Query 045528
Match_columns 195
No_of_seqs 147 out of 201
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 04:40:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045528.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045528hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yqq_A Zinc finger HIT domain- 99.3 7.3E-13 2.5E-17 91.8 3.2 40 152-192 9-48 (56)
2 1x4s_A Protein FON, zinc finge 99.2 1.8E-12 6.3E-17 90.7 2.3 44 148-194 5-53 (59)
3 2yqp_A Probable ATP-dependent 96.4 0.0019 6.5E-08 45.0 2.8 32 155-186 19-50 (60)
4 2odd_A Protein CBFA2T1; MYND z 96.1 0.0027 9.2E-08 43.3 2.4 33 155-187 17-50 (64)
5 2dj8_A Protein CBFA2T1; zinc f 95.7 0.0077 2.6E-07 40.7 3.1 33 155-187 15-48 (60)
6 2jw6_A Deformed epidermal auto 95.6 0.0057 1.9E-07 39.8 2.3 32 156-187 10-42 (52)
7 2od1_A Protein CBFA2T1; zinc f 95.6 0.0053 1.8E-07 41.6 2.1 32 156-187 14-46 (60)
8 2d8q_A BLU protein, zinc finge 95.3 0.0099 3.4E-07 41.7 2.7 33 155-187 15-48 (70)
9 1vd4_A Transcription initiatio 90.4 0.11 3.6E-06 33.7 1.6 34 156-189 15-62 (62)
10 3qww_A SET and MYND domain-con 89.1 0.16 5.4E-06 45.8 2.2 32 155-186 49-83 (433)
11 4rxn_A Rubredoxin; electron tr 87.9 0.22 7.5E-06 33.7 1.7 10 166-175 36-45 (54)
12 3qwp_A SET and MYND domain-con 87.7 0.22 7.7E-06 44.5 2.2 30 156-185 48-80 (429)
13 6rxn_A Rubredoxin; electron tr 87.2 0.22 7.5E-06 32.7 1.4 21 155-175 4-39 (46)
14 3n71_A Histone lysine methyltr 85.8 0.31 1.1E-05 44.6 2.1 31 155-185 49-82 (490)
15 3j20_Y 30S ribosomal protein S 84.9 0.42 1.4E-05 31.6 1.8 35 140-176 6-47 (50)
16 1wg2_A Zinc finger (AN1-like) 83.5 0.57 1.9E-05 32.9 2.1 31 148-179 8-41 (64)
17 1wfp_A Zinc finger (AN1-like) 82.6 0.78 2.7E-05 33.0 2.6 28 152-180 22-52 (74)
18 1lv3_A Hypothetical protein YA 79.1 0.71 2.4E-05 32.7 1.3 30 155-184 9-38 (68)
19 2k4x_A 30S ribosomal protein S 78.1 0.95 3.3E-05 30.4 1.7 23 154-176 17-46 (55)
20 1e8j_A Rubredoxin; iron-sulfur 78.1 0.98 3.3E-05 30.1 1.7 8 156-163 4-11 (52)
21 1wfh_A Zinc finger (AN1-like) 77.1 1.8 6.2E-05 30.3 2.9 24 156-180 16-42 (64)
22 3a43_A HYPD, hydrogenase nicke 76.9 0.74 2.5E-05 35.9 1.0 12 153-164 68-79 (139)
23 3pwf_A Rubrerythrin; non heme 76.1 0.97 3.3E-05 36.3 1.5 22 154-175 137-162 (170)
24 1x4w_A Hypothetical protein FL 73.6 2.1 7.1E-05 30.2 2.5 24 156-180 16-45 (67)
25 1wff_A Riken cDNA 2810002D23 p 72.8 2.3 8E-05 31.2 2.7 24 156-180 26-53 (85)
26 1yk4_A Rubredoxin, RD; electro 72.5 1.5 5.2E-05 29.1 1.5 9 167-175 36-44 (52)
27 2kn9_A Rubredoxin; metalloprot 72.1 1.1 3.6E-05 32.7 0.7 11 153-163 25-35 (81)
28 2v3b_B Rubredoxin 2, rubredoxi 72.0 1.5 5E-05 29.5 1.4 9 167-175 37-45 (55)
29 1h7b_A Anaerobic ribonucleotid 71.1 0.93 3.2E-05 43.3 0.3 28 141-175 533-567 (605)
30 1twf_L ABC10-alpha, DNA-direct 70.9 1.7 5.7E-05 30.7 1.5 25 152-176 25-55 (70)
31 1dx8_A Rubredoxin; electron tr 70.8 1.6 5.4E-05 30.7 1.4 9 155-163 7-15 (70)
32 2l8e_A Polyhomeotic-like prote 70.5 2 6.8E-05 28.4 1.7 30 157-186 20-49 (49)
33 1znf_A 31ST zinc finger from X 69.9 2.4 8.3E-05 21.4 1.7 21 167-187 2-22 (27)
34 2lv2_A Insulinoma-associated p 69.8 2.7 9.4E-05 29.5 2.5 36 152-187 25-77 (85)
35 1rik_A E6APC1 peptide; E6-bind 69.2 2.1 7.3E-05 21.9 1.4 22 166-187 2-23 (29)
36 2vrw_B P95VAV, VAV1, proto-onc 69.1 3 0.0001 36.3 3.1 33 153-186 355-393 (406)
37 1weo_A Cellulose synthase, cat 69.1 1.8 6.1E-05 32.4 1.4 12 165-176 57-68 (93)
38 1yuz_A Nigerythrin; rubrythrin 67.9 1.9 6.7E-05 35.3 1.6 21 155-175 171-195 (202)
39 2m0f_A Zinc finger and BTB dom 66.8 2.7 9.4E-05 21.3 1.5 22 166-187 2-23 (29)
40 2aus_D NOP10, ribosome biogene 66.8 1.8 6.1E-05 29.9 0.9 24 155-178 5-29 (60)
41 1faq_A RAF-1; transferase, ser 66.5 3.8 0.00013 25.9 2.5 22 154-175 13-36 (52)
42 2yuu_A NPKC-delta, protein kin 66.1 4.1 0.00014 28.6 2.8 29 154-183 27-61 (83)
43 1lko_A Rubrerythrin all-iron(I 65.5 1.8 6.3E-05 35.0 0.9 21 155-175 155-180 (191)
44 2m0e_A Zinc finger and BTB dom 64.8 2.9 9.9E-05 21.1 1.4 21 166-186 2-22 (29)
45 2d8v_A Zinc finger FYVE domain 64.8 3.8 0.00013 29.0 2.3 30 156-185 9-39 (67)
46 2kvf_A Zinc finger and BTB dom 64.8 3.1 0.00011 21.2 1.5 22 166-187 3-24 (28)
47 2apo_B Ribosome biogenesis pro 64.3 2.7 9.1E-05 29.0 1.4 24 155-178 6-30 (60)
48 2gqj_A Zinc finger protein KIA 64.2 3.1 0.00011 28.7 1.8 32 156-187 25-75 (98)
49 2e72_A POGO transposable eleme 63.7 2.6 8.8E-05 28.2 1.2 30 165-194 11-40 (49)
50 1ptq_A Protein kinase C delta 63.0 4.5 0.00015 25.3 2.3 22 154-175 10-37 (50)
51 2kdx_A HYPA, hydrogenase/ureas 62.5 2.9 0.0001 31.2 1.5 23 153-175 71-99 (119)
52 2kvh_A Zinc finger and BTB dom 62.0 3.7 0.00013 20.9 1.5 21 166-186 3-23 (27)
53 1s24_A Rubredoxin 2; electron 61.2 2.1 7.3E-05 31.5 0.5 11 153-163 33-43 (87)
54 3j21_g 50S ribosomal protein L 60.9 3.1 0.0001 27.8 1.2 21 155-175 14-37 (51)
55 2kvg_A Zinc finger and BTB dom 60.7 3.1 0.00011 21.4 1.0 22 166-187 3-24 (27)
56 1x5w_A Zinc finger protein 64, 60.6 8.3 0.00029 24.3 3.3 34 154-187 8-58 (70)
57 2m0d_A Zinc finger and BTB dom 59.6 3.8 0.00013 20.8 1.2 22 166-187 3-24 (30)
58 2db6_A SH3 and cysteine rich d 59.1 6.3 0.00022 27.1 2.7 36 154-190 27-68 (74)
59 4b6d_A RAC GTPase-activating p 58.7 5.1 0.00017 27.1 2.0 22 154-175 18-44 (61)
60 4gne_A Histone-lysine N-methyl 58.2 4.5 0.00015 30.4 1.9 26 154-179 57-82 (107)
61 1paa_A Yeast transcription fac 57.7 4.5 0.00015 20.8 1.3 20 166-185 2-21 (30)
62 1klr_A Zinc finger Y-chromosom 57.3 4.4 0.00015 20.5 1.2 22 166-187 2-23 (30)
63 1srk_A Zinc finger protein ZFP 57.0 5.1 0.00017 21.6 1.6 22 166-187 7-28 (35)
64 2lce_A B-cell lymphoma 6 prote 56.7 9.8 0.00034 24.3 3.2 34 154-187 16-66 (74)
65 2eli_A Protein kinase C alpha 56.6 6.6 0.00022 27.8 2.4 22 154-175 27-54 (85)
66 2jun_A Midline-1; B-BOX, TRIM, 56.5 4.6 0.00016 28.5 1.6 31 156-187 4-39 (101)
67 2cot_A Zinc finger protein 435 55.8 8.5 0.00029 24.8 2.8 35 154-188 17-68 (77)
68 3uej_A NPKC-delta, protein kin 55.7 6.8 0.00023 26.1 2.3 22 154-175 19-46 (65)
69 1p7a_A BF3, BKLF, kruppel-like 55.7 5.3 0.00018 21.8 1.5 23 165-187 10-32 (37)
70 2lcq_A Putative toxin VAPC6; P 55.5 3.8 0.00013 31.8 1.1 21 155-175 132-157 (165)
71 1y8f_A UNC-13 homolog A, MUNC1 55.1 7.5 0.00026 26.0 2.4 29 154-183 23-57 (66)
72 2enz_A NPKC-theta, protein kin 54.9 7.3 0.00025 26.0 2.3 27 154-181 22-54 (65)
73 2row_A RHO-associated protein 54.7 6.8 0.00023 28.3 2.3 30 153-183 33-70 (84)
74 2ct7_A Ring finger protein 31; 53.6 4.2 0.00014 28.7 1.0 38 154-191 24-71 (86)
75 2els_A Zinc finger protein 406 53.6 5.9 0.0002 21.5 1.4 22 166-187 9-30 (36)
76 3ky9_A Proto-oncogene VAV; cal 52.8 9.1 0.00031 35.3 3.4 36 153-191 527-568 (587)
77 2elx_A Zinc finger protein 406 52.5 6.5 0.00022 20.9 1.5 22 166-187 7-28 (35)
78 1l1o_C Replication protein A 7 52.3 10 0.00034 30.3 3.1 55 118-175 6-71 (181)
79 2elm_A Zinc finger protein 406 52.2 6 0.0002 22.0 1.3 21 165-185 8-28 (37)
80 2lvu_A Zinc finger and BTB dom 57.1 3.1 0.0001 21.0 0.0 20 167-186 3-22 (26)
81 1vk6_A NADH pyrophosphatase; 1 51.7 5 0.00017 34.0 1.3 21 156-176 108-135 (269)
82 1ard_A Yeast transcription fac 51.4 6.8 0.00023 19.7 1.4 22 166-187 2-23 (29)
83 2lvr_A Zinc finger and BTB dom 56.7 3.2 0.00011 21.3 0.0 22 166-187 3-24 (30)
84 1rim_A E6APC2 peptide; E6-bind 50.9 6.5 0.00022 21.4 1.3 22 166-187 2-23 (33)
85 1pft_A TFIIB, PFTFIIBN; N-term 50.6 7.4 0.00025 24.7 1.7 21 156-176 6-34 (50)
86 3h0g_L DNA-directed RNA polyme 50.6 8.3 0.00028 26.7 2.0 24 153-176 19-48 (63)
87 2elt_A Zinc finger protein 406 49.9 7.4 0.00025 21.0 1.5 22 166-187 9-30 (36)
88 2hf1_A Tetraacyldisaccharide-1 49.2 5.8 0.0002 27.6 1.1 20 157-176 10-36 (68)
89 2dmi_A Teashirt homolog 3; zin 49.1 9.3 0.00032 26.3 2.2 22 166-187 80-101 (115)
90 2elv_A Zinc finger protein 406 48.9 8 0.00027 21.0 1.5 23 166-188 9-31 (36)
91 2jr6_A UPF0434 protein NMA0874 48.9 5.9 0.0002 27.6 1.1 21 156-176 9-36 (68)
92 2lk0_A RNA-binding protein 5; 48.5 8.2 0.00028 22.9 1.6 19 157-175 7-28 (32)
93 2elr_A Zinc finger protein 406 48.3 7.9 0.00027 20.8 1.4 22 166-187 9-30 (36)
94 2dmd_A Zinc finger protein 64, 48.2 15 0.00052 24.2 3.1 19 167-185 37-55 (96)
95 2kfq_A FP1; protein, de novo p 47.9 4.4 0.00015 21.9 0.3 22 166-187 2-23 (32)
96 2wbt_A B-129; zinc finger; 2.7 47.6 11 0.00036 26.7 2.3 32 156-187 75-121 (129)
97 3izc_m 60S ribosomal protein R 47.5 7 0.00024 29.1 1.4 23 155-177 36-65 (92)
98 2ffw_A Midline-1; B-BOX, ring 47.0 12 0.00042 25.9 2.5 34 155-189 30-68 (78)
99 4a17_Y RPL37A, 60S ribosomal p 46.8 5.9 0.0002 30.1 0.9 23 155-177 36-65 (103)
100 2pk7_A Uncharacterized protein 46.7 7 0.00024 27.3 1.2 20 157-176 10-36 (69)
101 2ytb_A Zinc finger protein 32; 46.5 9.8 0.00033 21.3 1.7 24 165-188 10-33 (42)
102 1wfl_A Zinc finger protein 216 46.5 14 0.00047 26.5 2.8 24 156-180 26-52 (74)
103 2w0t_A Lethal(3)malignant brai 46.4 9.9 0.00034 24.6 1.8 30 157-186 8-38 (43)
104 2lvt_A Zinc finger and BTB dom 52.1 4.2 0.00014 20.9 0.0 21 167-187 3-23 (29)
105 3dzy_D Peroxisome proliferator 46.1 2.7 9.3E-05 37.7 -1.3 20 155-174 50-75 (419)
106 2zjr_Z 50S ribosomal protein L 46.0 11 0.00037 25.7 2.0 18 156-173 31-50 (60)
107 2puy_A PHD finger protein 21A; 44.9 9.2 0.00032 25.1 1.5 27 156-183 6-33 (60)
108 2yth_A Zinc finger protein 224 44.7 11 0.00038 21.7 1.8 23 165-187 11-33 (46)
109 2elq_A Zinc finger protein 406 44.5 9.9 0.00034 20.5 1.4 22 166-187 9-30 (36)
110 2epv_A Zinc finger protein 268 44.0 11 0.00036 21.7 1.6 24 165-188 11-34 (44)
111 2ee8_A Protein ODD-skipped-rel 43.8 21 0.00072 24.0 3.3 34 154-187 16-66 (106)
112 2js4_A UPF0434 protein BB2007; 43.8 7.9 0.00027 27.1 1.1 21 156-176 9-36 (70)
113 1njq_A Superman protein; zinc- 43.7 9.3 0.00032 21.2 1.3 22 166-187 6-27 (39)
114 2elo_A Zinc finger protein 406 43.5 8 0.00027 21.0 0.9 23 165-187 8-30 (37)
115 3cxl_A N-chimerin; SH2, RHO-GA 43.4 12 0.00041 33.7 2.5 28 154-182 219-252 (463)
116 3jyw_9 60S ribosomal protein L 42.7 12 0.00041 26.6 1.9 23 155-177 26-55 (72)
117 2el5_A Zinc finger protein 268 42.5 12 0.00039 21.0 1.6 23 165-187 9-31 (42)
118 2emb_A Zinc finger protein 473 42.4 12 0.00042 21.2 1.7 24 165-188 11-34 (44)
119 3qt1_I DNA-directed RNA polyme 42.4 9.5 0.00032 29.6 1.5 22 154-175 23-55 (133)
120 3v2d_5 50S ribosomal protein L 42.0 12 0.00041 25.5 1.8 18 156-173 31-50 (60)
121 2fiy_A Protein FDHE homolog; F 41.7 8.4 0.00029 33.8 1.2 12 31-42 31-42 (309)
122 2ctd_A Zinc finger protein 512 41.2 14 0.00046 25.8 2.0 30 156-185 35-81 (96)
123 1dl6_A Transcription factor II 41.1 22 0.00075 23.6 3.0 22 155-176 11-40 (58)
124 2enf_A Zinc finger protein 347 41.1 12 0.0004 21.5 1.5 23 165-187 11-33 (46)
125 1wjp_A Zinc finger protein 295 41.0 9.1 0.00031 26.2 1.1 21 166-186 69-89 (107)
126 2ept_A Zinc finger protein 32; 41.0 14 0.00048 20.6 1.8 24 165-188 9-32 (41)
127 2yt9_A Zinc finger-containing 40.8 15 0.00051 24.2 2.1 22 165-186 64-85 (95)
128 1fv5_A First zinc finger of U- 40.7 8.6 0.0003 22.9 0.8 27 165-191 7-33 (36)
129 3iz5_m 60S ribosomal protein L 40.5 11 0.00038 28.0 1.5 23 155-177 36-65 (92)
130 2enn_A NPKC-theta, protein kin 40.3 16 0.00056 25.2 2.3 22 154-175 33-60 (77)
131 2elp_A Zinc finger protein 406 40.0 13 0.00043 20.2 1.4 21 166-186 9-30 (37)
132 2eos_A B-cell lymphoma 6 prote 39.8 14 0.00049 20.7 1.7 24 165-188 10-33 (42)
133 3iuf_A Zinc finger protein UBI 39.7 12 0.00043 22.2 1.4 22 166-187 7-28 (48)
134 2yts_A Zinc finger protein 484 39.5 15 0.00052 20.9 1.8 23 165-187 11-33 (46)
135 3h0g_I DNA-directed RNA polyme 39.1 13 0.00043 27.8 1.7 21 156-176 5-36 (113)
136 2i5o_A DNA polymerase ETA; zin 39.0 11 0.00036 23.7 1.0 13 165-177 8-20 (39)
137 2eon_A ZFP-95, zinc finger pro 38.9 14 0.00049 21.3 1.6 23 165-187 11-33 (46)
138 2ysm_A Myeloid/lymphoid or mix 38.8 12 0.00041 27.2 1.5 22 155-176 7-32 (111)
139 2ep1_A Zinc finger protein 484 38.7 13 0.00044 21.3 1.3 23 165-187 11-33 (46)
140 2zet_C Melanophilin; complex, 38.6 14 0.00047 29.3 1.9 30 155-185 68-103 (153)
141 2k1p_A Zinc finger RAN-binding 38.5 15 0.00053 21.8 1.7 19 157-175 8-29 (33)
142 2yte_A Zinc finger protein 473 38.4 13 0.00046 20.6 1.4 22 166-187 10-31 (42)
143 2en2_A B-cell lymphoma 6 prote 37.9 14 0.0005 20.6 1.5 23 165-187 10-32 (42)
144 3cc2_Z 50S ribosomal protein L 37.8 9.6 0.00033 29.4 0.8 23 155-177 60-89 (116)
145 2em6_A Zinc finger protein 224 37.8 14 0.00049 21.2 1.5 22 166-187 12-33 (46)
146 2enh_A Zinc finger protein 28 37.7 16 0.00053 21.0 1.6 23 165-187 11-33 (46)
147 2eoz_A Zinc finger protein 473 37.6 12 0.0004 21.6 1.0 23 165-187 11-33 (46)
148 2yu5_A Zinc finger protein 473 37.3 15 0.0005 20.9 1.4 23 165-187 11-33 (44)
149 2jny_A Uncharacterized BCR; st 37.3 12 0.00041 26.0 1.2 21 156-176 11-38 (67)
150 2en7_A Zinc finger protein 268 36.5 14 0.00047 20.8 1.2 23 165-187 11-33 (44)
151 2eoy_A Zinc finger protein 473 36.4 16 0.00053 21.0 1.5 23 165-187 11-33 (46)
152 2epc_A Zinc finger protein 32; 36.3 16 0.00055 20.3 1.5 23 165-187 10-32 (42)
153 2emi_A Zinc finger protein 484 36.3 16 0.00056 20.9 1.6 23 165-187 11-33 (46)
154 3j21_i 50S ribosomal protein L 36.1 13 0.00046 27.0 1.3 23 155-177 35-64 (83)
155 2yto_A Zinc finger protein 484 35.9 16 0.00056 20.9 1.5 23 165-187 11-33 (46)
156 2ab3_A ZNF29; zinc finger prot 35.9 14 0.00049 18.4 1.1 22 166-187 2-25 (29)
157 2emg_A Zinc finger protein 484 35.8 16 0.00053 21.0 1.4 22 166-187 12-33 (46)
158 2eq1_A Zinc finger protein 347 35.6 15 0.0005 21.1 1.3 23 165-187 11-33 (46)
159 2em9_A Zinc finger protein 224 35.6 19 0.00065 20.5 1.8 23 165-187 11-33 (46)
160 2yti_A Zinc finger protein 347 35.5 14 0.00049 21.1 1.2 23 165-187 11-33 (46)
161 2eof_A Zinc finger protein 268 35.4 16 0.00056 20.5 1.4 23 165-187 11-33 (44)
162 3c5k_A HD6, histone deacetylas 35.3 25 0.00084 26.3 2.7 25 155-179 24-49 (109)
163 2eoj_A Zinc finger protein 268 35.2 13 0.00043 21.1 0.9 22 166-187 12-33 (44)
164 2em7_A Zinc finger protein 224 34.8 20 0.00067 20.5 1.7 23 165-187 11-33 (46)
165 2en3_A ZFP-95, zinc finger pro 34.7 17 0.00059 20.7 1.5 21 166-186 12-32 (46)
166 2el4_A Zinc finger protein 268 34.4 20 0.00068 20.4 1.7 23 165-187 11-33 (46)
167 2yrj_A Zinc finger protein 473 34.4 18 0.00061 20.6 1.5 23 165-187 11-33 (46)
168 2ytf_A Zinc finger protein 268 34.4 16 0.00055 20.8 1.3 23 165-187 11-33 (46)
169 1jm7_B BARD1, BRCA1-associated 34.4 27 0.00093 25.1 2.8 23 154-176 42-65 (117)
170 2yt5_A Metal-response element- 33.9 19 0.00065 23.7 1.7 28 156-184 7-40 (66)
171 1wii_A Hypothetical UPF0222 pr 33.9 21 0.00072 25.9 2.1 26 151-176 19-57 (85)
172 3r24_B Non-structural protein 33.8 11 0.00038 30.2 0.6 15 156-170 118-132 (155)
173 2eml_A Zinc finger protein 28 33.4 19 0.00066 20.5 1.6 23 165-187 11-33 (46)
174 2eq0_A Zinc finger protein 347 33.3 18 0.00063 20.6 1.4 23 165-187 11-33 (46)
175 2eq2_A Zinc finger protein 347 33.3 19 0.00065 20.6 1.5 23 165-187 11-33 (46)
176 3uk3_C Zinc finger protein 217 33.2 18 0.0006 21.5 1.4 19 167-185 33-51 (57)
177 1yui_A GAGA-factor; complex (D 33.2 18 0.00062 21.7 1.4 23 165-187 23-45 (54)
178 2ckl_A Polycomb group ring fin 33.2 21 0.00071 25.2 2.0 28 157-185 17-46 (108)
179 2ep3_A Zinc finger protein 484 33.1 19 0.00066 20.5 1.5 23 165-187 11-33 (46)
180 2yrm_A B-cell lymphoma 6 prote 33.0 19 0.00067 20.4 1.5 22 166-187 10-31 (43)
181 1mm2_A MI2-beta; PHD, zinc fin 33.0 19 0.00066 23.8 1.7 21 156-176 10-31 (61)
182 2gmg_A Hypothetical protein PF 32.8 17 0.00057 27.6 1.4 21 157-177 69-95 (105)
183 2olm_A Nucleoporin-like protei 32.7 19 0.00066 28.1 1.8 32 155-187 25-57 (140)
184 2fyg_A Replicase polyprotein 1 32.7 14 0.0005 28.8 1.1 15 156-170 111-125 (128)
185 2el6_A Zinc finger protein 268 32.5 20 0.00068 20.5 1.5 23 165-187 11-33 (46)
186 2ytn_A Zinc finger protein 347 32.4 22 0.00074 20.3 1.7 23 165-187 11-33 (46)
187 2emj_A Zinc finger protein 28 32.4 20 0.00067 20.6 1.5 23 165-187 11-33 (46)
188 2epu_A Zinc finger protein 32; 32.4 16 0.00054 20.9 1.0 23 165-187 11-33 (45)
189 2ytp_A Zinc finger protein 484 32.4 20 0.00069 20.5 1.5 23 165-187 11-33 (46)
190 2yql_A PHD finger protein 21A; 32.3 20 0.00067 23.2 1.6 28 155-183 9-37 (56)
191 2em4_A Zinc finger protein 28 32.2 20 0.0007 20.5 1.5 23 165-187 11-33 (46)
192 1xwh_A Autoimmune regulator; P 32.2 20 0.00069 24.0 1.7 27 156-183 9-36 (66)
193 2eow_A Zinc finger protein 347 32.2 20 0.00068 20.4 1.5 23 165-187 11-33 (46)
194 3alr_A Nanos protein; zinc-fin 32.0 23 0.00077 27.0 2.0 24 155-181 63-94 (106)
195 2emf_A Zinc finger protein 484 32.0 23 0.00079 20.2 1.7 23 165-187 11-33 (46)
196 2ytg_A ZFP-95, zinc finger pro 31.9 22 0.00077 20.2 1.7 23 165-187 11-33 (46)
197 2ema_A Zinc finger protein 347 31.8 21 0.00072 20.4 1.5 23 165-187 11-33 (46)
198 2epw_A Zinc finger protein 268 31.7 21 0.00071 20.3 1.5 23 165-187 11-33 (46)
199 2eme_A Zinc finger protein 473 31.7 22 0.00074 20.2 1.6 23 165-187 11-33 (46)
200 2em2_A Zinc finger protein 28 31.5 21 0.00072 20.4 1.5 23 165-187 11-33 (46)
201 2eop_A Zinc finger protein 268 31.5 20 0.00069 20.4 1.4 23 165-187 11-33 (46)
202 2en8_A Zinc finger protein 224 31.5 21 0.00071 20.3 1.4 23 165-187 11-33 (46)
203 2eox_A Zinc finger protein 473 31.5 17 0.00057 20.6 1.0 23 165-187 11-33 (44)
204 1zfd_A SWI5; DNA binding motif 31.4 22 0.00076 18.4 1.5 23 166-188 3-27 (32)
205 2elz_A Zinc finger protein 224 31.3 24 0.00081 20.2 1.7 23 165-187 11-33 (46)
206 2en9_A Zinc finger protein 28 31.0 21 0.00071 20.5 1.4 23 165-187 11-33 (46)
207 2eq3_A Zinc finger protein 347 31.0 16 0.00055 20.8 0.9 23 165-187 11-33 (46)
208 2dkt_A Ring finger and CHY zin 31.0 15 0.00052 29.1 1.0 19 156-174 84-106 (143)
209 2eom_A ZFP-95, zinc finger pro 30.9 20 0.00069 20.6 1.3 22 166-187 12-33 (46)
210 2eor_A Zinc finger protein 224 30.6 22 0.00075 20.2 1.4 23 165-187 11-33 (46)
211 2ytj_A Zinc finger protein 484 30.5 23 0.00077 20.2 1.5 23 165-187 11-33 (46)
212 2em3_A Zinc finger protein 28 30.5 23 0.00077 20.2 1.5 23 165-187 11-33 (46)
213 1vq8_Z 50S ribosomal protein L 30.5 17 0.00057 26.2 1.0 23 155-177 27-56 (83)
214 2g45_A Ubiquitin carboxyl-term 30.4 34 0.0012 26.3 2.9 26 155-180 34-60 (129)
215 2ep2_A Zinc finger protein 484 30.3 23 0.00078 20.2 1.5 23 165-187 11-33 (46)
216 2ely_A Zinc finger protein 224 30.3 24 0.00082 20.2 1.6 22 166-187 12-33 (46)
217 4gzn_C ZFP-57, zinc finger pro 30.3 24 0.00081 22.9 1.7 22 166-187 32-53 (60)
218 2emm_A ZFP-95, zinc finger pro 29.8 24 0.00081 20.0 1.5 23 165-187 11-33 (46)
219 2em8_A Zinc finger protein 224 29.7 24 0.00081 20.2 1.5 23 165-187 11-33 (46)
220 2eoo_A ZFP-95, zinc finger pro 29.6 24 0.00082 20.2 1.5 23 165-187 11-33 (46)
221 2ytq_A Zinc finger protein 268 29.4 23 0.0008 20.2 1.4 22 166-187 12-33 (46)
222 2ene_A Zinc finger protein 347 29.4 24 0.00083 20.1 1.5 23 165-187 11-33 (46)
223 2kpi_A Uncharacterized protein 29.4 23 0.00079 23.5 1.5 21 156-176 11-38 (56)
224 2jp9_A Wilms tumor 1; DNA bind 29.4 23 0.00078 24.1 1.6 20 167-186 95-116 (119)
225 2em0_A Zinc finger protein 224 29.2 26 0.00088 20.0 1.6 23 165-187 11-33 (46)
226 2iqj_A Stromal membrane-associ 29.1 22 0.00076 27.5 1.6 33 154-187 26-59 (134)
227 1joc_A EEA1, early endosomal a 29.0 24 0.00083 26.6 1.8 24 156-179 70-98 (125)
228 2eoh_A Zinc finger protein 28 29.0 23 0.00078 20.3 1.3 22 166-187 12-33 (46)
229 2ep0_A Zinc finger protein 28 28.8 25 0.00086 20.0 1.5 23 165-187 11-33 (46)
230 1kbe_A Kinase suppressor of RA 28.7 23 0.00079 22.9 1.4 20 156-175 15-36 (49)
231 1f62_A Transcription factor WS 28.7 27 0.00091 21.9 1.7 25 157-182 2-30 (51)
232 1tfi_A Transcriptional elongat 28.6 26 0.00087 22.8 1.6 9 167-175 38-46 (50)
233 1wys_A Riken cDNA 2310008M20 p 28.6 27 0.00093 24.7 1.9 24 156-179 15-42 (75)
234 2eou_A Zinc finger protein 473 28.5 23 0.00079 20.0 1.3 22 166-187 12-33 (44)
235 1wfe_A Riken cDNA 2310008M20 p 28.4 40 0.0014 24.3 2.8 27 153-179 23-53 (86)
236 2eov_A Zinc finger protein 484 28.4 25 0.00086 19.9 1.5 22 166-187 12-33 (46)
237 2eod_A TNF receptor-associated 28.4 27 0.00093 21.7 1.7 28 166-193 36-64 (66)
238 2drp_A Protein (tramtrack DNA- 28.3 24 0.00083 21.6 1.4 22 166-187 10-31 (66)
239 2ysp_A Zinc finger protein 224 28.2 20 0.0007 20.4 1.0 23 165-187 11-33 (46)
240 1twf_I B12.6, DNA-directed RNA 28.1 23 0.0008 26.6 1.6 21 156-176 5-36 (122)
241 2han_A Protein ultraspiracle; 28.0 7.8 0.00027 28.3 -1.1 20 155-174 10-35 (93)
242 1fp0_A KAP-1 corepressor; PHD 28.0 24 0.00083 25.6 1.6 21 156-176 26-47 (88)
243 2em5_A ZFP-95, zinc finger pro 27.9 27 0.00091 19.9 1.5 23 165-187 11-33 (46)
244 3j21_V 50S ribosomal protein L 27.8 33 0.0011 23.8 2.2 41 154-194 3-53 (66)
245 2emy_A Zinc finger protein 268 27.8 27 0.00092 19.9 1.5 23 165-187 11-33 (46)
246 2emh_A Zinc finger protein 484 27.8 26 0.00089 19.9 1.4 22 165-186 11-32 (46)
247 2emp_A Zinc finger protein 347 27.7 27 0.00091 19.9 1.5 22 165-186 11-32 (46)
248 3pfq_A PKC-B, PKC-beta, protei 27.6 13 0.00044 34.8 0.0 32 151-183 44-81 (674)
249 1x3z_A Peptide: N-glycanase; h 27.6 19 0.00065 32.2 1.1 26 166-191 155-185 (335)
250 3lrq_A E3 ubiquitin-protein li 27.6 27 0.00092 24.6 1.7 10 168-177 37-46 (100)
251 2en1_A Zinc finger protein 224 27.5 25 0.00084 20.0 1.3 23 165-187 11-33 (46)
252 2uzg_A Ubiquitin carboxyl-term 27.4 27 0.00092 25.3 1.8 24 156-179 26-53 (97)
253 2epz_A Zinc finger protein 28 27.4 27 0.00091 19.9 1.4 22 166-187 12-33 (46)
254 2epx_A Zinc finger protein 28 27.4 28 0.00095 19.8 1.5 22 166-187 12-33 (47)
255 2ytk_A Zinc finger protein 347 27.4 28 0.00095 19.8 1.5 23 165-187 11-33 (46)
256 2l43_A N-teminal domain from h 27.2 29 0.00099 24.7 1.9 29 155-184 25-59 (88)
257 2emz_A ZFP-95, zinc finger pro 27.1 26 0.00088 20.0 1.3 21 166-186 12-32 (46)
258 1bbo_A Human enhancer-binding 27.1 27 0.00091 20.6 1.5 21 167-187 30-50 (57)
259 2ytr_A Zinc finger protein 347 27.0 23 0.0008 20.1 1.1 23 165-187 11-33 (46)
260 2emk_A Zinc finger protein 28 26.9 28 0.00094 19.9 1.4 22 166-187 12-33 (46)
261 2l5u_A Chromodomain-helicase-D 26.8 29 0.001 22.9 1.7 21 156-176 12-33 (61)
262 2eq4_A Zinc finger protein 224 26.8 25 0.00086 19.9 1.2 22 166-187 12-33 (46)
263 2yu8_A Zinc finger protein 347 26.7 29 0.00098 19.7 1.5 22 165-186 11-32 (46)
264 2ytd_A Zinc finger protein 473 26.6 29 0.00099 19.7 1.5 23 165-187 11-33 (46)
265 2yw8_A RUN and FYVE domain-con 26.6 31 0.0011 24.0 1.9 24 156-179 20-48 (82)
266 3irb_A Uncharacterized protein 26.6 21 0.00072 27.6 1.1 18 157-174 49-69 (145)
267 2eoq_A Zinc finger protein 224 26.5 27 0.00092 19.9 1.3 23 165-187 11-33 (46)
268 1z60_A TFIIH basal transcripti 26.5 21 0.0007 24.3 0.9 22 157-178 17-42 (59)
269 1jjd_A Metallothionein, SMTA; 26.3 18 0.00063 24.3 0.6 16 173-188 27-42 (55)
270 2epp_A POZ-, at HOOK-, and zin 26.0 25 0.00086 23.5 1.3 22 166-187 13-34 (66)
271 2jvx_A NF-kappa-B essential mo 25.8 31 0.001 20.2 1.4 23 165-187 2-24 (28)
272 2adr_A ADR1; transcription reg 25.5 29 0.001 20.8 1.4 21 166-186 30-50 (60)
273 1vfy_A Phosphatidylinositol-3- 25.5 30 0.001 23.5 1.6 24 156-179 12-40 (73)
274 1jm7_A BRCA1, breast cancer ty 25.3 33 0.0011 23.9 1.9 10 167-176 59-68 (112)
275 2i13_A AART; DNA binding, zinc 25.3 35 0.0012 25.5 2.2 22 166-187 161-182 (190)
276 2epq_A POZ-, at HOOK-, and zin 25.2 23 0.00079 20.1 0.9 22 166-187 10-31 (45)
277 2j9u_B VPS36, vacuolar protein 25.2 30 0.001 24.8 1.6 8 156-163 18-25 (76)
278 4ayb_P DNA-directed RNA polyme 25.1 21 0.00073 23.6 0.7 12 165-176 2-13 (48)
279 2ctu_A Zinc finger protein 483 25.1 8.3 0.00028 24.0 -1.3 32 156-187 19-60 (73)
280 2crr_A Stromal membrane-associ 25.1 26 0.00089 27.4 1.4 31 156-187 30-61 (141)
281 2yso_A ZFP-95, zinc finger pro 25.1 31 0.0011 19.6 1.4 23 165-187 11-33 (46)
282 2d9h_A Zinc finger protein 692 25.0 30 0.001 22.0 1.4 21 166-186 38-58 (78)
283 1sp2_A SP1F2; zinc finger, tra 24.8 33 0.0011 17.6 1.4 22 166-187 2-25 (31)
284 1f2i_G Fusion of N-terminal 17 24.7 30 0.001 21.6 1.4 22 166-187 49-70 (73)
285 2ytt_A Zinc finger protein 473 24.6 28 0.00097 19.8 1.2 22 166-187 12-33 (46)
286 2eoe_A Zinc finger protein 347 24.6 25 0.00085 19.9 0.9 23 165-187 11-33 (46)
287 2epr_A POZ-, at HOOK-, and zin 24.6 30 0.001 20.1 1.3 22 166-187 12-33 (48)
288 2eps_A POZ-, at HOOK-, and zin 24.6 32 0.0011 20.6 1.5 21 166-186 12-32 (54)
289 2fnf_X Putative RAS effector N 24.6 46 0.0016 22.8 2.4 22 154-175 34-58 (72)
290 2ct1_A Transcriptional repress 24.5 31 0.0011 22.0 1.5 22 166-187 45-66 (77)
291 2emx_A Zinc finger protein 268 24.4 33 0.0011 19.2 1.5 22 166-187 10-31 (44)
292 2crw_A ARF GAP 3, ADP-ribosyla 24.4 33 0.0011 27.2 1.8 32 155-187 29-61 (149)
293 1ffk_W Ribosomal protein L37AE 24.4 32 0.0011 24.3 1.6 22 155-176 27-55 (73)
294 2ytm_A Zinc finger protein 28 24.3 29 0.00098 19.9 1.2 22 166-187 12-33 (46)
295 1r4i_A Androgen receptor; AR, 24.3 10 0.00035 28.3 -1.1 20 155-174 7-32 (105)
296 2d9g_A YY1-associated factor 2 24.3 32 0.0011 22.6 1.5 23 155-177 11-36 (53)
297 2enc_A Zinc finger protein 224 24.1 34 0.0012 19.4 1.5 22 166-187 12-33 (46)
298 2ecv_A Tripartite motif-contai 23.9 43 0.0015 21.8 2.2 31 154-185 18-49 (85)
299 3t7l_A Zinc finger FYVE domain 23.5 37 0.0013 24.1 1.8 24 156-179 21-49 (90)
300 2han_B Ecdysone receptor; tran 23.3 13 0.00043 28.3 -0.8 19 156-174 9-33 (119)
301 1x6e_A Zinc finger protein 24; 23.1 35 0.0012 21.4 1.5 21 166-186 14-34 (72)
302 2pv0_B DNA (cytosine-5)-methyl 23.1 34 0.0012 31.1 1.9 31 155-186 93-126 (386)
303 1x4v_A Hypothetical protein LO 22.9 39 0.0013 23.1 1.8 24 156-179 13-40 (63)
304 2c2l_A CHIP, carboxy terminus 22.7 51 0.0017 26.3 2.7 33 152-185 205-238 (281)
305 3gj3_B Nuclear pore complex pr 22.7 39 0.0013 20.4 1.5 20 156-175 8-30 (33)
306 2en6_A Zinc finger protein 268 22.3 31 0.0011 19.6 1.0 23 165-187 11-33 (46)
307 2owa_A Arfgap-like finger doma 22.1 38 0.0013 26.4 1.8 32 155-187 36-68 (138)
308 2ysl_A Tripartite motif-contai 22.0 53 0.0018 21.0 2.2 34 153-187 18-52 (73)
309 3l11_A E3 ubiquitin-protein li 21.5 43 0.0015 23.7 1.9 28 157-185 17-45 (115)
310 1rfh_A RAS association (ralgds 21.5 55 0.0019 21.3 2.3 22 153-174 20-44 (59)
311 1x0t_A Ribonuclease P protein 21.4 31 0.001 26.0 1.1 10 154-163 64-73 (120)
312 3k1f_M Transcription initiatio 21.4 34 0.0012 28.5 1.4 20 155-174 21-50 (197)
313 1bhi_A CRE-BP1, ATF-2; CRE bin 21.3 43 0.0015 18.0 1.5 22 166-187 6-29 (38)
314 2ebl_A COUP transcription fact 21.3 15 0.00053 26.5 -0.6 19 156-174 8-32 (89)
315 1gh9_A 8.3 kDa protein (gene M 21.3 27 0.00094 24.4 0.7 6 168-174 23-28 (71)
316 2kr4_A Ubiquitin conjugation f 21.2 56 0.0019 22.4 2.3 33 152-185 11-44 (85)
317 3fl2_A E3 ubiquitin-protein li 21.2 46 0.0016 24.0 2.0 21 156-176 73-97 (124)
318 2yu4_A E3 SUMO-protein ligase 21.1 59 0.002 22.6 2.5 26 153-178 5-32 (94)
319 3v43_A Histone acetyltransfera 21.1 43 0.0015 24.4 1.8 28 155-183 5-42 (112)
320 1dvp_A HRS, hepatocyte growth 21.0 41 0.0014 27.2 1.8 24 156-179 162-190 (220)
321 4hn5_A Glucocorticoid receptor 21.0 12 0.00042 28.5 -1.2 19 156-174 30-54 (117)
322 2gnr_A Conserved hypothetical 21.0 34 0.0012 26.6 1.3 20 156-175 48-70 (145)
323 1vq8_U 50S ribosomal protein L 20.9 52 0.0018 22.8 2.1 40 155-194 3-52 (66)
324 2bx9_A Anti-trap, AT, tryptoph 20.8 42 0.0014 22.0 1.5 18 156-173 10-30 (53)
325 3g9m_A Glucocorticoid receptor 20.6 13 0.00043 26.8 -1.2 19 156-174 3-27 (90)
326 1u6p_A GAG polyprotein; MLV, A 20.6 55 0.0019 21.8 2.1 18 154-171 22-41 (56)
327 1mty_D Methane monooxygenase h 20.5 37 0.0013 31.8 1.7 33 153-185 399-443 (512)
328 1x6h_A Transcriptional repress 20.0 43 0.0015 21.3 1.5 22 166-187 47-68 (86)
No 1
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=7.3e-13 Score=91.77 Aligned_cols=40 Identities=23% Similarity=0.725 Sum_probs=35.9
Q ss_pred CCCcccccccCCCCceeccCCCCcccChhhhhhhcccccCc
Q 045528 152 TSRRHFCTVCGFSANYTCVKCGMRFCCIRCQNIHDDTRCLK 192 (195)
Q Consensus 152 ~P~r~fC~VCG~~~~YtC~~Cg~ryCS~~C~~~H~EtRC~K 192 (195)
.....||.|||.+++|+||+|+++|||+.|++.|+++ |..
T Consensus 9 ~~~~~~C~vC~~~~kY~CPrC~~~yCSl~C~k~Hk~~-C~~ 48 (56)
T 2yqq_A 9 KCSTVVCVICLEKPKYRCPACRVPYCSVVCFRKHKEQ-CNP 48 (56)
T ss_dssp CCCCCCCTTTCSCCSEECTTTCCEESSHHHHHHHHHH-CCC
T ss_pred CCCCCccCcCcCCCeeeCCCCCCCeeCHHHHHHHHhh-CcC
Confidence 3344699999999999999999999999999999998 964
No 2
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=99.24 E-value=1.8e-12 Score=90.67 Aligned_cols=44 Identities=30% Similarity=0.795 Sum_probs=35.7
Q ss_pred CCCCCCCcccccccC----CCCceeccCCCCcccChhhhhhhcccccC-ccc
Q 045528 148 PPSKTSRRHFCTVCG----FSANYTCVKCGMRFCCIRCQNIHDDTRCL-KFV 194 (195)
Q Consensus 148 ps~~~P~r~fC~VCG----~~~~YtC~~Cg~ryCS~~C~~~H~EtRC~-K~~ 194 (195)
++...| +.+|.||+ ++++|+||+||++|||+.|++.|++ |. .|+
T Consensus 5 ~s~m~~-~~~C~vC~~~~~~~akY~CPrC~~rYCSl~C~k~Hk~--Cse~F~ 53 (59)
T 1x4s_A 5 SSGMEP-AGPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTHGT--CAENFY 53 (59)
T ss_dssp CSSCCC-CEEECSSCTTCCEEECEECTTTCCEESSHHHHHHHCC--GGGGTS
T ss_pred CCCCCC-CCcCcCCCCCcCCCccccCcCCCCCccChHHHHHHhH--hCHHHH
Confidence 333444 57999998 6899999999999999999999984 63 443
No 3
>2yqp_A Probable ATP-dependent RNA helicase DDX59; structure genomics, ZF-HIT domain, DEAD box polypeptide 59 isoform 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.39 E-value=0.0019 Score=44.97 Aligned_cols=32 Identities=31% Similarity=0.764 Sum_probs=29.0
Q ss_pred cccccccCCCCceeccCCCCcccChhhhhhhc
Q 045528 155 RHFCTVCGFSANYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 155 r~fC~VCG~~~~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
-.+|.|||-+|.|-|-.=....||+.|-..|-
T Consensus 19 ePvCvvCGryGeYICd~Td~DVCSlECK~~~l 50 (60)
T 2yqp_A 19 EPICVVCGRYGEYICDKTDEDVCSLECKAKHL 50 (60)
T ss_dssp SCCCSSSSSCCSEECSSSCCEESSHHHHHHHH
T ss_pred CceEEEecCccceeecCCCcchhhHHHHHHHH
Confidence 34799999999999999999999999988764
No 4
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=96.11 E-value=0.0027 Score=43.28 Aligned_cols=33 Identities=33% Similarity=0.681 Sum_probs=28.5
Q ss_pred cccccccCCCCceeccCCC-CcccChhhhhhhcc
Q 045528 155 RHFCTVCGFSANYTCVKCG-MRFCCIRCQNIHDD 187 (195)
Q Consensus 155 r~fC~VCG~~~~YtC~~Cg-~ryCS~~C~~~H~E 187 (195)
...|.+||.++..+|.+|. ..|||..|...|..
T Consensus 17 ~~~C~~C~~~~~~~Cs~C~~~~YCs~~CQ~~~W~ 50 (64)
T 2odd_A 17 SESCWNCGRKASETCSGCNTARYCGSFCQHKDWE 50 (64)
T ss_dssp SSSCTTTSSCCCEEETTTSCCEESSHHHHHHHHH
T ss_pred CCcCccccCCCcccCCCCCChhhCCHHHHHHHHH
Confidence 4589999999999999995 57999999987654
No 5
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=95.65 E-value=0.0077 Score=40.68 Aligned_cols=33 Identities=33% Similarity=0.682 Sum_probs=28.6
Q ss_pred cccccccCCCCceeccCCCC-cccChhhhhhhcc
Q 045528 155 RHFCTVCGFSANYTCVKCGM-RFCCIRCQNIHDD 187 (195)
Q Consensus 155 r~fC~VCG~~~~YtC~~Cg~-ryCS~~C~~~H~E 187 (195)
...|.+||.++..+|.+|.. .|||..|...|..
T Consensus 15 ~~~C~~C~~~~~~~Cs~C~~v~YCs~~CQ~~~W~ 48 (60)
T 2dj8_A 15 SESCWNCGRKASETCSGCNTARYCGSFCQHKDWE 48 (60)
T ss_dssp SCCCSSSCSCCCEECTTTSCCEESSHHHHHHTHH
T ss_pred CcccccCCCCCcccCCCCCCEeeeCHHHHHHHHH
Confidence 35999999999999999965 8999999987654
No 6
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=95.63 E-value=0.0057 Score=39.77 Aligned_cols=32 Identities=28% Similarity=0.640 Sum_probs=28.0
Q ss_pred ccccccCCCCceeccCCCC-cccChhhhhhhcc
Q 045528 156 HFCTVCGFSANYTCVKCGM-RFCCIRCQNIHDD 187 (195)
Q Consensus 156 ~fC~VCG~~~~YtC~~Cg~-ryCS~~C~~~H~E 187 (195)
..|.+||.++...|.+|.. .|||..|...|..
T Consensus 10 ~~C~~C~~~~~~~C~~C~~~~YCs~~CQ~~~W~ 42 (52)
T 2jw6_A 10 QSCVNCGREAMSECTGCHKVNYCSTFCQRKDWK 42 (52)
T ss_dssp -CCSSSSSSCSEECTTTCSSEESSHHHHHHHTT
T ss_pred CcCCCCCCCCcCcCCCCCCEeecCHHHHHHHHH
Confidence 4899999999999999965 7999999988765
No 7
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=95.60 E-value=0.0053 Score=41.56 Aligned_cols=32 Identities=34% Similarity=0.704 Sum_probs=27.7
Q ss_pred ccccccCCCCceeccCCC-CcccChhhhhhhcc
Q 045528 156 HFCTVCGFSANYTCVKCG-MRFCCIRCQNIHDD 187 (195)
Q Consensus 156 ~fC~VCG~~~~YtC~~Cg-~ryCS~~C~~~H~E 187 (195)
.+|.+||.++..+|.+|. ..|||..|...|..
T Consensus 14 ~~C~~C~~~~~~~Cs~C~~v~YCs~~CQ~~dW~ 46 (60)
T 2od1_A 14 ESCWNCGRKASETCSGCNTARYCGSFCQHKDWE 46 (60)
T ss_dssp SCCTTTSSCCCEECTTTSCCEESSHHHHHHHHH
T ss_pred CccccCCCcccccCCCCCCeeecCHHHHHHHHH
Confidence 489999999999999996 57999999776554
No 8
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=95.30 E-value=0.0099 Score=41.75 Aligned_cols=33 Identities=33% Similarity=0.826 Sum_probs=29.0
Q ss_pred cccccccCCCCceeccCCC-CcccChhhhhhhcc
Q 045528 155 RHFCTVCGFSANYTCVKCG-MRFCCIRCQNIHDD 187 (195)
Q Consensus 155 r~fC~VCG~~~~YtC~~Cg-~ryCS~~C~~~H~E 187 (195)
..+|.+||.++...|.+|. .+|||..|+..|..
T Consensus 15 ~~~C~~C~~~~~~~Cs~Ck~v~YCs~eCQ~~~W~ 48 (70)
T 2d8q_A 15 RPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWE 48 (70)
T ss_dssp CCBCSSSCCBCCCBCTTTSCCBCSCHHHHHHTHH
T ss_pred CCcCCCCCCcccccCCCCCCEeeCCHHHhHHHHH
Confidence 4599999999999999996 57999999988865
No 9
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=90.43 E-value=0.11 Score=33.70 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=28.1
Q ss_pred ccccccCC--------------CCceeccCCCCcccChhhhhhhcccc
Q 045528 156 HFCTVCGF--------------SANYTCVKCGMRFCCIRCQNIHDDTR 189 (195)
Q Consensus 156 ~fC~VCG~--------------~~~YtC~~Cg~ryCS~~C~~~H~EtR 189 (195)
.-|.+||. ...|.|..||..|-...-...|++||
T Consensus 15 ~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~~~~~~~~~tr 62 (62)
T 1vd4_A 15 FKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPKKDAR 62 (62)
T ss_dssp EECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEECTTCSCCCCCC
T ss_pred ccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccCccccccccCC
Confidence 57999997 35799999999998888777887776
No 10
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=89.10 E-value=0.16 Score=45.83 Aligned_cols=32 Identities=25% Similarity=0.601 Sum_probs=26.4
Q ss_pred cccccccCC--CCceeccCCCC-cccChhhhhhhc
Q 045528 155 RHFCTVCGF--SANYTCVKCGM-RFCCIRCQNIHD 186 (195)
Q Consensus 155 r~fC~VCG~--~~~YtC~~Cg~-ryCS~~C~~~H~ 186 (195)
...|..|+. .+-+.|.+|+. +|||..|+..|.
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w 83 (433)
T 3qww_A 49 GHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDW 83 (433)
T ss_dssp TTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHHH
T ss_pred CCcCCcccccCCCCCCCCCCcceeecChhhhhhhh
Confidence 458999996 46789999987 999999996543
No 11
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=87.89 E-value=0.22 Score=33.70 Aligned_cols=10 Identities=30% Similarity=1.085 Sum_probs=7.9
Q ss_pred ceeccCCCCc
Q 045528 166 NYTCVKCGMR 175 (195)
Q Consensus 166 ~YtC~~Cg~r 175 (195)
.++||.||..
T Consensus 36 dw~CP~Cg~~ 45 (54)
T 4rxn_A 36 DWVCPLCGVG 45 (54)
T ss_dssp TCBCTTTCCB
T ss_pred CCcCcCCCCc
Confidence 4689999974
No 12
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=87.67 E-value=0.22 Score=44.51 Aligned_cols=30 Identities=23% Similarity=0.784 Sum_probs=25.7
Q ss_pred ccccccCC--CCceeccCCCC-cccChhhhhhh
Q 045528 156 HFCTVCGF--SANYTCVKCGM-RFCCIRCQNIH 185 (195)
Q Consensus 156 ~fC~VCG~--~~~YtC~~Cg~-ryCS~~C~~~H 185 (195)
..|..|+. .+...|.+|+. +|||..|+..|
T Consensus 48 ~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~ 80 (429)
T 3qwp_A 48 VVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKA 80 (429)
T ss_dssp TBCTTTCCBCSSCEECTTTSCCEESSHHHHHHT
T ss_pred CcCcCCCCcCCCCCcCCCCCCcccCChhhhhhh
Confidence 48999996 55779999987 99999999754
No 13
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=87.20 E-value=0.22 Score=32.66 Aligned_cols=21 Identities=33% Similarity=1.107 Sum_probs=15.8
Q ss_pred cccccccCC-C----C----------ceeccCCCCc
Q 045528 155 RHFCTVCGF-S----A----------NYTCVKCGMR 175 (195)
Q Consensus 155 r~fC~VCG~-~----~----------~YtC~~Cg~r 175 (195)
...|.|||| . | .++||.||..
T Consensus 4 ~y~C~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCCeEEeCCcCCCcchhhCCCCCcCcCCCCc
Confidence 457999998 2 2 4599999974
No 14
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=85.76 E-value=0.31 Score=44.59 Aligned_cols=31 Identities=23% Similarity=0.564 Sum_probs=25.5
Q ss_pred cccccccCC--CCceeccCCCC-cccChhhhhhh
Q 045528 155 RHFCTVCGF--SANYTCVKCGM-RFCCIRCQNIH 185 (195)
Q Consensus 155 r~fC~VCG~--~~~YtC~~Cg~-ryCS~~C~~~H 185 (195)
..+|..|+. .+...|.+|+. .|||..|+..|
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~ 82 (490)
T 3n71_A 49 NFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDA 82 (490)
T ss_dssp TTBCTTTCCBCSCCEECTTTSCCEESSHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCCCCCCCcCcCCHHHhhhh
Confidence 359999975 55779999987 69999999754
No 15
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=84.94 E-value=0.42 Score=31.60 Aligned_cols=35 Identities=23% Similarity=0.574 Sum_probs=22.7
Q ss_pred CeEEEEeCCCCCCCCcccccccCC-------CCceeccCCCCcc
Q 045528 140 SYLRAAVGPPSKTSRRHFCTVCGF-------SANYTCVKCGMRF 176 (195)
Q Consensus 140 ~Y~~a~a~ps~~~P~r~fC~VCG~-------~~~YtC~~Cg~ry 176 (195)
.|.... .- .....+.||+.||- ...+.|.+||--|
T Consensus 6 ~~y~v~-~~-kv~~~~k~CP~CG~~~fm~~~~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 6 KLYEIK-DG-KVIRKNKFCPRCGPGVFMADHGDRWACGKCGYTE 47 (50)
T ss_dssp CCCEEC-SS-CEECSSEECSSSCSSCEEEECSSEEECSSSCCEE
T ss_pred eEEEEE-CC-EEEEecccCCCCCCceEEecCCCeEECCCCCCEE
Confidence 455554 22 23345679999996 3477999998643
No 16
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=83.48 E-value=0.57 Score=32.87 Aligned_cols=31 Identities=29% Similarity=0.777 Sum_probs=22.6
Q ss_pred CCCCCCCcccccccCC-CC--ceeccCCCCcccCh
Q 045528 148 PPSKTSRRHFCTVCGF-SA--NYTCVKCGMRFCCI 179 (195)
Q Consensus 148 ps~~~P~r~fC~VCG~-~~--~YtC~~Cg~ryCS~ 179 (195)
|+...+...-|..|+. ++ .|.| +||.-||+.
T Consensus 8 ~~~~~~~~~rC~~C~kkvgl~~f~C-rCg~~FC~~ 41 (64)
T 1wg2_A 8 PSRPVRPNNRCFSCNKKVGVMGFKC-KCGSTFCGS 41 (64)
T ss_dssp SSCCSCCSCSCTTTCCCCTTSCEEC-TTSCEECSS
T ss_pred CCCCCCcCCcChhhCCcccccCeEe-ecCCEeccc
Confidence 3333334457999997 45 5899 999999985
No 17
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=82.64 E-value=0.78 Score=33.05 Aligned_cols=28 Identities=29% Similarity=0.810 Sum_probs=20.9
Q ss_pred CCCcccccccCC-CC--ceeccCCCCcccChh
Q 045528 152 TSRRHFCTVCGF-SA--NYTCVKCGMRFCCIR 180 (195)
Q Consensus 152 ~P~r~fC~VCG~-~~--~YtC~~Cg~ryCS~~ 180 (195)
.....-|..|+. ++ .|.| +||.-||+..
T Consensus 22 k~~~~RC~~C~kkvgL~~f~C-rCg~~FCs~H 52 (74)
T 1wfp_A 22 KSTATRCLSCNKKVGVTGFKC-RCGSTFCGTH 52 (74)
T ss_dssp TCCCCBCSSSCCBCTTTCEEC-TTSCEECTTT
T ss_pred cccCccchhhcCcccccceEe-ccCCEecccc
Confidence 333457999985 33 6899 8999999863
No 18
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=79.11 E-value=0.71 Score=32.71 Aligned_cols=30 Identities=30% Similarity=0.547 Sum_probs=21.8
Q ss_pred cccccccCCCCceeccCCCCcccChhhhhh
Q 045528 155 RHFCTVCGFSANYTCVKCGMRFCCIRCQNI 184 (195)
Q Consensus 155 r~fC~VCG~~~~YtC~~Cg~ryCS~~C~~~ 184 (195)
.+.|.|||.+..++=..=..+|||.+|..+
T Consensus 9 ~~~CP~Cgkp~~W~~~~~~rPFCSeRCr~i 38 (68)
T 1lv3_A 9 TVNCPTCGKTVVWGEISPFRPFCSKRCQLI 38 (68)
T ss_dssp EEECTTTCCEEECSSSSSCCSSSSHHHHHH
T ss_pred cCcCCCCCCcccccccCCCCcccCHHHHhh
Confidence 358999998655433344678999999765
No 19
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=78.12 E-value=0.95 Score=30.40 Aligned_cols=23 Identities=35% Similarity=1.012 Sum_probs=17.6
Q ss_pred CcccccccCC-------CCceeccCCCCcc
Q 045528 154 RRHFCTVCGF-------SANYTCVKCGMRF 176 (195)
Q Consensus 154 ~r~fC~VCG~-------~~~YtC~~Cg~ry 176 (195)
.+.||..||. ...+.|.+||--+
T Consensus 17 ~~~fCPkCG~~~~ma~~~dr~~C~kCgyt~ 46 (55)
T 2k4x_A 17 KHRFCPRCGPGVFLAEHADRYSCGRCGYTE 46 (55)
T ss_dssp SSCCCTTTTTTCCCEECSSEEECTTTCCCE
T ss_pred ccccCcCCCCceeEeccCCEEECCCCCCEE
Confidence 3569999995 3577999998654
No 20
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=78.12 E-value=0.98 Score=30.05 Aligned_cols=8 Identities=63% Similarity=1.601 Sum_probs=6.2
Q ss_pred ccccccCC
Q 045528 156 HFCTVCGF 163 (195)
Q Consensus 156 ~fC~VCG~ 163 (195)
..|.||||
T Consensus 4 y~C~~CGy 11 (52)
T 1e8j_A 4 YVCTVCGY 11 (52)
T ss_dssp EECSSSCC
T ss_pred EEeCCCCe
Confidence 57888887
No 21
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=77.08 E-value=1.8 Score=30.29 Aligned_cols=24 Identities=38% Similarity=1.024 Sum_probs=19.6
Q ss_pred ccccccCC-CC--ceeccCCCCcccChh
Q 045528 156 HFCTVCGF-SA--NYTCVKCGMRFCCIR 180 (195)
Q Consensus 156 ~fC~VCG~-~~--~YtC~~Cg~ryCS~~ 180 (195)
.-|..|+. ++ .|.| +||.-||+..
T Consensus 16 ~rC~~C~kkvgl~~f~C-rCg~~FC~~H 42 (64)
T 1wfh_A 16 NRCTVCRKRVGLTGFMC-RCGTTFCGSH 42 (64)
T ss_dssp CCCTTTCCCCCTTCEEC-SSSCEECTTT
T ss_pred CcChhhCCccCccCEEe-ecCCEecccc
Confidence 46999997 45 5899 8999999863
No 22
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=76.91 E-value=0.74 Score=35.87 Aligned_cols=12 Identities=17% Similarity=0.570 Sum_probs=9.1
Q ss_pred CCcccccccCCC
Q 045528 153 SRRHFCTVCGFS 164 (195)
Q Consensus 153 P~r~fC~VCG~~ 164 (195)
|.+..|..||+.
T Consensus 68 p~~~~C~~CG~~ 79 (139)
T 3a43_A 68 EAVFKCRNCNYE 79 (139)
T ss_dssp CCEEEETTTCCE
T ss_pred CCcEECCCCCCE
Confidence 335699999993
No 23
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=76.09 E-value=0.97 Score=36.33 Aligned_cols=22 Identities=27% Similarity=0.872 Sum_probs=16.2
Q ss_pred CcccccccCCC--C--ceeccCCCCc
Q 045528 154 RRHFCTVCGFS--A--NYTCVKCGMR 175 (195)
Q Consensus 154 ~r~fC~VCG~~--~--~YtC~~Cg~r 175 (195)
....|.||||. + .-.||.||.+
T Consensus 137 ~~~~C~~CG~i~~~~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 137 KVYICPICGYTAVDEAPEYCPVCGAP 162 (170)
T ss_dssp CEEECTTTCCEEESCCCSBCTTTCCB
T ss_pred CeeEeCCCCCeeCCCCCCCCCCCCCC
Confidence 34589999992 3 2399999964
No 24
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.56 E-value=2.1 Score=30.22 Aligned_cols=24 Identities=29% Similarity=0.791 Sum_probs=19.5
Q ss_pred ccccccCC-CCc-----eeccCCCCcccChh
Q 045528 156 HFCTVCGF-SAN-----YTCVKCGMRFCCIR 180 (195)
Q Consensus 156 ~fC~VCG~-~~~-----YtC~~Cg~ryCS~~ 180 (195)
.-|.+|+. ++- |.| +||.-||+..
T Consensus 16 ~rC~~C~kk~gL~~~egf~C-rCg~~FC~~H 45 (67)
T 1x4w_A 16 RRCFQCQTKLELVQQELGSC-RCGYVFCMLH 45 (67)
T ss_dssp TBCSSSCCBCCHHHHHHHCC-SSSCCCCTTT
T ss_pred CcchhhCCeecccccCceEe-cCCCEehhcc
Confidence 46999997 542 799 9999999963
No 25
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=72.79 E-value=2.3 Score=31.23 Aligned_cols=24 Identities=33% Similarity=1.144 Sum_probs=19.5
Q ss_pred ccccccCC-CC---ceeccCCCCcccChh
Q 045528 156 HFCTVCGF-SA---NYTCVKCGMRFCCIR 180 (195)
Q Consensus 156 ~fC~VCG~-~~---~YtC~~Cg~ryCS~~ 180 (195)
.-|.+|+. ++ .|.| +||.-||+..
T Consensus 26 ~rC~~C~kkvgl~~~f~C-rCg~~FC~~H 53 (85)
T 1wff_A 26 KHCFLCGKKTGLATSFEC-RCGNNFCASH 53 (85)
T ss_dssp CBCSSSCCBCSSSSCEEC-TTCCEECTTT
T ss_pred ccchhhCCeecccCCeEc-CCCCEecccC
Confidence 46999996 44 6899 6999999863
No 26
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=72.48 E-value=1.5 Score=29.09 Aligned_cols=9 Identities=33% Similarity=1.043 Sum_probs=6.5
Q ss_pred eeccCCCCc
Q 045528 167 YTCVKCGMR 175 (195)
Q Consensus 167 YtC~~Cg~r 175 (195)
++||-||..
T Consensus 36 w~CP~Cg~~ 44 (52)
T 1yk4_A 36 WVCPLCGAP 44 (52)
T ss_dssp CBCTTTCCB
T ss_pred CcCCCCCCC
Confidence 478888863
No 27
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=72.10 E-value=1.1 Score=32.71 Aligned_cols=11 Identities=36% Similarity=0.902 Sum_probs=8.8
Q ss_pred CCcccccccCC
Q 045528 153 SRRHFCTVCGF 163 (195)
Q Consensus 153 P~r~fC~VCG~ 163 (195)
.....|.||||
T Consensus 25 m~~y~C~vCGy 35 (81)
T 2kn9_A 25 YKLFRCIQCGF 35 (81)
T ss_dssp CCEEEETTTCC
T ss_pred cceEEeCCCCE
Confidence 34579999998
No 28
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=71.99 E-value=1.5 Score=29.49 Aligned_cols=9 Identities=33% Similarity=1.221 Sum_probs=6.6
Q ss_pred eeccCCCCc
Q 045528 167 YTCVKCGMR 175 (195)
Q Consensus 167 YtC~~Cg~r 175 (195)
++||-||..
T Consensus 37 w~CP~Cga~ 45 (55)
T 2v3b_B 37 WVCPDCGVG 45 (55)
T ss_dssp CCCTTTCCC
T ss_pred CcCCCCCCC
Confidence 478888863
No 29
>1h7b_A Anaerobic ribonucleotide-triphosphate reductase large chain; oxidoreductase, allosteric regulation, substrate specificity; 2.45A {Bacteriophage T4} SCOP: c.7.1.3 PDB: 1h79_A* 1h7a_A* 1h78_A 1hk8_A*
Probab=71.11 E-value=0.93 Score=43.33 Aligned_cols=28 Identities=25% Similarity=0.688 Sum_probs=6.9
Q ss_pred eEEEEeCCCCCCCCcccccccCCCCc-------eeccCCCCc
Q 045528 141 YLRAAVGPPSKTSRRHFCTVCGFSAN-------YTCVKCGMR 175 (195)
Q Consensus 141 Y~~a~a~ps~~~P~r~fC~VCG~~~~-------YtC~~Cg~r 175 (195)
|++. -+....|.+|||.+. ..||.||..
T Consensus 533 Y~~~-------n~~~~~C~~CGy~~~~~~~~~~~~CP~Cg~~ 567 (605)
T 1h7b_A 533 YFGV-------NMPVDKCFTCGSTHEMTPTENGFVCSICGET 567 (605)
T ss_dssp EEEE-------ECCEEET------------------------
T ss_pred eEEe-------CCCCccCcccCCcCccCccccCCcCCCCCCC
Confidence 8874 233469999999873 579999963
No 30
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=70.86 E-value=1.7 Score=30.67 Aligned_cols=25 Identities=24% Similarity=0.689 Sum_probs=18.7
Q ss_pred CCCcccccccCCC------CceeccCCCCcc
Q 045528 152 TSRRHFCTVCGFS------ANYTCVKCGMRF 176 (195)
Q Consensus 152 ~P~r~fC~VCG~~------~~YtC~~Cg~ry 176 (195)
.+-...|.-||.. ....|+.||.|.
T Consensus 25 ~~v~Y~C~~CG~~~e~~~~d~irCp~CG~RI 55 (70)
T 1twf_L 25 ATLKYICAECSSKLSLSRTDAVRCKDCGHRI 55 (70)
T ss_dssp CCCCEECSSSCCEECCCTTSTTCCSSSCCCC
T ss_pred ceEEEECCCCCCcceeCCCCCccCCCCCceE
Confidence 4556799999975 246899999864
No 31
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=70.75 E-value=1.6 Score=30.72 Aligned_cols=9 Identities=33% Similarity=1.158 Sum_probs=7.5
Q ss_pred cccccccCC
Q 045528 155 RHFCTVCGF 163 (195)
Q Consensus 155 r~fC~VCG~ 163 (195)
...|.||||
T Consensus 7 ~y~C~vCGy 15 (70)
T 1dx8_A 7 KYECEACGY 15 (70)
T ss_dssp CEEETTTCC
T ss_pred eEEeCCCCE
Confidence 468999997
No 32
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=70.53 E-value=2 Score=28.42 Aligned_cols=30 Identities=27% Similarity=0.576 Sum_probs=19.1
Q ss_pred cccccCCCCceeccCCCCcccChhhhhhhc
Q 045528 157 FCTVCGFSANYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 157 fC~VCG~~~~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
.|..||......=.+=..+|||..|-..++
T Consensus 20 ~C~~CG~~i~~~~~~r~krFCS~sCR~~yn 49 (49)
T 2l8e_A 20 KCEYCGKYAPAEQFRGSKRFCSMTCAKRYN 49 (49)
T ss_dssp ECTTTCCEEEGGGCTTTSSSCSHHHHHHHC
T ss_pred cChhccCccccccCCCCCccCCHHHHhhhC
Confidence 588887744331122245999999987664
No 33
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=69.86 E-value=2.4 Score=21.38 Aligned_cols=21 Identities=24% Similarity=0.453 Sum_probs=17.4
Q ss_pred eeccCCCCcccChhhhhhhcc
Q 045528 167 YTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 167 YtC~~Cg~ryCS~~C~~~H~E 187 (195)
|.|..||..|-...-+..|..
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQR 22 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG
T ss_pred ccCCCCCCcCCCHHHHHHHHH
Confidence 788899999988888888764
No 34
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=69.82 E-value=2.7 Score=29.50 Aligned_cols=36 Identities=25% Similarity=0.533 Sum_probs=27.7
Q ss_pred CCCcccccccCC-C----------------CceeccCCCCcccChhhhhhhcc
Q 045528 152 TSRRHFCTVCGF-S----------------ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 152 ~P~r~fC~VCG~-~----------------~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
....+.|.+||. + -.|.|.-||..|-...-+..|..
T Consensus 25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~ 77 (85)
T 2lv2_A 25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHIN 77 (85)
T ss_dssp CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHH
T ss_pred CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCc
Confidence 345578999986 2 13889999999998888888843
No 35
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=69.20 E-value=2.1 Score=21.92 Aligned_cols=22 Identities=23% Similarity=0.471 Sum_probs=18.0
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 1rik_A 2 KFACPECPKRFMRSDHLTLHIL 23 (29)
T ss_dssp CEECSSSSCEESCSHHHHHHHT
T ss_pred CccCCCCCchhCCHHHHHHHHH
Confidence 3789999999988888888764
No 36
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=69.14 E-value=3 Score=36.33 Aligned_cols=33 Identities=18% Similarity=0.512 Sum_probs=24.1
Q ss_pred CCcccccccCC--CC----ceeccCCCCcccChhhhhhhc
Q 045528 153 SRRHFCTVCGF--SA----NYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 153 P~r~fC~VCG~--~~----~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
....||.+||. || .|.|..||.-+|. .|.....
T Consensus 355 ~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~-~C~~~~~ 393 (406)
T 2vrw_B 355 EETTSCKACQMLLRGTFYQGYRCYRCRAPAHK-ECLGRVP 393 (406)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECG-GGGGGSC
T ss_pred CCCCCCccccchhceeCCCCCCCCCCcCccch-hhhhhCC
Confidence 34469999995 65 5799999998876 5655333
No 37
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=69.11 E-value=1.8 Score=32.40 Aligned_cols=12 Identities=25% Similarity=0.849 Sum_probs=6.6
Q ss_pred CceeccCCCCcc
Q 045528 165 ANYTCVKCGMRF 176 (195)
Q Consensus 165 ~~YtC~~Cg~ry 176 (195)
|+-.|++|++||
T Consensus 57 G~q~CpqCktrY 68 (93)
T 1weo_A 57 GTQNCPQCKTRY 68 (93)
T ss_dssp SCSSCTTTCCCC
T ss_pred cCccccccCCcc
Confidence 344555555555
No 38
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=67.91 E-value=1.9 Score=35.35 Aligned_cols=21 Identities=29% Similarity=0.746 Sum_probs=16.1
Q ss_pred cccccccCCC--C--ceeccCCCCc
Q 045528 155 RHFCTVCGFS--A--NYTCVKCGMR 175 (195)
Q Consensus 155 r~fC~VCG~~--~--~YtC~~Cg~r 175 (195)
...|.||||. | ...||-||..
T Consensus 171 ~~~C~~CG~i~~g~~p~~CP~C~~~ 195 (202)
T 1yuz_A 171 FHLCPICGYIHKGEDFEKCPICFRP 195 (202)
T ss_dssp EEECSSSCCEEESSCCSBCTTTCCB
T ss_pred EEEECCCCCEEcCcCCCCCCCCCCC
Confidence 5699999993 3 2489999874
No 39
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=66.81 E-value=2.7 Score=21.29 Aligned_cols=22 Identities=23% Similarity=0.425 Sum_probs=17.1
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLR 23 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHH
Confidence 5788999998888777777653
No 40
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=66.77 E-value=1.8 Score=29.94 Aligned_cols=24 Identities=29% Similarity=0.589 Sum_probs=17.8
Q ss_pred cccccccCC-CCceeccCCCCcccC
Q 045528 155 RHFCTVCGF-SANYTCVKCGMRFCC 178 (195)
Q Consensus 155 r~fC~VCG~-~~~YtC~~Cg~ryCS 178 (195)
...|..||. .=+-.||.||....+
T Consensus 5 mr~C~~Cg~YTLk~~CP~CG~~t~~ 29 (60)
T 2aus_D 5 IRKCPKCGRYTLKETCPVCGEKTKV 29 (60)
T ss_dssp CEECTTTCCEESSSBCTTTCSBCEE
T ss_pred ceECCCCCCEEccccCcCCCCccCC
Confidence 458999985 336689999987654
No 41
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=66.53 E-value=3.8 Score=25.91 Aligned_cols=22 Identities=27% Similarity=0.940 Sum_probs=18.1
Q ss_pred CcccccccCC--CCceeccCCCCc
Q 045528 154 RRHFCTVCGF--SANYTCVKCGMR 175 (195)
Q Consensus 154 ~r~fC~VCG~--~~~YtC~~Cg~r 175 (195)
...||.+||. |-.|.|..|+..
T Consensus 13 ~pt~C~~C~~~l~qG~~C~~C~~~ 36 (52)
T 1faq_A 13 KLAFCDICQKFLLNGFRCQTCGYK 36 (52)
T ss_dssp SCEECTTSSSEECSEEECTTTTCC
T ss_pred CCcCCCCcccccccCCEeCCCCCe
Confidence 3469999997 888999998764
No 42
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.06 E-value=4.1 Score=28.60 Aligned_cols=29 Identities=28% Similarity=0.766 Sum_probs=21.3
Q ss_pred CcccccccCC--CC----ceeccCCCCcccChhhhh
Q 045528 154 RRHFCTVCGF--SA----NYTCVKCGMRFCCIRCQN 183 (195)
Q Consensus 154 ~r~fC~VCG~--~~----~YtC~~Cg~ryCS~~C~~ 183 (195)
...||.+|+. || .|.|..|+.. |-.+|..
T Consensus 27 ~pt~C~~C~~~lwGl~kqg~~C~~C~~~-~Hk~C~~ 61 (83)
T 2yuu_A 27 QPTFCSVCKDFVWGLNKQGYKCRQCNAA-IHKKCID 61 (83)
T ss_dssp SCCCCSSSCCCCCSSSCCEEEETTTCCE-ECTTGGG
T ss_pred CCcChhhcChhhccccccccccCCcCCe-eChhhhh
Confidence 3469999997 75 6899999765 5555544
No 43
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=65.47 E-value=1.8 Score=34.97 Aligned_cols=21 Identities=24% Similarity=0.730 Sum_probs=15.9
Q ss_pred cccccccCCC--C-c--eeccCCCCc
Q 045528 155 RHFCTVCGFS--A-N--YTCVKCGMR 175 (195)
Q Consensus 155 r~fC~VCG~~--~-~--YtC~~Cg~r 175 (195)
...|.||||. | . -.||.||.+
T Consensus 155 ~~~C~~CG~~~~g~~~p~~CP~C~~~ 180 (191)
T 1lko_A 155 KWRCRNCGYVHEGTGAPELCPACAHP 180 (191)
T ss_dssp EEEETTTCCEEEEEECCSBCTTTCCB
T ss_pred eEEECCCCCEeeCCCCCCCCCCCcCC
Confidence 4689999993 3 1 289999975
No 44
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=64.84 E-value=2.9 Score=21.11 Aligned_cols=21 Identities=19% Similarity=0.406 Sum_probs=16.1
Q ss_pred ceeccCCCCcccChhhhhhhc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
.|.|..||..|....-+..|.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~ 22 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHL 22 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHH
Confidence 378888898888777777664
No 45
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=64.77 E-value=3.8 Score=28.99 Aligned_cols=30 Identities=27% Similarity=0.742 Sum_probs=24.7
Q ss_pred ccccccCCCCceeccCC-CCcccChhhhhhh
Q 045528 156 HFCTVCGFSANYTCVKC-GMRFCCIRCQNIH 185 (195)
Q Consensus 156 ~fC~VCG~~~~YtC~~C-g~ryCS~~C~~~H 185 (195)
..|.||.--+.++|..| |.-||..==.+.|
T Consensus 9 pWC~ICneDAtlrC~gCdgDLYC~rC~rE~H 39 (67)
T 2d8v_A 9 PWCCICNEDATLRCAGCDGDLYCARCFREGH 39 (67)
T ss_dssp SSCTTTCSCCCEEETTTTSEEECSSHHHHHT
T ss_pred CeeEEeCCCCeEEecCCCCceehHHHHHHHc
Confidence 48999999999999999 9999985333455
No 46
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=64.76 E-value=3.1 Score=21.24 Aligned_cols=22 Identities=32% Similarity=0.644 Sum_probs=17.8
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 4788999999888888877764
No 47
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=64.26 E-value=2.7 Score=29.01 Aligned_cols=24 Identities=29% Similarity=0.672 Sum_probs=17.7
Q ss_pred cccccccCCC-CceeccCCCCcccC
Q 045528 155 RHFCTVCGFS-ANYTCVKCGMRFCC 178 (195)
Q Consensus 155 r~fC~VCG~~-~~YtC~~Cg~ryCS 178 (195)
...|..||.. -+..||.||..+-+
T Consensus 6 mr~C~~CgvYTLk~~CP~CG~~T~~ 30 (60)
T 2apo_B 6 MKKCPKCGLYTLKEICPKCGEKTVI 30 (60)
T ss_dssp CEECTTTCCEESSSBCSSSCSBCBC
T ss_pred ceeCCCCCCEeccccCcCCCCcCCC
Confidence 4589999853 36689999987644
No 48
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.19 E-value=3.1 Score=28.66 Aligned_cols=32 Identities=22% Similarity=0.510 Sum_probs=24.9
Q ss_pred ccccccCC-CC------------------ceeccCCCCcccChhhhhhhcc
Q 045528 156 HFCTVCGF-SA------------------NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 156 ~fC~VCG~-~~------------------~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.+||. +. .|.|.-||..|-...-+..|..
T Consensus 25 ~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~ 75 (98)
T 2gqj_A 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM 75 (98)
T ss_dssp CCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHH
T ss_pred cCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHH
Confidence 57889986 33 4789999999988888877754
No 49
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.68 E-value=2.6 Score=28.16 Aligned_cols=30 Identities=20% Similarity=0.375 Sum_probs=25.5
Q ss_pred CceeccCCCCcccChhhhhhhcccccCccc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDDTRCLKFV 194 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~EtRC~K~~ 194 (195)
+.|.||+|+..|=-+.=++.|.-.-|.+.+
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~v 40 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMCYCCPEMV 40 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHHHHCTTTC
T ss_pred CceeCCcccccccchHHHHhhhhhcCcchh
Confidence 578999999999999999999887776653
No 50
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=63.03 E-value=4.5 Score=25.28 Aligned_cols=22 Identities=36% Similarity=0.922 Sum_probs=16.9
Q ss_pred CcccccccCC--CC----ceeccCCCCc
Q 045528 154 RRHFCTVCGF--SA----NYTCVKCGMR 175 (195)
Q Consensus 154 ~r~fC~VCG~--~~----~YtC~~Cg~r 175 (195)
...||.+||. || .|.|..|+..
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~ 37 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMN 37 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCe
Confidence 3469999997 75 5799988764
No 51
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=62.54 E-value=2.9 Score=31.22 Aligned_cols=23 Identities=26% Similarity=0.655 Sum_probs=17.6
Q ss_pred CCcccccccCCC-----Cce-eccCCCCc
Q 045528 153 SRRHFCTVCGFS-----ANY-TCVKCGMR 175 (195)
Q Consensus 153 P~r~fC~VCG~~-----~~Y-tC~~Cg~r 175 (195)
|....|..||+. ..+ .||.||..
T Consensus 71 p~~~~C~~CG~~~e~~~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 71 KVELECKDCSHVFKPNALDYGVCEKCHSK 99 (119)
T ss_dssp CCEEECSSSSCEECSCCSTTCCCSSSSSC
T ss_pred cceEEcCCCCCEEeCCCCCCCcCccccCC
Confidence 345799999982 256 89999986
No 52
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=61.96 E-value=3.7 Score=20.89 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=16.7
Q ss_pred ceeccCCCCcccChhhhhhhc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
.|.|..||..|-...-+..|.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~ 23 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHL 23 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHH
Confidence 478889999888877777775
No 53
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=61.21 E-value=2.1 Score=31.49 Aligned_cols=11 Identities=27% Similarity=0.839 Sum_probs=8.8
Q ss_pred CCcccccccCC
Q 045528 153 SRRHFCTVCGF 163 (195)
Q Consensus 153 P~r~fC~VCG~ 163 (195)
.....|.||||
T Consensus 33 m~~y~C~vCGy 43 (87)
T 1s24_A 33 YLKWICITCGH 43 (87)
T ss_dssp CCEEEETTTTE
T ss_pred CceEECCCCCe
Confidence 34679999997
No 54
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=60.93 E-value=3.1 Score=27.80 Aligned_cols=21 Identities=33% Similarity=0.838 Sum_probs=16.0
Q ss_pred cccccccCC---CCceeccCCCCc
Q 045528 155 RHFCTVCGF---SANYTCVKCGMR 175 (195)
Q Consensus 155 r~fC~VCG~---~~~YtC~~Cg~r 175 (195)
.++|..||. ++...|-+||..
T Consensus 14 k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 14 KYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp EEECTTTCCEECTTCSSCSSSSSC
T ss_pred CccCCCCCCcCCCCceecCCCCCc
Confidence 478999987 556688888864
No 55
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=60.66 E-value=3.1 Score=21.42 Aligned_cols=22 Identities=18% Similarity=0.353 Sum_probs=17.5
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHH
Confidence 4889999998888877777753
No 56
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=60.65 E-value=8.3 Score=24.33 Aligned_cols=34 Identities=18% Similarity=0.392 Sum_probs=24.5
Q ss_pred CcccccccCCC-----------------CceeccCCCCcccChhhhhhhcc
Q 045528 154 RRHFCTVCGFS-----------------ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 154 ~r~fC~VCG~~-----------------~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
....|.+||.. ..|.|..||..|-...-+..|..
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~ 58 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHH
Confidence 34578888851 23889999998888777777754
No 57
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=59.63 E-value=3.8 Score=20.82 Aligned_cols=22 Identities=27% Similarity=0.492 Sum_probs=16.8
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~ 24 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLE 24 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 4788888988887777777754
No 58
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.11 E-value=6.3 Score=27.13 Aligned_cols=36 Identities=28% Similarity=0.700 Sum_probs=24.5
Q ss_pred CcccccccCC--CC----ceeccCCCCcccChhhhhhhccccc
Q 045528 154 RRHFCTVCGF--SA----NYTCVKCGMRFCCIRCQNIHDDTRC 190 (195)
Q Consensus 154 ~r~fC~VCG~--~~----~YtC~~Cg~ryCS~~C~~~H~EtRC 190 (195)
...||.+|+. || .|.|..|+.. |-.+|...-..+.|
T Consensus 27 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~-~Hk~C~~~v~~~~C 68 (74)
T 2db6_A 27 KPKFCDVCARMIVLNNKFGLRCKNCKTN-IHEHCQSYVEMQRC 68 (74)
T ss_dssp SCEECSSSCCEECHHHHEEEEESSSCCE-ECTTTTGGGSSSBC
T ss_pred CCcCchhcChhhccccCCccccCCCCCc-cChhHHhhCCCCcC
Confidence 3479999997 86 5899999765 55566554333234
No 59
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=58.75 E-value=5.1 Score=27.07 Aligned_cols=22 Identities=23% Similarity=0.647 Sum_probs=16.9
Q ss_pred CcccccccCC---CC--ceeccCCCCc
Q 045528 154 RRHFCTVCGF---SA--NYTCVKCGMR 175 (195)
Q Consensus 154 ~r~fC~VCG~---~~--~YtC~~Cg~r 175 (195)
+..+|.+||. +| .|+|..|+..
T Consensus 18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~~ 44 (61)
T 4b6d_A 18 KPESCVPCGKRIKFGKLSLKCRDCRVV 44 (61)
T ss_dssp SCEECTTTCCEECTTCEEEEESSSSCE
T ss_pred CCcccccccCEEEEeeEeeECCCCCCe
Confidence 3469999997 44 4899999763
No 60
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=58.23 E-value=4.5 Score=30.43 Aligned_cols=26 Identities=31% Similarity=0.557 Sum_probs=22.6
Q ss_pred CcccccccCCCCceeccCCCCcccCh
Q 045528 154 RRHFCTVCGFSANYTCVKCGMRFCCI 179 (195)
Q Consensus 154 ~r~fC~VCG~~~~YtC~~Cg~ryCS~ 179 (195)
.++.|.+||..+.+.|..|..-||..
T Consensus 57 p~c~C~~C~k~~~~~C~~Cp~sfC~~ 82 (107)
T 4gne_A 57 PWHQCDECSSAAVSFCEFCPHSFCKD 82 (107)
T ss_dssp GGGBCTTTCSBCCEECSSSSCEECTT
T ss_pred CCCCCCcCCCCCCcCcCCCCcchhhh
Confidence 35789999999999999999999753
No 61
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=57.68 E-value=4.5 Score=20.77 Aligned_cols=20 Identities=25% Similarity=0.386 Sum_probs=16.3
Q ss_pred ceeccCCCCcccChhhhhhh
Q 045528 166 NYTCVKCGMRFCCIRCQNIH 185 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H 185 (195)
.|.|..||..|-...-+..|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H 21 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRH 21 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHH
T ss_pred CcCCcccCcccCChHHHHHH
Confidence 37888899888888777777
No 62
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=57.33 E-value=4.4 Score=20.55 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=16.9
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTHIK 23 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHH
Confidence 3788888888888777777754
No 63
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=57.01 E-value=5.1 Score=21.58 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=18.2
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~ 28 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLK 28 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHG
T ss_pred CeeCCCCCcccCCHHHHHHHHH
Confidence 5889999999988888887754
No 64
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=56.72 E-value=9.8 Score=24.26 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=26.5
Q ss_pred CcccccccCCC-----------------CceeccCCCCcccChhhhhhhcc
Q 045528 154 RRHFCTVCGFS-----------------ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 154 ~r~fC~VCG~~-----------------~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
....|.+||.. ..|.|.-||..|-...-+..|..
T Consensus 16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~ 66 (74)
T 2lce_A 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66 (74)
T ss_dssp CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHH
Confidence 34679999962 24899999999998888887764
No 65
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.58 E-value=6.6 Score=27.76 Aligned_cols=22 Identities=32% Similarity=0.821 Sum_probs=17.5
Q ss_pred CcccccccCC--CC----ceeccCCCCc
Q 045528 154 RRHFCTVCGF--SA----NYTCVKCGMR 175 (195)
Q Consensus 154 ~r~fC~VCG~--~~----~YtC~~Cg~r 175 (195)
...||.+|+. || .|.|..|+..
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~C~~~ 54 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDTCDMN 54 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSSSCCE
T ss_pred CCcCCcccCccccccccCCCcCCCcCCc
Confidence 3469999997 75 5899999865
No 66
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=56.54 E-value=4.6 Score=28.48 Aligned_cols=31 Identities=32% Similarity=0.853 Sum_probs=24.9
Q ss_pred ccccccCC----CCceeccCCCCcccChhhhhh-hcc
Q 045528 156 HFCTVCGF----SANYTCVKCGMRFCCIRCQNI-HDD 187 (195)
Q Consensus 156 ~fC~VCG~----~~~YtC~~Cg~ryCS~~C~~~-H~E 187 (195)
..|.||.. .+...|..||..|| ..|+.. |..
T Consensus 4 ~~C~~C~~~~~~~av~~C~~C~~~~C-~~Cl~~~h~~ 39 (101)
T 2jun_A 4 VLCQFCDQDPAQDAVKTCVTCEVSYC-DECLKATHPN 39 (101)
T ss_dssp CBCTTCCSSSCCBCCEEETTTTEEEC-HHHHHHHSCS
T ss_pred CCCcCCCCCCCCCceEECCcCChHHh-HHHCHHHhcc
Confidence 47999972 45679999999999 678885 864
No 67
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=55.81 E-value=8.5 Score=24.77 Aligned_cols=35 Identities=34% Similarity=0.570 Sum_probs=27.3
Q ss_pred CcccccccCCC-----------------CceeccCCCCcccChhhhhhhccc
Q 045528 154 RRHFCTVCGFS-----------------ANYTCVKCGMRFCCIRCQNIHDDT 188 (195)
Q Consensus 154 ~r~fC~VCG~~-----------------~~YtC~~Cg~ryCS~~C~~~H~Et 188 (195)
....|.+||.. ..|.|..||..|-...-+..|..+
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~ 68 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGG
T ss_pred CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHH
Confidence 34689999862 248999999999998888888653
No 68
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=55.72 E-value=6.8 Score=26.08 Aligned_cols=22 Identities=36% Similarity=0.922 Sum_probs=16.8
Q ss_pred CcccccccCC--CC----ceeccCCCCc
Q 045528 154 RRHFCTVCGF--SA----NYTCVKCGMR 175 (195)
Q Consensus 154 ~r~fC~VCG~--~~----~YtC~~Cg~r 175 (195)
...||.+||. || .|.|..|+..
T Consensus 19 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 46 (65)
T 3uej_A 19 SPTFCDHCGSLLWGLVKQGLKCEDCGMN 46 (65)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCcccccChhhhccCceeeECCCCCCe
Confidence 3469999986 65 6799988753
No 69
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=55.71 E-value=5.3 Score=21.80 Aligned_cols=23 Identities=17% Similarity=0.469 Sum_probs=17.8
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 10 k~~~C~~C~k~f~~~~~l~~H~~ 32 (37)
T 1p7a_A 10 KPFQCPDCDRSFSRSDHLALHRK 32 (37)
T ss_dssp SSBCCTTTCCCBSSHHHHHHHHG
T ss_pred CCccCCCCCcccCcHHHHHHHHH
Confidence 35888889988888877777754
No 70
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=55.54 E-value=3.8 Score=31.81 Aligned_cols=21 Identities=33% Similarity=0.784 Sum_probs=15.5
Q ss_pred cccccccCC-CC----ceeccCCCCc
Q 045528 155 RHFCTVCGF-SA----NYTCVKCGMR 175 (195)
Q Consensus 155 r~fC~VCG~-~~----~YtC~~Cg~r 175 (195)
..-|.-||. +. ...||.||..
T Consensus 132 ~y~C~~Cg~~~~~~~~~~~Cp~CG~~ 157 (165)
T 2lcq_A 132 RYVCIGCGRKFSTLPPGGVCPDCGSK 157 (165)
T ss_dssp CEEESSSCCEESSCCGGGBCTTTCCB
T ss_pred EEECCCCCCcccCCCCCCcCCCCCCc
Confidence 358999995 32 3389999976
No 71
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=55.07 E-value=7.5 Score=26.05 Aligned_cols=29 Identities=28% Similarity=0.871 Sum_probs=21.0
Q ss_pred CcccccccCC--CC----ceeccCCCCcccChhhhh
Q 045528 154 RRHFCTVCGF--SA----NYTCVKCGMRFCCIRCQN 183 (195)
Q Consensus 154 ~r~fC~VCG~--~~----~YtC~~Cg~ryCS~~C~~ 183 (195)
...||.+|+. || .|.|..|+.. |-.+|..
T Consensus 23 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~-~Hk~C~~ 57 (66)
T 1y8f_A 23 TPTYCYECEGLLWGIARQGMRCTECGVK-CHEKCQD 57 (66)
T ss_dssp SCCCCTTTCCCCCSSCCEEEEETTTCCE-ECTTHHH
T ss_pred CCcChhhcChhhcccCcceeEcCCCCCe-eCHHHHh
Confidence 3469999997 76 5799988765 5555544
No 72
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=54.93 E-value=7.3 Score=25.98 Aligned_cols=27 Identities=37% Similarity=0.891 Sum_probs=19.1
Q ss_pred CcccccccCC--CC----ceeccCCCCcccChhh
Q 045528 154 RRHFCTVCGF--SA----NYTCVKCGMRFCCIRC 181 (195)
Q Consensus 154 ~r~fC~VCG~--~~----~YtC~~Cg~ryCS~~C 181 (195)
...||.+|+. || .|.|..|+.. |-.+|
T Consensus 22 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~-~Hk~C 54 (65)
T 2enz_A 22 SPTFCEHCGTLLWGLARQGLKCDACGMN-VHHRC 54 (65)
T ss_dssp SCCBCSSSCCBCCCSSSCSEEESSSCCE-ECTTT
T ss_pred CCcCchhcChhheecCCcccccCCCCCc-cCHhH
Confidence 3469999997 75 5899988764 33444
No 73
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=54.72 E-value=6.8 Score=28.33 Aligned_cols=30 Identities=17% Similarity=0.436 Sum_probs=19.9
Q ss_pred CCcccccccCC--CC------ceeccCCCCcccChhhhh
Q 045528 153 SRRHFCTVCGF--SA------NYTCVKCGMRFCCIRCQN 183 (195)
Q Consensus 153 P~r~fC~VCG~--~~------~YtC~~Cg~ryCS~~C~~ 183 (195)
....||.+||. || .|.|..|+.. |-.+|..
T Consensus 33 ~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~-~HkrC~~ 70 (84)
T 2row_A 33 HFPTNCEACMKPLWHMFKPPPALECRRCHIK-CHKDHMD 70 (84)
T ss_dssp SSCEECSSSSSEECCSSSCCCEEEESSSCCE-EEHHHHH
T ss_pred CCCcchhhcCHhhhccccCCCCCEecCCCCc-cchhHhC
Confidence 34479999996 87 6678777542 4445544
No 74
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=53.65 E-value=4.2 Score=28.73 Aligned_cols=38 Identities=26% Similarity=0.674 Sum_probs=22.7
Q ss_pred CcccccccCCC-------CceeccCCCCcccChhhhhh---hcccccC
Q 045528 154 RRHFCTVCGFS-------ANYTCVKCGMRFCCIRCQNI---HDDTRCL 191 (195)
Q Consensus 154 ~r~fC~VCG~~-------~~YtC~~Cg~ryCS~~C~~~---H~EtRC~ 191 (195)
...+|.-|++. ...+|+.||..||..==..- |....|.
T Consensus 24 ~~~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w~~~H~~~sC~ 71 (86)
T 2ct7_A 24 KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCE 71 (86)
T ss_dssp CEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCCTTTTTSCHH
T ss_pred CEeECcCCCchheecCCCCceEeCCCCCccccccCCchhhcCCCCChH
Confidence 34456666651 23588888888885332333 7666664
No 75
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.64 E-value=5.9 Score=21.55 Aligned_cols=22 Identities=23% Similarity=0.347 Sum_probs=17.3
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLR 30 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHH
T ss_pred CEECCCCCceeCCHHHHHHHHH
Confidence 5888889998888777777754
No 76
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=52.79 E-value=9.1 Score=35.31 Aligned_cols=36 Identities=19% Similarity=0.532 Sum_probs=25.6
Q ss_pred CCcccccccCC--CC----ceeccCCCCcccChhhhhhhcccccC
Q 045528 153 SRRHFCTVCGF--SA----NYTCVKCGMRFCCIRCQNIHDDTRCL 191 (195)
Q Consensus 153 P~r~fC~VCG~--~~----~YtC~~Cg~ryCS~~C~~~H~EtRC~ 191 (195)
....+|.+||. || .|.|..||...|. .|...- ..|.
T Consensus 527 ~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk-~C~~~v--~~C~ 568 (587)
T 3ky9_A 527 EETTSCKACQMLLRGTFYQGYRCHRCRASAHK-ECLGRV--PPCG 568 (587)
T ss_dssp SSCCBCTTTCSBCCSSSCCEEEETTTCCEECS-GGGGGS--CCC-
T ss_pred CCCcccccccccccccccCCcCCCCCCCccch-hhhhcC--CCCC
Confidence 44569999986 56 6899999998776 466644 3553
No 77
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=52.52 E-value=6.5 Score=20.95 Aligned_cols=22 Identities=23% Similarity=0.389 Sum_probs=17.7
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|.-||..|-...-+..|..
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~ 28 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIR 28 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHH
T ss_pred CeECCCCcchhCCHHHHHHHHH
Confidence 5889999999888887777754
No 78
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=52.35 E-value=10 Score=30.27 Aligned_cols=55 Identities=20% Similarity=0.385 Sum_probs=34.9
Q ss_pred ccccHHHHHHHhhhccCCCCCCCeEEEEeCCCCCC---CCcccccc--cCC------CCceeccCCCCc
Q 045528 118 APRSFLELLHEANLESLPPHVPSYLRAAVGPPSKT---SRRHFCTV--CGF------SANYTCVKCGMR 175 (195)
Q Consensus 118 ~rknf~~lLeE~~l~~~~~~~p~Y~~a~a~ps~~~---P~r~fC~V--CG~------~~~YtC~~Cg~r 175 (195)
-+++++++.++. +- ..+.|-|++..|.-.... .--.-|.. |+. .|.|.|.+|+.-
T Consensus 6 ~~kti~qi~~~~-lg--~~~k~~~f~v~atI~~i~~d~~~Y~aC~~~~CnKKv~~~~~g~~~CekC~~~ 71 (181)
T 1l1o_C 6 NWKTLYEVKSEN-LG--QGDKPDYFSSVATVVYLRKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTE 71 (181)
T ss_dssp CBCCHHHHHHHT-TT--SSSSCEEEEEEEEEEEECCSTTEEEBCCSTTCCCBCEEETTTEEEETTTTEE
T ss_pred ceEEHHHHhhhc-cC--CCCCCcEEEEEEEEEEEeCCCEEECCCCchhcCCccccCCCCeEECCCCCCc
Confidence 378899988774 21 235677888877422111 11336888 886 367899999864
No 79
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.24 E-value=6 Score=21.97 Aligned_cols=21 Identities=24% Similarity=0.507 Sum_probs=17.7
Q ss_pred CceeccCCCCcccChhhhhhh
Q 045528 165 ANYTCVKCGMRFCCIRCQNIH 185 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H 185 (195)
-.|.|..||..|-...-+..|
T Consensus 8 k~~~C~~C~k~f~~~~~L~~H 28 (37)
T 2elm_A 8 HLYYCSQCHYSSITKNCLKRH 28 (37)
T ss_dssp CEEECSSSSCEEECHHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHHH
Confidence 358999999999888888887
No 80
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=57.14 E-value=3.1 Score=21.01 Aligned_cols=20 Identities=35% Similarity=0.654 Sum_probs=13.9
Q ss_pred eeccCCCCcccChhhhhhhc
Q 045528 167 YTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 167 YtC~~Cg~ryCS~~C~~~H~ 186 (195)
|.|..||..|-...=+..|.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~ 22 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQLANHI 22 (26)
Confidence 67777887777666666664
No 81
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=51.69 E-value=5 Score=33.97 Aligned_cols=21 Identities=29% Similarity=0.953 Sum_probs=16.0
Q ss_pred ccccccCCCC-------ceeccCCCCcc
Q 045528 156 HFCTVCGFSA-------NYTCVKCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~~~-------~YtC~~Cg~ry 176 (195)
.||+.||.+- ...|+.||..+
T Consensus 108 ~fC~~CG~~~~~~~~~~~~~C~~C~~~~ 135 (269)
T 1vk6_A 108 KYCGYCGHEMYPSKTEWAMLCSHCRERY 135 (269)
T ss_dssp SBCTTTCCBEEECSSSSCEEESSSSCEE
T ss_pred CccccCCCcCccCCCceeeeCCCCCCEe
Confidence 5999999744 44899998743
No 82
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=51.41 E-value=6.8 Score=19.74 Aligned_cols=22 Identities=18% Similarity=0.368 Sum_probs=15.9
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~ 23 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRHYR 23 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHH
Confidence 3678888888877777776653
No 83
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=56.71 E-value=3.2 Score=21.31 Aligned_cols=22 Identities=23% Similarity=0.502 Sum_probs=16.2
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVR 24 (30)
Confidence 4778888888877777777754
No 84
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=50.95 E-value=6.5 Score=21.36 Aligned_cols=22 Identities=23% Similarity=0.463 Sum_probs=17.3
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 2 p~~C~~C~k~F~~~~~L~~H~~ 23 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKHIT 23 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHH
T ss_pred cccCCCCCchhCCHHHHHHHHH
Confidence 3778888998888888877754
No 85
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=50.64 E-value=7.4 Score=24.67 Aligned_cols=21 Identities=29% Similarity=0.833 Sum_probs=15.9
Q ss_pred ccccccCC--------CCceeccCCCCcc
Q 045528 156 HFCTVCGF--------SANYTCVKCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~--------~~~YtC~~Cg~ry 176 (195)
..|.+||. .+.+.|..||.-|
T Consensus 6 ~~CP~C~~~~l~~d~~~gelvC~~CG~v~ 34 (50)
T 1pft_A 6 KVCPACESAELIYDPERGEIVCAKCGYVI 34 (50)
T ss_dssp CSCTTTSCCCEEEETTTTEEEESSSCCBC
T ss_pred EeCcCCCCcceEEcCCCCeEECcccCCcc
Confidence 46999986 2567999998765
No 86
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=50.56 E-value=8.3 Score=26.72 Aligned_cols=24 Identities=29% Similarity=0.711 Sum_probs=18.2
Q ss_pred CCcccccccCCC------CceeccCCCCcc
Q 045528 153 SRRHFCTVCGFS------ANYTCVKCGMRF 176 (195)
Q Consensus 153 P~r~fC~VCG~~------~~YtC~~Cg~ry 176 (195)
+-...|.-||.. ..++|+.||-|+
T Consensus 19 ~v~Y~C~~Cg~~~~l~~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQAKEVIRCRECGHRV 48 (63)
T ss_dssp CCCCBCSSSCCBCCCCSSSCCCCSSSCCCC
T ss_pred CeEEECCCCCCeeecCCCCceECCCCCcEE
Confidence 455799999972 246999999875
No 87
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.94 E-value=7.4 Score=20.95 Aligned_cols=22 Identities=23% Similarity=0.431 Sum_probs=17.0
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLR 30 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHH
Confidence 5788888988888777777753
No 88
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=49.24 E-value=5.8 Score=27.62 Aligned_cols=20 Identities=20% Similarity=0.547 Sum_probs=15.4
Q ss_pred cccccCCC-------CceeccCCCCcc
Q 045528 157 FCTVCGFS-------ANYTCVKCGMRF 176 (195)
Q Consensus 157 fC~VCG~~-------~~YtC~~Cg~ry 176 (195)
.|.+|+.. +...|+.||..|
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (68)
T 2hf1_A 10 VCPLCKGPLVFDKSKDELICKGDRLAF 36 (68)
T ss_dssp BCTTTCCBCEEETTTTEEEETTTTEEE
T ss_pred ECCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 68888863 556899998876
No 89
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.14 E-value=9.3 Score=26.33 Aligned_cols=22 Identities=23% Similarity=0.490 Sum_probs=18.6
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 80 ~~~C~~C~k~f~~~~~L~~H~~ 101 (115)
T 2dmi_A 80 VLKCMYCGHSFESLQDLSVHMI 101 (115)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHH
T ss_pred ceECCCCCCccCCHHHHHHHHH
Confidence 5899999999998888887754
No 90
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.91 E-value=8 Score=20.96 Aligned_cols=23 Identities=22% Similarity=0.270 Sum_probs=17.5
Q ss_pred ceeccCCCCcccChhhhhhhccc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDDT 188 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~Et 188 (195)
.|.|..||..|-...=+..|..+
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 57888888888887777777543
No 91
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=48.88 E-value=5.9 Score=27.56 Aligned_cols=21 Identities=10% Similarity=0.156 Sum_probs=15.5
Q ss_pred ccccccCCC-------CceeccCCCCcc
Q 045528 156 HFCTVCGFS-------ANYTCVKCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~~-------~~YtC~~Cg~ry 176 (195)
-.|.+|+.. +...|+.||..|
T Consensus 9 L~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (68)
T 2jr6_A 9 LVCPVTKGRLEYHQDKQELWSRQAKLAY 36 (68)
T ss_dssp CBCSSSCCBCEEETTTTEEEETTTTEEE
T ss_pred eECCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 378888864 455788888776
No 92
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=48.47 E-value=8.2 Score=22.91 Aligned_cols=19 Identities=26% Similarity=0.964 Sum_probs=14.1
Q ss_pred cccccCC---CCceeccCCCCc
Q 045528 157 FCTVCGF---SANYTCVKCGMR 175 (195)
Q Consensus 157 fC~VCG~---~~~YtC~~Cg~r 175 (195)
.|..||+ ...-.|.+||++
T Consensus 7 ~C~~C~~~Nfa~r~~C~~C~~p 28 (32)
T 2lk0_A 7 LCNKCCLNNFRKRLKCFRCGAD 28 (32)
T ss_dssp ECTTTCCEEETTCCBCTTTCCB
T ss_pred CcCcCcCCcChhcceecCCCCc
Confidence 6777876 446689999874
No 93
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.25 E-value=7.9 Score=20.83 Aligned_cols=22 Identities=23% Similarity=0.368 Sum_probs=16.2
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKL 30 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHH
T ss_pred CeecCcCCCCcCchHHHHHHHH
Confidence 5778888888877777776653
No 94
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=48.18 E-value=15 Score=24.18 Aligned_cols=19 Identities=26% Similarity=0.488 Sum_probs=8.7
Q ss_pred eeccCCCCcccChhhhhhh
Q 045528 167 YTCVKCGMRFCCIRCQNIH 185 (195)
Q Consensus 167 YtC~~Cg~ryCS~~C~~~H 185 (195)
|.|..||..|-...=+..|
T Consensus 37 ~~C~~C~~~f~~~~~l~~H 55 (96)
T 2dmd_A 37 YKCKTCDYAAADSSSLNKH 55 (96)
T ss_dssp EECSSSCCEESSHHHHHHH
T ss_pred EeCCCCCCccCCHHHHHHH
Confidence 4555555544444433333
No 95
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=47.93 E-value=4.4 Score=21.87 Aligned_cols=22 Identities=23% Similarity=0.457 Sum_probs=16.7
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 2 p~~C~~C~k~f~~~~~L~~H~~ 23 (32)
T 2kfq_A 2 AFACPACPKRFMRSDALSKHIK 23 (32)
T ss_dssp CSSSSSSCTTHHHHHTTSSSTT
T ss_pred CCCCCCCCcccCCHHHHHHHHH
Confidence 3788888988887777777754
No 96
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=47.62 E-value=11 Score=26.69 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=25.3
Q ss_pred ccccccCC---------------CCceeccCCCCcccChhhhhhhcc
Q 045528 156 HFCTVCGF---------------SANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 156 ~fC~VCG~---------------~~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.+||. ...|.|.-||..|-...-+..|..
T Consensus 75 ~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~ 121 (129)
T 2wbt_A 75 FVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVC 121 (129)
T ss_dssp EECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHH
T ss_pred eECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHH
Confidence 57999986 235899999999988888877754
No 97
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=47.45 E-value=7 Score=29.08 Aligned_cols=23 Identities=30% Similarity=0.687 Sum_probs=16.7
Q ss_pred cccccccCCC-------CceeccCCCCccc
Q 045528 155 RHFCTVCGFS-------ANYTCVKCGMRFC 177 (195)
Q Consensus 155 r~fC~VCG~~-------~~YtC~~Cg~ryC 177 (195)
.++|+.||.. |...|.+||.-+-
T Consensus 36 ky~CpfCgk~~vkR~a~GIW~C~~C~~~~A 65 (92)
T 3izc_m 36 RYDCSFCGKKTVKRGAAGIWTCSCCKKTVA 65 (92)
T ss_dssp CCCCSSSCSSCCEEEETTEEECTTTCCEEE
T ss_pred CCcCCCCCCceeeecccceEEcCCCCCEEe
Confidence 4789999964 4457999977553
No 98
>2ffw_A Midline-1; B-BOX, ring finger, zinc-finger, ligase; NMR {Homo sapiens}
Probab=46.95 E-value=12 Score=25.95 Aligned_cols=34 Identities=29% Similarity=0.832 Sum_probs=25.8
Q ss_pred cccccccC----CCCceeccCCCCcccChhhhhh-hcccc
Q 045528 155 RHFCTVCG----FSANYTCVKCGMRFCCIRCQNI-HDDTR 189 (195)
Q Consensus 155 r~fC~VCG----~~~~YtC~~Cg~ryCS~~C~~~-H~EtR 189 (195)
..+|.+|- ..+.-+|..|...|| -.|+.. |.+..
T Consensus 30 ~v~C~~C~~~~~~~A~ksCl~C~~s~C-~~hl~~~H~~~~ 68 (78)
T 2ffw_A 30 KVLCQFCDQDPAQDAVKTCVTCEVSYC-DECLKATHPNKK 68 (78)
T ss_dssp CCBCSSCCSSSCCBCCEEETTTTEEEC-HHHHHHHSCCCS
T ss_pred CccCCcCCCCCCCCCeeEccCccchhh-hhhhHhhcCCCC
Confidence 35899995 344569999999999 578885 87643
No 99
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=46.81 E-value=5.9 Score=30.05 Aligned_cols=23 Identities=22% Similarity=0.580 Sum_probs=16.8
Q ss_pred cccccccCC-------CCceeccCCCCccc
Q 045528 155 RHFCTVCGF-------SANYTCVKCGMRFC 177 (195)
Q Consensus 155 r~fC~VCG~-------~~~YtC~~Cg~ryC 177 (195)
.++|+.||. .|...|.+||.-+-
T Consensus 36 ky~CpfCgk~~vKR~a~GIW~C~kCg~~~A 65 (103)
T 4a17_Y 36 KYGCPFCGKVAVKRAAVGIWKCKPCKKIIA 65 (103)
T ss_dssp CEECTTTCCEEEEEEETTEEEETTTTEEEE
T ss_pred CCCCCCCCCceeeecCcceEEcCCCCCEEe
Confidence 479999995 44567988876553
No 100
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=46.70 E-value=7 Score=27.26 Aligned_cols=20 Identities=15% Similarity=0.511 Sum_probs=15.2
Q ss_pred cccccCCC-------CceeccCCCCcc
Q 045528 157 FCTVCGFS-------ANYTCVKCGMRF 176 (195)
Q Consensus 157 fC~VCG~~-------~~YtC~~Cg~ry 176 (195)
.|.+|+.. +...|+.||..|
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (69)
T 2pk7_A 10 ACPICKGPLKLSADKTELISKGAGLAY 36 (69)
T ss_dssp CCTTTCCCCEECTTSSEEEETTTTEEE
T ss_pred eCCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 68888863 456899998876
No 101
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.54 E-value=9.8 Score=21.27 Aligned_cols=24 Identities=25% Similarity=0.484 Sum_probs=18.8
Q ss_pred CceeccCCCCcccChhhhhhhccc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDDT 188 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~Et 188 (195)
..|.|..||..|-...-+..|..+
T Consensus 10 k~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2ytb_A 10 KPYRCDQCGKAFSQKGSLIVHIRV 33 (42)
T ss_dssp CSBCCTTTTCCBSSHHHHHTTGGG
T ss_pred CCeeCCCccchhCCHHHHHHHHHH
Confidence 358888899998888888877653
No 102
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=46.51 E-value=14 Score=26.45 Aligned_cols=24 Identities=29% Similarity=0.891 Sum_probs=19.4
Q ss_pred ccccccCC-CC--ceeccCCCCcccChh
Q 045528 156 HFCTVCGF-SA--NYTCVKCGMRFCCIR 180 (195)
Q Consensus 156 ~fC~VCG~-~~--~YtC~~Cg~ryCS~~ 180 (195)
.-|.+|+. ++ .+.|. ||.-||+..
T Consensus 26 nRC~~CrKkvgL~gf~Cr-Cg~~FCs~H 52 (74)
T 1wfl_A 26 NRCFMCRKKVGLTGFDCR-CGNLFCGLH 52 (74)
T ss_dssp TBCSSSCCBCGGGCEECT-TSCEECSSS
T ss_pred CcChhhCCcccccCeecC-CCCEechhc
Confidence 46999987 34 58999 999999963
No 103
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}
Probab=46.43 E-value=9.9 Score=24.61 Aligned_cols=30 Identities=23% Similarity=0.665 Sum_probs=16.2
Q ss_pred cccccCCCCce-eccCCCCcccChhhhhhhc
Q 045528 157 FCTVCGFSANY-TCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 157 fC~VCG~~~~Y-tC~~Cg~ryCS~~C~~~H~ 186 (195)
.|..||..+.- +=.+=..||||+.|-.-.+
T Consensus 8 ~CE~CG~~g~~~~F~~ksKRFCS~~Carry~ 38 (43)
T 2w0t_A 8 VCEMCGIVGTREAFFSKTKRFCSVSCSRSYS 38 (43)
T ss_dssp ECTTTCCEEETTTSCTTTSSSSSHHHHHHHH
T ss_pred hhhhhcCcchhhhhccCCcceechhhhCccc
Confidence 46666653311 1001134899999976554
No 104
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=52.10 E-value=4.2 Score=20.86 Aligned_cols=21 Identities=29% Similarity=0.475 Sum_probs=14.9
Q ss_pred eeccCCCCcccChhhhhhhcc
Q 045528 167 YTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 167 YtC~~Cg~ryCS~~C~~~H~E 187 (195)
|.|..||..|-...-+..|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 677778887777666666653
No 105
>3dzy_D Peroxisome proliferator-activated receptor gamma; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_D* 3e00_D* 2env_A
Probab=46.07 E-value=2.7 Score=37.69 Aligned_cols=20 Identities=30% Similarity=0.531 Sum_probs=14.7
Q ss_pred cccccccCC------CCceeccCCCC
Q 045528 155 RHFCTVCGF------SANYTCVKCGM 174 (195)
Q Consensus 155 r~fC~VCG~------~~~YtC~~Cg~ 174 (195)
...|.|||. +|.++|-.|..
T Consensus 50 ~~~C~vC~~~~~g~hygv~~C~~C~~ 75 (419)
T 3dzy_D 50 AIECRVCGDKASGFHYGVHACEGCKG 75 (419)
T ss_dssp CCCCSSSCSCCCSBCSSSBCCHHHHH
T ss_pred CCcCeECCCcCCCCccCcccchhhhH
Confidence 358999996 45568888853
No 106
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=46.00 E-value=11 Score=25.66 Aligned_cols=18 Identities=28% Similarity=0.681 Sum_probs=8.0
Q ss_pred ccccccCC--CCceeccCCC
Q 045528 156 HFCTVCGF--SANYTCVKCG 173 (195)
Q Consensus 156 ~fC~VCG~--~~~YtC~~Cg 173 (195)
..|..||. ....-|+.||
T Consensus 31 ~~c~~cG~~~~pH~vc~~CG 50 (60)
T 2zjr_Z 31 TECPQCHGKKLSHHICPNCG 50 (60)
T ss_dssp EECTTTCCEECTTBCCTTTC
T ss_pred eECCCCCCEeCCceEcCCCC
Confidence 34555554 2233455554
No 107
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=44.89 E-value=9.2 Score=25.12 Aligned_cols=27 Identities=30% Similarity=0.853 Sum_probs=18.9
Q ss_pred ccccccCCCCce-eccCCCCcccChhhhh
Q 045528 156 HFCTVCGFSANY-TCVKCGMRFCCIRCQN 183 (195)
Q Consensus 156 ~fC~VCG~~~~Y-tC~~Cg~ryCS~~C~~ 183 (195)
-+|.|||..+.. .|-.|...| =+.|+.
T Consensus 6 ~~C~vC~~~g~ll~Cd~C~~~f-H~~Cl~ 33 (60)
T 2puy_A 6 DFCSVCRKSGQLLMCDTCSRVY-HLDCLD 33 (60)
T ss_dssp SSCTTTCCCSSCEECSSSSCEE-CGGGSS
T ss_pred CCCcCCCCCCcEEEcCCCCcCE-ECCcCC
Confidence 489999988866 888887544 234544
No 108
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.68 E-value=11 Score=21.70 Aligned_cols=23 Identities=26% Similarity=0.583 Sum_probs=18.5
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yth_A 11 KPFQCEECGKRFTQNSHLHSHQR 33 (46)
T ss_dssp SSBCCSSSCCCBSSHHHHHHHGG
T ss_pred cCCCCCCCCcccCCHHHHHHHHH
Confidence 35889999999988888887754
No 109
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.51 E-value=9.9 Score=20.55 Aligned_cols=22 Identities=14% Similarity=0.271 Sum_probs=16.9
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMN 30 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHH
T ss_pred CccCCCCCchhCCHHHHHHHHH
Confidence 5788888888888777777753
No 110
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.96 E-value=11 Score=21.67 Aligned_cols=24 Identities=29% Similarity=0.607 Sum_probs=19.0
Q ss_pred CceeccCCCCcccChhhhhhhccc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDDT 188 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~Et 188 (195)
-.|.|..||..|-...-+..|..+
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2epv_A 11 KPYECNECGKAFIWKSLLIVHERT 34 (44)
T ss_dssp CSEECSSSCCEESSHHHHHHHHGG
T ss_pred cCeECCCCCcccCchHHHHHHHhH
Confidence 358899999999888888877653
No 111
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=43.82 E-value=21 Score=24.00 Aligned_cols=34 Identities=26% Similarity=0.472 Sum_probs=25.0
Q ss_pred CcccccccCC-C----------------CceeccCCCCcccChhhhhhhcc
Q 045528 154 RRHFCTVCGF-S----------------ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 154 ~r~fC~VCG~-~----------------~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
....|.+||. + ..|.|..||..|-...-+..|..
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~ 66 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY 66 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGG
T ss_pred cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHH
Confidence 3457999986 2 24889999998888777777654
No 112
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=43.79 E-value=7.9 Score=27.06 Aligned_cols=21 Identities=29% Similarity=0.562 Sum_probs=15.9
Q ss_pred ccccccCCC-------CceeccCCCCcc
Q 045528 156 HFCTVCGFS-------ANYTCVKCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~~-------~~YtC~~Cg~ry 176 (195)
-.|.+|+.. +...|+.||..|
T Consensus 9 L~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (70)
T 2js4_A 9 LVCPVCKGRLEFQRAQAELVCNADRLAF 36 (70)
T ss_dssp CBCTTTCCBEEEETTTTEEEETTTTEEE
T ss_pred eECCCCCCcCEEeCCCCEEEcCCCCcee
Confidence 378899863 456899998877
No 113
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=43.67 E-value=9.3 Score=21.23 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=17.6
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|.-||..|-...-+..|..
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~ 27 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMN 27 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHH
T ss_pred ceECCCCCcccCCHHHHHHHHH
Confidence 5888889998888887777754
No 114
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.49 E-value=8 Score=21.02 Aligned_cols=23 Identities=26% Similarity=0.436 Sum_probs=17.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...=+..|..
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~ 30 (37)
T 2elo_A 8 RSYSCPVCEKSFSEDRLIKSHIK 30 (37)
T ss_dssp CCCEETTTTEECSSHHHHHHHHH
T ss_pred CCcCCCCCCCccCCHHHHHHHHH
Confidence 35788888888888777776654
No 115
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=43.35 E-value=12 Score=33.65 Aligned_cols=28 Identities=25% Similarity=0.793 Sum_probs=20.8
Q ss_pred CcccccccCC--CC----ceeccCCCCcccChhhh
Q 045528 154 RRHFCTVCGF--SA----NYTCVKCGMRFCCIRCQ 182 (195)
Q Consensus 154 ~r~fC~VCG~--~~----~YtC~~Cg~ryCS~~C~ 182 (195)
...||.+||. || .|.|..||.. |-..|.
T Consensus 219 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~-~Hk~C~ 252 (463)
T 3cxl_A 219 GPHWCEYCANFMWGLIAQGVKCADCGLN-VHKQCS 252 (463)
T ss_dssp SCCBCTTTCCBCCSSSCCEEEETTTCCE-ECHHHH
T ss_pred CCCcchhhhhhhhhHHhcCeeccccCcc-cccccc
Confidence 4469999997 76 5799999884 455554
No 116
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=42.74 E-value=12 Score=26.58 Aligned_cols=23 Identities=30% Similarity=0.687 Sum_probs=15.8
Q ss_pred cccccccCCC-------CceeccCCCCccc
Q 045528 155 RHFCTVCGFS-------ANYTCVKCGMRFC 177 (195)
Q Consensus 155 r~fC~VCG~~-------~~YtC~~Cg~ryC 177 (195)
.+.|+.||.. |...|.+||.-+-
T Consensus 26 ky~C~fCgk~~vkR~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 26 RYDCSFCGKKTVKRGAAGIWTCSCCKKTVA 55 (72)
T ss_dssp CBCCSSCCSSCBSBCSSSCBCCSSSCCCCC
T ss_pred CccCCCCCCceeEecCCCeEECCCCCCEEe
Confidence 4689999864 3446888876553
No 117
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=42.53 E-value=12 Score=21.03 Aligned_cols=23 Identities=26% Similarity=0.478 Sum_probs=18.5
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H~~ 31 (42)
T 2el5_A 9 NPYECSECGKAFNRKDQLISHQR 31 (42)
T ss_dssp CSEECSSSCCEESSHHHHHHHHG
T ss_pred CCccCCCcChhhCCHHHHHHHHH
Confidence 35889999999988888877764
No 118
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.40 E-value=12 Score=21.21 Aligned_cols=24 Identities=29% Similarity=0.517 Sum_probs=18.9
Q ss_pred CceeccCCCCcccChhhhhhhccc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDDT 188 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~Et 188 (195)
..|.|..||..|-...-+..|..+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2emb_A 11 KRYECSKCQATFNLRKHLIQHQKT 34 (44)
T ss_dssp SSEECTTTCCEESCHHHHHHHGGG
T ss_pred CCeECCCCCCccCCHHHHHHHHHH
Confidence 358899999999888888877653
No 119
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=42.35 E-value=9.5 Score=29.63 Aligned_cols=22 Identities=23% Similarity=0.644 Sum_probs=16.3
Q ss_pred CcccccccCC---CC--------ceeccCCCCc
Q 045528 154 RRHFCTVCGF---SA--------NYTCVKCGMR 175 (195)
Q Consensus 154 ~r~fC~VCG~---~~--------~YtC~~Cg~r 175 (195)
.-.||.-||. +. .|.|..||--
T Consensus 23 ~~~FCPeCgNmL~pked~~~~~l~~~CrtCgY~ 55 (133)
T 3qt1_I 23 TFRFCRDCNNMLYPREDKENNRLLFECRTCSYV 55 (133)
T ss_dssp CCCBCTTTCCBCBCCBCTTTCCBCCBCSSSCCB
T ss_pred CCeeCCCCCCEeeECccCCCceeEEECCCCCCc
Confidence 3469999996 32 3899999863
No 120
>3v2d_5 50S ribosomal protein L32; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=42.03 E-value=12 Score=25.45 Aligned_cols=18 Identities=28% Similarity=0.759 Sum_probs=9.1
Q ss_pred ccccccCC--CCceeccCCC
Q 045528 156 HFCTVCGF--SANYTCVKCG 173 (195)
Q Consensus 156 ~fC~VCG~--~~~YtC~~Cg 173 (195)
..|..||. ....-|+.||
T Consensus 31 ~~c~~cGe~~~~H~vc~~CG 50 (60)
T 3v2d_5 31 VPCPECKAMKPPHTVCPECG 50 (60)
T ss_dssp EECTTTCCEECTTSCCTTTC
T ss_pred eECCCCCCeecceEEcCCCC
Confidence 45555554 2233555555
No 121
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=41.69 E-value=8.4 Score=33.76 Aligned_cols=12 Identities=25% Similarity=0.243 Sum_probs=7.2
Q ss_pred hcccccchhhhh
Q 045528 31 RMSTRTRKVAPR 42 (195)
Q Consensus 31 R~S~R~r~~s~r 42 (195)
|...|.+.++..
T Consensus 31 ~RA~Rl~~LA~~ 42 (309)
T 2fiy_A 31 RRGERLLQLAEG 42 (309)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc
Confidence 555666666655
No 122
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=41.23 E-value=14 Score=25.77 Aligned_cols=30 Identities=23% Similarity=0.604 Sum_probs=23.6
Q ss_pred ccccccCC-C----------------CceeccCCCCcccChhhhhhh
Q 045528 156 HFCTVCGF-S----------------ANYTCVKCGMRFCCIRCQNIH 185 (195)
Q Consensus 156 ~fC~VCG~-~----------------~~YtC~~Cg~ryCS~~C~~~H 185 (195)
..|.+||. + -.|.|.-||..|-...-+..|
T Consensus 35 ~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H 81 (96)
T 2ctd_A 35 VSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYH 81 (96)
T ss_dssp EECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHH
T ss_pred cCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHH
Confidence 46888886 3 248899999999888887777
No 123
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=41.08 E-value=22 Score=23.61 Aligned_cols=22 Identities=23% Similarity=0.537 Sum_probs=15.9
Q ss_pred cccccccCC--------CCceeccCCCCcc
Q 045528 155 RHFCTVCGF--------SANYTCVKCGMRF 176 (195)
Q Consensus 155 r~fC~VCG~--------~~~YtC~~Cg~ry 176 (195)
...|..||. .|.+.|..||.-+
T Consensus 11 ~~~Cp~C~~~~lv~D~~~ge~vC~~CGlVl 40 (58)
T 1dl6_A 11 RVTCPNHPDAILVEDYRAGDMICPECGLVV 40 (58)
T ss_dssp CCSBTTBSSSCCEECSSSCCEECTTTCCEE
T ss_pred cccCcCCCCCceeEeCCCCeEEeCCCCCEE
Confidence 347999985 3577899988643
No 124
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.07 E-value=12 Score=21.51 Aligned_cols=23 Identities=26% Similarity=0.453 Sum_probs=18.2
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2enf_A 11 KPYKCNECGKVFTQNSHLVRHRG 33 (46)
T ss_dssp CSCBCSSSCCBCSSHHHHHHHHT
T ss_pred cCeECCCCCcccCCHHHHHHHHH
Confidence 35888889999988888877754
No 125
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=41.02 E-value=9.1 Score=26.20 Aligned_cols=21 Identities=24% Similarity=0.355 Sum_probs=15.2
Q ss_pred ceeccCCCCcccChhhhhhhc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
.|.|..||..|-...=+..|.
T Consensus 69 ~~~C~~C~~~f~~~~~L~~H~ 89 (107)
T 1wjp_A 69 KLTCLECMRTFKSSFSIWRHQ 89 (107)
T ss_dssp GGEEGGGTEECSSHHHHHHHH
T ss_pred CccCccccchhCCHHHHHHHH
Confidence 378888888877776666665
No 126
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.98 E-value=14 Score=20.59 Aligned_cols=24 Identities=25% Similarity=0.577 Sum_probs=19.0
Q ss_pred CceeccCCCCcccChhhhhhhccc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDDT 188 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~Et 188 (195)
..|.|..||..|-...-+..|..+
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H~~~ 32 (41)
T 2ept_A 9 RVYECQECGKSFRQKGSLTLHERI 32 (41)
T ss_dssp CCEECSSSCCEESSHHHHHHHGGG
T ss_pred CCeECCCCCCCcCCHHHHHHHHHH
Confidence 358899999999888888888653
No 127
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=40.83 E-value=15 Score=24.18 Aligned_cols=22 Identities=32% Similarity=0.490 Sum_probs=16.8
Q ss_pred CceeccCCCCcccChhhhhhhc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
..|.|..||..|-...=+..|.
T Consensus 64 ~~~~C~~C~~~f~~~~~L~~H~ 85 (95)
T 2yt9_A 64 KPYICQSCGKGFSRPDHLNGHI 85 (95)
T ss_dssp SSBCCSSSCCCBSSHHHHHHHH
T ss_pred CceECCCccchhCCHHHHHHHH
Confidence 3588888888888777777764
No 128
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=40.66 E-value=8.6 Score=22.88 Aligned_cols=27 Identities=26% Similarity=0.674 Sum_probs=22.3
Q ss_pred CceeccCCCCcccChhhhhhhcccccC
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDDTRCL 191 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~EtRC~ 191 (195)
-.|.|..||..|-...-+..|.-..|.
T Consensus 7 kp~~C~~CgK~F~~~s~L~~H~py~C~ 33 (36)
T 1fv5_A 7 ARFMCLPCGIAFSSPSTLEAHQAYYCS 33 (36)
T ss_dssp CCCEETTTTEECSCHHHHHHHHHHTST
T ss_pred cCeECCCCCCccCCHhHccCcCCeECc
Confidence 368999999999999999999866664
No 129
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=40.45 E-value=11 Score=27.96 Aligned_cols=23 Identities=35% Similarity=0.808 Sum_probs=16.6
Q ss_pred cccccccCCCC-------ceeccCCCCccc
Q 045528 155 RHFCTVCGFSA-------NYTCVKCGMRFC 177 (195)
Q Consensus 155 r~fC~VCG~~~-------~YtC~~Cg~ryC 177 (195)
.++|+.||... ...|.+||.-+-
T Consensus 36 ky~CpfCgk~~vkR~a~GIW~C~~Cg~~~A 65 (92)
T 3iz5_m 36 KYFCEFCGKFAVKRKAVGIWGCKDCGKVKA 65 (92)
T ss_dssp CBCCTTTCSSCBEEEETTEEECSSSCCEEE
T ss_pred cccCcccCCCeeEecCcceEEcCCCCCEEe
Confidence 36999999743 457988877553
No 130
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=40.27 E-value=16 Score=25.19 Aligned_cols=22 Identities=32% Similarity=0.862 Sum_probs=17.1
Q ss_pred CcccccccCC--CC----ceeccCCCCc
Q 045528 154 RRHFCTVCGF--SA----NYTCVKCGMR 175 (195)
Q Consensus 154 ~r~fC~VCG~--~~----~YtC~~Cg~r 175 (195)
...||.+|+. || .|.|..|+..
T Consensus 33 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~ 60 (77)
T 2enn_A 33 QPTFCSVCHEFVWGLNKQGYQCRQCNAA 60 (77)
T ss_dssp SCEECSSSCCEECCTTCCEEECSSSCCE
T ss_pred CCcCccccChhhccccccccCcCCCCCc
Confidence 4469999997 75 5899988753
No 131
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.05 E-value=13 Score=20.21 Aligned_cols=21 Identities=19% Similarity=0.233 Sum_probs=15.7
Q ss_pred ceeccCCCCcccCh-hhhhhhc
Q 045528 166 NYTCVKCGMRFCCI-RCQNIHD 186 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~-~C~~~H~ 186 (195)
.|.|..||..|-.. .-+..|.
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~ 30 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHI 30 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHH
Confidence 57888888888776 6666664
No 132
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.81 E-value=14 Score=20.70 Aligned_cols=24 Identities=29% Similarity=0.585 Sum_probs=18.8
Q ss_pred CceeccCCCCcccChhhhhhhccc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDDT 188 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~Et 188 (195)
..|.|..||..|-...=+..|..+
T Consensus 10 k~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2eos_A 10 KPYPCEICGTRFRHLQTLKSHLRI 33 (42)
T ss_dssp CCBCCSSSCCCBSSHHHHHHHTTT
T ss_pred CCEECCCCCCccCCHHHHHHHHHh
Confidence 358888999999888888877653
No 133
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=39.72 E-value=12 Score=22.21 Aligned_cols=22 Identities=27% Similarity=0.487 Sum_probs=17.3
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|....-+..|..
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~ 28 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYA 28 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHH
T ss_pred CEECCCcCcccCCHHHHHHHhh
Confidence 5888889998888777777754
No 134
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.46 E-value=15 Score=20.94 Aligned_cols=23 Identities=30% Similarity=0.551 Sum_probs=18.4
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yts_A 11 KPYICNECGKSFIQKSHLNRHRR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHGG
T ss_pred cCEECCCCChhhCChHHHHHHHH
Confidence 35889999999988888877754
No 135
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=39.06 E-value=13 Score=27.78 Aligned_cols=21 Identities=19% Similarity=0.675 Sum_probs=15.2
Q ss_pred ccccccCC-----CC------ceeccCCCCcc
Q 045528 156 HFCTVCGF-----SA------NYTCVKCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~-----~~------~YtC~~Cg~ry 176 (195)
.||.-||. .+ .|.|..||--+
T Consensus 5 ~FCp~Cgn~L~~~~~~~~~~~~~~C~~C~y~~ 36 (113)
T 3h0g_I 5 QYCIECNNMLYPREDKVDRVLRLACRNCDYSE 36 (113)
T ss_dssp CCCSSSCCCCEECCCTTTCCCCEECSSSCCEE
T ss_pred eeCcCCCCEeeEcccCCCCeeEEECCCCCCeE
Confidence 59999996 11 48899998643
No 136
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=39.05 E-value=11 Score=23.73 Aligned_cols=13 Identities=31% Similarity=0.608 Sum_probs=10.0
Q ss_pred CceeccCCCCccc
Q 045528 165 ANYTCVKCGMRFC 177 (195)
Q Consensus 165 ~~YtC~~Cg~ryC 177 (195)
..|+|++||..+=
T Consensus 8 ~~~~C~~C~~~i~ 20 (39)
T 2i5o_A 8 DQVPCEKCGSLVP 20 (39)
T ss_dssp CEEECTTTCCEEE
T ss_pred CCcccccccCcCC
Confidence 3679999998754
No 137
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.87 E-value=14 Score=21.27 Aligned_cols=23 Identities=26% Similarity=0.489 Sum_probs=18.2
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eon_A 11 KPYKCQVCGKAFRVSSHLVQHHS 33 (46)
T ss_dssp CSCBCSSSCCBCSSHHHHHHHTT
T ss_pred cccCCCCCCcccCcHHHHHHHHH
Confidence 35888888998888888887764
No 138
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=38.83 E-value=12 Score=27.20 Aligned_cols=22 Identities=27% Similarity=0.905 Sum_probs=18.3
Q ss_pred cccccccCCCCc----eeccCCCCcc
Q 045528 155 RHFCTVCGFSAN----YTCVKCGMRF 176 (195)
Q Consensus 155 r~fC~VCG~~~~----YtC~~Cg~ry 176 (195)
-.+|.|||..|. ..|..|+..|
T Consensus 7 ~~~C~~C~~~g~~~~ll~C~~C~~~~ 32 (111)
T 2ysm_A 7 GANCAVCDSPGDLLDQFFCTTCGQHY 32 (111)
T ss_dssp CSCBTTTCCCCCTTTSEECSSSCCEE
T ss_pred CCCCcCCCCCCCCcCCeECCCCCCCc
Confidence 359999999886 5999998876
No 139
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.72 E-value=13 Score=21.28 Aligned_cols=23 Identities=26% Similarity=0.603 Sum_probs=18.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep1_A 11 KPYECSDCGKSFIKKSQLHVHQR 33 (46)
T ss_dssp CSSCCSSSCCCCSSHHHHHHHHG
T ss_pred CCcCCCCCCchhCCHHHHHHHHH
Confidence 35788889999888888877754
No 140
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=38.61 E-value=14 Score=29.31 Aligned_cols=30 Identities=23% Similarity=0.732 Sum_probs=22.6
Q ss_pred cccccccCCC-----C-ceeccCCCCcccChhhhhhh
Q 045528 155 RHFCTVCGFS-----A-NYTCVKCGMRFCCIRCQNIH 185 (195)
Q Consensus 155 r~fC~VCG~~-----~-~YtC~~Cg~ryCS~~C~~~H 185 (195)
-+.|.+|+-+ + .-.|..|..++|. .|-..+
T Consensus 68 ~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~-~C~~~~ 103 (153)
T 2zet_C 68 ETHCARCLQPYRLLLNSRRQCLECSLFVCK-SCSHAH 103 (153)
T ss_dssp GTBCTTTCCBGGGCSSCCEECTTTCCEECG-GGEECC
T ss_pred CccchhhcCccccccCCCCcCCCCCchhhc-cccccc
Confidence 3599999863 3 3499999999998 776433
No 141
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=38.55 E-value=15 Score=21.81 Aligned_cols=19 Identities=21% Similarity=0.613 Sum_probs=14.1
Q ss_pred cccccCC---CCceeccCCCCc
Q 045528 157 FCTVCGF---SANYTCVKCGMR 175 (195)
Q Consensus 157 fC~VCG~---~~~YtC~~Cg~r 175 (195)
.|..||+ ...-.|.+|+++
T Consensus 8 ~C~~C~~~Nfa~R~~C~~C~~p 29 (33)
T 2k1p_A 8 QCKTCSNVNWARRSECNMCNTP 29 (33)
T ss_dssp BCSSSCCBCCTTCSBCSSSCCB
T ss_pred ccCCCCCccccccccccccCCc
Confidence 7888885 446689888875
No 142
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.43 E-value=13 Score=20.64 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=17.3
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~ 31 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQK 31 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHH
Confidence 5788888988888777777754
No 143
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.88 E-value=14 Score=20.58 Aligned_cols=23 Identities=30% Similarity=0.598 Sum_probs=18.2
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 10 k~~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2en2_A 10 KPYKCETCGARFVQVAHLRAHVL 32 (42)
T ss_dssp CSEECTTTCCEESSHHHHHHHTH
T ss_pred CCEeCCCcChhhCCHHHHHHHHH
Confidence 35889999999988887777754
No 144
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=37.84 E-value=9.6 Score=29.43 Aligned_cols=23 Identities=30% Similarity=0.829 Sum_probs=16.1
Q ss_pred cccccccCCCC-------ceeccCCCCccc
Q 045528 155 RHFCTVCGFSA-------NYTCVKCGMRFC 177 (195)
Q Consensus 155 r~fC~VCG~~~-------~YtC~~Cg~ryC 177 (195)
.++|+.||... ...|..||.-+-
T Consensus 60 kytCPfCGk~~vKR~avGIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 60 DHACPNCGEDRVDRQGTGIWQCSYCDYKFT 89 (116)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEE
T ss_pred CCcCCCCCCceeEecCceeEECCCCCCEEE
Confidence 47999999743 345888877543
No 145
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.82 E-value=14 Score=21.22 Aligned_cols=22 Identities=27% Similarity=0.555 Sum_probs=17.4
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQR 33 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHT
T ss_pred CeECCCCCcccCCHHHHHHHHH
Confidence 5788888998888887777754
No 146
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.73 E-value=16 Score=21.04 Aligned_cols=23 Identities=22% Similarity=0.414 Sum_probs=17.8
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2enh_A 11 KPYECDVCRKAFSHHASLTQHQR 33 (46)
T ss_dssp SSCBCTTTCCBCSSSHHHHHHGG
T ss_pred CCcCCCCcCchhCCHHHHHHHHH
Confidence 35788888988888877777754
No 147
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.58 E-value=12 Score=21.61 Aligned_cols=23 Identities=30% Similarity=0.515 Sum_probs=18.4
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoz_A 11 KPYSCNVCGKAFVLSAHLNQHLR 33 (46)
T ss_dssp CSEEETTTTEEESSHHHHHHHHH
T ss_pred CCeECcccChhhCCHHHHHHHHH
Confidence 35889999999988888877754
No 148
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.30 E-value=15 Score=20.88 Aligned_cols=23 Identities=22% Similarity=0.433 Sum_probs=18.4
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2yu5_A 11 NPFKCSKCDRVFTQRNYLVQHER 33 (44)
T ss_dssp CSEECSSSSCEESSSHHHHHHHH
T ss_pred CCeECCCCCchhCCHHHHHHHhH
Confidence 35889999999988888877754
No 149
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=37.30 E-value=12 Score=25.99 Aligned_cols=21 Identities=5% Similarity=-0.020 Sum_probs=15.5
Q ss_pred ccccccCCC-------CceeccCCCCcc
Q 045528 156 HFCTVCGFS-------ANYTCVKCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~~-------~~YtC~~Cg~ry 176 (195)
-.|.+|+.. +...|+.||..|
T Consensus 11 L~CP~ck~~L~~~~~~g~LvC~~c~~~Y 38 (67)
T 2jny_A 11 LACPKDKGPLRYLESEQLLVNERLNLAY 38 (67)
T ss_dssp CBCTTTCCBCEEETTTTEEEETTTTEEE
T ss_pred hCCCCCCCcCeEeCCCCEEEcCCCCccc
Confidence 368888863 455799998876
No 150
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.50 E-value=14 Score=20.82 Aligned_cols=23 Identities=30% Similarity=0.587 Sum_probs=17.5
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2en7_A 11 KPYVCNECGKAFRSKSYLIIHTR 33 (44)
T ss_dssp SSSCCTTTCCCCSSHHHHHHHHT
T ss_pred cCeECCCCCCccCCHHHHHHHhh
Confidence 35788888888888877777754
No 151
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.44 E-value=16 Score=21.03 Aligned_cols=23 Identities=26% Similarity=0.710 Sum_probs=17.8
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoy_A 11 KCFKCNKCEKTFSCSKYLTQHER 33 (46)
T ss_dssp CCEECSSSCCEESSSHHHHHHHT
T ss_pred CCEECcCCCCcCCCHHHHHHHHH
Confidence 35888889998888777777754
No 152
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=36.32 E-value=16 Score=20.29 Aligned_cols=23 Identities=26% Similarity=0.595 Sum_probs=18.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 10 ~~~~C~~C~k~f~~~~~l~~H~~ 32 (42)
T 2epc_A 10 TPYLCGQCGKSFTQRGSLAVHQR 32 (42)
T ss_dssp CCEECSSSCCEESSHHHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHHhh
Confidence 35889999999888877777754
No 153
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.30 E-value=16 Score=20.87 Aligned_cols=23 Identities=26% Similarity=0.655 Sum_probs=17.8
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...=+..|..
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emi_A 11 RHYECSECGKAFIQKSTLSMHQR 33 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHG
T ss_pred CCCCCCCCCcccCCHHHHHHHHh
Confidence 35888999998888777777754
No 154
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=36.15 E-value=13 Score=26.99 Aligned_cols=23 Identities=43% Similarity=1.103 Sum_probs=16.8
Q ss_pred cccccccCCC-------CceeccCCCCccc
Q 045528 155 RHFCTVCGFS-------ANYTCVKCGMRFC 177 (195)
Q Consensus 155 r~fC~VCG~~-------~~YtC~~Cg~ryC 177 (195)
.+.|+.||.. |...|.+||.-+-
T Consensus 35 ky~CpfCGk~~vkR~a~GIW~C~kCg~~~A 64 (83)
T 3j21_i 35 KHTCPVCGRKAVKRISTGIWQCQKCGATFA 64 (83)
T ss_dssp CBCCSSSCSSCEEEEETTEEEETTTCCEEE
T ss_pred ccCCCCCCCceeEecCcCeEEcCCCCCEEe
Confidence 4789999975 3457888887553
No 155
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.94 E-value=16 Score=20.95 Aligned_cols=23 Identities=30% Similarity=0.654 Sum_probs=18.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yto_A 11 KPYKCSDCGKAFTRKSGLHIHQQ 33 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHH
T ss_pred CCEECcccCCccCCHhHHHHHHH
Confidence 35889999999988877777753
No 156
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=35.90 E-value=14 Score=18.40 Aligned_cols=22 Identities=36% Similarity=0.613 Sum_probs=17.4
Q ss_pred ceecc--CCCCcccChhhhhhhcc
Q 045528 166 NYTCV--KCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~--~Cg~ryCS~~C~~~H~E 187 (195)
.|.|. .||..|-...-+..|..
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHH
Confidence 47888 99999888877777754
No 157
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.80 E-value=16 Score=20.96 Aligned_cols=22 Identities=27% Similarity=0.578 Sum_probs=17.5
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQK 33 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHT
T ss_pred CEECCccCcccCCHHHHHHHHH
Confidence 5788888988888888877754
No 158
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.61 E-value=15 Score=21.08 Aligned_cols=23 Identities=26% Similarity=0.531 Sum_probs=17.8
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq1_A 11 KPYKCNECGKAFRAHSNLTTHQV 33 (46)
T ss_dssp CCCCCTTTTCCCSSHHHHHHHHT
T ss_pred CCeECCcCChhhCCHHHHHHHHH
Confidence 35788888888888877777754
No 159
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=35.60 E-value=19 Score=20.49 Aligned_cols=23 Identities=30% Similarity=0.706 Sum_probs=18.3
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em9_A 11 KPYNCKECGKSFRWASCLLKHQR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHGG
T ss_pred cCeECCccccccCChHHHHHHHH
Confidence 35889999999988888877754
No 160
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.54 E-value=14 Score=21.13 Aligned_cols=23 Identities=26% Similarity=0.481 Sum_probs=17.6
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2yti_A 11 KPYKCNECGKVFTQNSHLARHRG 33 (46)
T ss_dssp CTTCCSSSCCCCSSHHHHHHHHT
T ss_pred cCeECCCCCcccCChhHHHHHhH
Confidence 35788888988888877777754
No 161
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.38 E-value=16 Score=20.50 Aligned_cols=23 Identities=22% Similarity=0.463 Sum_probs=18.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2eof_A 11 KPYECNECQKAFNTKSNLMVHQR 33 (44)
T ss_dssp CSEECTTTCCEESCHHHHHHHHH
T ss_pred CCeECCCCCcccCCHhHHHHHHH
Confidence 35889999999988887777754
No 162
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=35.26 E-value=25 Score=26.26 Aligned_cols=25 Identities=28% Similarity=0.755 Sum_probs=20.6
Q ss_pred cccccccCCCC-ceeccCCCCcccCh
Q 045528 155 RHFCTVCGFSA-NYTCVKCGMRFCCI 179 (195)
Q Consensus 155 r~fC~VCG~~~-~YtC~~Cg~ryCS~ 179 (195)
-..|++|+..+ .+-|..||.-.|+.
T Consensus 24 ~~~C~~C~~~~~~W~CL~CG~vgCgr 49 (109)
T 3c5k_A 24 TQPCGDCGTIQENWVCLSCYQVYCGR 49 (109)
T ss_dssp TCCCTTTCCCSSEEEETTTCCEEECT
T ss_pred CCcCccccCCCCeeeeeecCccccCC
Confidence 35799999854 66999999999964
No 163
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.22 E-value=13 Score=21.07 Aligned_cols=22 Identities=27% Similarity=0.548 Sum_probs=17.5
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQK 33 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHT
T ss_pred CeeCCCCCCccCCHHHHHHHHH
Confidence 5788888988888887777754
No 164
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.81 E-value=20 Score=20.50 Aligned_cols=23 Identities=35% Similarity=0.716 Sum_probs=18.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em7_A 11 KPYKCEECGKGFICRRDLYTHHM 33 (46)
T ss_dssp CSEECSSSCCEESCHHHHHHHGG
T ss_pred cCccCCCccchhCCHHHHHHHHH
Confidence 35889999999888887777754
No 165
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.71 E-value=17 Score=20.75 Aligned_cols=21 Identities=29% Similarity=0.561 Sum_probs=16.6
Q ss_pred ceeccCCCCcccChhhhhhhc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
.|.|..||..|-...-+..|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~ 32 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHL 32 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHH
T ss_pred CeeCcccChhhCCHHHHHHHH
Confidence 588888999888877777664
No 166
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=34.43 E-value=20 Score=20.40 Aligned_cols=23 Identities=22% Similarity=0.493 Sum_probs=18.4
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2el4_A 11 KPYGCSQCAKTFSLKSQLIVHQR 33 (46)
T ss_dssp CSEECSSSSCEESSHHHHHHHGG
T ss_pred CceECCCCCchhCCHHHHHHHHH
Confidence 35889999999988888877764
No 167
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.43 E-value=18 Score=20.61 Aligned_cols=23 Identities=26% Similarity=0.522 Sum_probs=17.9
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yrj_A 11 KPYRCGECGKAFAQKANLTQHQR 33 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHT
T ss_pred CCeECCCCCCccCCHHHHHHHHH
Confidence 35888889998888877777754
No 168
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.40 E-value=16 Score=20.80 Aligned_cols=23 Identities=17% Similarity=0.433 Sum_probs=18.3
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytf_A 11 KPFECSECQKAFNTKSNLIVHQR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH
T ss_pred CCcCCCCCCcccCCHHHHHHHHH
Confidence 35889999999988888877754
No 169
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=34.38 E-value=27 Score=25.11 Aligned_cols=23 Identities=22% Similarity=0.442 Sum_probs=14.9
Q ss_pred CcccccccCC-CCceeccCCCCcc
Q 045528 154 RRHFCTVCGF-SANYTCVKCGMRF 176 (195)
Q Consensus 154 ~r~fC~VCG~-~~~YtC~~Cg~ry 176 (195)
.-.||.-|-. |-..+||-|...+
T Consensus 42 gH~fC~~Ci~~~~~~~CP~Cr~~~ 65 (117)
T 1jm7_B 42 EHIFCSNCVSDCIGTGCPVCYTPA 65 (117)
T ss_dssp SCCBCTTTGGGGTTTBCSSSCCBC
T ss_pred CCHHHHHHHHHHhcCCCcCCCCcC
Confidence 3457877764 3346788887765
No 170
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=33.92 E-value=19 Score=23.71 Aligned_cols=28 Identities=29% Similarity=0.721 Sum_probs=20.0
Q ss_pred ccccccCCC-----Cce-eccCCCCcccChhhhhh
Q 045528 156 HFCTVCGFS-----ANY-TCVKCGMRFCCIRCQNI 184 (195)
Q Consensus 156 ~fC~VCG~~-----~~Y-tC~~Cg~ryCS~~C~~~ 184 (195)
.+|.|||.. +.. -|-.|..-| =..|+..
T Consensus 7 ~~C~vC~~~~~~~~~~ll~Cd~C~~~~-H~~C~~p 40 (66)
T 2yt5_A 7 GVCTICQEEYSEAPNEMVICDKCGQGY-HQLCHTP 40 (66)
T ss_dssp CCBSSSCCCCCBTTBCEEECSSSCCEE-ETTTSSS
T ss_pred CCCCCCCCCCCCCCCCEEECCCCChHH-HhhhCCC
Confidence 589999975 444 899998876 3455553
No 171
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=33.89 E-value=21 Score=25.86 Aligned_cols=26 Identities=19% Similarity=0.553 Sum_probs=17.8
Q ss_pred CCCCcccccccCCC-------------CceeccCCCCcc
Q 045528 151 KTSRRHFCTVCGFS-------------ANYTCVKCGMRF 176 (195)
Q Consensus 151 ~~P~r~fC~VCG~~-------------~~YtC~~Cg~ry 176 (195)
.+|...-|..||.. |...|-.||..|
T Consensus 19 ~L~t~F~CPfCnh~~sV~vkidk~~~~g~l~C~~Cg~~~ 57 (85)
T 1wii_A 19 TLETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEF 57 (85)
T ss_dssp CCSSCCCCTTTCCSSCEEEEEETTTTEEEEEESSSCCEE
T ss_pred CCCCeEcCCCCCCCCeEEEEEEccCCEEEEEcccCCCeE
Confidence 34556678888876 345788888776
No 172
>3r24_B Non-structural protein 10 and non-structural PROT; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus} PDB: 2g9t_A 2ga6_A
Probab=33.78 E-value=11 Score=30.18 Aligned_cols=15 Identities=47% Similarity=1.127 Sum_probs=13.3
Q ss_pred ccccccCCCCceecc
Q 045528 156 HFCTVCGFSANYTCV 170 (195)
Q Consensus 156 ~fC~VCG~~~~YtC~ 170 (195)
..|.|||+|-.|.|.
T Consensus 118 ~vC~VC~~W~~~gC~ 132 (155)
T 3r24_B 118 TVCTVCGMWKGYGCS 132 (155)
T ss_dssp CBCTTTCSBTTTTCC
T ss_pred CcccccccEecCCcc
Confidence 479999999999885
No 173
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.36 E-value=19 Score=20.52 Aligned_cols=23 Identities=26% Similarity=0.657 Sum_probs=18.2
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eml_A 11 KPYECSVCGKAFSHRQSLSVHQR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHG
T ss_pred CCeeCCCcCCccCCHHHHHHHHH
Confidence 35888899999988888777754
No 174
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.30 E-value=18 Score=20.62 Aligned_cols=23 Identities=26% Similarity=0.420 Sum_probs=18.3
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eq0_A 11 KPYKCHECGKVFRRNSHLARHQL 33 (46)
T ss_dssp CCEECTTTCCEESSHHHHHHHHT
T ss_pred CCeECCCCCchhCCHHHHHHHHH
Confidence 35889999999988888877754
No 175
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.28 E-value=19 Score=20.56 Aligned_cols=23 Identities=26% Similarity=0.530 Sum_probs=17.4
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq2_A 11 KPYQCNECGKAFSQTSKLARHQR 33 (46)
T ss_dssp CSSSCCSSCCCCSSHHHHHHHGG
T ss_pred CCeECCCCCcccCCHHHHHHHHH
Confidence 35788888888888777777754
No 176
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=33.23 E-value=18 Score=21.52 Aligned_cols=19 Identities=21% Similarity=0.382 Sum_probs=10.0
Q ss_pred eeccCCCCcccChhhhhhh
Q 045528 167 YTCVKCGMRFCCIRCQNIH 185 (195)
Q Consensus 167 YtC~~Cg~ryCS~~C~~~H 185 (195)
|.|..||..|-...-+..|
T Consensus 33 ~~C~~C~~~f~~~~~l~~H 51 (57)
T 3uk3_C 33 YKCEFCEYAAAQKTSLRYH 51 (57)
T ss_dssp EECSSSSCEESSHHHHHHH
T ss_pred cCCCCCcchhCCHHHHHHH
Confidence 4555555555555444444
No 177
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=33.21 E-value=18 Score=21.73 Aligned_cols=23 Identities=22% Similarity=0.148 Sum_probs=18.0
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 23 k~~~C~~C~k~f~~~~~L~~H~~ 45 (54)
T 1yui_A 23 QPATCPICYAVIRQSRNLRRHLE 45 (54)
T ss_dssp CCEECTTTCCEESSHHHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHH
Confidence 45888889998888777777754
No 178
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=33.16 E-value=21 Score=25.25 Aligned_cols=28 Identities=29% Similarity=0.641 Sum_probs=13.0
Q ss_pred cccccCC--CCceeccCCCCcccChhhhhhh
Q 045528 157 FCTVCGF--SANYTCVKCGMRFCCIRCQNIH 185 (195)
Q Consensus 157 fC~VCG~--~~~YtC~~Cg~ryCS~~C~~~H 185 (195)
.|.||.. ...++...||-.|| ..|...+
T Consensus 17 ~C~IC~~~~~~p~~~~~CgH~fC-~~Ci~~~ 46 (108)
T 2ckl_A 17 MCVLCGGYFIDATTIIECLHSFC-KTCIVRY 46 (108)
T ss_dssp BCTTTSSBCSSEEEETTTCCEEE-HHHHHHH
T ss_pred CCccCChHHhCcCEeCCCCChhh-HHHHHHH
Confidence 4555553 22334345555555 3444433
No 179
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.12 E-value=19 Score=20.53 Aligned_cols=23 Identities=26% Similarity=0.525 Sum_probs=18.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep3_A 11 KPYRCAECGKAFTDRSNLFTHQK 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHT
T ss_pred CCeECCCCCchhCCHHHHHHHHH
Confidence 35889999999888887777754
No 180
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.03 E-value=19 Score=20.41 Aligned_cols=22 Identities=23% Similarity=0.428 Sum_probs=17.1
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~ 31 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTL 31 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHH
T ss_pred CEECCCCCCeeCChHHHHHHHH
Confidence 5788888998888777777753
No 181
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=32.98 E-value=19 Score=23.79 Aligned_cols=21 Identities=29% Similarity=0.816 Sum_probs=16.1
Q ss_pred ccccccCCCCce-eccCCCCcc
Q 045528 156 HFCTVCGFSANY-TCVKCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~~~~Y-tC~~Cg~ry 176 (195)
.+|.|||..+.. -|-.|..-|
T Consensus 10 ~~C~vC~~~g~ll~Cd~C~~~f 31 (61)
T 1mm2_A 10 EFCRVCKDGGELLCCDTCPSSY 31 (61)
T ss_dssp SSCTTTCCCSSCBCCSSSCCCB
T ss_pred CcCCCCCCCCCEEEcCCCCHHH
Confidence 489999987765 888876654
No 182
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=32.80 E-value=17 Score=27.61 Aligned_cols=21 Identities=33% Similarity=0.806 Sum_probs=15.9
Q ss_pred cccccCC-C----C-ceeccCCCCccc
Q 045528 157 FCTVCGF-S----A-NYTCVKCGMRFC 177 (195)
Q Consensus 157 fC~VCG~-~----~-~YtC~~Cg~ryC 177 (195)
-|--||| + + .-.||.|+....
T Consensus 69 ~C~~CG~~F~~~~~kPsrCP~CkSe~I 95 (105)
T 2gmg_A 69 QCRKCGFVFKAEINIPSRCPKCKSEWI 95 (105)
T ss_dssp BBTTTCCBCCCCSSCCSSCSSSCCCCB
T ss_pred ChhhCcCeecccCCCCCCCcCCCCCcc
Confidence 5999998 6 2 359999987543
No 183
>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A
Probab=32.71 E-value=19 Score=28.10 Aligned_cols=32 Identities=19% Similarity=0.444 Sum_probs=25.5
Q ss_pred cccccccCCCC-ceeccCCCCcccChhhhhhhcc
Q 045528 155 RHFCTVCGFSA-NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 155 r~fC~VCG~~~-~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-..|.-||..+ .+.++.-|...| +.|-.+|+.
T Consensus 25 N~~CaDCg~~~P~WaS~n~GvfiC-~~CsgiHR~ 57 (140)
T 2olm_A 25 NRKCFDCDQRGPTYVNMTVGSFVC-TSCSGSLRG 57 (140)
T ss_dssp GGSCTTTCSSCCCEEETTTTEEEC-HHHHHHHTT
T ss_pred CCcCCCCCCCCCCceeeccCEEEc-hhccchhcc
Confidence 35899999854 678888888875 789999986
No 184
>2fyg_A Replicase polyprotein 1AB; SARS virus polyprotein non-structural protein NSP10, zinc FI viral protein; 1.80A {Sars coronavirus} SCOP: g.86.1.1 PDB: 2xyq_B* 2xyr_B* 2xyv_B*
Probab=32.65 E-value=14 Score=28.75 Aligned_cols=15 Identities=47% Similarity=1.127 Sum_probs=13.3
Q ss_pred ccccccCCCCceecc
Q 045528 156 HFCTVCGFSANYTCV 170 (195)
Q Consensus 156 ~fC~VCG~~~~YtC~ 170 (195)
..|.|||+|=.|-|.
T Consensus 111 ~vC~VC~~W~~~gC~ 125 (128)
T 2fyg_A 111 TVCTVCGMWKGYGCS 125 (128)
T ss_dssp CBCTTTCSBTTBBCC
T ss_pred CccceeceeecCCcc
Confidence 479999999999885
No 185
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=32.50 E-value=20 Score=20.54 Aligned_cols=23 Identities=22% Similarity=0.457 Sum_probs=18.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2el6_A 11 NPYKCSQCEKSFSGKLRLLVHQR 33 (46)
T ss_dssp CSEECSSSSCEESSHHHHHHHHG
T ss_pred CCeECCCCCcccCCHHHHHHHHH
Confidence 35889999999988887777754
No 186
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.45 E-value=22 Score=20.30 Aligned_cols=23 Identities=26% Similarity=0.481 Sum_probs=17.8
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2ytn_A 11 KPYKCNECGKVFTQNSHLARHRG 33 (46)
T ss_dssp SSCBCTTTCCBCSSHHHHHHHGG
T ss_pred cCeECCCCCCeeCCHHHHHHHhh
Confidence 35788888988888877777754
No 187
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=32.43 E-value=20 Score=20.58 Aligned_cols=23 Identities=22% Similarity=0.561 Sum_probs=17.5
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emj_A 11 KPFECAECGKSFSISSQLATHQR 33 (46)
T ss_dssp CSEECSSSSCEESSHHHHHHHHH
T ss_pred CCEECCCCCcccCCHHHHHHHHH
Confidence 35888889998888777776653
No 188
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.41 E-value=16 Score=20.88 Aligned_cols=23 Identities=22% Similarity=0.507 Sum_probs=18.0
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (45)
T 2epu_A 11 KPFECTHCGKSFRAKGNLVTHQR 33 (45)
T ss_dssp CSEEETTTTEEESSHHHHHHHHT
T ss_pred cCccCCCCCCccCChHHHHHHHH
Confidence 35888889998888887777754
No 189
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.35 E-value=20 Score=20.52 Aligned_cols=23 Identities=26% Similarity=0.628 Sum_probs=17.8
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2ytp_A 11 RHYECSECGKAFARKSTLIMHQR 33 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHT
T ss_pred CCeECCcCCcccCCHHHHHHHHH
Confidence 35888889998888777777754
No 190
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.35 E-value=20 Score=23.19 Aligned_cols=28 Identities=29% Similarity=0.827 Sum_probs=19.3
Q ss_pred cccccccCCCCce-eccCCCCcccChhhhh
Q 045528 155 RHFCTVCGFSANY-TCVKCGMRFCCIRCQN 183 (195)
Q Consensus 155 r~fC~VCG~~~~Y-tC~~Cg~ryCS~~C~~ 183 (195)
-.+|.|||..+.. .|-.|..-|= +.|+.
T Consensus 9 ~~~C~vC~~~g~ll~Cd~C~~~~H-~~Cl~ 37 (56)
T 2yql_A 9 EDFCSVCRKSGQLLMCDTCSRVYH-LDCLD 37 (56)
T ss_dssp CCSCSSSCCSSCCEECSSSSCEEC-SSSSS
T ss_pred CCCCccCCCCCeEEEcCCCCcceE-CccCC
Confidence 3589999988765 8888875542 34444
No 191
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.20 E-value=20 Score=20.50 Aligned_cols=23 Identities=26% Similarity=0.573 Sum_probs=17.5
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em4_A 11 RPYECIECGKAFKTKSSLICHRR 33 (46)
T ss_dssp SSEECSSSCCEESSHHHHHHHHH
T ss_pred cCcCCCCCCCccCCHHHHHHHHH
Confidence 35888889998888777777653
No 192
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=32.19 E-value=20 Score=23.96 Aligned_cols=27 Identities=26% Similarity=0.656 Sum_probs=19.3
Q ss_pred ccccccCCCCce-eccCCCCcccChhhhh
Q 045528 156 HFCTVCGFSANY-TCVKCGMRFCCIRCQN 183 (195)
Q Consensus 156 ~fC~VCG~~~~Y-tC~~Cg~ryCS~~C~~ 183 (195)
-+|.|||..+.. -|-.|..-| =+.|+.
T Consensus 9 ~~C~vC~~~g~ll~CD~C~~~f-H~~Cl~ 36 (66)
T 1xwh_A 9 DECAVCRDGGELICCDGCPRAF-HLACLS 36 (66)
T ss_dssp CSBSSSSCCSSCEECSSCCCEE-CTTTSS
T ss_pred CCCccCCCCCCEEEcCCCChhh-cccccC
Confidence 489999987765 888887655 234554
No 193
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.15 E-value=20 Score=20.38 Aligned_cols=23 Identities=30% Similarity=0.648 Sum_probs=17.6
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eow_A 11 KPYKCNECGKAFRARSSLAIHQA 33 (46)
T ss_dssp CCEECTTSCCEESSHHHHHHHHH
T ss_pred CCeeccccCChhcCHHHHHHHHH
Confidence 35888889998888777777643
No 194
>3alr_A Nanos protein; zinc-finger, translational repression, RNA, 3'-UTR, metal BI protein; 2.10A {Danio rerio}
Probab=32.00 E-value=23 Score=27.01 Aligned_cols=24 Identities=33% Similarity=0.807 Sum_probs=16.9
Q ss_pred cccccccCCCCceeccCCCC--------cccChhh
Q 045528 155 RHFCTVCGFSANYTCVKCGM--------RFCCIRC 181 (195)
Q Consensus 155 r~fC~VCG~~~~YtC~~Cg~--------ryCS~~C 181 (195)
+..|.| .-.|+|+-||+ +||.+.=
T Consensus 63 ~V~CPv---LR~Y~CpiCGATGd~AHT~kYCP~~~ 94 (106)
T 3alr_A 63 DVMCPY---LRQYKCPLCGATGAKAHTKRFCPMVD 94 (106)
T ss_dssp CBCCTT---GGGCCCTTTCCCGGGCCCGGGCTTCG
T ss_pred CCcCCC---cccccCCCCCCcCCcccceecCCCCC
Confidence 445555 66799999987 7887653
No 195
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.95 E-value=23 Score=20.23 Aligned_cols=23 Identities=22% Similarity=0.657 Sum_probs=18.2
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emf_A 11 KHFECTECGKAFTRKSTLSMHQK 33 (46)
T ss_dssp CCEECSSSCCEESCHHHHHHHGG
T ss_pred CCeECCCCCchhCCHHHHHHHHH
Confidence 35889999999888877777754
No 196
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.90 E-value=22 Score=20.22 Aligned_cols=23 Identities=17% Similarity=0.416 Sum_probs=17.9
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytg_A 11 KPFKCGECGKSYNQRVHLTQHQR 33 (46)
T ss_dssp CSEECTTTCCEESSSHHHHTTGG
T ss_pred CCeECCCCCcccCCHHHHHHHHH
Confidence 35888889998888777777754
No 197
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=31.75 E-value=21 Score=20.36 Aligned_cols=23 Identities=26% Similarity=0.541 Sum_probs=18.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ema_A 11 KRYKCNECGKVFSRNSQLSQHQK 33 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHT
T ss_pred cCcCCCCCcchhCCHHHHHHHHH
Confidence 45889999999888887777754
No 198
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.73 E-value=21 Score=20.31 Aligned_cols=23 Identities=26% Similarity=0.647 Sum_probs=17.9
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2epw_A 11 KPCKCTECGKAFCWKSQLIMHQR 33 (46)
T ss_dssp CSEECSSSCCEESSSHHHHHHHH
T ss_pred CCeeCCCCCCccCCHHHHHHHHH
Confidence 35889999999888877777753
No 199
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.70 E-value=22 Score=20.23 Aligned_cols=23 Identities=26% Similarity=0.401 Sum_probs=18.2
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eme_A 11 KPYVCDYCGKAFGLSAELVRHQR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHG
T ss_pred CCeECCCCChhhCCHHHHHHHHH
Confidence 35889999999988887777754
No 200
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.55 E-value=21 Score=20.42 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=17.7
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em2_A 11 KPFKCKECGKAFRQNIHLASHLR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH
T ss_pred CCEECCcCCchhCCHHHHHHHHH
Confidence 35888889998888777777743
No 201
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.53 E-value=20 Score=20.37 Aligned_cols=23 Identities=22% Similarity=0.433 Sum_probs=17.6
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eop_A 11 KPHECRECGKSFSFNSQLIVHQR 33 (46)
T ss_dssp CSCBCTTTCCBCSSHHHHHHHHT
T ss_pred CCeeCCCCCchhCCHHHHHHHHH
Confidence 35788888888888877777754
No 202
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.48 E-value=21 Score=20.32 Aligned_cols=23 Identities=39% Similarity=0.857 Sum_probs=17.9
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2en8_A 11 KSHTCDECGKNFCYISALRIHQR 33 (46)
T ss_dssp SSEECTTTCCEESSHHHHHHHHT
T ss_pred CCeECCCcCcccCCHHHHHHHHH
Confidence 35888889999888877777754
No 203
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.46 E-value=17 Score=20.61 Aligned_cols=23 Identities=30% Similarity=0.625 Sum_probs=17.5
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~ 33 (44)
T 2eox_A 11 KSYNCNECGKAFTRIFHLTRHQK 33 (44)
T ss_dssp CCEEETTTTEEESSSHHHHTTHH
T ss_pred CCeECcccCcccCCHHHHHHHHH
Confidence 35788888988888777777754
No 204
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=31.42 E-value=22 Score=18.37 Aligned_cols=23 Identities=22% Similarity=0.387 Sum_probs=17.3
Q ss_pred ceecc--CCCCcccChhhhhhhccc
Q 045528 166 NYTCV--KCGMRFCCIRCQNIHDDT 188 (195)
Q Consensus 166 ~YtC~--~Cg~ryCS~~C~~~H~Et 188 (195)
.|.|. .||..|-...-+..|..+
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH
Confidence 47787 889888887777777643
No 205
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.35 E-value=24 Score=20.18 Aligned_cols=23 Identities=22% Similarity=0.534 Sum_probs=17.4
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2elz_A 11 KPYKCEDCGKGYNRRLNLDMHQR 33 (46)
T ss_dssp SSCBCSSSCCBCSSHHHHHHHGG
T ss_pred CCeeCcccCchhCCHHHHHHHHH
Confidence 35788888888888777777754
No 206
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.04 E-value=21 Score=20.47 Aligned_cols=23 Identities=17% Similarity=0.463 Sum_probs=17.2
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2en9_A 11 KLFKCNECKKTFTQSSSLTVHQR 33 (46)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHH
T ss_pred CCEECCccCcccCCHHHHHHHHH
Confidence 35788888888888777777653
No 207
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.00 E-value=16 Score=20.83 Aligned_cols=23 Identities=26% Similarity=0.621 Sum_probs=17.7
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq3_A 11 KPYECNQCGKAFSVRSSLTTHQA 33 (46)
T ss_dssp CSSEETTTTEECSSHHHHHHHHT
T ss_pred CCeECCCCChhhCCHHHHHHHHH
Confidence 35788888988888777777754
No 208
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=30.96 E-value=15 Score=29.14 Aligned_cols=19 Identities=32% Similarity=1.160 Sum_probs=9.8
Q ss_pred ccccccCCC----CceeccCCCC
Q 045528 156 HFCTVCGFS----ANYTCVKCGM 174 (195)
Q Consensus 156 ~fC~VCG~~----~~YtC~~Cg~ 174 (195)
.||.+|-+| ..|-|..||+
T Consensus 84 Y~C~~C~l~d~~k~~yHC~~Cgi 106 (143)
T 2dkt_A 84 YYCSICHLFDKDKRQYHCESCGI 106 (143)
T ss_dssp EECSSSCCEECSSSEEEETTTTE
T ss_pred eEeceeecccCCCceecCCCCCc
Confidence 355555554 2445555554
No 209
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.86 E-value=20 Score=20.58 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=16.8
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRR 33 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHH
T ss_pred CcCCCCCCCeeCChHHHHHHHH
Confidence 5788888888888777777643
No 210
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.57 E-value=22 Score=20.20 Aligned_cols=23 Identities=26% Similarity=0.510 Sum_probs=17.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eor_A 11 KPYNCEECGKAFIHDSQLQEHQR 33 (46)
T ss_dssp CSEECTTTCCEESSHHHHHHHHH
T ss_pred cCccCCCCCCCcCCHHHHHHHHH
Confidence 35888888988888777776643
No 211
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.54 E-value=23 Score=20.21 Aligned_cols=23 Identities=26% Similarity=0.533 Sum_probs=18.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytj_A 11 KPYICAECGKAFTIRSNLIKHQK 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH
T ss_pred cCeECCCCChhhCCHHHHHHHHH
Confidence 35889999999988887777753
No 212
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.51 E-value=23 Score=20.21 Aligned_cols=23 Identities=22% Similarity=0.408 Sum_probs=17.6
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2em3_A 11 KPYECKVCSKAFTQKAHLAQHQK 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHHHHH
Confidence 35888889998888777777653
No 213
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=30.46 E-value=17 Score=26.21 Aligned_cols=23 Identities=30% Similarity=0.829 Sum_probs=16.5
Q ss_pred cccccccCCCC-------ceeccCCCCccc
Q 045528 155 RHFCTVCGFSA-------NYTCVKCGMRFC 177 (195)
Q Consensus 155 r~fC~VCG~~~-------~YtC~~Cg~ryC 177 (195)
.+.|+.||... ...|..||.-+.
T Consensus 27 ~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 27 DHACPNCGEDRVDRQGTGIWQCSYCDYKFT 56 (83)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEE
T ss_pred cCcCCCCCCcceeccCCCeEECCCCCCEec
Confidence 46899999732 356999987654
No 214
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=30.38 E-value=34 Score=26.32 Aligned_cols=26 Identities=19% Similarity=0.418 Sum_probs=20.9
Q ss_pred cccccccCCCC-ceeccCCCCcccChh
Q 045528 155 RHFCTVCGFSA-NYTCVKCGMRFCCIR 180 (195)
Q Consensus 155 r~fC~VCG~~~-~YtC~~Cg~ryCS~~ 180 (195)
-..|++|+..+ .+-|..||.-.|+..
T Consensus 34 ~~~C~~C~~~~~LwlCL~CG~vgCgr~ 60 (129)
T 2g45_A 34 GWKCSKCDMRENLWLNLTDGSILCGRR 60 (129)
T ss_dssp BCCCSSSSCCSSEEEETTTCCEEECCB
T ss_pred CCcCccccCcCceEEeccCCccccCcc
Confidence 34799999865 569999999888654
No 215
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.28 E-value=23 Score=20.18 Aligned_cols=23 Identities=26% Similarity=0.592 Sum_probs=18.3
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep2_A 11 KPYECSICGKSFTKKSQLHVHQQ 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH
T ss_pred cCcCCCCCCcccCCHHHHHHHHH
Confidence 35889999999988888877754
No 216
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=30.27 E-value=24 Score=20.17 Aligned_cols=22 Identities=32% Similarity=0.774 Sum_probs=16.6
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHK 33 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHH
T ss_pred CcccCccCcccCCHHHHHHHHH
Confidence 5788888888888777777653
No 217
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=30.27 E-value=24 Score=22.89 Aligned_cols=22 Identities=27% Similarity=0.351 Sum_probs=17.9
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|.-||..|-...-+..|.-
T Consensus 32 p~~C~~C~k~F~~~~~L~~H~~ 53 (60)
T 4gzn_C 32 PRSCPECGKCFRDQSEVNRHLK 53 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHGG
T ss_pred CeECCCCCCCcCCHHHHHHHhC
Confidence 4889999999888888887764
No 218
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.80 E-value=24 Score=20.04 Aligned_cols=23 Identities=22% Similarity=0.342 Sum_probs=17.6
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2emm_A 11 RPHKCNECGKSFIQSAHLIQHQR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH
T ss_pred CCeeCCCCChhhCCHHHHHHHHH
Confidence 35888899998888777777643
No 219
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.68 E-value=24 Score=20.18 Aligned_cols=23 Identities=26% Similarity=0.564 Sum_probs=17.5
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em8_A 11 KPYKCVECGKGYKRRLDLDFHQR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH
T ss_pred CCeECcccCchhCCHHHHHHHHH
Confidence 35888889998888777776643
No 220
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.57 E-value=24 Score=20.17 Aligned_cols=23 Identities=26% Similarity=0.395 Sum_probs=18.1
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eoo_A 11 RPYGCNECGKNFGRHSHLIEHLK 33 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHH
T ss_pred CCEEccccCcccCCHHHHHHHHH
Confidence 35889999999988887777753
No 221
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.43 E-value=23 Score=20.22 Aligned_cols=22 Identities=32% Similarity=0.611 Sum_probs=17.0
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...=+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMR 33 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHT
T ss_pred CcCCCccChhhCChHHHHHHHH
Confidence 4788888888888777777754
No 222
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.42 E-value=24 Score=20.07 Aligned_cols=23 Identities=26% Similarity=0.512 Sum_probs=17.8
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ene_A 11 KPYKCNECGKVFRHNSYLSRHQR 33 (46)
T ss_dssp SSEECSSSCCEESSHHHHHHHHT
T ss_pred CCeECCCCCchhCChHHHHHHHh
Confidence 35888889998888777777754
No 223
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=29.42 E-value=23 Score=23.50 Aligned_cols=21 Identities=29% Similarity=0.885 Sum_probs=16.1
Q ss_pred ccccccCCC-----Cceecc--CCCCcc
Q 045528 156 HFCTVCGFS-----ANYTCV--KCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~~-----~~YtC~--~Cg~ry 176 (195)
-.|.+|+.. +...|. .||..|
T Consensus 11 L~CP~c~~~L~~~~~~L~C~~~~c~~~Y 38 (56)
T 2kpi_A 11 LACPACHAPLEERDAELICTGQDCGLAY 38 (56)
T ss_dssp CCCSSSCSCEEEETTEEEECSSSCCCEE
T ss_pred eeCCCCCCcceecCCEEEcCCcCCCcEE
Confidence 378888875 666888 888776
No 224
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=29.40 E-value=23 Score=24.09 Aligned_cols=20 Identities=20% Similarity=0.477 Sum_probs=13.9
Q ss_pred eec--cCCCCcccChhhhhhhc
Q 045528 167 YTC--VKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 167 YtC--~~Cg~ryCS~~C~~~H~ 186 (195)
|.| +.||..|-+..-+..|.
T Consensus 95 ~~C~~~~C~~~f~~~~~L~~H~ 116 (119)
T 2jp9_A 95 FSCRWPSCQKKFARSDELVRHH 116 (119)
T ss_dssp EECCSTTCCCEESSHHHHHHHH
T ss_pred eeCCCCCCccccCCHHHHHHHH
Confidence 777 67777777766666664
No 225
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=29.22 E-value=26 Score=19.95 Aligned_cols=23 Identities=22% Similarity=0.625 Sum_probs=17.5
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2em0_A 11 KTWKCRECDMCFSQASSLRLHQN 33 (46)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHGG
T ss_pred cCeECCCCCcccCCHHHHHHHHH
Confidence 35788888888888777777754
No 226
>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens}
Probab=29.12 E-value=22 Score=27.52 Aligned_cols=33 Identities=30% Similarity=0.779 Sum_probs=26.1
Q ss_pred CcccccccCCCC-ceeccCCCCcccChhhhhhhcc
Q 045528 154 RRHFCTVCGFSA-NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 154 ~r~fC~VCG~~~-~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.-..|.-||..+ .|.++.-|...| +.|-.+|+.
T Consensus 26 ~N~~CaDCg~~~P~WaS~n~GvfiC-~~CsgiHR~ 59 (134)
T 2iqj_A 26 DNKFCADCQSKGPRWASWNIGVFIC-IRCAGIHRN 59 (134)
T ss_dssp GGGBCTTTCCBSCCEEETTTTEEEC-HHHHHHHHH
T ss_pred CCCcCCcCcCCCCCeEEecCCEEEh-HhhhHHHhc
Confidence 346899999855 678888888875 789999986
No 227
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=29.04 E-value=24 Score=26.63 Aligned_cols=24 Identities=33% Similarity=0.844 Sum_probs=17.9
Q ss_pred ccccccCC-CC----ceeccCCCCcccCh
Q 045528 156 HFCTVCGF-SA----NYTCVKCGMRFCCI 179 (195)
Q Consensus 156 ~fC~VCG~-~~----~YtC~~Cg~ryCS~ 179 (195)
..|.+|+. ++ +.-|-.||.-||+.
T Consensus 70 ~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~ 98 (125)
T 1joc_A 70 QNCMACGKGFSVTVRRHHCRQCGNIFCAE 98 (125)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGG
T ss_pred CCCcCcCCccccccccccCCCCCeEEChH
Confidence 47888886 33 45899999988873
No 228
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.99 E-value=23 Score=20.26 Aligned_cols=22 Identities=32% Similarity=0.582 Sum_probs=16.3
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKR 33 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHH
T ss_pred CcCCCCcCchhCCHHHHHHHHH
Confidence 5788888888877777766643
No 229
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.83 E-value=25 Score=20.00 Aligned_cols=23 Identities=22% Similarity=0.440 Sum_probs=18.3
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-.|.|..||..|-...=+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep0_A 11 KPYKCDVCHKSFRYGSSLTVHQR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHT
T ss_pred CCeeCcccCcccCChHHHHHHHH
Confidence 35889999999988888877754
No 230
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=28.69 E-value=23 Score=22.92 Aligned_cols=20 Identities=25% Similarity=0.760 Sum_probs=16.3
Q ss_pred ccccccCC--CCceeccCCCCc
Q 045528 156 HFCTVCGF--SANYTCVKCGMR 175 (195)
Q Consensus 156 ~fC~VCG~--~~~YtC~~Cg~r 175 (195)
.+|.+||. |..|+|.-|+..
T Consensus 15 t~C~~C~k~i~~G~kC~~Ck~~ 36 (49)
T 1kbe_A 15 QVCNVCQKSMIFGVKCKHCRLK 36 (49)
T ss_dssp CCCSSSCCSSCCEEEETTTTEE
T ss_pred cCccccCceeECcCCCCCCCCc
Confidence 69999996 777999888754
No 231
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=28.66 E-value=27 Score=21.88 Aligned_cols=25 Identities=28% Similarity=0.660 Sum_probs=17.6
Q ss_pred cccccCCCC----ceeccCCCCcccChhhh
Q 045528 157 FCTVCGFSA----NYTCVKCGMRFCCIRCQ 182 (195)
Q Consensus 157 fC~VCG~~~----~YtC~~Cg~ryCS~~C~ 182 (195)
+|.|||..+ -.-|-.|...| =+.|+
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~-H~~Cl 30 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAF-HLFCL 30 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEE-CHHHH
T ss_pred CCCCCCCCCCCCCEEECCCCChhh-CcccC
Confidence 699999766 34888887654 45555
No 232
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=28.58 E-value=26 Score=22.76 Aligned_cols=9 Identities=44% Similarity=1.110 Sum_probs=6.0
Q ss_pred eeccCCCCc
Q 045528 167 YTCVKCGMR 175 (195)
Q Consensus 167 YtC~~Cg~r 175 (195)
|.|..||-+
T Consensus 38 y~C~~Cg~~ 46 (50)
T 1tfi_A 38 VVCNECGNR 46 (50)
T ss_dssp EEESSSCCE
T ss_pred EEcCCCCCe
Confidence 677777754
No 233
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=28.57 E-value=27 Score=24.74 Aligned_cols=24 Identities=29% Similarity=0.769 Sum_probs=20.0
Q ss_pred ccccc--cCCCC--ceeccCCCCcccCh
Q 045528 156 HFCTV--CGFSA--NYTCVKCGMRFCCI 179 (195)
Q Consensus 156 ~fC~V--CG~~~--~YtC~~Cg~ryCS~ 179 (195)
.-|++ |+..+ .+.|..||.-||..
T Consensus 15 ~~Cs~~~C~~~dflpf~C~~C~~~FC~~ 42 (75)
T 1wys_A 15 QHCQVQHCRQRDFLPFVCDGCSGIFCLE 42 (75)
T ss_dssp CCCSCTTTCCCSCCCEECTTTCCEECST
T ss_pred CCcCcccCCCccceeeECcccCcCcCcc
Confidence 46988 98755 67999999999984
No 234
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.48 E-value=23 Score=20.04 Aligned_cols=22 Identities=23% Similarity=0.357 Sum_probs=16.2
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQA 33 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHH
Confidence 5788888888877777766643
No 235
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=28.44 E-value=40 Score=24.28 Aligned_cols=27 Identities=22% Similarity=0.545 Sum_probs=21.1
Q ss_pred CCcccccc--cCC--CCceeccCCCCcccCh
Q 045528 153 SRRHFCTV--CGF--SANYTCVKCGMRFCCI 179 (195)
Q Consensus 153 P~r~fC~V--CG~--~~~YtC~~Cg~ryCS~ 179 (195)
....-|++ |+. +-.+.|..||..||..
T Consensus 23 ~~~~~C~~~~Ck~~~~l~f~C~~C~~~FC~~ 53 (86)
T 1wfe_A 23 HKSYSCSFKGCTDVELVAVICPYCEKNFCLR 53 (86)
T ss_dssp SCCEECCSTTCCCEESSCEECTTTCCEECGG
T ss_pred CCCCCCCCcCCCCCCccceECCCCCcccccc
Confidence 33457999 996 4467999999999974
No 236
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.39 E-value=25 Score=19.91 Aligned_cols=22 Identities=32% Similarity=0.691 Sum_probs=16.7
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...=+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQK 33 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHH
T ss_pred CccCCccChhhCCHHHHHHHHH
Confidence 5788888888888777776643
No 237
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.37 E-value=27 Score=21.74 Aligned_cols=28 Identities=18% Similarity=0.278 Sum_probs=22.4
Q ss_pred ceecc-CCCCcccChhhhhhhcccccCcc
Q 045528 166 NYTCV-KCGMRFCCIRCQNIHDDTRCLKF 193 (195)
Q Consensus 166 ~YtC~-~Cg~ryCS~~C~~~H~EtRC~K~ 193 (195)
.|.|. .||..|-...-+..|..+-|.+.
T Consensus 36 p~~C~~~C~k~f~~~~~L~~H~~~hc~~~ 64 (66)
T 2eod_A 36 PVACPNQCGVGTVAREDLPGHLKDSCNTA 64 (66)
T ss_dssp EEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred CccCCcccCcccccHHHHHHHHHhhcccC
Confidence 57898 89998888888888887777553
No 238
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=28.31 E-value=24 Score=21.62 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=16.2
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-+..-+..|..
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~ 31 (66)
T 2drp_A 10 TYRCKVCSRVYTHISNFCRHYV 31 (66)
T ss_dssp EEECTTTCCEESSHHHHHHHHH
T ss_pred ceECCCCcchhCCHHHHHHHHH
Confidence 5788888888877777766643
No 239
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.24 E-value=20 Score=20.41 Aligned_cols=23 Identities=26% Similarity=0.608 Sum_probs=18.0
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ysp_A 11 KPYKCEKCGKGYNSKFNLDMHQK 33 (46)
T ss_dssp CSEEETTTTEEESCHHHHHHHHT
T ss_pred CCeECCCCCCccCCHHHHHHHHH
Confidence 35888899998888877777754
No 240
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=28.10 E-value=23 Score=26.62 Aligned_cols=21 Identities=24% Similarity=0.621 Sum_probs=16.1
Q ss_pred ccccccCC--C---------CceeccCCCCcc
Q 045528 156 HFCTVCGF--S---------ANYTCVKCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~--~---------~~YtC~~Cg~ry 176 (195)
.||..||. . ..|.|..||-.+
T Consensus 5 ~FCp~CgnlL~~~~~~~~~~~~~~C~~C~y~~ 36 (122)
T 1twf_I 5 RFCRDCNNMLYPREDKENNRLLFECRTCSYVE 36 (122)
T ss_dssp CBCSSSCCBCEEEEETTTTEEEEECSSSSCEE
T ss_pred CcccccCccCcccccCcCCCCEEECCcCCCee
Confidence 59999996 2 247999998754
No 241
>2han_A Protein ultraspiracle; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2
Probab=28.04 E-value=7.8 Score=28.31 Aligned_cols=20 Identities=35% Similarity=1.024 Sum_probs=14.0
Q ss_pred cccccccCC------CCceeccCCCC
Q 045528 155 RHFCTVCGF------SANYTCVKCGM 174 (195)
Q Consensus 155 r~fC~VCG~------~~~YtC~~Cg~ 174 (195)
...|.|||. +|.++|-.|-.
T Consensus 10 ~~~C~VCgd~a~g~hyGv~sC~aCk~ 35 (93)
T 2han_A 10 KHLCSICGDRASGKHYGVYSCEGCKG 35 (93)
T ss_dssp CCBCTTTCSBCCEEETTEEECHHHHH
T ss_pred CCCCcEeCCCCcCeecCcchhHHHHH
Confidence 358999996 44557777744
No 242
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=27.98 E-value=24 Score=25.62 Aligned_cols=21 Identities=29% Similarity=0.841 Sum_probs=16.3
Q ss_pred ccccccCCCCce-eccCCCCcc
Q 045528 156 HFCTVCGFSANY-TCVKCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~~~~Y-tC~~Cg~ry 176 (195)
.+|.|||..|.. -|-.|..-|
T Consensus 26 ~~C~vC~~~g~LL~CD~C~~~f 47 (88)
T 1fp0_A 26 TICRVCQKPGDLVMCNQCEFCF 47 (88)
T ss_dssp SCCSSSCSSSCCEECTTSSCEE
T ss_pred CcCcCcCCCCCEEECCCCCCce
Confidence 499999988866 788776644
No 243
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.87 E-value=27 Score=19.95 Aligned_cols=23 Identities=26% Similarity=0.475 Sum_probs=17.9
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|.-||..|-...=+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em5_A 11 KSHQCHECGRGFTLKSHLNQHQR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHT
T ss_pred CCeECCcCCCccCCHHHHHHHHH
Confidence 35888889998888877777754
No 244
>3j21_V 50S ribosomal protein L24E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=27.85 E-value=33 Score=23.80 Aligned_cols=41 Identities=27% Similarity=0.533 Sum_probs=24.4
Q ss_pred CcccccccCC---CCc---eeccCC-CCcccChhhhhhhcc---cccCccc
Q 045528 154 RRHFCTVCGF---SAN---YTCVKC-GMRFCCIRCQNIHDD---TRCLKFV 194 (195)
Q Consensus 154 ~r~fC~VCG~---~~~---YtC~~C-g~ryCS~~C~~~H~E---tRC~K~~ 194 (195)
+...|+.||+ +|. |.=.-+ -.+|||.+|...+.- -|=++||
T Consensus 3 ~~~~C~Fcg~~IyPG~G~~~Vr~Dgkvf~FcssKC~k~f~~krnPRkl~WT 53 (66)
T 3j21_V 3 RWNVCSYCGKPFEPGTGKMYVRNDGRVLFFCSRKCERYYFMGRNPRKLKWT 53 (66)
T ss_dssp CCCBCTTTCSBCCTTCCEEEECSSSCEEEESSHHHHHHHHTTCCTTTCSSS
T ss_pred ceeEecCcCCcccCCCCeEEEecCCcEEEEECHHHHHHHHcCCCcccchHH
Confidence 4568999997 442 211111 237899999877643 4445554
No 245
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.80 E-value=27 Score=19.86 Aligned_cols=23 Identities=26% Similarity=0.469 Sum_probs=17.6
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emy_A 11 NPYECHECGKAFSRKYQLISHQR 33 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHH
T ss_pred cCcCCCCCCcccCcHHHHHHHHH
Confidence 35888899998888777777653
No 246
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.78 E-value=26 Score=19.92 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=17.2
Q ss_pred CceeccCCCCcccChhhhhhhc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
..|.|..||..|-...=+..|.
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~ 32 (46)
T 2emh_A 11 RPYICTVCGKAFTDRSNLIKHQ 32 (46)
T ss_dssp CSEECTTTCCEESSHHHHHHHH
T ss_pred CCcCCCCCCchhCCHHHHHHHH
Confidence 3588888999888877777764
No 247
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.73 E-value=27 Score=19.88 Aligned_cols=22 Identities=27% Similarity=0.667 Sum_probs=17.1
Q ss_pred CceeccCCCCcccChhhhhhhc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
..|.|..||..|-...=+..|.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2emp_A 11 KPYMCNECGKAFSVYSSLTTHQ 32 (46)
T ss_dssp CSEECSSSCCEESCHHHHHHHH
T ss_pred cCeECCCCCchhCCHHHHHHHH
Confidence 3588888999888877777764
No 248
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=27.60 E-value=13 Score=34.81 Aligned_cols=32 Identities=22% Similarity=0.558 Sum_probs=0.0
Q ss_pred CCCCcccccccCC--CC----ceeccCCCCcccChhhhh
Q 045528 151 KTSRRHFCTVCGF--SA----NYTCVKCGMRFCCIRCQN 183 (195)
Q Consensus 151 ~~P~r~fC~VCG~--~~----~YtC~~Cg~ryCS~~C~~ 183 (195)
......||.+||. || .|.|..|| ..|-.+|..
T Consensus 44 ~~~~p~~C~~C~~~i~g~~~qg~~C~~C~-~~~H~~C~~ 81 (674)
T 3pfq_A 44 FFKQPTFCSHCTDFIWGFGKQGFQCQVCS-FVVHKRCHE 81 (674)
T ss_dssp ---------------------------------------
T ss_pred eCCCCCccccccccccccCCceeECCCCC-CCcChhhcC
No 249
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=27.60 E-value=19 Score=32.24 Aligned_cols=26 Identities=27% Similarity=0.428 Sum_probs=14.6
Q ss_pred ceeccCCCC-----cccChhhhhhhcccccC
Q 045528 166 NYTCVKCGM-----RFCCIRCQNIHDDTRCL 191 (195)
Q Consensus 166 ~YtC~~Cg~-----ryCS~~C~~~H~EtRC~ 191 (195)
.|.|..||. ||=+..=+-.++..+|.
T Consensus 155 ~y~C~~C~~~~rFPRYn~~~~ll~tr~G~C~ 185 (335)
T 1x3z_A 155 IYKCNRCGNITRFPRYNDPIKLLETRKGRCG 185 (335)
T ss_dssp EEEETTTCCEEEEEEECCHHHHHHHCEECHH
T ss_pred EeecCCCCcccccCCcCCHHHHHHhCCcChH
Confidence 478988987 44444433344444554
No 250
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=27.59 E-value=27 Score=24.56 Aligned_cols=10 Identities=30% Similarity=0.932 Sum_probs=4.5
Q ss_pred eccCCCCccc
Q 045528 168 TCVKCGMRFC 177 (195)
Q Consensus 168 tC~~Cg~ryC 177 (195)
+|..||-.||
T Consensus 37 ~~~~CgH~FC 46 (100)
T 3lrq_A 37 LCPHCSKLCC 46 (100)
T ss_dssp ECTTTCCEEE
T ss_pred ccCCCCChhh
Confidence 3344444444
No 251
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.50 E-value=25 Score=20.03 Aligned_cols=23 Identities=26% Similarity=0.569 Sum_probs=17.8
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2en1_A 11 KPFKCEECGKRFTQNSQLHSHQR 33 (46)
T ss_dssp CSEEETTTTEEESSHHHHHHHGG
T ss_pred CCeeCCCCCcccCCHHHHHHHHH
Confidence 35888888998888777777754
No 252
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=27.45 E-value=27 Score=25.33 Aligned_cols=24 Identities=25% Similarity=0.664 Sum_probs=19.8
Q ss_pred ccccccC-CCCc-eeccC--CCCcccCh
Q 045528 156 HFCTVCG-FSAN-YTCVK--CGMRFCCI 179 (195)
Q Consensus 156 ~fC~VCG-~~~~-YtC~~--Cg~ryCS~ 179 (195)
..|++|+ ...+ +.|.. ||.-.|+.
T Consensus 26 ~~C~~C~~~~~~lw~CL~~~Cg~vgCgr 53 (97)
T 2uzg_A 26 GTCQDCKVQGPNLWACLENRCSYVGCGE 53 (97)
T ss_dssp TCCSSSCCCCSSCEEECCTTCCCEECCT
T ss_pred CcCcCcCCCCCCceeeecccCCCcccCC
Confidence 4799999 4445 89999 99999965
No 253
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.45 E-value=27 Score=19.88 Aligned_cols=22 Identities=27% Similarity=0.582 Sum_probs=16.8
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...=+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRR 33 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHT
T ss_pred CeECCCCCceeCCHHHHHHHHH
Confidence 5788888888888777777754
No 254
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.38 E-value=28 Score=19.76 Aligned_cols=22 Identities=27% Similarity=0.501 Sum_probs=17.2
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~ 33 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWR 33 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHT
T ss_pred CEECCccCchhCChHHHHHHhH
Confidence 5788888988888777777754
No 255
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.36 E-value=28 Score=19.81 Aligned_cols=23 Identities=26% Similarity=0.410 Sum_probs=17.6
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytk_A 11 KPYKCNECGKVFTQNSHLTNHWR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH
T ss_pred CCEeCCcCCCccCCHHHHHHHHH
Confidence 35889999998888777777643
No 256
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=27.17 E-value=29 Score=24.71 Aligned_cols=29 Identities=17% Similarity=0.535 Sum_probs=20.4
Q ss_pred cccccccCCCC-----c-eeccCCCCcccChhhhhh
Q 045528 155 RHFCTVCGFSA-----N-YTCVKCGMRFCCIRCQNI 184 (195)
Q Consensus 155 r~fC~VCG~~~-----~-YtC~~Cg~ryCS~~C~~~ 184 (195)
-.+|.|||..+ . .-|-.|...| =..|+..
T Consensus 25 ~~~C~vC~~~~s~~~~~ll~CD~C~~~f-H~~Cl~p 59 (88)
T 2l43_A 25 DAVCSICMDGESQNSNVILFCDMCNLAV-HQECYGV 59 (88)
T ss_dssp CCCCSSCCSSSSCSEEEEEECSSSCCCC-CHHHHTC
T ss_pred CCcCCcCCCCCCCCCCCEEECCCCCchh-hcccCCC
Confidence 35999999764 3 3899998765 4566654
No 257
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.14 E-value=26 Score=20.02 Aligned_cols=21 Identities=24% Similarity=0.398 Sum_probs=15.7
Q ss_pred ceeccCCCCcccChhhhhhhc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHL 32 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHH
Confidence 578888888887777666664
No 258
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=27.12 E-value=27 Score=20.65 Aligned_cols=21 Identities=24% Similarity=0.466 Sum_probs=13.9
Q ss_pred eeccCCCCcccChhhhhhhcc
Q 045528 167 YTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 167 YtC~~Cg~ryCS~~C~~~H~E 187 (195)
|.|..||..|-...-+..|..
T Consensus 30 ~~C~~C~~~f~~~~~l~~H~~ 50 (57)
T 1bbo_A 30 YHCTYCNFSFKTKGNLTKHMK 50 (57)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred ccCCCCCchhcCHHHHHHHHH
Confidence 567777777766666666643
No 259
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.03 E-value=23 Score=20.06 Aligned_cols=23 Identities=26% Similarity=0.531 Sum_probs=16.9
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytr_A 11 KPYKCNECGKAFSQTSKLARHQR 33 (46)
T ss_dssp CTTCCTTTCCCCSSHHHHHHHHT
T ss_pred cCcCCCCCCCccCCHHHHHHHHH
Confidence 35778888888887777777754
No 260
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=26.89 E-value=28 Score=19.89 Aligned_cols=22 Identities=27% Similarity=0.558 Sum_probs=16.8
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQR 33 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHH
T ss_pred ceECCCCCchhCCHHHHHHHHH
Confidence 4788888888888777777653
No 261
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=26.77 E-value=29 Score=22.88 Aligned_cols=21 Identities=24% Similarity=0.784 Sum_probs=16.2
Q ss_pred ccccccCCCCce-eccCCCCcc
Q 045528 156 HFCTVCGFSANY-TCVKCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~~~~Y-tC~~Cg~ry 176 (195)
.+|.|||..+.. .|-.|...|
T Consensus 12 ~~C~vC~~~g~ll~CD~C~~~f 33 (61)
T 2l5u_A 12 DYCEVCQQGGEIILCDTCPRAY 33 (61)
T ss_dssp SSCTTTSCCSSEEECSSSSCEE
T ss_pred CCCccCCCCCcEEECCCCChhh
Confidence 489999988766 888886643
No 262
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.76 E-value=25 Score=19.93 Aligned_cols=22 Identities=32% Similarity=0.745 Sum_probs=16.9
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...=+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHER 33 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHH
T ss_pred CeECCCCCCccCchHHHHHHHH
Confidence 5788888888888777777754
No 263
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.70 E-value=29 Score=19.74 Aligned_cols=22 Identities=27% Similarity=0.501 Sum_probs=16.8
Q ss_pred CceeccCCCCcccChhhhhhhc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
-.|.|..||..|-...=+..|.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2yu8_A 11 KPYKCNECGKVFTQNSHLARHR 32 (46)
T ss_dssp SSEECSSSCCEESSSHHHHHHT
T ss_pred CCeECCcCCchhCCHHHHHHHH
Confidence 3588888898888877777664
No 264
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.62 E-value=29 Score=19.71 Aligned_cols=23 Identities=30% Similarity=0.567 Sum_probs=17.5
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytd_A 11 KPYKCSECGKAFHRHTHLNEHRR 33 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH
T ss_pred cCeECCCCCCeeCChHHHHHHHH
Confidence 35888889998888777777743
No 265
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=26.59 E-value=31 Score=23.97 Aligned_cols=24 Identities=29% Similarity=0.753 Sum_probs=18.0
Q ss_pred ccccccCC-CC----ceeccCCCCcccCh
Q 045528 156 HFCTVCGF-SA----NYTCVKCGMRFCCI 179 (195)
Q Consensus 156 ~fC~VCG~-~~----~YtC~~Cg~ryCS~ 179 (195)
..|.+|+. ++ +.-|-.||.-||+.
T Consensus 20 ~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~ 48 (82)
T 2yw8_A 20 THCRQCEKEFSISRRKHHCRNCGHIFCNT 48 (82)
T ss_dssp CBCTTTCCBCBTTBCCEECTTTCCEECSG
T ss_pred CcccCcCCcccCccccccCCCCCCEEChH
Confidence 47888885 33 45899999988873
No 266
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=26.58 E-value=21 Score=27.59 Aligned_cols=18 Identities=33% Similarity=0.746 Sum_probs=10.6
Q ss_pred cccccCC---CCceeccCCCC
Q 045528 157 FCTVCGF---SANYTCVKCGM 174 (195)
Q Consensus 157 fC~VCG~---~~~YtC~~Cg~ 174 (195)
-|.-||. +....|+.||.
T Consensus 49 rC~~CG~~~~PPr~~Cp~C~s 69 (145)
T 3irb_A 49 KCSKCGRIFVPARSYCEHCFV 69 (145)
T ss_dssp ECTTTCCEEESCCSEETTTTE
T ss_pred EeCCCCcEEcCchhhCcCCCC
Confidence 4666664 34556666665
No 267
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.54 E-value=27 Score=19.86 Aligned_cols=23 Identities=30% Similarity=0.608 Sum_probs=17.3
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoq_A 11 KPFKCDICGKSFCGRSRLNRHSM 33 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHHHH
T ss_pred CCcCCCcCCchhCCHHHHHHHHH
Confidence 35788888988888777777643
No 268
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=26.52 E-value=21 Score=24.25 Aligned_cols=22 Identities=36% Similarity=0.877 Sum_probs=18.0
Q ss_pred cccccCCCC----ceeccCCCCcccC
Q 045528 157 FCTVCGFSA----NYTCVKCGMRFCC 178 (195)
Q Consensus 157 fC~VCG~~~----~YtC~~Cg~ryCS 178 (195)
.|-.|+..- .|.|++|+.-||-
T Consensus 17 ~C~~C~~~~~~~~~y~C~~C~~~FC~ 42 (59)
T 1z60_A 17 FCYGCQGELKDQHVYVCAVCQNVFCV 42 (59)
T ss_dssp EETTTTEECTTSEEECCTTTTCCBCH
T ss_pred cccccCcccCCCccEECCccCcCccc
Confidence 688888722 5999999999985
No 269
>1jjd_A Metallothionein, SMTA; zinc finger, zinc cluster, metal binding PR; NMR {Synechococcus elongatus} SCOP: g.46.1.1
Probab=26.34 E-value=18 Score=24.35 Aligned_cols=16 Identities=25% Similarity=0.729 Sum_probs=14.0
Q ss_pred CCcccChhhhhhhccc
Q 045528 173 GMRFCCIRCQNIHDDT 188 (195)
Q Consensus 173 g~ryCS~~C~~~H~Et 188 (195)
|..|||..|.+.|...
T Consensus 27 GK~YCSe~Ca~gH~~~ 42 (55)
T 1jjd_A 27 GLYYCSEACADGHTGG 42 (55)
T ss_dssp SCEESSHHHHHTSCSS
T ss_pred CeEEehHHHHccCCCC
Confidence 7789999999999763
No 270
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=26.04 E-value=25 Score=23.54 Aligned_cols=22 Identities=23% Similarity=0.363 Sum_probs=18.0
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 13 py~C~~CgK~F~~~s~L~~H~r 34 (66)
T 2epp_A 13 ILPCGLCGKVFTDANRLRQHEA 34 (66)
T ss_dssp CCCCTTTCCCCSCHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHhhhh
Confidence 5788889999888888887765
No 271
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=25.80 E-value=31 Score=20.22 Aligned_cols=23 Identities=22% Similarity=0.420 Sum_probs=17.7
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
++++|+.|....=..+=+.+|-|
T Consensus 2 ~k~~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 2 SDFCCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp CCEECTTSSCEESSHHHHHHHHH
T ss_pred CcccCccccccCcChHHHHHHHH
Confidence 56788888888777777777766
No 272
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=25.50 E-value=29 Score=20.76 Aligned_cols=21 Identities=24% Similarity=0.346 Sum_probs=17.6
Q ss_pred ceeccCCCCcccChhhhhhhc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
.|.|..||..|-...-+..|.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~ 50 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHA 50 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHH
Confidence 488999999998888888884
No 273
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=25.47 E-value=30 Score=23.50 Aligned_cols=24 Identities=29% Similarity=0.735 Sum_probs=19.1
Q ss_pred ccccccCC-CC----ceeccCCCCcccCh
Q 045528 156 HFCTVCGF-SA----NYTCVKCGMRFCCI 179 (195)
Q Consensus 156 ~fC~VCG~-~~----~YtC~~Cg~ryCS~ 179 (195)
..|.+|+. ++ +.-|-.||.-||+.
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~ 40 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQE 40 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGG
T ss_pred CcccCCCCccCCccccccCCCCCEEEccc
Confidence 37999996 43 57899999999875
No 274
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=25.33 E-value=33 Score=23.95 Aligned_cols=10 Identities=20% Similarity=0.488 Sum_probs=5.5
Q ss_pred eeccCCCCcc
Q 045528 167 YTCVKCGMRF 176 (195)
Q Consensus 167 YtC~~Cg~ry 176 (195)
.+||-|...+
T Consensus 59 ~~CP~Cr~~~ 68 (112)
T 1jm7_A 59 SQCPLCKNDI 68 (112)
T ss_dssp CCCTTTSCCC
T ss_pred CCCcCCCCcC
Confidence 4566665543
No 275
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=25.31 E-value=35 Score=25.47 Aligned_cols=22 Identities=32% Similarity=0.742 Sum_probs=14.6
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|.-||..|=...-+..|..
T Consensus 161 ~~~C~~C~~~f~~~~~L~~H~~ 182 (190)
T 2i13_A 161 PYKCPECGKSFSRRDALNVHQR 182 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHT
T ss_pred CeECCCCCCccCCHHHHHHHHH
Confidence 3677777777766666666654
No 276
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=25.21 E-value=23 Score=20.14 Aligned_cols=22 Identities=32% Similarity=0.627 Sum_probs=16.4
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~ 31 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVR 31 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHH
Confidence 5788888888877777766643
No 277
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=25.19 E-value=30 Score=24.84 Aligned_cols=8 Identities=25% Similarity=0.920 Sum_probs=6.2
Q ss_pred ccccccCC
Q 045528 156 HFCTVCGF 163 (195)
Q Consensus 156 ~fC~VCG~ 163 (195)
-.|.||.|
T Consensus 18 WVCpICsf 25 (76)
T 2j9u_B 18 WVCPICMV 25 (76)
T ss_dssp EECTTTCC
T ss_pred eECccccc
Confidence 38999985
No 278
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=25.15 E-value=21 Score=23.60 Aligned_cols=12 Identities=50% Similarity=0.891 Sum_probs=6.2
Q ss_pred CceeccCCCCcc
Q 045528 165 ANYTCVKCGMRF 176 (195)
Q Consensus 165 ~~YtC~~Cg~ry 176 (195)
+.|.|.+||.-+
T Consensus 2 ~iY~C~rCg~~f 13 (48)
T 4ayb_P 2 AVYRCGKCWKTF 13 (48)
T ss_dssp ---CCCCTTTTC
T ss_pred cEEEeeccCCCc
Confidence 357777777643
No 279
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.12 E-value=8.3 Score=23.97 Aligned_cols=32 Identities=25% Similarity=0.535 Sum_probs=22.7
Q ss_pred ccccccCCC----------CceeccCCCCcccChhhhhhhcc
Q 045528 156 HFCTVCGFS----------ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 156 ~fC~VCG~~----------~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.+||.. ..|.|..||..|-...-+..|..
T Consensus 19 ~~C~~C~k~f~~~~~l~~~~~~~C~~C~~~f~~~~~l~~H~~ 60 (73)
T 2ctu_A 19 QKCSKCGIIFIRRSTLSRRKTPMCEKCRKDSCQEAALNKDEG 60 (73)
T ss_dssp EECSSSCCEEECCCCCCCSSSCCCHHHHHTCSCCCSSCCCSS
T ss_pred eeCCcccchhCCHHHhCcCCCCCCCCCChhhcCHHHHHHHHH
Confidence 578888852 35788888888877776666654
No 280
>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.09 E-value=26 Score=27.36 Aligned_cols=31 Identities=29% Similarity=0.816 Sum_probs=24.4
Q ss_pred ccccccCCCC-ceeccCCCCcccChhhhhhhcc
Q 045528 156 HFCTVCGFSA-NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 156 ~fC~VCG~~~-~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.-||-.+ .|.++.-|...| +.|-.+|+.
T Consensus 30 ~~CaDCga~~P~WaS~n~GvfiC-~~CsgiHR~ 61 (141)
T 2crr_A 30 KYCADCEAKGPRWASWNIGVFIC-IRCAGIHRN 61 (141)
T ss_dssp SSCSSSCCSSCCSEETTTTEECC-HHHHHHHHH
T ss_pred CcCCCCCCCCCCeEEeccCeEEh-hhhhHhHhc
Confidence 5899999855 577777888775 789899986
No 281
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.07 E-value=31 Score=19.56 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=17.2
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yso_A 11 KSHQCRECGEIFFQYVSLIEHQV 33 (46)
T ss_dssp CCEECTTTCCEESSHHHHHHHHH
T ss_pred CCEEccccChhhCCHHHHHHHHH
Confidence 35888889998888777776643
No 282
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.00 E-value=30 Score=22.03 Aligned_cols=21 Identities=29% Similarity=0.551 Sum_probs=18.2
Q ss_pred ceeccCCCCcccChhhhhhhc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
.|.|..||..|-...-+..|.
T Consensus 38 ~~~C~~C~k~f~~~~~L~~H~ 58 (78)
T 2d9h_A 38 RFPCEFCGKRFEKPDSVAAHR 58 (78)
T ss_dssp CEECTTTCCEESSHHHHHHHH
T ss_pred ccCCCCCCchhCCHHHHHHHH
Confidence 589999999999888888876
No 283
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=24.82 E-value=33 Score=17.56 Aligned_cols=22 Identities=27% Similarity=0.554 Sum_probs=16.2
Q ss_pred ceecc--CCCCcccChhhhhhhcc
Q 045528 166 NYTCV--KCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~--~Cg~ryCS~~C~~~H~E 187 (195)
.|.|. .||..|-...=+..|.-
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~ 25 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKR 25 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHT
T ss_pred CcCCcCCCCCcccCCHhHHHHHHH
Confidence 36786 88888887777777754
No 284
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=24.67 E-value=30 Score=21.61 Aligned_cols=22 Identities=18% Similarity=0.303 Sum_probs=17.5
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...=+..|..
T Consensus 49 ~~~C~~C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 49 PFQCRICMRNFSRSDHLTTHIR 70 (73)
T ss_dssp CEECTTTCCEESCHHHHHHHHT
T ss_pred CeECCCCCchhCCHHHHHHHHH
Confidence 4889999998888877777754
No 285
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.65 E-value=28 Score=19.82 Aligned_cols=22 Identities=27% Similarity=0.431 Sum_probs=16.6
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWI 33 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHT
T ss_pred CeeCCCCCcccCCHHHHHHHHH
Confidence 5788888888888777777653
No 286
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.63 E-value=25 Score=19.95 Aligned_cols=23 Identities=26% Similarity=0.486 Sum_probs=17.3
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...=+..|..
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eoe_A 11 KPYKCNECGKVFTQNSHLANHQR 33 (46)
T ss_dssp CSSEETTTTEECSSHHHHHHHHG
T ss_pred CCeECCCcChhhCCHHHHHHHHH
Confidence 35788888888888777777754
No 287
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.62 E-value=30 Score=20.08 Aligned_cols=22 Identities=27% Similarity=0.393 Sum_probs=16.0
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (48)
T 2epr_A 12 QVACEICGKIFRDVYHLNRHKL 33 (48)
T ss_dssp SEEETTTTEEESSHHHHHHHGG
T ss_pred CeeCCCCCcccCCHHHHHHHHH
Confidence 4677777888877777777754
No 288
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.59 E-value=32 Score=20.58 Aligned_cols=21 Identities=33% Similarity=0.520 Sum_probs=16.3
Q ss_pred ceeccCCCCcccChhhhhhhc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
.|.|..||..|-...-+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (54)
T 2eps_A 12 PYICQSCGKGFSRPDHLNGHI 32 (54)
T ss_dssp CEECSSSCCEESSHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHH
Confidence 478888888888877777774
No 289
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=24.58 E-value=46 Score=22.75 Aligned_cols=22 Identities=23% Similarity=0.791 Sum_probs=16.1
Q ss_pred CcccccccCCC---CceeccCCCCc
Q 045528 154 RRHFCTVCGFS---ANYTCVKCGMR 175 (195)
Q Consensus 154 ~r~fC~VCG~~---~~YtC~~Cg~r 175 (195)
...||..||.. ..|.|..||.-
T Consensus 34 ~pt~C~~C~~~l~~qG~kC~~C~~~ 58 (72)
T 2fnf_X 34 GPGWCDLCGREVLRQALRCANCKFT 58 (72)
T ss_dssp SCCBCTTTSSBCSSCCEECTTSSCE
T ss_pred CCcchhhhhHHHHhCcCccCCCCCe
Confidence 34699999972 46789887753
No 290
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.54 E-value=31 Score=21.97 Aligned_cols=22 Identities=14% Similarity=0.339 Sum_probs=18.5
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 45 ~~~C~~C~~~f~~~~~L~~H~~ 66 (77)
T 2ct1_A 45 KFHCPHCDTVIARKSDLGVHLR 66 (77)
T ss_dssp SEECSSSSCEESSHHHHHHHHH
T ss_pred ccCCCCCCCccCCHHHHHHHHH
Confidence 4899999999988888888765
No 291
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.45 E-value=33 Score=19.25 Aligned_cols=22 Identities=18% Similarity=0.458 Sum_probs=16.8
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...=+..|..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~ 31 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQ 31 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 5888888988888777776643
No 292
>2crw_A ARF GAP 3, ADP-ribosylation factor GTPase-activating protein 3; arfgap domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.39 E-value=33 Score=27.19 Aligned_cols=32 Identities=25% Similarity=0.730 Sum_probs=25.2
Q ss_pred cccccccCCCC-ceeccCCCCcccChhhhhhhcc
Q 045528 155 RHFCTVCGFSA-NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 155 r~fC~VCG~~~-~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-..|.-||... .+.++.-|...| +.|-.+|+.
T Consensus 29 N~~CaDCga~~P~WaS~n~GvfiC-~~CsgiHR~ 61 (149)
T 2crw_A 29 NKVCFDCGAKNPSWASITYGVFLC-IDCSGSHRS 61 (149)
T ss_dssp TSBCSSSCCBSCCCEETTTTEECC-HHHHHHHHH
T ss_pred CCcCCCCcCCCCCcEEeccCEEEc-hhcchhhcc
Confidence 35899999844 677888888875 789999986
No 293
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=24.39 E-value=32 Score=24.34 Aligned_cols=22 Identities=36% Similarity=1.044 Sum_probs=15.1
Q ss_pred cccccccCCCC-------ceeccCCCCcc
Q 045528 155 RHFCTVCGFSA-------NYTCVKCGMRF 176 (195)
Q Consensus 155 r~fC~VCG~~~-------~YtC~~Cg~ry 176 (195)
.+.|+.||... ...|.+||.-+
T Consensus 27 ky~C~fCgk~~vkR~a~GIW~C~~C~~~~ 55 (73)
T 1ffk_W 27 KYKCPVCGFPKLKRASTSIWVCGHCGYKI 55 (73)
T ss_pred CccCCCCCCceeEEEEeEEEECCCCCcEE
Confidence 47999999732 34577777654
No 294
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.32 E-value=29 Score=19.89 Aligned_cols=22 Identities=27% Similarity=0.593 Sum_probs=16.1
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...=+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQR 33 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHH
T ss_pred CcCCCCCCchhCCHHHHHHHHH
Confidence 5788888888877777766643
No 295
>1r4i_A Androgen receptor; AR, steroid receptor, protein-DNA complex, transcription/DNA complex; 3.10A {Rattus norvegicus} SCOP: g.39.1.2
Probab=24.26 E-value=10 Score=28.32 Aligned_cols=20 Identities=30% Similarity=0.798 Sum_probs=14.1
Q ss_pred cccccccCC------CCceeccCCCC
Q 045528 155 RHFCTVCGF------SANYTCVKCGM 174 (195)
Q Consensus 155 r~fC~VCG~------~~~YtC~~Cg~ 174 (195)
...|.|||. +|.++|-.|-.
T Consensus 7 ~~~C~VCg~~a~g~hyGv~sC~aCk~ 32 (105)
T 1r4i_A 7 QKTCLICGDEASGAHYGALTCGSCKV 32 (105)
T ss_dssp CCBCSSSCSBEEEEETTEEEEHHHHH
T ss_pred CCCCcEeCCCCCceEeCCcchhhhhh
Confidence 468999996 44557777744
No 296
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.25 E-value=32 Score=22.63 Aligned_cols=23 Identities=30% Similarity=0.826 Sum_probs=17.3
Q ss_pred cccccccCC---CCceeccCCCCccc
Q 045528 155 RHFCTVCGF---SANYTCVKCGMRFC 177 (195)
Q Consensus 155 r~fC~VCG~---~~~YtC~~Cg~ryC 177 (195)
.-.|.+|.| .....|.-|+.+-=
T Consensus 11 ~W~C~~CT~~N~~~~~~C~~C~~pr~ 36 (53)
T 2d9g_A 11 YWDCSVCTFRNSAEAFKCMMCDVRKG 36 (53)
T ss_dssp CEECSSSCCEECSSCSSCSSSCCCCC
T ss_pred CcCCCCCccCCCCCCCccCCCCCcCC
Confidence 348999999 34559999988643
No 297
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.15 E-value=34 Score=19.37 Aligned_cols=22 Identities=23% Similarity=0.492 Sum_probs=16.7
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...=+..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQR 33 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH
T ss_pred CcCCCCCCCcCCChHHHHHHHH
Confidence 5788888888888777776643
No 298
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.92 E-value=43 Score=21.80 Aligned_cols=31 Identities=23% Similarity=0.593 Sum_probs=20.1
Q ss_pred CcccccccCC-CCceeccCCCCcccChhhhhhh
Q 045528 154 RRHFCTVCGF-SANYTCVKCGMRFCCIRCQNIH 185 (195)
Q Consensus 154 ~r~fC~VCG~-~~~YtC~~Cg~ryCS~~C~~~H 185 (195)
....|.||.. +..-.-..||-.|| ..|...+
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC-~~Ci~~~ 49 (85)
T 2ecv_A 18 EEVTCPICLELLTQPLSLDCGHSFC-QACLTAN 49 (85)
T ss_dssp CCCCCTTTCSCCSSCBCCSSSCCBC-TTHHHHH
T ss_pred CCCCCCCCCcccCCceeCCCCCHHH-HHHHHHH
Confidence 3458999986 33222347999988 5677665
No 299
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=23.54 E-value=37 Score=24.12 Aligned_cols=24 Identities=29% Similarity=0.751 Sum_probs=17.9
Q ss_pred ccccccCC-CC----ceeccCCCCcccCh
Q 045528 156 HFCTVCGF-SA----NYTCVKCGMRFCCI 179 (195)
Q Consensus 156 ~fC~VCG~-~~----~YtC~~Cg~ryCS~ 179 (195)
..|.+|+. ++ ++-|..||.-+|+.
T Consensus 21 ~~C~~C~~~F~~~~RrhhCr~CG~v~C~~ 49 (90)
T 3t7l_A 21 PNCMNCQVKFTFTKRRHHCRACGKVFCGV 49 (90)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGG
T ss_pred CcCcCCCCcccchhhCccccCCCCEECCc
Confidence 47888885 32 56899999888874
No 300
>2han_B Ecdysone receptor; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2 PDB: 1r0o_B 1r0n_B
Probab=23.34 E-value=13 Score=28.35 Aligned_cols=19 Identities=37% Similarity=0.789 Sum_probs=13.5
Q ss_pred ccccccCC------CCceeccCCCC
Q 045528 156 HFCTVCGF------SANYTCVKCGM 174 (195)
Q Consensus 156 ~fC~VCG~------~~~YtC~~Cg~ 174 (195)
..|.|||. +|.++|-.|-.
T Consensus 9 ~~C~VCg~~a~g~hyGv~sC~aCk~ 33 (119)
T 2han_B 9 ELCLVCGDRASGYHYNALTCEGCKG 33 (119)
T ss_dssp CBCTTTCSBCCEEETTEEECHHHHH
T ss_pred CcCeEeCCcCCcceECchhHHhhHH
Confidence 58999996 44557777743
No 301
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.12 E-value=35 Score=21.45 Aligned_cols=21 Identities=33% Similarity=0.651 Sum_probs=12.1
Q ss_pred ceeccCCCCcccChhhhhhhc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHD 186 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~ 186 (195)
.|.|..||..|-...-+..|.
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~ 34 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQ 34 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHH
Confidence 456666666666555555543
No 302
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=23.10 E-value=34 Score=31.08 Aligned_cols=31 Identities=19% Similarity=0.697 Sum_probs=25.4
Q ss_pred cccccccCCCC-ceecc--CCCCcccChhhhhhhc
Q 045528 155 RHFCTVCGFSA-NYTCV--KCGMRFCCIRCQNIHD 186 (195)
Q Consensus 155 r~fC~VCG~~~-~YtC~--~Cg~ryCS~~C~~~H~ 186 (195)
-..|.+||.-+ -|-|- .|..-|| ..|...+-
T Consensus 93 ~~yCr~C~~Gg~l~~Cdn~~C~r~FC-~~Ci~~n~ 126 (386)
T 2pv0_B 93 QSYCSICCSGETLLICGNPDCTRCYC-FECVDSLV 126 (386)
T ss_dssp BCSCTTTCCCSSCEECCSTTCCCEEC-HHHHHHHT
T ss_pred cccceEcCCCCeEEEeCCCCCCcchH-HHHHHHhc
Confidence 35999999877 45998 9999999 88987664
No 303
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.89 E-value=39 Score=23.11 Aligned_cols=24 Identities=29% Similarity=0.783 Sum_probs=19.3
Q ss_pred ccccc--cCCCC--ceeccCCCCcccCh
Q 045528 156 HFCTV--CGFSA--NYTCVKCGMRFCCI 179 (195)
Q Consensus 156 ~fC~V--CG~~~--~YtC~~Cg~ryCS~ 179 (195)
.-|++ |+..+ .+.|..|+..||..
T Consensus 13 ~~Cs~~~Ck~~~ll~f~C~~C~~~FC~~ 40 (63)
T 1x4v_A 13 NKCERAGCRQREMMKLTCERCSRNFCIK 40 (63)
T ss_dssp CCCCSTTCCCCCSSCCBCSSSCCBCCHH
T ss_pred CCCCccCCCCCCccceECCCCCcccCcc
Confidence 46999 98533 67999999999974
No 304
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=22.75 E-value=51 Score=26.32 Aligned_cols=33 Identities=6% Similarity=-0.085 Sum_probs=20.7
Q ss_pred CCCcccccccCC-CCceeccCCCCcccChhhhhhh
Q 045528 152 TSRRHFCTVCGF-SANYTCVKCGMRFCCIRCQNIH 185 (195)
Q Consensus 152 ~P~r~fC~VCG~-~~~YtC~~Cg~ryCS~~C~~~H 185 (195)
.|.-..|+||+. +..-....||.-||. .|...|
T Consensus 205 ~~~~~~c~i~~~~~~dPv~~~~gh~f~~-~~i~~~ 238 (281)
T 2c2l_A 205 IPDYLCGKISFELMREPCITPSGITYDR-KDIEEH 238 (281)
T ss_dssp CCSTTBCTTTCSBCSSEEECSSCCEEET-THHHHH
T ss_pred CCcccCCcCcCCHhcCCeECCCCCEECH-HHHHHH
Confidence 344457899986 444455568988884 454443
No 305
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=22.72 E-value=39 Score=20.35 Aligned_cols=20 Identities=25% Similarity=0.604 Sum_probs=14.8
Q ss_pred ccccccCC---CCceeccCCCCc
Q 045528 156 HFCTVCGF---SANYTCVKCGMR 175 (195)
Q Consensus 156 ~fC~VCG~---~~~YtC~~Cg~r 175 (195)
--|.||-+ .....|+.|.++
T Consensus 8 W~C~~C~~~N~~~~~kC~aC~tp 30 (33)
T 3gj3_B 8 WDCDTCLVQNKPEAVKCVACETP 30 (33)
T ss_dssp EECTTTCCEECTTCSBCTTTCCB
T ss_pred eeCCcccCCCccccCEEcccCCC
Confidence 37999987 335599999764
No 306
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.33 E-value=31 Score=19.57 Aligned_cols=23 Identities=26% Similarity=0.563 Sum_probs=17.3
Q ss_pred CceeccCCCCcccChhhhhhhcc
Q 045528 165 ANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 165 ~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
..|.|..||..|-...-+..|..
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2en6_A 11 KPYGCNECGKTFSQKSILSAHQR 33 (46)
T ss_dssp CCEEETTTTEEESSHHHHHHHHH
T ss_pred cCeECCCCCcccCchHHHHHHHH
Confidence 35888888888888777777643
No 307
>2owa_A Arfgap-like finger domain containing protein; zinc finger protein, cysteine-rich motif, GTPase activation; 2.00A {Cryptosporidium parvum iowa II}
Probab=22.13 E-value=38 Score=26.44 Aligned_cols=32 Identities=16% Similarity=0.485 Sum_probs=25.1
Q ss_pred cccccccCCCC-ceeccCCCCcccChhhhhhhcc
Q 045528 155 RHFCTVCGFSA-NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 155 r~fC~VCG~~~-~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
-..|.-||... .+.++.-|...| +.|-.+|+.
T Consensus 36 N~~CaDCga~~P~WaS~n~GvfiC-~~CsgiHR~ 68 (138)
T 2owa_A 36 NRTCFDCESRNPTWLSLSFAVFIC-LNCSSDHRK 68 (138)
T ss_dssp GGBCTTTCCBSCCEEETTTTEEEC-HHHHHHHHT
T ss_pred CCcCCCCcCCCCCeEEecCCEEEh-HhhhHHHhC
Confidence 45899999844 677888888875 789999986
No 308
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.96 E-value=53 Score=21.04 Aligned_cols=34 Identities=21% Similarity=0.644 Sum_probs=23.2
Q ss_pred CCcccccccCC-CCceeccCCCCcccChhhhhhhcc
Q 045528 153 SRRHFCTVCGF-SANYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 153 P~r~fC~VCG~-~~~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.....|.||.. +..-.-..||-.|| ..|...+-.
T Consensus 18 ~~~~~C~IC~~~~~~~~~~~CgH~fC-~~Ci~~~~~ 52 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTIDCGHNFC-LKCITQIGE 52 (73)
T ss_dssp CCCCBCTTTCSBCSSEEECTTCCEEE-HHHHHHHCS
T ss_pred ccCCEeccCCcccCCeEEcCCCChhh-HHHHHHHHH
Confidence 33458999986 33434458999998 578776653
No 309
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=21.55 E-value=43 Score=23.74 Aligned_cols=28 Identities=18% Similarity=0.476 Sum_probs=13.9
Q ss_pred cccccCC-CCceeccCCCCcccChhhhhhh
Q 045528 157 FCTVCGF-SANYTCVKCGMRFCCIRCQNIH 185 (195)
Q Consensus 157 fC~VCG~-~~~YtC~~Cg~ryCS~~C~~~H 185 (195)
.|.||.. +..-.-..||-.|| ..|...+
T Consensus 17 ~C~iC~~~~~~p~~~~CgH~fC-~~Ci~~~ 45 (115)
T 3l11_A 17 QCGICMEILVEPVTLPCNHTLC-KPCFQST 45 (115)
T ss_dssp BCTTTCSBCSSCEECTTSCEEC-HHHHCCC
T ss_pred CCccCCcccCceeEcCCCCHHh-HHHHHHH
Confidence 5666653 22222335666666 3455443
No 310
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=21.52 E-value=55 Score=21.32 Aligned_cols=22 Identities=23% Similarity=0.794 Sum_probs=16.2
Q ss_pred CCcccccccCC---CCceeccCCCC
Q 045528 153 SRRHFCTVCGF---SANYTCVKCGM 174 (195)
Q Consensus 153 P~r~fC~VCG~---~~~YtC~~Cg~ 174 (195)
....||..||. .-.|.|..||.
T Consensus 20 ~~pt~C~~C~~~i~kqg~kC~~C~~ 44 (59)
T 1rfh_A 20 GGPGWCDLCGREVLRQALRCANCKF 44 (59)
T ss_dssp SCCEECTTTCSEECSCCEECTTTSC
T ss_pred CCCeEchhcchhhhhCccEeCCCCC
Confidence 33469999997 24678988775
No 311
>1x0t_A Ribonuclease P protein component 4; pyrococcus horikoshii OT3, hydrolase; 1.60A {Pyrococcus horikoshii} PDB: 2zae_B
Probab=21.45 E-value=31 Score=26.03 Aligned_cols=10 Identities=30% Similarity=1.019 Sum_probs=7.4
Q ss_pred CcccccccCC
Q 045528 154 RRHFCTVCGF 163 (195)
Q Consensus 154 ~r~fC~VCG~ 163 (195)
.|.||--||.
T Consensus 64 KR~~Ck~C~s 73 (120)
T 1x0t_A 64 KRRYCKRCHT 73 (120)
T ss_dssp TTSBCTTTCC
T ss_pred HHHhccCCCC
Confidence 3568888876
No 312
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=21.44 E-value=34 Score=28.54 Aligned_cols=20 Identities=25% Similarity=0.772 Sum_probs=16.0
Q ss_pred cccccccCC----------CCceeccCCCC
Q 045528 155 RHFCTVCGF----------SANYTCVKCGM 174 (195)
Q Consensus 155 r~fC~VCG~----------~~~YtC~~Cg~ 174 (195)
..+|..||. .|.+.|..||.
T Consensus 21 ~~~CPECGs~~t~IV~D~erGE~VCsdCGL 50 (197)
T 3k1f_M 21 VLTCPECKVYPPKIVERFSEGDVVCALCGL 50 (197)
T ss_dssp CCCCTTTCCSSCCEEEEGGGTEEEETTTCB
T ss_pred CeECcCCCCcCCeEEEeCCCCEEEEcCCCC
Confidence 458999996 46778999986
No 313
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.30 E-value=43 Score=18.01 Aligned_cols=22 Identities=27% Similarity=0.661 Sum_probs=17.4
Q ss_pred ceecc--CCCCcccChhhhhhhcc
Q 045528 166 NYTCV--KCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~--~Cg~ryCS~~C~~~H~E 187 (195)
.|.|. .||..|-...-+..|..
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~ 29 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKH 29 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHH
Confidence 58888 69999988887777754
No 314
>2ebl_A COUP transcription factor 1; DNA-binding, metal-binding, nuclear protein, receptor, transcription regulation, zinc, EAR3, erbal3 tfcoup1; NMR {Homo sapiens}
Probab=21.29 E-value=15 Score=26.51 Aligned_cols=19 Identities=37% Similarity=0.821 Sum_probs=12.9
Q ss_pred ccccccCC------CCceeccCCCC
Q 045528 156 HFCTVCGF------SANYTCVKCGM 174 (195)
Q Consensus 156 ~fC~VCG~------~~~YtC~~Cg~ 174 (195)
..|.|||. +|.++|-.|-.
T Consensus 8 ~~C~VCg~~a~g~hyGv~sC~aCk~ 32 (89)
T 2ebl_A 8 IECVVCGDKSSGKHYGQFTCEGCKS 32 (89)
T ss_dssp CBCTTTCSBCCSEETTEECCHHHHH
T ss_pred CCCcEeCCCCcceEeCchhhHHhhh
Confidence 58999996 34456766644
No 315
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=21.25 E-value=27 Score=24.44 Aligned_cols=6 Identities=67% Similarity=1.741 Sum_probs=3.2
Q ss_pred eccCCCC
Q 045528 168 TCVKCGM 174 (195)
Q Consensus 168 tC~~Cg~ 174 (195)
.|| ||.
T Consensus 23 ~C~-CG~ 28 (71)
T 1gh9_A 23 KCV-CGR 28 (71)
T ss_dssp EET-TTE
T ss_pred ECC-CCC
Confidence 455 554
No 316
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=21.24 E-value=56 Score=22.44 Aligned_cols=33 Identities=6% Similarity=-0.113 Sum_probs=19.4
Q ss_pred CCCcccccccCC-CCceeccCCCCcccChhhhhhh
Q 045528 152 TSRRHFCTVCGF-SANYTCVKCGMRFCCIRCQNIH 185 (195)
Q Consensus 152 ~P~r~fC~VCG~-~~~YtC~~Cg~ryCS~~C~~~H 185 (195)
.|....|+||+. ...=....||.-||- .|...|
T Consensus 11 ~p~~~~CpI~~~~m~dPV~~~cGhtf~r-~~I~~~ 44 (85)
T 2kr4_A 11 APDEFRDPLMDTLMTDPVRLPSGTVMDR-SIILRH 44 (85)
T ss_dssp CCTTTBCTTTCSBCSSEEECTTSCEEEH-HHHHHH
T ss_pred CchheECcccCchhcCCeECCCCCEECH-HHHHHH
Confidence 344567888886 333344458888873 454444
No 317
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=21.18 E-value=46 Score=24.01 Aligned_cols=21 Identities=24% Similarity=0.640 Sum_probs=12.1
Q ss_pred ccccccCC-C---CceeccCCCCcc
Q 045528 156 HFCTVCGF-S---ANYTCVKCGMRF 176 (195)
Q Consensus 156 ~fC~VCG~-~---~~YtC~~Cg~ry 176 (195)
.||.-|=. | +.++||-|...+
T Consensus 73 ~fC~~Ci~~~~~~~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 73 NVCKDCLDRSFRAQVFSCPACRYDL 97 (124)
T ss_dssp EEEHHHHHHHHHTTCCBCTTTCCBC
T ss_pred cccHHHHHHHHhHCcCCCCCCCccC
Confidence 36766643 1 345777776655
No 318
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.14 E-value=59 Score=22.61 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=17.8
Q ss_pred CCcccccccCC-CC-ceeccCCCCcccC
Q 045528 153 SRRHFCTVCGF-SA-NYTCVKCGMRFCC 178 (195)
Q Consensus 153 P~r~fC~VCG~-~~-~YtC~~Cg~ryCS 178 (195)
+....|+||+. +. -++-+.||--||-
T Consensus 5 ~~~~~CPI~~~~~~dPV~~~~cGh~f~r 32 (94)
T 2yu4_A 5 SSGFTCPITKEEMKKPVKNKVCGHTYEE 32 (94)
T ss_dssp SSCCBCTTTCSBCSSEEEESSSCCEEEH
T ss_pred CcEeECcCcCchhcCCEEcCCCCCeecH
Confidence 44468999996 33 3454569998873
No 319
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=21.06 E-value=43 Score=24.44 Aligned_cols=28 Identities=21% Similarity=0.529 Sum_probs=17.9
Q ss_pred cccccccCCC---------Cc-eeccCCCCcccChhhhh
Q 045528 155 RHFCTVCGFS---------AN-YTCVKCGMRFCCIRCQN 183 (195)
Q Consensus 155 r~fC~VCG~~---------~~-YtC~~Cg~ryCS~~C~~ 183 (195)
..+|.+|+.. +. +.|..|+..|=. .|++
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~-~Cl~ 42 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHP-SCLK 42 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECH-HHHT
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCC-chhc
Confidence 3688888543 23 378888887732 4554
No 320
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=21.03 E-value=41 Score=27.19 Aligned_cols=24 Identities=29% Similarity=0.786 Sum_probs=19.6
Q ss_pred ccccccCC-CC----ceeccCCCCcccCh
Q 045528 156 HFCTVCGF-SA----NYTCVKCGMRFCCI 179 (195)
Q Consensus 156 ~fC~VCG~-~~----~YtC~~Cg~ryCS~ 179 (195)
..|.+|+. ++ +.-|-.||.-||+.
T Consensus 162 ~~C~~C~~~F~~~~rrhhCr~CG~v~C~~ 190 (220)
T 1dvp_A 162 RVCHRCRVEFTFTNRKHHCRNCGQVFCGQ 190 (220)
T ss_dssp SBCTTTCCBCCSSSCCEECTTTCCEECST
T ss_pred CccCCCCCccCCcccccccCCcCCEEChH
Confidence 58999996 33 56899999999984
No 321
>4hn5_A Glucocorticoid receptor; glucocorticoid receptor, steroid receptors, NGRE, repre transcription; HET: DNA; 1.90A {Homo sapiens} PDB: 4hn6_A*
Probab=21.03 E-value=12 Score=28.45 Aligned_cols=19 Identities=32% Similarity=0.787 Sum_probs=13.9
Q ss_pred ccccccCCC------CceeccCCCC
Q 045528 156 HFCTVCGFS------ANYTCVKCGM 174 (195)
Q Consensus 156 ~fC~VCG~~------~~YtC~~Cg~ 174 (195)
..|.|||.. |.++|-.|-.
T Consensus 30 ~~C~VCgd~a~G~HyGv~sC~aCk~ 54 (117)
T 4hn5_A 30 KLCLVCSDEASGCHYGVLTCGSCKV 54 (117)
T ss_dssp CBCTTTCSBCCEEETTEEECHHHHH
T ss_pred CcCCcCCCcCcccccCCcccchhhh
Confidence 489999973 4458888843
No 322
>2gnr_A Conserved hypothetical protein; 13815350, structural genomics, PSI, protein structure initiative; 1.80A {Sulfolobus solfataricus P2} PDB: 3irb_A
Probab=20.97 E-value=34 Score=26.56 Aligned_cols=20 Identities=30% Similarity=0.713 Sum_probs=14.6
Q ss_pred ccccccCC---CCceeccCCCCc
Q 045528 156 HFCTVCGF---SANYTCVKCGMR 175 (195)
Q Consensus 156 ~fC~VCG~---~~~YtC~~Cg~r 175 (195)
.-|.-||. +....|+.||..
T Consensus 48 ~rC~~CG~~~fPPr~~Cp~C~s~ 70 (145)
T 2gnr_A 48 SKCSKCGRIFVPARSYCEHCFVK 70 (145)
T ss_dssp EECTTTCCEEESCCSEETTTTEE
T ss_pred EEECCCCcEEeCCCCCCCCCCCC
Confidence 36888885 566688888764
No 323
>1vq8_U 50S ribosomal protein L24E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.39.1.6 PDB: 1giy_R 1jj2_T 1k73_V* 1k8a_V* 1k9m_V* 1kc8_V* 1kd1_V* 1kqs_T* 1m1k_V* 1m90_V* 1ml5_r* 1n8r_V* 1nji_V* 1q7y_V* 1q81_V* 1q82_V* 1q86_V* 1qvf_T 1qvg_T 1s72_U* ...
Probab=20.95 E-value=52 Score=22.81 Aligned_cols=40 Identities=30% Similarity=0.571 Sum_probs=22.4
Q ss_pred cccccccCC---CCce--eccCCC--CcccChhhhhhhcc---cccCccc
Q 045528 155 RHFCTVCGF---SANY--TCVKCG--MRFCCIRCQNIHDD---TRCLKFV 194 (195)
Q Consensus 155 r~fC~VCG~---~~~Y--tC~~Cg--~ryCS~~C~~~H~E---tRC~K~~ 194 (195)
...|+.||+ +|.- --.+=| .+|||.+|...+.- -|=++||
T Consensus 3 ~~~C~Fcg~~IyPG~G~~~Vr~Dgkvf~FcssKc~k~f~~krnPRkl~WT 52 (66)
T 1vq8_U 3 TRECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWT 52 (66)
T ss_dssp -CBCTTTCCBCCSSCCEEEECTTSCEEEESCHHHHHHHHTTCCGGGCTTS
T ss_pred eeEecCcCCcccCCCceEEEeeCCcEEEEECHHHHHHHHcccCcccchhH
Confidence 358999997 3321 111111 26799999877643 4445554
No 324
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=20.76 E-value=42 Score=21.99 Aligned_cols=18 Identities=22% Similarity=0.670 Sum_probs=13.1
Q ss_pred ccccccCCCCce---eccCCC
Q 045528 156 HFCTVCGFSANY---TCVKCG 173 (195)
Q Consensus 156 ~fC~VCG~~~~Y---tC~~Cg 173 (195)
..|..|+..|.. +|+.|+
T Consensus 10 ~~C~~C~GsG~~~~~~C~~C~ 30 (53)
T 2bx9_A 10 VACPKCERAGEIEGTPCPACS 30 (53)
T ss_dssp EECTTTTTSSEETTEECTTTT
T ss_pred ccCCCCcceeccCCCCCccCC
Confidence 368888887643 788884
No 325
>3g9m_A Glucocorticoid receptor; glucocorticoid, DNA-binding, allostery, lever ARM, transcription, hormone; HET: DNA; 1.61A {Rattus norvegicus} SCOP: g.39.1.2 PDB: 3g6p_A* 3g6q_B* 3g6r_B* 3g6u_A* 3g8u_A* 3g8x_A* 3g97_B* 3g99_A* 3g9i_A* 3g9j_A* 3fyl_A* 3g9o_B* 3g9p_B* 3g6t_A* 1r4o_A 1r4r_A 1glu_A* 1gdc_A 2gda_A 1rgd_A ...
Probab=20.58 E-value=13 Score=26.83 Aligned_cols=19 Identities=37% Similarity=0.875 Sum_probs=13.6
Q ss_pred ccccccCCC------CceeccCCCC
Q 045528 156 HFCTVCGFS------ANYTCVKCGM 174 (195)
Q Consensus 156 ~fC~VCG~~------~~YtC~~Cg~ 174 (195)
++|.|||.. |.++|..|-.
T Consensus 3 ~~C~VCg~~a~g~hyGv~sC~~Ck~ 27 (90)
T 3g9m_A 3 HMCLVCSDEASGCHYGVLTCGSCKV 27 (90)
T ss_dssp CBCTTTCSBCCEEETTEEECHHHHH
T ss_pred CcCccCCCcCcccccCCccchhHhH
Confidence 489999973 3457888843
No 326
>1u6p_A GAG polyprotein; MLV, A-minor K-turn, stem loop, bulge, G-U mismatch, G-A MIS U mismatch, A-C mismatch, zinc finger, NC, viral protein-RN; HET: AP7; NMR {Moloney murine leukemia virus} SCOP: g.40.1.1 PDB: 1wwd_A 1wwe_A 1wwf_A 1wwg_A
Probab=20.56 E-value=55 Score=21.78 Aligned_cols=18 Identities=28% Similarity=0.713 Sum_probs=14.0
Q ss_pred CcccccccCCCCce--eccC
Q 045528 154 RRHFCTVCGFSANY--TCVK 171 (195)
Q Consensus 154 ~r~fC~VCG~~~~Y--tC~~ 171 (195)
...-|-.||..|.| .|++
T Consensus 22 ~~~~C~~Cge~GH~ardCp~ 41 (56)
T 1u6p_A 22 DRDQCAYCKEKGHWAKDCPK 41 (56)
T ss_dssp CTTBCSSSCCBSSCGGGCTT
T ss_pred CCCcceeCCCCCcccccCcC
Confidence 34589999998877 7775
No 327
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A 1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A 1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Probab=20.51 E-value=37 Score=31.80 Aligned_cols=33 Identities=9% Similarity=-0.038 Sum_probs=21.6
Q ss_pred CCcccccccCCC-CceeccCC---------CC--cccChhhhhhh
Q 045528 153 SRRHFCTVCGFS-ANYTCVKC---------GM--RFCCIRCQNIH 185 (195)
Q Consensus 153 P~r~fC~VCG~~-~~YtC~~C---------g~--ryCS~~C~~~H 185 (195)
|..++|.|||.+ -..+++.- |. .|||-.|..+-
T Consensus 399 ~~p~~c~vC~~p~~~~~~~~~~~~~~~~y~G~~y~FCs~~Ck~~F 443 (512)
T 1mty_D 399 HPIYIDRVSQVPFCPSLAKGASTLRVHEYNGEMHTFSDQWGERMW 443 (512)
T ss_dssp CCCEECTTTCCEECTTTCSSCCCCEEEEETTEEEEESSHHHHHHH
T ss_pred CCCeeCCCCCCcccccCCCCCCceeEEEECCEEEEecCHHHHHHH
Confidence 344699999997 45554433 22 35999997653
No 328
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.03 E-value=43 Score=21.25 Aligned_cols=22 Identities=32% Similarity=0.658 Sum_probs=17.7
Q ss_pred ceeccCCCCcccChhhhhhhcc
Q 045528 166 NYTCVKCGMRFCCIRCQNIHDD 187 (195)
Q Consensus 166 ~YtC~~Cg~ryCS~~C~~~H~E 187 (195)
.|.|..||..|-...-+..|..
T Consensus 47 ~~~C~~C~~~f~~~~~L~~H~~ 68 (86)
T 1x6h_A 47 AFVCSKCGKTFTRRNTMARHAD 68 (86)
T ss_dssp CEECSSSCCEESCHHHHHHHHH
T ss_pred ceECCCCCChhCCHHHHHHHHH
Confidence 4788888998888888877764
Done!