+ I+WK +F
Sbjct: 277 GGRMQCNSCVKGVEWWCQGSSFVTDLKVLALGGYDIILGMEWLEQFSPMWIDWKRKKRRF 336
Query: 247 NTRN 250
N ++
Sbjct: 337 NLQD 340
>gi|50878348|gb|AAT85123.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1495
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ P G+ + C
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFARTHGLSVVELKIPMQVHTP-------GNDMRTAHYC 451
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+I+G++WL
Sbjct: 452 PSVTIEIKRSPFLSNLILLESKDLDVILGMNWL 484
>gi|147769429|emb|CAN61575.1| hypothetical protein VITISV_014037 [Vitis vinifera]
Length = 503
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILR-TGSATKAQGICRGVGLILQGVE 207
V VL D+GA+H+FIS L E +I G+ +K IC+G + L +
Sbjct: 339 VHVLFDTGATHSFISISCANASGLKSERVENLLLIESPMGTNSKVDRICKGCVITLVDIA 398
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGA 234
+ D LD+ D+I+G+ WL A
Sbjct: 399 LNVDLRILDMTGYDVILGMDWLAVYRA 425
>gi|62732819|gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550206|gb|ABA93003.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1436
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN+ V VL DSGASH+FIS + L + ++ G C V + L
Sbjct: 372 INSTPVKVLFDSGASHSFISRKASQKHNLTLVGLRKPMIVHSPGGEITVSHACIDVPIRL 431
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V + L L D+I+G+ WL
Sbjct: 432 RDVVFPSNLLVLIPQTLDVILGMDWL 457
>gi|113205348|gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 149 VVVLTDSGASHNFISNEVVLVLK-LPITNTEPYGVILRTGSATKAQGICRGVGLILQGVE 207
V L D GAS +F++ V + LP EP+ V G + A+ + R + +
Sbjct: 379 VYALLDPGASLSFVTPYVANQFEVLPERLCEPFCVSTPVGESILAERVYRDCPVSISHKS 438
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRN 250
D + LD+ D+I+G+ WL A+ ++ +T ++KF N
Sbjct: 439 TKADLVELDMVNFDVILGMDWLHACYAS-LDCRTRAVKFQFLN 480
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 149 VVVLTDSGASHNFISNEVVLVLK-LPITNTEPYGVILRTGSATKAQGICRGVGLILQGVE 207
V L D GAS +F++ V + LP EP+ V G + A+ + R + +
Sbjct: 1889 VYALLDPGASLSFVTPYVANQFEVLPERLCEPFCVSTPVGESILAERVYRDCPVSISHKS 1948
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRN 250
D + LD+ D+I+G+ WL A+ ++ +T ++KF N
Sbjct: 1949 TKADLVELDMVNFDVILGMDWLHACYAS-LDCRTRAVKFQFLN 1990
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 149 VVVLTDSGASHNFISNEVVLVLK-LPITNTEPYGVILRTGSATKAQGICRGVGLILQGVE 207
V L D GAS +F++ V + LP EP+ V G + A+ + R + +
Sbjct: 3399 VYALLDPGASLSFVTPYVANQFEVLPERLCEPFCVSTPVGESILAERVYRDCPVSISHKS 3458
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRN 250
D + LD+ D+I+G+ WL A+ ++ +T ++KF N
Sbjct: 3459 TKADLVELDMVNFDVILGMDWLHACYAS-LDCRTRAVKFQFLN 3500
>gi|77550924|gb|ABA93721.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 435
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 113 PTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKL 172
P + +++ +S +V+G S + ++L I +V++L DSG+SH+FIS ++V L+
Sbjct: 329 PGDSEDGELLAISKEAVLGTESSRIVRLQGLIERHEVLMLVDSGSSHSFISEQLVHRLQG 388
Query: 173 PITNTEPYGVILRTG 187
++ P V + G
Sbjct: 389 VCSSVTPLKVKIADG 403
>gi|62701703|gb|AAX92776.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550523|gb|ABA93320.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1429
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 69/170 (40%), Gaps = 29/170 (17%)
Query: 66 LCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
LC+ C F PGH +C K Q + QA +P G K+ V+
Sbjct: 341 LCFNC---FEPGHFADKCPKPRRQ---------QGQA----------PPRPNNGGKD-VI 377
Query: 123 EVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
+N V LT+P + I++ +L DSGASH FI V +L +
Sbjct: 378 RGRVNHVTAEDVLTTPDVIIGTFLIHSIPATILFDSGASHLFIFVPFVGRNQLGVERLRN 437
Query: 180 YGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+I G A+ V + +QG+ D + L D+I+G++ L
Sbjct: 438 PLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLYTKNLDVILGMNLL 487
>gi|320033195|gb|EFW15144.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 802
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 136 KTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGI 195
++L IN ++++ L D+G+ N +S + +LKLP+ N ++++TG
Sbjct: 651 RSLYAPVTINQQELMALIDTGSEINLLSRKYAEMLKLPMENKPRVTMVVQTGEVAPFYAF 710
Query: 196 CRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
C V + + + FL + G +I+G W
Sbjct: 711 CDEVPVQIGDIVTHTPFLIFEGGDQQLILGRPW 743
>gi|218199463|gb|EEC81890.1| hypothetical protein OsI_25707 [Oryza sativa Indica Group]
Length = 839
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 179 PYGVILR-------TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKT 231
PY +IL G + G+CR + L + D LDL DII+G+ WL+T
Sbjct: 619 PYAIILSGLRFVVANGDRLVSPGLCRNLTLNIDDEAFSVDCFALDLCAVDIILGMQWLQT 678
Query: 232 LGATHINWKTHSM 244
LG ++K M
Sbjct: 679 LGPILWDFKNMRM 691
>gi|54287641|gb|AAV31385.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1493
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 397 SAPEVILGTFPVNSTLAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 456
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 457 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 493
>gi|77555610|gb|ABA98406.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1611
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ P G+ + C
Sbjct: 512 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTP-------GNDMRTSHYC 564
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+I+G+ WL
Sbjct: 565 PSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 597
>gi|154290730|ref|XP_001545956.1| hypothetical protein BC1G_15284 [Botryotinia fuckeliana B05.10]
Length = 1618
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 143 EINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTE-PYGVILRTGSATKAQGICRGVGL 201
+IN + DSGA+ NFI+ E L++P+ + PY + L G + G +
Sbjct: 448 QINGHIQSAMIDSGATGNFIAPEAAKYLEIPLQRKQYPYRLQLVDGQLAGSDGKISQETI 507
Query: 202 -----ILQGVEIVE-DFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
I Q E+++ D +P LG II+G+ WLK I+W + F+
Sbjct: 508 PVRMSITQHTEVIQLDVVP--LGQQQIILGMPWLKAHNP-KIDWAQGVVTFD 556
>gi|77552016|gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1712
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN+ V VL DSGASH+FIS + L + ++ G C V ++L
Sbjct: 713 INSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSPGGEITVSHACIDVPILL 772
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V + + L D+I+G+ WL
Sbjct: 773 RDVVFPSNLMVLIPQTLDVILGMDWL 798
>gi|14716942|emb|CAC44140.1| putative polyprotein [Cicer arietinum]
Length = 318
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 126 LNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILR 185
+N+ G S ++ EI + L DSGA+H+FI+ V LKL ++ P+ +++
Sbjct: 134 VNAEEGNPSGNLIQRDCEIAGNTLTALFDSGATHSFIAMGCVNRLKLSVS-ALPFDLVVS 192
Query: 186 TGSAT-KAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T + T C + +Q + + + + L L ++I+G+ W+
Sbjct: 193 TPAKTLTVNSACLHCRMTIQNRDFLVNLICLPLQSLEVILGMDWM 237
>gi|322711855|gb|EFZ03428.1| ATP-dependent DNA helicase PIF1 [Metarhizium anisopliae ARSEF 23]
Length = 1829
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 140 LASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTE-PYGVILRTGSA-TKAQGICR 197
L +E+ +V +L DSGA N+IS VV +LP + E PY + G GI
Sbjct: 1501 LDAEVMGHRVRILVDSGAMGNYISPRVVNRYQLPWKHKEAPYELTDIEGKLFAYNDGIIN 1560
Query: 198 ----GVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN 247
+ + +QG V +D+ D+++G WL INW+T +K+N
Sbjct: 1561 QETDHLEVQIQGHSEVIQLDVMDVSEHDLVLGYPWLWESNPL-INWRTGQLKWN 1613
>gi|108864417|gb|ABA93974.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1343
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 396 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 455
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG + + L+ D+I+G+ WL
Sbjct: 456 T-------HYCPSVTVEIQGSIFPANLILLESKDLDVILGMDWL 492
>gi|242075268|ref|XP_002447570.1| hypothetical protein SORBIDRAFT_06g004067 [Sorghum bicolor]
gi|241938753|gb|EES11898.1| hypothetical protein SORBIDRAFT_06g004067 [Sorghum bicolor]
Length = 908
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN+ +L DSGASH FIS V +P+ + ++ G C L L
Sbjct: 268 INSIPATILFDSGASHTFISQAFVRDHSIPLVAMITHMLVNSPGGTIPVSYCCPSASLSL 327
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWLK 230
+ V+ + + D+I+G+ W+K
Sbjct: 328 RRVDFPISPMVMRTSGIDMILGLDWMK 354
>gi|8778575|gb|AAF79583.1|AC007945_3 F28C11.8 [Arabidopsis thaliana]
Length = 368
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 135 PKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQG 194
P ++ ++ +VV++ DSGAS NF+++ + L PI T + +L G QG
Sbjct: 152 PNIMEFKGTVDGHEVVIIVDSGASKNFVASWLSDKLDRPIEPTPRFRALLADGRIESFQG 211
Query: 195 ICRGVGLILQGVEIVEDFLPLDLGITDIIMG 225
+ + + + D LG DII G
Sbjct: 212 KYSNLPITIGSETLYVDCFLFTLGGGDIIFG 242
>gi|77554740|gb|ABA97536.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1516
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ P G+ + C
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTP-------GNDMRTAHYC 451
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+I+G+ WL
Sbjct: 452 PSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 484
>gi|147828587|emb|CAN59996.1| hypothetical protein VITISV_020887 [Vitis vinifera]
Length = 701
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILR-TGSATKAQGICRGVGLILQGVE 207
V VL D+GA+H+FIS L L E +I G + IC+G + L
Sbjct: 9 VRVLFDTGATHSFISASCANALGLKTERVENLLLIESPMGMNXRVDRICKGCVITLADRA 68
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGA 234
+ D LD+ D+I+G+ WL A
Sbjct: 69 LNVDLRILDMXGYDVILGMDWLTVYRA 95
>gi|50878352|gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 396 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 455
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG + + L+ D+I+G+ WL
Sbjct: 456 T-------HYCPSVTVEIQGSIFPANLILLESKDLDVILGMDWL 492
>gi|48843822|gb|AAT47081.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 396 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 455
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG + + L+ D+I+G+ WL
Sbjct: 456 T-------HYCPSVTVEIQGSIFPANLILLESKDLDVILGMDWL 492
>gi|38569190|emb|CAE02978.3| OSJNBa0086B14.15 [Oryza sativa Japonica Group]
Length = 1516
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ P G+ + C
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTP-------GNDMRTAHYC 451
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+I+G+ WL
Sbjct: 452 PSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 484
>gi|108708773|gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1548
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 434 SAPEVILGTFPVNSTPAVILFDSGATHSFISKLFAGAHGLSLVKLKIPMRVHTPGGGMTT 493
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 494 T-------HYCPAVTVEIQGLIFPANLILLESKDLDVILGMDWL 530
>gi|50511449|gb|AAT77372.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51854392|gb|AAU10772.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1501
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ P G+ + C
Sbjct: 384 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMKVHTP-------GNDMRTAHYC 436
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+I+G+ WL
Sbjct: 437 PSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 469
>gi|21741068|emb|CAD41692.1| OSJNBb0015D13.7 [Oryza sativa Japonica Group]
Length = 1516
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ P G+ + C
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTP-------GNDMRTAHYC 451
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+I+G+ WL
Sbjct: 452 PSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 484
>gi|356551468|ref|XP_003544097.1| PREDICTED: uncharacterized protein LOC100808479 [Glycine max]
Length = 600
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTH 242
++R G+ +C V + +QG + DF + L D+++G+ WLK+LG N+
Sbjct: 1 MVRNGNELDCLHLCNNVSIHVQGHVFIVDFHVMSLTGADLVLGVQWLKSLGLILKNYSDL 60
Query: 243 SMKF 246
+M+F
Sbjct: 61 TMQF 64
>gi|255563340|ref|XP_002522673.1| conserved hypothetical protein [Ricinus communis]
gi|223538149|gb|EEF39760.1| conserved hypothetical protein [Ricinus communis]
Length = 162
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 98 QAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGA 157
QA E V ER E + K+ VE+SL+++ G S TLK+ +N K +++L DSG+
Sbjct: 98 QAYEVVEMER-AEFNEEKIVKDGNVEISLHAIKGSGSMNTLKIKGMVNGKDILILIDSGS 156
Query: 158 SHNF 161
+H+F
Sbjct: 157 THSF 160
>gi|116309091|emb|CAH66198.1| OSIGBa0148D14.4 [Oryza sativa Indica Group]
Length = 1516
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ P G+ + C
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTP-------GNDMRTAHYC 451
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+I+G+ WL
Sbjct: 452 PSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 484
>gi|50300548|gb|AAT73689.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1516
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ P G+ + C
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGMHGLSVVELKIPMQVHTP-------GNDMRTAHYC 451
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+I+G+ WL
Sbjct: 452 PSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 484
>gi|255571683|ref|XP_002526785.1| conserved hypothetical protein [Ricinus communis]
gi|223533861|gb|EEF35591.1| conserved hypothetical protein [Ricinus communis]
Length = 102
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLC+ CDEKF HRC+K VL + ++ +
Sbjct: 8 GLCFNCDEKFEIRHRCKKLFWLEVL----------------------AEEDEPDDEEPAI 45
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKL 172
SL+++ + + +T+++ IN ++VL DSG++ F++ ++ L++
Sbjct: 46 SLHAIFDIQTTQTMQVEGIINGFPLLVLIDSGSTPRFVNEALIHQLQI 93
>gi|55168164|gb|AAV44031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733814|gb|AAV59321.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1505
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ P G+ + C
Sbjct: 388 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTP-------GNDMRTAHYC 440
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+I+G+ WL
Sbjct: 441 PSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 473
>gi|28209485|gb|AAO37503.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1079
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 396 SAPEVILGTFPVNSTPAVILFDSGATHSFISKLFAGAHGLSLVKLKIPMRVHTPGGGMTT 455
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 456 T-------HYCPAVTVEIQGLIFPANLILLESKDLDVILGMDWL 492
>gi|326437573|gb|EGD83143.1| hypothetical protein PTSG_12079 [Salpingoeca sp. ATCC 50818]
Length = 1848
Score = 42.0 bits (97), Expect = 0.27, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 39/186 (20%)
Query: 66 LCYKCDEKFSPGHR---CRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVV 122
+C+ C +PGHR CRK+ L + R+ +P G VV
Sbjct: 746 VCFYCR---TPGHRIRDCRKRML-----------------ADKRRQQPHRPQPGRTAAVV 785
Query: 123 EVSLNS--------VVGLTSPKTL----KLASEINNKKVVVLTDSGASHNFISNEVVLVL 170
+ + +S V TS + + + N ++L D+GA + +S +V
Sbjct: 786 QATHDSFESEAASVAVASTSARDVLPPFVVEGTFNGANTMMLVDTGALVSLVSADVAD-- 843
Query: 171 KLPITNTEPYGVILRTGSATK--AQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
+ P G++LR + + +G V L + GV++ DF+ + +I+G+
Sbjct: 844 SAGVGPLRPSGIVLRGANQQRIHVKGCMSQVPLCIDGVQLQHDFIVAERLAHPVILGVEL 903
Query: 229 LKTLGA 234
L LGA
Sbjct: 904 LSALGA 909
>gi|38344008|emb|CAE03176.2| OSJNBa0070O11.7 [Oryza sativa Japonica Group]
Length = 1501
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS ++ LK+P+ P G+ + C
Sbjct: 384 VNSYPATVLFDSGASHSFISKRFAGTHGLSIVELKIPMQVHTP-------GNDMRTAHYC 436
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+I+G+ WL
Sbjct: 437 PSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 469
>gi|224133300|ref|XP_002321533.1| predicted protein [Populus trichocarpa]
gi|222868529|gb|EEF05660.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 54/106 (50%)
Query: 129 VVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGS 188
++G + + +++ +++ N ++ L D G++H F+ +++ + + I+ V + +
Sbjct: 117 MIGNPNLRIMRVRAKVGNLTIIPLIDIGSTHYFVPSKMTKRMGIEISAQRFMRVKVVDDT 176
Query: 189 ATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGA 234
++G +Q V + L LG D+++GI WL+ LG+
Sbjct: 177 EINSEGEYADFKFKIQRNHFVSQAIVLPLGGYDVVLGIQWLQELGS 222
>gi|62732706|gb|AAX94825.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550391|gb|ABA93188.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 574
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 60/180 (33%)
Query: 66 LCYKCDEKFSPGHRCRK---------QELQVVLLQEYEAEAQAVEDVGQERELESKPTEG 116
LC+ C+E PGH R + +Q + Y EAQ+ DV
Sbjct: 322 LCFNCNE---PGHMVRTCPKPRRAGLKFVQARVNHVYTEEAQSAPDV------------- 365
Query: 117 AKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLV 169
++G T P +N+ V+L DSGA+H+FIS ++
Sbjct: 366 ------------ILG-TFP--------VNSTPAVILFDSGATHSFISKRFAGAHGLSLVK 404
Query: 170 LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
LK+P+ P G + T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 405 LKIPMRVHTPGGGMTTT-------HYCPLVTVEIQGLIFPANLILLESKDLDVILGMDWL 457
>gi|77552331|gb|ABA95128.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1309
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ P G+ + C
Sbjct: 282 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTP-------GNDMRTAHYC 334
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+++G+ WL
Sbjct: 335 PSVTIEIRRSPFLSNLILLESKDLDVVLGMDWL 367
>gi|147802613|emb|CAN68590.1| hypothetical protein VITISV_029702 [Vitis vinifera]
Length = 1083
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 126 LNSVVGLTSPKT------LKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
LN++ PKT + + + +N K L ++GA+HNF+S + V LKL + E
Sbjct: 101 LNALKAKPVPKTPQSKGLMYVETLVNRKATKALVNTGATHNFVSEDEVKRLKLQASKVE- 159
Query: 180 YGVILRTGSATK-AQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTL 232
G + S TK + G+ RGV + + E D + +++G+ +L+ +
Sbjct: 160 -GCLKAVNSXTKSSHGVARGVAMHIGSWEGRVDVTIALMDDFKMVLGMDFLQKV 212
>gi|321463962|gb|EFX74974.1| hypothetical protein DAPPUDRAFT_108370 [Daphnia pulex]
Length = 665
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 135 PKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQG 194
P + + E +KV L D GA+ N I +V LK+ T T P + +T S A
Sbjct: 359 PAVINVEVENIGEKVSALVDPGATVNSIRRSLVSHLKIEATQTPPLRLADKTASKALAGE 418
Query: 195 ICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLG 233
I + L +G+ FL L+ II+G +W+ +G
Sbjct: 419 IV--LNLCWEGISETVKFLVLEDPSHPIILGTNWMAPVG 455
>gi|208609060|dbj|BAG72152.1| hypothetical protein [Lotus japonicus]
Length = 1369
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 43 PAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLL 90
P + G ++LT+ ELQ GLC+KC +K+ H C + Q++L+
Sbjct: 335 PEKKWNGGQRLTQTELQERSRKGLCFKCGDKWGKEHICSMKNYQLILM 382
>gi|77554563|gb|ABA97359.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 795
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+FIS ++ LK+P+ P
Sbjct: 110 SAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTP------ 163
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
G C + + +QG+ + + L+ D+I+G+ WL
Sbjct: 164 -GGGMTTTHYCPSMTVEIQGLIFPANLILLESKDLDVILGMDWL 206
>gi|108710077|gb|ABF97872.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1299
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFIS-------NEVVLVLKLPITNTEPYGVILRTGSATKAQGIC 196
IN+ V VL DSGASH+FIS N ++ L+ P+ P G I + + C
Sbjct: 324 INSTPVKVLFDSGASHSFISLKASQKHNLALVGLRKPMIVHSPRGEITVSHA-------C 376
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + L+ V + + L D+I+G++WL
Sbjct: 377 IDVPIRLRNVVFPSNLMVLIPKTLDVILGMNWL 409
>gi|156030428|ref|XP_001584544.1| hypothetical protein SS1G_14517 [Sclerotinia sclerotiorum 1980]
gi|154700891|gb|EDO00630.1| hypothetical protein SS1G_14517 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1413
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 142 SEINNKKVVVLTDSGASHNFISNEVV--LVLKLPITNTEPYGVILRTGSATKAQGI---- 195
++IN + + + DSGA+ NFI+ V L ++L T PY + L G G
Sbjct: 489 AKINGRVIRAMIDSGATGNFIAPRTVKHLGVQLQAKRT-PYQLQLVDGQLAGLDGKISQE 547
Query: 196 CRGVGL-ILQGVEIVE-DFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRN 250
R + + I Q E+++ D +P LG II+G+ WLK I+W + ++ F R+
Sbjct: 548 TRPLQMSITQHKEVIQFDVVP--LGNQQIILGMPWLKAHNP-QIDWSSETISFPRRS 601
>gi|147858335|emb|CAN83518.1| hypothetical protein VITISV_035077 [Vitis vinifera]
Length = 1194
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 152 LTDSGASHNFISNEVVLVLKLPITNTE-PYGVILRTGSATKAQGICRGVGLILQGVEIVE 210
L D G++H+F+S +L + I N + V + G + I R +++ E+
Sbjct: 216 LIDPGSTHSFVSVSFAGLLGMSIDNMDFDLFVAIPLGDSVVVNKILRDCIVMIGYREMTV 275
Query: 211 DFLPLDLGITDIIMGIHWLKTLGAT 235
D + LDL D+I+G++WL + A+
Sbjct: 276 DLVLLDLQDFDVILGMNWLASYHAS 300
>gi|222615969|gb|EEE52101.1| hypothetical protein OsJ_33892 [Oryza sativa Japonica Group]
Length = 271
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 113 PTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKL 172
P + +++ +S +V+G S + ++L I +V++L DSG+SH+FIS ++V L+
Sbjct: 165 PGDSEDGELLAISKEAVLGTESSRIVRLQGLIERHEVLMLVDSGSSHSFISEQLVHRLQG 224
Query: 173 PITNTEPYGVILRTG 187
++ P V + G
Sbjct: 225 VCSSVTPLKVKIADG 239
>gi|358343690|ref|XP_003635931.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355501866|gb|AES83069.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 558
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQG------ICRGVGLI 202
++ + D+GA+H FI+ + L L I++ V+ T A+G +C L
Sbjct: 366 LIAIIDTGATHCFIAVDCAYKLGLVISDMNGEMVV-----ETPAKGSLTTSLVCLSCPLS 420
Query: 203 LQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNT 248
+ G + D + L L D+I G++WL+ HIN + ++ F++
Sbjct: 421 MFGRDFEVDLVCLPLTGMDVIFGMNWLEN-NRVHINCFSKTIHFSS 465
>gi|224102399|ref|XP_002312663.1| predicted protein [Populus trichocarpa]
gi|222852483|gb|EEE90030.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 151 VLTDSGASHNFISNEVVLVL-KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIV 209
VL D+GA+H+F+S+ L K PI P V + + + + + +QG ++
Sbjct: 450 VLFDTGATHSFVSSYFALRFTKQPILLESPLCVAIPSDEVMFGEYVYVDCEVQVQGRNLL 509
Query: 210 EDFLPLDLGITDIIMGIHWLKTLGATHINW 239
D + L++ D+I+G+ WL A+ W
Sbjct: 510 GDLVILEIVGFDVILGMDWLSRHHASVDCW 539
>gi|147772919|emb|CAN64786.1| hypothetical protein VITISV_014071 [Vitis vinifera]
Length = 1217
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 126 LNSVVGLTSPKT------LKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEP 179
LN++ PKT + + + +N K L D+GA+HNF+S + L+L +
Sbjct: 117 LNALKAKPIPKTPQSKGLMYVEAIVNGKATKALVDTGATHNFVSEDEARRLELQASKE-- 174
Query: 180 YGVILRT--GSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHI 237
G L+ +A + G+ RGV + + E DF + +++G+ +L+ + A +
Sbjct: 175 -GGWLKAVNSTAKPSHGVARGVTMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVKAVPL 233
Query: 238 NWKTHSMKF 246
+ SM F
Sbjct: 234 PF-LRSMAF 241
>gi|38346425|emb|CAD40212.2| OSJNBa0019J05.10 [Oryza sativa Japonica Group]
Length = 1525
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ V+L DSGA+H+ IS ++ LK+P+ P G +
Sbjct: 397 SAPEVILGTFPVNSTPAVILFDSGATHSLISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 456
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 457 T-------HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWL 493
>gi|77551789|gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1710
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFIS-------NEVVLVLKLPITNTEPYGVILRTGSATKAQGIC 196
IN+ V VL DSGASH+FIS N ++ L+ P+ P G I + + C
Sbjct: 750 INSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSPGGEITMSHA-------C 802
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + L+ V + + L D+I+G+ WL
Sbjct: 803 IDVPIRLRDVVFPSNLMVLIPQTLDVILGMDWL 835
>gi|108863004|gb|ABG22100.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1620
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN+ V VL DSGASH+FIS E L + ++ G C + + L
Sbjct: 579 INSSPVKVLFDSGASHSFISLEASQKHNLTLVGLRKPMIVHSPGGEITVSHACINIPIRL 638
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V + + + D+I+G+ WL
Sbjct: 639 RDVVFPSNLIVVIPQTLDVILGMDWL 664
>gi|21741860|emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]
Length = 1470
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN+ V VL DSGASH+FIS + L + ++ G C V + L
Sbjct: 372 INSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSPGGEITVSHACIDVPIRL 431
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V + + L D+I+G+ WL
Sbjct: 432 RDVVFPSNLMVLIPQTLDVILGMDWL 457
>gi|357516397|ref|XP_003628487.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355522509|gb|AET02963.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 544
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 42 YPAHEGRGFRKLTEAELQSNQECG---LCYKCDEKFSPGHRCRKQELQVV-------LLQ 91
Y A +G ++L + + ++ +CYKC +K + C K E + L
Sbjct: 215 YSAPADKGKQRLNDERRPNRRDAPAEIVCYKCGDKGHKSNVCTKDEKKCFRCGQKGHTLA 274
Query: 92 EYEAEAQAVEDVGQERELESKPTEGAKNQVVEVSLNSVVGLTSPKT------LKLASEIN 145
+ + + +E + S+ T+ K + + V LT +T ++ N
Sbjct: 275 DCKRGDVVCYNYNEEGHISSQCTQPKKVR----TGGKVFALTGTQTTNEDRLIRGTCFFN 330
Query: 146 NKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQG------ICRGV 199
+ ++ + D+GA+H FI+ E L L ++ + V+ T A+G +C
Sbjct: 331 STPLIAIIDTGATHCFIAIECAYKLGLVLSYMKGEMVV-----ETPAKGLVTTSLVCLRC 385
Query: 200 GLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKF 246
L + G + D + L L ++I G++WL+ HIN + ++ F
Sbjct: 386 PLSMFGRDFEVDLVCLPLTGMNVIFGMNWLE-YNRVHINCFSKTVHF 431
>gi|32488367|emb|CAE02926.1| OSJNBb0108J11.19 [Oryza sativa Japonica Group]
gi|32489278|emb|CAE04619.1| OSJNBa0028I23.1 [Oryza sativa Japonica Group]
Length = 1516
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ VL DSGASH+FIS V+ LK+P+ + G+ + C
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQ-------VHTLGNDMRTAHYC 451
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + ++ + + + L+ D+I+G+ WL
Sbjct: 452 PSVTIEIKRSPFLSNLILLESKDLDVILGMDWL 484
>gi|116310820|emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]
Length = 1470
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN+ V VL DSGASH+FIS + L + ++ G C V + L
Sbjct: 372 INSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSPGGEITVSHACIDVPIRL 431
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V + + L D+I+G+ WL
Sbjct: 432 RDVVFPSNLMVLIPQTLDVILGMDWL 457
>gi|320031518|gb|EFW13480.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|320039325|gb|EFW21259.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 802
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%)
Query: 136 KTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGI 195
++L IN ++++ L D+G+ N +S + +L LP+ N ++++TG
Sbjct: 651 RSLYAPVTINQQELMALIDTGSEINLLSRKYAEMLNLPMENKPRVTMVVQTGEVAPFYAF 710
Query: 196 CRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
C V + + + FL + G +I+G W
Sbjct: 711 CDEVPVQIGDIVTHTPFLIFEGGDQQLILGRPW 743
>gi|34015248|gb|AAQ56440.1| putative polyprotein [Oryza sativa Japonica Group]
gi|34015300|gb|AAQ56491.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1222
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ VL DSGASH+FIS + L + + + G+ C V + +
Sbjct: 215 VNSFPATVLFDSGASHSFISKRIAGTHGLSVVELKILMRVHTPGNDMNTTHYCPSVTIEI 274
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ + + + L+ D+I+G+ WL
Sbjct: 275 KRSPFLSNLILLESKDLDVILGMDWL 300
>gi|77555413|gb|ABA98209.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 911
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
+P+ + +N+ VL DSGAS++FIS + V+ LK+P+ P
Sbjct: 237 AAPEVMLGTFPVNSHPATVLFDSGASYSFISKKFAGTHGLSVVELKIPMRVHTP------ 290
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
G C + + ++ + + + + L+ D+I+G+ WL
Sbjct: 291 -GDDMNTAHYCPSMSIEIKRSQFLSNLILLESKDLDVILGMDWL 333
>gi|297609080|ref|NP_001062636.2| Os09g0135100 [Oryza sativa Japonica Group]
gi|255678697|dbj|BAF24550.2| Os09g0135100 [Oryza sativa Japonica Group]
Length = 404
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVED--VGQERELESKPTEGAKNQVV 122
GLC+KC +K++P H C KQE + E E ++ + D + LE++P + +
Sbjct: 220 GLCFKCGDKYAPRHVCAKQEGPQLKAMEVEQNSEMLTDEMLDVVACLETQP------ENM 273
Query: 123 EVSLNSVVGLTSPKTLKL 140
+S+ ++ G +PKT++L
Sbjct: 274 LLSIQAISGSVAPKTIQL 291
>gi|238578483|ref|XP_002388733.1| hypothetical protein MPER_12217 [Moniliophthora perniciosa FA553]
gi|215450283|gb|EEB89663.1| hypothetical protein MPER_12217 [Moniliophthora perniciosa FA553]
Length = 319
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 25/220 (11%)
Query: 52 KLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQ---VVLLQEYEAEAQA-----VEDV 103
+L+E+E Q + GLC+ C + GHR R L+ +QE + + A + +
Sbjct: 61 RLSESERQDYMKRGLCFYCSK---TGHRVRDCPLKGGSSAPVQERKKFSAAETFAKIRAL 117
Query: 104 GQERELESKPTE-GAKNQVVEVSLNSVVGLTSPKTLKLASEINNK--KVVVLTDSGASHN 160
E ELE K G Q + NS+ L L +I NK ++ L +SGA
Sbjct: 118 TAEMELEEKDKMLGLIEQSATLERNSI-------HLSLTYKIGNKNAEIKALINSGAGGR 170
Query: 161 FISNEVVLVL-KLPITNTEPYGVILRTGSATKAQGICRGVGLILQG--VEIVEDFLPLDL 217
F+S + L K +P V G+ K I V E+F+ L
Sbjct: 171 FVSPDFAKTLGKRWNKLRKPIKVYNVDGTPNKTAMITHSVLFEYSSGTKTFCEEFMISGL 230
Query: 218 GITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQF 257
+I+G+ WL+ +I+W T + F I +F
Sbjct: 231 EKEKLILGLPWLQNHNP-NIDWVTREVAFRPNRKIQIKKF 269
>gi|147835239|emb|CAN67792.1| hypothetical protein VITISV_001313 [Vitis vinifera]
Length = 1414
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 134 SPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATK-A 192
S + + + + +N K L D+GA+HNF++ + L+L + G + SA K +
Sbjct: 432 SKRLMYVEALVNGKATKALVDTGATHNFVAEDEARRLELQASKEG--GWLKAVNSAAKPS 489
Query: 193 QGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGA 234
G+ RGV + + E DF + +++G+ +L+ + A
Sbjct: 490 HGVARGVSMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVKA 531
>gi|3668095|gb|AAC61827.1| hypothetical protein [Arabidopsis thaliana]
Length = 242
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 207 EIVEDFLPLDLGIT--DIIMGIHWLKTLGATHINWKTHSMKFN 247
EI EDFL LDL T D+I+G WL LG T W+ H+ F+
Sbjct: 15 EITEDFLLLDLTETEADVILGYSWLSKLGET---WQDHTFAFS 54
>gi|38344099|emb|CAD39395.2| OSJNBb0089K24.5 [Oryza sativa Japonica Group]
Length = 1365
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 156 GASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPL 215
GA+H+FIS + V ++ + + +I GS A+ V + +QGV + + + L
Sbjct: 353 GATHSFISRDFVAKHQIRVEDLSKPMIISTPGSQLPAKLFSPSVTIEIQGVTFLANLILL 412
Query: 216 DLGITDIIMGIHWL 229
D+I+G++WL
Sbjct: 413 SSKNLDVILGMNWL 426
>gi|62734156|gb|AAX96265.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550571|gb|ABA93368.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +N+ +L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 371 SAPEVILGTFPVNSTPAKILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 430
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C + + +QG+ + + L+ D+I+G+ WL
Sbjct: 431 T-------HYCPSMTVEIQGLIFPANLILLESKDLDVILGMDWL 467
>gi|38345527|emb|CAD41297.2| OSJNBa0020J04.2 [Oryza sativa Japonica Group]
Length = 1537
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN+ V VL DSGASH+FIS + L + ++ G C V + L
Sbjct: 307 INSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSPGGEITVSHACIDVPIRL 366
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V + + L D+I+G+ WL
Sbjct: 367 RDVVFPSNLMILIPQTLDVILGMDWL 392
>gi|357503811|ref|XP_003622194.1| Cellular nucleic acid-binding protein-like protein, partial
[Medicago truncatula]
gi|355497209|gb|AES78412.1| Cellular nucleic acid-binding protein-like protein, partial
[Medicago truncatula]
Length = 509
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQG------ICR 197
++ +VV+ D+GA+H FI+ + + L L ++N V+ T+A+G +C
Sbjct: 362 FDSTPLVVIIDTGATHCFIAIDCAIKLGLAMSNINGEMVV-----ETQAKGFVTTSLVCS 416
Query: 198 GVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNT 248
L + + D + L D+I ++WL+ HIN+ + S+ F++
Sbjct: 417 RCPLSMFDHDFEIDLVCLPFSGMDVIPSMNWLE-YNHVHINFFSKSVYFSS 466
>gi|224154118|ref|XP_002337435.1| predicted protein [Populus trichocarpa]
gi|222839253|gb|EEE77604.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 53 LTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESK 112
L E + + G C+KC +KF PGH+C +EL ++ E E + ER+L K
Sbjct: 231 LIETMHEQRRRLGQCFKCGDKFMPGHKCNVKELHMIEGNEEEGRVKVYPVAILERKLIKK 290
>gi|255561864|ref|XP_002521941.1| conserved hypothetical protein [Ricinus communis]
gi|223538866|gb|EEF40465.1| conserved hypothetical protein [Ricinus communis]
Length = 51
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 122 VEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNF 161
+E+S++++ G S +LK+ E+N K +V+L D G++H F
Sbjct: 8 MEISMHAIEGRESANSLKIQGEVNGKTIVILVDGGSTHTF 47
>gi|41469587|gb|AAS07330.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108710255|gb|ABF98050.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1294
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 33/181 (18%)
Query: 56 AELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTE 115
A+ + + G+C+ C E +C K V+ ++ + A A
Sbjct: 260 AKREQGNKLGVCFNCGEPCHYFDKCPKPRRVKVVPEQNNSTASAT--------------- 304
Query: 116 GAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VL 168
K +V V+ G +P + +N+ VL DSGA+H+F+S V
Sbjct: 305 --KARVNHVAAAEAQG--APDVILGTFPVNSVPATVLFDSGATHSFLSMSFAGNHGMEVE 360
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
L+ P+ + P L + + V + +QGV + + + L+ D+I+G+ W
Sbjct: 361 DLRRPLMVSTPSNQALSSQRSP-------SVRIEIQGVPFLANLILLESKDLDVILGMDW 413
Query: 229 L 229
L
Sbjct: 414 L 414
>gi|296090255|emb|CBI40074.3| unnamed protein product [Vitis vinifera]
Length = 206
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 50 FRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAV 100
++++ ++Q + LCY CDE++ P H+ +++ Q+ LL +E++ +A+
Sbjct: 94 IKRISATKIQDRWDKSLCYYCDERYEPSHKYKRK--QIFLLDGHESKVEAI 142
>gi|156047683|ref|XP_001589809.1| hypothetical protein SS1G_09531 [Sclerotinia sclerotiorum 1980]
gi|154693926|gb|EDN93664.1| hypothetical protein SS1G_09531 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 960
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 119 NQVVEVSLNSVVG------LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKL 172
+Q+ ++ N V+G + ++I + + + DSGA+ NFI+ + L +
Sbjct: 442 DQIDQIDHNKVLGQGQLNIAGQAGQIYWVAKIKGQIIRAMIDSGATGNFIAPKTAKYLGV 501
Query: 173 PI-TNTEPYGVILRTGSATKAQGI----CRGVGLIL-QGVEIVE-DFLPLDLGITDIIMG 225
+ T PY + L G G R V +I+ Q EI++ D +PL G II+G
Sbjct: 502 QLQTKQTPYQLQLVDGQLAGLDGKISQETRSVQMIIDQHKEIIQFDVVPL--GNQSIILG 559
Query: 226 IHWLKTLGATHINWKTHSMKFNTRN 250
+ WLK I+W ++ F ++
Sbjct: 560 MPWLKAHN-LQIDWLWETVTFPNKS 583
>gi|288819264|gb|ADC55379.1| gag-pol polyprotein [Oryza brachyantha]
Length = 1393
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 120 QVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITN 176
+ V+ +N V +P+ + +N+ +L DSGA+H+FIS + V +L L
Sbjct: 370 RFVQARVNHVTAEEAQAAPEVILGTFPVNSVPATILFDSGATHSFISRKFVGMLGLKREK 429
Query: 177 TEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+ G + + V + +QG + + + L+ D+I+G+ WL
Sbjct: 430 LRDPMRVNTPGHSMFSDLYSPVVPIEIQGTPFLANLILLESKDLDVILGMDWL 482
>gi|320031415|gb|EFW13381.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 827
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 137 TLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+L + IN ++++VL ++G+ N +S + +LKLP+ N +I++TG T C
Sbjct: 257 SLYVPVTINQQELMVLINTGSEINLLSQKYAEMLKLPMENKLQVTMIVQTGEVTSFYTFC 316
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
V + + + FL G +I+ W
Sbjct: 317 DEVPVQIGDIVTHTPFLIFKRGDQQLILERPW 348
>gi|147791940|emb|CAN72445.1| hypothetical protein VITISV_026551 [Vitis vinifera]
Length = 721
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 31 GGFNSDRIVQVYPAHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRK 82
G + ++ P H KL+ +LQ ++ GLCY CDEK+ GH+ +K
Sbjct: 222 SGAKDTNLERILPIH------KLSPTKLQRRRQQGLCYNCDEKYXMGHKXKK 267
>gi|108708178|gb|ABF95973.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 577
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (20%)
Query: 44 AHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAV 100
A G+G R ++Q Q LC+ C F PGH +C KQ Q + QA
Sbjct: 405 AQSGQGRR-----DVQGPQR--LCFNC---FEPGHFADKCPKQRRQ---------QGQA- 444
Query: 101 EDVGQERELESKPTEGAKNQVVEVSLNSVVG---LTSPKTLKLASEINNKKVVVLTDSGA 157
+ G K+ V+ +N V LT+P + I++ +L DSGA
Sbjct: 445 ---------PPRSNNGGKD-VIRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGA 494
Query: 158 SHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDF 212
SH+FIS V +L + +I G A+ V + +QG+ D
Sbjct: 495 SHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDL 549
>gi|359372825|gb|AEV42258.1| hypothetical protein [Beta vulgaris]
Length = 1553
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN+ V VL DSGAS +FI++ V L L + + +++ +G V L +
Sbjct: 401 INSTPVKVLFDSGASLSFIAHATVRNLTLVESESISMPIVIPSGETVNCSKRFLKVPLKI 460
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
D + +L DII+G+ WL
Sbjct: 461 GEGYFPSDLIEFNLSNLDIILGMDWL 486
>gi|147842289|emb|CAN65064.1| hypothetical protein VITISV_008583 [Vitis vinifera]
Length = 1126
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKT------LKLASEINNKKVVVLTDSGASHNFI 162
+E K EG LNS+ PKT + + + +N K L DSGA+HNF+
Sbjct: 342 IEEKEKEGDAQMGSLQLLNSLKAKLMPKTPQRKWLMYVEALVNGKTTKALVDSGATHNFV 401
Query: 163 SNEVVLVLKLPITNTEPYGVILRTGSATK-AQGICRGVGL 201
S + L+L + E G + SA K + + RGV +
Sbjct: 402 SEDEAKRLELQASKEE--GWLKTVNSAAKPSHRVARGVAM 439
>gi|34015139|gb|AAQ56336.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 674
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKNQVVEV 124
GLCY C EK+SP H+C +Q+ +QE A A + E+EL EG++ ++ +
Sbjct: 327 GLCYLCAEKWSPTHKCSGI-VQLQAVQELFAMFSADQP---EQELSESDGEGSQT-LMAI 381
Query: 125 SLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVIL 184
SL ++ G + + L++P+ V +
Sbjct: 382 SLQAIQGTVA-------------------------------GIQPLRVPLQ------VRV 404
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW--KTH 242
GS + + +QG F L L D+I+G+ WL+ I+W KT
Sbjct: 405 ANGSILQCESELPNAKWEVQGNTFHTTFKVLPLNNYDVILGMDWLEQHSPMDIDWQKKTL 464
Query: 243 SMKFN 247
S++ N
Sbjct: 465 SLQGN 469
>gi|301627047|ref|XP_002942691.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Xenopus (Silurana) tropicalis]
Length = 1515
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 137 TLKLASEINNKK--VVVLTDSGASHNFISNEVVLVLKLPI-TNTEPYGVILRTGS-ATKA 192
TL L+ + + KK V + DSGA FI + V L +P+ + ++P+ + L GS +T
Sbjct: 337 TLSLSLQFHEKKTNVTAIIDSGACSCFIDKDFVKGLLIPLRSKSQPWSIKLADGSTSTSG 396
Query: 193 QGICRGVGLILQGVEIVEDFLPLDL---GITDIIMGIHWLKTLGATHINWKT 241
C V L + +++ D+ + +I+G+ WL INW +
Sbjct: 397 PVTCETVPLRVISASGHAEYIVFDVISSPLFPVILGLSWLSKHNP-EINWTS 447
>gi|15217229|gb|AAK92573.1|AC074354_7 Putative retroelement [Oryza sativa Japonica Group]
Length = 439
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 151 VLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVE 210
L D GAS + I +V L + P + L S GI V + ++ I
Sbjct: 226 ALCDLGASVSVIPKDVFDKLNFTVLAPTPMCLQLADSSVRYPAGIAEDVPVKIRDFFIPV 285
Query: 211 DFLPLDLGI---TDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQF 257
DF+ LD+ T +I+G +L T GA +IN +T S++F+ K +F
Sbjct: 286 DFVVLDMDRGKETPLILGRPFLSTAGA-NINVETGSIRFHINGKEEKFEF 334
>gi|38347241|emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group]
Length = 1466
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLPITNTEPYGVILR 185
++P+ + +++ +L DSGA+H+FIS ++ LK+P+ P G +
Sbjct: 434 SAPEVILGTFPVDSTPAKILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTT 493
Query: 186 TGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
T C V + +QG+ + + L+ D+I+G+ WL
Sbjct: 494 T-------HYCPSVTVEIQGMIFPANLILLESKDLDVILGMDWL 530
>gi|38347555|emb|CAD39386.2| OSJNBb0016B03.11 [Oryza sativa Japonica Group]
Length = 1374
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 120 QVVEVSLNSVVGLTSPKTLKLASE--------------INNKKVVVLTDSGASHNFISNE 165
+VV V NS V ++ + +A+ +N+ VL DSGA+H+F+ N
Sbjct: 334 KVVPVQSNSAVPVSKARVNHVAAAEAQDAPDVILGTFPVNSVPATVLFDSGATHSFLLNH 393
Query: 166 VVLV--LKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDII 223
+ V L+ P+ + P L + V + +QGV + + + L+ D+I
Sbjct: 394 GMEVEDLRRPLMVSTPSNQALSLQRSP-------SVRIEIQGVPFLANLILLESKDLDVI 446
Query: 224 MGIHWL 229
+G+ WL
Sbjct: 447 LGMDWL 452
>gi|353238834|emb|CCA70767.1| related to TY3B-TY3B protein [Piriformospora indica DSM 11827]
Length = 2540
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 94 EAEAQA---VEDVGQERELESKPTEGAKNQVVEVSLNSVVGLT--SPKTLKLASEINNKK 148
E+E QA V G+ + +P ++E + + +PK L IN
Sbjct: 1070 ESENQAHLRVHMTGEVKSRRGRPARQGNGTLIERNAAKTRDIERCTPKPCVLDGFINGNP 1129
Query: 149 VVVLTDSGASHNFISNEVVLVLKLPITNTE-PYGVILRT-GSATKAQGICRGVGLILQGV 206
V +L DSG+ +FIS +V LK+P N E P V L GS K I + LQ
Sbjct: 1130 VRMLVDSGSMADFISTTLVDQLKIPYDNLEVPLSVQLAVRGSRGK---INATATVKLQYE 1186
Query: 207 EIVED--FLPLDLGITDIIMGIHWL 229
EI E F +++ DII+G +L
Sbjct: 1187 EISESRRFDVMNIDSYDIILGTPFL 1211
>gi|147826806|emb|CAN63950.1| hypothetical protein VITISV_032357 [Vitis vinifera]
Length = 1545
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATK-AQGICRGVGLI 202
+N K L D+GA+HNF+S + L+L + G + SA K + G+ RGV +
Sbjct: 437 VNGKATKALVDTGATHNFVSEDEARRLELQASKEG--GWLKAVNSAAKPSHGVARGVTMH 494
Query: 203 LQGVEIVEDFLPLDLGITDIIMGIHWLKTLGA 234
+ E DF + +++G+ +L+ + A
Sbjct: 495 IGLWEGRVDFTVAPMDDFKMVLGMDFLQKVKA 526
>gi|258644592|dbj|BAI39843.1| hypothetical protein [Oryza sativa Indica Group]
Length = 483
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 151 VLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVE 210
L D GAS N + +V L + P + L S GI V + ++ I
Sbjct: 357 ALCDLGASVNIMPKDVFDKLNFTVLAPTPMRLQLADSSVRYPAGIADDVPVKIRDFFIPV 416
Query: 211 DFLPLDLGI---TDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQF 257
DF+ LD+ T +I+G +L T GA +I+ +T S++F+ K +F
Sbjct: 417 DFVVLDMDTGKETPLILGRPFLSTAGA-NIDVRTGSIRFHINGKEEKFEF 465
>gi|19881768|gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1449
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ VL DSGA+H+F+S + + + ++ G+ + C V + +
Sbjct: 346 VNSIPATVLFDSGATHSFLSKSFATKHGMEVVSLGRPLLVNTPGNQVFSTRYCPSVTIEI 405
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+GV + L+ D+I+G+ WL
Sbjct: 406 EGVPFPSSLILLESKDLDVILGMDWL 431
>gi|357470885|ref|XP_003605727.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355506782|gb|AES87924.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 458
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 42 YPAHEGRGFRKLTEAELQSNQECG---LCYKCDEKFSPGHRCRKQELQVV-------LLQ 91
Y A +G ++L + ++ +C+KC EK + C +++ + L
Sbjct: 200 YSAPADKGKQRLNDERRPKRRDAPTDIVCFKCGEKGHKSNVCDREKKKCFRCGQKGHTLA 259
Query: 92 EYEAEAQAVEDVGQERELESKPTEGAKNQV--VEVSLNSVVGLTSPKTLKLASEINNKKV 149
+ + + +E + S+ T+ K + +LN + + ++ N+ +
Sbjct: 260 DCKHGDVVCYNCNEEGHISSQCTQPKKVRTGGKVFALNGTQTVNEDRLIRGTCFFNSTPL 319
Query: 150 VVLTDSGASHNFISNEVVLVLKLPITNTEPYGVI--LRTGSATKAQGICRGVGLILQGVE 207
+ + D+ A H FI+ + L L +++ + V+ GS T + +C L + G
Sbjct: 320 IAIIDTSALHYFIAVDCAYKLGLVVSDMKGEMVVETPAKGSLTTSL-VCLSCPLSMFGGG 378
Query: 208 IVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQFF 258
D + L L +I G++WL+ HIN + ++ F++ + +F
Sbjct: 379 FEVDLVCLPLTGMHVIFGMNWLE-YNRVHINCFSKTVHFSSAKEVSGAEFL 428
>gi|110288688|gb|ABB46921.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1068
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ VL DSGA+H+F+S + + + ++ G+ + C V + +
Sbjct: 604 VNSIPATVLFDSGATHSFLSKSFATKHGMEVVSLGRPLLVNTPGNQVFSTRYCPSVTIEI 663
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+GV + L+ D+I+G+ WL
Sbjct: 664 EGVPFPSSLILLESKDLDVILGMDWL 689
>gi|384490036|gb|EIE81258.1| hypothetical protein RO3G_05963 [Rhizopus delemar RA 99-880]
Length = 1639
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 34/151 (22%)
Query: 26 FLCTWGGFNSDRIVQVYPAHEGRGFRKL-TEAELQSNQECGLCYKCDEKFSPGHRCRKQE 84
F C+ G N H + L AE + ++ CYKC + + GH C+K E
Sbjct: 377 FFCSHHGKNG--------THNSKDCYSLKNRAEKNTEKKENNCYKCHQPWFKGHVCKKDE 428
Query: 85 LQVVL------------LQEYEAEAQA-VEDVGQERELESKPTEGAKNQVVEVSLNSVVG 131
+ VL + + AE +A +ED+ + + SK A N NS
Sbjct: 429 PRRVLAVSKVEKQEESQIDKATAEVEAMMEDLSYDCKYPSKNKNKACND------NSAFN 482
Query: 132 LTSPKTLKLASEINNKKVVVLTDSGASHNFI 162
L +P I N K++ L D+G+ +FI
Sbjct: 483 LLTPIF------IENTKLIGLIDTGSDASFI 507
>gi|110289210|gb|ABG66123.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1291
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ VL DSGA+H+FIS + V + L + G+++ + V + +
Sbjct: 387 VNSVPATVLFDSGATHSFISKKFVGMYGLRKKELSTPMKVHTPGNSSTSVSYSPSVLIEI 446
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
Q + +F+ L+ D+I+G+ WL I++ H++
Sbjct: 447 QRSPFLANFILLESKDLDVILGMDWLTKFKGV-IDYANHTV 486
>gi|1945323|emb|CAA97115.1| TY3B [Saccharomyces cerevisiae]
gi|1945324|emb|CAA97117.1| TY3B [Saccharomyces cerevisiae]
Length = 1547
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 60 SNQEC---GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEG 116
S +EC LC+ C ++ GHR L E A + + D+ E + + P
Sbjct: 257 SREECIKNRLCFYCKKE---GHR----------LNECRARKRVLTDLELESKDQQTPFIK 303
Query: 117 AKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITN 176
V +++ + T+ KT+K I N KV L DSG+ +FI ++V +LK I
Sbjct: 304 TLPIVHYIAIPEMDN-TAEKTIK----IQNTKVKTLFDSGSPTSFIRRDIVELLKYEIYE 358
Query: 177 TEPYGVILRTGSATKAQGICRGVGLILQ 204
T P + R ATK+ V + L+
Sbjct: 359 TPP--LRFRGFVATKSAVTSEAVTIDLK 384
>gi|336382820|gb|EGO23970.1| hypothetical protein SERLADRAFT_439277 [Serpula lacrymans var.
lacrymans S7.9]
Length = 250
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 29 TWGGFNSDRIVQVYPAHEGRG----FRKLTEAELQSNQECGLCYKCDEKFSPGHRCR--- 81
TWG N +R Y + G ++LT+ E ++ ++ G C+ C+EK G CR
Sbjct: 102 TWGARNKER---QYNKNRKSGPSTSVKRLTKDEEETRRKEGRCFICNEKGHIGRNCRNKG 158
Query: 82 KQELQVVLLQEYEAEAQAV--EDVGQE-----REL-ESKPTEGAKNQVVEVSLNSVVGLT 133
K + V E E + + V ED Q REL E + E K E ++N+
Sbjct: 159 KTPERKVRQTETEDDVKTVVEEDRVQNIMRMWRELGEDQKAEAMKELEDEATINA----- 213
Query: 134 SPKTLKLASEINNKKV--VVLTDSGASHNFISNEVVL 168
+L++ + K + L DSGA+ +F+ + +
Sbjct: 214 --NSLRIDCSLKQKTIGTKALIDSGATDDFMDTKFAI 248
>gi|326678732|ref|XP_003201155.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1347
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 134 SPKTLKLASEINNKKVV----VLTDSGASHNFISNEVVLVLKLPITNTE-PYGVILRTG- 187
SP T L ++ ++ L DSGA NFI +++ LK+P+ P V +G
Sbjct: 339 SPNTTMLPVNLSFNSIMHHCHALIDSGAEGNFIDSKLAYSLKIPVVPLSLPIAVHALSGL 398
Query: 188 SATKAQGICRGVGLILQG--VEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
S + LI G E +E FL + T +I+G WL L HINW
Sbjct: 399 SLPTITHSTAPIRLITSGNHSETIEFFLTETIA-TPVILGHPWL-VLHKPHINW 450
>gi|238594758|ref|XP_002393573.1| hypothetical protein MPER_06672 [Moniliophthora perniciosa FA553]
gi|215461257|gb|EEB94503.1| hypothetical protein MPER_06672 [Moniliophthora perniciosa FA553]
Length = 217
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 52 KLTEAELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELES 111
+L+E+E Q + GLC+ C + GHR RK+ A A E + R L
Sbjct: 61 RLSESERQDYMKKGLCFYCSK---TGHRERKK-----------PSASAAETFAKIRALTG 106
Query: 112 KPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNK--KVVVLTDSGASHNFISNEVVLV 169
+ K++++ + S + L L +I NK ++ L DSGA FIS +
Sbjct: 107 EMELDEKDKMIGLIEQSATLERNSIHLSLMYKIGNKNAEIKALIDSGAGGRFISPDFAKT 166
Query: 170 L 170
L
Sbjct: 167 L 167
>gi|22758322|gb|AAN05526.1| polyprotein [Oryza sativa Japonica Group]
Length = 1471
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ VL DSGA+H+FIS + V + L + G+++ + V + +
Sbjct: 567 VNSVPATVLFDSGATHSFISKKFVGMYGLRKKELSTPMKVHTPGNSSTSVSYSPSVLIEI 626
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
Q + +F+ L+ D+I+G+ WL I++ H++
Sbjct: 627 QRSPFLANFILLESKDLDVILGMDWLTKFKGV-IDYANHTV 666
>gi|6321547|ref|NP_011624.1| gag-pol fusion protein [Saccharomyces cerevisiae S288c]
gi|285812302|tpg|DAA08202.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288c]
Length = 1547
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 60 SNQEC---GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEG 116
S +EC LC+ C ++ GHR L E A + + D+ E + + P
Sbjct: 257 SREECIKNRLCFYCKKE---GHR----------LNECRARRRVLTDLELESKDQQTPFIK 303
Query: 117 AKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITN 176
V +++ + T+ KT+K I N KV L DSG+ +FI ++V +LK I
Sbjct: 304 TLPIVHYIAIPEMDN-TAEKTIK----IQNTKVKTLFDSGSPTSFIRRDIVELLKYEIYE 358
Query: 177 TEPYGVILRTGSATKAQGICRGVGLILQ 204
T P + R ATK+ V + L+
Sbjct: 359 TPP--LRFRGFVATKSAVTSEAVTIDLK 384
>gi|91176523|gb|ABE26651.1| pol polyprotein [Nosema bombycis]
Length = 1022
Score = 38.5 bits (88), Expect = 2.9, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 16/143 (11%)
Query: 107 RELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
++ ++ E +KN ++ +N PK ++ +N + DSG++ NFI E
Sbjct: 48 KKKRAETEEPSKNLLITEKINR------PKKTAISGTVNGQMKEFTIDSGSAKNFIKRET 101
Query: 167 VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGV--EIVEDFLPLDLGITDIIM 224
V L +PI P + + G + + + ++ EI E+F LD +I++
Sbjct: 102 VEELGIPIKEVNPLKMTVANGQVSTTDKMAT-INILFDTCENEIQENFFILDDLPEEILI 160
Query: 225 GIHWLKTLGATH---INWKTHSM 244
G +L H I++K H++
Sbjct: 161 GNEFL----INHELIIDYKNHAL 179
>gi|326663810|ref|XP_003197666.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1416
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 134 SPKTLKLASEINNKKVV----VLTDSGASHNFISNEVVLVLKLPITNTE-PYGVILRTG- 187
SP T L ++ ++ L DSGA NFI +++ LK+P+ P V +G
Sbjct: 415 SPNTTMLPVNLSFNSIMHHCHALIDSGAEGNFIDSKLAYSLKIPVVPLSLPIAVHALSGL 474
Query: 188 SATKAQGICRGVGLILQG--VEIVEDFLPLDLGITDIIMGIHWLKTLGATHINW 239
S + LI G E +E FL + T +I+G WL L HINW
Sbjct: 475 SLPTITHSTAPIRLITSGNHSETIEFFLTETIA-TPVILGHPWL-VLHKPHINW 526
>gi|242794540|ref|XP_002482396.1| retrovirus polyprotein, putative [Talaromyces stipitatus ATCC
10500]
gi|218718984|gb|EED18404.1| retrovirus polyprotein, putative [Talaromyces stipitatus ATCC
10500]
Length = 468
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 136 KTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGI 195
KT+ + ++I K + +L DSG + N++S + V + K+P+ T+ + I+ T +G
Sbjct: 13 KTITILAKIQGKGIRILLDSGVTGNYMSQKFVHLNKIPVKTTDEWTKIVGIDGETITEGY 72
Query: 196 CRGVGLILQ-----GVEIVEDFLPLDLGITDIIMGIHW 228
+ IL I + +P+D + + I W
Sbjct: 73 KKKTSGILMRSGKYATTITFNIVPMDTQYYNANLIIDW 110
>gi|449691645|ref|XP_004212749.1| PREDICTED: uncharacterized protein LOC101234817 [Hydra
magnipapillata]
Length = 1194
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 129 VVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGS 188
+ + SP L + IN L D+G+ F ++E++ LP N V L
Sbjct: 235 IAAINSPDRL-INVTINKNITQALIDTGSDKTFTTSELLQHWNLPYDNQSTSKVSLADNL 293
Query: 189 ATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWK 240
K +GI +G L+L ++ FL +D + +I+G+ L + IN+K
Sbjct: 294 TLKVKGIFQG-SLLLACEKLKVQFLVVDNLVAQVIIGMDVLTQHTSITINFK 344
>gi|147782281|emb|CAN71911.1| hypothetical protein VITISV_018683 [Vitis vinifera]
Length = 368
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATK-AQGICRGVGLI 202
+N K L D+GA+HNF+S + +L+L ++ G + S K + G+ RGV +
Sbjct: 284 MNGKATKALVDTGATHNFVSEDEARMLELQA--SKEGGWLKAVNSVAKPSHGVARGVTMH 341
Query: 203 LQGVEIVEDFLPLDLGITDIIMGIHWL 229
+ E DF+ + +++G+ +L
Sbjct: 342 IGSWEGRVDFIVAPMDDFKMVLGMDFL 368
>gi|77555315|gb|ABA98111.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 144 INNKKVVVLTDSGASHNFIS-------NEVVLVLKLPITNTEPYGVILRTGSATKAQGIC 196
+N+ V VL DSGASH+FIS N + L+ P+ P G I C
Sbjct: 372 LNSTPVKVLFDSGASHSFISLKASQQHNLTRVKLRQPMLVHSPGGEI-------TVDTAC 424
Query: 197 RGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + L+ V + + L D+I+G+ WL
Sbjct: 425 INVPIRLRDVVFPSNLMVLIPQTLDVILGMDWL 457
>gi|119196817|ref|XP_001249012.1| hypothetical protein CIMG_02783 [Coccidioides immitis RS]
Length = 491
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
IN ++++VL ++G+ N +S + +LKLPI N ++++TG T C V + +
Sbjct: 20 INQQELMVLINTGSEINLLSWKYAEMLKLPIENKLQVTMVVQTGEVTPFYTFCDKVPVQI 79
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHW 228
+ FL + G +I+ W
Sbjct: 80 GDIVTHTPFLIFEGGDQQLILERPW 104
>gi|6322110|ref|NP_012184.1| gag-pol fusion protein [Saccharomyces cerevisiae S288c]
gi|285812571|tpg|DAA08470.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288c]
Length = 1498
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 39/156 (25%)
Query: 60 SNQEC---GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEG 116
S +EC LC+ C ++ GHR L E A + + D+ ELESK
Sbjct: 257 SREECIKNRLCFYCKKE---GHR----------LNECRARKRVLTDL----ELESK---- 295
Query: 117 AKNQVVEVSLNSVVGL--------TSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
Q + + +V T+ KT+K I N KV L DSG+ +FI ++V
Sbjct: 296 -DQQTLFIKTLPIVHYIAIPEMDNTAEKTIK----IQNTKVKTLFDSGSPTSFIRRDIVE 350
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQ 204
+LK I T P + R ATK+ V + L+
Sbjct: 351 LLKYEIYETPP--LRFRGFVATKSAVTSEAVTIDLK 384
>gi|110288875|gb|ABG66007.1| Zinc knuckle family protein, expressed [Oryza sativa Japonica
Group]
Length = 913
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 151 VLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVE 210
L D GAS + I +V L + P + L S GI V + ++ I
Sbjct: 226 ALCDLGASVSVIPKDVFDKLNFTVLAPTPMCLQLADSSVRYPAGIAEDVPVKIRDFFIPV 285
Query: 211 DFLPLDLGI---TDIIMGIHWLKTLGATHINWKTHSMKFNTRNTIGKNQF 257
DF+ LD+ T +I+G +L T GA +IN +T S++F+ K +F
Sbjct: 286 DFVVLDMDRGKETPLILGRPFLSTAGA-NINVETGSIRFHINGKEEKFEF 334
>gi|78708471|gb|ABB47446.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1705
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKA 192
T+P+ + +N+ VL DSGA+H+FIS + V + L + G+++ +
Sbjct: 653 TAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMYGLRKEELSTPMRVHTPGNSSTS 712
Query: 193 QGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + +Q + + + + L+ D+I+G+ WL
Sbjct: 713 VSFSPSVLIEIQRLPFLANLILLESKYLDVILGMDWL 749
>gi|77550774|gb|ABA93571.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1383
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 39/184 (21%)
Query: 56 AELQSNQECGLCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESK 112
A+ + + G+C+ C + PGH +C K V+ + + A A + + + +
Sbjct: 302 AKREQGSKPGVCFNCGD---PGHYADKCPKPRRMKVVPAQSNSTAPAPK--ARVNHVPAA 356
Query: 113 PTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV------ 166
+GA + ++ L +N+ VL DSGA+H+F+S
Sbjct: 357 EAQGAPDVILGTFL-----------------VNSVPATVLFDSGATHSFLSMSFAGNHGM 399
Query: 167 -VLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMG 225
V L+ P+ + P + A Q C V + +Q V + + + L+ D+I+G
Sbjct: 400 EVEDLRRPLMVSTP------SNQALSLQR-CPSVKIEIQKVPFLANLILLESKDLDVILG 452
Query: 226 IHWL 229
+ WL
Sbjct: 453 MDWL 456
>gi|147767067|emb|CAN69869.1| hypothetical protein VITISV_036524 [Vitis vinifera]
Length = 457
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 144 INNKKVVVLTDSGASHNFIS-NEVVLVLKLPITNTEPYGVILRTGSATK-AQGICRGVGL 201
+N K L D+GA+HNF+S NE +L + ++ G + SATK + G+ RG+ +
Sbjct: 260 VNGKATKALVDTGATHNFVSENE---ARRLELQASKEGGWLKAINSATKPSHGVARGMTM 316
Query: 202 ILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGA 234
+ E DF+ + +++ + +L+ + A
Sbjct: 317 HIGSWEGRVDFIVAPMDDFKMVLRMDFLQRVKA 349
>gi|134034966|sp|Q99315.3|YG31B_YEAST RecName: Full=Transposon Ty3-G Gag-Pol polyprotein; AltName:
Full=Gag3-Pol3; AltName: Full=Transposon Ty3-1 TYA-TYB
polyprotein; Contains: RecName: Full=Capsid protein;
Short=CA; AltName: Full=p24; Contains: RecName:
Full=Spacer peptide p3; Contains: RecName:
Full=Nucleocapsid protein p11; Short=NC; Contains:
RecName: Full=Ty3 protease; Short=PR; AltName: Full=p16;
Contains: RecName: Full=Spacer peptide J; Contains:
RecName: Full=Reverse transcriptase/ribonuclease H;
Short=RT; Short=RT-RH; AltName: Full=p55; Contains:
RecName: Full=Integrase p61; Short=IN; Contains:
RecName: Full=Integrase p58; Short=IN
Length = 1547
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 23/148 (15%)
Query: 60 SNQEC---GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEG 116
S +EC LC+ C ++ GHR L E A + D+ E + + P
Sbjct: 257 SREECIKNRLCFYCKKE---GHR----------LNECRARKAVLTDLELESKDQQTPFIK 303
Query: 117 AKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITN 176
V +++ + T+ KT+K I N KV L DSG+ +FI ++V +LK I
Sbjct: 304 TLPIVHYIAIPEMDN-TAEKTIK----IQNTKVKTLFDSGSPTSFIRRDIVELLKYEIYE 358
Query: 177 TEPYGVILRTGSATKAQGICRGVGLILQ 204
T P + R ATK+ V + L+
Sbjct: 359 TPP--LRFRGFVATKSAVTSEAVTIDLK 384
>gi|326436543|gb|EGD82113.1| hypothetical protein PTSG_11921 [Salpingoeca sp. ATCC 50818]
Length = 515
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 126 LNSVVGLTSPK---TLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGV 182
L++V ++P L+ + IN +L DSG + + ++ E L I + V
Sbjct: 301 LSAVTTASTPAYVPQLRFRATINGAPCNILLDSGCTTDVVAEEFALKNLRVIQVHQDTQV 360
Query: 183 ILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGA--THINWK 240
GS + L +QG+ DFL + +G D ++G +LK A H+N +
Sbjct: 361 TYGDGSHVSRSSMTTAT-LNVQGLTTTRDFLVIPIGGVDAVLGRPFLKDYAARVDHVNDQ 419
Query: 241 TH 242
H
Sbjct: 420 VH 421
>gi|326677060|ref|XP_003200744.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1430
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 123 EVSLNSVVGLTSPKTLK--LASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPY 180
E+S N V + LK L+ E + V + DSGA+ NFI + LK+P T+ P+
Sbjct: 330 ELSGNEVPPANTVLALKAILSWESHQFPVQAMIDSGAAGNFIDLSLAKKLKIP-THLLPH 388
Query: 181 --------GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTL 232
G L G T+A + + L + + E F +D +I+G WL
Sbjct: 389 PQSVTALDGRPLEPGKVTEA---TQSLKLTIAKHQQEETFYLIDSPEYPVILGHPWLHRH 445
Query: 233 GATHINWKTHSM 244
HINW T S+
Sbjct: 446 NP-HINWSTGSI 456
>gi|38344348|emb|CAD40170.2| OSJNBa0061A09.9 [Oryza sativa Japonica Group]
Length = 1653
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ VL DSGA+H+FIS + V V L + G+++ + + + +
Sbjct: 602 VNSIPATVLFDSGATHSFISKKFVGVHGLIREELSTPMRVHTPGNSSSSVQFSPSITIEI 661
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
QG + + + L+ D+I+G+ WL
Sbjct: 662 QGSPFLANLILLESKDLDVILGMDWL 687
>gi|326676605|ref|XP_003200625.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1430
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 123 EVSLNSVVGLTSPKTLK--LASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPY 180
E+S N V + LK L+ E + V + DSGA+ NFI + LK+P T+ P+
Sbjct: 330 ELSGNEVPPANTVLALKAILSWESHQFPVQAMIDSGAAGNFIDLSLAKKLKIP-THLLPH 388
Query: 181 --------GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTL 232
G L G T+A + + L + + E F +D +I+G WL
Sbjct: 389 PQSVTALDGRPLEPGKVTEA---TQSLKLTIAKHQQEETFYLIDSPEYPVILGHPWLHRH 445
Query: 233 GATHINWKTHSM 244
HINW T S+
Sbjct: 446 NP-HINWSTGSI 456
>gi|326670590|ref|XP_003199242.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1430
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 123 EVSLNSVVGLTSPKTLK--LASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPY 180
E+S N V + LK L+ E + V + DSGA+ NFI + LK+P T+ P+
Sbjct: 330 ELSGNEVPPANTVLALKAILSWESHQFPVQAMIDSGAAGNFIDLSLAKKLKIP-THLLPH 388
Query: 181 --------GVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTL 232
G L G T+A + + L + + E F +D +I+G WL
Sbjct: 389 PQSVTALDGRPLEPGKVTEA---TQSLKLTIAKHQQEETFYLIDSPEYPVILGHPWLHRH 445
Query: 233 GATHINWKTHSM 244
HINW T S+
Sbjct: 446 NP-HINWSTGSI 456
>gi|49387854|dbj|BAD26519.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50251633|dbj|BAD29636.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 214
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 113 PTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV 166
P+ ++ V++SL ++VG+ + + L +N + +V L D+G+ H F+S++V
Sbjct: 108 PSTPTDDEEVQISLVALVGICVTQMMLLPVVVNGETMVALVDTGSRHTFLSDDV 161
>gi|13129458|gb|AAK13116.1|AC080019_8 polyprotein [Oryza sativa Japonica Group]
Length = 2162
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKA 192
T+P+ + +N+ VL DSGA+H+FIS + V + L + G+++ +
Sbjct: 987 TAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMYGLRKEELSTPMRVHTPGNSSTS 1046
Query: 193 QGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + +Q + + + + L+ D+I+G+ WL
Sbjct: 1047 VSFSPSVLIEIQRLPFLANLILLESKYLDVILGMDWL 1083
>gi|54291789|gb|AAV32158.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1131
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 20/135 (14%)
Query: 107 RELESKPTEGAKNQVV-EVSLNSVVGL---TSPKTLKLASEINNKKVVVLTDSGASHNFI 162
R +++ P + N + +N V +PK + +N+ VL DSGA+H+F+
Sbjct: 310 RRVKNAPVQNNSNAPAPKAHVNHVAAAEAQNAPKLVLGTFPVNSIPAYVLFDSGATHSFL 369
Query: 163 SN--------EVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLP 214
S EV+ + + + NT G+ + C V + ++ + + +
Sbjct: 370 SKIFASDHGMEVISLGRPLLVNT--------LGNQVSSTQYCTSVTIEIEEIPFLSSLIS 421
Query: 215 LDLGITDIIMGIHWL 229
L+ D+I+G+ WL
Sbjct: 422 LESKDLDVILGMDWL 436
>gi|77555076|gb|ABA97872.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 923
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 56 AELQSNQECGLCYKCDEKFSPGH---RCRKQELQVVLLQEYEAEAQAVEDVGQERELESK 112
A+ + + G+C+ C E PGH +C K V+ + + A A
Sbjct: 120 AKREQGNKPGVCFNCGE---PGHYSDKCLKPRRVKVVPAQNNSTAPA------------- 163
Query: 113 PTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKL 172
+K +V V+ + +P + +N+ VL DSGA+H+F+S +
Sbjct: 164 ----SKARVNHVA--AAEAQCAPDVILGTFPVNSVPATVLFDSGATHSFLSMSFAGNHGM 217
Query: 173 PITN-TEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
I + P V + A +Q V + +QGV + + + L+ D+I+G+ WL
Sbjct: 218 EIEDLRHPLMVSTLSNQALSSQR-SPSVRIEIQGVPFLANLILLESKHLDVILGMDWL 274
>gi|270356908|gb|ACZ80693.1| putative retrotransposon nucleocapsid protein [Filobasidiella
depauperata]
Length = 1481
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 132 LTSPKTLKLASEINNKKVVVLTDSGASHNFISNEVV-------LVLKLPITNTEPYGVIL 184
+ +PK + + + + DSGA++NFI++ + + + P+T G +
Sbjct: 274 MENPKQMTMEYNKERYETFAMIDSGATNNFINSSFLDKTNITKIQKEHPVTLQVIDGRPI 333
Query: 185 RTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWLKTLGATHINWKTHSM 244
++G+ T + + + QG F +G II+GI WL T I+W T +
Sbjct: 334 KSGAVTH---MTAPISMTAQGHSETISFDITSIGAYPIILGIPWL-TKHNPSISWATKKL 389
Query: 245 KF 246
+F
Sbjct: 390 EF 391
>gi|147769722|emb|CAN69702.1| hypothetical protein VITISV_020318 [Vitis vinifera]
Length = 1454
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 109 LESKPTEGAKNQVVEVSLNSVVGLTSPKT------LKLASEINNKKVVVLTDSGASHNFI 162
+E K EG LN++ PK + + + +N K L D+GA+HNF+
Sbjct: 317 IEEKEQEGDAKMGSLQLLNALKAKPMPKMPQSKGLMYVEALVNGKATKALVDTGATHNFV 376
Query: 163 SNEVVLVLKLPITNTEPYGVILRTGSATK-AQGICRGVGLILQGVEIVEDFLPLDLGITD 221
S + L+L + G + SA K + G+ R V + + E DF +
Sbjct: 377 SKDEARRLELQASKEG--GWLKAVNSAAKPSHGVAREVTMHIGSWEGRVDFTVAPMDDFK 434
Query: 222 IIMGIHWLKTLGA 234
+++G+ +L+ + A
Sbjct: 435 MVLGMDFLQKVXA 447
>gi|62733030|gb|AAX95147.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549641|gb|ABA92438.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1535
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 33/181 (18%)
Query: 56 AELQSNQECGLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTE 115
A+ + + G+C+ C E +C K V+ + + A A
Sbjct: 299 AKREQGNKPGVCFNCGELGHYSDKCPKPRRVKVVPAQNNSTAPAT--------------- 343
Query: 116 GAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VL 168
K +V V+ G +P + +N+ VL DSGA+H+F+S +
Sbjct: 344 --KARVNHVAAAEAQG--APDVILGTFPVNSVPATVLFDSGATHSFLSMSFAGNHGMEIE 399
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHW 228
L+ P+ + P L + + V + +QGV + + + L+ D+I+G+ W
Sbjct: 400 DLRRPLMVSAPSNQALLSQRSP-------SVRIEIQGVPFLANLILLESNDLDVILGMDW 452
Query: 229 L 229
L
Sbjct: 453 L 453
>gi|78707944|gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1778
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 41/86 (47%)
Query: 144 INNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLIL 203
+N+ VL DSGA+H+F+S + + + + ++ G+ + C V + +
Sbjct: 675 VNSIPATVLFDSGATHSFLSKSFAIKHGMEVVSLGRPLLVNTPGNQAFSTRYCPSVTIEI 734
Query: 204 QGVEIVEDFLPLDLGITDIIMGIHWL 229
+ V + L+ D+I+G+ WL
Sbjct: 735 EEVPFPSSLILLESKDLDVILGMDWL 760
>gi|224158034|ref|XP_002337925.1| predicted protein [Populus trichocarpa]
gi|222870020|gb|EEF07151.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESK 112
G C+KC +KF PGH+C +EL ++ E E + ER+L K
Sbjct: 300 GQCFKCGDKFMPGHKCNVKELHMIEGNEEEGRVKVYPVAILERKLIKK 347
>gi|146291076|sp|Q7LHG5.2|YI31B_YEAST RecName: Full=Transposon Ty3-I Gag-Pol polyprotein; AltName:
Full=Gag3-Pol3; AltName: Full=Transposon Ty3-2 TYA-TYB
polyprotein; Contains: RecName: Full=Capsid protein;
Short=CA; AltName: Full=p24; Contains: RecName:
Full=Spacer peptide p3; Contains: RecName:
Full=Nucleocapsid protein p11; Short=NC; Contains:
RecName: Full=Ty3 protease; Short=PR; AltName: Full=p16;
Contains: RecName: Full=Spacer peptide J; Contains:
RecName: Full=Reverse transcriptase/ribonuclease H;
Short=RT; Short=RT-RH; AltName: Full=p55; Contains:
RecName: Full=Integrase p52; Short=IN; Contains:
RecName: Full=Integrase p49; Short=IN
Length = 1498
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 39/156 (25%)
Query: 60 SNQEC---GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEG 116
S +EC LC+ C ++ GHR L E A + D+ ELESK
Sbjct: 257 SREECIKNRLCFYCKKE---GHR----------LNECRARKAVLTDL----ELESK---- 295
Query: 117 AKNQVVEVSLNSVVGL--------TSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVL 168
Q + + +V T+ KT+K I N KV L DSG+ +FI ++V
Sbjct: 296 -DQQTLFIKTLPIVHYIAIPEMDNTAEKTIK----IQNTKVKTLFDSGSPTSFIRRDIVE 350
Query: 169 VLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQ 204
+LK I T P + R ATK+ V + L+
Sbjct: 351 LLKYEIYETPP--LRFRGFVATKSAVTSEAVTIDLK 384
>gi|55168106|gb|AAV43974.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1568
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 66/176 (37%), Gaps = 41/176 (23%)
Query: 65 GLCYKCDEKFSPGHRCRKQELQVVLLQEYEAEAQAVEDVGQERELESKPTEGAKN-QVVE 123
G+C+ C + PGH K + R +++ PT N +
Sbjct: 479 GVCFNCGD---PGHYADK--------------------CPKPRRVKNAPTPNNSNVPAPK 515
Query: 124 VSLNSVVGL---TSPKTLKLASEINNKKVVVLTDSGASHNFISNEV-------VLVLKLP 173
+N V +P + +N+ VL DSGA+H+F+S V+ L P
Sbjct: 516 ARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASNHGMEVVSLGRP 575
Query: 174 ITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
+ P G+ + C V + ++ V + L+ D+I+G+ WL
Sbjct: 576 LLVNTP-------GNQVFSTQYCPSVTIEIEEVPFPSSLILLECKDLDVILGMDWL 624
>gi|384499144|gb|EIE89635.1| hypothetical protein RO3G_14346 [Rhizopus delemar RA 99-880]
Length = 1080
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 34/151 (22%)
Query: 26 FLCTWGGFNSDRIVQVYPAHEGRGFRKL-TEAELQSNQECGLCYKCDEKFSPGHRCRKQE 84
F C+ G N H + L AE + ++ CYKC + + GH C+K E
Sbjct: 377 FFCSHHGKNG--------THNSKDCYSLKNRAEKNTEKKENNCYKCHQPWFKGHVCKKDE 428
Query: 85 LQVVL------------LQEYEAEAQA-VEDVGQERELESKPTEGAKNQVVEVSLNSVVG 131
+ VL + + AE +A +ED+ + + SK A N NS
Sbjct: 429 TRRVLAVSKVEKQEESQIDKATAEVEAMMEDLSYDCKYPSKSKNKACND------NSAFN 482
Query: 132 LTSPKTLKLASEINNKKVVVLTDSGASHNFI 162
L +P I N K++ L D+ + +FI
Sbjct: 483 LLTPIF------IENTKLIGLIDTESDASFI 507
>gi|301099546|ref|XP_002898864.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104570|gb|EEY62622.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 174
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 49 GFRKLTEAELQSNQECGLCYKCDEKF--SPGHRCRKQELQVVLLQEYEAEAQAVEDVGQE 106
G+ K E SN++ GL Y D +PG ++E L + +E ++D+G
Sbjct: 13 GYEKALETTRASNEKLGLGY-IDLYLLHAPGDAATREETWRALKELHEQ--GVLKDIGVS 69
Query: 107 RELESKPTEGAKNQVVEVSLNSVVGLTSPKTLKLASEINNKKVVVLTDSGASHNFIS 163
E+ + K V+ ++N + LT+P L++A+E++ VL +++FI+
Sbjct: 70 NFGEAHLEKLLKTAKVKPAVNQAIKLTNPTLLEIATEVDATPAQVLVAFSLANDFIT 126
>gi|224117380|ref|XP_002317559.1| predicted protein [Populus trichocarpa]
gi|222860624|gb|EEE98171.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 33 FNSDRIVQVYP--------AHEGRGFRKLTEAELQSNQECGLCYKCDEKFSPGHRCRKQE 84
FN++R + P E ++ T + ++ GLC+K D+KF PGH+C +
Sbjct: 145 FNNERSAGITPYKPFNQHGVDEQSSPKQSTNTLYEQRRKLGLCFKYDDKFVPGHKCSVKG 204
Query: 85 LQVVLLQEYEAE 96
+ ++ +E E E
Sbjct: 205 IHLIEGREDEKE 216
>gi|110289018|gb|ABB47435.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1755
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKA 192
T+P+ + +N+ VL DSGA+H+FIS + V + L + G+++ +
Sbjct: 627 TAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMYGLRKEELSTPMRVHTPGNSSTS 686
Query: 193 QGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + +Q + + + + L+ D+I+G+ WL
Sbjct: 687 VSFSPSVLIEIQRLPFLANLILLESKDLDVILGMDWL 723
>gi|18652528|gb|AAL77161.1|AC091732_12 Putative polyprotein [Oryza sativa Japonica Group]
Length = 1731
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 133 TSPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKA 192
T+P+ + +N+ VL DSGA+H+FIS + V + L + G+++ +
Sbjct: 603 TAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMYGLRKEELSTPMRVHTPGNSSTS 662
Query: 193 QGICRGVGLILQGVEIVEDFLPLDLGITDIIMGIHWL 229
V + +Q + + + + L+ D+I+G+ WL
Sbjct: 663 VSFSPSVLIEIQRLPFLANLILLESKDLDVILGMDWL 699
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,965,357,218
Number of Sequences: 23463169
Number of extensions: 156809909
Number of successful extensions: 404463
Number of sequences better than 100.0: 733
Number of HSP's better than 100.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 424
Number of HSP's that attempted gapping in prelim test: 403537
Number of HSP's gapped (non-prelim): 778
length of query: 258
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 119
effective length of database: 9,097,814,876
effective search space: 1082639970244
effective search space used: 1082639970244
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)