Query 045533
Match_columns 242
No_of_seqs 130 out of 735
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 04:44:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g4d_A (+)-delta-cadinene synt 100.0 5E-93 1.7E-97 691.6 21.9 237 1-242 91-327 (554)
2 3m00_A Aristolochene synthase; 100.0 4.4E-93 1.5E-97 691.5 20.7 236 1-242 87-323 (550)
3 3n0f_A Isoprene synthase; terp 100.0 4.9E-93 1.7E-97 692.1 18.9 238 1-242 85-325 (555)
4 2ong_A 4S-limonene synthase; m 100.0 2.7E-90 9.4E-95 672.3 22.1 239 1-242 71-316 (543)
5 2j5c_A 1,8-cineole synthase; t 100.0 1.3E-89 4.5E-94 670.5 18.6 237 1-242 104-343 (569)
6 1n1b_A (+)-bornyl diphosphate 100.0 3.9E-89 1.3E-93 664.8 19.7 240 1-242 75-322 (549)
7 3s9v_A Abietadiene synthase, c 100.0 5.5E-87 1.9E-91 670.8 24.1 239 1-242 291-558 (785)
8 3sdr_A Alpha-bisabolene syntha 100.0 1.2E-86 4E-91 670.6 21.1 239 1-242 319-586 (817)
9 3p5p_A Taxadiene synthase; cla 100.0 6.8E-86 2.3E-90 661.3 23.4 237 1-242 267-527 (764)
10 3pya_A ENT-copalyl diphosphate 100.0 1.2E-84 4.2E-89 648.1 23.4 236 1-242 266-531 (727)
11 1ps1_A Pentalenene synthase; a 99.6 6.1E-17 2.1E-21 146.4 3.8 83 158-241 15-101 (337)
12 3bny_A Aristolochene synthase; 99.6 2.5E-16 8.7E-21 141.3 5.8 82 158-241 25-108 (320)
13 1di1_A Aristolochene synthase; 99.6 3.2E-16 1.1E-20 139.1 5.0 80 160-241 13-94 (300)
14 3kb9_A EPI-isozizaene synthase 99.1 2.3E-11 7.8E-16 112.8 4.5 73 168-241 66-142 (382)
15 1yyq_A Trichodiene synthase; t 44.9 36 0.0012 31.1 6.0 54 185-240 63-116 (374)
16 3v1v_A 2-MIB synthase, 2-methy 31.9 33 0.0011 31.9 3.6 62 167-229 134-198 (433)
17 1l1q_A Adenine phosphoribosylt 31.7 8.3 0.00028 31.2 -0.5 21 218-238 120-140 (186)
18 2ki0_A DS119; beta-alpha-beta, 30.1 31 0.0011 20.6 2.0 13 227-239 10-22 (36)
19 1vch_A Phosphoribosyltransfera 30.0 9.2 0.00031 30.3 -0.5 21 218-238 123-143 (175)
20 1nul_A XPRT, xanthine-guanine 28.8 14 0.00047 28.9 0.4 20 218-237 84-103 (152)
21 1y0b_A Xanthine phosphoribosyl 27.9 10 0.00036 30.7 -0.5 21 218-238 123-143 (197)
22 1vdm_A Purine phosphoribosyltr 26.9 10 0.00036 29.2 -0.7 21 218-238 86-106 (153)
23 2dy0_A APRT, adenine phosphori 24.9 13 0.00044 30.1 -0.5 21 218-238 129-149 (190)
24 1g2q_A Adenine phosphoribosylt 24.6 13 0.00045 30.0 -0.5 21 218-238 125-145 (187)
25 1ufr_A TT1027, PYR mRNA-bindin 24.4 13 0.00046 29.6 -0.5 21 218-238 99-119 (181)
26 1a3c_A PYRR, pyrimidine operon 24.3 13 0.00046 29.5 -0.5 21 218-238 101-121 (181)
27 1zn8_A APRT, adenine phosphori 23.6 14 0.00048 29.4 -0.5 21 218-238 123-143 (180)
28 2yzk_A OPRT, oprtase, orotate 23.5 14 0.00049 29.6 -0.5 21 218-238 109-129 (178)
29 1tzy_D Histone H4-VI; histone- 22.4 29 0.001 25.8 1.1 44 25-91 32-76 (103)
30 2p1z_A Phosphoribosyltransfera 22.4 16 0.00056 29.3 -0.3 21 218-238 117-137 (180)
31 2yfw_B Histone H4, H4; cell cy 22.3 29 0.001 25.8 1.1 43 26-91 33-76 (103)
32 1nvp_D Transcription initiatio 20.3 74 0.0025 24.1 3.1 36 66-112 2-37 (108)
No 1
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=5e-93 Score=691.62 Aligned_cols=237 Identities=54% Similarity=0.944 Sum_probs=228.3
Q ss_pred ChHHHHHHHHhhhcCCCCCCChHHHHHHHHHHHhcCcccchhhhcccccccccccccchhcHHHHHhHHhhhccCCCCcc
Q 045533 1 KEIEDAIQKLCPIYIHSNSPDLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEH 80 (242)
Q Consensus 1 ~EI~~~L~~i~~~~~~~~~~Dl~~~AL~FRLLR~~Gy~VS~DvF~~F~d~~G~F~~~~~~d~~glL~LYeAS~l~~~gE~ 80 (242)
+||+++|++||+.. ..+..||++|||+|||||||||+||||||++|+|++|+|++++.+|++|||||||||||++|||+
T Consensus 91 ~EI~~~L~~i~~~~-~~~~~dl~~~al~FRlLR~hGy~VS~dvf~~F~~~~g~F~~~l~~d~~glL~LYeAs~l~~~gE~ 169 (554)
T 3g4d_A 91 KEIEDELENIYHNN-NDAENDLYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGED 169 (554)
T ss_dssp HHHHHHHHHHHHSC-CCTTCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCHHHHHCHHHHHHHHHHHTTCCTTCH
T ss_pred HHHHHHHHHHHhcc-CCCCCCHHHHHHHHHHHHhcCCCCChhHHhhhcccCCCcccccccchHHHHHHHHHHhCCCCCcH
Confidence 49999999999862 22337999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCCCchHHHHHHhcCCCccCChhhhHHHHhHHhhhccCCCcccHHHHHHHHhhhHHHHHh
Q 045533 81 ILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLHNKTLLNFAKLDFNILLEL 160 (242)
Q Consensus 81 iLdeA~~fs~~~L~~~~~~~~~~~~l~~~V~~aL~~P~~~~~~rle~r~yI~~Y~~~~~~~~n~~lLelAklDFn~~Q~~ 160 (242)
|||+|+.||++||+++++ .++++|+++|+|||++|||+++||+|||+||++|+ +++++|++||||||+|||+||++
T Consensus 170 iLdeA~~fs~~~L~~~~~--~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~--~~~~~n~~lLelAkldFn~~Q~~ 245 (554)
T 3g4d_A 170 ILDEAISFTTHHLSLAVA--SLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQ--DIESHNKALLEFAKIDFNMLQFL 245 (554)
T ss_dssp HHHHHHHHHHHHHHHHST--TCCTTHHHHHHHHHHCCTTTSCHHHHHHHHHHHHH--SSTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh--ccCchHHHHHHHHhCCCccCCchHHHHHHHHHHhC--cCccccHHHHHHHHHHHHHHHHH
Confidence 999999999999999886 67788999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHHHHHHHHhHHHhhcccccCCCCHHHHHHHHHh
Q 045533 161 HKEELNELTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEA 240 (242)
Q Consensus 161 hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tiiDD~yD~ygt~eEl~~ft~a 240 (242)
||+||++++|||+++||+++|||||||+||||||++|++|||+||.+|++|||+++|+|+|||+||+|||+|||++||+|
T Consensus 246 hq~El~~l~rWwk~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~ygTleEl~~ft~a 325 (554)
T 3g4d_A 246 HRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTNA 325 (554)
T ss_dssp HHHHHHHHHHHHHHHCHHHHCTTCCCCHHHHHHHHHHHCCSGGGHHHHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCcccCCchHHHHHHHHHHHHHhhCCccccHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hC
Q 045533 241 VQ 242 (242)
Q Consensus 241 v~ 242 (242)
|+
T Consensus 326 i~ 327 (554)
T 3g4d_A 326 IE 327 (554)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 2
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=4.4e-93 Score=691.46 Aligned_cols=236 Identities=51% Similarity=0.916 Sum_probs=228.6
Q ss_pred ChHHHHHHHHhhhcCCCCCCChHHHHHHHHHHHhcCcccchhhhcccccccccccccchhcHHHHHhHHhhhccCCCCcc
Q 045533 1 KEIEDAIQKLCPIYIHSNSPDLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEH 80 (242)
Q Consensus 1 ~EI~~~L~~i~~~~~~~~~~Dl~~~AL~FRLLR~~Gy~VS~DvF~~F~d~~G~F~~~~~~d~~glL~LYeAS~l~~~gE~ 80 (242)
+||+++|++||+.| ....||++|||+|||||||||+||||||++|+|++|+|++++.+|++|||||||||||++|||+
T Consensus 87 ~EI~~~L~~i~~~~--~~~~dl~~~al~FRLLR~hGy~VS~dvf~~F~~~~G~F~~~l~~d~~glL~LYeAs~l~~~gE~ 164 (550)
T 3m00_A 87 KEIDDILDQIYNQN--SNCNDLCTSALQFRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADD 164 (550)
T ss_dssp HHHHHHHHHHHHHC--CCCSSHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTTCG
T ss_pred HHHHHHHHHHHHhc--ccCCCHHHHHHHHHHHHhcCCCCChHHhhhccccCCCccccchhchHHHHHHHHHHhcCCCCcH
Confidence 49999999999984 2357999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCCCchHHHHHHhcCCCccCChhhhHHHHhHH-hhhccCCCcccHHHHHHHHhhhHHHHH
Q 045533 81 ILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMS-MINSTSDHLHNKTLLNFAKLDFNILLE 159 (242)
Q Consensus 81 iLdeA~~fs~~~L~~~~~~~~~~~~l~~~V~~aL~~P~~~~~~rle~r~yI~-~Y~~~~~~~~n~~lLelAklDFn~~Q~ 159 (242)
|||+|+.||++||+++++ +++++|+++|+|||++|||+++||+|||+||+ .|+ +++++|++||||||+|||+||+
T Consensus 165 iLdeA~~fs~~~L~~~~~--~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~~Y~--~~~~~n~~lLelAkldFn~~Q~ 240 (550)
T 3m00_A 165 ILEDALAFSTIHLESAAP--HLKSPLREQVTHALEQCLHKGVPRVETRFFISSIYD--KEQSKNNVLLRFAKLDFNLLQM 240 (550)
T ss_dssp GGTTHHHHHHHHHHHHGG--GCCTTHHHHHHHHHHSCSTTSCHHHHHHHHHHHTGG--GCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh--ccCccHHHHHHHHhCCCccCCchHHHHHHHHHHHhc--ccccccHHHHHHHHHHHHHHHH
Confidence 999999999999999886 56788999999999999999999999999999 999 9999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHHHHHHHHhHHHhhcccccCCCCHHHHHHHHH
Q 045533 160 LHKEELNELTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTE 239 (242)
Q Consensus 160 ~hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tiiDD~yD~ygt~eEl~~ft~ 239 (242)
+||+||++++|||+++||+++|||||||+||||||++|++|||+||.+|+++||+++|+|+|||+||+|||+|||++||+
T Consensus 241 ~hq~EL~~l~rWwk~~~l~~~l~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~ygTleEl~~ft~ 320 (550)
T 3m00_A 241 LHKQELAQVSRWWKDLDFVTTLPYARDRVVECYFWTLGVYFEPQYSQARVMLVKTISMISIVDDTFDAYGTVKELEAYTD 320 (550)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHSTTSCCCHHHHHHHHHHHCCSGGGHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCccccCcHHHhHHHHHHHHHHhhCCccchHHHHHHHHHHHHHHHHHHHccccCCHHHHHHHHH
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhC
Q 045533 240 AVQ 242 (242)
Q Consensus 240 av~ 242 (242)
||+
T Consensus 321 ai~ 323 (550)
T 3m00_A 321 AIQ 323 (550)
T ss_dssp HHH
T ss_pred HHH
Confidence 985
No 3
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=4.9e-93 Score=692.06 Aligned_cols=238 Identities=42% Similarity=0.749 Sum_probs=226.9
Q ss_pred ChHHHHHHHHhhhc---CCCCCCChHHHHHHHHHHHhcCcccchhhhcccccccccccccchhcHHHHHhHHhhhccCCC
Q 045533 1 KEIEDAIQKLCPIY---IHSNSPDLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVR 77 (242)
Q Consensus 1 ~EI~~~L~~i~~~~---~~~~~~Dl~~~AL~FRLLR~~Gy~VS~DvF~~F~d~~G~F~~~~~~d~~glL~LYeAS~l~~~ 77 (242)
+||+++|++||+.. .+ ...||++|||+|||||||||+||||||++|+|++|+|++++.+||+|||||||||||++|
T Consensus 85 ~EI~~~L~~i~~~~~~~~~-~~~DL~~~Al~FRLLR~hGy~VS~dvF~~F~d~~G~F~~~l~~dv~glL~LYeAs~l~~~ 163 (555)
T 3n0f_A 85 SDIRRALDRFVSSGGFDGV-TKTSLHATALSFRLLRQHGFEVSQEAFSGFKDQNGNFLENLKEDTKAILSLYEASFLALE 163 (555)
T ss_dssp HHHHHHHHHHHHTCHHHHH-TTTCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHhhcccccc-ccCCHHHHHHHHHHHHhcCCCcChHHHhcccccCccchhhhhhhhHHHHHHHHHHhcccC
Confidence 49999999999741 02 347999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHHhHhhcCCCCCchHHHHHHhcCCCccCChhhhHHHHhHHhhhccCCCcccHHHHHHHHhhhHHH
Q 045533 78 GEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLHNKTLLNFAKLDFNIL 157 (242)
Q Consensus 78 gE~iLdeA~~fs~~~L~~~~~~~~~~~~l~~~V~~aL~~P~~~~~~rle~r~yI~~Y~~~~~~~~n~~lLelAklDFn~~ 157 (242)
||+|||+|+.||++||++++.+ .++++|+++|+|||++|||+++||+|||+||++|+ +++++|++||||||||||+|
T Consensus 164 gE~iLdeA~~Fs~~~L~~~~~~-~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~--~~~~~n~~lLelAKlDFN~~ 240 (555)
T 3n0f_A 164 GENILDEARVFAISHLKELSEE-KIGKELAEQVNHALELPLHRRTQRLEAVWSIEAYR--KKEDANQVLLELAILDYNMI 240 (555)
T ss_dssp TCHHHHHHHHHHHHHHHTCCHH-HHCHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHT--TCTTCCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHhcCCcccCchHHHHHHHHHHhc--ccccccHHHHHHHHHhHHHH
Confidence 9999999999999999987652 35678999999999999999999999999999999 99999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHHHHHHHHhHHHhhcccccCCCCHHHHHHH
Q 045533 158 LELHKEELNELTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLF 237 (242)
Q Consensus 158 Q~~hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tiiDD~yD~ygt~eEl~~f 237 (242)
|++||+||++++|||+++||+++|||||||+||||||++|++|||+||.+|++|||+++|+|+|||+||+|||+|||++|
T Consensus 241 Q~~hq~EL~~lsrWwk~~~l~~~l~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~ygt~eEl~~f 320 (555)
T 3n0f_A 241 QSVYQRDLRETSRWWRRVGLATKLHFARDRLIESFYWAVGVAFEPQYSDCRNSVAKMFSFVTIIDDIYDVYGTLDELELF 320 (555)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHCTTCCCCHHHHHHHHHHHCCSGGGHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHcCCcccCCchhhHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhccccCCHHHHHHH
Confidence 99999999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhC
Q 045533 238 TEAVQ 242 (242)
Q Consensus 238 t~av~ 242 (242)
|+||+
T Consensus 321 t~ai~ 325 (555)
T 3n0f_A 321 TDAVE 325 (555)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99985
No 4
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=2.7e-90 Score=672.25 Aligned_cols=239 Identities=38% Similarity=0.644 Sum_probs=228.7
Q ss_pred ChHHHHHHHHhhhcCC-----CC-CCChHHHHHHHHHHHhcCcccchhhhcccccccccccccchhcHHHHHhHHhhhcc
Q 045533 1 KEIEDAIQKLCPIYIH-----SN-SPDLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYM 74 (242)
Q Consensus 1 ~EI~~~L~~i~~~~~~-----~~-~~Dl~~~AL~FRLLR~~Gy~VS~DvF~~F~d~~G~F~~~~~~d~~glL~LYeAS~l 74 (242)
+||+++|++||+.+.. .. ..||++|||+|||||||||+||||||++|||++|+|++++.+||+|||||||||||
T Consensus 71 ~EI~~~L~~i~~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~vs~dvf~~Fk~~~g~F~~~l~~d~~glL~Ly~As~l 150 (543)
T 2ong_A 71 NEFKEILSSIYLDHHYYKNPFPKEERDLYSTSLAFRLLREHGFQVAQEVFDSFKNEEGEFKESLSDDTRGLLQLYEASFL 150 (543)
T ss_dssp HHHHHHHHHHHHTTTCCCSSCCCCCCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCTTGGGCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCCCccHHHHhcccCCCCCccchhhhccHHHHHHHHHHHc
Confidence 4999999999987421 11 46999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHHHHHHhHhhcCCC-CCchHHHHHHhcCCCccCChhhhHHHHhHHhhhccCCCcccHHHHHHHHhh
Q 045533 75 AVRGEHILDEAIAFTTTHLKSLVAQDHV-TPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLHNKTLLNFAKLD 153 (242)
Q Consensus 75 ~~~gE~iLdeA~~fs~~~L~~~~~~~~~-~~~l~~~V~~aL~~P~~~~~~rle~r~yI~~Y~~~~~~~~n~~lLelAklD 153 (242)
++|||+|||||+.||++||++++.++ + +++|+++|+|||++|||+++||+|||+||++|+ +++++|++||||||||
T Consensus 151 ~~~gE~iL~eA~~Ft~~~L~~~~~~~-~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~--~~~~~n~~lLelAkld 227 (543)
T 2ong_A 151 LTEGETTLESAREFATKFLEEKVNEG-GVDGDLLTRIAYSLDIPLHWRIKRPNAPVWIEWYR--KRPDMNPVVLELAILD 227 (543)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHSS-CSSSHHHHHHHHHHHSCTTTSCSTTTHHHHHHHHH--TCSSCCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhcc-CCCCcHHHHHHHHHhhhHhccchHHHHHHHHHHhc--cCccccHHHHHHHHHh
Confidence 99999999999999999999998742 5 788999999999999999999999999999999 9999999999999999
Q ss_pred hHHHHHhhHHHHHHHHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHHHHHHHHhHHHhhcccccCCCCHHH
Q 045533 154 FNILLELHKEELNELTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEE 233 (242)
Q Consensus 154 Fn~~Q~~hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tiiDD~yD~ygt~eE 233 (242)
||+||++||+||++++|||+++||.++|||||||++|||||++|++|||++|.+|+++||++++++++||+||+|||+||
T Consensus 228 Fn~~Q~~hq~El~~l~rWwk~~~l~~kl~faRdR~ve~Yfw~~a~~feP~~s~~Rl~~aK~~~litviDD~fD~~gt~eE 307 (543)
T 2ong_A 228 LNIVQAQFQEELKESFRWWRNTGFVEKLPFARDRLVECYFWNTGIIEPRQHASARIMMGKVNALITVIDDIYDVYGTLEE 307 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHSCSSCCCHHHHHHTHHHHTCSTTCHHHHHHHHHHHHHHHHHHHHHHSSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcccccHHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHHHHHHHHHhccCCCHHH
Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhC
Q 045533 234 LSLFTEAVQ 242 (242)
Q Consensus 234 l~~ft~av~ 242 (242)
|++||+||+
T Consensus 308 l~~ft~ai~ 316 (543)
T 2ong_A 308 LEQFTDLIR 316 (543)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999984
No 5
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=1.3e-89 Score=670.45 Aligned_cols=237 Identities=37% Similarity=0.638 Sum_probs=224.0
Q ss_pred ChHHHHHHHHh-hhcCCCCCCChHHHHHHHHHHHhcCcccchhhhcccccccc-cccccchhcHHHHHhHHhhhccCCCC
Q 045533 1 KEIEDAIQKLC-PIYIHSNSPDLHTVSLHFRLLRQQGIKISCDVFEKFKDDEG-RFKSSLINDVQGMLSLYEAAYMAVRG 78 (242)
Q Consensus 1 ~EI~~~L~~i~-~~~~~~~~~Dl~~~AL~FRLLR~~Gy~VS~DvF~~F~d~~G-~F~~~~~~d~~glL~LYeAS~l~~~g 78 (242)
+||+++|++|| +.+ .....||++|||+|||||||||+||||||++|||++| +|++++.+||+|||||||||||++||
T Consensus 104 ~EI~~~L~~i~~~~~-~~~~~Dl~~~al~FRlLR~hGy~Vs~dvF~~Fkd~~G~~F~~~l~~dv~glL~LY~As~l~~~g 182 (569)
T 2j5c_A 104 REIVEILNSKYYTNN-EIDERDLYSTALRFRLLRQYDFSVSQEVFDCFKNAKGTDFKPSLVDDTRGLLQLYEASFLSAQG 182 (569)
T ss_dssp HHHHHHHHHHTTSSC-CSCTTCHHHHHHHHHHHHHTTCCCCGGGGGGGBCSSSSSBCGGGGGCHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHHHhcc-CcccCChhhhhHHhHHHHhcCCCcCHHHHhcccCCCCCccccchhhccHHHHHHHHHHhcCCCC
Confidence 49999999999 763 1135699999999999999999999999999999999 99999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHhHhhcCCC-CCchHHHHHHhcCCCccCChhhhHHHHhHHhhhccCCCcccHHHHHHHHhhhHHH
Q 045533 79 EHILDEAIAFTTTHLKSLVAQDHV-TPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLHNKTLLNFAKLDFNIL 157 (242)
Q Consensus 79 E~iLdeA~~fs~~~L~~~~~~~~~-~~~l~~~V~~aL~~P~~~~~~rle~r~yI~~Y~~~~~~~~n~~lLelAklDFn~~ 157 (242)
|+|||||+.||++||++++. .+ +++|+++|+|||++|||+++||+|||+||++|+ +++++|++||||||||||+|
T Consensus 183 E~iLdeA~~Ft~~~L~~~~~--~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~--~~~~~n~~lLelAkldFn~~ 258 (569)
T 2j5c_A 183 EETLRLARDFATKFLQKRVL--VDKDINLLSSIERALELPTHWRVQMPNARSFIDAYK--RRPDMNPTVLELAKLDFNMV 258 (569)
T ss_dssp CHHHHHHHHHHHHTTSSCC------CHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHT--TCTTCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHh--hcCCCcHHHHHHHHhcCccccCcHHHHHHHHHHHhc--cCccccHHHHHHHHHhHHHH
Confidence 99999999999999999876 45 788999999999999999999999999999999 99999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHHHHHHHHhHHHhhcccccCCCCHHHHHHH
Q 045533 158 LELHKEELNELTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLF 237 (242)
Q Consensus 158 Q~~hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tiiDD~yD~ygt~eEl~~f 237 (242)
|++||+||++++|||+++||.++|||||||++|||||++|++|||++|.+|+++||++++++++||+||+|||+|||++|
T Consensus 259 Q~~hq~EL~~l~rWwke~~L~~kl~faRdR~ve~Yfw~~a~~feP~~S~~Rl~~aK~~~litviDD~fD~ygT~eEl~~f 338 (569)
T 2j5c_A 259 QAQFQQELKEASRWWNSTGLVHELPFVRDRIVECYYWTTGVVERRQHGYERIMLTKINALVTTIDDVFDIYGTLEELQLF 338 (569)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHCC--CCCHHHHHHHHHHHCCCGGGHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHH
Confidence 99999999999999999999888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhC
Q 045533 238 TEAVQ 242 (242)
Q Consensus 238 t~av~ 242 (242)
|+||+
T Consensus 339 t~ai~ 343 (569)
T 2j5c_A 339 TTAIQ 343 (569)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99984
No 6
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=3.9e-89 Score=664.81 Aligned_cols=240 Identities=39% Similarity=0.687 Sum_probs=226.6
Q ss_pred ChHHHHHHHHhhhcC---CC--CCCChHHHHHHHHHHHhcCcccchhhhcccccccc-cccccchhcHHHHHhHHhhhcc
Q 045533 1 KEIEDAIQKLCPIYI---HS--NSPDLHTVSLHFRLLRQQGIKISCDVFEKFKDDEG-RFKSSLINDVQGMLSLYEAAYM 74 (242)
Q Consensus 1 ~EI~~~L~~i~~~~~---~~--~~~Dl~~~AL~FRLLR~~Gy~VS~DvF~~F~d~~G-~F~~~~~~d~~glL~LYeAS~l 74 (242)
+||+++|++||+.+. .. ...||++|||+|||||||||+||||||++|||++| +|++++.+|++|||||||||||
T Consensus 75 ~EI~~~L~~i~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~Vs~dvf~~Fk~~~g~~F~~~l~~d~~glL~LY~As~l 154 (549)
T 1n1b_A 75 DEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFL 154 (549)
T ss_dssp HHHHHHHHHHHHHCHHHHHCCCCSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSSBCGGGGGCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhhccccccccccCChhhchhhhhHHHhcCCCcCHHHHhhccCCCCCccchhhhhccHHHHHHHHHHhc
Confidence 499999999998631 11 14699999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCCccHHHHHHHHHHHHHHhHhhcC-CC-CCchHHHHHHhcCCCccCChhhhHHHHhHHhhhccCCCcccHHHHHHHHh
Q 045533 75 AVRGEHILDEAIAFTTTHLKSLVAQD-HV-TPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLHNKTLLNFAKL 152 (242)
Q Consensus 75 ~~~gE~iLdeA~~fs~~~L~~~~~~~-~~-~~~l~~~V~~aL~~P~~~~~~rle~r~yI~~Y~~~~~~~~n~~lLelAkl 152 (242)
++|||+|||||+.||++||++++.++ .+ +++|+++|+|||++|||+++||+|||+||++|+ +++++|++|||||||
T Consensus 155 ~~~gE~iL~eA~~Ft~~~L~~~~~~~~~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~--~~~~~n~~lLelAkl 232 (549)
T 1n1b_A 155 LRKGEDTLELAREFATKCLQKKLDEGGNEIDENLLLWIRHSLDLPLHWRIQSVEARWFIDAYA--RRPDMNPLIFELAKL 232 (549)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHTC------CHHHHHHHHHHHHSCGGGCCTTTSHHHHHHHHH--HCTTCCHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhcccccCCCcHHHHHHHHhcCchhcCchHHHHHHHHHHhc--ccccccHHHHHHHHH
Confidence 99999999999999999999998732 14 788999999999999999999999999999999 999999999999999
Q ss_pred hhHHHHHhhHHHHHHHHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHHHHHHHHhHHHhhcccccCCCCHH
Q 045533 153 DFNILLELHKEELNELTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLE 232 (242)
Q Consensus 153 DFn~~Q~~hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tiiDD~yD~ygt~e 232 (242)
|||+||++||+||++++|||+++||.++|||||||++|||||++|++|||++|.+|+++||++++++++||+||+|||+|
T Consensus 233 dFn~~Q~~hq~El~~l~rWwke~~l~~kl~faRdR~ve~Yfw~~a~~feP~~s~~Rl~~aK~~~l~tviDD~yD~~gt~e 312 (549)
T 1n1b_A 233 NFNIIQATHQQELKDLSRWWSRLCFPEKLPFVRDRLVESFFWAVGMFEPHQHGYQRKMAATIIVLATVIDDIYDVYGTLD 312 (549)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHCTTSCCCHHHHHHHHHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHHTTSCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHhccCCCHH
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhC
Q 045533 233 ELSLFTEAVQ 242 (242)
Q Consensus 233 El~~ft~av~ 242 (242)
||+.||+||+
T Consensus 313 El~~ft~ai~ 322 (549)
T 1n1b_A 313 ELELFTDTFK 322 (549)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 7
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=5.5e-87 Score=670.77 Aligned_cols=239 Identities=33% Similarity=0.625 Sum_probs=223.8
Q ss_pred ChHHHHHHHHhhhcCC-----C---CCCChHHHHHHHHHHHhcCcccchhhhcccccccccccccc---hhcHHHHHhHH
Q 045533 1 KEIEDAIQKLCPIYIH-----S---NSPDLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSL---INDVQGMLSLY 69 (242)
Q Consensus 1 ~EI~~~L~~i~~~~~~-----~---~~~Dl~~~AL~FRLLR~~Gy~VS~DvF~~F~d~~G~F~~~~---~~d~~glL~LY 69 (242)
+||+++|+++|+.+.. + ...||++|||+|||||||||+||||||++|+|++|+|++++ .+|++||||||
T Consensus 291 ~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~d~~g~F~~~~~e~~~dv~g~L~LY 370 (785)
T 3s9v_A 291 EEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVN 370 (785)
T ss_dssp HHHHHHHHHHHTTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCSSTTCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccccccCCCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCCeeeccccccccccccHHHH
Confidence 4999999999987421 1 13699999999999999999999999999999999999855 69999999999
Q ss_pred hhhccCCCCccHHHHHHHHHHHHHHhHhhcC------CCCCchHHHHHHhcCCCccCChhhhHHHHhHHhhhccCCCc--
Q 045533 70 EAAYMAVRGEHILDEAIAFTTTHLKSLVAQD------HVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHL-- 141 (242)
Q Consensus 70 eAS~l~~~gE~iLdeA~~fs~~~L~~~~~~~------~~~~~l~~~V~~aL~~P~~~~~~rle~r~yI~~Y~~~~~~~-- 141 (242)
|||||++|||+|||||+.||++||++++.++ .++++|+++|+|||++|||+++||+|||+||++|+ +++.
T Consensus 371 eAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~d~~~~~~~L~~eV~~aL~~P~~~~l~RleaR~yI~~Y~--~~~~~i 448 (785)
T 3s9v_A 371 RCSHVSFPGETIMEEAKLCTERYLRNALENVDAFDKWAFKKNIRGEVEYALKYPWHKSMPRLEARSYIENYG--PDDVWL 448 (785)
T ss_dssp HHHTSCCTTCHHHHHHHHHHHHHHHHHTTTCCTTCTTCSSSCHHHHHHHHHHSCGGGCCHHHHHHHHHHHCC--TTCCEE
T ss_pred hHhhcCCCCcHHHHHHHHHHHHHHHHHHhccccccccccCCcHHHHHHHHhCCccccCchHHHHHHHHHHhc--ccchhh
Confidence 9999999999999999999999999987643 25678999999999999999999999999999999 7765
Q ss_pred ----------ccHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHHHH
Q 045533 142 ----------HNKTLLNFAKLDFNILLELHKEELNELTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIM 211 (242)
Q Consensus 142 ----------~n~~lLelAklDFn~~Q~~hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~ 211 (242)
+|++||||||||||+||++||+||++++|||+++|+ .+|||||||+||||||++|++||||||.+|++|
T Consensus 449 ~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~~~ 527 (785)
T 3s9v_A 449 GKTVYMMPYISNEKYLELAKLDFNKVQSIHQTELQDLRRWWKSSGF-TDLNFTRERVTEIYFSPASFIFEPEFSKCREVY 527 (785)
T ss_dssp SSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-TSCSSSCCCHHHHHHHHHHHSCSGGGHHHHHHH
T ss_pred hcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHcCC-CcCccHHHHHHHHHHHHHHhcCCccchHHHHHH
Confidence 499999999999999999999999999999999999 699999999999999999999999999999999
Q ss_pred HHHHhHHHhhcccccCCCCHHHHHHHHHhhC
Q 045533 212 TQLNYILSIIDDTYDAYGTLEELSLFTEAVQ 242 (242)
Q Consensus 212 aK~~~l~tiiDD~yD~ygt~eEl~~ft~av~ 242 (242)
||+++|+|+|||+||+|||+|||++||+||+
T Consensus 528 aK~~~l~tviDD~yD~ygT~eEl~~ft~ai~ 558 (785)
T 3s9v_A 528 TKTSNFTVILDDLYDAHGSLDDLKLFTESVK 558 (785)
T ss_dssp HHHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999985
No 8
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=1.2e-86 Score=670.60 Aligned_cols=239 Identities=38% Similarity=0.666 Sum_probs=221.0
Q ss_pred ChHHHHHHHHhhhcCC-----C---CCCChHHHHHHHHHHHhcCcccchhhhcccccccccccccc---hhcHHHHHhHH
Q 045533 1 KEIEDAIQKLCPIYIH-----S---NSPDLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKSSL---INDVQGMLSLY 69 (242)
Q Consensus 1 ~EI~~~L~~i~~~~~~-----~---~~~Dl~~~AL~FRLLR~~Gy~VS~DvF~~F~d~~G~F~~~~---~~d~~glL~LY 69 (242)
+||+++|+++|+.+.. + ...||++|||+|||||||||+||||||++|+|++|+|++++ .+|++||||||
T Consensus 319 ~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~d~~g~F~~~~~~~~~dv~gmL~LY 398 (817)
T 3sdr_A 319 KEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIFDNFKDANGKFICSTGQFNKDVASMLNLY 398 (817)
T ss_dssp HHHHHHHHHHHHHCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCC--CBCCCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHHHHcCCCccHhHHHHHhhcCCCceechhhhchhhHHHHHHH
Confidence 4999999999987421 1 13599999999999999999999999999999999999854 69999999999
Q ss_pred hhhccCCCCccHHHHHHHHHHHHHHhHhhcCC-C-----CCchHHHHHHhcCCCccCChhhhHHHHhHHhhhccCCCc--
Q 045533 70 EAAYMAVRGEHILDEAIAFTTTHLKSLVAQDH-V-----TPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHL-- 141 (242)
Q Consensus 70 eAS~l~~~gE~iLdeA~~fs~~~L~~~~~~~~-~-----~~~l~~~V~~aL~~P~~~~~~rle~r~yI~~Y~~~~~~~-- 141 (242)
|||||++|||+|||||+.||++||++++.++. + +++|+++|+|||++|||+++||+|||+||++|+ +++.
T Consensus 399 eAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~~~~~~~~~L~~eV~~aL~~P~~~~l~Rlear~yI~~Y~--~~~~~i 476 (817)
T 3sdr_A 399 RASQLAFPGENILDEAKSFATKYLREALEKSETSSAWNNKQNLSQEIKYALKTSWHASVPRVEAKRYCQVYR--PDYARI 476 (817)
T ss_dssp HHHTTCCTTCHHHHHHHHHHHHHHHHHHTSGGGGSHHHHHTTHHHHHHHHHHCCSTTCCHHHHHHHHHTTCC--TTCCEE
T ss_pred HHHhcCCCChHHHHHHHHHHHHHHHHHHhccccccccccCCcHHHHHHHHhcCchhccChHHHHHHHHHHhC--ccchhh
Confidence 99999999999999999999999999876432 2 367999999999999999999999999999999 7765
Q ss_pred ----------ccHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHHHH
Q 045533 142 ----------HNKTLLNFAKLDFNILLELHKEELNELTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIM 211 (242)
Q Consensus 142 ----------~n~~lLelAklDFn~~Q~~hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~ 211 (242)
+|++||||||||||+||++||+||++++|||+++|+ .+|||||||+||||||++|++||||||.+|++|
T Consensus 477 ~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~~~ 555 (817)
T 3sdr_A 477 AKCVYKLPYVNNEKFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGL-PLFTFARERPLEFYFLVAAGTYEPQYAKCRFLF 555 (817)
T ss_dssp SSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSG-GGCTTSCCCHHHHHHHHHTTSCCGGGHHHHHHH
T ss_pred hhhcccccccccHHHHHHHHHHHHHHHHHhhhhhhhhceeHHhcCC-CcCccHHHHHHHHHHHHHHhccCccchHHHHHH
Confidence 499999999999999999999999999999999999 699999999999999999999999999999999
Q ss_pred HHHHhHHHhhcccccCCCCHHHHHHHHHhhC
Q 045533 212 TQLNYILSIIDDTYDAYGTLEELSLFTEAVQ 242 (242)
Q Consensus 212 aK~~~l~tiiDD~yD~ygt~eEl~~ft~av~ 242 (242)
||+++|+|+|||+||+|||+|||++||+||+
T Consensus 556 aK~~~l~tviDD~yD~ygT~eEl~~ft~ai~ 586 (817)
T 3sdr_A 556 TKVACLQTVLDDMYDTYGTLDELKLFTEAVR 586 (817)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999985
No 9
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=6.8e-86 Score=661.29 Aligned_cols=237 Identities=35% Similarity=0.620 Sum_probs=222.1
Q ss_pred ChHHHHHHHHhhhcCC-----C-C--CCChHHHHHHHHHHHhcCcccchhhhcccccccccccc---cchhcHHHHHhHH
Q 045533 1 KEIEDAIQKLCPIYIH-----S-N--SPDLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKS---SLINDVQGMLSLY 69 (242)
Q Consensus 1 ~EI~~~L~~i~~~~~~-----~-~--~~Dl~~~AL~FRLLR~~Gy~VS~DvF~~F~d~~G~F~~---~~~~d~~glL~LY 69 (242)
+||+++|+++|+.+.. + . ..||++|||+|||||||||+||||||++|+|++|+|++ ++.+|++||||||
T Consensus 267 ~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~d~~g~F~~~~~~~~~dv~gmL~LY 346 (764)
T 3p5p_A 267 QEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVLNNFKDENGRFFSSAGQTHVELRSVVNLF 346 (764)
T ss_dssp HHHHHHHHHHHHTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCSCTTCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHHHhcCCCccHhHHHhhhcCCCCccccccccccccHHHHHHH
Confidence 4999999999987421 1 1 35999999999999999999999999999999999986 4689999999999
Q ss_pred hhhccCCCCccHHHHHHHHHHHHHHhHhhc-CCCCCchHHHHHHhcCCCccCChhhhHHHHhHHhhhccCCCc-------
Q 045533 70 EAAYMAVRGEHILDEAIAFTTTHLKSLVAQ-DHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHL------- 141 (242)
Q Consensus 70 eAS~l~~~gE~iLdeA~~fs~~~L~~~~~~-~~~~~~l~~~V~~aL~~P~~~~~~rle~r~yI~~Y~~~~~~~------- 141 (242)
|||||++|||+|||||+.||++||++++.+ +.++++|+++|+|||++|||+++||+|||+||++|+ +++.
T Consensus 347 eAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~L~~eV~~aL~~P~~~~l~Rlear~yI~~Y~--~~~~~i~Kt~y 424 (764)
T 3p5p_A 347 RASDLAFPDERAMDDARKFAEPYLREALATKISTNTKLFKEIEYVVEYPWHMSIPRLEARSYIDSYD--DNYVWQRKTLY 424 (764)
T ss_dssp HHHTTCCTTCHHHHHHHHHHHHHHHHHHHHTSCSSSHHHHHHHHHHHSCGGGCCHHHHHHHHHHHCC--TTCCEESSSEE
T ss_pred HHHhCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHhcCchhccchHHHHHHHHHHhc--ccchhhhcccc
Confidence 999999999999999999999999998764 246788999999999999999999999999999999 7765
Q ss_pred -----ccHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHHHHHHHHh
Q 045533 142 -----HNKTLLNFAKLDFNILLELHKEELNELTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNY 216 (242)
Q Consensus 142 -----~n~~lLelAklDFn~~Q~~hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~ 216 (242)
+|++||||||||||+||++||+||++|+|||+++|+ .+|||||||+||||||++| |||+||.+|++|||+++
T Consensus 425 r~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~l~rWwk~~~l-~~l~faRdr~ve~Yfw~~~--feP~~s~~R~~~aK~~~ 501 (764)
T 3p5p_A 425 RMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGM-ADINFTRHRVAEVYFSSAT--FEPEYSATRIAFTKIGC 501 (764)
T ss_dssp CCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTST-TTTTCCHHHHHHHHHHTCC--CCGGGHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHHHhHHHhhhhceeHHhcCC-CcCccHHHHHHHHHHHHHh--CCccchHHHHHHHHHHH
Confidence 499999999999999999999999999999999999 6999999999999999999 99999999999999999
Q ss_pred HHHhhcccccCCCCHHHHHHHHHhhC
Q 045533 217 ILSIIDDTYDAYGTLEELSLFTEAVQ 242 (242)
Q Consensus 217 l~tiiDD~yD~ygt~eEl~~ft~av~ 242 (242)
|+|+|||+||+|||+|||++||+||+
T Consensus 502 l~tviDD~yD~ygT~eEl~~ft~ai~ 527 (764)
T 3p5p_A 502 LQVLFDDMADIFATLDELKSFTEGVK 527 (764)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCCHHHHHHHHHHHH
Confidence 99999999999999999999999985
No 10
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=100.00 E-value=1.2e-84 Score=648.05 Aligned_cols=236 Identities=26% Similarity=0.484 Sum_probs=218.9
Q ss_pred ChHHHHHHHHhhhcC-C----C---CCCChHHHHHHHHHHHhcCcccchhhhcccccccccccc---cchhcHHHHHhHH
Q 045533 1 KEIEDAIQKLCPIYI-H----S---NSPDLHTVSLHFRLLRQQGIKISCDVFEKFKDDEGRFKS---SLINDVQGMLSLY 69 (242)
Q Consensus 1 ~EI~~~L~~i~~~~~-~----~---~~~Dl~~~AL~FRLLR~~Gy~VS~DvF~~F~d~~G~F~~---~~~~d~~glL~LY 69 (242)
+||+++|+++|+.|. . . ...||++|||+|||||||||+||||||++|+ ++|+|++ +..+|++|||+||
T Consensus 266 ~EI~~~L~~i~~~~~~~g~~~~~~~~~~DL~~tAL~FRLLRqhGy~VS~DvF~~Fk-~~G~F~~~~~e~~~Dv~glLsLY 344 (727)
T 3pya_A 266 EEIKECLDYVHRYWTDNGICWARCSHVQDIDDTAMAFRLLRQHGYQVSADVFKNFE-KEGEFFCFVGQSNQAVTGMFNLY 344 (727)
T ss_dssp HHHHHHHHHHHHTCCTTCCCSSSSCSCCCHHHHHHHHHHHHHTTCCCCGGGGGGGE-ETTEECSSTTCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcccccCCCCCCHHHHHHHHHHHHhCCCCCCHHHHHhcc-CCCcccccccccccccHHHHHHH
Confidence 499999999998642 1 1 1359999999999999999999999999999 8899984 3468999999999
Q ss_pred hhhccCCCCccHHHHHHHHHHHHHHhHhhcCCC------CCchHHHHHHhcCCCccCChhhhHHHHhHHhhhccCCCc--
Q 045533 70 EAAYMAVRGEHILDEAIAFTTTHLKSLVAQDHV------TPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHL-- 141 (242)
Q Consensus 70 eAS~l~~~gE~iLdeA~~fs~~~L~~~~~~~~~------~~~l~~~V~~aL~~P~~~~~~rle~r~yI~~Y~~~~~~~-- 141 (242)
|||||++|||+|||||+.||++||++.+.++.+ +++|+++|+|||++|||+++||+|||+||++|+ ++++
T Consensus 345 eAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~dkw~~~~~L~~~V~~aL~~P~~~~l~RleaR~yI~~Y~--~~~~~~ 422 (727)
T 3pya_A 345 RASQLAFPREEILKNAKEFSYNYLLEKREREELIDKWIIMKDLPGEIGFALEIPWYASLPRVETRFYIDQYG--GENDVW 422 (727)
T ss_dssp HHHTTCCTTCHHHHHHHHHHHHHHHHHHHTTCCCCSSEECSCHHHHHHHHHHSCGGGCCHHHHHHHHHHHCC--GGGCEE
T ss_pred HHHHcCCCchHHHHHHHHHHHHHHHHHHhcCCcccccccCCcHHHHHHHHhcCcHhcCChHHHHHHHHHHhc--cCcchh
Confidence 999999999999999999999999998765443 478999999999999999999999999999999 6554
Q ss_pred -----------ccHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHHH
Q 045533 142 -----------HNKTLLNFAKLDFNILLELHKEELNELTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKI 210 (242)
Q Consensus 142 -----------~n~~lLelAklDFn~~Q~~hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~ 210 (242)
+|++||||||+|||+||++||+||++|+||||++|| .+|||||||+||||||++|++||||||.+|++
T Consensus 423 i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~~ 501 (727)
T 3pya_A 423 IGKTLYRMPYVNNNGYLELAKQDYNNCQAQHQLEWDIFQKWYEENRL-SEWGVRRSELLECYYLAAATIFESERSHERMV 501 (727)
T ss_dssp ESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTG-GGGTCCHHHHHHHHHHHHTTSCCGGGHHHHHH
T ss_pred hhhhhccccccccHHHHHHHHHhHHHHHHHhHHHHhhhheeHHhcCc-ccCCchhhHHHHHHHHHHhccCCchhHHHHHH
Confidence 699999999999999999999999999999999999 56999999999999999999999999999999
Q ss_pred HHHHHhHHHhhcccccCCCCHHHHHHHHHhhC
Q 045533 211 MTQLNYILSIIDDTYDAYGTLEELSLFTEAVQ 242 (242)
Q Consensus 211 ~aK~~~l~tiiDD~yD~ygt~eEl~~ft~av~ 242 (242)
|||+++|+|+|||+||+|| |||++||+||+
T Consensus 502 ~aK~~~l~tviDD~yD~yG--eEl~~ft~av~ 531 (727)
T 3pya_A 502 WAKSSVLVKAISSSFGESS--DSRRSFSDQFH 531 (727)
T ss_dssp HHHHHHHHHHHHHHHCSSH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcch--HHHHHHHHHHH
Confidence 9999999999999999999 99999999983
No 11
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=99.64 E-value=6.1e-17 Score=146.37 Aligned_cols=83 Identities=18% Similarity=0.205 Sum_probs=74.9
Q ss_pred HHhhHHHHHH-HHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHH-HHHHHHhHHHhhcccccCC--CCHHH
Q 045533 158 LELHKEELNE-LTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRK-IMTQLNYILSIIDDTYDAY--GTLEE 233 (242)
Q Consensus 158 Q~~hq~EL~~-lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~-~~aK~~~l~tiiDD~yD~y--gt~eE 233 (242)
.+.|.+|+++ +++||+++|+.+ .||+|+|+++||||.++++++|+++.+|+ ++||.+++++++||+||.| ||++|
T Consensus 15 ~~p~~~e~~~~~~~W~~~~~l~~-~~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~ak~~~~~~~~DD~~D~~~~~~~ee 93 (337)
T 1ps1_A 15 QSPDHARAEAEQLAWPRSLGLIR-SDAAAERHLRGGYADLASRFYPHATGADLDLGVDLMSWFFLFDDLFDGPRGENPED 93 (337)
T ss_dssp CCTTHHHHHHSTTHHHHHTTSCC-SHHHHHHHHTTCHHHHHHHHCTTCCTHHHHHHHHHHHHHHHHHHTTSSGGGGCHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCC-CHHHHHHHHhCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHhhccCCcCCCCHHH
Confidence 3456677754 456999999964 69999999999999999999999999999 9999999999999999999 69999
Q ss_pred HHHHHHhh
Q 045533 234 LSLFTEAV 241 (242)
Q Consensus 234 l~~ft~av 241 (242)
++.||+++
T Consensus 94 ~~~~~~~l 101 (337)
T 1ps1_A 94 TKQLTDQV 101 (337)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999987
No 12
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A*
Probab=99.62 E-value=2.5e-16 Score=141.34 Aligned_cols=82 Identities=21% Similarity=0.190 Sum_probs=73.4
Q ss_pred HHhhHHHHHHH-HHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHH-HHHHHHhHHHhhcccccCCCCHHHHH
Q 045533 158 LELHKEELNEL-TKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRK-IMTQLNYILSIIDDTYDAYGTLEELS 235 (242)
Q Consensus 158 Q~~hq~EL~~l-srWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~-~~aK~~~l~tiiDD~yD~ygt~eEl~ 235 (242)
.+.|.+|+++. .+||+++|+..+ ||+|+|+++||||.++++++|+++.+|+ ++||.+++++++||+||. ||++|++
T Consensus 25 ~~p~~~e~~~~~~~W~~~~~l~~~-~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~ak~~~~~~~~DD~~D~-~~~~e~~ 102 (320)
T 3bny_A 25 CHPLVEEVSKEVDGYFLQHWNFPN-EKARKKFVAAGFSRVTCLYFPKALDDRIHFACRLLTVLFLIDDLLEY-MSFEEGS 102 (320)
T ss_dssp CCTTHHHHHHHHHHHHHHHSCCSS-HHHHHHHHHHCHHHHHHHHCTTSCTTTHHHHHHHHHHHHHHHHHHTT-SCHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHcCCCCC-hHHHHHHHhcCchhhHhhhCCCCCHHHHHHHHHHHHHHHHhhccccc-CChhhHH
Confidence 34567777655 456699999755 9999999999999999999999999999 899999999999999999 8999999
Q ss_pred HHHHhh
Q 045533 236 LFTEAV 241 (242)
Q Consensus 236 ~ft~av 241 (242)
.||+++
T Consensus 103 ~~~~~l 108 (320)
T 3bny_A 103 AYNEKL 108 (320)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 13
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A
Probab=99.60 E-value=3.2e-16 Score=139.10 Aligned_cols=80 Identities=13% Similarity=0.120 Sum_probs=72.4
Q ss_pred hhHHHHHHH-HHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHH-HHHHHHhHHHhhcccccCCCCHHHHHHH
Q 045533 160 LHKEELNEL-TKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRK-IMTQLNYILSIIDDTYDAYGTLEELSLF 237 (242)
Q Consensus 160 ~hq~EL~~l-srWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~-~~aK~~~l~tiiDD~yD~ygt~eEl~~f 237 (242)
-|.+|+++. .+||+++|+. ++||+|+|++++|||.++++++|+++.+|+ ++||.+++++++||+||. ||++|++.|
T Consensus 13 P~~~~~~~~~~~W~~~~~l~-~~~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~~k~~~~~~~~DD~~D~-~~~~e~~~~ 90 (300)
T 1di1_A 13 PRVKEVQDEVDGYFLENWKF-PSFKAVRTFLDAKFSEVTCLYFPLALDDRIHFACRLLTVLFLIDDVLEH-MSFADGEAY 90 (300)
T ss_dssp TTHHHHHHHHHHHHHHHSCC-SSHHHHHHHHHHCHHHHHHHHCTTSCTTTHHHHHHHHHHHHHHHHHHHH-SCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCC-CCHHHHHHHHhcCcchhhhhcCCCCCHHHHHHHHHHHHHHHHHHhcccc-CCHHHHHHH
Confidence 466777664 5566999996 679999999999999999999999999999 999999999999999999 899999999
Q ss_pred HHhh
Q 045533 238 TEAV 241 (242)
Q Consensus 238 t~av 241 (242)
|+++
T Consensus 91 ~~~~ 94 (300)
T 1di1_A 91 NNRL 94 (300)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
No 14
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A*
Probab=99.13 E-value=2.3e-11 Score=112.81 Aligned_cols=73 Identities=10% Similarity=0.020 Sum_probs=68.0
Q ss_pred HHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCchhHHH-HHHHHHhHHHhhcccccC--CC-CHHHHHHHHHhh
Q 045533 168 LTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRK-IMTQLNYILSIIDDTYDA--YG-TLEELSLFTEAV 241 (242)
Q Consensus 168 lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~-~~aK~~~l~tiiDD~yD~--yg-t~eEl~~ft~av 241 (242)
+.+||+++|+. .-+++|+|+++||||.+++++.|+++..|+ ++||.+++++++||+||. +| +++|++.|++++
T Consensus 66 ~~~W~~~~gl~-~~~~~r~r~~~~~~~~laa~~~P~as~erL~l~a~~~~w~f~~DD~~D~~~~g~~~~~~~~~~~~l 142 (382)
T 3kb9_A 66 TRTWLLEKRLM-PADKVEEYADGLCYTDLMAGYYLGAPDEVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGLL 142 (382)
T ss_dssp HHHHHHHTTSS-CHHHHHHHHHHHCHHHHHHTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCC-CCHHHHHHHHhCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhhcccccccccCHHHHHHHHHHH
Confidence 67899999995 448999999999999999999999999999 999999999999999997 66 999999999876
No 15
>1yyq_A Trichodiene synthase; terpenoid cyclase fold, site-directed mutant, pyrophosphate, lyase; 2.10A {Fusarium sporotrichioides} PDB: 1yj4_A 1yyr_A* 1yys_A* 1jfa_A 1jfg_A 2q9y_A* 2q9z_A 2ael_A* 2aek_A* 2aet_A 2ps7_A 2ps8_A 1kiy_A 1kiz_A 1yyt_A* 1yyu_A* 2ps5_A 2ps4_A 2ps6_A
Probab=44.91 E-value=36 Score=31.06 Aligned_cols=54 Identities=6% Similarity=-0.113 Sum_probs=35.3
Q ss_pred hhHHHHHHHHhhccccCCCchhHHHHHHHHHhHHHhhcccccCCCCHHHHHHHHHh
Q 045533 185 RDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELSLFTEA 240 (242)
Q Consensus 185 Rdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tiiDD~yD~ygt~eEl~~ft~a 240 (242)
.++.+.+=.|.++..|.--=......+++...++.++||.+|.-+ +++..|.+.
T Consensus 63 l~~~~~t~~~laar~YP~a~~e~l~liad~~~~~F~lDD~~d~~~--~~l~~~~~~ 116 (374)
T 1yyq_A 63 LQASLQTIVGMVVYSWAKVSKECMADLSIHYTYTLVLDDSKDDPY--PTMVNYFDD 116 (374)
T ss_dssp HHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHTTCCSCSH--HHHTTHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHhhcccccCcH--HHHHHHHHH
Confidence 344455555544444433334567788999999999999998543 666666553
No 16
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A*
Probab=31.91 E-value=33 Score=31.90 Aligned_cols=62 Identities=15% Similarity=0.149 Sum_probs=36.6
Q ss_pred HHHHHHHhhcCCCCCCcchhHHHHHHHHhhccccCCCc-hhHHH-HHHHHHhHHHhhcccc-cCCC
Q 045533 167 ELTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQY-AFGRK-IMTQLNYILSIIDDTY-DAYG 229 (242)
Q Consensus 167 ~lsrWw~~~~l~~~L~faRdr~ve~yfw~~~~~feP~~-s~~R~-~~aK~~~l~tiiDD~y-D~yg 229 (242)
++..|-.+.++... +-.|.+...+=|--++.+.=|.= +..|+ ..+|......++||.| |..|
T Consensus 134 ~~~~W~~~~~~l~~-~~~~~~~~~~~~~llaa~~yP~A~~~e~L~l~ad~~~W~F~~DD~~~D~~g 198 (433)
T 3v1v_A 134 RIKRWAEDEVQLYP-EEWEGQFDGFSVGRYMVGCHPDAPTVDHLMLATRLMVAENAVDDCYCEDHG 198 (433)
T ss_dssp HHHHHHHHTSCCCC-----CCSCHHHHHHHHHHHCTTCSSHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHcCCCCC-HHHHHHHHhcCHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhhhhhccC
Confidence 45678887765222 22344444444444444455655 56776 6789999999999995 9866
No 17
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=31.66 E-value=8.3 Score=31.20 Aligned_cols=21 Identities=24% Similarity=0.192 Sum_probs=17.5
Q ss_pred HHhhcccccCCCCHHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLFT 238 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~ft 238 (242)
+.+|||+++.++|+.++....
T Consensus 120 VLLVDDVitTG~Tl~aa~~~L 140 (186)
T 1l1q_A 120 VLLHDDVLATGGTLLAAIELC 140 (186)
T ss_dssp EEEEEEEESSSHHHHHHHHHH
T ss_pred EEEEecccccHHHHHHHHHHH
Confidence 457999999999999986543
No 18
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=30.13 E-value=31 Score=20.64 Aligned_cols=13 Identities=46% Similarity=0.457 Sum_probs=11.1
Q ss_pred CCCCHHHHHHHHH
Q 045533 227 AYGTLEELSLFTE 239 (242)
Q Consensus 227 ~ygt~eEl~~ft~ 239 (242)
+.||+|||..+-+
T Consensus 10 vggtpeelkklke 22 (36)
T 2ki0_A 10 VGGTPEELKKLKE 22 (36)
T ss_dssp BCCCHHHHHHHHH
T ss_pred ecCCHHHHHHHHH
Confidence 6899999998865
No 19
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=30.02 E-value=9.2 Score=30.29 Aligned_cols=21 Identities=10% Similarity=0.240 Sum_probs=17.4
Q ss_pred HHhhcccccCCCCHHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLFT 238 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~ft 238 (242)
+.+|||+++.++|+.++....
T Consensus 123 VllVDDvitTG~Tl~~~~~~L 143 (175)
T 1vch_A 123 VVLVSDVVASGETMRAMEKMV 143 (175)
T ss_dssp EEEEEEEESSSHHHHHHHHHH
T ss_pred EEEEeccccchHHHHHHHHHH
Confidence 456999999999999986543
No 20
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=28.81 E-value=14 Score=28.95 Aligned_cols=20 Identities=30% Similarity=0.385 Sum_probs=16.4
Q ss_pred HHhhcccccCCCCHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLF 237 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~f 237 (242)
+.++||+.|.+||+..+...
T Consensus 84 VliVDDii~TG~Tl~~a~~~ 103 (152)
T 1nul_A 84 FIVIDDLVDTGGTAVAIREM 103 (152)
T ss_dssp EEEEEEEECTTSSHHHHHHH
T ss_pred EEEEEeecCchHHHHHHHHH
Confidence 45699999999999887653
No 21
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=27.88 E-value=10 Score=30.66 Aligned_cols=21 Identities=24% Similarity=0.164 Sum_probs=17.5
Q ss_pred HHhhcccccCCCCHHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLFT 238 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~ft 238 (242)
+.+|||+++.++|+.++....
T Consensus 123 VllVDDvitTG~Tl~~a~~~L 143 (197)
T 1y0b_A 123 VLIIDDFLANGQAAHGLVSIV 143 (197)
T ss_dssp EEEEEEEESSCHHHHHHHHHH
T ss_pred EEEEEcccccCHHHHHHHHHH
Confidence 457999999999999986543
No 22
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=26.85 E-value=10 Score=29.19 Aligned_cols=21 Identities=33% Similarity=0.273 Sum_probs=17.2
Q ss_pred HHhhcccccCCCCHHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLFT 238 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~ft 238 (242)
+.++||+++.++|+.++....
T Consensus 86 VllVDDvitTG~Tl~~a~~~L 106 (153)
T 1vdm_A 86 VVIVDDVSDTGKTLEVVIEEV 106 (153)
T ss_dssp EEEEEEEESSCHHHHHHHHHH
T ss_pred EEEEecccCChHHHHHHHHHH
Confidence 456999999999999886554
No 23
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=24.88 E-value=13 Score=30.10 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=17.5
Q ss_pred HHhhcccccCCCCHHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLFT 238 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~ft 238 (242)
+.+|||+++..+|+.++....
T Consensus 129 VLlVDDvitTG~Tl~~a~~~L 149 (190)
T 2dy0_A 129 VLVVDDLLATGGTIEATVKLI 149 (190)
T ss_dssp EEEEEEEESSCHHHHHHHHHH
T ss_pred EEEEEccccchHHHHHHHHHH
Confidence 457999999999999986554
No 24
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=24.57 E-value=13 Score=29.96 Aligned_cols=21 Identities=19% Similarity=0.268 Sum_probs=17.4
Q ss_pred HHhhcccccCCCCHHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLFT 238 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~ft 238 (242)
+.+|||+++.++|+.++....
T Consensus 125 VLlVDDvitTG~Tl~~~~~~L 145 (187)
T 1g2q_A 125 VIIVDDIIATGGSAAAAGELV 145 (187)
T ss_dssp EEEEEEEESSCHHHHHHHHHH
T ss_pred EEEECCCcccHHHHHHHHHHH
Confidence 457999999999999986543
No 25
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=24.43 E-value=13 Score=29.65 Aligned_cols=21 Identities=14% Similarity=0.014 Sum_probs=17.4
Q ss_pred HHhhcccccCCCCHHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLFT 238 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~ft 238 (242)
+.+|||+++.++|+.++....
T Consensus 99 VllVDDvitTG~Tl~~a~~~L 119 (181)
T 1ufr_A 99 IVLVDDVLYTGRTARAALDAL 119 (181)
T ss_dssp EEEEEEEESSSHHHHHHHHHH
T ss_pred EEEEecCCCcHHHHHHHHHHH
Confidence 456999999999999986543
No 26
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=24.32 E-value=13 Score=29.51 Aligned_cols=21 Identities=14% Similarity=-0.007 Sum_probs=17.4
Q ss_pred HHhhcccccCCCCHHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLFT 238 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~ft 238 (242)
+.+|||+++.++|+.++....
T Consensus 101 VllVDDvitTG~Tl~~a~~~L 121 (181)
T 1a3c_A 101 VILVDDVLYTGRTVRAGMDAL 121 (181)
T ss_dssp EEEEEEEESSSHHHHHHHHHH
T ss_pred EEEEeCccCcHHHHHHHHHHH
Confidence 457999999999999986543
No 27
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=23.55 E-value=14 Score=29.40 Aligned_cols=21 Identities=19% Similarity=0.335 Sum_probs=17.3
Q ss_pred HHhhcccccCCCCHHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLFT 238 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~ft 238 (242)
+.+|||+++.++|+.++....
T Consensus 123 VllVDDvitTG~Tl~~~~~~L 143 (180)
T 1zn8_A 123 VVVVDDLLATGGTMNAACELL 143 (180)
T ss_dssp EEEEEEEESSSHHHHHHHHHH
T ss_pred EEEEcCCcccHHHHHHHHHHH
Confidence 456999999999999986543
No 28
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=23.49 E-value=14 Score=29.59 Aligned_cols=21 Identities=10% Similarity=0.118 Sum_probs=17.3
Q ss_pred HHhhcccccCCCCHHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLFT 238 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~ft 238 (242)
+.+|||+.|..+|+.++....
T Consensus 109 VllVDDvitTG~Tl~~~~~~L 129 (178)
T 2yzk_A 109 VVVVDDVATTGTSIAKSIEVL 129 (178)
T ss_dssp EEEEEEEESSSHHHHHHHHHH
T ss_pred EEEEEeccCCcHHHHHHHHHH
Confidence 456999999999999886544
No 29
>1tzy_D Histone H4-VI; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1f66_B 1eqz_D 1hq3_D 1u35_B 2aro_D 2cv5_B* 2f8n_B 3nqu_B 3r45_B 3azg_B 3a6n_B 3an2_B 3av1_B 3av2_B 3ayw_B 3aze_B 3azf_B 3afa_B 3azh_B 3azk_B ...
Probab=22.37 E-value=29 Score=25.77 Aligned_cols=44 Identities=27% Similarity=0.550 Sum_probs=28.5
Q ss_pred HHHHHHHHHhcCc-ccchhhhcccccccccccccchhcHHHHHhHHhhhccCCCCccHHHHHHHHHHH
Q 045533 25 VSLHFRLLRQQGI-KISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTT 91 (242)
Q Consensus 25 ~AL~FRLLR~~Gy-~VS~DvF~~F~d~~G~F~~~~~~d~~glL~LYeAS~l~~~gE~iLdeA~~fs~~ 91 (242)
.+-.=||+|..|+ .||.|+.... .+.|+-|= +.|+++|..||++
T Consensus 32 ~~~I~Rlar~~G~~rIs~~a~~~l---------------~~vle~~~--------~~V~~dA~~~a~h 76 (103)
T 1tzy_D 32 KPAIRRLARRGGVKRISGLIYEET---------------RGVLKVFL--------ENVIRDAVTYTEH 76 (103)
T ss_dssp HHHHHHHHHHTTCCEECTTHHHHH---------------HHHHHHHH--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCccccCHHHHHHH---------------HHHHHHHH--------HHHHHHHHHHHHH
Confidence 3334488898888 4777776543 33333221 5699999999875
No 30
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=22.35 E-value=16 Score=29.34 Aligned_cols=21 Identities=10% Similarity=-0.009 Sum_probs=17.4
Q ss_pred HHhhcccccCCCCHHHHHHHH
Q 045533 218 LSIIDDTYDAYGTLEELSLFT 238 (242)
Q Consensus 218 ~tiiDD~yD~ygt~eEl~~ft 238 (242)
+.+|||+.+..+|+.++....
T Consensus 117 VllVDDvitTG~Tl~~~~~~L 137 (180)
T 2p1z_A 117 VLVVEDTTTTGNSPLTAVKAL 137 (180)
T ss_dssp EEEEEEECSSSHHHHHHHHHH
T ss_pred EEEEEeccCCcHHHHHHHHHH
Confidence 467999999999999886543
No 31
>2yfw_B Histone H4, H4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.60A {Kluyveromyces lactis nrrl y-1140}
Probab=22.35 E-value=29 Score=25.80 Aligned_cols=43 Identities=26% Similarity=0.511 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCc-ccchhhhcccccccccccccchhcHHHHHhHHhhhccCCCCccHHHHHHHHHHH
Q 045533 26 SLHFRLLRQQGI-KISCDVFEKFKDDEGRFKSSLINDVQGMLSLYEAAYMAVRGEHILDEAIAFTTT 91 (242)
Q Consensus 26 AL~FRLLR~~Gy-~VS~DvF~~F~d~~G~F~~~~~~d~~glL~LYeAS~l~~~gE~iLdeA~~fs~~ 91 (242)
+-.=||+|..|+ .||.|+.... ...|+-|= |.|+++|..||++
T Consensus 33 ~~I~Rlar~~G~~rIs~~a~~~l---------------~~vle~~~--------~~V~~dA~~~a~h 76 (103)
T 2yfw_B 33 PAIRRLARRGGVKRISGLIYEEV---------------RNVLKTFL--------ESVIRDAVTYTEH 76 (103)
T ss_dssp HHHHHHHHHTTCCEECTTHHHHH---------------HHHHHHHH--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCccccCHHHHHHH---------------HHHHHHHH--------HHHHHHHHHHHHH
Confidence 334488888888 4777776543 33333331 5699999999875
No 32
>1nvp_D Transcription initiation factor IIA gamma chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1 b.56.1.1
Probab=20.33 E-value=74 Score=24.11 Aligned_cols=36 Identities=25% Similarity=0.480 Sum_probs=24.7
Q ss_pred HhHHhhhccCCCCccHHHHHHHHHHHHHHhHhhcCCCCCchHHHHHH
Q 045533 66 LSLYEAAYMAVRGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINH 112 (242)
Q Consensus 66 L~LYeAS~l~~~gE~iLdeA~~fs~~~L~~~~~~~~~~~~l~~~V~~ 112 (242)
.+|||-|-++ .|+ ..-|.+++++|.++|.|+..|-.
T Consensus 2 y~lYR~stiG--------~aL---~dtLdEli~~~~Isp~la~kVL~ 37 (108)
T 1nvp_D 2 YQLYRNTTLG--------NSL---QESLDELIQSQQITPQLALQVLL 37 (108)
T ss_dssp CGGGGSSHHH--------HHH---HHHHHHHHHTTSSCHHHHHHHHH
T ss_pred hhHHhhChHH--------HHH---HHHHHHHHHcCCCCHHHHHHHHH
Confidence 4688887544 344 34467778888899888877744
Done!