BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045535
LLDNVLSDYLWAKAVLLTTATVATAGLTIQVPLAAVVDSLTGNAPKLLDYLGAVAVIIGF
GGINIPDGALSRSKDASLELETENASSSEQEHTSLQQDTT

High Scoring Gene Products

Symbol, full name Information P value
AT3G07080 protein from Arabidopsis thaliana 2.9e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045535
        (100 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2098575 - symbol:AT3G07080 "AT3G07080" species...   144  2.9e-09   1


>TAIR|locus:2098575 [details] [associations]
            symbol:AT3G07080 "AT3G07080" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016020 "membrane"
            evidence=ISS] [GO:0006007 "glucose catabolic process" evidence=RCA]
            Pfam:PF06027 EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0697
            InterPro:IPR009262 KO:K15289 EMBL:AC012395 EMBL:BT008641
            EMBL:BT015790 IPI:IPI00541005 RefSeq:NP_187364.1 UniGene:At.27767
            UniGene:At.40406 TCDB:2.A.7.24.4 PaxDb:Q9SFT8 PRIDE:Q9SFT8
            EnsemblPlants:AT3G07080.1 GeneID:819894 KEGG:ath:AT3G07080
            TAIR:At3g07080 HOGENOM:HOG000242026 InParanoid:Q9SFT8 OMA:LYAVYIT
            PhylomeDB:Q9SFT8 ProtClustDB:CLSN2684815 ArrayExpress:Q9SFT8
            Genevestigator:Q9SFT8 Uniprot:Q9SFT8
        Length = 438

 Score = 144 (55.7 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 31/81 (38%), Positives = 38/81 (46%)

Query:     1 LLDNVLSDYXXXXXXXXXXXXXXXXXXXIQVPLAAVVDSLTGNAPKLLDYLXXXXXXXXX 60
             LLDNVLSDY                   IQVPLAA+VDSL+GN P   DY+         
Sbjct:   333 LLDNVLSDYLWAKAVLLTTTTVATAGLTIQVPLAAIVDSLSGNKPSFTDYIGAAAVMVGF 392

Query:    61 XXXXXPDGALSRSKDASLELE 81
                  P     +SK+ ++ELE
Sbjct:   393 AGINIPSEMFCKSKETAIELE 413


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.304   0.123   0.316    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      100        67   0.00091  102 3  10 23  0.39    29
                                                     29  0.49    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  454 (48 KB)
  Total size of DFA:  91 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:02
  No. of threads or processors used:  24
  Search cpu time:  9.78u 0.08s 9.86t   Elapsed:  00:00:03
  Total cpu time:  9.78u 0.08s 9.86t   Elapsed:  00:00:05
  Start:  Thu May  9 17:01:22 2013   End:  Thu May  9 17:01:27 2013

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