Query 045530
Match_columns 314
No_of_seqs 185 out of 1270
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 03:01:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045530.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045530hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 3E-109 5E-114 786.0 23.5 307 7-314 16-324 (324)
2 cd00693 secretory_peroxidase H 100.0 3E-101 6E-106 728.7 24.6 294 15-313 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 8.5E-73 1.8E-77 517.7 9.5 227 32-273 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 1.1E-70 2.4E-75 515.2 21.3 231 30-311 15-257 (289)
5 PLN02364 L-ascorbate peroxidas 100.0 1.7E-66 3.6E-71 480.1 19.9 231 18-299 3-248 (250)
6 cd00691 ascorbate_peroxidase A 100.0 1.6E-66 3.5E-71 481.6 19.7 223 27-299 11-251 (253)
7 cd00692 ligninase Ligninase an 100.0 6.5E-65 1.4E-69 484.0 20.8 236 28-314 16-287 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 8.7E-65 1.9E-69 468.1 20.2 220 29-299 17-248 (251)
9 cd00314 plant_peroxidase_like 100.0 2.4E-59 5.3E-64 434.3 18.1 221 31-295 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 4.6E-57 1E-61 436.8 18.6 256 30-304 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 1.5E-54 3.2E-59 443.0 19.1 252 30-300 55-404 (716)
12 cd08201 plant_peroxidase_like_ 100.0 8.9E-52 1.9E-56 381.6 12.0 232 16-295 14-264 (264)
13 PRK15061 catalase/hydroperoxid 100.0 6.2E-51 1.3E-55 414.4 18.7 254 30-302 57-412 (726)
14 cd08200 catalase_peroxidase_2 100.0 4.9E-41 1.1E-45 313.8 16.8 218 34-297 17-296 (297)
15 PRK15061 catalase/hydroperoxid 100.0 4.1E-35 8.8E-40 299.0 17.5 219 34-298 442-722 (726)
16 TIGR00198 cat_per_HPI catalase 100.0 3E-35 6.5E-40 301.4 16.5 221 31-298 429-710 (716)
17 COG0376 KatG Catalase (peroxid 100.0 4.4E-31 9.5E-36 259.0 16.2 246 31-295 71-414 (730)
18 COG0376 KatG Catalase (peroxid 99.5 5.3E-14 1.1E-18 139.4 12.8 216 34-297 452-725 (730)
19 PTZ00411 transaldolase-like pr 65.6 41 0.00089 32.9 9.0 56 122-177 180-250 (333)
20 PF11895 DUF3415: Domain of un 56.7 9.5 0.00021 29.6 2.3 19 281-299 2-20 (80)
21 TIGR00874 talAB transaldolase. 44.4 1.5E+02 0.0032 28.9 8.9 49 120-168 166-219 (317)
22 PRK12346 transaldolase A; Prov 30.9 35 0.00076 33.1 2.3 64 104-167 149-219 (316)
23 PRK12309 transaldolase/EF-hand 29.7 46 0.001 33.2 2.9 63 105-167 155-224 (391)
24 PLN02438 inositol-3-phosphate 25.3 5.2E+02 0.011 26.9 9.5 103 61-173 220-335 (510)
25 PF14919 MTBP_mid: MDM2-bindin 24.4 76 0.0017 31.0 3.2 69 77-173 265-333 (342)
26 cd00957 Transaldolase_TalAB Tr 23.4 63 0.0014 31.3 2.5 67 104-170 148-221 (313)
27 PLN00017 photosystem I reactio 21.3 68 0.0015 25.2 1.8 15 280-294 43-57 (90)
28 KOG0400 40S ribosomal protein 20.7 47 0.001 28.3 0.9 33 151-183 31-64 (151)
29 COG3652 Predicted outer membra 20.0 93 0.002 27.4 2.6 46 233-293 109-154 (170)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=2.5e-109 Score=785.97 Aligned_cols=307 Identities=66% Similarity=1.137 Sum_probs=287.5
Q ss_pred hhhhcccCCCCcccccCCChhHHHHHHHHHHHHHhcCCCchhhHHHHHhhccCCCCCCceeeccCCcccccCCCCCCCch
Q 045530 7 ATSVQSQGGLKAGFYSSSCPGAEAIVRSTVESHFKKDPTVAAGLLRLHFHDCFVQGCDGSVLIAGSSAERSALPNLGLRG 86 (314)
Q Consensus 7 ~~~~~~~~~l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~E~~~~~N~~l~g 86 (314)
++.+.+.++|+++||++|||++|+||+++|++++.++|+++|++|||+||||||+||||||||+++..||++++|.+|+|
T Consensus 16 ~~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~~Ek~a~~N~~l~G 95 (324)
T PLN03030 16 ATTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSNTEKTALPNLLLRG 95 (324)
T ss_pred hcccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCcccccCCCCcCcch
Confidence 33345567899999999999999999999999999999999999999999999999999999997668999999999999
Q ss_pred hhHHHHHHHHHHhcCCCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHCCC
Q 045530 87 FEVIDDAKTQLEASCPGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSSSQ-GLNLPSPLDSVTVQRQKFAAKGL 165 (314)
Q Consensus 87 f~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~-~~~lP~p~~~~~~l~~~F~~~Gl 165 (314)
|++|+.||+++|++||++|||||||++||||||+++|||.|+|++||||+++|.+. +.+||.|+.++++|++.|+++||
T Consensus 96 f~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~Gl 175 (324)
T PLN03030 96 YDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGL 175 (324)
T ss_pred HHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999998777 57899999999999999999999
Q ss_pred CccchhhhhcccccccccccccccccccCCCCC-CCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccchhHhhhh
Q 045530 166 DDHDLVTLVGAHTIGQTDCQFFRYRLYNFTTTG-NADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDVSFFKNV 244 (314)
Q Consensus 166 ~~~elVaLsGaHTiG~ahc~~f~~Rl~~f~g~~-~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l 244 (314)
+.+|||+||||||||++||.+|.+|||||++++ .+||+||+.|+..|+..||..++....+++|+.||.+|||+||+||
T Consensus 176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nl 255 (324)
T PLN03030 176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNL 255 (324)
T ss_pred CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHH
Confidence 999999999999999999999999999999875 5899999999999999999643333468899999999999999999
Q ss_pred cCCcccccchhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhhcCCCcCCCCCcccccCccCC
Q 045530 245 RDGKGVLESDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMSSIEVKTGSDGEIRKICSKFN 314 (314)
Q Consensus 245 ~~~~gll~SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 314 (314)
+.++|+|+|||+|++|++|+++|++||.|+ +..++.|+++|++||+|||+|+|+||.+|||||+|+++|
T Consensus 256 l~~rGlL~SDq~L~~d~~T~~~V~~~A~~~-~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 256 KNGRGILESDQKLWTDASTRTFVQRFLGVR-GLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HhcCCCcCCchHhhcCccHHHHHHHHhccc-ccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 999999999999999999999999999875 001159999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.8e-101 Score=728.74 Aligned_cols=294 Identities=57% Similarity=0.915 Sum_probs=284.0
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHhcCCCchhhHHHHHhhccCCCCCCceeeccCCc---ccccCCCCCCCchhhHHH
Q 045530 15 GLKAGFYSSSCPGAEAIVRSTVESHFKKDPTVAAGLLRLHFHDCFVQGCDGSVLIAGSS---AERSALPNLGLRGFEVID 91 (314)
Q Consensus 15 ~l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~---~E~~~~~N~~l~gf~~I~ 91 (314)
||+++||+++||++|+||+++|++.+.++++++|++|||+||||||+||||||||+++. +|+++++|.+|+||++|+
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l~g~~~i~ 80 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSLRGFDVID 80 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCcchhHHHH
Confidence 69999999999999999999999999999999999999999999999999999998752 899999999999999999
Q ss_pred HHHHHHHhcCCCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHCCCCccch
Q 045530 92 DAKTQLEASCPGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSSSQ-GLNLPSPLDSVTVQRQKFAAKGLDDHDL 170 (314)
Q Consensus 92 ~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~-~~~lP~p~~~~~~l~~~F~~~Gl~~~el 170 (314)
.||+++|++||++|||||||+||||+||+++|||.|+|++||+|++.|.+. +++||.|+.+++++++.|+++||+++||
T Consensus 81 ~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~G~~~~d~ 160 (298)
T cd00693 81 DIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDL 160 (298)
T ss_pred HHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccccCCCCcccCHHHHHHHHHHcCCCHHHh
Confidence 999999999999999999999999999999999999999999999988776 4789999999999999999999999999
Q ss_pred hhhhcccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccchhHhhhhcCCccc
Q 045530 171 VTLVGAHTIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDVSFFKNVRDGKGV 250 (314)
Q Consensus 171 VaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~gl 250 (314)
|||+||||||++||.+|.+|||||+|++.+||+||+.|+..|++.||..++.+..+++|+.||.+|||+||++|+.++|+
T Consensus 161 VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~~gl 240 (298)
T cd00693 161 VALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGRGL 240 (298)
T ss_pred eeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhcccC
Confidence 99999999999999999999999999999999999999999999999755455678999999999999999999999999
Q ss_pred ccchhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhhcCCCcCCCCCcccccCccC
Q 045530 251 LESDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMSSIEVKTGSDGEIRKICSKF 313 (314)
Q Consensus 251 l~SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 313 (314)
|+|||+|+.|++|+++|++||.|| +.|+++|++||+||++|+|+||.+||||++|+++
T Consensus 241 L~SD~~L~~d~~t~~~V~~~A~d~-----~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 241 LTSDQALLSDPRTRAIVNRYAANQ-----DAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred ccCCHHhccCccHHHHHHHHhhCH-----HHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 999999999999999999999999 9999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=8.5e-73 Score=517.74 Aligned_cols=227 Identities=57% Similarity=0.955 Sum_probs=208.5
Q ss_pred HHHHHHHHHhcCCCchhhHHHHHhhccCC-CCCCceeeccCCcccccCCCCCCCc-hhhHHHHHHHHHHhcCCCCCcHHH
Q 045530 32 VRSTVESHFKKDPTVAAGLLRLHFHDCFV-QGCDGSVLIAGSSAERSALPNLGLR-GFEVIDDAKTQLEASCPGVVSCAD 109 (314)
Q Consensus 32 V~~~v~~~~~~~~~~a~~llRl~FHDc~v-~GcDgSill~~~~~E~~~~~N~~l~-gf~~I~~iK~~le~~cp~~VScAD 109 (314)
||+.|++.++++++++|+||||+|||||+ +|||||||+.. .|+++++|.+|+ ++++|+.||+++|++||++|||||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~~--~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS~AD 78 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLFS--AEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVSCAD 78 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGST--TGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-HHH
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceeccc--cccccccccCcceeeechhhHHhhhcccccCCCCHHH
Confidence 79999999999999999999999999999 99999999954 799999999998 999999999999999999999999
Q ss_pred HHHHhhhhhhhhcCCCcccccCCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHCCCCccchhhhhcccccccccccccc
Q 045530 110 ILALAARDSVDLSDGPSWQVPTGRRDGRVSSSQ-GLNLPSPLDSVTVQRQKFAAKGLDDHDLVTLVGAHTIGQTDCQFFR 188 (314)
Q Consensus 110 ilalAar~av~~~GGP~~~v~~GR~D~~~s~~~-~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGaHTiG~ahc~~f~ 188 (314)
||+|||++||+.+|||.|+|++||+|++++.+. +.+||.|+.++++|++.|+++|||++|||||+||||||++||.+|.
T Consensus 79 iialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c~~f~ 158 (230)
T PF00141_consen 79 IIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGASNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHCSSFS 158 (230)
T ss_dssp HHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHHHHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESGGCTG
T ss_pred HHHHHhhhcccccccccccccccccccccccccccccccccccccchhhhhhhccccchhhhcceecccccccceecccc
Confidence 999999999999999999999999999999887 3469999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccchhHhhhhcCCcccccchhhhccCcchHHHHH
Q 045530 189 YRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDVSFFKNVRDGKGVLESDQRLWEDAATRNIVQ 268 (314)
Q Consensus 189 ~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~gll~SD~~L~~d~~t~~~V~ 268 (314)
||| + .+||+||+.|+.. .| ..++.+ .+++| ||.+|||+||++++.++|+|.||++|+.|++|+++|+
T Consensus 159 -rl~-~----~~dp~~d~~~~~~---~C-~~~~~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~V~ 225 (230)
T PF00141_consen 159 -RLY-F----PPDPTMDPGYAGQ---NC-NSGGDN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPIVE 225 (230)
T ss_dssp -GTS-C----SSGTTSTHHHHHH---SS-STSGCT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHHHH
T ss_pred -ccc-c----cccccccccccee---cc-CCCccc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHHHH
Confidence 999 5 5799999999988 99 333233 78888 9999999999999999999999999999999999999
Q ss_pred HHhhC
Q 045530 269 NYAGT 273 (314)
Q Consensus 269 ~yA~d 273 (314)
+||+|
T Consensus 226 ~yA~d 230 (230)
T PF00141_consen 226 RYAQD 230 (230)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 99986
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.1e-70 Score=515.25 Aligned_cols=231 Identities=28% Similarity=0.403 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHhcCCCchhhHHHHHhhccC-------CCCCCceeeccCCcccccCCCCCCC-chhhHHHHHHHHHHhcC
Q 045530 30 AIVRSTVESHFKKDPTVAAGLLRLHFHDCF-------VQGCDGSVLIAGSSAERSALPNLGL-RGFEVIDDAKTQLEASC 101 (314)
Q Consensus 30 ~iV~~~v~~~~~~~~~~a~~llRl~FHDc~-------v~GcDgSill~~~~~E~~~~~N~~l-~gf~~I~~iK~~le~~c 101 (314)
+.+++++ ..+.++|.++|.+|||+||||| ++||||||+++ .|+++++|.+| ++|++|+.||+++
T Consensus 15 ~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~---~E~~~~~N~gL~~g~~vid~iK~~~---- 86 (289)
T PLN02608 15 EKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE---EEYSHGANNGLKIAIDLCEPVKAKH---- 86 (289)
T ss_pred HHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc---cccCCccccchHHHHHHHHHHHHHc----
Confidence 3566666 4477899999999999999999 89999999996 59999999999 5999999999987
Q ss_pred CCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCccchhhhhccccccc
Q 045530 102 PGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSSSQGLNLPSPLDSVTVQRQKFAAKGLDDHDLVTLVGAHTIGQ 181 (314)
Q Consensus 102 p~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGaHTiG~ 181 (314)
++|||||||+||||+||+.+|||.|+|++||+|++++.+. ++||+|+.+++++++.|+++||+++|||+|+||||||+
T Consensus 87 -~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~-~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGAHTiG~ 164 (289)
T PLN02608 87 -PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPEE-GRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGGHTLGR 164 (289)
T ss_pred -CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCcc-CCCcCCCCCHHHHHHHHHHcCCCHHHHhhhcccccccc
Confidence 3899999999999999999999999999999999998766 78999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccchhHhhhhcCC--ccc--ccchhhh
Q 045530 182 TDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDVSFFKNVRDG--KGV--LESDQRL 257 (314)
Q Consensus 182 ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~--~gl--l~SD~~L 257 (314)
+||. |+ +|.| | | ..||.+|||+||++++.+ +|+ |+||++|
T Consensus 165 ahc~----r~-g~~g--------------------~----~-------~~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L 208 (289)
T PLN02608 165 AHPE----RS-GFDG--------------------P----W-------TKEPLKFDNSYFVELLKGESEGLLKLPTDKAL 208 (289)
T ss_pred cccc----CC-CCCC--------------------C----C-------CCCCCccChHHHHHHHcCCcCCccccccCHhh
Confidence 9994 54 3322 0 1 268999999999999999 788 7999999
Q ss_pred ccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhhcCCCcCCCCCcccccCc
Q 045530 258 WEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMSSIEVKTGSDGEIRKICS 311 (314)
Q Consensus 258 ~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 311 (314)
+.|++|+++|++||.|+ +.|+++|++||+||++|+|+||.+||+.+.-+
T Consensus 209 ~~d~~T~~~V~~fA~~~-----~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 209 LEDPEFRPYVELYAKDE-----DAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred hcChhHHHHHHHHhhCH-----HHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 99999999999999999 99999999999999999999999999988653
No 5
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=1.7e-66 Score=480.13 Aligned_cols=231 Identities=29% Similarity=0.443 Sum_probs=209.8
Q ss_pred cccccCC--ChhHHHHHHHHHHHHHhcCCCchhhHHHHHhh-----ccCCC--CCCceeeccCCcccccCCCCCCC-chh
Q 045530 18 AGFYSSS--CPGAEAIVRSTVESHFKKDPTVAAGLLRLHFH-----DCFVQ--GCDGSVLIAGSSAERSALPNLGL-RGF 87 (314)
Q Consensus 18 ~~fY~~s--CP~~e~iV~~~v~~~~~~~~~~a~~llRl~FH-----Dc~v~--GcDgSill~~~~~E~~~~~N~~l-~gf 87 (314)
.+||... ||++++.++..+++.+ .+++++|.||||+|| ||+++ ||||||.++ +|+++++|.+| ++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~---~E~~~~~N~gl~~~~ 78 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFD---AEQAHGANSGIHIAL 78 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCcccccc---ccccCCCccCHHHHH
Confidence 3567644 8999999999999988 788999999999999 88876 999999876 59999999999 799
Q ss_pred hHHHHHHHHHHhcCCCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-CCCC
Q 045530 88 EVIDDAKTQLEASCPGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSSSQGLNLPSPLDSVTVQRQKFAA-KGLD 166 (314)
Q Consensus 88 ~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~lP~p~~~~~~l~~~F~~-~Gl~ 166 (314)
++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+. ++||.|+.++++|++.|++ +|||
T Consensus 79 ~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~-~~lP~p~~~~~~l~~~F~~~~Gl~ 152 (250)
T PLN02364 79 RLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPE-GRLPDATKGCDHLRDVFAKQMGLS 152 (250)
T ss_pred HHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCccccccc-CCCCCCCcCHHHHHHHHHHhcCCC
Confidence 9999999998 4899999999999999999999999999999999998876 7899999999999999996 6999
Q ss_pred ccchhhhhcccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccchhHhhhhcC
Q 045530 167 DHDLVTLVGAHTIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDVSFFKNVRD 246 (314)
Q Consensus 167 ~~elVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~ 246 (314)
++|||||+||||||++|| .|+ +|.|. + ..||.+|||+||++|+.
T Consensus 153 ~~d~VaLsGaHTiG~~hc----~r~-~~~g~------------------------~-------~~tp~~fDn~Yy~~ll~ 196 (250)
T PLN02364 153 DKDIVALSGAHTLGRCHK----DRS-GFEGA------------------------W-------TSNPLIFDNSYFKELLS 196 (250)
T ss_pred HHHheeeecceeeccccC----CCC-CCCCC------------------------C-------CCCCCccchHHHHHHhc
Confidence 999999999999999999 454 33220 1 26899999999999999
Q ss_pred C--ccccc--chhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhhcCCCc
Q 045530 247 G--KGVLE--SDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMSSIEVK 299 (314)
Q Consensus 247 ~--~gll~--SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~~lgv~ 299 (314)
+ +|+|. ||++|+.|++|+.+|+.||.|+ +.|+++|++||+||++|++.
T Consensus 197 ~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~-----~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 197 GEKEGLLQLVSDKALLDDPVFRPLVEKYAADE-----DAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred CCcCCCccccchHHHccCchHHHHHHHHhhCH-----HHHHHHHHHHHHHHHccCCC
Confidence 9 89865 9999999999999999999999 99999999999999999974
No 6
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.6e-66 Score=481.60 Aligned_cols=223 Identities=26% Similarity=0.369 Sum_probs=202.5
Q ss_pred hHHHHHHHHHHHHHhcCCCchhhHHHHHhhccCC-------CCCCceeeccCCcccccCCCCCCC-chhhHHHHHHHHHH
Q 045530 27 GAEAIVRSTVESHFKKDPTVAAGLLRLHFHDCFV-------QGCDGSVLIAGSSAERSALPNLGL-RGFEVIDDAKTQLE 98 (314)
Q Consensus 27 ~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgSill~~~~~E~~~~~N~~l-~gf~~I~~iK~~le 98 (314)
..++||+++|++.++ +|+++|++|||+|||||+ +||||++.+. +|+++++|.+| ++|++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~~d~s~~~~G~d~s~~~~---~E~~~~~N~~L~~~~~~i~~iK~~~- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFD---PELNHGANAGLDIARKLLEPIKKKY- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhccccccCCCCCCccccch---hhcCCccccchHHHHHHHHHHHHHc-
Confidence 567899999999999 999999999999999984 3445555443 59999999999 8999999999987
Q ss_pred hcCCCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCCCC-C-CCCCCCCCCHHHHHHHHHHCCCCccchhhhhcc
Q 045530 99 ASCPGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSSSQ-G-LNLPSPLDSVTVQRQKFAAKGLDDHDLVTLVGA 176 (314)
Q Consensus 99 ~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~-~-~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGa 176 (314)
| +|||||||+||||+||+.+|||.|+|++||+|+.++... + .+||.|+.++++|++.|+++||+++|||+|+||
T Consensus 86 ---~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGa 161 (253)
T cd00691 86 ---P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGA 161 (253)
T ss_pred ---C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhccc
Confidence 4 899999999999999999999999999999999999866 5 789999999999999999999999999999999
Q ss_pred cccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccchhHhhhhcCCcc-------
Q 045530 177 HTIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDVSFFKNVRDGKG------- 249 (314)
Q Consensus 177 HTiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~g------- 249 (314)
||||++||.. ++|.|. + ..||.+|||+||++|+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g~------------------------~-------~~tp~~FDn~Yy~~ll~~~g~~~~~~~ 205 (253)
T cd00691 162 HTLGRCHKER-----SGYDGP------------------------W-------TKNPLKFDNSYFKELLEEDWKLPTPGL 205 (253)
T ss_pred ceeecccccC-----CCCCCC------------------------C-------CCCCCcccHHHHHHHhcCCCccCcCcc
Confidence 9999999953 233221 1 25899999999999999999
Q ss_pred -cccchhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhhcCCCc
Q 045530 250 -VLESDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMSSIEVK 299 (314)
Q Consensus 250 -ll~SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~~lgv~ 299 (314)
+|+||++|+.|++|+++|+.||.|+ ++|+++|++||+||++|+|.
T Consensus 206 ~~L~sD~~L~~d~~t~~~v~~~a~~~-----~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 206 LMLPTDKALLEDPKFRPYVELYAKDQ-----DAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred eechhhHHHHcCccHHHHHHHHhhCH-----HHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999 99999999999999999986
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=6.5e-65 Score=484.01 Aligned_cols=236 Identities=27% Similarity=0.404 Sum_probs=213.6
Q ss_pred HHHHHHHHHHHHHhcC---CCchhhHHHHHhhccCC------------CCCCceeeccCCcccccCCCCCCCchhhHHHH
Q 045530 28 AEAIVRSTVESHFKKD---PTVAAGLLRLHFHDCFV------------QGCDGSVLIAGSSAERSALPNLGLRGFEVIDD 92 (314)
Q Consensus 28 ~e~iV~~~v~~~~~~~---~~~a~~llRl~FHDc~v------------~GcDgSill~~~~~E~~~~~N~~l~gf~~I~~ 92 (314)
+|..|++.|++.+..+ ...|+.+|||+||||++ +|||||||++++ .|+++++|.||+ ++|+.
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~-~E~~~~~N~gL~--~vvd~ 92 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD-IETAFHANIGLD--EIVEA 92 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc-ccccCCCCCCHH--HHHHH
Confidence 5779999999999744 45777899999999996 899999999854 699999999998 89999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHhhhhhhhh-cCCCcccccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCccchh
Q 045530 93 AKTQLEASCPGVVSCADILALAARDSVDL-SDGPSWQVPTGRRDGRVSSSQGLNLPSPLDSVTVQRQKFAAKGLDDHDLV 171 (314)
Q Consensus 93 iK~~le~~cp~~VScADilalAar~av~~-~GGP~~~v~~GR~D~~~s~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elV 171 (314)
||..+|+.| |||||||+||||+||+. .|||.|+|++||+|++.+.+. ++||.|+.++++|++.|+++||+.+|||
T Consensus 93 lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~-g~LP~p~~sv~~l~~~F~~~Gf~~~E~V 168 (328)
T cd00692 93 LRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPD-GLVPEPFDSVDKILARFADAGFSPDELV 168 (328)
T ss_pred HHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcc-cCCCCCCCCHHHHHHHHHHcCCCHHHHh
Confidence 999999998 99999999999999995 599999999999999998877 7899999999999999999999999999
Q ss_pred hhhcccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccchhHhhhhc-CCcc-
Q 045530 172 TLVGAHTIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDVSFFKNVR-DGKG- 249 (314)
Q Consensus 172 aLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~-~~~g- 249 (314)
+|+||||||++|. +||+++ ..++| .||.+|||+||+|++ .+++
T Consensus 169 aLsGAHTiG~a~~---------------~Dps~~-------------------g~p~D-~TP~~FDn~Yf~~ll~~~~~~ 213 (328)
T cd00692 169 ALLAAHSVAAQDF---------------VDPSIA-------------------GTPFD-STPGVFDTQFFIETLLKGTAF 213 (328)
T ss_pred hhcccccccccCC---------------CCCCCC-------------------CCCCC-CCcchhcHHHHHHHHHcCCCC
Confidence 9999999999982 477764 14577 699999999999987 5555
Q ss_pred ------------------cccchhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhhcCCCcCCCCCcccccCc
Q 045530 250 ------------------VLESDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMSSIEVKTGSDGEIRKICS 311 (314)
Q Consensus 250 ------------------ll~SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 311 (314)
+|+||++|+.|++|+.+|++||.|| ++|+++|++||+||++|||. ...+.+|+
T Consensus 214 ~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq-----~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs 284 (328)
T cd00692 214 PGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQ-----AKMNAAFAAAMLKLSLLGQD----NISLTDCS 284 (328)
T ss_pred CCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCH-----HHHHHHHHHHHHHHHcCCCC----cchhccCc
Confidence 4999999999999999999999999 99999999999999999986 44788999
Q ss_pred cCC
Q 045530 312 KFN 314 (314)
Q Consensus 312 ~~n 314 (314)
.|+
T Consensus 285 ~v~ 287 (328)
T cd00692 285 DVI 287 (328)
T ss_pred ccC
Confidence 875
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=8.7e-65 Score=468.09 Aligned_cols=220 Identities=27% Similarity=0.403 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHhcCCCchhhHHHHHhhccCC-------CCCCceeeccCCcccccCCCCCCCc-hhhHHHHHHHHHHhc
Q 045530 29 EAIVRSTVESHFKKDPTVAAGLLRLHFHDCFV-------QGCDGSVLIAGSSAERSALPNLGLR-GFEVIDDAKTQLEAS 100 (314)
Q Consensus 29 e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgSill~~~~~E~~~~~N~~l~-gf~~I~~iK~~le~~ 100 (314)
.+-++..+.+.+ .+...+|.+|||+||||.+ |||||||++. .|+++++|.||+ ++++|+.||+++
T Consensus 17 ~~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~---~E~~~~~N~gL~~~~~~i~~iK~~~--- 89 (251)
T PLN02879 17 VQRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP---QELAHDANNGLDIAVRLLDPIKELF--- 89 (251)
T ss_pred HHHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh---hhccCCCcCChHHHHHHHHHHHHHc---
Confidence 344677777776 4569999999999999973 8999999986 599999999998 999999999998
Q ss_pred CCCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCccchhhhhcccccc
Q 045530 101 CPGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSSSQGLNLPSPLDSVTVQRQKFAAKGLDDHDLVTLVGAHTIG 180 (314)
Q Consensus 101 cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGaHTiG 180 (314)
++|||||||+||||+||+.+|||.|+|++||+|+..+.+. ++||.|+.++++|++.|+++||+++|||||+||||||
T Consensus 90 --~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~-~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsGaHTiG 166 (251)
T PLN02879 90 --PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPE-GRLPQATKGVDHLRDVFGRMGLNDKDIVALSGGHTLG 166 (251)
T ss_pred --CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcc-cCCCCCCCCHHHHHHHHHHcCCCHHHHeeeecccccc
Confidence 4899999999999999999999999999999999998776 8899999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccchhHhhhhcCC--ccc--ccchhh
Q 045530 181 QTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDVSFFKNVRDG--KGV--LESDQR 256 (314)
Q Consensus 181 ~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~--~gl--l~SD~~ 256 (314)
++||. | ++|.|. +| .||.+|||+||++|+.+ +|+ |+||++
T Consensus 167 ~ah~~----r-~g~~g~------------------------------~d-~tp~~FDN~Yy~~ll~~~~~gll~L~SD~a 210 (251)
T PLN02879 167 RCHKE----R-SGFEGA------------------------------WT-PNPLIFDNSYFKEILSGEKEGLLQLPTDKA 210 (251)
T ss_pred ccccc----c-ccCCCC------------------------------CC-CCccceeHHHHHHHHcCCcCCCccchhhHH
Confidence 99994 3 333221 22 68999999999999999 888 679999
Q ss_pred hccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhhcCCCc
Q 045530 257 LWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMSSIEVK 299 (314)
Q Consensus 257 L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~~lgv~ 299 (314)
|+.|++|+++|++||.|| ++||++|++||+||++||+.
T Consensus 211 L~~D~~t~~~V~~~A~d~-----~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 211 LLDDPLFLPFVEKYAADE-----DAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred HhcCCcHHHHHHHHhhCH-----HHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999 99999999999999999985
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=2.4e-59 Score=434.28 Aligned_cols=221 Identities=33% Similarity=0.474 Sum_probs=205.0
Q ss_pred HHHHHHHHHHhcCCCchhhHHHHHhhccCCC--------CCCceeeccCCcccccCCCCCCC-chhhHHHHHHHHHHhcC
Q 045530 31 IVRSTVESHFKKDPTVAAGLLRLHFHDCFVQ--------GCDGSVLIAGSSAERSALPNLGL-RGFEVIDDAKTQLEASC 101 (314)
Q Consensus 31 iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~--------GcDgSill~~~~~E~~~~~N~~l-~gf~~I~~iK~~le~~c 101 (314)
.|++.|++.+.+++.+++++|||+||||++. ||||||++++ |+++++|.+| +++++|+.||.++|.
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~---e~~~~~N~~l~~~~~~l~~ik~~~~~-- 76 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP---ELDRPENGGLDKALRALEPIKSAYDG-- 76 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc---cccCcccccHHHHHHHHHHHHHHcCC--
Confidence 5788999999999999999999999999985 9999999984 9999999996 899999999999998
Q ss_pred CCCCcHHHHHHHhhhhhhhhc--CCCcccccCCCCCCCCCC---CCC-CCCCCCCCCHHHHHHHHHHCCCCccchhhhh-
Q 045530 102 PGVVSCADILALAARDSVDLS--DGPSWQVPTGRRDGRVSS---SQG-LNLPSPLDSVTVQRQKFAAKGLDDHDLVTLV- 174 (314)
Q Consensus 102 p~~VScADilalAar~av~~~--GGP~~~v~~GR~D~~~s~---~~~-~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs- 174 (314)
|++|||||||++|+++||+.+ |||.|+|++||+|++.+. +.+ .++|.|..+++++++.|.++||+++|||||+
T Consensus 77 ~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VAL~~ 156 (255)
T cd00314 77 GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVALSA 156 (255)
T ss_pred CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHhhcc
Confidence 899999999999999999999 999999999999999663 223 7789999999999999999999999999999
Q ss_pred ccccc-ccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccchhHhhhhcCCc-----
Q 045530 175 GAHTI-GQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDVSFFKNVRDGK----- 248 (314)
Q Consensus 175 GaHTi-G~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~----- 248 (314)
||||| |++||..|..|+ |+ +|+.||.+|||+||++++.++
T Consensus 157 GaHti~G~~~~~~~~~~~------------------------~~----------~~~~tp~~fDN~yy~~l~~~~~~~~~ 202 (255)
T cd00314 157 GAHTLGGKNHGDLLNYEG------------------------SG----------LWTSTPFTFDNAYFKNLLDMNWEWRV 202 (255)
T ss_pred CCeeccCcccCCCCCccc------------------------CC----------CCCCCCCccchHHHHHHhcCCccccc
Confidence 99999 999998887664 21 236899999999999999988
Q ss_pred -----------ccccchhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhhc
Q 045530 249 -----------GVLESDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMSS 295 (314)
Q Consensus 249 -----------gll~SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~~ 295 (314)
++|+||++|+.|++|+.+|++||.|+ +.|+++|++||+||++
T Consensus 203 ~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~-----~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 203 GSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQ-----EKFFEDFAKAWIKMVN 255 (255)
T ss_pred CCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCH-----HHHHHHHHHHHHHHcC
Confidence 89999999999999999999999999 9999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=4.6e-57 Score=436.82 Aligned_cols=256 Identities=20% Similarity=0.246 Sum_probs=228.3
Q ss_pred HHHHHHHHHHHhcC--------CCchhhHHHHHhhccCC-------CCCC-ceeeccCCcccccCCCCCCCc-hhhHHHH
Q 045530 30 AIVRSTVESHFKKD--------PTVAAGLLRLHFHDCFV-------QGCD-GSVLIAGSSAERSALPNLGLR-GFEVIDD 92 (314)
Q Consensus 30 ~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~E~~~~~N~~l~-gf~~I~~ 92 (314)
+.|++.|++.+... ...+|.+|||+||++.+ ||++ |+|++. .|++++.|.+|. ++.+++.
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~---pe~~~~~N~gL~~a~~~L~p 121 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA---PLNSWPDNVNLDKARRLLWP 121 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc---cccCcHhhhhHHHHHHHHHH
Confidence 67899999988764 37999999999999985 8997 799998 599999999995 8899999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCC--------------------------------
Q 045530 93 AKTQLEASCPGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSS-------------------------------- 140 (314)
Q Consensus 93 iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~-------------------------------- 140 (314)
||+++. ..||+||+|+||+..|||.+|||.|++.+||.|...+.
T Consensus 122 ik~k~~----~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a~~m 197 (409)
T cd00649 122 IKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAAVQM 197 (409)
T ss_pred HHHHcC----CCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhhhhc
Confidence 999884 46999999999999999999999999999999996543
Q ss_pred ------CC-CCCCCCCCCCHHHHHHHHHHCCCCccchhhh-hcccccccccccccccccccCCCCCCCCCCCCHHHHHHH
Q 045530 141 ------SQ-GLNLPSPLDSVTVQRQKFAAKGLDDHDLVTL-VGAHTIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQL 212 (314)
Q Consensus 141 ------~~-~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaL-sGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L 212 (314)
++ +..||+|..++.+|++.|++||||++||||| +||||||++||.+|.+||. +||++++.|++.|
T Consensus 198 gliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg-------~dP~~~~~~~~gL 270 (409)
T cd00649 198 GLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG-------PEPEAAPIEQQGL 270 (409)
T ss_pred cccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC-------CCCCcCHHHHHhh
Confidence 22 1379999999999999999999999999999 5999999999999999982 6999999999999
Q ss_pred h--hcCCCCC-CCCcccccc---CCCcCccchhHhhhhcC------------------------------------Cccc
Q 045530 213 Q--TLCPKDG-DGTKRVALD---IDSQNKFDVSFFKNVRD------------------------------------GKGV 250 (314)
Q Consensus 213 ~--~~Cp~~~-~~~~~~~~D---~~tp~~FDn~Yy~~l~~------------------------------------~~gl 250 (314)
+ ..||... +.+....+| +.||.+|||+||++|+. +.+|
T Consensus 271 gw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~gm 350 (409)
T cd00649 271 GWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPMM 350 (409)
T ss_pred cccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCccc
Confidence 5 8999642 233456788 58999999999999988 5689
Q ss_pred ccchhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHh--hcCCCcCCCCC
Q 045530 251 LESDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKM--SSIEVKTGSDG 304 (314)
Q Consensus 251 l~SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km--~~lgv~tg~~G 304 (314)
|+||++|+.|++++++|++||.|+ ++||++|++||+|| +.+|+++-.-|
T Consensus 351 L~SD~aL~~Dp~tr~iV~~yA~d~-----~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 351 LTTDLALRFDPEYEKISRRFLENP-----DEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred chhhHhhhcCccHHHHHHHHhcCH-----HHHHHHHHHHHHHHccccCCchhhhcC
Confidence 999999999999999999999999 99999999999999 69999986544
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.5e-54 Score=443.03 Aligned_cols=252 Identities=21% Similarity=0.232 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHhcC--------CCchhhHHHHHhhccCC-------CCCC-ceeeccCCcccccCCCCCCCc-hhhHHHH
Q 045530 30 AIVRSTVESHFKKD--------PTVAAGLLRLHFHDCFV-------QGCD-GSVLIAGSSAERSALPNLGLR-GFEVIDD 92 (314)
Q Consensus 30 ~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~E~~~~~N~~l~-gf~~I~~ 92 (314)
+.|++.|++.+... ...+|-+|||+||++.+ |||+ |+|+|. .|++++.|.+|. ++.+++.
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~---P~~sw~~N~~Ldka~~lL~p 131 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA---PLNSWPDNVNLDKARRLLWP 131 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc---cccCchhhhhHHHHHHHHHH
Confidence 46899999988864 37999999999999985 8985 799998 499999999994 8899999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCC--------------------------------
Q 045530 93 AKTQLEASCPGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSS-------------------------------- 140 (314)
Q Consensus 93 iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~-------------------------------- 140 (314)
||++ ||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 132 Ik~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~~~G 207 (716)
T TIGR00198 132 IKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAATEMG 207 (716)
T ss_pred HHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhhhcc
Confidence 9884 7889999999999999999999999999999999994321
Q ss_pred -----CC-CCCCCCCCCCHHHHHHHHHHCCCCccchhhhh-cccccccccccccccccccCCCCCCCCCCCCHHHHHHHh
Q 045530 141 -----SQ-GLNLPSPLDSVTVQRQKFAAKGLDDHDLVTLV-GAHTIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQ 213 (314)
Q Consensus 141 -----~~-~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs-GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~ 213 (314)
++ +..+|.|..++.+|++.|++||||++|||||+ ||||||++||.+|.+|| ++||++++.|++.|+
T Consensus 208 liyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl-------g~dP~~~~~~~~gLg 280 (716)
T TIGR00198 208 LIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI-------GPDPEGAPIEEQGLG 280 (716)
T ss_pred ccccCcccccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC-------CCCCCcCHHHHHHhc
Confidence 12 23699999999999999999999999999995 99999999999999998 279999999999999
Q ss_pred hcCCCCC---CCCcccccc---CCCcCccchhHhhhhcCC----------------------------------cccccc
Q 045530 214 TLCPKDG---DGTKRVALD---IDSQNKFDVSFFKNVRDG----------------------------------KGVLES 253 (314)
Q Consensus 214 ~~Cp~~~---~~~~~~~~D---~~tp~~FDn~Yy~~l~~~----------------------------------~gll~S 253 (314)
..||... ..+..+.+| +.||.+|||+||+||+.+ .++|+|
T Consensus 281 ~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~S 360 (716)
T TIGR00198 281 WHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLDA 360 (716)
T ss_pred ccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccch
Confidence 9998632 223356677 689999999999999975 689999
Q ss_pred hhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhh--cCCCcC
Q 045530 254 DQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMS--SIEVKT 300 (314)
Q Consensus 254 D~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~--~lgv~t 300 (314)
|++|..|++++++|++||.|+ ++|+++|++||+||+ .+|++.
T Consensus 361 DlaL~~Dp~~r~iVe~yA~d~-----~~F~~dFA~Aw~KL~~~d~gp~~ 404 (716)
T TIGR00198 361 DLALRFDPEFRKISRRFLREP-----DYFAEAFAKAWFKLTHRDMGPKS 404 (716)
T ss_pred hHHhccCccHHHHHHHHhcCH-----HHHHHHHHHHHHHHcccccCchh
Confidence 999999999999999999999 999999999999998 566654
No 12
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=8.9e-52 Score=381.56 Aligned_cols=232 Identities=22% Similarity=0.274 Sum_probs=188.3
Q ss_pred CCcccccCCChhHHHHHHHHHHHHHhcCCCchhhHHHHHhhccC-------CCCCCceeeccCCccccc-CCCCCCCchh
Q 045530 16 LKAGFYSSSCPGAEAIVRSTVESHFKKDPTVAAGLLRLHFHDCF-------VQGCDGSVLIAGSSAERS-ALPNLGLRGF 87 (314)
Q Consensus 16 l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~-------v~GcDgSill~~~~~E~~-~~~N~~l~gf 87 (314)
++.+||... +-+.|..+-......+++++++||||+||||| ++||||||+++...+|+. .+.|.+|++|
T Consensus 14 ~~~g~~~~~---f~~~v~~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~~~En~G~~~n~~l~~~ 90 (264)
T cd08201 14 LQSGYSARG---FVAGVTPCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELDRPENIGSGFNTTLNFF 90 (264)
T ss_pred hcccceecc---cccccccccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCCChhhccCchhhccccc
Confidence 345555532 22344455555666889999999999999999 899999999985557777 4556678888
Q ss_pred hHHHHHHHHHHhcCCCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCc
Q 045530 88 EVIDDAKTQLEASCPGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSSSQGLNLPSPLDSVTVQRQKFAAKGLDD 167 (314)
Q Consensus 88 ~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~lP~p~~~~~~l~~~F~~~Gl~~ 167 (314)
+.|+.+ +||||||||||||+||+.||||.|+|++||+|++.+.+. + ||.|+.++++|++.|++|||++
T Consensus 91 ~~i~~~----------~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~-g-lP~P~~~v~~l~~~Fa~~Gfs~ 158 (264)
T cd08201 91 VNFYSP----------RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA-G-VPEPQTDLGTTTESFRRQGFST 158 (264)
T ss_pred eeeccC----------ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc-c-CCCCccCHHHHHHHHHHcCCCh
Confidence 877543 699999999999999999999999999999999988876 4 9999999999999999999999
Q ss_pred cchhhhhc-ccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccchhHhhhhcC
Q 045530 168 HDLVTLVG-AHTIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDVSFFKNVRD 246 (314)
Q Consensus 168 ~elVaLsG-aHTiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~ 246 (314)
+|||+|+| |||||++||..|.+++ +|.. ..+...++| .||.+|||+||++++.
T Consensus 159 ~DmVaLsggaHTiG~ahc~~f~~~~---------~~g~----------------~~~~~~p~d-stp~~FDn~~f~E~l~ 212 (264)
T cd08201 159 SEMIALVACGHTLGGVHSEDFPEIV---------PPGS----------------VPDTVLQFF-DTTIQFDNKVVTEYLS 212 (264)
T ss_pred HHHheeecCCeeeeecccccchhhc---------CCcc----------------ccCCCCCCC-CCccccchHHHHHHhc
Confidence 99999995 9999999999987764 1100 001134566 7999999999999998
Q ss_pred Ccc----------cccchhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhhc
Q 045530 247 GKG----------VLESDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMSS 295 (314)
Q Consensus 247 ~~g----------ll~SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~~ 295 (314)
+.. .+.||..++....-. .++..| ++ +.|.+.++..+.||.+
T Consensus 213 g~~~~~L~~~~~~~~~sd~r~f~~d~n~-t~~~l~-~~-----~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 213 GTTNNPLVVGPNNTTNSDLRIFSSDGNV-TMNELA-SP-----DTFQKTCADILQRMID 264 (264)
T ss_pred CCCCCceeecCCCCccchhhheecCccH-HHHHhc-Ch-----HHHHHHHHHHHHHHhC
Confidence 742 368999999876554 467777 68 9999999999999974
No 13
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=6.2e-51 Score=414.44 Aligned_cols=254 Identities=19% Similarity=0.260 Sum_probs=223.2
Q ss_pred HHHHHHHHHHHhcC--------CCchhhHHHHHhhccCC-------CCCC-ceeeccCCcccccCCCCCCCc-hhhHHHH
Q 045530 30 AIVRSTVESHFKKD--------PTVAAGLLRLHFHDCFV-------QGCD-GSVLIAGSSAERSALPNLGLR-GFEVIDD 92 (314)
Q Consensus 30 ~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~E~~~~~N~~l~-gf~~I~~ 92 (314)
+.|++.|.+.+... ...+|.+|||+||++.+ |||+ |+|++. .|++++.|.+|. ++.+++.
T Consensus 57 ~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~---pe~~w~~N~gL~ka~~~L~p 133 (726)
T PRK15061 57 EALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA---PLNSWPDNVNLDKARRLLWP 133 (726)
T ss_pred HHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc---ccccchhhhhHHHHHHHHHH
Confidence 46899999988764 37999999999999985 8996 799998 499999999995 8899999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCCC-------------------------------
Q 045530 93 AKTQLEASCPGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSSS------------------------------- 141 (314)
Q Consensus 93 iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~------------------------------- 141 (314)
||+++. ..||+||+|+||+..|||.+|||.|++.+||.|...+..
T Consensus 134 ik~ky~----~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~a~~ 209 (726)
T PRK15061 134 IKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLAAVQ 209 (726)
T ss_pred HHHHhC----CCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccchhhhh
Confidence 999984 479999999999999999999999999999999864322
Q ss_pred --------C-CCCCCCCCCCHHHHHHHHHHCCCCccchhhhh-cccccccccccccccccccCCCCCCCCCCCCHHHHHH
Q 045530 142 --------Q-GLNLPSPLDSVTVQRQKFAAKGLDDHDLVTLV-GAHTIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQ 211 (314)
Q Consensus 142 --------~-~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs-GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~ 211 (314)
+ +..+|+|..++.+|++.|.+||||++|||||+ ||||||++||..|.+|| ++||++++.+++.
T Consensus 210 mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl-------gpdP~~a~~~~qg 282 (726)
T PRK15061 210 MGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV-------GPEPEAAPIEEQG 282 (726)
T ss_pred ccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc-------CCCCCcCHHHHHh
Confidence 2 12379999999999999999999999999995 99999999999999998 3799999999999
Q ss_pred Hh--hcCCCC-CCCCcccccc---CCCcCccchhHhhhhcCC------------------------------------cc
Q 045530 212 LQ--TLCPKD-GDGTKRVALD---IDSQNKFDVSFFKNVRDG------------------------------------KG 249 (314)
Q Consensus 212 L~--~~Cp~~-~~~~~~~~~D---~~tp~~FDn~Yy~~l~~~------------------------------------~g 249 (314)
|. ..||.. +.++.+..+| +.||.+|||+||++|+.+ .+
T Consensus 283 Lgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~~ 362 (726)
T PRK15061 283 LGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAPT 362 (726)
T ss_pred ccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccCcc
Confidence 85 889963 2233456677 689999999999999874 58
Q ss_pred cccchhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHh--hcCCCcCCC
Q 045530 250 VLESDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKM--SSIEVKTGS 302 (314)
Q Consensus 250 ll~SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km--~~lgv~tg~ 302 (314)
||+||++|..||.++++|++||.|+ ++|+++|++||.|| ..+|+++-.
T Consensus 363 MLtSD~AL~~DP~~r~iV~~fA~d~-----~~F~~~FA~A~~KL~hrdmgp~~ry 412 (726)
T PRK15061 363 MLTTDLALRFDPEYEKISRRFLENP-----EEFADAFARAWFKLTHRDMGPKSRY 412 (726)
T ss_pred cccccHHhhcCCcHHHHHHHHhcCH-----HHHHHHHHHHHHHHcccCCCchhhh
Confidence 9999999999999999999999999 99999999999999 447766543
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=4.9e-41 Score=313.79 Aligned_cols=218 Identities=17% Similarity=0.212 Sum_probs=181.8
Q ss_pred HHHHHHHhcCCCchhhHHHHHhhccCC-------CCCCce-eeccCCcccccCCCCCC--Cc-hhhHHHHHHHHHHhc-C
Q 045530 34 STVESHFKKDPTVAAGLLRLHFHDCFV-------QGCDGS-VLIAGSSAERSALPNLG--LR-GFEVIDDAKTQLEAS-C 101 (314)
Q Consensus 34 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~E~~~~~N~~--l~-gf~~I~~iK~~le~~-c 101 (314)
+.+++.+......++.+|||+||++.+ ||++|+ |+|. +|++++.|.+ |. .+.+++.||+++... -
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~---pe~~w~~N~~~~L~~~~~~Le~ik~~~~~~~~ 93 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA---PQKDWEVNEPEELAKVLAVLEGIQKEFNESQS 93 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc---cccCcCccCcHHHHHHHHHHHHHHHHhccccc
Confidence 677777788888999999999999985 899998 9998 5999999998 84 889999999998532 1
Q ss_pred C-CCCcHHHHHHHhhhhhhhhcCC-----CcccccCCCCCCCCCCCC-C---CCCCCCC------------CCHHHHHHH
Q 045530 102 P-GVVSCADILALAARDSVDLSDG-----PSWQVPTGRRDGRVSSSQ-G---LNLPSPL------------DSVTVQRQK 159 (314)
Q Consensus 102 p-~~VScADilalAar~av~~~GG-----P~~~v~~GR~D~~~s~~~-~---~~lP~p~------------~~~~~l~~~ 159 (314)
+ ..||+||+|+||+..|||.+|| |.|++.+||.|.+.+... . ..+|.+. .+.++|++.
T Consensus 94 ~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~Lrd~ 173 (297)
T cd08200 94 GGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEMLVDK 173 (297)
T ss_pred CCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHHHHH
Confidence 2 2699999999999999999999 999999999999876543 1 2345432 234789999
Q ss_pred HHHCCCCccchhhhhccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccch
Q 045530 160 FAAKGLDDHDLVTLVGAH-TIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDV 238 (314)
Q Consensus 160 F~~~Gl~~~elVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn 238 (314)
|.++|||++|||||+||| ++|+.|..++ .| .| +.+|.+|||
T Consensus 174 f~rlglsd~EmvaL~Gg~r~lG~~~~~s~-------~G------------------------~w-------T~~p~~f~N 215 (297)
T cd08200 174 AQLLTLTAPEMTVLVGGLRVLGANYGGSK-------HG------------------------VF-------TDRPGVLTN 215 (297)
T ss_pred HHhCCCChHHHhheecchhhcccCCCCCC-------CC------------------------CC-------cCCCCcccc
Confidence 999999999999999998 6998874221 01 12 468999999
Q ss_pred hHhhhhcCCc--------------------c-----cccchhhhccCcchHHHHHHHhhC--ccCchhHHHHHHHHHHHH
Q 045530 239 SFFKNVRDGK--------------------G-----VLESDQRLWEDAATRNIVQNYAGT--IRGLLGFRFDFEFPKAMI 291 (314)
Q Consensus 239 ~Yy~~l~~~~--------------------g-----ll~SD~~L~~d~~t~~~V~~yA~d--~~~~~~~~F~~~Fa~Am~ 291 (314)
.||+||++.. | .+.+|.+|.+|++.|++|+.||.| + ++||+||++||.
T Consensus 216 ~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~-----~~F~~DF~~A~~ 290 (297)
T cd08200 216 DFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQ-----EKFVKDFVAAWT 290 (297)
T ss_pred HHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccch-----hHHHHHHHHHHH
Confidence 9999998520 1 267899999999999999999998 7 999999999999
Q ss_pred HhhcCC
Q 045530 292 KMSSIE 297 (314)
Q Consensus 292 Km~~lg 297 (314)
||+++.
T Consensus 291 Klmeld 296 (297)
T cd08200 291 KVMNLD 296 (297)
T ss_pred HHHhcC
Confidence 999875
No 15
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=4.1e-35 Score=298.98 Aligned_cols=219 Identities=18% Similarity=0.236 Sum_probs=181.7
Q ss_pred HHHHHHHhcCCCchhhHHHHHhhccCC-------CCCCce-eeccCCcccccCCCCC--CCc-hhhHHHHHHHHHHhcC-
Q 045530 34 STVESHFKKDPTVAAGLLRLHFHDCFV-------QGCDGS-VLIAGSSAERSALPNL--GLR-GFEVIDDAKTQLEASC- 101 (314)
Q Consensus 34 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~E~~~~~N~--~l~-gf~~I~~iK~~le~~c- 101 (314)
..+++.+....-..+.|||++||++.+ ||++|+ |+|. .|++++.|. +|. .+.+++.||+++...-
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~---Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~~~~ 518 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA---PQKDWEVNEPAQLAKVLAVLEGIQAEFNAAQS 518 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc---cccCccccCHHHHHHHHHHHHHHHHHHhhccC
Confidence 567777777778899999999999985 899997 9998 599999999 884 8899999999986432
Q ss_pred -CCCCcHHHHHHHhhhhhhhhc---CC--CcccccCCCCCCCCCCCC-C---CCCCCCC------------CCHHHHHHH
Q 045530 102 -PGVVSCADILALAARDSVDLS---DG--PSWQVPTGRRDGRVSSSQ-G---LNLPSPL------------DSVTVQRQK 159 (314)
Q Consensus 102 -p~~VScADilalAar~av~~~---GG--P~~~v~~GR~D~~~s~~~-~---~~lP~p~------------~~~~~l~~~ 159 (314)
...||.||+|+||+..|||.+ || |.+++.+||.|.+..... . ..+|.+. .....|++.
T Consensus 519 ~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L~d~ 598 (726)
T PRK15061 519 GGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELLVDK 598 (726)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHHHHH
Confidence 136999999999999999999 68 999999999999876544 1 2456543 134789999
Q ss_pred HHHCCCCccchhhhhccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccch
Q 045530 160 FAAKGLDDHDLVTLVGAH-TIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDV 238 (314)
Q Consensus 160 F~~~Gl~~~elVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn 238 (314)
|.++|||++|||||+||| ++|..|..++ . |.| +.+|.+|||
T Consensus 599 a~~lglt~~EmvaL~Gg~r~Lg~~~~~S~-------~------------------------G~~-------T~~p~~fsN 640 (726)
T PRK15061 599 AQLLTLTAPEMTVLVGGLRVLGANYGGSK-------H------------------------GVF-------TDRPGVLTN 640 (726)
T ss_pred HHhCCCChHHHhheecchhhcccCCCCCC-------C------------------------CCC-------cCCCCcccc
Confidence 999999999999999997 7898874221 0 112 468999999
Q ss_pred hHhhhhcCC----------c----------c---c--ccchhhhccCcchHHHHHHHhhC--ccCchhHHHHHHHHHHHH
Q 045530 239 SFFKNVRDG----------K----------G---V--LESDQRLWEDAATRNIVQNYAGT--IRGLLGFRFDFEFPKAMI 291 (314)
Q Consensus 239 ~Yy~~l~~~----------~----------g---l--l~SD~~L~~d~~t~~~V~~yA~d--~~~~~~~~F~~~Fa~Am~ 291 (314)
.||+||++. . | + +.+|.+|.+|++.|++|+.||.| + ++||+||++||.
T Consensus 641 dfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~-----~kF~~DF~~Aw~ 715 (726)
T PRK15061 641 DFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAK-----EKFVRDFVAAWT 715 (726)
T ss_pred HHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccch-----hHHHHHHHHHHH
Confidence 999999852 1 1 1 47899999999999999999999 7 999999999999
Q ss_pred HhhcCCC
Q 045530 292 KMSSIEV 298 (314)
Q Consensus 292 Km~~lgv 298 (314)
|+++++-
T Consensus 716 Kvmeldr 722 (726)
T PRK15061 716 KVMNLDR 722 (726)
T ss_pred HHHhCCC
Confidence 9999873
No 16
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=3e-35 Score=301.38 Aligned_cols=221 Identities=17% Similarity=0.215 Sum_probs=177.3
Q ss_pred HHHHHHHH---HHhcCCCchhhHHHHHhhccCC-------CCCCce-eeccCCcccccCCCC--CCCc-hhhHHHHHHHH
Q 045530 31 IVRSTVES---HFKKDPTVAAGLLRLHFHDCFV-------QGCDGS-VLIAGSSAERSALPN--LGLR-GFEVIDDAKTQ 96 (314)
Q Consensus 31 iV~~~v~~---~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~E~~~~~N--~~l~-gf~~I~~iK~~ 96 (314)
+|++.|.+ .+....-..+.|||++||++.+ ||++|+ |+|. .|++++.| .+|. .+.+++.||++
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~---pe~~w~~N~p~gL~~vl~~Le~Ik~~ 505 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE---PQKNWPVNEPTRLAKVLAVLEKIQAE 505 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc---hhcCcccCCHHHHHHHHHHHHHHHHH
Confidence 34555554 3455667889999999999985 899997 9998 59999999 7884 88999999998
Q ss_pred HHhcCCCCCcHHHHHHHhhhhhhhhc---CCC--cccccCCCCCCCCCCCC-CCCC---CCC------------CCCHHH
Q 045530 97 LEASCPGVVSCADILALAARDSVDLS---DGP--SWQVPTGRRDGRVSSSQ-GLNL---PSP------------LDSVTV 155 (314)
Q Consensus 97 le~~cp~~VScADilalAar~av~~~---GGP--~~~v~~GR~D~~~s~~~-~~~l---P~p------------~~~~~~ 155 (314)
+.. ..||.||+|+||+..|||.+ ||| .+++.+||.|.+..... .... |.+ ......
T Consensus 506 f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td~~~~~~l~p~adgfRn~~~~~~~~~~~~~ 582 (716)
T TIGR00198 506 FAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTDAESFTPLEPIADGFRNYLKRDYAVTPEEL 582 (716)
T ss_pred cCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCCccccccCCCCCcccchhccccccCCHHHH
Confidence 852 27999999999999999999 998 57889999999876533 1111 211 123567
Q ss_pred HHHHHHHCCCCccchhhhhccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcC
Q 045530 156 QRQKFAAKGLDDHDLVTLVGAH-TIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQN 234 (314)
Q Consensus 156 l~~~F~~~Gl~~~elVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~ 234 (314)
|++.|.++|||++|||||+||| ++|+.|..++ .| .| +.+|.
T Consensus 583 l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~-------~G------------------------~~-------T~~p~ 624 (716)
T TIGR00198 583 LLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSK-------HG------------------------VF-------TDRVG 624 (716)
T ss_pred HHHHHHhCCCChHHHHheecchhhccccCCCCC-------CC------------------------CC-------cCCCC
Confidence 8899999999999999999995 9999984321 01 12 46899
Q ss_pred ccchhHhhhhcCCc--------------------c---c--ccchhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHH
Q 045530 235 KFDVSFFKNVRDGK--------------------G---V--LESDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKA 289 (314)
Q Consensus 235 ~FDn~Yy~~l~~~~--------------------g---l--l~SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~A 289 (314)
+|||.||+||++.. | + ..+|.+|.+|++.|++|+.||.|+ .+++||+||++|
T Consensus 625 ~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd---~~~~F~~DF~~A 701 (716)
T TIGR00198 625 VLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDD---AREKFVKDFVAA 701 (716)
T ss_pred ccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhccc---ccchHHHHHHHH
Confidence 99999999998621 1 2 278999999999999999999985 127999999999
Q ss_pred HHHhhcCCC
Q 045530 290 MIKMSSIEV 298 (314)
Q Consensus 290 m~Km~~lgv 298 (314)
|.|+++++-
T Consensus 702 w~Klm~ldr 710 (716)
T TIGR00198 702 WTKVMNLDR 710 (716)
T ss_pred HHHHHhCCC
Confidence 999999874
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=4.4e-31 Score=258.96 Aligned_cols=246 Identities=20% Similarity=0.241 Sum_probs=197.3
Q ss_pred HHHHHHHHHHhcC--------CCchhhHHHHHhhccCC-------CCC-CceeeccCCcccccCCCCCCCc-hhhHHHHH
Q 045530 31 IVRSTVESHFKKD--------PTVAAGLLRLHFHDCFV-------QGC-DGSVLIAGSSAERSALPNLGLR-GFEVIDDA 93 (314)
Q Consensus 31 iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~Gc-DgSill~~~~~E~~~~~N~~l~-gf~~I~~i 93 (314)
.|+..+...+... ....|-+|||+||-+.+ ||. .|..++. .+.++|.|.+|+ ++.++..|
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFa---PlnSWPDN~nLDKarRLLWPI 147 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA---PLNSWPDNANLDKARRLLWPI 147 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecc---cccCCCcccchHHHHHHhhhH
Confidence 3445555554432 15899999999999985 555 5678887 488999999995 99999999
Q ss_pred HHHHHhcCCCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCCC--------------------------------
Q 045530 94 KTQLEASCPGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSSS-------------------------------- 141 (314)
Q Consensus 94 K~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~-------------------------------- 141 (314)
|+++. ..||+||+|.|++..|++.+|+|.+.+..||.|-..+..
T Consensus 148 KkKYG----~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMG 223 (730)
T COG0376 148 KKKYG----RKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMG 223 (730)
T ss_pred hHhhc----ccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheee
Confidence 99985 589999999999999999999999999999999877654
Q ss_pred ------C-CCCCCCCCCCHHHHHHHHHHCCCCccchhhhh-cccccccccccccccccccCCCCCCCCCCCCHHHHHHHh
Q 045530 142 ------Q-GLNLPSPLDSVTVQRQKFAAKGLDDHDLVTLV-GAHTIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQ 213 (314)
Q Consensus 142 ------~-~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs-GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~ 213 (314)
+ ++..|+|..+..++++.|++|+++++|.|||+ ||||+|++|...-.+-+ +++|.-.+--.+.|-
T Consensus 224 LIYVNPEGpng~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v-------g~ePe~a~ie~qGlG 296 (730)
T COG0376 224 LIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV-------GPEPEAAPIEQQGLG 296 (730)
T ss_pred eEEeCCCCCCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc-------CCCccccchhhhccc
Confidence 4 35688999999999999999999999999998 79999999976533322 467766655555553
Q ss_pred h--cCCCC-CCCCcccc---ccCCCcCccchhHhhhhcCCc-----------------------------------cccc
Q 045530 214 T--LCPKD-GDGTKRVA---LDIDSQNKFDVSFFKNVRDGK-----------------------------------GVLE 252 (314)
Q Consensus 214 ~--~Cp~~-~~~~~~~~---~D~~tp~~FDn~Yy~~l~~~~-----------------------------------gll~ 252 (314)
. .|-.. +.++.+.. -.+.||++|||+||.+|+... .||.
T Consensus 297 W~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~Mlt 376 (730)
T COG0376 297 WANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLT 376 (730)
T ss_pred cccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeec
Confidence 3 22211 11211222 235799999999999998521 3899
Q ss_pred chhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhhc
Q 045530 253 SDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMSS 295 (314)
Q Consensus 253 SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~~ 295 (314)
+|.+|..||..++|.++|..|+ +.|.+.|++||.||..
T Consensus 377 tDlaLr~DP~Y~kIs~rf~e~p-----d~F~~~FArAWfKLtH 414 (730)
T COG0376 377 TDLALRFDPEYEKISRRFLEDP-----DEFADAFARAWFKLTH 414 (730)
T ss_pred cchhhhcChHHHHHHHHHHhCH-----HHHHHHHHHHHHHHhh
Confidence 9999999999999999999999 9999999999999975
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.54 E-value=5.3e-14 Score=139.36 Aligned_cols=216 Identities=19% Similarity=0.275 Sum_probs=161.8
Q ss_pred HHHHHHHhcCCCchhhHHHHHhhccCC-------CCCCc-eeeccCCcccccCCCCC--CC-chhhHHHHHHHHHHhcCC
Q 045530 34 STVESHFKKDPTVAAGLLRLHFHDCFV-------QGCDG-SVLIAGSSAERSALPNL--GL-RGFEVIDDAKTQLEASCP 102 (314)
Q Consensus 34 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDg-Sill~~~~~E~~~~~N~--~l-~gf~~I~~iK~~le~~cp 102 (314)
..++..+....-....++-.+|-.+-+ ||.+| -|+|. +.++++.|. -| +-+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa---PqkdWevN~P~~l~kvl~~le~iq~~fn---- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA---PQKDWEVNQPAELAKVLAVLEKIQKEFN---- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec---ccccCCCCCHHHHHHHHHHHHHHHHHhc----
Confidence 456666777777788999999988864 78887 79998 489999996 34 36788999988887
Q ss_pred CCCcHHHHHHHhhhhhhhhc---CCCcc--cccCCCCCCCCCCCC-C--CCC-CCC------------CCCHHHHHHHHH
Q 045530 103 GVVSCADILALAARDSVDLS---DGPSW--QVPTGRRDGRVSSSQ-G--LNL-PSP------------LDSVTVQRQKFA 161 (314)
Q Consensus 103 ~~VScADilalAar~av~~~---GGP~~--~v~~GR~D~~~s~~~-~--~~l-P~p------------~~~~~~l~~~F~ 161 (314)
..||.||+|+|++..|||.+ .|-.+ |+.+||.|+...... . ..| |-. ..+-.-|++.-+
T Consensus 525 kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvDkAq 604 (730)
T COG0376 525 KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVDKAQ 604 (730)
T ss_pred CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHHHHH
Confidence 47999999999999999986 67655 566999999776543 1 112 221 122345678888
Q ss_pred HCCCCccchhhhhccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccccCCCcCccchhH
Q 045530 162 AKGLDDHDLVTLVGAH-TIGQTDCQFFRYRLYNFTTTGNADPSISQSFLAQLQTLCPKDGDGTKRVALDIDSQNKFDVSF 240 (314)
Q Consensus 162 ~~Gl~~~elVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Y 240 (314)
-.+||..||++|+||- .+|..+ .|+ ...+. +..|..+.|.|
T Consensus 605 lL~LtapemtVLiGGlRvLg~n~-----------g~s-------------------------~~GVf--T~~pg~LtndF 646 (730)
T COG0376 605 LLTLTAPEMTVLIGGLRVLGANY-----------GGS-------------------------KHGVF--TDRPGVLTNDF 646 (730)
T ss_pred HhccCCccceEEEcceEeeccCC-----------CCC-------------------------cccee--ccCcccccchh
Confidence 9999999999999875 345432 111 11233 34688888888
Q ss_pred hhhhcCC----------c----------cc-----ccchhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHhhc
Q 045530 241 FKNVRDG----------K----------GV-----LESDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKMSS 295 (314)
Q Consensus 241 y~~l~~~----------~----------gl-----l~SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km~~ 295 (314)
|.||++- + |- -..|..+-+++..|.+.+.||.|. .+++|.+||+.||.|..+
T Consensus 647 FvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dd---a~ekFv~DFvaaw~kVMn 723 (730)
T COG0376 647 FVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDD---AKEKFVKDFVAAWTKVMN 723 (730)
T ss_pred hhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccc---hHHHHHHHHHHHHHHHhc
Confidence 9888752 1 21 357888889999999999999875 359999999999999998
Q ss_pred CC
Q 045530 296 IE 297 (314)
Q Consensus 296 lg 297 (314)
+.
T Consensus 724 ~D 725 (730)
T COG0376 724 LD 725 (730)
T ss_pred cc
Confidence 75
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=65.58 E-value=41 Score=32.91 Aligned_cols=56 Identities=14% Similarity=0.115 Sum_probs=34.0
Q ss_pred cCCCcccccCCCCCCCCCCCC-CCCCCC-C---CCCHHHHHHHHHHCCCCc----------cchhhhhccc
Q 045530 122 SDGPSWQVPTGRRDGRVSSSQ-GLNLPS-P---LDSVTVQRQKFAAKGLDD----------HDLVTLVGAH 177 (314)
Q Consensus 122 ~GGP~~~v~~GR~D~~~s~~~-~~~lP~-p---~~~~~~l~~~F~~~Gl~~----------~elVaLsGaH 177 (314)
+|-..+..+.||.+.+.-.+. ....+. . -..+.++.+.|++.|+.. +|+..|.|+|
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qi~~laG~D 250 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNTGEILELAGCD 250 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeEEEecccCCHHHHHHHHCCC
Confidence 477888999999865432222 111221 1 124677888898888754 4555555655
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=56.74 E-value=9.5 Score=29.62 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHhhcCCCc
Q 045530 281 RFDFEFPKAMIKMSSIEVK 299 (314)
Q Consensus 281 ~F~~~Fa~Am~Km~~lgv~ 299 (314)
+...+|..||.||+.||..
T Consensus 2 ~m~~~F~~am~KlavLG~d 20 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGHD 20 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS-
T ss_pred hHHHHHHHHHHHHHHhcCC
Confidence 3567899999999999864
No 21
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=44.44 E-value=1.5e+02 Score=28.86 Aligned_cols=49 Identities=10% Similarity=-0.018 Sum_probs=29.8
Q ss_pred hhcCCCcccccCCCCCCCCCCCC-CCCCCC----CCCCHHHHHHHHHHCCCCcc
Q 045530 120 DLSDGPSWQVPTGRRDGRVSSSQ-GLNLPS----PLDSVTVQRQKFAAKGLDDH 168 (314)
Q Consensus 120 ~~~GGP~~~v~~GR~D~~~s~~~-~~~lP~----p~~~~~~l~~~F~~~Gl~~~ 168 (314)
..+|-..+..+.||-|-+.-... ....|. +-..+.++.+.|++.|+..+
T Consensus 166 a~AGa~~ISPFVgRi~dw~~~~~g~~~~~~~~d~Gv~~v~~i~~~~k~~g~~T~ 219 (317)
T TIGR00874 166 AEAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYYKKHGYPTE 219 (317)
T ss_pred HHcCCCEEEeecchHhHhhhhccCccccccccCchHHHHHHHHHHHHHcCCCcE
Confidence 33588899999999876422111 001111 22457788889999897643
No 22
>PRK12346 transaldolase A; Provisional
Probab=30.88 E-value=35 Score=33.13 Aligned_cols=64 Identities=9% Similarity=-0.020 Sum_probs=37.0
Q ss_pred CCcHHHHHHHhhhhhhh--hcCCCcccccCCCCCCCCCCCCC-CCCCCC----CCCHHHHHHHHHHCCCCc
Q 045530 104 VVSCADILALAARDSVD--LSDGPSWQVPTGRRDGRVSSSQG-LNLPSP----LDSVTVQRQKFAAKGLDD 167 (314)
Q Consensus 104 ~VScADilalAar~av~--~~GGP~~~v~~GR~D~~~s~~~~-~~lP~p----~~~~~~l~~~F~~~Gl~~ 167 (314)
.|+|-=.+.+....|+. .+|-..+..+.||-|-+.-.... ..++.. -..+.++.+.|++.|+..
T Consensus 149 GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~T 219 (316)
T PRK12346 149 GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHRYET 219 (316)
T ss_pred CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHHHHHHHcCCCc
Confidence 34544444555444443 35888999999998865322210 112221 234677888898888653
No 23
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=29.71 E-value=46 Score=33.24 Aligned_cols=63 Identities=17% Similarity=0.160 Sum_probs=36.7
Q ss_pred CcHHHHHHHhhhhhhh--hcCCCcccccCCCCCCCCCCCCC-CCCCCCCC----CHHHHHHHHHHCCCCc
Q 045530 105 VSCADILALAARDSVD--LSDGPSWQVPTGRRDGRVSSSQG-LNLPSPLD----SVTVQRQKFAAKGLDD 167 (314)
Q Consensus 105 VScADilalAar~av~--~~GGP~~~v~~GR~D~~~s~~~~-~~lP~p~~----~~~~l~~~F~~~Gl~~ 167 (314)
|.|-=.+.+....|+. .+|-..+..+.||.|-+.-.... ..+|.+.+ .+.++.+.|++.|+..
T Consensus 155 I~~n~TlvFS~~QA~aaaeAGa~~ISPfVgRi~dw~~~~~g~~~~~~~~dpGv~~v~~i~~~~~~~~~~T 224 (391)
T PRK12309 155 IHCNLTLLFGFHQAIACAEAGVTLISPFVGRILDWYKKETGRDSYPGAEDPGVQSVTQIYNYYKKFGYKT 224 (391)
T ss_pred CceeeeeecCHHHHHHHHHcCCCEEEeecchhhhhhhhccCCCccccccchHHHHHHHHHHHHHhcCCCc
Confidence 4444444444444332 24888999999998774322221 12443333 3678888898888754
No 24
>PLN02438 inositol-3-phosphate synthase
Probab=25.28 E-value=5.2e+02 Score=26.87 Aligned_cols=103 Identities=17% Similarity=0.131 Sum_probs=60.0
Q ss_pred CCCCceeeccCCcccccCCCCCCCchhhHHHHHHHHHHhcCCCCCcHHHHHHHhhhhhhhhcCCCcccccC--CCCCCCC
Q 045530 61 QGCDGSVLIAGSSAERSALPNLGLRGFEVIDDAKTQLEASCPGVVSCADILALAARDSVDLSDGPSWQVPT--GRRDGRV 138 (314)
Q Consensus 61 ~GcDgSill~~~~~E~~~~~N~~l~gf~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~--GR~D~~~ 138 (314)
.|||--|.+...+.|+-.+--.++. +.++.+.+.++..-+ .||.+=+.|.||-. .|-|++..-+ +. +.
T Consensus 220 n~ld~vVVlwtAsTEr~~~~~~~~~--~t~~~l~~ai~~~~~-eispS~~YA~AAl~----eG~~fVNgsP~~t~-vP-- 289 (510)
T PLN02438 220 NKVDKVVVLWTANTERYSNVVVGLN--DTMENLLASIEKDEA-EISPSTLYALACIL----EGVPFINGSPQNTF-VP-- 289 (510)
T ss_pred hCCCeEEEEECCCCCCCCcCCCccc--CCHHHHHHHHhcCCC-cCChHHHHHHHHHH----cCCCeEecCCcccc-Ch--
Confidence 5999988887666675433222332 456666666665434 69999999988864 4555554322 21 10
Q ss_pred CCCC-C--CCCCCCCCC--------HHHHHHHHHHCCCCccchhhh
Q 045530 139 SSSQ-G--LNLPSPLDS--------VTVQRQKFAAKGLDDHDLVTL 173 (314)
Q Consensus 139 s~~~-~--~~lP~p~~~--------~~~l~~~F~~~Gl~~~elVaL 173 (314)
+..+ + .++|-.-++ =+.|..+|..+|+.+.-.+-+
T Consensus 290 ~~~elA~~~gvpi~GDD~KSGqT~~ksvLa~~l~~RGlkv~s~~s~ 335 (510)
T PLN02438 290 GVIELAVKKNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSY 335 (510)
T ss_pred hhHHHHHHcCCCEecccccCCCchhHHHHHHHHHHcCCceeeEEEE
Confidence 1111 1 345533222 255778888899888766544
No 25
>PF14919 MTBP_mid: MDM2-binding
Probab=24.39 E-value=76 Score=30.96 Aligned_cols=69 Identities=25% Similarity=0.282 Sum_probs=47.9
Q ss_pred cCCCCCCCchhhHHHHHHHHHHhcCCCCCcHHHHHHHhhhhhhhhcCCCcccccCCCCCCCCCCCCCCCCCCCCCCHHHH
Q 045530 77 SALPNLGLRGFEVIDDAKTQLEASCPGVVSCADILALAARDSVDLSDGPSWQVPTGRRDGRVSSSQGLNLPSPLDSVTVQ 156 (314)
Q Consensus 77 ~~~~N~~l~gf~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~lP~p~~~~~~l 156 (314)
+||+-.-|+.+|.++++|.+.... .+| + .-+-.+|++|+...+.. -.++.+|
T Consensus 265 eWPER~VLQNlEn~ek~kQK~R~~---~l~---------~---------SseqLLG~Kdg~r~s~t-------LLDAkEL 316 (342)
T PF14919_consen 265 EWPERHVLQNLENFEKAKQKMRTG---SLP---------R---------SSEQLLGHKDGQRDSVT-------LLDAKEL 316 (342)
T ss_pred cCcHHHHHHHHHHHHHHHHHHhcc---cCC---------C---------CHHHhcCCCCCCCCCcc-------cccHHHH
Confidence 455555667889999999998631 111 1 11235899999765544 3478999
Q ss_pred HHHHHHCCCCccchhhh
Q 045530 157 RQKFAAKGLDDHDLVTL 173 (314)
Q Consensus 157 ~~~F~~~Gl~~~elVaL 173 (314)
+..|..-||-.-|+--|
T Consensus 317 LK~FT~dGlPvgDLQPL 333 (342)
T PF14919_consen 317 LKYFTSDGLPVGDLQPL 333 (342)
T ss_pred HhhcCCCCcccCcCccc
Confidence 99999999988886544
No 26
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=23.43 E-value=63 Score=31.32 Aligned_cols=67 Identities=12% Similarity=0.047 Sum_probs=37.2
Q ss_pred CCcHHHHHHHhhhhhhh--hcCCCcccccCCCCCCCCCCCC-CCCCCC----CCCCHHHHHHHHHHCCCCccch
Q 045530 104 VVSCADILALAARDSVD--LSDGPSWQVPTGRRDGRVSSSQ-GLNLPS----PLDSVTVQRQKFAAKGLDDHDL 170 (314)
Q Consensus 104 ~VScADilalAar~av~--~~GGP~~~v~~GR~D~~~s~~~-~~~lP~----p~~~~~~l~~~F~~~Gl~~~el 170 (314)
.|+|-=.+.+....|+. .+|-..+..+.||-|-+.-... ....+. .-..+.++.+.|++.|+..+=|
T Consensus 148 GI~vn~TlvFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~d~Gv~~v~~i~~~~~~~~~~T~vm 221 (313)
T cd00957 148 GIHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYKKHSGDKAYTAEEDPGVASVKKIYNYYKKFGYKTKVM 221 (313)
T ss_pred CCceeeeeecCHHHHHHHHHcCCCEEEeecchHHHhhhhccccccCCccCCcHHHHHHHHHHHHHHcCCCcEEE
Confidence 34444444444444433 3477888999999876422111 001111 1234778888999999865433
No 27
>PLN00017 photosystem I reaction centre subunit VI; Provisional
Probab=21.26 E-value=68 Score=25.24 Aligned_cols=15 Identities=20% Similarity=0.191 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHhh
Q 045530 280 FRFDFEFPKAMIKMS 294 (314)
Q Consensus 280 ~~F~~~Fa~Am~Km~ 294 (314)
++||+.|+..+.|=+
T Consensus 43 skFFe~~A~~~tkR~ 57 (90)
T PLN00017 43 SKFFETFAAPFTKRG 57 (90)
T ss_pred HHHHHHHhhhhhHHH
Confidence 999999999887743
No 28
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=20.67 E-value=47 Score=28.29 Aligned_cols=33 Identities=39% Similarity=0.476 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHCCCCccchhh-hhccccccccc
Q 045530 151 DSVTVQRQKFAAKGLDDHDLVT-LVGAHTIGQTD 183 (314)
Q Consensus 151 ~~~~~l~~~F~~~Gl~~~elVa-LsGaHTiG~ah 183 (314)
+++.+.+-.|+++||++.++=+ |--+|-||++.
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhh
Confidence 3456666789999999999755 45999999986
No 29
>COG3652 Predicted outer membrane protein [Function unknown]
Probab=20.01 E-value=93 Score=27.44 Aligned_cols=46 Identities=17% Similarity=0.203 Sum_probs=30.4
Q ss_pred cCccchhHhhhhcCCcccccchhhhccCcchHHHHHHHhhCccCchhHHHHHHHHHHHHHh
Q 045530 233 QNKFDVSFFKNVRDGKGVLESDQRLWEDAATRNIVQNYAGTIRGLLGFRFDFEFPKAMIKM 293 (314)
Q Consensus 233 p~~FDn~Yy~~l~~~~gll~SD~~L~~d~~t~~~V~~yA~d~~~~~~~~F~~~Fa~Am~Km 293 (314)
+..||+.|+.+.+. .+..+-...+.|+.++ .++.=.+.|++.+.++
T Consensus 109 g~~FDk~Y~~~~va------------~Hq~~~~l~~~~~~~~---~an~~L~~~aet~L~~ 154 (170)
T COG3652 109 GRGFDKAYAENMVA------------YHQQTLNLLETYAADS---AANAELQSFAETALPR 154 (170)
T ss_pred cccccHHHHHHHHH------------HHHHHHHHHHHhhccc---CCCHHHHHHHHHHHHH
Confidence 77899999987553 2445556667777654 2355666777776665
Done!