Query         045527
Match_columns 258
No_of_seqs    244 out of 1139
Neff          7.8 
Searched_HMMs 13730
Date          Mon Mar 25 04:39:05 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045527.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045527hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2fmba_ b.50.1.1 (A:) EIAV pro  99.0 1.7E-09 1.2E-13   79.3   9.9   94  136-234     7-100 (104)
  2 d2nmza1 b.50.1.1 (A:1-99) Huma  98.4 8.3E-07 6.1E-11   62.6   9.2   91  138-239     9-99  (99)
  3 d4fiva_ b.50.1.1 (A:) Feline i  98.3   2E-07 1.5E-11   68.8   4.7   95  136-234     9-109 (113)
  4 d1nsoa_ b.50.1.1 (A:) Mason-Pf  98.2 9.8E-07 7.2E-11   64.5   6.7   91  139-234    11-103 (107)
  5 d3ecga1 b.50.1.1 (A:1-99) Huma  98.2 3.3E-06 2.4E-10   59.4   8.8   90  138-238     9-98  (99)
  6 d1hvca_ b.50.1.1 (A:) Human im  98.1 2.2E-06 1.6E-10   67.8   7.1   93  137-240     8-100 (203)
  7 d1nc8a_ g.40.1.1 (A:) HIV nucl  97.9 1.6E-06 1.2E-10   46.5   1.2   24   61-84      3-26  (29)
  8 d1hvca_ b.50.1.1 (A:) Human im  97.3 0.00047 3.4E-08   54.2   8.9   92  137-239   112-203 (203)
  9 d2rspa_ b.50.1.1 (A:) Rous sar  97.2 0.00011 7.7E-09   54.6   3.7   91  142-237    25-121 (124)
 10 d2pmaa1 b.50.1.3 (A:26-166) Un  96.9 0.00041   3E-08   52.5   4.3   44  197-241    91-136 (141)
 11 d2exfa1 g.40.1.1 (A:12-53) HIV  96.7 0.00028   2E-08   42.1   1.6   18   66-83      3-20  (42)
 12 d2exfa1 g.40.1.1 (A:12-53) HIV  96.7 0.00035 2.6E-08   41.7   1.9   19   65-83     23-41  (42)
 13 d1dsqa_ g.40.1.1 (A:) Nucleic   96.4 0.00044 3.2E-08   35.2   0.9   18   65-82      3-20  (26)
 14 d1bxoa_ b.50.1.2 (A:) Acid pro  96.0  0.0077 5.6E-07   50.2   7.4   95  148-247   207-320 (323)
 15 d1a6bb_ g.40.1.1 (B:) Zinc fin  95.8  0.0021 1.5E-07   36.7   1.9   20   64-83     10-29  (40)
 16 d1wkra_ b.50.1.2 (A:) Acid pro  95.7  0.0067 4.9E-07   51.2   5.8   96  148-248   206-331 (340)
 17 d1izea_ b.50.1.2 (A:) Acid pro  95.6  0.0099 7.2E-07   49.5   6.6   96  148-247   208-320 (323)
 18 d1oewa_ b.50.1.2 (A:) Endothia  95.4   0.032 2.3E-06   46.8   9.3   96  148-247   213-328 (330)
 19 d2bjua1 b.50.1.2 (A:1-329) Pla  94.9   0.056 4.1E-06   44.5   9.2   97  147-248   207-324 (329)
 20 d1miqa_ b.50.1.2 (A:) Plasmeps  94.9   0.072 5.3E-06   45.0  10.1  105  137-248   240-370 (373)
 21 d3cmsa_ b.50.1.2 (A:) Chymosin  94.7   0.021 1.6E-06   47.0   5.9   95  148-247   210-320 (323)
 22 d1j71a_ b.50.1.2 (A:) Acid pro  94.5   0.048 3.5E-06   45.8   7.9   98  142-247   202-321 (334)
 23 d1eaga_ b.50.1.2 (A:) Acid pro  94.5   0.013 9.3E-07   49.4   3.9   26  222-248   304-329 (342)
 24 d1am5a_ b.50.1.2 (A:) Pepsin(o  94.3   0.028   2E-06   46.6   5.8   93  147-247   207-321 (324)
 25 d1t6ex_ b.50.1.2 (X:) Xylanase  94.1   0.054 3.9E-06   45.9   7.3   28  220-248   344-371 (381)
 26 g1htr.1 b.50.1.2 (P:,B:) Pepsi  93.7    0.04 2.9E-06   46.9   5.8   93  149-247   255-369 (372)
 27 d1dpja_ b.50.1.2 (A:) Acid pro  93.7   0.093 6.8E-06   43.3   8.0   94  149-247   213-326 (329)
 28 d1qdma2 b.50.1.2 (A:2-247,A:24  93.3   0.082 5.9E-06   43.4   6.8   93  148-247   216-334 (337)
 29 d1smra_ b.50.1.2 (A:) Chymosin  93.3    0.14 9.9E-06   42.4   8.3   94  148-248   214-333 (335)
 30 d1hrna_ b.50.1.2 (A:) Chymosin  92.9   0.091 6.6E-06   43.5   6.6   94  149-248   218-335 (337)
 31 d2apra_ b.50.1.2 (A:) Acid pro  92.8    0.17 1.2E-05   41.9   8.2   97  142-247   202-321 (325)
 32 d3psga_ b.50.1.2 (A:) Pepsin(o  92.7    0.18 1.3E-05   42.6   8.4   93  149-247   254-367 (370)
 33 d1mppa_ b.50.1.2 (A:) Pepsin {  88.8    0.42 3.1E-05   39.7   6.9   33  215-248   317-349 (357)
 34 g1b5f.1 b.50.1.2 (A:,B:) Plant  88.8    0.56   4E-05   38.0   7.5   26  222-248   299-324 (326)
 35 d2qp8a1 b.50.1.2 (A:60-446) be  88.5    0.64 4.7E-05   39.1   8.0   30  219-249   330-359 (387)
 36 g1lya.1 b.50.1.2 (A:,B:) Cathe  88.0    0.55   4E-05   38.1   7.0   95  148-248   217-336 (338)
 37 d1cl4a_ g.40.1.1 (A:) Nucleoca  87.0    0.13 9.8E-06   27.7   1.6   19   65-83      3-21  (32)
 38 d1dsva_ g.40.1.1 (A:) Nucleic   84.9    0.17 1.2E-05   27.2   1.3   20   64-83      2-21  (31)
 39 d1wkra_ b.50.1.2 (A:) Acid pro  67.4       5 0.00036   32.4   6.4   25  138-162    14-40  (340)
 40 d1bxoa_ b.50.1.2 (A:) Acid pro  64.5     2.9 0.00021   33.5   4.2   28  137-164    16-43  (323)
 41 d1izea_ b.50.1.2 (A:) Acid pro  63.8     2.9 0.00021   33.6   4.1   26  138-163    17-42  (323)
 42 d1smra_ b.50.1.2 (A:) Chymosin  52.1     6.3 0.00046   31.6   4.2   26  137-162    16-43  (335)
 43 d2bjua1 b.50.1.2 (A:1-329) Pla  46.7     9.4 0.00068   30.1   4.4   28  137-164    15-44  (329)
 44 d1oewa_ b.50.1.2 (A:) Endothia  46.6      16  0.0011   29.2   5.9   28  137-164    16-45  (330)
 45 d1j71a_ b.50.1.2 (A:) Acid pro  45.7     9.1 0.00066   30.9   4.2   26  137-162    13-40  (334)
 46 g1lya.1 b.50.1.2 (A:,B:) Cathe  44.9     9.6  0.0007   30.0   4.2   27  137-163    14-42  (338)
 47 d1qdma2 b.50.1.2 (A:2-247,A:24  42.9      11  0.0008   29.6   4.3   25  138-162    17-43  (337)
 48 d2apra_ b.50.1.2 (A:) Acid pro  42.9      11  0.0008   30.0   4.3   29  137-165    16-46  (325)
 49 d1eaga_ b.50.1.2 (A:) Acid pro  42.2      11 0.00081   30.2   4.2   25  138-162    14-40  (342)
 50 d1mppa_ b.50.1.2 (A:) Pepsin {  42.1      11 0.00082   30.3   4.3   26  137-162    15-42  (357)
 51 d1dpja_ b.50.1.2 (A:) Acid pro  42.0      11 0.00083   29.8   4.2   26  138-163    15-42  (329)
 52 d3cmsa_ b.50.1.2 (A:) Chymosin  41.7      12 0.00085   29.4   4.2   27  137-163    15-43  (323)
 53 d2ct7a1 g.44.1.4 (A:8-80) Ring  41.1     3.3 0.00024   26.3   0.5   18   64-81     44-64  (73)
 54 d1hrna_ b.50.1.2 (A:) Chymosin  41.0      12 0.00087   29.7   4.2   26  137-162    16-43  (337)
 55 d3psga_ b.50.1.2 (A:) Pepsin(o  40.6      12 0.00087   30.6   4.2   29  137-165    57-87  (370)
 56 g1b5f.1 b.50.1.2 (A:,B:) Plant  40.0      13 0.00093   29.2   4.2   27  136-162    13-41  (326)
 57 d1am5a_ b.50.1.2 (A:) Pepsin(o  39.2      13 0.00098   29.2   4.2   28  137-164    13-42  (324)
 58 g1htr.1 b.50.1.2 (P:,B:) Pepsi  37.0      15  0.0011   29.9   4.2   27  137-163    56-84  (372)
 59 d2qp8a1 b.50.1.2 (A:60-446) be  36.3      14   0.001   30.2   4.0   27  137-163    15-43  (387)
 60 d1v86a_ d.15.1.1 (A:) hypothet  35.2      36  0.0026   22.1   5.3   44  134-177    14-57  (95)
 61 d1yqba1 d.15.1.1 (A:15-98) Ubi  27.9      30  0.0022   21.8   3.8   43  134-176     4-46  (84)
 62 d2j0151 g.41.8.5 (5:2-60) Ribo  27.9      22  0.0016   21.4   2.8   34   49-82      6-47  (59)
 63 d1miqa_ b.50.1.2 (A:) Plasmeps  27.9     9.4 0.00069   31.0   1.3   27  138-164    62-90  (373)
 64 d1rqga3 g.41.1.1 (A:139-173) M  25.2      15  0.0011   19.9   1.4   19   64-82      2-20  (35)
 65 d1v5ta_ d.15.1.1 (A:) 8430435i  24.6      24  0.0018   22.6   2.8   43  134-176     4-47  (90)
 66 d1t3qa2 d.15.4.2 (A:7-87) Quin  22.8      53  0.0039   20.8   4.2   59  136-209     2-60  (81)
 67 d1wh3a_ d.15.1.1 (A:) 2'-5'-ol  21.1      83   0.006   19.6   5.0   43  134-176     4-47  (87)
 68 d1vq0a2 g.81.1.1 (A:231-287) H  20.6     8.4 0.00061   23.1  -0.4   28   50-77     12-43  (57)

No 1  
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]}
Probab=98.97  E-value=1.7e-09  Score=79.30  Aligned_cols=94  Identities=24%  Similarity=0.243  Sum_probs=68.7

Q ss_pred             CeEEEEEEECCEEEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccccccccceEeeeeEeeeceeEEeecccc
Q 045527          136 KTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPL  215 (258)
Q Consensus       136 ~~i~i~~~I~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~~~f~Vl  215 (258)
                      +...+.++|+|+++.+|+||||.+|+|+..-............+ ....+.|..+...  ...+.+.+.|+.....++|.
T Consensus         7 ~RP~~~i~I~Gq~v~~LLDTGAD~TVI~~~~~p~~~~~~~~~~~-~~igg~g~~~~~~--~~~v~i~~~g~~~~~~~lV~   83 (104)
T d2fmba_           7 KRPTTIVLINDTPLNVLLDTGADTSVLTTAHYNRLKYRGRKYQG-TGIGGVGGNVETF--STPVTIKKKGRHIKTRMLVA   83 (104)
T ss_dssp             SCCEEEEEETTEEEEEEECTTCSSCEEEHHHHHHCSSCCCCEEC-CCEEETTEEECCE--EEEEEEEETTEEEEEEEEEE
T ss_pred             cCeEEEEEECCEEEEEEEeCCCCeEEEcccccCccCCCCCCcce-eEEEEecceEEEE--EEEEEEEECCeEEEEEEEEC
Confidence            34567899999999999999999999999988876443322222 2333445444432  24578888898888888888


Q ss_pred             CCCCccEEecchHHHhcCC
Q 045527          216 DLGITDIIMGIHWLKTLGA  234 (258)
Q Consensus       216 ~~~~~dvILG~dwL~~~~~  234 (258)
                      +.. .+ |||.|+|.+++.
T Consensus        84 p~P-vn-LlGRdlL~qlG~  100 (104)
T d2fmba_          84 DIP-VT-ILGRDILQDLGA  100 (104)
T ss_dssp             SCS-SC-EECHHHHHHHTC
T ss_pred             CCC-cc-eecHHHHHHhCC
Confidence            842 33 999999999985


No 2  
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=98.41  E-value=8.3e-07  Score=62.65  Aligned_cols=91  Identities=21%  Similarity=0.262  Sum_probs=71.6

Q ss_pred             EEEEEEECCEEEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccccccccceEeeeeEeeeceeEEeeccccCC
Q 045527          138 LKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDL  217 (258)
Q Consensus       138 i~i~~~I~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~~~f~Vl~~  217 (258)
                      ..+.++|+|+...||+||||..+.+..     ..++-..  ..++..+-|+.++.... .++++++.|+.....++|-|.
T Consensus         9 P~vtvkIgGq~~eaLLDTGADdTVlee-----i~lpg~W--kPk~IgGIGGfikVrqY-d~i~iei~g~k~~gtVLVgpT   80 (99)
T d2nmza1           9 PLVTIKIGGQLKEALLDTGADDTVIEE-----MSLPGRW--KPKMIGGIGGFIKVRQY-DQIIIEIAGHKAIGTVLVGPT   80 (99)
T ss_dssp             CEEEEEETTEEEEEEECTTCSSCEEES-----CCCCSCC--EEEEEEETTEEEEEEEE-EEEEEEETTEEEEEEEEEESC
T ss_pred             CeEEEEECCEEEEEeeccCCCceEEec-----ccCCCCC--CceEEEeccceEEEEEe-CceEEEECCcEEEEEEEECCC
Confidence            367899999999999999999999853     5665322  23456677888887644 689999999999999988883


Q ss_pred             CCccEEecchHHHhcCCeEEEe
Q 045527          218 GITDIIMGIHWLKTLGATHINW  239 (258)
Q Consensus       218 ~~~dvILG~dwL~~~~~i~ID~  239 (258)
                       ..+ |+|.+.|.+.+. .++|
T Consensus        81 -PvN-IiGRN~Ltq~Gc-tLnf   99 (99)
T d2nmza1          81 -PAN-IIGRNLLTQIGA-TLNF   99 (99)
T ss_dssp             -SSC-EECHHHHTTTTC-EEEC
T ss_pred             -Ccc-EEcccchhhcCc-eecC
Confidence             233 779999999996 8876


No 3  
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]}
Probab=98.34  E-value=2e-07  Score=68.83  Aligned_cols=95  Identities=16%  Similarity=0.169  Sum_probs=61.1

Q ss_pred             CeEEEEEEECCEEEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccccccccceEeeeeEeeeceeEEe-----
Q 045527          136 KTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVE-----  210 (258)
Q Consensus       136 ~~i~i~~~I~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~~-----  210 (258)
                      +...+.+.|+|+++.+|+||||.+++|+..-..... +... .+..+. +-|+.+..... .++.+.+.+.....     
T Consensus         9 ~RP~v~v~I~Gq~v~~LLDTGAD~TVi~~~d~p~~~-~~~~-~~~~~~-GIGG~~~v~~~-~~v~i~~~~~~~~gtvl~g   84 (113)
T d4fiva_           9 KRPEILIFVNGYPIKFLLDTGADITILNRRDFQVKN-SIEN-GRQNMI-GVGGGKRGTNY-INVHLEIRDENYKTQCIFG   84 (113)
T ss_dssp             SCCEEEEEETTEEEEEEECTTCSSCEEEGGGCCCTT-CEEE-EEEEEE-CSSCEEEEEEE-EEEEEEECCTTSCCCEEEE
T ss_pred             cCCeEEEEECCEEEEEEEcCCCCcEEEeccccCCCC-CCCC-CCCeEE-ecCeEEeeeEE-ceEEEEEcCCeEeEEEEEc
Confidence            344678899999999999999999999875433211 1111 112333 45665665433 47778776655443     


Q ss_pred             eccccCCCCcc-EEecchHHHhcCC
Q 045527          211 DFLPLDLGITD-IIMGIHWLKTLGA  234 (258)
Q Consensus       211 ~f~Vl~~~~~d-vILG~dwL~~~~~  234 (258)
                      .+.|++....+ =|||+|+|.+++.
T Consensus        85 ~~pvlp~~~~p~nllGRd~LtqlG~  109 (113)
T d4fiva_          85 NVCVLEDNSLIQPLLGRDNMIKFNI  109 (113)
T ss_dssp             EEEEETTCCCSSCEECHHHHHHTTC
T ss_pred             cccccCCCCCcCCEEChhhhHHhCC
Confidence            34445544443 3899999999984


No 4  
>d1nsoa_ b.50.1.1 (A:) Mason-Pfizer monkey virus protease {Simian retrovirus 1, SRV-1 [TaxId: 11942]}
Probab=98.24  E-value=9.8e-07  Score=64.47  Aligned_cols=91  Identities=14%  Similarity=0.074  Sum_probs=55.7

Q ss_pred             EEEEEECCEEEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccccccccceEeeeeEeee--ceeEEeeccccC
Q 045527          139 KLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQ--GVEIVEDFLPLD  216 (258)
Q Consensus       139 ~i~~~I~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~--g~~~~~~f~Vl~  216 (258)
                      .+.+.|+|+++.+|+||||.+|+|+..-.. ..++..  .......+-|+........ .+.....  +..-.+..+|++
T Consensus        11 ~~~v~I~G~~v~~LLDTGAD~TVI~~~~~p-~~wp~~--~~~~~~~GiGg~~~~~~~~-~~l~~~~~~~~~~~~~p~vv~   86 (107)
T d1nsoa_          11 SLTLWLDDKMFTGLINTGADVTIIKLEDWP-PNWPIT--DTLTNLRGIGQSNNPKQSS-KYLTWRDKENNSGLIKPFVIP   86 (107)
T ss_dssp             CEEEEETTEEEEECCCSSCSSCBCCGGGSC-TTSCCC--CCEEEECSSSEEEECCCBC-CCEEEEETTTEEEEECCBBCT
T ss_pred             EEEEEECCEEEEeeecCCCCcEEEeccccC-CCCCcC--cCccEEEEecCeeeEEEee-eeEEEEeCCCceEEEcceECC
Confidence            466799999999999999999999886543 222221  1223334456555544322 2222222  233334435665


Q ss_pred             CCCccEEecchHHHhcCC
Q 045527          217 LGITDIIMGIHWLKTLGA  234 (258)
Q Consensus       217 ~~~~dvILG~dwL~~~~~  234 (258)
                      ....+ |||+|.|.+++.
T Consensus        87 ~~Pvn-llGRd~L~qlg~  103 (107)
T d1nsoa_          87 NLPVN-LWGRDLLSQMKI  103 (107)
T ss_dssp             TCCCC-BCCHHHHHHHHT
T ss_pred             CCCcC-cccHHHHHHhCC
Confidence            55555 899999999874


No 5  
>d3ecga1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 2 (HIV-2) protease {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=98.23  E-value=3.3e-06  Score=59.43  Aligned_cols=90  Identities=19%  Similarity=0.255  Sum_probs=69.2

Q ss_pred             EEEEEEECCEEEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccccccccceEeeeeEeeeceeEEeeccccCC
Q 045527          138 LKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLDL  217 (258)
Q Consensus       138 i~i~~~I~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~~~f~Vl~~  217 (258)
                      ..+.++|+|+...||+||||..+++.     ..+++-. .+ .++..+-|..+++... .++++++-|+......+|-|.
T Consensus         9 P~vtvkIgGq~~eaLLDTGADdTVle-----~i~lpg~-Wk-Pk~iGGIGGfikVrqY-d~i~Ieicg~k~~gtVLvgpT   80 (99)
T d3ecga1           9 PVVTAYIEGQPVEVLLDTGADDSIVA-----GIELGNN-YS-PKIVGGIGGFINTKEY-KNVEIEVLNKKVRATIMTGDT   80 (99)
T ss_dssp             CEEEEEETTEEEEEEECTTCSSCEEC-----SCCCCSC-CE-EEEEEETTEEEEEEEE-EEEEEEETTEEEEEEEEEECC
T ss_pred             CeEEEEECCEEeeeecccCCCceeee-----ccCCCCC-Cc-ceEEEEeeeeEEEEEe-CcEEEEECCcEEEEEEEeCCC
Confidence            35788999999999999999999984     4566532 22 3556677888887654 689999999998888887553


Q ss_pred             CCccEEecchHHHhcCCeEEE
Q 045527          218 GITDIIMGIHWLKTLGATHIN  238 (258)
Q Consensus       218 ~~~dvILG~dwL~~~~~i~ID  238 (258)
                      . . =|+|++.|.+.+. .+|
T Consensus        81 P-v-NIiGRNlLtqlGc-tLn   98 (99)
T d3ecga1          81 P-I-NIFGRNILTALGM-SLN   98 (99)
T ss_dssp             S-S-CEECHHHHHHTTC-EEE
T ss_pred             C-c-eEEccchhhhhCc-ccC
Confidence            2 2 3789999999996 665


No 6  
>d1hvca_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=98.14  E-value=2.2e-06  Score=67.82  Aligned_cols=93  Identities=18%  Similarity=0.223  Sum_probs=72.2

Q ss_pred             eEEEEEEECCEEEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccccccccceEeeeeEeeeceeEEeeccccC
Q 045527          137 TLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLD  216 (258)
Q Consensus       137 ~i~i~~~I~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~~~f~Vl~  216 (258)
                      ...+.++|+|+.+.||+||||.++++.     ..+++-..  ..++..+-|+.+..... .++++++.++....+++|.|
T Consensus         8 RP~VtVkIgGQ~~eaLLDTGADDTVLe-----~inLpG~W--kPkiIGGIGGfIkVrqY-~~V~IeI~gkk~~gTVLVgP   79 (203)
T d1hvca_           8 RPLVTIRIGGQLKEALLDTGADDTVLE-----EMNLPGKW--KPKMIGGIGGFIKVRQY-DQILIEICGHKAIGTVLVGP   79 (203)
T ss_dssp             CCEEEEESSSCEEEEEECTTCSSEEEE-----CCCCSSCE--EEEEEEETTEEEEEEEE-EEEEEEETTEEEEEEEEEES
T ss_pred             CCeEEEEECCEEEEEEecCCCCceEEe-----cccCCCCC--cccEEEecCceEEEEEe-CCEEEEECCcEEEEEEEECC
Confidence            346789999999999999999999984     35554322  13455577787777644 68999999999999999988


Q ss_pred             CCCccEEecchHHHhcCCeEEEee
Q 045527          217 LGITDIIMGIHWLKTLGATHINWK  240 (258)
Q Consensus       217 ~~~~dvILG~dwL~~~~~i~ID~~  240 (258)
                       ...+ |||.|.|.+.+. .++|.
T Consensus        80 -TPvN-IIGRNlLtqlG~-tLnFp  100 (203)
T d1hvca_          80 -TPVN-IIGRNLLTQIGC-TLNFG  100 (203)
T ss_dssp             -CSSC-EECHHHHGGGTC-EEECT
T ss_pred             -CCcc-ccchhhhhhhhh-eeecc
Confidence             3333 789999999996 99983


No 7  
>d1nc8a_ g.40.1.1 (A:) HIV nucleocapsid {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=97.89  E-value=1.6e-06  Score=46.52  Aligned_cols=24  Identities=17%  Similarity=0.566  Sum_probs=20.0

Q ss_pred             cccCCcceecCCCccCccccCCcc
Q 045527           61 NQECGLCYKCDEKFSPGHRCRKQE   84 (258)
Q Consensus        61 rR~~~lCf~Cg~~gh~~~~Cp~k~   84 (258)
                      .|+...||+||+.||.+++|..++
T Consensus         3 qr~~ikCfNCGkeGH~ar~CrAPR   26 (29)
T d1nc8a_           3 QRKVIRCWNCGKEGHSARQCRAPR   26 (29)
T ss_dssp             CCCCCBCTTTSCBSSCGGGCCSSS
T ss_pred             CcceeEeecCCccchhhhhccCcc
Confidence            456678999999999999997543


No 8  
>d1hvca_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=97.33  E-value=0.00047  Score=54.16  Aligned_cols=92  Identities=18%  Similarity=0.209  Sum_probs=71.6

Q ss_pred             eEEEEEEECCEEEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccccccccceEeeeeEeeeceeEEeeccccC
Q 045527          137 TLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDFLPLD  216 (258)
Q Consensus       137 ~i~i~~~I~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~~~f~Vl~  216 (258)
                      ...+.++|+|+...||+||||..+++     +..+|+-. .+ .++..+-|..++.... .++++++-|+......+|-|
T Consensus       112 rp~vt~ki~gq~~ealldtgaddtv~-----e~~~lpgr-wk-pk~iggiggfikvrqy-~~v~iei~g~k~~gtvlvgp  183 (203)
T d1hvca_         112 RPLVTIKIGGQLKEALLDTGADDTVL-----EEMSLPGR-WK-PKMIGGIGGFIKVRQY-DQILIEICGHKAIGTVLVGP  183 (203)
T ss_dssp             CCEEEEEETTEEEEEEECTTCSSCEE-----ESCCCSSC-CE-EEEEEETTEEEEEEEE-EEEEEEETTEEEEEEEEEEC
T ss_pred             cceEEEecchhHHHHHhcccCCceEE-----ecccCCCC-Cc-ceEEEEeccccceeeE-ccEEEEECCCEEEEEEEECC
Confidence            34688999999999999999999987     34566532 22 3566677888888654 68999999999888888877


Q ss_pred             CCCccEEecchHHHhcCCeEEEe
Q 045527          217 LGITDIIMGIHWLKTLGATHINW  239 (258)
Q Consensus       217 ~~~~dvILG~dwL~~~~~i~ID~  239 (258)
                      .. . =|+|.+.|.+.+. .++|
T Consensus       184 tp-~-niigrn~ltq~g~-tlnf  203 (203)
T d1hvca_         184 TP-V-NIIGRNLLTQIGC-TLNF  203 (203)
T ss_dssp             CS-S-CEECHHHHTTTTC-EEEC
T ss_pred             CC-c-eEEcccchhhcCc-cccC
Confidence            33 2 3789999999996 8876


No 9  
>d2rspa_ b.50.1.1 (A:) Rous sarcoma virus protease {Rous sarcoma virus, strain pr-C [TaxId: 11886]}
Probab=97.22  E-value=0.00011  Score=54.59  Aligned_cols=91  Identities=18%  Similarity=0.132  Sum_probs=46.3

Q ss_pred             EEECCEEEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccccccccceEeeeeEeee------ceeEEeecccc
Q 045527          142 SEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQ------GVEIVEDFLPL  215 (258)
Q Consensus       142 ~~I~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~------g~~~~~~f~Vl  215 (258)
                      ++++|+.+.+|+||||..++|+..-... .++..+..+..+. +-|..+.......-+.+.+.      +..+....+|.
T Consensus        25 ~k~~g~~i~~LLDTGAD~TVI~~~dwp~-~Wp~~~~~~~~i~-GIGg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~p~V~  102 (124)
T d2rspa_          25 VKQRSVYITALLDSGADITIISEEDWPT-DWPVMEAANPQIH-GIGGGIPMRKSRDMIELGVINRDGSLERPLLLFPAVA  102 (124)
T ss_dssp             CSCSEEEEEEEECTTCSSCEEETTTSCT-TSCEEECC----------CCCEEEESSCEEEEEECTTSCBCCCEEECCEEE
T ss_pred             EeeCCEEEEEEEcCCCCeEEEcCCccCC-CCccCCCCCCEEE-EcCCceeeEEeeeeEEEeeEecCCceeeeEEEecCCC
Confidence            3457789999999999999998765321 3333332222232 33333332111011222221      22333333443


Q ss_pred             CCCCccEEecchHHHhcCCeEE
Q 045527          216 DLGITDIIMGIHWLKTLGATHI  237 (258)
Q Consensus       216 ~~~~~dvILG~dwL~~~~~i~I  237 (258)
                      +..  .=|+|+|.|.+++. .+
T Consensus       103 ~tP--vni~GRdiL~qlG~-tL  121 (124)
T d2rspa_         103 MVR--GSILGRDCLQGLGL-RL  121 (124)
T ss_dssp             SCS--SEEECHHHHHHTTC-EE
T ss_pred             CCc--ccEECHhHHHHhCC-EE
Confidence            332  24999999999995 54


No 10 
>d2pmaa1 b.50.1.3 (A:26-166) Uncharacterized protein LPG0085 {Legionella pneumophila [TaxId: 446]}
Probab=96.88  E-value=0.00041  Score=52.55  Aligned_cols=44  Identities=5%  Similarity=-0.049  Sum_probs=37.3

Q ss_pred             eeeeEeeeceeEEeeccccCCC--CccEEecchHHHhcCCeEEEeeC
Q 045527          197 RGVGLILQGVEIVEDFLPLDLG--ITDIIMGIHWLKTLGATHINWKT  241 (258)
Q Consensus       197 ~~v~i~i~g~~~~~~f~Vl~~~--~~dvILG~dwL~~~~~i~ID~~~  241 (258)
                      ..+++.+++..+.+.|.+.+-.  .|+|+||..||...+ +.||-..
T Consensus        91 V~~~i~ig~~~~~ie~tL~dR~~m~yp~LiGR~~L~~~~-~~VD~s~  136 (141)
T d2pmaa1          91 VLLNIKLGDKVRTIKVNLTNRKRFLYPLLLGRDAIIDFN-GAVDPAL  136 (141)
T ss_dssp             EEEEEEETTEEEEEEEEEECCCCCSCSEEECHHHHHHTT-EEEETTC
T ss_pred             EEEEEEECCEEEEEEEEECCCCCCCCCEEECHHHHhcCC-EEECCch
Confidence            4568889999999999999865  689999999999988 5888654


No 11 
>d2exfa1 g.40.1.1 (A:12-53) HIV nucleocapsid {Human immunodeficiency virus type 1, different isolates [TaxId: 11676]}
Probab=96.68  E-value=0.00028  Score=42.14  Aligned_cols=18  Identities=22%  Similarity=0.759  Sum_probs=12.2

Q ss_pred             cceecCCCccCccccCCc
Q 045527           66 LCYKCDEKFSPGHRCRKQ   83 (258)
Q Consensus        66 lCf~Cg~~gh~~~~Cp~k   83 (258)
                      .||+||+.||.+.+||.+
T Consensus         3 ~C~~Cg~~GH~~~~Cp~~   20 (42)
T d2exfa1           3 KCFNCGKEGHTARNCRAP   20 (42)
T ss_dssp             CCTTTCCSSSCTTTCSSC
T ss_pred             ccccCCCcCcCcccCcCC
Confidence            477777777777777653


No 12 
>d2exfa1 g.40.1.1 (A:12-53) HIV nucleocapsid {Human immunodeficiency virus type 1, different isolates [TaxId: 11676]}
Probab=96.66  E-value=0.00035  Score=41.70  Aligned_cols=19  Identities=21%  Similarity=0.571  Sum_probs=17.1

Q ss_pred             CcceecCCCccCccccCCc
Q 045527           65 GLCYKCDEKFSPGHRCRKQ   83 (258)
Q Consensus        65 ~lCf~Cg~~gh~~~~Cp~k   83 (258)
                      ..||+||+.||.+.+||++
T Consensus        23 ~~C~~Cg~~GH~~~~Cp~r   41 (42)
T d2exfa1          23 KGCWKCGKEGHQMKDCTER   41 (42)
T ss_dssp             SSCSSSCCSSSCTTTCCSS
T ss_pred             CccccCCCCCeecccCCCC
Confidence            3599999999999999975


No 13 
>d1dsqa_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=96.38  E-value=0.00044  Score=35.21  Aligned_cols=18  Identities=17%  Similarity=0.674  Sum_probs=16.3

Q ss_pred             CcceecCCCccCccccCC
Q 045527           65 GLCYKCDEKFSPGHRCRK   82 (258)
Q Consensus        65 ~lCf~Cg~~gh~~~~Cp~   82 (258)
                      ..||.||+.||..++|+.
T Consensus         3 pvcfscgktghikkdck~   20 (26)
T d1dsqa_           3 PVCFSCGKTGHIKRDCKE   20 (26)
T ss_dssp             CBCTTTCCBSSCTTTTTC
T ss_pred             CEEEecCCcccchhhhhh
Confidence            479999999999999973


No 14 
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]}
Probab=95.96  E-value=0.0077  Score=50.20  Aligned_cols=95  Identities=12%  Similarity=0.042  Sum_probs=57.7

Q ss_pred             EEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecc-ccc-ccccceEeeeeEeeeceeEEeec-------------
Q 045527          148 KVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRT-GSA-TKAQGICRGVGLILQGVEIVEDF-------------  212 (258)
Q Consensus       148 ~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~-G~~-~~~~~~~~~v~i~i~g~~~~~~f-------------  212 (258)
                      ...++||||++..++...++.++--.+...    ....+ +.. ..+....+.+.+.++|..+.+..             
T Consensus       207 ~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~----~~~~~~~~~~~~c~~~~p~itf~f~g~~~~i~~~~~~~~~~~~~~~  282 (323)
T d1bxoa_         207 GFSGIADTGTTLLLLDDSVVSQYYSQVSGA----QQDSNAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPSGDGST  282 (323)
T ss_dssp             EEEEEECTTCSSEEECHHHHHHHHTTSTTC----EEETTTTEEEECTTCCCCCEEEEETTEEEEECHHHHEEEECSSSSC
T ss_pred             CcceEEecccccccCCHHHHHHHHHHhCCc----cccCCCCcEEEeccCCCCcEEEEECCEEEEEChHHeEEEEcCCCCE
Confidence            567999999999999999999874322110    01011 110 11111223455666665544321             


Q ss_pred             ---cccCCCCcc-EEecchHHHhcCCeEEEeeCCEEEEe
Q 045527          213 ---LPLDLGITD-IIMGIHWLKTLGATHINWKTHSMKFN  247 (258)
Q Consensus       213 ---~Vl~~~~~d-vILG~dwL~~~~~i~ID~~~~~v~f~  247 (258)
                         .+.+..+.+ .|||..||+.+- +..|+.+++|-|.
T Consensus       283 C~~~i~~~~~~~~~ILG~~flr~~y-~vfD~~~~~IGfA  320 (323)
T d1bxoa_         283 CLGGIQSNSGIGFSIFGDIFLKSQY-VVFDSDGPQLGFA  320 (323)
T ss_dssp             EEESEEECTTCSSEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred             EEEEEECCCCCCcEEECHHHhCCEE-EEEECCCCEEeEE
Confidence               111222233 699999999999 5999999999885


No 15 
>d1a6bb_ g.40.1.1 (B:) Zinc finger protein ncp10 {Moloney murine leukemia virus, MoMLV [TaxId: 11801]}
Probab=95.76  E-value=0.0021  Score=36.69  Aligned_cols=20  Identities=30%  Similarity=0.468  Sum_probs=17.9

Q ss_pred             CCcceecCCCccCccccCCc
Q 045527           64 CGLCYKCDEKFSPGHRCRKQ   83 (258)
Q Consensus        64 ~~lCf~Cg~~gh~~~~Cp~k   83 (258)
                      +..|-||.++||-+++||++
T Consensus        10 kDQCAyCke~GHW~~dCPkk   29 (40)
T d1a6bb_          10 RDQCAYCKEKGHWAKDCPKK   29 (40)
T ss_dssp             SSSCSSSCCTTCCTTSCSSS
T ss_pred             chhhHHHhhcCchhhhCccC
Confidence            45699999999999999965


No 16 
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]}
Probab=95.66  E-value=0.0067  Score=51.23  Aligned_cols=96  Identities=13%  Similarity=0.093  Sum_probs=57.6

Q ss_pred             EEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeeccccc-cccc--ceEeeeeEeeeceeEEee--ccccCC-----
Q 045527          148 KVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSA-TKAQ--GICRGVGLILQGVEIVED--FLPLDL-----  217 (258)
Q Consensus       148 ~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~-~~~~--~~~~~v~i~i~g~~~~~~--f~Vl~~-----  217 (258)
                      ...++||||++..++...+++.+.-....    .....+|.. +.+.  ...+.+.+.++|..+.+.  .+|.+.     
T Consensus       206 ~~~aiiDSGtt~~~lP~~~~~~l~~~~~~----~~~~~~~~~~~~c~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~  281 (340)
T d1wkra_         206 STAGIVDTGTTLTLIASDAFAKYKKATGA----VADNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRNLNTA  281 (340)
T ss_dssp             EEEEEECTTBCSEEECHHHHHHHHHHHTC----EECTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGGGGGG
T ss_pred             CcceEEecCCccEeccHHHHHHHHHHhCc----cccCCceEEEEeccccCCCCceEEEECCEEEEEChHHeEeeccCcee
Confidence            34689999999999999777765321100    000011111 1111  112356777777666543  122111     


Q ss_pred             --------------------CCccEEecchHHHhcCCeEEEeeCCEEEEee
Q 045527          218 --------------------GITDIIMGIHWLKTLGATHINWKTHSMKFNT  248 (258)
Q Consensus       218 --------------------~~~dvILG~dwL~~~~~i~ID~~~~~v~f~~  248 (258)
                                          ....+|||..||+.+- +..|+.+++|.|..
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~ILG~~fl~~~y-vvfD~~~~~iGfA~  331 (340)
T d1wkra_         282 IGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFY-SVYDTTNKRLGLAT  331 (340)
T ss_dssp             GTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEE-EEEETTTTEEEEEE
T ss_pred             ecCccceEEEEEecccCCCCCCCCEEechHHhCCEE-EEEECCCCEEEEEE
Confidence                                1235799999999998 58999999999864


No 17 
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]}
Probab=95.60  E-value=0.0099  Score=49.54  Aligned_cols=96  Identities=9%  Similarity=0.008  Sum_probs=57.0

Q ss_pred             EEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeeccccc-ccccceEeeeeEeeeceeEEeec--------------
Q 045527          148 KVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSA-TKAQGICRGVGLILQGVEIVEDF--------------  212 (258)
Q Consensus       148 ~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~-~~~~~~~~~v~i~i~g~~~~~~f--------------  212 (258)
                      ...++||||++..++...+++.+--....   .......+.. ..+....+.+.+.++|..+.+..              
T Consensus       208 ~~~~ivDSGts~~~lp~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~i~f~f~g~~~~ip~~~~~~~~~~~~~C~  284 (323)
T d1izea_         208 SITGIADTGTTLLLLDDSIVDAYYEQVNG---ASYDSSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFADVGNGQTF  284 (323)
T ss_dssp             CEEEEECTTCCSEEECHHHHHHHHTTSTT---CEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEECSTTEEE
T ss_pred             CceEEeccCCccccCCHHHHHHHHHHcCC---ccccCCCCcEEeecccCCceEEEEECCEEEEcChHHEEEEeCCCCEEE
Confidence            45789999999999999998876432211   1111111111 11111113455666665544321              


Q ss_pred             -cccCCCCc-cEEecchHHHhcCCeEEEeeCCEEEEe
Q 045527          213 -LPLDLGIT-DIIMGIHWLKTLGATHINWKTHSMKFN  247 (258)
Q Consensus       213 -~Vl~~~~~-dvILG~dwL~~~~~i~ID~~~~~v~f~  247 (258)
                       .+.+..+. ..|||..||+.+- ++.|+.+++|-|.
T Consensus       285 ~~i~~~~~~~~~iLG~~flr~~y-~vfD~~~~~IGfA  320 (323)
T d1izea_         285 GGIQSNSGIGFSIFGDVFLKSQY-VVFDASGPRLGFA  320 (323)
T ss_dssp             ESEEECTTTSSEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred             EEEECCCCCCCEEECHHHhCCEE-EEEECCCCEEEEc
Confidence             11122222 3699999999999 5999999999885


No 18 
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]}
Probab=95.41  E-value=0.032  Score=46.79  Aligned_cols=96  Identities=15%  Similarity=0.068  Sum_probs=55.9

Q ss_pred             EEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccc-cccccceEeeeeEeeeceeEEeec--c-----------
Q 045527          148 KVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGS-ATKAQGICRGVGLILQGVEIVEDF--L-----------  213 (258)
Q Consensus       148 ~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~-~~~~~~~~~~v~i~i~g~~~~~~f--~-----------  213 (258)
                      ...+|||||++..++...+++.+--....   .....-.|. .+.|....+.+.+.++|..+.+..  +           
T Consensus       213 ~~~~iiDSGts~~~lp~~~~~~i~~~~~~---~~~~~~~~~~~~~C~~~~P~i~f~f~g~~~~lp~~~~~~~~~~~~~~~  289 (330)
T d1oewa_         213 SIDGIADTGTTLLYLPATVVSAYWAQVSG---AKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSS  289 (330)
T ss_dssp             EEEEEECTTCCSEEECHHHHHHHHTTSTT---CEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSE
T ss_pred             CcceeeccccccccCCHHHHHHHHHHccC---cccCcccceEEecccCCCCcEEEEECCEEEecCHHHeeEEEecCCCCE
Confidence            45789999999999999999887432210   000001111 112222223556666666554421  1           


Q ss_pred             ----ccCCCCcc-EEecchHHHhcCCeEEEe-eCCEEEEe
Q 045527          214 ----PLDLGITD-IIMGIHWLKTLGATHINW-KTHSMKFN  247 (258)
Q Consensus       214 ----Vl~~~~~d-vILG~dwL~~~~~i~ID~-~~~~v~f~  247 (258)
                          +....+.+ .|||..||+.+- ++.|+ .+.+|-|.
T Consensus       290 C~~~i~~~~~~~~~ILG~~flr~~y-~vfD~~~~~~IGfA  328 (330)
T d1oewa_         290 CFGGIQSSAGIGINIFGDVALKAAF-VVFNGATTPTLGFA  328 (330)
T ss_dssp             EEESEEESTTTSSEEECHHHHTTEE-EEEECSSSCEEEEE
T ss_pred             EEEEEECCCCCCCEEECHHHhCCEE-EEEECCCCCEEEEe
Confidence                11112223 689999999999 58998 45578775


No 19 
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]}
Probab=94.92  E-value=0.056  Score=44.54  Aligned_cols=97  Identities=12%  Similarity=0.149  Sum_probs=57.0

Q ss_pred             EEEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccccccc--cceEeeeeEeeeceeEEee-------------
Q 045527          147 KKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKA--QGICRGVGLILQGVEIVED-------------  211 (258)
Q Consensus       147 ~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~~~--~~~~~~v~i~i~g~~~~~~-------------  211 (258)
                      ....++||||++..++...+++++--.....    .....+....+  ....+.+.+.+++..+.+.             
T Consensus       207 ~~~~~~iDSGt~~~~lp~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~p~~~f~~~g~~~~i~p~~y~~~~~~~~~  282 (329)
T d2bjua1         207 EKANCIVDSGTSAITVPTDFLNKMLQNLDVI----KVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIEDVGP  282 (329)
T ss_dssp             EEEEEEECTTCCSEEECHHHHHHHTTTSSCE----ECTTSSCEEEETTCTTCCCEEEECSSCEEEECHHHHEEECTTTST
T ss_pred             cCCcccccccccceeCCHHHHHHHHHHhCCe----ecCCCCeeEeecccCCCCceeEEeCCEEEEECHHHhEEEeecCCC
Confidence            3568999999999999999999874332111    00000110100  0111233444444433321             


Q ss_pred             ------ccccCCCCccEEecchHHHhcCCeEEEeeCCEEEEee
Q 045527          212 ------FLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNT  248 (258)
Q Consensus       212 ------f~Vl~~~~~dvILG~dwL~~~~~i~ID~~~~~v~f~~  248 (258)
                            +...+......|||..||+.+. +..|+.+++|.|..
T Consensus       283 ~~C~~~i~~~~~~~~~~IlG~~fl~~~y-~vfD~~~~~iGfA~  324 (329)
T d2bjua1         283 GLCMLNIIGLDFPVPTFILGDPFMRKYF-TVFDYDNHSVGIAL  324 (329)
T ss_dssp             TEEEECEEECCCSSCEEEECHHHHHHEE-EEEETTTTEEEEEE
T ss_pred             CEEEEEEEECCCCCCCEEEchHhhCcEE-EEEECCCCEEEEEE
Confidence                  1112222334699999999999 69999999999874


No 20 
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]}
Probab=94.91  E-value=0.072  Score=45.04  Aligned_cols=105  Identities=16%  Similarity=0.220  Sum_probs=60.4

Q ss_pred             eEEEEEEECCE---EEEEEEcCCCCccccCHHHHHHcC----CCcccCCCceEeecccccccccceEeeeeEeeeceeEE
Q 045527          137 TLKLASEINNK---KVVVLTDSGASHNFISNEVVLVLK----LPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIV  209 (258)
Q Consensus       137 ~i~i~~~I~g~---~v~aLIDSGAt~sfIs~~~a~~l~----l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~  209 (258)
                      .+.+.+.+++.   ...++||||++..++....++++-    ..........+...+-      ...+.+.+.++|..+.
T Consensus       240 ~i~l~~~~~~~~~~~~~~iiDTGTs~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~------~~~P~itf~f~g~~~~  313 (373)
T d1miqa_         240 QIDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDN------KEMPTLEFKSANNTYT  313 (373)
T ss_dssp             EEEEEEEETTEEEEEEEEEECTTBSSEEECHHHHHHHHHHHTCEECTTSSCEEEETTC------TTCCCEEEECSSCEEE
T ss_pred             EEEEEEEECcEecCCcceEeccCCceeccCHHHHHHHHHHhCCeeccCCCeeEecccc------CCCceEEEEECCEEEE
Confidence            34455555553   567999999999999998777652    2111111100100000      1113444555554443


Q ss_pred             ee-------------------ccccCCCCccEEecchHHHhcCCeEEEeeCCEEEEee
Q 045527          210 ED-------------------FLPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFNT  248 (258)
Q Consensus       210 ~~-------------------f~Vl~~~~~dvILG~dwL~~~~~i~ID~~~~~v~f~~  248 (258)
                      +.                   |...+......|||..||+.+- +..|+.+++|-|..
T Consensus       314 l~p~~y~~~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~y-~vfD~~~~rIGfA~  370 (373)
T d1miqa_         314 LEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYF-TVFDYDKESVGFAI  370 (373)
T ss_dssp             ECGGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEE-EEEETTTTEEEEEE
T ss_pred             ECHHHeeEEEEeCCCCEEEEEEEECCCCCCCEEEcHHhhCcEE-EEEECCCCEEEEEE
Confidence            22                   1112222223699999999999 59999999998864


No 21 
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.67  E-value=0.021  Score=47.04  Aligned_cols=95  Identities=11%  Similarity=0.018  Sum_probs=54.4

Q ss_pred             EEEEEEcCCCCccccCHHHHHHcCCCcccC--CCceEeecccccccccceEeeeeEeeeceeEEee-------------c
Q 045527          148 KVVVLTDSGASHNFISNEVVLVLKLPITNT--EPYGVILRTGSATKAQGICRGVGLILQGVEIVED-------------F  212 (258)
Q Consensus       148 ~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~--~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~~~-------------f  212 (258)
                      ...++||||++..++...+++.+--.....  ........ ...   ....+.+.+.++|..+.+.             +
T Consensus       210 ~~~~iiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~-~~~---~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~c~~  285 (323)
T d3cmsa_         210 GCQAILDTGTSKLVGPSSDILNIQQAIGATQNQYGEFDID-CDN---LSYMPTVVFEINGKMYPLTPSAYTSQDQGFCTS  285 (323)
T ss_dssp             CEEEEECTTCCSEEECHHHHHHHHHHHTCEEETTTEEEEC-TTC---TTTSCCEEEEETTEEEEECHHHHEEEETTEEEE
T ss_pred             CeeEEEecCcceEEecHHHHHHHHHHhCceeccCCceeEe-ccc---cCCCCeEEEEECCEEEEECHHHeEEcCCCEEEE
Confidence            357999999999999999888763221110  00000000 000   0011234555555444322             1


Q ss_pred             cccCCCCc-cEEecchHHHhcCCeEEEeeCCEEEEe
Q 045527          213 LPLDLGIT-DIIMGIHWLKTLGATHINWKTHSMKFN  247 (258)
Q Consensus       213 ~Vl~~~~~-dvILG~dwL~~~~~i~ID~~~~~v~f~  247 (258)
                      .+.+.... ..|||..||+.+. +..|+.+.+|.|.
T Consensus       286 ~i~~~~~~~~~iLG~~~l~~~y-vvfD~~~~~igfa  320 (323)
T d3cmsa_         286 GFQSENHSQKWILGDVFIREYY-SVFDRANNLVGLA  320 (323)
T ss_dssp             SEEEC---CCEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred             EEEeCCCCCCEEEcHHhhCcEE-EEEECCCCEEEEE
Confidence            12222222 4799999999999 6999999999885


No 22 
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=94.53  E-value=0.048  Score=45.79  Aligned_cols=98  Identities=13%  Similarity=0.128  Sum_probs=54.4

Q ss_pred             EEECCEE----EEEEEcCCCCccccCHHHHHHcC----CCcccCCCceEeecccccccccceEeeeeEeee-ceeEEee-
Q 045527          142 SEINNKK----VVVLTDSGASHNFISNEVVLVLK----LPITNTEPYGVILRTGSATKAQGICRGVGLILQ-GVEIVED-  211 (258)
Q Consensus       142 ~~I~g~~----v~aLIDSGAt~sfIs~~~a~~l~----l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~-g~~~~~~-  211 (258)
                      +.|++..    ..++||||++..++..++++++-    ........ ...      +.+......+.+.++ |..+.+. 
T Consensus       202 i~v~g~~~~~~~~aiiDSGt~~~~lp~~~~~~l~~~~~~~~~~~~~-~~~------~~~~~~~p~i~f~f~~g~~~~i~~  274 (334)
T d1j71a_         202 INFDGTSVSTNADVVLDSGTTITYFSQSTADKFARIVGATWDSRNE-IYR------LPSCDLSGDAVFNFDQGVKITVPL  274 (334)
T ss_dssp             EEETTEEEEEEEEEEECTTCSSEEECHHHHHHHHHHHTCEEETTTT-EEE------CSSSCCCSEEEEEESTTCEEEEEG
T ss_pred             EEECCEEecccccccccCCCcceeccHHHHHHHHHHhCCEEcCCCC-eee------ccccccCCCceEEeCCCEEEEECh
Confidence            3455554    45999999999999999888762    11111000 000      000001122333332 3333221 


Q ss_pred             -ccccCC----------C-CccEEecchHHHhcCCeEEEeeCCEEEEe
Q 045527          212 -FLPLDL----------G-ITDIIMGIHWLKTLGATHINWKTHSMKFN  247 (258)
Q Consensus       212 -f~Vl~~----------~-~~dvILG~dwL~~~~~i~ID~~~~~v~f~  247 (258)
                       .++++.          . .-..|||..||+.+- +..|+.+++|.|.
T Consensus       275 ~~y~~~~~~~~~C~~~i~~~~~~ILG~~fl~~~y-~vfD~~n~~iGfA  321 (334)
T d1j71a_         275 SELILKDSDSSICYFGISRNDANILGDNFLRRAY-IVYDLDDKTISLA  321 (334)
T ss_dssp             GGGEEECSSSSCEEESEEECTTCEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred             HHeEEecCCCCEEEEEecCCCCcEECHHhhCcEE-EEEECCCCEEEEE
Confidence             112111          1 113599999999999 5999999999986


No 23 
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]}
Probab=94.45  E-value=0.013  Score=49.38  Aligned_cols=26  Identities=12%  Similarity=0.245  Sum_probs=23.2

Q ss_pred             EEecchHHHhcCCeEEEeeCCEEEEee
Q 045527          222 IIMGIHWLKTLGATHINWKTHSMKFNT  248 (258)
Q Consensus       222 vILG~dwL~~~~~i~ID~~~~~v~f~~  248 (258)
                      .|||..||+.+- +..|+.+++|.|..
T Consensus       304 ~ILG~~fl~~~y-~vfD~~~~~iGfA~  329 (342)
T d1eaga_         304 NILGDNFLRSAY-IVYDLDDNEISLAQ  329 (342)
T ss_dssp             CEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred             cEECHHhhCcEE-EEEECCCCEEEEEE
Confidence            389999999999 59999999999853


No 24 
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]}
Probab=94.32  E-value=0.028  Score=46.59  Aligned_cols=93  Identities=12%  Similarity=0.079  Sum_probs=54.0

Q ss_pred             EEEEEEEcCCCCccccCHHHHHHc----CCCcccCCCceEeecccccccccceEeeeeEeeeceeEEee-----------
Q 045527          147 KKVVVLTDSGASHNFISNEVVLVL----KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVED-----------  211 (258)
Q Consensus       147 ~~v~aLIDSGAt~sfIs~~~a~~l----~l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~~~-----------  211 (258)
                      ....++||||++..++...++.++    +.....   .........    ....+.+.+.++|..+.+.           
T Consensus       207 ~~~~~iiDsGts~~~lp~~~~~~l~~~i~~~~~~---~~~~~~~~~----~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~  279 (324)
T d1am5a_         207 EGCQAIVDTGTSKIVAPVSALANIMKDIGASENQ---GEMMGNCAS----VQSLPDITFTINGVKQPLPPSAYIEGDQAF  279 (324)
T ss_dssp             CCEEEEECTTCSSEEECTTTHHHHHHHHTCEECC---CCEECCTTS----SSSSCCEEEEETTEEEEECHHHHEEESSSC
T ss_pred             CCcceeeccCcccccCCHHHHHHHHHHhCCcccC---Ccccccccc----cccCCceEEEECCEEEEECHHHhEecCCCe
Confidence            345789999999999999877654    221110   000000000    0112345555555544332           


Q ss_pred             ----ccccC--CC-CccEEecchHHHhcCCeEEEeeCCEEEEe
Q 045527          212 ----FLPLD--LG-ITDIIMGIHWLKTLGATHINWKTHSMKFN  247 (258)
Q Consensus       212 ----f~Vl~--~~-~~dvILG~dwL~~~~~i~ID~~~~~v~f~  247 (258)
                          +.-++  .. ..-.|||..||+.+- +..|+.+++|.|.
T Consensus       280 c~~~i~~~~~~~~~~~~~ILG~~fl~~~y-~vfD~~~~~igfA  321 (324)
T d1am5a_         280 CTSGLGSSGVPSNTSELWIFGDVFLRNYY-TIYDRTNNKVGFA  321 (324)
T ss_dssp             EEECEEECCSCCSSSCEEEECHHHHHHEE-EEEETTTTEEEEE
T ss_pred             EEEEEEecCcCCCCCCCEEECHHhhcCEE-EEEECCCCEEEEE
Confidence                11111  11 223589999999999 6999999999885


No 25 
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]}
Probab=94.06  E-value=0.054  Score=45.88  Aligned_cols=28  Identities=11%  Similarity=0.280  Sum_probs=24.9

Q ss_pred             ccEEecchHHHhcCCeEEEeeCCEEEEee
Q 045527          220 TDIIMGIHWLKTLGATHINWKTHSMKFNT  248 (258)
Q Consensus       220 ~dvILG~dwL~~~~~i~ID~~~~~v~f~~  248 (258)
                      ...|||..||+.+- +..|..+++|.|..
T Consensus       344 ~~~ILG~~flr~~y-~vfD~~~~~IGfA~  371 (381)
T d1t6ex_         344 PAVILGGAQMEDFV-LDFDMEKKRLGFSR  371 (381)
T ss_dssp             CSEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred             CcEEECHHHhCcEE-EEEECCCCEEEEEE
Confidence            46899999999999 59999999998864


No 26 
>g1htr.1 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens), progastricsin (pepsinogen C) [TaxId: 9606]}
Probab=93.74  E-value=0.04  Score=46.88  Aligned_cols=93  Identities=16%  Similarity=0.164  Sum_probs=55.1

Q ss_pred             EEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccc-ccccc--ceEeeeeEeeeceeEEee--ccccCC------
Q 045527          149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGS-ATKAQ--GICRGVGLILQGVEIVED--FLPLDL------  217 (258)
Q Consensus       149 v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~-~~~~~--~~~~~v~i~i~g~~~~~~--f~Vl~~------  217 (258)
                      ..++||||++..++..++++.+--......     ...|. .+.+.  ...+.+.+.++|..+.+.  -++++.      
T Consensus       255 ~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~-----~~~~~~~~~C~~~~~~P~i~f~f~g~~~~l~~~~yi~~~~~~c~~  329 (372)
T g1htr.1         255 CQAIVDTGTSLLTVPQQYMSALLQATGAQE-----DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNNGYCTV  329 (372)
T ss_dssp             EEEEECTTCCSEEEEGGGHHHHHHHHTCEE-----CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECSSCEEE
T ss_pred             ceEEEeCCCCcEEccHHHHHHHHHHhCCee-----ccCCcEEeeccccCcCCcEEEEECCEEEEECHHHeEEecCCEEEE
Confidence            569999999999999988887622111100     00011 01111  011345566666555432  122211      


Q ss_pred             ----------CCcc-EEecchHHHhcCCeEEEeeCCEEEEe
Q 045527          218 ----------GITD-IIMGIHWLKTLGATHINWKTHSMKFN  247 (258)
Q Consensus       218 ----------~~~d-vILG~dwL~~~~~i~ID~~~~~v~f~  247 (258)
                                .+.+ .|||..||+.+. +..|+.+++|.|.
T Consensus       330 ~i~~~~~~~~~~~~~~ILG~~fl~~~y-~vfD~~~~~iGfA  369 (372)
T g1htr.1         330 GVEPTYLSSQNGQPLWILGDVFLRSYY-SVYDLGNNRVGFA  369 (372)
T ss_dssp             SEEEECCCCTTSSCEEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred             EEEecccCCCCCCccEEEcHHhhCCEE-EEEECCCCEEEEE
Confidence                      1123 499999999999 6999999999885


No 27 
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]}
Probab=93.72  E-value=0.093  Score=43.30  Aligned_cols=94  Identities=10%  Similarity=0.049  Sum_probs=54.1

Q ss_pred             EEEEEcCCCCccccCHHHHHHcCCCccc--CCCceEeecccccccccceEeeeeEeeeceeEEeec-------------c
Q 045527          149 VVVLTDSGASHNFISNEVVLVLKLPITN--TEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDF-------------L  213 (258)
Q Consensus       149 v~aLIDSGAt~sfIs~~~a~~l~l~~~~--~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~~~f-------------~  213 (258)
                      ..++||||++..++...+++++.-....  .......+....    ....+.+.+.++|..+.+..             .
T Consensus       213 ~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~c~~----~~~~P~i~f~f~g~~~~l~p~~y~~~~~~~c~~~  288 (329)
T d1dpja_         213 HGAAIDTGTSLITLPSGLAEMINAEIGAKKGWTGQYTLDCNT----RDNLPDLIFNFNGYNFTIGPYDYTLEVSGSCISA  288 (329)
T ss_dssp             CEEEECTTCSCEEECHHHHHHHHHHHTCEECTTSSEEECGGG----GGGCCCEEEEETTEEEEECTTTSEEEETTEEEEC
T ss_pred             cccccCcccceeeCCHHHHHHHHHHhCCccccceeEEEeccc----cCccceEEEEECCEEEEECHHHeEEecCCcEEEE
Confidence            3589999999999999888876322210  000001111100    00113445555555444321             1


Q ss_pred             ccC--C--CCcc-EEecchHHHhcCCeEEEeeCCEEEEe
Q 045527          214 PLD--L--GITD-IIMGIHWLKTLGATHINWKTHSMKFN  247 (258)
Q Consensus       214 Vl~--~--~~~d-vILG~dwL~~~~~i~ID~~~~~v~f~  247 (258)
                      +..  .  ...+ .|||..||+.+- +..|+.+++|.|.
T Consensus       289 ~~~~~~~~~~~~~~iLG~~fl~~~y-~vfD~~~~~igfA  326 (329)
T d1dpja_         289 ITPMDFPEPVGPLAIVGDAFLRKYY-SIYDLGNNAVGLA  326 (329)
T ss_dssp             EEECCCCTTTCSEEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred             EEECccCCCCCCcEEEcHHhhCcEE-EEEECCCCEEEEE
Confidence            111  1  1112 699999999999 5999999999885


No 28 
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=93.26  E-value=0.082  Score=43.44  Aligned_cols=93  Identities=15%  Similarity=0.128  Sum_probs=55.3

Q ss_pred             EEEEEEcCCCCccccCHHHHHHc----CCCcccCCCceEeecccccccccceEeeeeEeeeceeEEeec--c--------
Q 045527          148 KVVVLTDSGASHNFISNEVVLVL----KLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDF--L--------  213 (258)
Q Consensus       148 ~v~aLIDSGAt~sfIs~~~a~~l----~l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~~~f--~--------  213 (258)
                      ...++||||.+..++...+...+    +..........+.  ...    ....+.+.+.++|..+.+..  +        
T Consensus       216 ~~~~iiDtgt~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~--~~~----~~~~p~itf~f~g~~~~l~~~~~~~~~~~~~  289 (337)
T d1qdma2         216 GCAAIADSGTSLLAGPTAIITEINEKIGAAGSPMGESAVD--CGS----LGSMPDIEFTIGGKKFALKPEEYILKVGEGA  289 (337)
T ss_dssp             CEEEEECSSCCSEEECHHHHHHHHHHHTCCCCSSSCCEEC--GGG----GTTCCCEEEEETTEEEEECHHHHEEECSCGG
T ss_pred             CceEEeeccCcceecchHHHHHHHHHhccccccCCccccc--ccc----cCCCCceEEEECCEEEEEChHHeEEEeccCC
Confidence            46799999999999999777665    2222111111111  110    01123445555555544321  0        


Q ss_pred             -------c--cC---CCCccEEecchHHHhcCCeEEEeeCCEEEEe
Q 045527          214 -------P--LD---LGITDIIMGIHWLKTLGATHINWKTHSMKFN  247 (258)
Q Consensus       214 -------V--l~---~~~~dvILG~dwL~~~~~i~ID~~~~~v~f~  247 (258)
                             +  ++   ......|||..||+.+. +..|+.+++|.|.
T Consensus       290 ~~~C~~~i~~~~~~~~~~~~~IlG~~fl~~~y-~vfD~~~~~igfA  334 (337)
T d1qdma2         290 AAQCISGFTAMDIPPPRGPLWILGDVFMGPYH-TVFDYGKLRIGFA  334 (337)
T ss_dssp             GCCEEESEEECCCCTTSCSEEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred             CCEEEEEEEecCcCCCCCCcEEEhHHhhcCEE-EEEECCCCEEEEE
Confidence                   1  11   12235799999999999 6999999999885


No 29 
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.26  E-value=0.14  Score=42.42  Aligned_cols=94  Identities=14%  Similarity=0.153  Sum_probs=56.2

Q ss_pred             EEEEEEcCCCCccccCHHHHHHcCCCc----ccCCCceEeecccccccccceEeeeeEeeeceeEEeec--cccC-----
Q 045527          148 KVVVLTDSGASHNFISNEVVLVLKLPI----TNTEPYGVILRTGSATKAQGICRGVGLILQGVEIVEDF--LPLD-----  216 (258)
Q Consensus       148 ~v~aLIDSGAt~sfIs~~~a~~l~l~~----~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~~~f--~Vl~-----  216 (258)
                      ...++||||++..++...+++.+--..    .......+.   ..   .....+.+.+.++|..+.+..  +++.     
T Consensus       214 ~~~~iiDSGtt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~---c~---~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~  287 (335)
T d1smra_         214 GCEVVVDTGSSFISAPTSSLKLIMQALGAKEKRLHEYVVS---CS---QVPTLPDISFNLGGRAYTLSSTDYVLQYPNRR  287 (335)
T ss_dssp             CEEEEECTTBSSEEECHHHHHHHHHHHTCEEEETTEEEEE---GG---GGGGSCCEEEEETTEEEEECHHHHBTT----C
T ss_pred             CceEEEeCCCCcccCCHHHHHHHHHHhCCeeccCCceeec---cc---ccCCCCccEEEECCeEEEEChHHeEEEeccCC
Confidence            357899999999999999888763211    100000000   00   001113456666666554431  1111     


Q ss_pred             ---------------CCCccEEecchHHHhcCCeEEEeeCCEEEEee
Q 045527          217 ---------------LGITDIIMGIHWLKTLGATHINWKTHSMKFNT  248 (258)
Q Consensus       217 ---------------~~~~dvILG~dwL~~~~~i~ID~~~~~v~f~~  248 (258)
                                     ..+-..|||..||+.+- +..|+.+.+|.|..
T Consensus       288 ~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y-vvfD~~~~~iGfA~  333 (335)
T d1smra_         288 DKLCTVALHAMDIPPPTGPVWVLGATFIRKFY-TEFDRHNNRIGFAL  333 (335)
T ss_dssp             CCEEEBSEEECCCCTTTCSCEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred             CCEEEEEEEecCcCCCCCCcEEECHHHhCcEE-EEEECCCCEEEEEE
Confidence                           01112699999999999 59999999998863


No 30 
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.86  E-value=0.091  Score=43.53  Aligned_cols=94  Identities=15%  Similarity=0.117  Sum_probs=56.6

Q ss_pred             EEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeeccccccccc--ceEeeeeEeeeceeEEeec--cccCC-------
Q 045527          149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQ--GICRGVGLILQGVEIVEDF--LPLDL-------  217 (258)
Q Consensus       149 v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~~~~--~~~~~v~i~i~g~~~~~~f--~Vl~~-------  217 (258)
                      ..++||||++..++-..+++.+--.+...    .. ..+-...+.  ...+.+.+.++|..+.+..  ++++.       
T Consensus       218 ~~~iiDSGtt~~~lp~~~~~~l~~~~~~~----~~-~~~~~~~c~~~~~~P~l~f~f~g~~~~l~p~~yl~~~~~~~~~~  292 (337)
T d1hrna_         218 CLALVDTGASYISGSTSSIEKLMEALGAK----KR-LFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKL  292 (337)
T ss_dssp             EEEEECTTCSSEEECHHHHHHHHHHHTCE----EC-SSCEEEETTTGGGCCCEEEEETTEEEEECHHHHBCCCCCCTTSE
T ss_pred             cceEEeCCCcceeccHHHHHHHHHHhCCc----cc-ccceeeeccccCCCCceeEEECCEEEEEChHHeEEEecCCCCCE
Confidence            46899999999999998887762211100    00 001111111  1124566777777665531  22211       


Q ss_pred             -------------CCccEEecchHHHhcCCeEEEeeCCEEEEee
Q 045527          218 -------------GITDIIMGIHWLKTLGATHINWKTHSMKFNT  248 (258)
Q Consensus       218 -------------~~~dvILG~dwL~~~~~i~ID~~~~~v~f~~  248 (258)
                                   ..-..|||..||+.+- +..|+.+++|-|..
T Consensus       293 C~~~i~~~~~~~~~~~~~ILG~~fl~~~y-~vfD~~~~~IGfA~  335 (337)
T d1hrna_         293 CTLAIHAMDIPPPTGPTWALGATFIRKFY-TEFDRRNNRIGFAL  335 (337)
T ss_dssp             EEBSEEECCCCTTTCSCEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred             EEEEEEcCCcCCCCCCCEEECHHhhCCEE-EEEECCCCEEEEEE
Confidence                         0112499999999998 59999999998863


No 31 
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]}
Probab=92.84  E-value=0.17  Score=41.89  Aligned_cols=97  Identities=10%  Similarity=0.061  Sum_probs=55.7

Q ss_pred             EEECCEE----EEEEEcCCCCccccCHHHHHHc----CCCcccCCCceEeeccccccccc-ceEeeeeEeeeceeEEeec
Q 045527          142 SEINNKK----VVVLTDSGASHNFISNEVVLVL----KLPITNTEPYGVILRTGSATKAQ-GICRGVGLILQGVEIVEDF  212 (258)
Q Consensus       142 ~~I~g~~----v~aLIDSGAt~sfIs~~~a~~l----~l~~~~~~~~~V~~a~G~~~~~~-~~~~~v~i~i~g~~~~~~f  212 (258)
                      +.+++..    ..++||||++..++..++++++    +........+.+.        +. .....+.+.++|..+.+.-
T Consensus       202 i~i~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~--------C~~~~~p~i~f~f~g~~~~i~~  273 (325)
T d2apra_         202 ATVGTSTVASSFDGILDTGTTLLILPNNIAASVARAYGASDNGDGTYTIS--------CDTSAFKPLVFSINGASFQVSP  273 (325)
T ss_dssp             EEETTEEEECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSSSCEEEC--------SCGGGCCCEEEEETTEEEEECG
T ss_pred             EEECCEeecceeeeeccCCCccccCCHHHHHHHHHHhCCcccCCCceeec--------ccCCCCCcEEEEECCEEEEECh
Confidence            3455543    3699999999999999887765    2211111111111        10 0012344444444443221


Q ss_pred             --------------cccCCCCccEEecchHHHhcCCeEEEeeCCEEEEe
Q 045527          213 --------------LPLDLGITDIIMGIHWLKTLGATHINWKTHSMKFN  247 (258)
Q Consensus       213 --------------~Vl~~~~~dvILG~dwL~~~~~i~ID~~~~~v~f~  247 (258)
                                    .+.+...-..|||..||+.+- +..|..+++|.|.
T Consensus       274 ~~y~~~~~~~~C~~~i~~~~~~~~iLG~~flr~~y-~vfD~~~~~IGfA  321 (325)
T d2apra_         274 DSLVFEEFQGQCIAGFGYGNWGFAIIGDTFLKNNY-VVFNQGVPEVQIA  321 (325)
T ss_dssp             GGGEEEEETTEEEESEEEESSSSEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred             HHeEEecCCCEEEEEEccCCCCCEEECHHHhCcEE-EEEECCCCEEeEE
Confidence                          111111223799999999999 5999999999885


No 32 
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=92.68  E-value=0.18  Score=42.61  Aligned_cols=93  Identities=13%  Similarity=0.119  Sum_probs=57.5

Q ss_pred             EEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeeccccc-cccc--ceEeeeeEeeeceeEEeec--ccc--------
Q 045527          149 VVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSA-TKAQ--GICRGVGLILQGVEIVEDF--LPL--------  215 (258)
Q Consensus       149 v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~-~~~~--~~~~~v~i~i~g~~~~~~f--~Vl--------  215 (258)
                      ..++||||++..++...+++.+.-.+...     ...+|.. +.+.  ...+.+.+.++|..+.+..  +++        
T Consensus       254 ~~aiiDSGTs~~~lp~~~~~~i~~~l~~~-----~~~~~~~~~~C~~~~~~P~l~f~f~g~~~~l~~~~yi~~~~~~c~~  328 (370)
T d3psga_         254 CQAIVDTGTSLLTGPTSAIANIQSDIGAS-----ENSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQDDDSCTS  328 (370)
T ss_dssp             EEEEECTTCCSEEEEHHHHHHHHHHTTCE-----ECTTCCEECCGGGGGGCCCEEEEETTEEEEECHHHHEEECSSCEEE
T ss_pred             ccEEEecCCceEeCCHHHHHHHHHHhCCe-----eecCCcEEEeccccCCCceEEEEECCEEEEEChHHeEEEcCCeEEE
Confidence            57999999999999999888763221110     0111211 1111  1124566777776665431  111        


Q ss_pred             -----CC--C-CccEEecchHHHhcCCeEEEeeCCEEEEe
Q 045527          216 -----DL--G-ITDIIMGIHWLKTLGATHINWKTHSMKFN  247 (258)
Q Consensus       216 -----~~--~-~~dvILG~dwL~~~~~i~ID~~~~~v~f~  247 (258)
                           +.  . +.-.|||..||+.+- +..|+.+.+|-|.
T Consensus       329 ~~~~~~~~~~~~~~~ILG~~flr~~y-~vfD~~~~~IGfA  367 (370)
T d3psga_         329 GFEGMDVPTSSGELWILGDVFIRQYY-TVFDRANNKVGLA  367 (370)
T ss_dssp             SEEEECCCTTSCCEEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred             EEEEcccCCCCCCcEEECHHhhcCEE-EEEECCCCEEEEE
Confidence                 11  1 123799999999999 5999999999885


No 33 
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]}
Probab=88.77  E-value=0.42  Score=39.70  Aligned_cols=33  Identities=18%  Similarity=0.303  Sum_probs=26.4

Q ss_pred             cCCCCccEEecchHHHhcCCeEEEeeCCEEEEee
Q 045527          215 LDLGITDIIMGIHWLKTLGATHINWKTHSMKFNT  248 (258)
Q Consensus       215 l~~~~~dvILG~dwL~~~~~i~ID~~~~~v~f~~  248 (258)
                      .+......|||..||+.+- +..|+.+++|.|..
T Consensus       317 ~~~~~~~~ILG~~fl~~~y-vvfD~~~~~iGfA~  349 (357)
T d1mppa_         317 LPDGGNQFIVGNLFLRFFV-NVYDFGKNRIGFAP  349 (357)
T ss_dssp             EEESSSCCEEEHHHHTTEE-EEEETTTTEEEEEE
T ss_pred             cCCCCCCEEechHHhCCEE-EEEECCCCEEEEEE
Confidence            3333345799999999999 68999999999863


No 34 
>g1b5f.1 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin {Cynara cardunculus [TaxId: 4265]}
Probab=88.76  E-value=0.56  Score=38.03  Aligned_cols=26  Identities=15%  Similarity=0.308  Sum_probs=23.3

Q ss_pred             EEecchHHHhcCCeEEEeeCCEEEEee
Q 045527          222 IIMGIHWLKTLGATHINWKTHSMKFNT  248 (258)
Q Consensus       222 vILG~dwL~~~~~i~ID~~~~~v~f~~  248 (258)
                      .|||..||+.+. +..|+.+++|.|..
T Consensus       299 ~ilG~~fl~~~y-vvfD~~~~~igfA~  324 (326)
T g1b5f.1         299 WILGDVFMRPYH-TVFDYGNLLVGFAE  324 (326)
T ss_dssp             EEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred             EEECHHHhCCEE-EEEECCCCEEEEEE
Confidence            589999999999 69999999998853


No 35 
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.46  E-value=0.64  Score=39.07  Aligned_cols=30  Identities=13%  Similarity=0.200  Sum_probs=25.8

Q ss_pred             CccEEecchHHHhcCCeEEEeeCCEEEEeeC
Q 045527          219 ITDIIMGIHWLKTLGATHINWKTHSMKFNTR  249 (258)
Q Consensus       219 ~~dvILG~dwL~~~~~i~ID~~~~~v~f~~~  249 (258)
                      ....|||..||+.+- +..|+.+++|-|...
T Consensus       330 ~~~~ILG~~Flr~~y-~vfD~~~~~IGfA~a  359 (387)
T d2qp8a1         330 STGTVMGAVIMEGFY-VVFDRARKRIGFAVS  359 (387)
T ss_dssp             SSCEEECHHHHTTEE-EEEETTTTEEEEEEE
T ss_pred             CCCEEEhHHhhCcEE-EEEECCCCEEEEEEC
Confidence            346799999999999 599999999998753


No 36 
>g1lya.1 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.01  E-value=0.55  Score=38.11  Aligned_cols=95  Identities=18%  Similarity=0.124  Sum_probs=55.2

Q ss_pred             EEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccccc-cc--cceEeeeeEeeeceeEEeec--ccc-------
Q 045527          148 KVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSAT-KA--QGICRGVGLILQGVEIVEDF--LPL-------  215 (258)
Q Consensus       148 ~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~-~~--~~~~~~v~i~i~g~~~~~~f--~Vl-------  215 (258)
                      ...++||||++..++..++++++--.....     ...++... .+  ....+.+.+.++|..+.+..  +++       
T Consensus       217 ~~~~~iDsgt~~~~lp~~~~~~l~~~l~~~-----~~~~~~~~~~~~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~  291 (338)
T g1lya.1         217 GCEAIVDTGTSLMVGPVDEVRELQKAIGAV-----PLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGK  291 (338)
T ss_dssp             CEEEEECTTCSSEEECHHHHHHHHHHHTCE-----EEETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTS
T ss_pred             CeeEEeecCcceecCCHHHHHHHHHHHhhe-----eccCCceeeeccccCCCceEEEEECCEEEEEChHHeEEEEccCCC
Confidence            346899999999999999988774222110     00011100 00  01113455555555544331  111       


Q ss_pred             ----------CC--CCc-cEEecchHHHhcCCeEEEeeCCEEEEee
Q 045527          216 ----------DL--GIT-DIIMGIHWLKTLGATHINWKTHSMKFNT  248 (258)
Q Consensus       216 ----------~~--~~~-dvILG~dwL~~~~~i~ID~~~~~v~f~~  248 (258)
                                +.  ... ..|||..||+.+. +..|..+++|.|..
T Consensus       292 ~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y-~vfD~~~~~igfa~  336 (338)
T g1lya.1         292 TLCLSGFMGMDIPPPSGPLWILGDVFIGRYY-TVFDRDNNRVGFAE  336 (338)
T ss_dssp             SEEEESEEECCCCTTTCCCEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred             cEEEEEEEecccCCCCCCcEEEhHHhhccEE-EEEECCCCEEEEEE
Confidence                      11  111 2689999999999 69999999998853


No 37 
>d1cl4a_ g.40.1.1 (A:) Nucleocapsid protein from mason-pfizer monkey virus (MPMV) {Mason-pfizer monkey virus [TaxId: 11855]}
Probab=87.05  E-value=0.13  Score=27.75  Aligned_cols=19  Identities=26%  Similarity=0.744  Sum_probs=17.5

Q ss_pred             CcceecCCCccCccccCCc
Q 045527           65 GLCYKCDEKFSPGHRCRKQ   83 (258)
Q Consensus        65 ~lCf~Cg~~gh~~~~Cp~k   83 (258)
                      ++|-+|.+..|-+++|..+
T Consensus         3 ~lCPrC~kG~HWa~~Crsk   21 (32)
T d1cl4a_           3 GLCPRCKRGKHWANECKSK   21 (32)
T ss_dssp             CSCSSCSSCSSCSTTCCCT
T ss_pred             ccCccccCcchHHHHhhhh
Confidence            7999999999999999864


No 38 
>d1dsva_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=84.92  E-value=0.17  Score=27.16  Aligned_cols=20  Identities=25%  Similarity=0.758  Sum_probs=17.8

Q ss_pred             CCcceecCCCccCccccCCc
Q 045527           64 CGLCYKCDEKFSPGHRCRKQ   83 (258)
Q Consensus        64 ~~lCf~Cg~~gh~~~~Cp~k   83 (258)
                      .++|-+|.+..|-+++|..+
T Consensus         2 p~lCPrC~kG~HWa~~Crsk   21 (31)
T d1dsva_           2 PGLCPRCKKGYHWKSECKSK   21 (31)
T ss_dssp             CCBCTTTCSSBSCTTTCCCS
T ss_pred             CccCccccCcchHHHHhhhh
Confidence            37899999999999999864


No 39 
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]}
Probab=67.42  E-value=5  Score=32.43  Aligned_cols=25  Identities=16%  Similarity=0.408  Sum_probs=20.4

Q ss_pred             EEEEEEECC--EEEEEEEcCCCCcccc
Q 045527          138 LKLASEINN--KKVVVLTDSGASHNFI  162 (258)
Q Consensus       138 i~i~~~I~g--~~v~aLIDSGAt~sfI  162 (258)
                      ..+.+.|+.  +++.+++||||+..++
T Consensus        14 Y~~~i~iGtP~Q~~~~i~DTGSs~~wv   40 (340)
T d1wkra_          14 YVVNVGVGSPATTYSLLVDTGSSNTWL   40 (340)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCCEE
T ss_pred             EEEEEEEcCCCeEEEEEEECCCcceEE
Confidence            456777774  8999999999998776


No 40 
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]}
Probab=64.48  E-value=2.9  Score=33.48  Aligned_cols=28  Identities=11%  Similarity=0.170  Sum_probs=23.1

Q ss_pred             eEEEEEEECCEEEEEEEcCCCCccccCH
Q 045527          137 TLKLASEINNKKVVVLTDSGASHNFISN  164 (258)
Q Consensus       137 ~i~i~~~I~g~~v~aLIDSGAt~sfIs~  164 (258)
                      -..+.+.|++.+..++|||||+...|-.
T Consensus        16 ~Y~~~i~vG~~~~~v~~DTGSs~~Wv~~   43 (323)
T d1bxoa_          16 EYITPVTIGGTTLNLNFDTGSADLWVFS   43 (323)
T ss_dssp             CEEEEEEETTEEEEEEEETTCCCEEECB
T ss_pred             EEEEEEEECCccEEEEEECCCcceEEEC
Confidence            3567888999999999999999876644


No 41 
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]}
Probab=63.80  E-value=2.9  Score=33.59  Aligned_cols=26  Identities=8%  Similarity=0.156  Sum_probs=22.5

Q ss_pred             EEEEEEECCEEEEEEEcCCCCccccC
Q 045527          138 LKLASEINNKKVVVLTDSGASHNFIS  163 (258)
Q Consensus       138 i~i~~~I~g~~v~aLIDSGAt~sfIs  163 (258)
                      ..+.+.|+.+++.++|||||+...+-
T Consensus        17 Y~~~i~iG~q~~~l~~DTGSs~~Wv~   42 (323)
T d1izea_          17 YITQVTVGDDTLGLDFDTGSADLWVF   42 (323)
T ss_dssp             EEEEEEETTEEEEEEEETTCCCCEEC
T ss_pred             EEEEEEECCeeEEEEEECCCcceEEE
Confidence            56788999999999999999987763


No 42 
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.14  E-value=6.3  Score=31.55  Aligned_cols=26  Identities=15%  Similarity=0.236  Sum_probs=22.0

Q ss_pred             eEEEEEEEC--CEEEEEEEcCCCCcccc
Q 045527          137 TLKLASEIN--NKKVVVLTDSGASHNFI  162 (258)
Q Consensus       137 ~i~i~~~I~--g~~v~aLIDSGAt~sfI  162 (258)
                      ...+.+.|+  .+++.++|||||+..+|
T Consensus        16 ~Y~~~i~iGtP~Q~~~l~~DTGSs~~Wv   43 (335)
T d1smra_          16 QYYGEIGIGTPPQTFKVIFDTGSANLWV   43 (335)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCEEE
T ss_pred             EEEEEEEECCCCeEEEEEEECCcccEEE
Confidence            456778887  68999999999998877


No 43 
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]}
Probab=46.69  E-value=9.4  Score=30.13  Aligned_cols=28  Identities=11%  Similarity=0.344  Sum_probs=22.3

Q ss_pred             eEEEEEEECC--EEEEEEEcCCCCccccCH
Q 045527          137 TLKLASEINN--KKVVVLTDSGASHNFISN  164 (258)
Q Consensus       137 ~i~i~~~I~g--~~v~aLIDSGAt~sfIs~  164 (258)
                      ...+.+.|+.  +++.+++||||+..++..
T Consensus        15 ~Y~~~v~iGtP~q~~~~~~DTGS~~~Wv~~   44 (329)
T d2bjua1          15 MFYGDAEVGDNQQPFTFILDTGSANLWVPS   44 (329)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred             EEEEEEEECCCCEEEEEEEECCCcceEEEC
Confidence            4566778865  899999999999887743


No 44 
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]}
Probab=46.63  E-value=16  Score=29.25  Aligned_cols=28  Identities=14%  Similarity=0.218  Sum_probs=21.7

Q ss_pred             eEEEEEEECC--EEEEEEEcCCCCccccCH
Q 045527          137 TLKLASEINN--KKVVVLTDSGASHNFISN  164 (258)
Q Consensus       137 ~i~i~~~I~g--~~v~aLIDSGAt~sfIs~  164 (258)
                      ...+.+.|+.  +++.++|||||+..+|-.
T Consensus        16 ~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~   45 (330)
T d1oewa_          16 AYITPVQIGTPAQTLNLDFDTGSSDLWVFS   45 (330)
T ss_dssp             CEEEEEEETTTTEEEEEEEETTCCCEEECB
T ss_pred             EEEEEEEEcCCCeEEEEEEECCccceEEEC
Confidence            3566777754  889999999999887744


No 45 
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=45.73  E-value=9.1  Score=30.87  Aligned_cols=26  Identities=19%  Similarity=0.364  Sum_probs=21.2

Q ss_pred             eEEEEEEECC--EEEEEEEcCCCCcccc
Q 045527          137 TLKLASEINN--KKVVVLTDSGASHNFI  162 (258)
Q Consensus       137 ~i~i~~~I~g--~~v~aLIDSGAt~sfI  162 (258)
                      ...+.+.|+.  +++.++|||||+..+|
T Consensus        13 ~Y~~~i~iGtP~q~~~~i~DTGS~~~Wv   40 (334)
T d1j71a_          13 SYAADIVVGSNQQKQTVVIDTGSSDLWV   40 (334)
T ss_dssp             SEEEEEEETTTTEEEEEEEETTCCCEEE
T ss_pred             EEEEEEEEcCCCeEEEEEEECCCcceEE
Confidence            3466777764  8899999999999887


No 46 
>g1lya.1 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.95  E-value=9.6  Score=30.03  Aligned_cols=27  Identities=19%  Similarity=0.236  Sum_probs=21.8

Q ss_pred             eEEEEEEECC--EEEEEEEcCCCCccccC
Q 045527          137 TLKLASEINN--KKVVVLTDSGASHNFIS  163 (258)
Q Consensus       137 ~i~i~~~I~g--~~v~aLIDSGAt~sfIs  163 (258)
                      ...+.+.|+.  +++.+++||||+..++.
T Consensus        14 ~Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~   42 (338)
T g1lya.1          14 QYYGEIGIGTPPQCFTVVFDTGSSNLWVP   42 (338)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred             EEEEEEEEcCCCeEEEEEEECCCcceEEe
Confidence            3566777775  89999999999998874


No 47 
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=42.89  E-value=11  Score=29.63  Aligned_cols=25  Identities=20%  Similarity=0.315  Sum_probs=20.5

Q ss_pred             EEEEEEECC--EEEEEEEcCCCCcccc
Q 045527          138 LKLASEINN--KKVVVLTDSGASHNFI  162 (258)
Q Consensus       138 i~i~~~I~g--~~v~aLIDSGAt~sfI  162 (258)
                      ..+.+.|+.  +++.++|||||+..+|
T Consensus        17 Y~~~v~iGtP~q~~~l~~DTGS~~~Wv   43 (337)
T d1qdma2          17 YFGEIGVGTPPQKFTVIFDTGSSNLWV   43 (337)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCCEE
T ss_pred             EEEEEEEcCCCEEEEEEEECCCcceEE
Confidence            456777774  8899999999999876


No 48 
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]}
Probab=42.87  E-value=11  Score=30.03  Aligned_cols=29  Identities=24%  Similarity=0.229  Sum_probs=22.9

Q ss_pred             eEEEEEEEC--CEEEEEEEcCCCCccccCHH
Q 045527          137 TLKLASEIN--NKKVVVLTDSGASHNFISNE  165 (258)
Q Consensus       137 ~i~i~~~I~--g~~v~aLIDSGAt~sfIs~~  165 (258)
                      ...+.+.|+  .+.+.++|||||+..+|...
T Consensus        16 ~Y~~~i~iGtP~Q~~~v~vDTGS~~~Wv~~~   46 (325)
T d2apra_          16 EYYGQVTIGTPGKKFNLDFDTGSSDLWIAST   46 (325)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCCEEEBT
T ss_pred             EEEEEEEEeCCCEEEEEEEECCCCcEEEeCC
Confidence            356677886  48899999999999988543


No 49 
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]}
Probab=42.25  E-value=11  Score=30.16  Aligned_cols=25  Identities=24%  Similarity=0.457  Sum_probs=20.4

Q ss_pred             EEEEEEEC--CEEEEEEEcCCCCcccc
Q 045527          138 LKLASEIN--NKKVVVLTDSGASHNFI  162 (258)
Q Consensus       138 i~i~~~I~--g~~v~aLIDSGAt~sfI  162 (258)
                      ..+.+.|+  .+++.+++||||+..+|
T Consensus        14 Y~~~i~iGtP~Q~~~~i~DTGS~~~Wv   40 (342)
T d1eaga_          14 YAADITVGSNNQKLNVIVDTGSSDLWV   40 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCEEE
T ss_pred             EEEEEEECCCCeEEEEEEECCCcceEE
Confidence            45677777  58999999999998876


No 50 
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]}
Probab=42.11  E-value=11  Score=30.31  Aligned_cols=26  Identities=19%  Similarity=0.448  Sum_probs=21.3

Q ss_pred             eEEEEEEEC--CEEEEEEEcCCCCcccc
Q 045527          137 TLKLASEIN--NKKVVVLTDSGASHNFI  162 (258)
Q Consensus       137 ~i~i~~~I~--g~~v~aLIDSGAt~sfI  162 (258)
                      -..+.+.|+  .+.+.++|||||+..+|
T Consensus        15 ~Y~~~i~iGtP~Q~~~~ivDTGSs~~wv   42 (357)
T d1mppa_          15 EYAIPVSIGTPGQDFYLLFDTGSSDTWV   42 (357)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCCEE
T ss_pred             EEEEEEEEcCCCeEEEEEEeCCCcceEE
Confidence            456677776  68999999999998876


No 51 
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]}
Probab=42.02  E-value=11  Score=29.76  Aligned_cols=26  Identities=15%  Similarity=0.305  Sum_probs=21.1

Q ss_pred             EEEEEEEC--CEEEEEEEcCCCCccccC
Q 045527          138 LKLASEIN--NKKVVVLTDSGASHNFIS  163 (258)
Q Consensus       138 i~i~~~I~--g~~v~aLIDSGAt~sfIs  163 (258)
                      ..+.+.|+  .+++.++|||||+..+|-
T Consensus        15 Y~~~i~iGtP~q~~~~~iDTGSs~~Wv~   42 (329)
T d1dpja_          15 YYTDITLGTPPQNFKVILDTGSSNLWVP   42 (329)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred             EEEEEEEeCCCeEEEEEEECCcccEEEE
Confidence            55677776  489999999999988774


No 52 
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]}
Probab=41.71  E-value=12  Score=29.39  Aligned_cols=27  Identities=19%  Similarity=0.226  Sum_probs=21.6

Q ss_pred             eEEEEEEEC--CEEEEEEEcCCCCccccC
Q 045527          137 TLKLASEIN--NKKVVVLTDSGASHNFIS  163 (258)
Q Consensus       137 ~i~i~~~I~--g~~v~aLIDSGAt~sfIs  163 (258)
                      ...+.+.|+  .+++.+++||||+..++.
T Consensus        15 ~Y~~~i~vGtP~q~~~~~~DTGSs~~Wv~   43 (323)
T d3cmsa_          15 QYFGKIYLGTPPQEFTVLFDTGSSDFWVP   43 (323)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred             EEEEEEEECCCCEEEEEEEECCCCceEEe
Confidence            355677886  589999999999988774


No 53 
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.14  E-value=3.3  Score=26.32  Aligned_cols=18  Identities=22%  Similarity=0.868  Sum_probs=14.5

Q ss_pred             CCcceecCCCc---cCccccC
Q 045527           64 CGLCYKCDEKF---SPGHRCR   81 (258)
Q Consensus        64 ~~lCf~Cg~~g---h~~~~Cp   81 (258)
                      .-.||.|+++|   |....|.
T Consensus        44 ~~fC~~C~~~w~~~H~~~tC~   64 (73)
T d2ct7a1          44 QTFCVRCKRQWEEQHRGRSCE   64 (73)
T ss_dssp             CEECSSSCSBCCTTTTTSCHH
T ss_pred             CeECcccCcchhcCCCCCCHH
Confidence            34599999999   8877775


No 54 
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.95  E-value=12  Score=29.72  Aligned_cols=26  Identities=19%  Similarity=0.266  Sum_probs=21.7

Q ss_pred             eEEEEEEECC--EEEEEEEcCCCCcccc
Q 045527          137 TLKLASEINN--KKVVVLTDSGASHNFI  162 (258)
Q Consensus       137 ~i~i~~~I~g--~~v~aLIDSGAt~sfI  162 (258)
                      ...+.+.|+.  +.+.++|||||+..+|
T Consensus        16 ~Y~~~i~iGtP~Q~~~~~~DTGS~~~Wv   43 (337)
T d1hrna_          16 QYYGEIGIGTPPQTFKVVFDTGSSNVWV   43 (337)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCEEE
T ss_pred             EEEEEEEEeCCCEEEEEEEECCCcceEE
Confidence            4567788864  8999999999999987


No 55 
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=40.58  E-value=12  Score=30.58  Aligned_cols=29  Identities=17%  Similarity=0.241  Sum_probs=23.4

Q ss_pred             eEEEEEEEC--CEEEEEEEcCCCCccccCHH
Q 045527          137 TLKLASEIN--NKKVVVLTDSGASHNFISNE  165 (258)
Q Consensus       137 ~i~i~~~I~--g~~v~aLIDSGAt~sfIs~~  165 (258)
                      ...+.+.|+  .+.+.+++||||+..+|...
T Consensus        57 ~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~   87 (370)
T d3psga_          57 EYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV   87 (370)
T ss_dssp             CEEEEEEETTTTEEEEEEEETTCCCEEEEBT
T ss_pred             EEEEEEEEcCCCeEEEEEEeCCCCCeEEECc
Confidence            356678887  58999999999999988543


No 56 
>g1b5f.1 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin {Cynara cardunculus [TaxId: 4265]}
Probab=40.04  E-value=13  Score=29.22  Aligned_cols=27  Identities=22%  Similarity=0.266  Sum_probs=21.5

Q ss_pred             CeEEEEEEEC--CEEEEEEEcCCCCcccc
Q 045527          136 KTLKLASEIN--NKKVVVLTDSGASHNFI  162 (258)
Q Consensus       136 ~~i~i~~~I~--g~~v~aLIDSGAt~sfI  162 (258)
                      ....+.+.|+  .+++.++|||||+...|
T Consensus        13 ~~Y~~~i~IGtP~Q~~~l~~DTGS~~~Wv   41 (326)
T g1b5f.1          13 TSYFGEIGIGTPPQKFTVIFDTGSSVLWV   41 (326)
T ss_dssp             TEEEEEEEETTTTEEEEEEEETTCCCEEE
T ss_pred             CEEEEEEEECCCCeEEEEEEECCCcceEE
Confidence            3456778886  48999999999998865


No 57 
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]}
Probab=39.17  E-value=13  Score=29.21  Aligned_cols=28  Identities=21%  Similarity=0.278  Sum_probs=21.9

Q ss_pred             eEEEEEEEC--CEEEEEEEcCCCCccccCH
Q 045527          137 TLKLASEIN--NKKVVVLTDSGASHNFISN  164 (258)
Q Consensus       137 ~i~i~~~I~--g~~v~aLIDSGAt~sfIs~  164 (258)
                      ...+.+.|+  .+++.+++||||+..+|-.
T Consensus        13 ~Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~~   42 (324)
T d1am5a_          13 EYYGVISIGTPPESFKVIFDTGSSNLWVSS   42 (324)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCEEECB
T ss_pred             EEEEEEEEcCCCeEEEEEEECCCcceEEec
Confidence            455667774  4899999999999888853


No 58 
>g1htr.1 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens), progastricsin (pepsinogen C) [TaxId: 9606]}
Probab=37.03  E-value=15  Score=29.88  Aligned_cols=27  Identities=22%  Similarity=0.335  Sum_probs=22.1

Q ss_pred             eEEEEEEECC--EEEEEEEcCCCCccccC
Q 045527          137 TLKLASEINN--KKVVVLTDSGASHNFIS  163 (258)
Q Consensus       137 ~i~i~~~I~g--~~v~aLIDSGAt~sfIs  163 (258)
                      ...+.+.|+.  +++.+++||||+..+|.
T Consensus        56 ~Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~   84 (372)
T g1htr.1          56 AYFGEISIGTPPQNFLVLFDTGSSNLWVP   84 (372)
T ss_dssp             CEEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred             eEEEEEEEcCCCeEEEEEEeCCCCceeec
Confidence            4566778874  89999999999998874


No 59 
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.34  E-value=14  Score=30.17  Aligned_cols=27  Identities=15%  Similarity=0.313  Sum_probs=21.7

Q ss_pred             eEEEEEEECC--EEEEEEEcCCCCccccC
Q 045527          137 TLKLASEINN--KKVVVLTDSGASHNFIS  163 (258)
Q Consensus       137 ~i~i~~~I~g--~~v~aLIDSGAt~sfIs  163 (258)
                      -..+.+.|+.  +++.++|||||+..+|.
T Consensus        15 ~Y~~~i~IGtP~Q~~~li~DTGSs~lWv~   43 (387)
T d2qp8a1          15 GYYVEMTVGSPPQTLNILVDTGSSNFAVG   43 (387)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred             EEEEEEEECCCCEEEEEEEECCccceEEc
Confidence            3566777864  89999999999988774


No 60 
>d1v86a_ d.15.1.1 (A:) hypothetical D7wsu128e protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.23  E-value=36  Score=22.08  Aligned_cols=44  Identities=14%  Similarity=0.086  Sum_probs=38.3

Q ss_pred             CCCeEEEEEEECCEEEEEEEcCCCCccccCHHHHHHcCCCcccC
Q 045527          134 SPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNT  177 (258)
Q Consensus       134 ~~~~i~i~~~I~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~  177 (258)
                      ....|.+.+..+++...+-||.-+++.-+-..+....++|....
T Consensus        14 ~~~~i~v~V~~~~k~~~i~v~~~~TV~~LK~~I~~~tgvp~~~q   57 (95)
T d1v86a_          14 GKELVDLKIIWNKTKHDVKVPLDSTGSELKQKIHSITGLPPAMQ   57 (95)
T ss_dssp             CCCCEEEEEEETTEEEEEEECTTSBHHHHHHHHHHHHCSCSTTC
T ss_pred             CccEEEEEEEECCEEEEEEECCCCcHHHHHHHHHHHhCCChhHE
Confidence            34578888899999999999999999999999999999986543


No 61 
>d1yqba1 d.15.1.1 (A:15-98) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.92  E-value=30  Score=21.84  Aligned_cols=43  Identities=14%  Similarity=0.142  Sum_probs=36.3

Q ss_pred             CCCeEEEEEEECCEEEEEEEcCCCCccccCHHHHHHcCCCccc
Q 045527          134 SPKTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITN  176 (258)
Q Consensus       134 ~~~~i~i~~~I~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~  176 (258)
                      ++.+|.|.++..+....+-||..+++--+-..++.+.+++...
T Consensus         4 ~~~~i~I~Vkt~~~~~~~~V~~~~tV~~lK~~i~~~~gi~~~~   46 (84)
T d1yqba1           4 SPHLIKVTVKTPKDKEDFSVTDTCTIQQLKEEISQRFKAHPDQ   46 (84)
T ss_dssp             CTTEEEEEEECSSCEEEEEEETTCBHHHHHHHHHHHHTCCGGG
T ss_pred             CCCEEEEEEEcCCCcEEEEECCCCcHHHHHHHHHHHHCcCchh
Confidence            4678888888888778888999999999999999999997643


No 62 
>d2j0151 g.41.8.5 (5:2-60) Ribosomal protein L32p {Thermus thermophilus [TaxId: 274]}
Probab=27.86  E-value=22  Score=21.42  Aligned_cols=34  Identities=18%  Similarity=0.324  Sum_probs=24.2

Q ss_pred             CcccCCHHHHhhccc--------CCcceecCCCccCccccCC
Q 045527           49 GFRKLTEAELQSNQE--------CGLCYKCDEKFSPGHRCRK   82 (258)
Q Consensus        49 ~~~rlt~~e~~~rR~--------~~lCf~Cg~~gh~~~~Cp~   82 (258)
                      |.++.|......||.        -..|-+||+.--+-+.||+
T Consensus         6 PKrk~Sksr~~~RRsh~~l~~p~l~~C~~CG~~~~pHrvC~~   47 (59)
T d2j0151           6 PKKKTSKARRDARRSHHALTPPTLVPCPECKAMKPPHTVCPE   47 (59)
T ss_dssp             CSSCCCHHHHHHHHGGGCCCCCCCBCCSSSSSCBCTTCBCTT
T ss_pred             CCCcccchhchhhhccccccCCceeECCCCCCcccceeECCC
Confidence            346667777666653        3559999998777778885


No 63 
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]}
Probab=27.85  E-value=9.4  Score=31.03  Aligned_cols=27  Identities=15%  Similarity=0.423  Sum_probs=21.3

Q ss_pred             EEEEEEEC--CEEEEEEEcCCCCccccCH
Q 045527          138 LKLASEIN--NKKVVVLTDSGASHNFISN  164 (258)
Q Consensus       138 i~i~~~I~--g~~v~aLIDSGAt~sfIs~  164 (258)
                      ....+.|+  .+++.+++||||+..+|..
T Consensus        62 Y~~~I~iGtP~Q~~~v~~DTGSs~lWv~~   90 (373)
T d1miqa_          62 FYGEGEVGDNHQKFMLIFDTGSANLWVPS   90 (373)
T ss_dssp             EECCCEETTTTEECCEEEETTCCCEEEEB
T ss_pred             EEEEEEECCCCEEEEEEEECCchheEEEC
Confidence            34466776  5889999999999999853


No 64 
>d1rqga3 g.41.1.1 (A:139-173) Methionyl-tRNA synthetase (MetRS), Zn-domain {Pyrococcus abyssi [TaxId: 29292]}
Probab=25.16  E-value=15  Score=19.86  Aligned_cols=19  Identities=26%  Similarity=0.651  Sum_probs=16.5

Q ss_pred             CCcceecCCCccCccccCC
Q 045527           64 CGLCYKCDEKFSPGHRCRK   82 (258)
Q Consensus        64 ~~lCf~Cg~~gh~~~~Cp~   82 (258)
                      +|.|-+|+-..-++.+|-+
T Consensus         2 ~G~CP~C~~~~a~GDqCe~   20 (35)
T d1rqga3           2 IGTCPYCGAEDQKGDQCEV   20 (35)
T ss_dssp             CSBCSSSCCSCCCTTTCSS
T ss_pred             eEECCCCCCCcccCcchhh
Confidence            4789999998899999974


No 65 
>d1v5ta_ d.15.1.1 (A:) 8430435i17rik protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.64  E-value=24  Score=22.60  Aligned_cols=43  Identities=5%  Similarity=-0.049  Sum_probs=35.5

Q ss_pred             CCCeEEEEEEECCEEEEEE-EcCCCCccccCHHHHHHcCCCccc
Q 045527          134 SPKTLKLASEINNKKVVVL-TDSGASHNFISNEVVLVLKLPITN  176 (258)
Q Consensus       134 ~~~~i~i~~~I~g~~v~aL-IDSGAt~sfIs~~~a~~l~l~~~~  176 (258)
                      ....|.|.++.++....++ |+.-.++.-+-..+..+.++|...
T Consensus         4 ~s~~~~i~Vk~~~~~~~i~~v~~~~tV~~LK~~i~~~t~vp~~~   47 (90)
T d1v5ta_           4 GSSGLPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPER   47 (90)
T ss_dssp             CCCSCCEEEEETTEEEEECSCCSSSBHHHHHHHHHHHTCCCTTT
T ss_pred             CCCcEEEEEEECCeEEEEEEeCCCCcHHHHHHHHHHHHcCCHHH
Confidence            4456778888999999886 898888888999999999997544


No 66 
>d1t3qa2 d.15.4.2 (A:7-87) Quinoline 2-oxidoreductase small subunit QorS, N-domain {Pseudomonas putida [TaxId: 303]}
Probab=22.77  E-value=53  Score=20.82  Aligned_cols=59  Identities=15%  Similarity=0.342  Sum_probs=34.1

Q ss_pred             CeEEEEEEECCEEEEEEEcCCCCccccCHHHHHHcCCCcccCCCceEeecccccccccceEeeeeEeeeceeEE
Q 045527          136 KTLKLASEINNKKVVVLTDSGASHNFISNEVVLVLKLPITNTEPYGVILRTGSATKAQGICRGVGLILQGVEIV  209 (258)
Q Consensus       136 ~~i~i~~~I~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~~~~~~V~~a~G~~~~~~~~~~~v~i~i~g~~~~  209 (258)
                      +.|.+.+.|||+++.+-+|.+-+.   ..-+=+++++.-       ++.+.+.     |.|-.+.+.++|....
T Consensus         2 ~~~~i~~~vNG~~~~~~~~~~~~L---l~~LR~~l~ltg-------~K~gC~~-----G~CGACtVlvdG~~v~   60 (81)
T d1t3qa2           2 QLMRISATINGKPRVFYVEPRMHL---ADALREVVGLTG-------TKIGCEQ-----GVCGSCTILIDGAPMR   60 (81)
T ss_dssp             CCEEEEEEETTEEEEEEECTTSBH---HHHHHHTTCCTT-------SCCSCSS-----SSSCTTEEEETTEEEE
T ss_pred             CeEEEEEEECCEEEEEecCCCCCH---HHHHhhhhCCcc-------cccCCCC-----cccCeeEEEECCCEEe
Confidence            468899999999999877765443   222223455532       1222221     3444556777776543


No 67 
>d1wh3a_ d.15.1.1 (A:) 2'-5'-oligoadenylate synthetase-like protein, OASL {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.07  E-value=83  Score=19.60  Aligned_cols=43  Identities=5%  Similarity=-0.011  Sum_probs=33.9

Q ss_pred             CCCeEEEEEEE-CCEEEEEEEcCCCCccccCHHHHHHcCCCccc
Q 045527          134 SPKTLKLASEI-NNKKVVVLTDSGASHNFISNEVVLVLKLPITN  176 (258)
Q Consensus       134 ~~~~i~i~~~I-~g~~v~aLIDSGAt~sfIs~~~a~~l~l~~~~  176 (258)
                      ....|.|.++. +|+.+.+-|+.-.++.=+-..++.+.+++...
T Consensus         4 ~s~~mqI~Vk~~~g~~~~l~v~~~~tV~~lK~~I~~~~gip~~~   47 (87)
T d1wh3a_           4 GSSGIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQ   47 (87)
T ss_dssp             CSSSEEEEEEETTTEEEEEEECSSSBHHHHHHHHHHHTCCCTTT
T ss_pred             CCCcEEEEEECCCCCEEEEEECCcCcHHHHHHHHHHHHCcChHH
Confidence            34556666665 67888888999989999999999999997543


No 68 
>d1vq0a2 g.81.1.1 (A:231-287) HSP33, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.57  E-value=8.4  Score=23.13  Aligned_cols=28  Identities=18%  Similarity=0.378  Sum_probs=20.0

Q ss_pred             cccCCHHHHhhccc----CCcceecCCCccCc
Q 045527           50 FRKLTEAELQSNQE----CGLCYKCDEKFSPG   77 (258)
Q Consensus        50 ~~rlt~~e~~~rR~----~~lCf~Cg~~gh~~   77 (258)
                      ...|+.+|++....    ...|-+||.+|++.
T Consensus        12 L~~l~~~el~~m~~eg~iev~C~FC~~~Y~f~   43 (57)
T d1vq0a2          12 LLVLDKKELEDMRKEGKGEVVCKWCNTRYVFS   43 (57)
T ss_dssp             HHTSCHHHHHHHHHHTCEEEECTTTCCEEEEC
T ss_pred             HHhCCHHHHHHHHHcCCeEEEeECCCCEEEEC
Confidence            35677888766554    34599999998874


Done!