BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045536
(438 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DJ2|A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum
Aestivum And Arabidopsis Thaliana
pdb|1DJ2|B Chain B, Structures Of Adenylosuccinate Synthetase From Triticum
Aestivum And Arabidopsis Thaliana
Length = 443
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/437 (87%), Positives = 409/437 (93%)
Query: 2 TANESPNRIELLSQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEG 61
A ES RI LSQVSGVLGCQWGDEGKGKLVDILA+HFDIVARCQGGANAGHTIYN+EG
Sbjct: 7 AATESLGRIGSLSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEG 66
Query: 62 KKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLF 121
KKFALHLVPSGILNEDT CVIGNGVVVHLPGLF EID LE+NGVSCKGRILVSDRAHLLF
Sbjct: 67 KKFALHLVPSGILNEDTTCVIGNGVVVHLPGLFKEIDGLESNGVSCKGRILVSDRAHLLF 126
Query: 122 DFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSN 181
DFHQEVDGLRE+EL KSFIGTT+RGIGPAYSSKVIR+GIRV DLRHMDT PQKLD LLS+
Sbjct: 127 DFHQEVDGLRESELAKSFIGTTKRGIGPAYSSKVIRNGIRVGDLRHMDTLPQKLDLLLSD 186
Query: 182 AAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATML 241
AAARF GFKYTP MLREEVE YKR A+RLEP++ DTVHFIN+SI+QK+K+LVEGGQATML
Sbjct: 187 AAARFQGFKYTPEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQATML 246
Query: 242 DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGD 301
DIDFGTYPFVTSSSPSAGGICTGLGIAP VVGDLIGVVKAYTTRVGSGPFPTE LG GGD
Sbjct: 247 DIDFGTYPFVTSSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGD 306
Query: 302 HLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYK 361
LRLAGQEFGTTTGRPRRCGWLDIVALK+ CQINGF+SLNLTKLDVLS+L EIQLGVAYK
Sbjct: 307 LLRLAGQEFGTTTGRPRRCGWLDIVALKFSCQINGFASLNLTKLDVLSDLNEIQLGVAYK 366
Query: 362 RVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGV 421
R DGTP+KSFP DL LLE+L VEYEVLPGW+SDISS+RNYSDLPKAA+Q+VERIEELVGV
Sbjct: 367 RSDGTPVKSFPGDLRLLEELHVEYEVLPGWKSDISSVRNYSDLPKAAQQYVERIEELVGV 426
Query: 422 PINYIGVGPGRDALIFK 438
PI+YIG+GPGRDALI+K
Sbjct: 427 PIHYIGIGPGRDALIYK 443
>pdb|1DJ3|A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum
Aestivum And Arabidopsis Thaliana
pdb|1DJ3|B Chain B, Structures Of Adenylosuccinate Synthetase From Triticum
Aestivum And Arabidopsis Thaliana
Length = 442
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/438 (78%), Positives = 389/438 (88%)
Query: 1 VTANESPNRIELLSQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAE 60
V A+ + +R+ LS VSGVLG QWGDEGKGKLVD+LA FDIVARCQGGANAGHTIYN+E
Sbjct: 5 VEADPAADRVSSLSNVSGVLGSQWGDEGKGKLVDVLAPRFDIVARCQGGANAGHTIYNSE 64
Query: 61 GKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLL 120
GKKFALHLVPSGIL+E T+CV+GNG V+H+PG F EID L++NGVSC GRILVSDRAHLL
Sbjct: 65 GKKFALHLVPSGILHEGTLCVVGNGAVIHVPGFFGEIDGLQSNGVSCDGRILVSDRAHLL 124
Query: 121 FDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLS 180
FD HQ VDGLREAEL SFIGTT+RGIGP YSSKV R+G+RV DLRHMDTF KLD L
Sbjct: 125 FDLHQTVDGLREAELANSFIGTTKRGIGPCYSSKVTRNGLRVCDLRHMDTFGDKLDVLFE 184
Query: 181 NAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATM 240
+AAARF GFKY+ ML+EEVE+YK+ AERLEPF+ DTVH +NESI QK+KILVEGGQATM
Sbjct: 185 DAAARFEGFKYSKGMLKEEVERYKKFAERLEPFIADTVHVLNESIRQKKKILVEGGQATM 244
Query: 241 LDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGG 300
LDIDFGTYPFVTSSSPSAGGICTGLGIAPRV+GDLIGVVKAYTTRVGSGPFPTE+LG+ G
Sbjct: 245 LDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKAYTTRVGSGPFPTELLGEEG 304
Query: 301 DHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAY 360
D LR AG EFGTTTGRPRRCGWLDIVALKYCC INGFSSLNLTKLDVLS LPEI+LGV+Y
Sbjct: 305 DVLRKAGMEFGTTTGRPRRCGWLDIVALKYCCDINGFSSLNLTKLDVLSGLPEIKLGVSY 364
Query: 361 KRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVG 420
++DG ++SFP DL LEQ++V YEVLPGW SDISS+R+YS+LP+AAR++VERIEEL G
Sbjct: 365 NQMDGEKLQSFPGDLDTLEQVQVNYEVLPGWDSDISSVRSYSELPQAARRYVERIEELAG 424
Query: 421 VPINYIGVGPGRDALIFK 438
VP++YIGVGPGRDALI+K
Sbjct: 425 VPVHYIGVGPGRDALIYK 442
>pdb|1J4B|A Chain A, Recombinant Mouse-muscle Adenylosuccinate Synthetase
pdb|1IWE|A Chain A, Imp Complex Of The Recombinant Mouse-Muscle
Adenylosuccinate Synthetase
pdb|1IWE|B Chain B, Imp Complex Of The Recombinant Mouse-Muscle
Adenylosuccinate Synthetase
pdb|1LNY|A Chain A, Crystal Structure Of The Recombinant Mouse-Muscle
Adenylosuccinate Synthetase Complexed With 6-Phosphoryl-
Imp, Gdp And Mg
pdb|1LNY|B Chain B, Crystal Structure Of The Recombinant Mouse-Muscle
Adenylosuccinate Synthetase Complexed With 6-Phosphoryl-
Imp, Gdp And Mg
pdb|1LON|A Chain A, Crystal Structure Of The Recombinant Mouse-Muscle
Adenylosuccinate Synthetase Complexed With
6-Phosphoryl-Imp, Gdp And Hadacidin
pdb|1LOO|A Chain A, Crystal Structure Of The Mouse-Muscle Adenylosuccinate
Synthetase Ligated With Gtp
pdb|1MEZ|A Chain A, Structure Of The Recombinant Mouse-Muscle Adenylosuccinate
Synthetase Complexed With Samp, Gdp, So4(2-), And Mg(2+)
pdb|1MF0|A Chain A, Structure Of The Recombinant Mouse-Muscle Adenylosuccinate
Synthetase Complexed With Amp, Gdp, Hpo4(2-), And Mg(2+)
pdb|1MF1|A Chain A, Structure Of The Recombinant Mouse-Muscle Adenylosuccinate
Synthetase Complexed With Amp
pdb|2DGN|A Chain A, Mouse Muscle Adenylosuccinate Synthetase Partially Ligated
Complex With Gtp, 2'-Deoxy-Imp
Length = 457
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/430 (50%), Positives = 304/430 (70%), Gaps = 13/430 (3%)
Query: 14 SQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGI 73
S+V+ VLG QWGDEGKGK+VD+LA DIV+RCQGG NAGHT+ +GK++ HL+PSGI
Sbjct: 31 SRVTVVLGAQWGDEGKGKVVDLLATDADIVSRCQGGNNAGHTVV-VDGKEYDFHLLPSGI 89
Query: 74 LNEDTVCVIGNGVVVHLPGLFNEIDDLEANGVS-CKGRILVSDRAHLLFDFHQEVDGL-- 130
+N V IGNGVV+HLPGLF E + E G+ + R+++SDRAHL+FDFHQ VDGL
Sbjct: 90 INTKAVSFIGNGVVIHLPGLFEEAEKNEKKGLKDWEKRLIISDRAHLVFDFHQAVDGLQE 149
Query: 131 --REAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDL-RHMDTFPQKLDFLLSNAAARFP 187
R+A+ K+ IGTT++GIGP YSSK R+G+R+ DL D F + L + FP
Sbjct: 150 VQRQAQEGKN-IGTTKKGIGPTYSSKAARTGLRICDLLSDFDEFSARFKNLAHQHQSMFP 208
Query: 188 GFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESI-AQKRKILVEGGQATMLDIDFG 246
+ + ++++ K AER+ P V D V+F+ E++ +K+LVEG A +LDIDFG
Sbjct: 209 TLEID---VEGQLKRLKGFAERIRPMVRDGVYFMYEALHGPPKKVLVEGANAALLDIDFG 265
Query: 247 TYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLA 306
TYPFVTSS+ + GG+CTGLGI P+ +GD+ GVVKAYTTRVG G FPTE + + GD L+
Sbjct: 266 TYPFVTSSNCTVGGVCTGLGIPPQNIGDVYGVVKAYTTRVGIGAFPTEQINEIGDLLQNR 325
Query: 307 GQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGT 366
G E+G TTGR RRCGWLD++ L+Y +NGF++L LTKLD+L L EI++G++YK ++G
Sbjct: 326 GHEWGVTTGRKRRCGWLDLMILRYAHMVNGFTALALTKLDILDVLSEIKVGISYK-LNGK 384
Query: 367 PIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYI 426
I FPA+ +L++++VEYE LPGW++D + R + DLP A+ +V +E +GV + ++
Sbjct: 385 RIPYFPANQEILQKVEVEYETLPGWKADTTGARKWEDLPPQAQSYVRFVENHMGVAVKWV 444
Query: 427 GVGPGRDALI 436
GVG R+++I
Sbjct: 445 GVGKSRESMI 454
>pdb|2V40|A Chain A, Human Adenylosuccinate Synthetase Isozyme 2 In Complex
With Gdp
Length = 459
Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/431 (49%), Positives = 298/431 (69%), Gaps = 13/431 (3%)
Query: 14 SQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGI 73
++V+ VLG QWGDEGKGK+VD+LA+ DIV RCQGG NAGHT+ + ++ HL+PSGI
Sbjct: 31 NRVTVVLGAQWGDEGKGKVVDLLAQDADIVCRCQGGNNAGHTVV-VDSVEYDFHLLPSGI 89
Query: 74 LNEDTVCVIGNGVVVHLPGLFNEIDDLEANGVSCKG---RILVSDRAHLLFDFHQEVDGL 130
+N + IGNGVV+HLPGLF E + G +G R+++SDRAH++FDFHQ DG+
Sbjct: 90 INPNVTAFIGNGVVIHLPGLFEEAEKNVQKGKGLEGWEKRLIISDRAHIVFDFHQAADGI 149
Query: 131 REA---ELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDL-RHMDTFPQKLDFLLSNAAARF 186
+E E +GTT++GIGP YSSK RSG+R+ DL D F ++ L + + +
Sbjct: 150 QEQQRQEQAGKNLGTTKKGIGPVYSSKAARSGLRMCDLVSDFDGFSERFKVLANQYKSIY 209
Query: 187 PGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESI-AQKRKILVEGGQATMLDIDF 245
P + + E++K K E+++P V D V+F+ E++ +KILVEG A +LDIDF
Sbjct: 210 PTLEID---IEGELQKLKGYMEKIKPMVRDGVYFLYEALHGPPKKILVEGANAALLDIDF 266
Query: 246 GTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRL 305
GTYPFVTSS+ + GG+CTGLG+ P+ VG++ GVVKAYTTRVG G FPTE + G+ L+
Sbjct: 267 GTYPFVTSSNCTVGGVCTGLGMPPQNVGEVYGVVKAYTTRVGIGAFPTEQDNEIGELLQT 326
Query: 306 AGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDG 365
G+EFG TTGR RRCGWLD+V LKY INGF++L LTKLD+L EI++GVAYK +DG
Sbjct: 327 RGREFGVTTGRKRRCGWLDLVLLKYAHMINGFTALALTKLDILDMFTEIKVGVAYK-LDG 385
Query: 366 TPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINY 425
I PA+ +L +++V+Y+ LPGW +DIS+ R + +LP A+ +V IE+ + +P+ +
Sbjct: 386 EIIPHIPANQEVLNKVEVQYKTLPGWNTDISNARAFKELPVNAQNYVRFIEDELQIPVKW 445
Query: 426 IGVGPGRDALI 436
IGVG R+++I
Sbjct: 446 IGVGKSRESMI 456
>pdb|3HID|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase From
Yersinia Pestis Co92
Length = 432
Score = 370 bits (949), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/422 (46%), Positives = 263/422 (62%), Gaps = 14/422 (3%)
Query: 19 VLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDT 78
VLG QWGDEGKGK+VD+L E V R QGG NAGHT+ G+K LHL+PSGIL E+
Sbjct: 7 VLGTQWGDEGKGKVVDLLTERAKYVVRYQGGHNAGHTLV-INGEKTVLHLIPSGILRENV 65
Query: 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKS 138
+ +IGNGVV+ L E+ +LEA GV + R+L+S+ L+ +H +D RE
Sbjct: 66 ISIIGNGVVLAPDALMKEMTELEARGVPVRERLLLSEACPLILPYHVALDNAREKARGAK 125
Query: 139 FIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLRE 198
IGTT RGIGPAY KV R G+RVSDL + +TF KL ++ + F+ H +E
Sbjct: 126 AIGTTGRGIGPAYEDKVARRGLRVSDLFNKETFAIKLKEIVE-----YHNFQLV-HYYKE 179
Query: 199 EVEKYKR-------IAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFV 251
Y++ IA+ L VVD ++ + Q I+ EG Q T+LDID GTYP+V
Sbjct: 180 AAVDYQKVLDDVLAIADILTAMVVDVSELLDNARKQGELIMFEGAQGTLLDIDHGTYPYV 239
Query: 252 TSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFG 311
TSS+ +AGG+ TG G+ PR V ++G+VKAY+TRVG+GPFPTE+ + G+ LR G E+G
Sbjct: 240 TSSNTTAGGVATGSGLGPRYVDYVLGIVKAYSTRVGAGPFPTELNDETGEFLRKQGNEYG 299
Query: 312 TTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSF 371
TTGR RR GWLDIVA++ QIN S +TKLDVL L E++L V Y+ DG + +
Sbjct: 300 ATTGRSRRTGWLDIVAVRRAVQINSLSGFCMTKLDVLDGLKEVKLCVGYRMPDGREVDTT 359
Query: 372 PADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPG 431
P E ++ YE +PGW ++ +S LP+AA +++R+EEL GVPI+ I GP
Sbjct: 360 PLAAEGWEGIEPIYETMPGWSETTFGVKEHSKLPQAALNYIQRVEELTGVPIDIISTGPD 419
Query: 432 RD 433
RD
Sbjct: 420 RD 421
>pdb|1CG0|A Chain A, Structure Of Adenylosuccinate Synthetase From E. Coli
Complexed With Hadacidin, Gdp, 6-Phosphoryl-Imp, And
Mg2+
pdb|1CH8|A Chain A, Structure Of Adenylosuccinate Synthetase From E. Coli
Complexed With A Stringent Effector, Ppg2':3'p
pdb|1QF4|A Chain A, Design, Synthesis, And X-Ray Crystal Structure Of An
Enzyme Bound Bisubstrate Hybrid Inhibitor Of
Adenylosuccinate Synthetase
pdb|1QF5|A Chain A, Design, Synthesis, And X-Ray Crystal Structure Of An
Enzyme Bound Bisubstrate Hybrid Inhibitor Of
Adenylosuccinate Synthetase
pdb|1CIB|A Chain A, Structure Of Adenylosuccinate Synthetase From E. Coli
Complexed With Gdp, Imp, Hadacidin, And No3
pdb|2GCQ|A Chain A, Fully Ligated E.Coli Adenylosuccinate Synthetase With Gtp,
2'-Deoxy- Imp And Hadacidin
pdb|1SON|A Chain A, Adenylosuccinate Synthetase In Complex With The Natural
Feedback Inhibitor Amp
pdb|1SOO|A Chain A, Adenylosuccinate Synthetase Inhibited By Hydantocidin
5'-Monophosphate
pdb|1ADE|A Chain A, Structure Of Adenylosuccinate Synthetase Ph 7 At 25
Degrees Celsius
pdb|1ADE|B Chain B, Structure Of Adenylosuccinate Synthetase Ph 7 At 25
Degrees Celsius
pdb|1ADI|A Chain A, Structure Of Adenylosuccinate Synthetase At Ph 6.5 And 25
Degrees Celsius
pdb|1ADI|B Chain B, Structure Of Adenylosuccinate Synthetase At Ph 6.5 And 25
Degrees Celsius
pdb|1HOO|A Chain A, Structure Of Guanine Nucleotide (Gppcp) Complex Of
Adenylosuccinate Synthetase From E. Coli At Ph 6.5 And
25 Degrees Celsius
pdb|1HOO|B Chain B, Structure Of Guanine Nucleotide (Gppcp) Complex Of
Adenylosuccinate Synthetase From E. Coli At Ph 6.5 And
25 Degrees Celsius
pdb|1GIM|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase From
Escherichia Coli Complexed With Gdp, Imp, Hadacidin,
No3-, And Mg2+. Data Collected At 100k (Ph 6.5)
pdb|1GIN|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase From
Escherichia Coli Complexed With Gdp, Imp, Hadacidin,
No3-, And Mg2+. Data Collected At 298k (Ph 6.5).
pdb|1KSZ|A Chain A, Entrapment Of 6-Thiophosphoryl-Imp In The Active Site Of
Crystalline Adenylosuccinate Synthetase From Escherichia
Coli, Data Collected At 298k
pdb|1NHT|A Chain A, Entrapment Of 6-Thiophosphoryl-Imp In The Active Site Of
Crystalline Adenylosuccinate Synthetase From Escherichia
Coli Data Collected At 100k
pdb|1JUY|A Chain A, Refined Crystal Structure Of Adenylosuccinate Synthetase
From Escherichia Coli Complexed With Hydantocidin 5'-
Phosphate Gdp, Hpo4(2-), Mg2+, And Hadacidin
Length = 431
Score = 357 bits (917), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 188/420 (44%), Positives = 259/420 (61%), Gaps = 12/420 (2%)
Query: 19 VLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDT 78
VLG QWGDEGKGK+VD+L E V R QGG NAGHT+ G+K LHL+PSGIL E+
Sbjct: 6 VLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLV-INGEKTVLHLIPSGILRENV 64
Query: 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKS 138
+IGNGVV+ L E+ +LE G+ + R+L+S+ L+ D+H +D RE
Sbjct: 65 TSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAK 124
Query: 139 FIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLRE 198
IGTT RGIGPAY KV R G+RV DL +TF +KL ++ + F+ + E
Sbjct: 125 AIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVME-----YHNFQLVNYYKAE 179
Query: 199 EVEKYK------RIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVT 252
V+ K +A+ L VVD ++++ + ++ EG Q T+LDID GTYP+VT
Sbjct: 180 AVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVT 239
Query: 253 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGT 312
SS+ +AGG+ TG G+ PR V ++G++KAY+TRVG+GPFPTE+ + G+ L G EFG
Sbjct: 240 SSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGA 299
Query: 313 TTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFP 372
TTGR RR GWLD VA++ Q+N S LTKLDVL L E++L VAY+ DG + + P
Sbjct: 300 TTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTP 359
Query: 373 ADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGR 432
+ ++ YE +PGW +++ S LP+AA +++RIEEL GVPI+ I GP R
Sbjct: 360 LAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDR 419
>pdb|1KJX|A Chain A, Imp Complex Of E. Coli Adenylosuccinate Synthetase
pdb|1KKB|A Chain A, Complex Of Escherichia Coli Adenylosuccinate Synthetase
With Imp And Hadacidin
pdb|1KKF|A Chain A, Complex Of E. Coli Adenylosuccinate Synthetase With Imp,
Hadacidin, Pyrophosphate, And Mg
Length = 432
Score = 357 bits (917), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 188/420 (44%), Positives = 259/420 (61%), Gaps = 12/420 (2%)
Query: 19 VLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDT 78
VLG QWGDEGKGK+VD+L E V R QGG NAGHT+ G+K LHL+PSGIL E+
Sbjct: 7 VLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLV-INGEKTVLHLIPSGILRENV 65
Query: 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKS 138
+IGNGVV+ L E+ +LE G+ + R+L+S+ L+ D+H +D RE
Sbjct: 66 TSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAK 125
Query: 139 FIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLRE 198
IGTT RGIGPAY KV R G+RV DL +TF +KL ++ + F+ + E
Sbjct: 126 AIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVME-----YHNFQLVNYYKAE 180
Query: 199 EVEKYK------RIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVT 252
V+ K +A+ L VVD ++++ + ++ EG Q T+LDID GTYP+VT
Sbjct: 181 AVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVT 240
Query: 253 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGT 312
SS+ +AGG+ TG G+ PR V ++G++KAY+TRVG+GPFPTE+ + G+ L G EFG
Sbjct: 241 SSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGA 300
Query: 313 TTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFP 372
TTGR RR GWLD VA++ Q+N S LTKLDVL L E++L VAY+ DG + + P
Sbjct: 301 TTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTP 360
Query: 373 ADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGR 432
+ ++ YE +PGW +++ S LP+AA +++RIEEL GVPI+ I GP R
Sbjct: 361 LAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDR 420
>pdb|1HON|A Chain A, Structure Of Guanine Nucleotide (Gppcp) Complex Of
Adenylosuccinate Synthetase From Escherichia Coli At Ph
6.5 And 25 Degree Celsius
pdb|1HON|B Chain B, Structure Of Guanine Nucleotide (Gppcp) Complex Of
Adenylosuccinate Synthetase From Escherichia Coli At Ph
6.5 And 25 Degree Celsius
pdb|1HOP|A Chain A, Structure Of Guanine Nucleotide (Gppcp) Complex Of
Adenylosuccinate Synthetase From Escherichia Coli At Ph
6.5 And 25 Degrees Celsius
pdb|1HOP|B Chain B, Structure Of Guanine Nucleotide (Gppcp) Complex Of
Adenylosuccinate Synthetase From Escherichia Coli At Ph
6.5 And 25 Degrees Celsius
Length = 431
Score = 357 bits (917), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 188/420 (44%), Positives = 259/420 (61%), Gaps = 12/420 (2%)
Query: 19 VLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDT 78
VLG QWGDEGKGK+VD+L E V R QGG NAGHT+ G+K LHL+PSGIL E+
Sbjct: 6 VLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLV-INGEKTVLHLIPSGILRENV 64
Query: 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKS 138
+IGNGVV+ L E+ +LE G+ + R+L+S+ L+ D+H +D RE
Sbjct: 65 TSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAK 124
Query: 139 FIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLRE 198
IGTT RGIGPAY KV R G+RV DL +TF +KL ++ + F+ + E
Sbjct: 125 AIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVME-----YHNFQLVNYYKAE 179
Query: 199 EVEKYK------RIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVT 252
V+ K +A+ L VVD ++++ + ++ EG Q T+LDID GTYP+VT
Sbjct: 180 AVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVT 239
Query: 253 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGT 312
SS+ +AGG+ TG G+ PR V ++G++KAY+TRVG+GPFPTE+ + G+ L G EFG
Sbjct: 240 SSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGA 299
Query: 313 TTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFP 372
TTGR RR GWLD VA++ Q+N S LTKLDVL L E++L VAY+ DG + + P
Sbjct: 300 TTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTP 359
Query: 373 ADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGR 432
+ ++ YE +PGW +++ S LP+AA +++RIEEL GVPI+ I GP R
Sbjct: 360 LAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDR 419
>pdb|1P9B|A Chain A, Structure Of Fully Ligated Adenylosuccinate Synthetase
From Plasmodium Falciparum
Length = 442
Score = 357 bits (916), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 187/429 (43%), Positives = 272/429 (63%), Gaps = 12/429 (2%)
Query: 15 QVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGIL 74
V +LG QWGDEGKGK++D+L+E+ DI R GGANAGHTI + KK+ALHL+P G+L
Sbjct: 15 NVVAILGAQWGDEGKGKIIDMLSEYSDITCRFNGGANAGHTI-SVNDKKYALHLLPCGVL 73
Query: 75 NEDTVCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAE 134
++ + V+GNG+V+H+ L EI E+ G R+ +S++AH+LFD HQ +D ++E +
Sbjct: 74 YDNNISVLGNGMVIHVKSLMEEI---ESVGGKLLDRLYLSNKAHILFDIHQIIDSIQETK 130
Query: 135 LVK--SFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYT 192
+K IGTT+RGIGP YS+K R GIR+ L++ + F L+ + + +Y
Sbjct: 131 KLKEGKQIGTTKRGIGPCYSTKASRIGIRLGTLKNFENFKNMYSKLIDHLMDLYNITEYD 190
Query: 193 PHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVT 252
+E+ + +L +VD + F+N ++ +K+L+EG A MLDIDFGTYP+VT
Sbjct: 191 K---EKELNLFYNYHIKLRDRIVDVISFMNTNLENNKKVLIEGANAAMLDIDFGTYPYVT 247
Query: 253 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGT 312
SS + GG+ +GLGI + + ++GVVK+Y TRVG GPF TE+ G +LR G E+GT
Sbjct: 248 SSCTTVGGVFSGLGIHHKKLNLVVGVVKSYLTRVGCGPFLTELNNDVGQYLREKGHEYGT 307
Query: 313 TTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYK-RVDGTPIKS- 370
TT RPRRCGWLDI L Y IN +NLTKLDVLS L EI L V +K + G ++
Sbjct: 308 TTKRPRRCGWLDIPMLLYVKCINSIDMINLTKLDVLSGLEEILLCVNFKNKKTGELLEKG 367
Query: 371 -FPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVG 429
+P + + E+ + YE GW+ DIS+ + +LP+ A++++ IE+ + PI +IGVG
Sbjct: 368 CYPVEEEISEEYEPVYEKFSGWKEDISTCNEFDELPENAKKYILAIEKYLKTPIVWIGVG 427
Query: 430 PGRDALIFK 438
P R +I K
Sbjct: 428 PNRKNMIVK 436
>pdb|1CG1|A Chain A, Structure Of The Mutant (K16q) Of Adenylosuccinate
Synthetase From E. Coli Complexed With Hadacidin, Gdp,
6-Phosphoryl-Imp, And Mg2+
Length = 431
Score = 356 bits (913), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/420 (44%), Positives = 259/420 (61%), Gaps = 12/420 (2%)
Query: 19 VLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDT 78
VLG QWGDEG+GK+VD+L E V R QGG NAGHT+ G+K LHL+PSGIL E+
Sbjct: 6 VLGTQWGDEGQGKIVDLLTERAKYVVRYQGGHNAGHTLV-INGEKTVLHLIPSGILRENV 64
Query: 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKS 138
+IGNGVV+ L E+ +LE G+ + R+L+S+ L+ D+H +D RE
Sbjct: 65 TSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAK 124
Query: 139 FIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLRE 198
IGTT RGIGPAY KV R G+RV DL +TF +KL ++ + F+ + E
Sbjct: 125 AIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVME-----YHNFQLVNYYKAE 179
Query: 199 EVEKYK------RIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVT 252
V+ K +A+ L VVD ++++ + ++ EG Q T+LDID GTYP+VT
Sbjct: 180 AVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVT 239
Query: 253 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGT 312
SS+ +AGG+ TG G+ PR V ++G++KAY+TRVG+GPFPTE+ + G+ L G EFG
Sbjct: 240 SSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGA 299
Query: 313 TTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFP 372
TTGR RR GWLD VA++ Q+N S LTKLDVL L E++L VAY+ DG + + P
Sbjct: 300 TTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTP 359
Query: 373 ADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGR 432
+ ++ YE +PGW +++ S LP+AA +++RIEEL GVPI+ I GP R
Sbjct: 360 LAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDR 419
>pdb|1CG3|A Chain A, Structure Of The Mutant (R143l) Of Adenylosuccinate
Synthetase From E. Coli Complexed With Hadacidin, Gdp,
6-Phosphoryl-Imp, And Mg2+
Length = 431
Score = 354 bits (909), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 187/420 (44%), Positives = 258/420 (61%), Gaps = 12/420 (2%)
Query: 19 VLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDT 78
VLG QWGDEGKGK+VD+L E V R QGG NAGHT+ G+K LHL+PSGIL E+
Sbjct: 6 VLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLV-INGEKTVLHLIPSGILRENV 64
Query: 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKS 138
+IGNGVV+ L E+ +LE G+ + R+L+S+ L+ D+H +D RE
Sbjct: 65 TSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAK 124
Query: 139 FIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLRE 198
IGTT RGIGPAY KV G+RV DL +TF +KL ++ + F+ + E
Sbjct: 125 AIGTTGRGIGPAYEDKVALRGLRVGDLFDKETFAEKLKEVME-----YHNFQLVNYYKAE 179
Query: 199 EVEKYK------RIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVT 252
V+ K +A+ L VVD ++++ + ++ EG Q T+LDID GTYP+VT
Sbjct: 180 AVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVT 239
Query: 253 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGT 312
SS+ +AGG+ TG G+ PR V ++G++KAY+TRVG+GPFPTE+ + G+ L G EFG
Sbjct: 240 SSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGA 299
Query: 313 TTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFP 372
TTGR RR GWLD VA++ Q+N S LTKLDVL L E++L VAY+ DG + + P
Sbjct: 300 TTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTP 359
Query: 373 ADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGR 432
+ ++ YE +PGW +++ S LP+AA +++RIEEL GVPI+ I GP R
Sbjct: 360 LAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDR 419
>pdb|1CG4|A Chain A, Structure Of The Mutant (R303l) Of Adenylosuccinate
Synthetase From E. Coli Complexed With, Gdp,
6-Phosphoryl-Imp, And Mg2+
Length = 431
Score = 354 bits (909), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 187/420 (44%), Positives = 258/420 (61%), Gaps = 12/420 (2%)
Query: 19 VLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDT 78
VLG QWGDEGKGK+VD+L E V R QGG NAGHT+ G+K LHL+PSGIL E+
Sbjct: 6 VLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLV-INGEKTVLHLIPSGILRENV 64
Query: 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKS 138
+IGNGVV+ L E+ +LE G+ + R+L+S+ L+ D+H +D RE
Sbjct: 65 TSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAK 124
Query: 139 FIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLRE 198
IGTT RGIGPAY KV R G+RV DL +TF +KL ++ + F+ + E
Sbjct: 125 AIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVME-----YHNFQLVNYYKAE 179
Query: 199 EVEKYK------RIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVT 252
V+ K +A+ L VVD ++++ + ++ EG Q T+LDID GTYP+VT
Sbjct: 180 AVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVT 239
Query: 253 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGT 312
SS+ +AGG+ TG G+ PR V ++G++KAY+TRVG+GPFPTE+ + G+ L G EFG
Sbjct: 240 SSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGA 299
Query: 313 TTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFP 372
TTG RR GWLD VA++ Q+N S LTKLDVL L E++L VAY+ DG + + P
Sbjct: 300 TTGLRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTP 359
Query: 373 ADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGR 432
+ ++ YE +PGW +++ S LP+AA +++RIEEL GVPI+ I GP R
Sbjct: 360 LAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDR 419
>pdb|3R7T|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase From
Campylobacter Jejuni
Length = 419
Score = 330 bits (846), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 182/428 (42%), Positives = 261/428 (60%), Gaps = 18/428 (4%)
Query: 14 SQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGI 73
S+ ++G QWGDEGKGK+VD L E++D V R GG NAGHTI+ G ++ALHL PSG+
Sbjct: 5 SKADIIVGIQWGDEGKGKVVDKLCENYDFVCRSAGGHNAGHTIW-VNGVRYALHLXPSGV 63
Query: 74 LNEDTVCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREA 133
L+ + +IGNGVVV L E E + KGR+ +SDRAHL H +D +E
Sbjct: 64 LHPRCINIIGNGVVVSPEVLIAEXAQFE----NLKGRLYISDRAHLNLKHHSLIDIAKEK 119
Query: 134 ELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKL-DFLLSNAAAR---FPGF 189
K+ IGTT +GIGP+Y+ K+ R+G RV +L PQ+L + L+ + A F
Sbjct: 120 LKGKNAIGTTGKGIGPSYADKINRTGHRVGELLE----PQRLCEALIKDFEANKTFFEXL 175
Query: 190 KYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYP 249
+ E + KR E L P++ DT + +++ + +++L+EG Q + LDID GTYP
Sbjct: 176 EIEIPSAEELLADLKRFNEILTPYITDTTRXLWKALDEDKRVLLEGAQGSXLDIDHGTYP 235
Query: 250 FVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQE 309
+VTSSS + G TGLG+ P+ G++IG+VKAY TRVG+G FPTE G+ G+ + G+E
Sbjct: 236 YVTSSSTISAGTLTGLGLNPKEAGNIIGIVKAYATRVGNGAFPTEDKGEDGEKIAQIGKE 295
Query: 310 FGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIK 369
G +TGR RRCGW D VA++Y ++NG +L+L KLDVL +I++ AY+ G I
Sbjct: 296 IGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLXKLDVLDGFEKIKICRAYE-YKGXEID 354
Query: 370 SFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVG 429
P+D LE ++ YE GW + I++Y LP+ A++++ R+EEL GV + YI
Sbjct: 355 YIPSD---LENVQPIYEEXDGWDK-VFGIKDYDLLPENAKKYIARLEELAGVKVKYISTS 410
Query: 430 PGRDALIF 437
P RD I
Sbjct: 411 PERDDTII 418
>pdb|3UE9|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase (Ampsase)
(Pura) From Burkholderia Thailandensis
pdb|3UE9|B Chain B, Crystal Structure Of Adenylosuccinate Synthetase (Ampsase)
(Pura) From Burkholderia Thailandensis
pdb|3UE9|C Chain C, Crystal Structure Of Adenylosuccinate Synthetase (Ampsase)
(Pura) From Burkholderia Thailandensis
pdb|3UE9|D Chain D, Crystal Structure Of Adenylosuccinate Synthetase (Ampsase)
(Pura) From Burkholderia Thailandensis
Length = 452
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 244/433 (56%), Gaps = 21/433 (4%)
Query: 19 VLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDT 78
V+G QWGDEGKGK+VD L +H V R QGG NAGHT+ GKK L L+PSGI+ E
Sbjct: 20 VVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIG-GKKTILRLIPSGIMREGV 78
Query: 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKS 138
C IGNGVV+ LF EI +LE G+S + R+ +S+ L+ +H +D REA
Sbjct: 79 ACYIGNGVVLSPEALFKEIGELEEAGLSVRERLFISEATTLILPYHIAIDQAREARKGAG 138
Query: 139 FIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHM--- 195
IGTT RGIGPAY KV R +RV DL TF +L L F F T ++
Sbjct: 139 KIGTTGRGIGPAYEDKVGRRALRVQDLFDARTFADRLRENLD-----FHNFVLTQYLGGA 193
Query: 196 ---LREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVT 252
+ ++ A+RL P V D + E R +L EG Q T+LDID GTYPFVT
Sbjct: 194 AVDFQATLDTMLGYADRLRPMVADVSRRLYEENHAGRNLLFEGAQGTLLDIDHGTYPFVT 253
Query: 253 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIL--------GQGGDHLR 304
SS+ AG G G+ P+ + ++G+ KAY TRVGSGPFP+E+ Q G L
Sbjct: 254 SSNCVAGAAAAGAGVGPQKLNYILGITKAYCTRVGSGPFPSELYDADNPSRQDQIGITLA 313
Query: 305 LAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVD 364
G+EFG+ TGRPRR GWLD AL+ QING S L +TKLDVL L E++L V YK +D
Sbjct: 314 NVGKEFGSVTGRPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVKLCVGYK-ID 372
Query: 365 GTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPIN 424
G P + + + YE GW+ I ++ LP AR ++ R++E+ GVPI+
Sbjct: 373 GEDADLLPRGAAEVARCEPVYETFGGWKESTVGINSWDALPANARAYLTRVQEVAGVPID 432
Query: 425 YIGVGPGRDALIF 437
+ GP RD I
Sbjct: 433 MVSTGPDRDETIL 445
>pdb|2D7U|A Chain A, Crystal Structure Of Hypothetical Adenylosuccinate
Synthetase, Ph0438 From Pyrococcus Horikoshii Ot3
Length = 339
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 198/420 (47%), Gaps = 94/420 (22%)
Query: 19 VLGCQWGDEGKGKLVDILAEHFD--IVARCQGGANAGHTIYNAEGKKFALHLVPSGILNE 76
V+G QWGDEGKG +V L+ H + I+AR G NAGH++ GKK+A+ +P+G +
Sbjct: 6 VVGGQWGDEGKGSIVAYLSLHDEPEIIARGGVGTNAGHSVV-INGKKYAVRQIPTGFMQT 64
Query: 77 DTVCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELV 136
+IG GV+V F+E++ L+ + K R+ + R ++ + H+++D R +
Sbjct: 65 KARLLIGAGVLVDPEVFFHELEQLK--DFNVKDRVGIDYRCAIIEEKHKQLD--RTNGYL 120
Query: 137 KSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHML 196
IGTT G GPA + +V+R + D++
Sbjct: 121 HGKIGTTGSGCGPANADRVMRKAKQAKDVKE----------------------------- 151
Query: 197 REEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSP 256
LEP++ D IN+++ + +LVEG Q L + +GTYP+VTS
Sbjct: 152 -------------LEPYLTDVAQEINDALDEGSLVLVEGTQGFGLSLYYGTYPYVTSKDV 198
Query: 257 SAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGR 316
+A + +GI P V ++I V K++ TRVG+GPFPTE+ + D L L E+GT TGR
Sbjct: 199 TASSVAADVGIGPTRVDEVIVVFKSFPTRVGAGPFPTEMPMEEADRLGLV--EYGTVTGR 256
Query: 317 PRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLV 376
RR GW D +Y +ING + L +T LD
Sbjct: 257 RRRVGWFDFEMARYSARINGATMLAVTMLD------------------------------ 286
Query: 377 LLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 436
+ + + +Y LP+ A++F+E IEE VGVP+ I GP + +I
Sbjct: 287 -------------KYDKEAFGVTDYDKLPRKAKEFIEEIEERVGVPVGLIKTGPELEHII 333
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 18/81 (22%)
Query: 237 QATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGS----GPFP 292
+A ++++ GT+PF S A TGL +V+ D A T RV GP
Sbjct: 373 KAEGVEVNVGTFPFAASGRAMAANDTTGL---VKVIAD------AKTDRVLGVHVIGPSA 423
Query: 293 TEILGQGGDHLRLAGQEFGTT 313
E++ QG G EFGT+
Sbjct: 424 AELVQQGA-----IGMEFGTS 439
>pdb|4DXL|A Chain A, Crystal Structure Of Ispe
(4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase) From
Mycobacterium Abscessus, Bound To Cmp And Atp
pdb|4ED4|A Chain A, Crystal Structure Of Ispe
(4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase) From
Mycobacterium Abcessus, Bound To Atp
pdb|4EMD|A Chain A, Crystal Structure Of Ispe
(4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase) From
Mycobacterium Abcessus, Bound To Cmp And So4
Length = 318
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 207 AERLEPFVVDTVHFINESI-AQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGL 265
A RL P + + + S+ + R+ L G A L V+ S P+ +CT
Sbjct: 227 ARRLAPLLGNELQAAAVSLNPELRRTLRAGESAGAL------AGIVSGSGPTCAFLCTSA 280
Query: 266 GIAPRVVGDLIGVVKAYTTRVGSGP 290
A +V +L G T RV SGP
Sbjct: 281 DDAVQVSAELAGAGVCRTVRVASGP 305
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.141 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,820,654
Number of Sequences: 62578
Number of extensions: 624055
Number of successful extensions: 1386
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1317
Number of HSP's gapped (non-prelim): 27
length of query: 438
length of database: 14,973,337
effective HSP length: 102
effective length of query: 336
effective length of database: 8,590,381
effective search space: 2886368016
effective search space used: 2886368016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)