Query 045536
Match_columns 438
No_of_seqs 152 out of 1078
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 03:04:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045536.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045536hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0104 PurA Adenylosuccinate 100.0 7E-169 1E-173 1270.6 35.1 422 14-437 1-424 (430)
2 TIGR00184 purA adenylosuccinat 100.0 2E-165 4E-170 1265.1 36.5 418 18-437 1-419 (425)
3 PLN02513 adenylosuccinate synt 100.0 8E-165 2E-169 1262.5 39.2 425 14-438 2-426 (427)
4 PRK13786 adenylosuccinate synt 100.0 2E-164 4E-169 1257.7 39.7 419 16-438 2-423 (424)
5 PRK13787 adenylosuccinate synt 100.0 2E-164 4E-169 1257.3 38.4 420 14-438 1-422 (423)
6 PTZ00350 adenylosuccinate synt 100.0 4E-163 9E-168 1252.5 39.3 427 5-438 5-435 (436)
7 PRK13784 adenylosuccinate synt 100.0 5E-163 1E-167 1248.3 37.9 418 14-438 1-421 (428)
8 PRK01117 adenylosuccinate synt 100.0 2E-162 4E-167 1248.7 36.3 422 14-437 1-423 (430)
9 smart00788 Adenylsucc_synt Ade 100.0 2E-161 5E-166 1238.8 37.2 420 16-437 1-421 (421)
10 PRK13785 adenylosuccinate synt 100.0 5E-160 1E-164 1232.3 37.2 418 16-438 2-450 (454)
11 PF00709 Adenylsucc_synt: Aden 100.0 4E-160 9E-165 1232.9 27.2 420 16-437 1-421 (421)
12 PRK13783 adenylosuccinate synt 100.0 6E-157 1E-161 1196.1 38.6 404 15-438 1-404 (404)
13 PRK13788 adenylosuccinate synt 100.0 7E-155 2E-159 1180.8 37.1 395 14-437 1-399 (404)
14 cd03108 AdSS Adenylosuccinate 100.0 1E-151 3E-156 1142.3 34.2 363 16-430 1-363 (363)
15 KOG1355 Adenylosuccinate synth 100.0 1E-151 2E-156 1117.2 29.6 423 11-438 26-454 (455)
16 PTZ00351 adenylosuccinate synt 100.0 5E-149 1E-153 1160.0 35.8 424 5-437 160-707 (710)
17 PRK04293 adenylosuccinate synt 100.0 6E-135 1E-139 1009.3 28.9 330 14-438 1-332 (333)
18 COG0552 FtsY Signal recognitio 58.7 8.6 0.00019 40.0 3.1 62 327-415 273-338 (340)
19 PF13316 DUF4087: Protein of u 55.5 3.4 7.4E-05 35.8 -0.4 10 318-327 7-16 (101)
20 PF11181 YflT: Heat induced st 45.6 1.8E+02 0.0038 24.6 8.7 60 85-152 4-63 (103)
21 PRK05414 urocanate hydratase; 44.5 1.9E+02 0.0042 32.0 10.5 162 79-251 100-278 (556)
22 PF01175 Urocanase: Urocanase; 41.2 97 0.0021 34.2 7.7 161 78-250 89-267 (546)
23 TIGR01228 hutU urocanate hydra 39.9 2.7E+02 0.0058 30.8 10.7 161 79-250 91-268 (545)
24 KOG0176 20S proteasome, regula 34.8 55 0.0012 31.9 4.2 68 19-97 118-185 (241)
25 PF06279 DUF1033: Protein of u 30.8 35 0.00076 30.5 2.1 33 387-419 16-48 (120)
26 COG0300 DltE Short-chain dehyd 29.1 40 0.00086 34.0 2.4 16 282-297 180-195 (265)
27 PRK04220 2-phosphoglycerate ki 25.7 88 0.0019 32.1 4.2 90 140-236 98-198 (301)
28 COG3040 Blc Bacterial lipocali 25.7 1.3E+02 0.0029 28.5 5.0 78 27-108 87-164 (174)
29 PF09136 Glucodextran_B: Gluco 24.9 74 0.0016 26.6 2.8 32 39-72 16-47 (89)
30 COG0800 Eda 2-keto-3-deoxy-6-p 24.7 75 0.0016 31.0 3.3 32 79-118 64-95 (211)
31 PRK12339 2-phosphoglycerate ki 24.6 86 0.0019 29.8 3.7 76 156-236 25-105 (197)
32 PHA02152 hypothetical protein 24.6 12 0.00025 31.4 -1.9 25 6-30 28-53 (96)
33 PF09358 UBA_e1_C: Ubiquitin-a 21.5 85 0.0018 27.9 2.8 27 405-431 42-68 (125)
34 KOG4612 Mitochondrial ribosoma 20.3 42 0.00091 28.7 0.5 37 289-325 43-82 (105)
35 KOG1014 17 beta-hydroxysteroid 20.3 46 0.001 34.3 0.9 35 144-181 58-92 (312)
36 KOG2692 Sialyltransferase [Car 20.2 1E+02 0.0022 32.4 3.5 40 18-68 165-204 (376)
No 1
>COG0104 PurA Adenylosuccinate synthase [Nucleotide transport and metabolism]
Probab=100.00 E-value=6.5e-169 Score=1270.62 Aligned_cols=422 Identities=50% Similarity=0.877 Sum_probs=413.5
Q ss_pred CcEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHH
Q 045536 14 SQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGL 93 (438)
Q Consensus 14 ~~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l 93 (438)
|+.++|||+|||||||||||||||.++|+|||||||+||||||+ ++|++|+|||||||+|+|++.|+|||||||||++|
T Consensus 1 m~~~VVvG~QWGDEGKGKIvD~L~~~~d~VvR~qGG~NAGHTvv-v~g~~~~LhLiPSGil~~~~~~vIGnGvVvdP~~L 79 (430)
T COG0104 1 MMNVVVVGAQWGDEGKGKIVDYLADRADVVVRYQGGHNAGHTVV-VNGEKYKLHLIPSGILRPGATLVIGNGVVVDPEVL 79 (430)
T ss_pred CceEEEEeCccccCCCceeeeeeccCcCEEEEccCCCCCCcEEE-ECCEEEEEEeccccccCCCceEEEcCcEEECHHHH
Confidence 67889999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCC-CCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHH
Q 045536 94 FNEIDDLEANGVSC-KGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFP 172 (438)
Q Consensus 94 ~~Ei~~L~~~g~~~-~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~ 172 (438)
++|+++|+++|++. .+||+||+|||||+|||+++|+++|..++.++||||||||||||+||++|+|||++||+|++.|+
T Consensus 80 ~~Ei~~L~~~g~~~~~~rL~Is~~ahlIlpyH~~lD~~~E~~~~~~kIGTTgrGIGPaY~DKv~R~giRv~DL~d~~~l~ 159 (430)
T COG0104 80 LKEIEELEERGVDVVRDRLRISDRAHLILPYHIELDRAREKALGKKKIGTTGRGIGPAYEDKVARRGIRVGDLLDPETLR 159 (430)
T ss_pred HHHHHHHHhcCCccccccEEEccCcccccHHHHHHhhhhhhhcCCCcccCCCCccChhhhhhHhhhhhhhhhhcCHHHHH
Confidence 99999999999974 47999999999999999999999998888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccC-CCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcc
Q 045536 173 QKLDFLLSNAAARFPG-FKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFV 251 (438)
Q Consensus 173 ~kL~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~V 251 (438)
+||+.+++++|..+.+ ++.++.++++++++|++++++++||++|+..+|++|+++||+||||||||+|||+||||||||
T Consensus 160 ~kle~~~~~~n~~l~~~y~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~a~~~g~~VLfEGAQG~lLDidhGTYPyV 239 (430)
T COG0104 160 EKLERLLEYKNFQLVKYYGAEAVDFEDILDEYYEYAERLKPYVTDVSVLLNDALDAGKRVLFEGAQGTLLDIDHGTYPYV 239 (430)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhcchhhhhHHHHHHHHHcCCeEEEEcCccceecccCCcCccc
Confidence 9999999999977776 677788899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHH
Q 045536 252 TSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYC 331 (438)
Q Consensus 252 TSS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya 331 (438)
|||||+|+++++|+|++|+.|++||||+|||+||||+||||||+++|.|++||+.|+|||+||||||||||||+|++|||
T Consensus 240 TSSNttagg~~~gsGvgP~~i~~ViGV~KAYtTRVG~GPFPTEl~de~ge~l~~~G~EyGttTGR~RRcGWfD~v~~r~A 319 (430)
T COG0104 240 TSSNTTAGGVATGSGVGPTKIDYVIGVFKAYTTRVGEGPFPTELFDEVGEKLREVGHEYGTTTGRPRRCGWFDAVLLRYA 319 (430)
T ss_pred ccCCcchhheeccCCCCccccceEEEEEEEeeccccCCCCCcccchHHHHHHhhcCceecccCCCCccccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHH
Q 045536 332 CQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQF 411 (438)
Q Consensus 332 ~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~y 411 (438)
+++||+|+|||||||||++|++||||++|++ ||+++++||++++.|++|+||||+||||+++++++++|++||+||++|
T Consensus 320 ~~iNG~t~laiTKlDvLdgl~~ikiCv~Y~~-dG~~id~~P~~~~~~~~~~PiYe~~pGW~~~~~g~~~~~~LP~~A~~Y 398 (430)
T COG0104 320 VRINGITGLAITKLDVLDGLDEIKICVAYEI-DGKRIDYFPADLDDLARCEPIYETLPGWSEDTTGVKSYDDLPENARKY 398 (430)
T ss_pred HhhcCccceeeeeeehhcCCCcceeEEEEec-CCceeeecccchhhhhcCceeeeccCCCccccccccchHHcCHHHHHH
Confidence 9999999999999999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEeeCCCcccccc
Q 045536 412 VERIEELVGVPINYIGVGPGRDALIF 437 (438)
Q Consensus 412 i~~iE~~~gvpi~~is~Gp~r~~~i~ 437 (438)
|++||+++|+||.+||+||+|+|||.
T Consensus 399 i~~iEE~~gvPV~iistGP~R~~ti~ 424 (430)
T COG0104 399 IKRIEELVGVPVTIISTGPEREDTII 424 (430)
T ss_pred HHHHHHHHCCCEEEEecCCChhheEE
Confidence 99999999999999999999999985
No 2
>TIGR00184 purA adenylosuccinate synthase. Alternate name IMP--aspartate ligase.
Probab=100.00 E-value=2e-165 Score=1265.08 Aligned_cols=418 Identities=50% Similarity=0.872 Sum_probs=409.9
Q ss_pred EEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHHHHHH
Q 045536 18 GVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEI 97 (438)
Q Consensus 18 ~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l~~Ei 97 (438)
+|||+|||||||||||||||+++|+|||||||+||||||+ ++|+||+|||||||+|+|+++|+|||||||||+.|++||
T Consensus 1 vVvG~QwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~vIG~GvVidp~~l~~Ei 79 (425)
T TIGR00184 1 VVVGGQWGDEGKGKIVDLLADKPDIVARYQGGHNAGHTIV-IDGVKYGLHLIPSGFLYPDAKLLIGNGVVVDPEVLLKEM 79 (425)
T ss_pred CeEcCccCCCCCchhehhhccCCCEEEEcCCcCCCCcEEE-ECCEEEEEEecCccccCCCceEEECCeEEEcHHHHHHHH
Confidence 5899999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHHHHHH
Q 045536 98 DDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDF 177 (438)
Q Consensus 98 ~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~kL~~ 177 (438)
++|+++|+++.+||+||+||||+||||+++|+++|.+++.++||||||||||||+||++|.|||++||+|++.|++||+.
T Consensus 80 ~~L~~~g~~~~~rL~Is~rahli~p~H~~lD~~~E~~~g~~~IGTT~rGIGPaY~dK~~R~giR~~Dl~~~~~~~~kl~~ 159 (425)
T TIGR00184 80 EYLEKRGISVRDRLFVSYRCHLILPYHKKLDKAREKSKLAKKIGTTGKGIGPAYEDKVARSGLRVGDLLDDEAFAEKAKN 159 (425)
T ss_pred HHHHHcCCCCCCCEEEeCCCCCCCCchHHHHHHhHHhcCCCCcCCCCCCcHHHHHHHhhccccchhhhcCHHHHHHHHHH
Confidence 99999999877899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccC-CCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcccCCCC
Q 045536 178 LLSNAAARFPG-FKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSP 256 (438)
Q Consensus 178 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~VTSS~t 256 (438)
+++++|..+.+ ++..+.++++++++|.+++++|+||++|+..+|++++++||+||||||||+|||+|||||||||||||
T Consensus 160 ~~~~~n~~~~~~y~~~~~~~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~vLfEGAQG~lLDid~GtYPfVTSS~t 239 (425)
T TIGR00184 160 ILEYLNEQLVKYYKDEGVDYEKKLDEYMKYAEELKPFVVDVSVELNEALDEGEKVLFEGAQGTMLDIDYGTYPYVTSSNT 239 (425)
T ss_pred HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHCCCeEEEEcchhhhhhhccCcCcCccCcCC
Confidence 99999988876 45566789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHHHHhcC
Q 045536 257 SAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQING 336 (438)
Q Consensus 257 ~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya~~ing 336 (438)
+++++|+|+|++|+.|++||||+|||+||||+||||||++++.+++||+.|+|||+||||||||||||+|++|||+++||
T Consensus 240 ~agg~~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~g~E~GttTGRpRR~GwlD~v~lrya~~ing 319 (425)
T TIGR00184 240 TAGGVATGVGIGPTKVDEVIGVFKAYTTRVGAGPFPTELSDEEGEKLGTKGAEFGTTTGRRRRCGWFDLVAARYACRLNG 319 (425)
T ss_pred hHHHHHhccCCCccccceEEEEEEeccccccCCCCCcccchhHHHHHHhccCcccCcCCCCceeecchHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHHHHHHH
Q 045536 337 FSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIE 416 (438)
Q Consensus 337 ~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~iE 416 (438)
+|+||||||||||+|++||||++|++ +|+.+++||+++..|++|+|||++||||+++++++++|++||++||+||++||
T Consensus 320 ~t~lalTkLDvL~~~~~ikic~~Y~~-~g~~~~~~P~~~~~l~~~~PvYe~~~GW~~~~~~~~~~~~LP~~a~~yi~~iE 398 (425)
T TIGR00184 320 ATQLALTKLDVLDGIDEIKVCVAYRM-KGEILELFPLDLKDLKGVEPIYETLPGWDKECTGVTEYSDLPENAKKYIERIE 398 (425)
T ss_pred CCeEEEecccccCCCCeeeEEEEEee-CCEEeeeCCCChhhhcccEEEEEEcCCCccccccCcchhhCCHHHHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEEEeeCCCcccccc
Q 045536 417 ELVGVPINYIGVGPGRDALIF 437 (438)
Q Consensus 417 ~~~gvpi~~is~Gp~r~~~i~ 437 (438)
+++|+||.|||+||+|+|||.
T Consensus 399 ~~~g~pV~~is~Gp~R~~~I~ 419 (425)
T TIGR00184 399 ELTGVPVTIISTGPEREQTID 419 (425)
T ss_pred HHHCCCEEEEEcCCChHHeEE
Confidence 999999999999999999986
No 3
>PLN02513 adenylosuccinate synthase
Probab=100.00 E-value=8.3e-165 Score=1262.52 Aligned_cols=425 Identities=81% Similarity=1.299 Sum_probs=413.6
Q ss_pred CcEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHH
Q 045536 14 SQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGL 93 (438)
Q Consensus 14 ~~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l 93 (438)
+++++|||+|||||||||||||||+++|+|||||||+||||||+.++|+||+|||||||+|+|+++|+|||||||||+.|
T Consensus 2 ~~~~vVvG~QwGDEGKGKivD~La~~~d~VvR~qGG~NAGHTvv~~~g~k~~lhliPSGil~~~~~~vIG~GvVvdp~~L 81 (427)
T PLN02513 2 SQVSAVLGTQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNDEGKKFALHLVPSGILNEKTTCVIGNGVVVHLPGL 81 (427)
T ss_pred CceEEEEecCccCCCCceeehhhccCCCEEEEcCCcCCCCceEEecCCeEEEEEecCccccCCCcceEECCcEEEcHHHH
Confidence 56889999999999999999999999999999999999999999339999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHH
Q 045536 94 FNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQ 173 (438)
Q Consensus 94 ~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~ 173 (438)
++||++|+++|++..+||+||+||||+||||+++|+++|.+++.++||||||||||||+||++|.|||++||+|++.|++
T Consensus 82 ~~Ei~~L~~~Gv~~~~rl~Is~rahli~P~H~~~D~~~E~~~g~~~IGTT~rGIGPaY~dK~~R~giR~~Dl~~~~~~~~ 161 (427)
T PLN02513 82 FEEIDGLESNGVSCEGRLLVSDRAHLLFDFHQEVDGLREAELAGSKIGTTKRGIGPAYSSKATRNGLRVGDLRHMDTFAE 161 (427)
T ss_pred HHHHHHHHHcCCCCCCCEEEcCCCCcCChHHHHHHHhhHHhcCCCCcCCCCCCchHhhhhhhhccccchhhhcCHHHHHH
Confidence 99999999999987679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcccC
Q 045536 174 KLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVTS 253 (438)
Q Consensus 174 kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~VTS 253 (438)
||+.++++++.++..+..+...+++++++|++++++|+||++|+..+|++++++||+||||||||+|||+||||||||||
T Consensus 162 kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~v~D~~~~l~~al~~gk~iLfEGAQG~lLDid~GtYP~VTS 241 (427)
T PLN02513 162 KLRELLADAAARFEGFEYDASMVEEEVEAYKKFAERLEPFITDTVHYLNEAIQAGKKILVEGAQATMLDIDFGTYPFVTS 241 (427)
T ss_pred HHHHHHHHHHHHHhhccCCCccHHHHHHHHHHHHHHhccccccHHHHHHHHHHcCCcEEEEccchhhcccccCcCCccCC
Confidence 99999999999988775554558899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHHHH
Q 045536 254 SSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQ 333 (438)
Q Consensus 254 S~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya~~ 333 (438)
|||+++++|+|+|++|+.|++||||+|||+||||+||||||++++.++.||+.|+|||+||||||||||||+|++|||++
T Consensus 242 S~t~a~g~~~g~Gi~p~~i~~ViGV~KAY~TRVG~GPFPTEl~~~~g~~lr~~G~E~GttTGRpRR~GwfD~v~lrya~~ 321 (427)
T PLN02513 242 SNPSAGGICTGLGIAPRKLGDIIGVVKAYTTRVGSGPFPTELFGELGDLLREAGQEFGTTTGRPRRCGWLDIVALKYSCQ 321 (427)
T ss_pred CCchHHHHhhccCCCccccceEEEEEEeccccccCCCCCccccchHHHHHhhccCcccCcCCCCceeccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHHHH
Q 045536 334 INGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVE 413 (438)
Q Consensus 334 ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~ 413 (438)
+||+|+|||||||||+++++||||++|++++|+.++.||++++.|++|+|||++||||+++++++++|++||++|++||+
T Consensus 322 ing~t~lalTkLDvL~~~~~ikvc~~Y~~~~g~~~~~~P~~~~~l~~~~Pvye~~~GW~~~~~~~~~~~~LP~~a~~yi~ 401 (427)
T PLN02513 322 INGFTSLNLTKLDVLSGLPEIKIGVAYKTPDGKVVKSFPADLDTLEQVEVVYEVLPGWQEDISSVRNYDDLPAAAQAYVE 401 (427)
T ss_pred hcCCCeEEEecceecCCCCeeEEEEEEEcCCCcEeccCCcchhhhccceEEEEEcCCCccccccCcchhhcCHHHHHHHH
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEEeeCCCccccccC
Q 045536 414 RIEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 414 ~iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
+||+++|+||.+||+||+|+|||.+
T Consensus 402 ~IE~~~g~pv~~is~Gp~R~~~i~~ 426 (427)
T PLN02513 402 RIEELVGVPVHYIGVGPGRDALIVK 426 (427)
T ss_pred HHHHHHCCCEEEEEcCCCHHHeEec
Confidence 9999999999999999999999864
No 4
>PRK13786 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=1.8e-164 Score=1257.70 Aligned_cols=419 Identities=43% Similarity=0.753 Sum_probs=407.1
Q ss_pred EEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHHHH
Q 045536 16 VSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFN 95 (438)
Q Consensus 16 ~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l~~ 95 (438)
+++|||+|||||||||||||||+++|+|||||||+||||||+ ++|+||+|||||||+|+++ +|+|||||||||+.|++
T Consensus 2 ~~vVvG~QwGDEGKGKivD~La~~~d~VvR~qGG~NAGHTVv-~~g~k~~lhliPSGil~~~-~~vIG~GvVidp~~L~~ 79 (424)
T PRK13786 2 FTIITGAQFGDEGKGKIVDLLAKDYDIVARFQGGDNAGHTVK-VGDEVYKLHLIPSGFLLDA-RVLIGPGVVLNPEVLAE 79 (424)
T ss_pred eEEEEecCcCCCCCchhhhhhhcCCCEEEECCCcCCCCcEEE-ECCEEEEEEecCceecCCC-ceEECCCEEEcHHHHHH
Confidence 689999999999999999999999999999999999999999 8999999999999999987 99999999999999999
Q ss_pred HHHHHHHCCCCC-CCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHHH
Q 045536 96 EIDDLEANGVSC-KGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQK 174 (438)
Q Consensus 96 Ei~~L~~~g~~~-~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~k 174 (438)
||+.|+++|+++ .+||+||+||||+||||+++|+++|..++ ++||||||||||||+||++|.|||++||+|++.|++|
T Consensus 80 Ei~~L~~~Gv~~~~~rL~Is~rahli~P~H~~lD~~~E~~~g-~~IGTT~rGIGPaY~DK~~R~giR~~Dl~~~~~~~~k 158 (424)
T PRK13786 80 EIDMLEKHGVKVDAEKLGIDAKTSIIMPYHIELDGLRESART-EKIGTTKRGIGFAYIDKIARDEVRMSDLVDKERLMRR 158 (424)
T ss_pred HHHHHHHCCCCCCcCcEEEcCCCCcCChHHHHHhhhhHHhcC-CCCCCCCCCchHhHHHHhhCccceeehhcCHHHHHHH
Confidence 999999999986 47999999999999999999999999998 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCC-CCCC-CCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCccc
Q 045536 175 LDFLLSNAAARFPGF-KYTP-HMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVT 252 (438)
Q Consensus 175 L~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~VT 252 (438)
|+.+++++|..+..+ +..+ .++++++++|.+++++|+|||+|+..+|++++++||+||||||||+|||+|||||||||
T Consensus 159 l~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~v~Dt~~~l~~al~~gk~vLfEGAQG~lLDid~GtYP~VT 238 (424)
T PRK13786 159 LEELAPQKEKEIKELGGDPSIVRDEALIDKYLELGRQLAPYITDVSYEINKALDEGKSVLAEGAQGTHLDVIHGTQKFVT 238 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhccccCHHHHHHHHHHcCCcEEEEecchhhhccccCcCCccc
Confidence 999999999888763 3333 56789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHHH
Q 045536 253 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCC 332 (438)
Q Consensus 253 SS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya~ 332 (438)
||||+++|+|+|+|++|..|++||||+|||+||||+||||||++++.|++||+.|+|||+||||||||||||+|++|||+
T Consensus 239 SSntta~ga~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~G~E~GttTGRpRR~GwlD~v~lrya~ 318 (424)
T PRK13786 239 SSSTIAGSACANLGVGPTRVDNVLGIVKAYITRVGEGPLPTELKDEAGEHLQDVGGEFGTTTGRPRRCGWFDLPLLKKAI 318 (424)
T ss_pred cCCcchhhhhhccCCCccccceEEEEEEeecccccCCCCCcccchHHHHHHhhccCcccCcCCCCcccccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHHH
Q 045536 333 QINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFV 412 (438)
Q Consensus 333 ~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi 412 (438)
++||+|+|||||||||+++++||||++|++ +|+.+++||++++.|++|+|||++||||+++++++|+|++||++||+||
T Consensus 319 ~ing~t~lalTkLDvL~~~~~ikvc~~Y~~-~g~~~~~~p~~~~~l~~~~PvYe~~~GW~~~~~~~~~~~~LP~~a~~yi 397 (424)
T PRK13786 319 YLNGYTEIALTKLDVLTGLDPIKICVGYEL-DGEILDYPPELTSDLARCVPVYEELEGWSTDLTEVKAYEDLPENARNYV 397 (424)
T ss_pred HHcCCCeEEeeCccccCCCCceeEEEEEee-CCEEcccCCcChhhhcccEEEEEecCCCccccccCcchhhcCHHHHHHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEeeCCCccccccC
Q 045536 413 ERIEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 413 ~~iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
++||+++|+||.|||+||+|+|||.+
T Consensus 398 ~~iE~~~gvpv~~is~Gp~R~~~I~~ 423 (424)
T PRK13786 398 ERLEELMGVPIKYISVGPGREQTFKK 423 (424)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHhhcc
Confidence 99999999999999999999999964
No 5
>PRK13787 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=1.8e-164 Score=1257.35 Aligned_cols=420 Identities=43% Similarity=0.817 Sum_probs=408.5
Q ss_pred CcEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHH
Q 045536 14 SQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGL 93 (438)
Q Consensus 14 ~~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l 93 (438)
|+.++|||+|||||||||||||||+++|+|||||||+||||||+ ++|+||+|||||||+|+|+++|+|||||||||+.|
T Consensus 1 m~~~vVvG~QwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~vIG~GvVi~p~~L 79 (423)
T PRK13787 1 MPASLVVGTQWGDEGKAKVIDFLSKDTDIIVRYQGGANAGHTVV-VHGKKYVFHLVPSGVIYDQTICVIGNGVVLDPLFF 79 (423)
T ss_pred CCcEEEEeCCcCCCCCchhhhhhcccCCEEEECCCcCCCCcEEE-ECCEEEEEEecCccccCCCccEEecCcEEECHHHH
Confidence 56789999999999999999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHh-cCCcccccCCccchhhcccccCCCCeEEeCCCCCcHH
Q 045536 94 FNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAEL-VKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFP 172 (438)
Q Consensus 94 ~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~-g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~ 172 (438)
++||++|+++|+++.+||+||+||||+||||+++|+++|.++ +.++||||||||||||+||++|.|||++||+|+ .|+
T Consensus 80 ~~Ei~~L~~~Gv~~~~rl~Is~rahli~P~H~~lD~~~E~~~~g~~~IGTT~rGIGPaY~dK~~R~giR~~Dl~~~-~~~ 158 (423)
T PRK13787 80 IEECDRLQKEGFPVKDKLLLSDACHLLFPYHSQIDSARETTSSQEHKIGTTKKGIGICYADKMMRTGLRVGDLLDK-SYK 158 (423)
T ss_pred HHHHHHHHHcCCCCcCCEEEeCCccCcCchHHHHhhhhHHhhcCCCccCCCCCCchHhhhhhhhcccccHHHhcCH-HHH
Confidence 999999999999876799999999999999999999999988 788999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhccC-CCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcc
Q 045536 173 QKLDFLLSNAAARFPG-FKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFV 251 (438)
Q Consensus 173 ~kL~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~V 251 (438)
+||+.+++.++..+.. ++..+.++++++++|++++++|+||++|+..+|++|+++||+||||||||+|||+||||||||
T Consensus 159 ~kl~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~a~~~gk~vLfEGAQG~lLDid~GtYPyV 238 (423)
T PRK13787 159 RRLKHLVDEKNRELDKLYGMPPVSYNDINDGLKFFLSKVGKNIINTAYYLDTELKKGKRVLLEGAQGTGLDVDFGTYPYV 238 (423)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHCCCeEEEEechhhhhhcccCcCCCc
Confidence 9999999999987776 455667889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHH
Q 045536 252 TSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYC 331 (438)
Q Consensus 252 TSS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya 331 (438)
|||||+++|+|+|+|++|+.|++||||+|||+||||+||||||++++.+++||+.|+|||+||||||||||||+|+||||
T Consensus 239 TSSnt~agga~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~G~E~G~tTGRpRR~GWlD~v~lrya 318 (423)
T PRK13787 239 TSSNPTTGGALIGTGISFQHLKHVIGITKAYTTRVGEGPFPTELLGEAGEVLRQKGGEFGATTGRPRRCGWFDVEMLKHS 318 (423)
T ss_pred CCCCchhhhhhhccCCCccccceEEEEEEeccccccCCCCCccccchHHHHHHhhcCccCCccCCCceeecchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHH
Q 045536 332 CQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQF 411 (438)
Q Consensus 332 ~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~y 411 (438)
+++||+|+|+||||||||++++||||++|++ +|+++++||++ .|++|+||||+||||+++++++|+|++||++||+|
T Consensus 319 ~~ing~t~lalTkLDvL~~~~~ikvc~~Y~~-~G~~~~~~P~~--~l~~~~PvYe~~~GW~~~~~~~~~~~~LP~~a~~y 395 (423)
T PRK13787 319 VRINGITSIALTKIDILSDYDTIPVAVGYKL-NGKTLDCFPSQ--GLEKVEPLYEEFPGWKDDISGINEFQKLPEKCKNY 395 (423)
T ss_pred HHhcCCceEEEecccccCCCCceeEEEEEee-CCeEeccCChh--hhcCceEEEEECCCCccccccCCchhhcCHHHHHH
Confidence 9999999999999999999999999999999 99999999996 89999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEeeCCCccccccC
Q 045536 412 VERIEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 412 i~~iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
|++||+++|+||.|||+||+|+|||..
T Consensus 396 i~~iE~~~g~pi~~is~Gp~R~~~I~~ 422 (423)
T PRK13787 396 ISALEKWIGVKINLVSTGPDRKDTIIG 422 (423)
T ss_pred HHHHHHHHCCCEEEEEcCCChhheEec
Confidence 999999999999999999999999863
No 6
>PTZ00350 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=4.3e-163 Score=1252.51 Aligned_cols=427 Identities=56% Similarity=0.964 Sum_probs=414.9
Q ss_pred CCcccccccCcEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecC
Q 045536 5 ESPNRIELLSQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGN 84 (438)
Q Consensus 5 ~~~~~~~~~~~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~ 84 (438)
.|++ ...+++++|||+|||||||||||||||+++|+|||||||+||||||+ ++|+||+|||||||+|+|+++|+|||
T Consensus 5 ~~~~--~~~~~~~vVvG~qwGDEGKGKivD~La~~~d~VvR~qGG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~vIG~ 81 (436)
T PTZ00350 5 DSLN--GLKSKVVVILGAQWGDEGKGKLVDILSEKADIVARFNGGANAGHTIV-VDGKKYALHLLPCGILYPNCINVLGN 81 (436)
T ss_pred eecc--CCCCceEEEEecCcCCCCCchhhhhhccCCCEEEEeCCcCCCCcEEE-ECCEEEEEEeCCccccCCCcceEECC
Confidence 3566 77888999999999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred CeEechHHHHHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHh--cCCcccccCCccchhhcccccCCCCeE
Q 045536 85 GVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAEL--VKSFIGTTRRGIGPAYSSKVIRSGIRV 162 (438)
Q Consensus 85 GvVi~p~~l~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~--g~~~iGTTg~GIGpay~dk~~R~gir~ 162 (438)
||||||+.|++||++|+++|+++.+||+||+|||||||||+++|+++|..+ +.++||||||||||||+||++|.|||+
T Consensus 82 GvVidp~~L~~Ei~~L~~~Gv~~~~rL~Is~rahli~P~H~~lD~~~E~~~~~g~~~iGTT~rGIGPaY~dk~~R~giR~ 161 (436)
T PTZ00350 82 GVVIHLPSLLEEIEQLTKKGINLLGRLYISDRAHLVFDLHQAIDGIQESEKGKGGTQIGTTKRGIGPCYSTKASRTGLRV 161 (436)
T ss_pred cEEEcHHHHHHHHHHHHHcCCCCCCCEEEcCCCCcCChHHHHHHhhhhhhhhcCCCCcCCCCCCchHhhhhhhhccccch
Confidence 999999999999999999999877899999999999999999999999974 788999999999999999999999999
Q ss_pred EeCCCCCcHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccc
Q 045536 163 SDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLD 242 (438)
Q Consensus 163 ~DL~~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLD 242 (438)
+||+|++.|++||+.++++++..+..+ +.+++++++++++++++|+|||+|+..+|++++++||+||||||||+|||
T Consensus 162 ~Dl~~~~~~~~kl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~p~v~D~~~~l~~al~~gk~vLfEGAQG~lLD 238 (436)
T PTZ00350 162 GDLLNFETFEKKYRKLVEKLQEQYNIE---EYDAEEELERYKGYAEKLKDMIVDTVYFMNKAIKEGKRVLVEGANATMLD 238 (436)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHhccc---CCCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHCCCcEEEEechhhhhh
Confidence 999999999999999999999887765 35689999999999999999999999999999999999999999999999
Q ss_pred cCCCcCCcccCCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCccccc
Q 045536 243 IDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGW 322 (438)
Q Consensus 243 id~GtYP~VTSS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~Gw 322 (438)
+|||||||||||||+++++|+|+|++|+.|++||||+|||+||||+||||||++++.++.||+.|+|||+||||||||||
T Consensus 239 id~GtYPfVTSSnt~a~ga~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~g~E~GttTGRpRR~Gw 318 (436)
T PTZ00350 239 IDFGTYPYVTSSNTTVGGVCTGLGIPPNAIILVIGVVKAYTTRVGEGPFPTELFDENGDYLRKKGHEYGTTTGRPRRCGW 318 (436)
T ss_pred cccCcCCCcCCCCchhhhhhhccCCCccccceEEEEEEeccccccCCCCCCcCchHHHHHHHhccCcccCcCCCCceecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhcCcceeeeecccccCCCCCceEEEeeeecCCcc--cccCCCChhhhccCeEeEEEcCCCccccccccC
Q 045536 323 LDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTP--IKSFPADLVLLEQLKVEYEVLPGWQSDISSIRN 400 (438)
Q Consensus 323 lDlv~lrya~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~--~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~ 400 (438)
||+|++|||+++||+|+|||||||||+++++||||++|++ +|+. +++||+++..|++|+|||++||||+++++++++
T Consensus 319 ~D~v~lrya~~ing~t~lalTkLDvL~~~~~ikvc~~Y~~-~g~~~~~~~~p~~~~~l~~~~Pvye~~~GW~~~~~~~r~ 397 (436)
T PTZ00350 319 LDIPALRYVQMINGFDSINLTKLDVLSGLKEIKICVNYKN-KGTGLEIGRYPSSIEELEEYEPVYETMPGWKTDISKCKT 397 (436)
T ss_pred chHHHHHHHHHhcCCCeEEEecccccCCCCceEEEEEEEe-CCEEeccccCCCChhHHhccEEEEEEcCCCccccccCcc
Confidence 9999999999999999999999999999999999999999 9998 899999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHhCCCeEEEeeCCCccccccC
Q 045536 401 YSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 401 ~~~LP~~a~~yi~~iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
|++||++|++||++||+++|+||++||+||+|+|||.+
T Consensus 398 ~~~LP~~a~~yi~~iE~~~g~pV~~is~Gp~R~~~I~~ 435 (436)
T PTZ00350 398 FEELPENAQKYVLFIEELLGVPIVWIGVGPNRENMIVK 435 (436)
T ss_pred hhhcCHHHHHHHHHHHHHHCCCEEEEEcCCCHHHeEec
Confidence 99999999999999999999999999999999999974
No 7
>PRK13784 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=4.9e-163 Score=1248.34 Aligned_cols=418 Identities=39% Similarity=0.719 Sum_probs=405.0
Q ss_pred CcEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHH
Q 045536 14 SQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGL 93 (438)
Q Consensus 14 ~~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l 93 (438)
|+.++|||+|||||||||||||||+++|+|||||||+||||||+ ++|+||+|||||||+|+|+++|+|||||||||+.|
T Consensus 1 m~~~vVvG~QwGDEGKGKivD~La~~~d~VvR~qGG~NAGHTvv-~~g~k~~lhliPSGil~~~~~~vIG~GvVi~p~~L 79 (428)
T PRK13784 1 MSNIVIVGAQWGDEGKGKIADTLAEKADLVVRYQGGNNAGHTLV-VNGKKTFLHLIPSGVLHQHTKCVIGHGVVLDPVAL 79 (428)
T ss_pred CCcEEEEeCCcCCCCcchhhhhhcccCCEEEEeCCcCCcCcEEE-ECCEEEEEeecCceecCCCceEEECCcEEEcHHHH
Confidence 56789999999999999999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCC-CCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHH
Q 045536 94 FNEIDDLEANGVSC-KGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFP 172 (438)
Q Consensus 94 ~~Ei~~L~~~g~~~-~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~ 172 (438)
++||+.|+++|+++ .+||+||+||||+||||+++|+++|..++ ++||||||||||||+||++|.|||++||+|++.|+
T Consensus 80 ~~Ei~~L~~~Gv~~~~~rL~Is~rahli~p~H~~lD~~~E~~~~-~~IGTT~rGIGPaY~dK~~R~giR~~Dl~~~~~~~ 158 (428)
T PRK13784 80 DEEITRLQAKGIAISAENLFVSESCTIITSYHKLLDAVRESNTS-EKIGTTGKGIGPAYEDKVSRKGIKFKHLFDKDLLR 158 (428)
T ss_pred HHHHHHHHhcCCCCCCCCEEEcCCCCcCChHHHHHhhhhHHhcC-CCCCCCCCcchHhHHHHHhcccchhhhhcCHHHHH
Confidence 99999999999986 47999999999999999999999999887 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccC-CCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcc
Q 045536 173 QKLDFLLSNAAARFPG-FKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFV 251 (438)
Q Consensus 173 ~kL~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~V 251 (438)
+||+.+++++|..+.. ++..+.++++++++|.+++++|+|||+|+..+|++++++||+||||||||+|||+||||||||
T Consensus 159 ~kl~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~v~Dt~~~l~~a~~~gk~vLfEGAQG~lLDid~GTYPyV 238 (428)
T PRK13784 159 SRLAISLAEKETLFRDLYKVEYPTLEQEFDKLFALGQKLKQYAADTFSIIDQAIAAGKNVVYEGAQGVLLDVDYGTYPFV 238 (428)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhhhhcccHHHHHHHHHHcCCcEEEEeccceeeccccCcCCcc
Confidence 9999999999988876 344567789999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHH
Q 045536 252 TSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYC 331 (438)
Q Consensus 252 TSS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya 331 (438)
|||||+++|+|+|+|++|+.|++||||+|||+||||+||||||++++.+++||+.|+|||+||||||||||||+|++|||
T Consensus 239 TSSntta~ga~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFpTEl~~e~g~~lr~~G~E~GttTGRpRR~GWlD~v~lrya 318 (428)
T PRK13784 239 TSSNTSVAGVYSGATTAGHGLDHVIGITKAYTTRVGEGPFPTELFDDVGKFIQHKGGEIGVTTGRIRRCGWLDLPLLKYS 318 (428)
T ss_pred cCCCcchhhhhhccCCCCcccceEEEEEEeccccccCCCCCcccchHHHHHHHHcCceecccCCCCcccccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcceeeeecccccCCCCCceEEEeeeecCCccccc-CCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHH
Q 045536 332 CQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKS-FPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQ 410 (438)
Q Consensus 332 ~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~-~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~ 410 (438)
+++||+|+|||||||||+++++||||++|++ +|+++++ || +. .+++|+|||++||||+ ++++++|++||++||+
T Consensus 319 ~~ing~t~lalTkLDvL~~~~~ikic~~Y~~-~g~~~~~~~P-~~-~~~~~~pvYe~~~GW~--~~~~~~~~~LP~~a~~ 393 (428)
T PRK13784 319 AKCSNLTSIALTKVDVLSDMDTLKVCIGYKY-EGKEIYCAYP-GI-DLYKVEPILVEMEPFS--IDETVTKDNMPAALKT 393 (428)
T ss_pred HHhcCCCeEEEecccccCCCCcceEEEEEEe-CCEEecccCC-hh-hhccceEEEEecCCcc--ccCcCchHHcCHHHHH
Confidence 9999999999999999999999999999999 9999987 99 55 8999999999999998 9999999999999999
Q ss_pred HHHHHHHHhCCCeEEEeeCCCccccccC
Q 045536 411 FVERIEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 411 yi~~iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
||++||+++|+||.|||+||+|+|||.+
T Consensus 394 Yi~~iE~~~g~pi~~is~Gp~R~~~I~~ 421 (428)
T PRK13784 394 YLKTIENHVGIPISSLAYGPSREQILFF 421 (428)
T ss_pred HHHHHHHHHCCCEEEEECCCChHHEEEe
Confidence 9999999999999999999999999863
No 8
>PRK01117 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=1.8e-162 Score=1248.67 Aligned_cols=422 Identities=51% Similarity=0.891 Sum_probs=412.1
Q ss_pred CcEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHH
Q 045536 14 SQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGL 93 (438)
Q Consensus 14 ~~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l 93 (438)
|+.++|||+|||||||||||||||+++|+|||||||+||||||+ .+|+||+|||||||+|+|+++|+||+||||||+.|
T Consensus 1 m~~~vVvG~qwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTVv-~~g~k~~lhllPSGil~~~~~~viG~GvVv~p~~L 79 (430)
T PRK01117 1 MKNVVVVGTQWGDEGKGKIVDLLSERADVVVRFQGGHNAGHTLV-IDGKKYKLHLIPSGILRPGKTCVIGNGVVLDPEAL 79 (430)
T ss_pred CCcEEEEecccCCCCCceeeeeecccCCEEEEcCCcCCCCcEEE-ECCEEEEEEecCccccCCCccEEECCeEEECHHHH
Confidence 56789999999999999999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHH
Q 045536 94 FNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQ 173 (438)
Q Consensus 94 ~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~ 173 (438)
++||++|+++|++..+||+||+||||+||||+++|+++|.+++.++||||||||||||+||++|.|||++||+|++.|++
T Consensus 80 ~~Ei~~l~~~g~~~~~rL~Is~ra~li~p~H~~lD~~~E~~rg~~~iGTT~rGIGpay~dk~~R~gir~~Dl~~~~~l~~ 159 (430)
T PRK01117 80 LKEIDELEARGVDVRERLRISERAHLILPYHRALDKAREKARGKKKIGTTGRGIGPAYEDKVARRGIRVGDLLDPETFAE 159 (430)
T ss_pred HHHHHHHHHcCCCCCCCEEEeCCCCCCCchHHHHhhhhHHhcCCCCCCCCCCCchHHHHHhhhcccccHHHhcCHHHHHH
Confidence 99999999999987689999999999999999999999999998999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccC-CCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCccc
Q 045536 174 KLDFLLSNAAARFPG-FKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVT 252 (438)
Q Consensus 174 kL~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~VT 252 (438)
||+.++++++..+.. ++..+.+++++++++.+++++|+|||+|+..+|++++++||+||||||||+|||+|||||||||
T Consensus 160 kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~al~~gk~vLfEGAQG~lLDid~GtYP~VT 239 (430)
T PRK01117 160 KLEENLEYKNFLLTKYYGAEAVDFEEILDEYLEYAERLKPYVTDTSLLLNDALKAGKRVLFEGAQGTLLDIDHGTYPFVT 239 (430)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHCCCeEEEEechhhhhccccCcCCCcC
Confidence 999999999988876 4556677899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHHH
Q 045536 253 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCC 332 (438)
Q Consensus 253 SS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya~ 332 (438)
||||+++|+|+|+|++|+.|++||||+|||+||||+||||||++++.+++||+.|+|||+||||||||||||+|++|||+
T Consensus 240 SS~tt~~g~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFpTEl~~e~g~~lr~~g~E~GttTGRpRR~GwlD~v~lrya~ 319 (430)
T PRK01117 240 SSNTTAGGAATGSGVGPTKIDYVLGIAKAYTTRVGSGPFPTELFDEVGEHLRERGHEFGTTTGRPRRCGWFDAVALRYAV 319 (430)
T ss_pred CcCchhhhhhhccCCCCcccceEEEEEEcCCCcccCCCCCCcCChHHHHHHhhccCeecccCCCcceeecchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHHH
Q 045536 333 QINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFV 412 (438)
Q Consensus 333 ~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi 412 (438)
++||+|+|||||||||+++++||||++|++ +|++++.||+++..|++|+|||++||||+++++++|+|++||++||+||
T Consensus 320 ~ing~~~lalTkLDvL~~~~~ikic~~Y~~-~g~~~~~~P~~~~~l~~~~Pvye~~~GW~~~~~~~r~~~~LP~~a~~yi 398 (430)
T PRK01117 320 RVNGLTGLALTKLDVLDGLEEIKICVAYEL-DGKRIDYFPASLEDLARCEPIYEELPGWSESTTGVRSFDDLPENARKYI 398 (430)
T ss_pred HhcCCCeEEEeCceecCCCCceeEEEEEee-CCEEeeeCCCChhhhcccEEEEEECCCCccccccCcchhhcCHHHHHHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEeeCCCcccccc
Q 045536 413 ERIEELVGVPINYIGVGPGRDALIF 437 (438)
Q Consensus 413 ~~iE~~~gvpi~~is~Gp~r~~~i~ 437 (438)
++||+++|+||.|||+||+|+|||.
T Consensus 399 ~~iE~~~g~pv~~is~Gp~r~~~I~ 423 (430)
T PRK01117 399 KRIEELTGVPISIISTGPDRDQTII 423 (430)
T ss_pred HHHHHHHCCCEEEEEcCCChHHEEE
Confidence 9999999999999999999999986
No 9
>smart00788 Adenylsucc_synt Adenylosuccinate synthetase. Adenylosuccinate synthetase plays an important role in purine biosynthesis, by catalyzing the GTP-dependent conversion of IMP and aspartic acid to AMP. Adenylosuccinate synthetase has been characterized from various sources ranging from Escherichia coli (gene purA) to vertebrate tissues. In vertebrates, two isozymes are present - one involved in purine biosynthesis and the other in the purine nucleotide cycle. The crystal structure of adenylosuccinate synthetase from E. coli reveals that the dominant structural element of each monomer of the homodimer is a central beta-sheet of 10 strands. The first nine strands of the sheet are mutually parallel with right-handed crossover connections between the strands. The 10th strand is antiparallel with respect to the first nine strands. In addition, the enzyme has two antiparallel beta-sheets, comprised of two strands and three strands each, 11 alpha-helices and two short 3/10-helices. Furt
Probab=100.00 E-value=2.4e-161 Score=1238.79 Aligned_cols=420 Identities=55% Similarity=0.926 Sum_probs=410.7
Q ss_pred EEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHHHH
Q 045536 16 VSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFN 95 (438)
Q Consensus 16 ~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l~~ 95 (438)
+++|||+|||||||||||||||+++|+|||||||+||||||+ .+|+||+|||||||+|+|+++|+||+||||||+.|++
T Consensus 1 ~~vVvG~qwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTvv-~~g~k~~lhllPSGil~~~~~~vig~GvVv~p~~L~~ 79 (421)
T smart00788 1 VVVVVGAQWGDEGKGKIVDYLAEKADVVVRFQGGNNAGHTVV-VGGKKYKLHLLPSGILNPNKKCVIGNGVVIDPEALFK 79 (421)
T ss_pred CEEEEecccCCCCCceeeeeccccCCEEEEccccCCCCcEEE-ECCEEEEEEecCccccCCCceEEECCcEEEcHHHHHH
Confidence 368999999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHHHH
Q 045536 96 EIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKL 175 (438)
Q Consensus 96 Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~kL 175 (438)
||++|+++|+++.+||+||+||||++|||+++|+++|.+++..+||||||||||||+||++|.|||++||+|++.|++||
T Consensus 80 Ei~~L~~~Gi~~~~rL~Is~ra~li~p~H~~lD~~~E~~~g~~~iGTT~rGIGpay~dk~~R~gir~~Dl~~~~~~~~kl 159 (421)
T smart00788 80 EIDQLEAKGVDVRDRLFISDRAHLILPYHIALDKLREKARGKKKIGTTGRGIGPAYEDKVARRGIRVGDLFDEDVFREKL 159 (421)
T ss_pred HHHHHHHcCCCCCCCEEEcCCCCCCChHHHHHhhhhHHhcCCCCCCCCCCCcHHHHHHHhhccCcchhhhcCHHHHHHHH
Confidence 99999999998778999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCC-CCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcccCC
Q 045536 176 DFLLSNAAARFPGF-KYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVTSS 254 (438)
Q Consensus 176 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~VTSS 254 (438)
+.++++++..++.+ +.++.+++++++++.+++++|+|||+|+..+|++++++||+||||||||+|||+|||||||||||
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~al~~gk~vLfEGAQG~lLDid~GtYP~VTSS 239 (421)
T smart00788 160 EELLDYKNFLLKKLYGAEPVDVEEILEELLEYAERLKPYVVDVSELLNDALKAGKKVLFEGAQGTLLDIDHGTYPYVTSS 239 (421)
T ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhccceecHHHHHHHHHHCCCeEEEEeCcHhhhccccCcCCCccCc
Confidence 99999999888763 55667899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHHHHh
Q 045536 255 SPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQI 334 (438)
Q Consensus 255 ~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya~~i 334 (438)
||+++++|+|+|++|+.|++||||+|||+||||+||||||++++.+++||+.|+|||+||||||||||||+|++|||+++
T Consensus 240 nt~~~g~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFpTEl~~e~g~~lr~~g~E~GttTGRpRR~GwlD~v~lrya~~i 319 (421)
T smart00788 240 NTTAGGAATGAGIGPTRIDYVIGVVKAYTTRVGEGPFPTELFDETGEKLRERGHEFGTTTGRPRRCGWFDAVLLRYAVRI 319 (421)
T ss_pred cchhhhhhhccCCCccccceEEEEEEeccccccCCCCCcccChHHHHHHhhcCCeeccCCCCCcccccchHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHHHHH
Q 045536 335 NGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVER 414 (438)
Q Consensus 335 ng~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ 414 (438)
||+|+|+|||||||++|++||||++|++ +|+++++||.+++.|++|+|||++||||+++++++++|++||++|++||++
T Consensus 320 ng~~~lalTkLDvL~~~~~ikvc~~Y~~-~g~~~~~~P~~~~~l~~~~PvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ 398 (421)
T smart00788 320 NGITGLALTKLDVLDGLDEIKVCVAYKL-DGKEIDYFPADLEDLERCEPIYETLPGWKEDTTGVRSYEDLPENAKKYIER 398 (421)
T ss_pred cCCCeEEEECceecCCCCceeEEEEEec-CCEEEeeCCCChhhhcccEEEEEECCCCccccccccchhhcCHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCeEEEeeCCCcccccc
Q 045536 415 IEELVGVPINYIGVGPGRDALIF 437 (438)
Q Consensus 415 iE~~~gvpi~~is~Gp~r~~~i~ 437 (438)
||+++|+||+|||+||+|+|||.
T Consensus 399 iE~~~g~pv~~is~Gp~r~~~i~ 421 (421)
T smart00788 399 IEELVGVPVSLISTGPDREQTIV 421 (421)
T ss_pred HHHHHCCCEEEEEcCCCHHhhcC
Confidence 99999999999999999999984
No 10
>PRK13785 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=4.5e-160 Score=1232.28 Aligned_cols=418 Identities=39% Similarity=0.743 Sum_probs=403.5
Q ss_pred EEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHHHH
Q 045536 16 VSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFN 95 (438)
Q Consensus 16 ~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l~~ 95 (438)
+++|||+|||||||||||||||+++|+|||||||+||||||+ ++|+||+|||||||+|++ +.|+|||||||||+.|++
T Consensus 2 ~~vVvG~QwGDEGKGKivD~La~~~dvVvR~~GG~NAGHTVv-~~g~k~~lhliPSGil~~-~~~vIG~GvVvdp~~L~~ 79 (454)
T PRK13785 2 TVTIVGSQLGDEGKGGVVDLYGDAADVVVRYQGGDNAGHTVV-HGGEEYKLSLVPSGAVRG-KIGVLGNGCVVNPETLFD 79 (454)
T ss_pred cEEEEccCcCCCCCceeeeecccCCCEEEEcCCcCCcCcEEE-ECCEEEEEeecCCCccCC-CceEECCcEEEcHHHHHH
Confidence 579999999999999999999999999999999999999999 899999999999999997 889999999999999999
Q ss_pred HHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHh--cCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHH
Q 045536 96 EIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAEL--VKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQ 173 (438)
Q Consensus 96 Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~--g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~ 173 (438)
||++|+++|+++ ||+||+|||||||||+++|+++|..| +.++||||||||||||+||++|+|||++||+|++.|++
T Consensus 80 Ei~~L~~~Gv~~--~l~Is~rahli~P~H~~lD~~~E~~r~~g~~~IGTT~rGIGPaY~DK~~R~giR~~Dl~~~~~~~~ 157 (454)
T PRK13785 80 EIDALRERGLDP--DVRVAERAHVILPYHRVLDGIEEEAKSDSDLEVGTTGRGIGPTYEDKAGRRGVRVGDLLDPDVLRD 157 (454)
T ss_pred HHHHHHhcCCCc--cEEEeCCCcccCHhHHhhhHHhHHhhccCCCccCCCCCCchhhhhhhhhccccchhhhcCHHHHHH
Confidence 999999999984 99999999999999999999999988 56899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCC-CC------CCCCHHHHHHHHHHHHHhhCC--cccChHHHHHHHHHCCCcEEEEeccccccccC
Q 045536 174 KLDFLLSNAAARFPGF-KY------TPHMLREEVEKYKRIAERLEP--FVVDTVHFINESIAQKRKILVEGGQATMLDID 244 (438)
Q Consensus 174 kL~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~l~~--~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid 244 (438)
||+.+++++|.++..+ +. .+.++++++++|.+++++|+| |++|+..+|++++++||+||||||||+|||+|
T Consensus 158 kl~~~~~~~n~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~d~~~~l~~a~~~gk~vLfEGAQG~lLDid 237 (454)
T PRK13785 158 RLEYVVPQKRALAEDVYGLDASETPEAFDVDALFEEYREYGERLAEEDMTVNAGDFLAERIDDGDNVMLEGAQGTSIDID 237 (454)
T ss_pred HHHHHHHHHHHHHHHHhCccccccccCCCHHHHHHHHHHHHHHhCccceeccHHHHHHHHHHcCCeEEEEecchhhhccc
Confidence 9999999999887753 32 256789999999999999999 99999999999999999999999999999999
Q ss_pred CCcCCcccCCCCcccccccccCCCCcccCc--EEEEEeeccccccCCCCCCccCC---------------cccchhhhcc
Q 045536 245 FGTYPFVTSSSPSAGGICTGLGIAPRVVGD--LIGVVKAYTTRVGSGPFPTEILG---------------QGGDHLRLAG 307 (438)
Q Consensus 245 ~GtYP~VTSS~t~a~~~~~g~G~~~~~i~~--viGV~KAY~TRVG~GPfPTE~~~---------------~~g~~lr~~g 307 (438)
||||||||||||+++|+|+|+|++|+.|++ ||||+|||+||||+||||||+++ +++++||+.|
T Consensus 238 ~GtYPyVTSSnt~a~ga~~g~Gi~p~~i~~~~ViGV~KAY~TRVG~GPFPTEl~~~~~~~~~~~~~~~~~e~g~~lr~~G 317 (454)
T PRK13785 238 HGNYPYVTSSNPTAGGAATGTGLGPTVVGQGEVVGIVKAYLSRVGSGPLPTELGGVEGDTPDEGGRPDEEELATYIREEG 317 (454)
T ss_pred cCcCCccCCCCchhhhhhhccCCCcccccCceEEEEEEeecccccCCCCCcccccccccccccccccchHHHHHHHhhcC
Confidence 999999999999999999999999999976 99999999999999999999998 8999999999
Q ss_pred CCCCCCCCCCcccccchHHHHHHHHHhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEE
Q 045536 308 QEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEV 387 (438)
Q Consensus 308 ~E~G~tTGR~RR~GwlDlv~lrya~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~ 387 (438)
+|||+||||||||||||+|++|||+++||+|+|||||||||+++++||||++|++ +|++++.||++.+.|++|+|||++
T Consensus 318 ~E~GttTGRpRR~GWlD~v~lryA~~inG~t~lalTkLDvL~~~~~ikvc~~Y~~-~g~~~~~~P~~~~~l~~~~PvYe~ 396 (454)
T PRK13785 318 GEYGTVTGRPRRVGWLDMPMLRHAARASGFTGLAINHIDVLAGLDEVKVGHSYEL-DGEELLTMPATTERWARCEPNFRS 396 (454)
T ss_pred CcccccCCCCcccccchHHHHHHHHHhcCCCeEEEecccccCCCCceeEEEEEee-CCEEcccCCCChhhhcccEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred cCCCcc-ccccccC--CCCccHHHHHHHHHHHHHhCCCeEEEeeCCCccccccC
Q 045536 388 LPGWQS-DISSIRN--YSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 388 ~~GW~~-~~~~~~~--~~~LP~~a~~yi~~iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
||||++ +++++++ |++||++|++||++||+++|+||.|||+||+|+|||.+
T Consensus 397 ~~GW~~~~~~~~~~~~~~~LP~~a~~yi~~iE~~~g~pv~~is~Gp~R~~~i~~ 450 (454)
T PRK13785 397 FDGWPEVDWAAVAEEGYDALPENARTYLEYVSDELDTPIYAVGVGPGREETVVL 450 (454)
T ss_pred cCCcCcCcccccccCChhhcCHHHHHHHHHHHHHHCCCEEEEEcCCCHHHeEec
Confidence 999998 8999988 99999999999999999999999999999999999864
No 11
>PF00709 Adenylsucc_synt: Adenylosuccinate synthetase; InterPro: IPR001114 Adenylosuccinate synthetase (6.3.4.4 from EC) plays an important role in purine biosynthesis, by catalysing the GTP-dependent conversion of IMP and aspartic acid to AMP. Adenylosuccinate synthetase has been characterised from various sources ranging from Escherichia coli (gene purA) to vertebrate tissues. In vertebrates, two isozymes are present: one involved in purine biosynthesis and the other in the purine nucleotide cycle. The crystal structure of adenylosuccinate synthetase from E. coli reveals that the dominant structural element of each monomer of the homodimer is a central beta-sheet of 10 strands. The first nine strands of the sheet are mutually parallel with right-handed crossover connections between the strands. The 10th strand is antiparallel with respect to the first nine strands. In addition, the enzyme has two antiparallel beta-sheets, comprised of two strands and three strands each, 11 alpha-helices and two short 3/10-helices. Further, it has been suggested that the similarities in the GTP-binding domains of the synthetase and the p21ras protein are an example of convergent evolution of two distinct families of GTP-binding proteins []. Structures of adenylosuccinate synthetase from Triticum aestivum and Arabidopsis thaliana when compared with the known structures from E. coli reveals that the overall fold is very similar to that of the E. coli protein [].; GO: 0000287 magnesium ion binding, 0004019 adenylosuccinate synthase activity, 0005525 GTP binding, 0006164 purine nucleotide biosynthetic process, 0005737 cytoplasm; PDB: 3HID_A 1DJ3_B 2D7U_A 1DJ2_A 1P9B_A 1LON_A 1MF0_A 1LOO_A 1LNY_B 2DGN_A ....
Probab=100.00 E-value=4e-160 Score=1232.90 Aligned_cols=420 Identities=55% Similarity=0.930 Sum_probs=383.2
Q ss_pred EEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHHHH
Q 045536 16 VSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFN 95 (438)
Q Consensus 16 ~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l~~ 95 (438)
+++|||+|||||||||||||||+++|+|||||||+||||||+ .+|+||+|||||||+|+|+++|+||+||||||+.|++
T Consensus 1 ~~vVvG~qwGDEGKGkivD~La~~~d~VvR~~GG~NAGHTVv-~~g~~~~~hliPSGi~~~~~~~~ig~GvVidp~~l~~ 79 (421)
T PF00709_consen 1 VIVVVGLQWGDEGKGKIVDYLAEDADVVVRFNGGANAGHTVV-VDGKKFVFHLIPSGILHPGVKTVIGNGVVIDPEALLE 79 (421)
T ss_dssp EEEEEESSSS-SSHHHHHHHHHTT-SEEEESSBSTTSSEEEE-ETTEEEEESSS-GGGGSTTSEEEE-TTBEEEHHHHHH
T ss_pred CEEEEcCCcccCCCceeehhhcCccCEEEEecCCCCCCCEEE-ECCEEEEEeecceeeecCCceEeecCCEEECHHHHHH
Confidence 579999999999999999999999999999999999999999 8899999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHHHH
Q 045536 96 EIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKL 175 (438)
Q Consensus 96 Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~kL 175 (438)
||++|+++|++..+||+||+||||+||||+++|+++|.+++.++||||||||||||+||++|.|||++||+|++.|++||
T Consensus 80 Ei~~L~~~g~~~~~rl~Is~rahiv~p~H~~lD~~~E~~~g~~~iGTTgrGIGp~y~dk~~R~gir~~DL~~~~~l~~kl 159 (421)
T PF00709_consen 80 EIEELESKGVDVRSRLFISDRAHIVTPYHKALDRLREEARGKGKIGTTGRGIGPAYADKVARRGIRVGDLLDPEVLREKL 159 (421)
T ss_dssp HHHHHHCTTGTHGGTEEEETTSEEE-HHHHHHHHHHHHHCHHTSSSTSSTTHHHHHHHHHTT-S-BGGGGGSHHHHHHHH
T ss_pred HHHHHHhcCCCcccceEeeCceEEecHHHHHhhHHHHHHhccccccCcCCChHHHhhhhccCCCcEeeecCCHHHHHHHH
Confidence 99999999998768999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCC-CCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcccCC
Q 045536 176 DFLLSNAAARFPGF-KYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVTSS 254 (438)
Q Consensus 176 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~VTSS 254 (438)
++++++++++++.+ +.++.+++++++++++++++|+|||+|+..+|++++++||+||||||||+|||+|||||||||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~d~~~~l~~al~~gk~iLfEGAQG~lLDid~GtyP~VTsS 239 (421)
T PF00709_consen 160 KQILDEKNRLLEKLYGEEPLDVEEILEEYLEYAERLKPYVCDTVEFLNEALKEGKKILFEGAQGTLLDIDHGTYPYVTSS 239 (421)
T ss_dssp HHHHHHHHHHHHHCSTT-HHHHHHHHHHHHHHHHHHGGCEE-HHHHHHHHHHTT--EEEEEESEGGG-TTTSSTTSS-SS
T ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhhCceecHHHHHHHHHHcCCcEEEecCcccccccccCcCCCcccC
Confidence 99999999988764 45566799999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHHHHh
Q 045536 255 SPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQI 334 (438)
Q Consensus 255 ~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya~~i 334 (438)
||+++|+++|+|++|+.|++||||+|||+||||+||||||++++.++.||+.|||||+||||||||||||+|++|||+++
T Consensus 240 ~t~~~~a~~g~g~~~~~i~~vigV~KAY~TRvG~GpfpTE~~~~~~~~lr~~g~E~G~~tGr~RR~GwlDlv~lrya~~i 319 (421)
T PF00709_consen 240 NTTAGGACTGLGIPPRRIDRVIGVTKAYTTRVGEGPFPTELFDEVGEKLRERGNEYGTTTGRPRRCGWLDLVALRYAIRI 319 (421)
T ss_dssp --STHHHHHHHT--GGGEEEEEEEEESSEEESSSS--TTBEESHHHHHHHHHTT-BSTTTTSBEEEEEEEHHHHHHHHHH
T ss_pred cchHHHHhhhcCCCCcceeeEEEEEeeccccccCCCCCCcccchHHHHHHhcCcccCCccCCCccccccHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHHHHH
Q 045536 335 NGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVER 414 (438)
Q Consensus 335 ng~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ 414 (438)
||+|+|||||||+||+|++||||++|++ +|++++.||.+...|++|+|||++||||+++++++++|++||+||++||++
T Consensus 320 ng~~~lalTkLDvL~~~~~ikic~~Y~~-~G~~~~~~p~~~~~l~~~~pvy~~~~GW~~d~~~~~~~e~LP~~a~~yi~~ 398 (421)
T PF00709_consen 320 NGITELALTKLDVLDGLDEIKICVAYEY-DGKRIDYFPASIEDLEKCEPVYEELPGWKEDISGIRKYEDLPENAREYIEF 398 (421)
T ss_dssp HTESEEEEE-GGGGTTESEEEEEEEEEE-TTEEESS--SSHHHHTTEEEEEEEEEECSSGCTT--SGGGS-HHHHHHHHH
T ss_pred cCCCeEEEecccccCCCCceEEEEEEEe-CCcEeecCCcchhhcccceEEEEECCCccccccccCChhHcCHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCeEEEeeCCCcccccc
Q 045536 415 IEELVGVPINYIGVGPGRDALIF 437 (438)
Q Consensus 415 iE~~~gvpi~~is~Gp~r~~~i~ 437 (438)
||+++|+||.|||+||+|+|||.
T Consensus 399 IE~~lgvpI~~is~GP~R~~tI~ 421 (421)
T PF00709_consen 399 IEEELGVPITIISVGPEREQTII 421 (421)
T ss_dssp HHHHHTS-EEEEE-SSSTTSEEE
T ss_pred HHHHHCCCEEEEEeCCChHhccC
Confidence 99999999999999999999984
No 12
>PRK13783 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=6e-157 Score=1196.09 Aligned_cols=404 Identities=42% Similarity=0.709 Sum_probs=390.4
Q ss_pred cEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHHH
Q 045536 15 QVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLF 94 (438)
Q Consensus 15 ~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l~ 94 (438)
++++|||+|||||||||||||||+++|+|||||||+||||||+ .+|+||+|||||||+|+|+++|+|||||||||+.|+
T Consensus 1 ~~~vVvG~qwGDEGKGKivD~La~~~d~VvR~qGG~NAGHTVv-~~~~k~~lhliPSGil~~~~~~viG~GvVv~p~~L~ 79 (404)
T PRK13783 1 MKRVIVGLQWGDEGKGKVVTYLSRYYDIVVRYSGGANAGHTVN-YGDFKVVHHLLPSADFKKNVGAAIGNGVVLDLEVLV 79 (404)
T ss_pred CcEEEEcCCcCCCCCchhhhhhccCCCEEEECCCcCCCCcEEE-ECCEEEEEeecCceecCCCccEEECCcEEECHHHHH
Confidence 3679999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHHH
Q 045536 95 NEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQK 174 (438)
Q Consensus 95 ~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~k 174 (438)
+||+.|+++|+++.+||+||+||||+||||+++|+++|..|+ ++||||||||||||+||++|.|||++||+|++.|++|
T Consensus 80 ~Ei~~L~~~g~~~~~rL~Is~rA~li~p~H~~~D~~~E~~rg-~~iGTT~rGIGPaY~dk~~R~giR~~Dl~~~~~l~~k 158 (404)
T PRK13783 80 EELEELKEKFPDYSGRIFISELAHVVLPVHKELDEIIESVRK-NAIGTTKRGIGPAYADKVMRVGVRLADLFDEEKLREF 158 (404)
T ss_pred HHHHHHHHcCCCCCCCEEEcCCCCCCCcHHHHHhhhcHHhcC-CCCCCCCCCcHHHHhhhhcccCcEEehhCCHHHHHHH
Confidence 999999999998878999999999999999999999999998 5999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcccCC
Q 045536 175 LDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVTSS 254 (438)
Q Consensus 175 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~VTSS 254 (438)
|+.++++++..+. .+.+++++++++++++++|+|||+|+. +|+++++ ||+||||||||+|||+|||||||||||
T Consensus 159 l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~v~d~~-~l~~~~~-gk~vLfEGAQG~lLDid~GtYP~VTSS 232 (404)
T PRK13783 159 LEKILSLYKKLYG----IEFDVEKMMEDLLTFYEKIKDLVVSPV-EIKRILE-EKSVLFEGTQGVLLDLDVGTYPYVTSS 232 (404)
T ss_pred HHHHHHHHHHHhC----CCCCHHHHHHHHHHHHHHHhhhcCCHH-HHHHHhc-CCcEEEEecchhhcccccCcCCCcCCC
Confidence 9999999988773 125689999999999999999999998 8999986 999999999999999999999999999
Q ss_pred CCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHHHHh
Q 045536 255 SPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQI 334 (438)
Q Consensus 255 ~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya~~i 334 (438)
||+++++|+|+|+ |..|++||||+|||+||||+||||||++++.+++||+.|+|||+||||||||||||+|++|||+++
T Consensus 233 ntta~g~~~g~Gi-p~~i~~ViGV~KAY~TRVG~GPFPTEl~~e~g~~Lr~~G~E~GttTGRpRR~GwlD~v~lrya~~i 311 (404)
T PRK13783 233 NCSTTGVSAGMGF-PVKVDEVIGVFKAYTTRVGEGPFPTELFGEEGEKLRKAGHEYGATTGRPRRCGWLDLPLLRYAIEV 311 (404)
T ss_pred CchHhhhhhccCC-ccccceEEEEEEeecccccCCCCCccccchHHHHHhhccCcccccCCCCcccccchHHHHHHHHHh
Confidence 9999999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHHHHH
Q 045536 335 NGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVER 414 (438)
Q Consensus 335 ng~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ 414 (438)
||+|+||||||||||++++||||++|++ +|+++ .||.+++.|++|+|||++||||++++ |++||+||++
T Consensus 312 ng~~~lalTkLDvL~~~~~ikic~~Y~~-~g~~~-~~P~~~~~l~~~~Pvye~~~GW~~~~---------p~~a~~yi~~ 380 (404)
T PRK13783 312 SGVDSLVMTKADVLNGFEKIKVCVRYEI-GGKEV-RDPSSLRDLEKAEPVYEEFDGWKSLE---------DKNFLKFVDF 380 (404)
T ss_pred cCCCeEEEechhhhCCCCcccEEEEEee-CCEEE-eCCCChhhhhcceEEEEecCCCCCCc---------HHHHHHHHHH
Confidence 9999999999999999999999999999 99998 69999999999999999999999764 9999999999
Q ss_pred HHHHhCCCeEEEeeCCCccccccC
Q 045536 415 IEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 415 iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
||+++|+||+|||+||+|+|||..
T Consensus 381 iE~~~g~pv~~is~Gp~R~~~i~~ 404 (404)
T PRK13783 381 IERETGRKIAYISTGPKIEEIVEV 404 (404)
T ss_pred HHHHHCCCEEEEEcCCCHHHhhcC
Confidence 999999999999999999999863
No 13
>PRK13788 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=7.2e-155 Score=1180.85 Aligned_cols=395 Identities=45% Similarity=0.813 Sum_probs=381.9
Q ss_pred CcEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHH
Q 045536 14 SQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGL 93 (438)
Q Consensus 14 ~~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l 93 (438)
|+.++|||+|||||||||||||||+++|+|||||||+||||||+ ++|++|+|||||||+|+|+++|+||||||+||+.|
T Consensus 1 m~~~vVvG~QwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~viG~GvVidp~~L 79 (404)
T PRK13788 1 MPGIAIIGAQWGDEGKGKVVDALAPEADFVVRYQGGANAGHTVV-AKGKTFKLNLLPSGVLHPHATSVLGDGMVIDPFRF 79 (404)
T ss_pred CCcEEEEeCCcCCCCCchhhhhhcccCCEEEEeCCcCCcCcEEE-ECCEEEEEeccCceecCCCceEEECCcEEEcHHHH
Confidence 55789999999999999999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHH
Q 045536 94 FNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQ 173 (438)
Q Consensus 94 ~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~ 173 (438)
++||++|+++|++ +||+||+||||+||||+++|+. .++||||||||||||+||++|.|||++||+|++.|++
T Consensus 80 ~~Ei~~L~~~Gv~--~rl~Is~rahli~p~H~~~D~~------~~~IGTT~rGIGpay~dk~~R~gir~~Dl~~~~~l~~ 151 (404)
T PRK13788 80 AEERENLRAGGLN--PKLLISERAHLVLPHHKYVDGR------KNFVGTTGRGIGPAYSDRARRVGIRFGDLLDEAVLRE 151 (404)
T ss_pred HHHHHHHHhCCCC--CCEEEeCCcCcCChHHHHHhCc------ccCCCCCCCcchHhhhhhcccccceeehhcCHHHHHH
Confidence 9999999999987 6999999999999999999962 4589999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcccC
Q 045536 174 KLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVTS 253 (438)
Q Consensus 174 kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~VTS 253 (438)
||+.++++++.++..+... ++++++++|.+++++|+|||+|+..+|++++++||+||||||||+|||+||||||||||
T Consensus 152 kl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~v~D~~~~l~~al~~gk~iLfEGAQG~lLDid~GtYP~VTS 229 (404)
T PRK13788 152 RVERLLEAKPNSTREAGWD--TVEKALADLAPMREILLPFIADTGSLLREAIREGKRVLFEGAQATLLDLNYGTYPYVTS 229 (404)
T ss_pred HHHHHHHHHHHHHhhccCC--CHHHHHHHHHHHHHHhhcccccHHHHHHHHHHCCCeEEEEccchhhhccccCcCCCcCC
Confidence 9999999999888775332 58899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccC----CCCCCCCCCcccccchHHHHH
Q 045536 254 SSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQ----EFGTTTGRPRRCGWLDIVALK 329 (438)
Q Consensus 254 S~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~----E~G~tTGR~RR~GwlDlv~lr 329 (438)
|||+++++|+|+|++|+.|++||||+|||+||||+||||||++++.+++||+.|+ |||+||||||||||||+|++|
T Consensus 230 Snt~~~g~~~g~Gi~p~~i~~ViGV~KAY~TRVG~GPFPTEl~~e~g~~lr~~G~~~~~E~GttTGRpRR~GwlD~v~lr 309 (404)
T PRK13788 230 SHPTVGGILVGAGVNHKAINKVYGVAKAFTTRVGHGPFPTEVFGEMAIRLRGKGGNPWDEFGTTTGRARRVGWLDLVLLK 309 (404)
T ss_pred CCchHHHHHhccCCCccccceEEEEEEeccccccCCCCCCcCccHHHHHHHhcCCCCceeecccCCCCceeecchHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHH
Q 045536 330 YCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAAR 409 (438)
Q Consensus 330 ya~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~ 409 (438)
||+++||+|+|||||||||+++++||||++|++ +| +|+|++|||| ++++++++|++||++||
T Consensus 310 ya~~ing~~~lalTkLDvL~~~~~ikic~~Y~~-~g----------------~pvye~~~GW-~~~~~~~~~~~LP~~a~ 371 (404)
T PRK13788 310 YACEVNGFDGLVLTKLDVLSGLEKVKVCVEYDD-DG----------------QPVYKELPGW-GDLDGVKSREALPKEAQ 371 (404)
T ss_pred HHHHhcCCCeEEEecchhcCCCCceeEEEEEec-CC----------------eEEEEeCCCc-cccccccChhhcCHHHH
Confidence 999999999999999999999999999999998 76 6999999999 79999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEeeCCCcccccc
Q 045536 410 QFVERIEELVGVPINYIGVGPGRDALIF 437 (438)
Q Consensus 410 ~yi~~iE~~~gvpi~~is~Gp~r~~~i~ 437 (438)
+||++||+++|+||+|||+||+|+|||-
T Consensus 372 ~yi~~iE~~~g~pv~~is~Gp~R~~~i~ 399 (404)
T PRK13788 372 AYLELIEETTGVPVVMFSTSPRREDTYG 399 (404)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHhhc
Confidence 9999999999999999999999999983
No 14
>cd03108 AdSS Adenylosuccinate synthetase (AdSS) catalyzes the first step in the de novo biosynthesis of AMP. IMP and L-aspartate are conjugated in a two-step reaction accompanied by the hydrolysis of GTP to GDP in the presence of Mg2+. In the first step, the r-phosphate group of GTP is transferred to the 6-oxygen atom of IMP. An aspartate then displaces this 6-phosphate group to form the product adenylosuccinate. Because of its critical role in purine biosynthesis, AdSS is a target of antibiotics, herbicides and antitumor drugs.
Probab=100.00 E-value=1.4e-151 Score=1142.34 Aligned_cols=363 Identities=64% Similarity=1.089 Sum_probs=357.8
Q ss_pred EEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHHHH
Q 045536 16 VSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFN 95 (438)
Q Consensus 16 ~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l~~ 95 (438)
+++|||+|||||||||||||||+++|+|||||||+||||||+ ++|+||+|||||||+|+|+++|+|||||||||+.|++
T Consensus 1 ~~vVvG~qwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTvv-~~g~k~~lhliPSGil~~~~~~viG~GvVidp~~l~~ 79 (363)
T cd03108 1 VTVVVGAQWGDEGKGKIVDLLAERADIVVRFQGGNNAGHTVV-VNGKKFKLHLLPSGILNPGVTCVIGNGVVIDPPALFE 79 (363)
T ss_pred CEEEEecccCCCCCceeeeeccccCCEEEEcCCcCCCCcEEE-ECCEEEEEEecCccccCCCceEEECCeEEEcHHHHHH
Confidence 368999999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHHHH
Q 045536 96 EIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKL 175 (438)
Q Consensus 96 Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~kL 175 (438)
||++|+++|+++.+||+||+||||+||||+++|+++|..|+.++||||||||||||+||++|.|||++||
T Consensus 80 Ei~~L~~~g~~~~~rL~Is~ra~li~P~H~~lD~~~E~~rg~~~iGTT~rGIGpay~dk~~R~gir~~Dl---------- 149 (363)
T cd03108 80 EIDELEKKGGDVTGRLFISDRAHLVFPYHILLDGLREEARGKKKIGTTKRGIGPAYEDKAARRGIRVGDL---------- 149 (363)
T ss_pred HHHHHHHcCCCCCCCEEEcCCCCCCChHHHHHhhhhHhhcCCCCcCCCCCcchHHHHHhhhccCCeEEeC----------
Confidence 9999999999887899999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcccCCC
Q 045536 176 DFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVTSSS 255 (438)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~VTSS~ 255 (438)
|+..+|++|+++||+||||||||+|||+||||||||||||
T Consensus 150 ----------------------------------------d~~~~l~~a~~~gk~vLfEGAQG~lLDid~GtYPyVTSSn 189 (363)
T cd03108 150 ----------------------------------------DTSYLINEAIQAGKKVLFEGAQGTLLDIDFGTYPFVTSSN 189 (363)
T ss_pred ----------------------------------------cHHHHHHHHHHcCCcEEEEccchhhhccccCcCCCcCCCC
Confidence 7889999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHHHHhc
Q 045536 256 PSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQIN 335 (438)
Q Consensus 256 t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya~~in 335 (438)
|+++++|+|+|++|+.|++||||+|||+||||+||||||++++.+++||+.|+|||+||||||||||||++++|||+++|
T Consensus 190 t~a~g~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFpTEl~~e~g~~lr~~G~E~GttTGRpRR~Gw~D~v~lrya~~in 269 (363)
T cd03108 190 TTAGGACTGLGIPPRKIGRVIGVVKAYTTRVGSGPFPTELFDETGDKLREAGHEFGTTTGRPRRCGWLDLVALKYAVRIN 269 (363)
T ss_pred chhhhhhhccCCCccccceEEEEEeeccccccCCCCCccCchHHHHHHhhcCCcccccCCCCcccccchHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHHHHHH
Q 045536 336 GFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERI 415 (438)
Q Consensus 336 g~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~i 415 (438)
|+|+|||||||||+++++||||++|++ +|+.++.||++++.|++|+|||++||||+++++++|+|++||++|++||++|
T Consensus 270 g~t~lalTkLDvL~~~~~ikvc~~Y~~-~g~~~~~~p~~~~~l~~~~Pvye~~~GW~~~~~~~~~~~~LP~~a~~yi~~i 348 (363)
T cd03108 270 GVTELALTKLDVLDGLDEIKVCVAYEL-DGKEIDYFPADLEDLEKVEPVYETLPGWKEDISGVRSYDDLPENAQNYIKRI 348 (363)
T ss_pred CCCeEEEeceeecCCCCeEEEEEeEEe-CCEEEeeCCCChhHHhccEEEEEECCCCccccccccchhhcCHHHHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEEEeeCC
Q 045536 416 EELVGVPINYIGVGP 430 (438)
Q Consensus 416 E~~~gvpi~~is~Gp 430 (438)
|+++|+||.|||+||
T Consensus 349 E~~~g~pv~~is~Gp 363 (363)
T cd03108 349 EELVGVPISIISVGP 363 (363)
T ss_pred HHHHCCCEEEEEeCc
Confidence 999999999999998
No 15
>KOG1355 consensus Adenylosuccinate synthase [Nucleotide transport and metabolism]
Probab=100.00 E-value=9.6e-152 Score=1117.17 Aligned_cols=423 Identities=57% Similarity=1.021 Sum_probs=413.9
Q ss_pred cccCcEEEEEcCCCccCCchhhhhhhcc--CCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEe
Q 045536 11 ELLSQVSGVLGCQWGDEGKGKLVDILAE--HFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVV 88 (438)
Q Consensus 11 ~~~~~~~~VvG~qwGDEGKGkivD~La~--~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi 88 (438)
..++++.+|+|+|||||||||+||+||+ ++|+|+|+|||+||||||| +||++|.||++||||++|+|.++|||||||
T Consensus 26 ~~~~~v~vvLG~QWgDeGKGk~vdll~~~~~~di~arcqGGnNAGHTvv-~~g~~ydfHllPSGiinp~~~~~iGNGVVi 104 (455)
T KOG1355|consen 26 PSGNQVTVVLGAQWGDEGKGKVVDLLAQDAKVDIVARCQGGNNAGHTVV-VDGVEYDFHLLPSGIINPNCTNFIGNGVVI 104 (455)
T ss_pred cCCCceEEEEeeeeccCCCceeEEeecccCCCceeeeccCCCCCCcEEE-EcceEEeeeeccccccCCCceEEecceeEE
Confidence 5667899999999999999999999999 6799999999999999999 999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCc---ccccCCccchhhcccccCCCCeEEeC
Q 045536 89 HLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSF---IGTTRRGIGPAYSSKVIRSGIRVSDL 165 (438)
Q Consensus 89 ~p~~l~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~---iGTTg~GIGpay~dk~~R~gir~~DL 165 (438)
|++.||+|++.|+++|+.+.+||+||||||++|+||++.|.++|.+++.+. ||||++||||+|+.|++|.||||+||
T Consensus 105 hlp~lF~E~e~le~kGl~~~~Rl~iSdrAHLvFdfHq~vDglqE~el~~~~gkniGTTkkGIGP~YSsKa~RsGiRv~dL 184 (455)
T KOG1355|consen 105 HLPGLFEELEKLEAKGLKWEKRLIISDRAHLVFDFHQAVDGLQEQELQEQSGKNIGTTKKGIGPAYSSKAARSGLRVCDL 184 (455)
T ss_pred echhHHHHHHhhhhccccccceeEeccchhheeehhhhcchhhHHHHHhhhcccccccCCCcCcccchhhhhcCcchhHH
Confidence 999999999999999999999999999999999999999999999997655 99999999999999999999999999
Q ss_pred C-CCCcHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccC
Q 045536 166 R-HMDTFPQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDID 244 (438)
Q Consensus 166 ~-~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid 244 (438)
. |++.|.+|++.+++.+..++..++++ +++++++|+.++++|+|||.|++.+|++|++.+|+||+||||++|||+|
T Consensus 185 ~~D~~~fs~r~k~l~~~~~~~fp~~e~d---ie~el~~~K~~aekl~p~V~D~V~F~~eal~~~KkiLVEGanaamLDiD 261 (455)
T KOG1355|consen 185 VSDFDEFSERFKVLAEQYKSRFPTLEID---IEGELARYKGYAEKLKPMVRDTVYFMYEALHGKKKILVEGANAAMLDID 261 (455)
T ss_pred HhHHHHHHHHHHHHHHHHHHhcCCeEec---HHHHHHHHHHHHHhhcchhhchhhhhhhhhhcCceEEEecccceeeecc
Confidence 8 59999999999999999999988776 9999999999999999999999999999999999999999999999999
Q ss_pred CCcCCcccCCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccch
Q 045536 245 FGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLD 324 (438)
Q Consensus 245 ~GtYP~VTSS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlD 324 (438)
|||||||||||||.+|+|+|+|+||+.|.++|||+|||+||||.||||||..++.|+.||..|.|||.||||+|||||||
T Consensus 262 FGTYPfVTSSn~tvGGvcTGlGipPq~ig~viGVVKAYtTRVG~GpFPTEqlneiGelLqt~G~E~GvTTgRkRRCGWLD 341 (455)
T KOG1355|consen 262 FGTYPFVTSSNCTVGGVCTGLGIPPQNIGEVIGVVKAYTTRVGIGPFPTEQLNEIGELLQTRGREFGVTTGRKRRCGWLD 341 (455)
T ss_pred cCcccccccCCCcccceeccCCCCcccccceeeeEeeeeeecccCCCchhhccchhHHHHhccceeeeecCCccccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCc
Q 045536 325 IVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDL 404 (438)
Q Consensus 325 lv~lrya~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~L 404 (438)
+++||||++|||+|+|+|||||+||.|+||||+++|++ +|+.+++||++++.|.+++..|+++|||+++++++|+|+||
T Consensus 342 lv~Lkys~mING~tal~lTKLDiLd~~~eIkvgVaYk~-~G~~i~~fPa~~~~l~~~eveY~~lpGW~~~~~~vr~~~dl 420 (455)
T KOG1355|consen 342 LVLLKYSHMINGFTALALTKLDILDTFPEIKVGVAYKL-NGKIIPHFPANQEVLGKVEVEYKTLPGWKTDTTGVRNFKDL 420 (455)
T ss_pred HHHHHHHHhhcchhheeeehhhhhhhccceeEEEEEee-CCcCCCCCcccHHHHhheeEEEEecCCCCccchhhhhHhhh
Confidence 99999999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCCeEEEeeCCCccccccC
Q 045536 405 PKAARQFVERIEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 405 P~~a~~yi~~iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
|++||+|+++||+++||||.||++||.||.||.+
T Consensus 421 P~~aq~Yv~fiE~~v~vpv~~iGvG~~Resmi~~ 454 (455)
T KOG1355|consen 421 PENAQQYVRFIEDFVGVPVKWIGVGKGRESMIQL 454 (455)
T ss_pred hHHHHHHHHHHHHhhCCceEEEEecCChHHhhcc
Confidence 9999999999999999999999999999999864
No 16
>PTZ00351 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=4.9e-149 Score=1159.99 Aligned_cols=424 Identities=28% Similarity=0.443 Sum_probs=403.2
Q ss_pred CCcccccccCcEEEEEcCCCccCCchhhhhhhccC--CcEEEEcCCCCCCCcEEEEc-CCeEEEEeecCceeecCCceeE
Q 045536 5 ESPNRIELLSQVSGVLGCQWGDEGKGKLVDILAEH--FDIVARCQGGANAGHTIYNA-EGKKFALHLVPSGILNEDTVCV 81 (438)
Q Consensus 5 ~~~~~~~~~~~~~~VvG~qwGDEGKGkivD~La~~--~d~VVRf~GG~NAGHTVv~~-~g~~~~~hllPSGil~~~~~~~ 81 (438)
.||||+...+++++|||+|||||||||||||||++ +|+|||||||+||||||+ . +|++|+|||||||+|++++.|+
T Consensus 160 ~~~~~~~~~~~viVVVGaQWGDEGKGKIVD~LA~~~~aDvVVRfqGG~NAGHTVV-~~~Gkky~LHLIPSGIL~p~~~~v 238 (710)
T PTZ00351 160 DSLYRIVEAHDVIMVAGAFFGDEGKGKTVDAVAHHPLCTCIARVNSGENAGHTVY-DKAGRKFVFNLAPSGLLLPGKRNY 238 (710)
T ss_pred hhhhHHHhhcCcEEEEcCCccCCCCchhhhhhccCCCCCEEEEcCCcCCCCceEE-ecCCeEEEEeccCceecCCCceEE
Confidence 58999999999999999999999999999999998 799999999999999999 6 8999999999999999999999
Q ss_pred ecCCeEechHHHH-HHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCC
Q 045536 82 IGNGVVVHLPGLF-NEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGI 160 (438)
Q Consensus 82 ig~GvVi~p~~l~-~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gi 160 (438)
||+||||||++|+ +||++|++.|+++.+||+||+|| ||||||+++|.++| .+||||+|||||||+||++|+||
T Consensus 239 IGnGVVIdP~~L~e~EI~~L~~~Gi~~~~RL~ISdrA-lI~PyH~~lD~l~E-----~~iGTT~rGIGPaY~DKv~R~GI 312 (710)
T PTZ00351 239 IGPECVMDPVSFMEKEIIQLIDAGIDYRDRLFIGNVC-IVTPYHKLLDLLGS-----AANSSTLKGMAPVHGSKVMKRGI 312 (710)
T ss_pred ECCCEEEcHHHHHHHHHHHHHHcCCCCCCCEEEcccc-ccChhHHHHHhhhh-----hccCCCCCccChhhhchhhhccc
Confidence 9999999999998 79999999999877899999999 99999999999988 47999999999999999999999
Q ss_pred eEEeCCCC-CcHHHHHHHHHHHHHhhcc-------CC---CCCC------------CCH---HHHHHHHH-HHHHhhC--
Q 045536 161 RVSDLRHM-DTFPQKLDFLLSNAAARFP-------GF---KYTP------------HML---REEVEKYK-RIAERLE-- 211 (438)
Q Consensus 161 r~~DL~~~-~~l~~kL~~~~~~~~~~~~-------~~---~~~~------------~~~---~~~~~~~~-~~~~~l~-- 211 (438)
|++||+|+ +.|++||+.+++.++.+++ .+ ..++ .++ +++++++. .++++|+
T Consensus 313 Rl~DL~~~~~~lr~rL~~~l~~~n~~l~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~e~~~e~l~~~y~~rl~~~ 392 (710)
T PTZ00351 313 RLDHIFNDDETLRKRLEKDMDTYLGLLKVKNLSDADVVRLCREENSDGVVRVPDYVIAFAQAKDKVEFLVKLYRDRVRHN 392 (710)
T ss_pred CHHHhcCCHHHHHHHHHHHHHHHHHHhhcccccccchhhhccccccccccccccccccchhHHHHHHHHHHHHHHHHhcc
Confidence 99999997 9999999999999998887 22 1111 222 66788888 9999999
Q ss_pred ---CcccChHHHHHHHHHCCCcEEEEeccccccccCCCc-CCcccCCCCcccccccccCCCCcccCc-EEEEEeec-ccc
Q 045536 212 ---PFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGT-YPFVTSSSPSAGGICTGLGIAPRVVGD-LIGVVKAY-TTR 285 (438)
Q Consensus 212 ---~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~Gt-YP~VTSS~t~a~~~~~g~G~~~~~i~~-viGV~KAY-~TR 285 (438)
||++|+..+|++|+++||+||||||||+|||+|||| |||||||||+++|+|+|+|++|+.|++ ||||+||| +||
T Consensus 393 ~~~p~v~Dt~~~L~~A~~~GkkVLfEGAQg~lLDiD~GT~YPfVTSSnttAgGa~~G~Gi~p~~i~~~ViGV~KAY~sTR 472 (710)
T PTZ00351 393 PDFPARCDVTYELHAAVLRGEKVLLEGPQSYWLSNARTKFWESTTSADTTAAGLLAASQLNFQKFKSVVLNVHKAPGSSR 472 (710)
T ss_pred CCCCeEEeHHHHHHHHHHCCCeEEEEcchhhhhhhhcCCCCCCcCccchHHHHHHhhcCCCcccCCceEEEEEeCCCCCc
Confidence 999999999999999999999999999999999997 999999999999999999999999999 99999999 999
Q ss_pred ccCCCCCC-------------------------------------------------------ccCCcccchh-------
Q 045536 286 VGSGPFPT-------------------------------------------------------EILGQGGDHL------- 303 (438)
Q Consensus 286 VG~GPfPT-------------------------------------------------------E~~~~~g~~l------- 303 (438)
||+||||| |+++++|++|
T Consensus 473 VG~GPFPT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~El~de~G~~l~~~~~~~ 552 (710)
T PTZ00351 473 VGIGACPSSFVPQDYFSAQNIKTLRDLPSATCANFEAVQRTLFRDGFPHSNDKARHNGIMAPVEYSDETGDYNIGVAMAI 552 (710)
T ss_pred CcCCCCCCcccccccccccccccccccccccccccchhcccccccccccccccccccccCCccccccchhhHhhhccccc
Confidence 99999999 8889999999
Q ss_pred --hhccCCCCCCCCCCcccccchHHHHHHHHHhcCcceeeeecccccCCCCCceEEEeeeec--CCcccc----------
Q 045536 304 --RLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRV--DGTPIK---------- 369 (438)
Q Consensus 304 --r~~g~E~G~tTGR~RR~GwlDlv~lrya~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~--~G~~~~---------- 369 (438)
|+.|+|||+||||||||||||+|++||++++||+ .|+||||||||++++||||++|++. +|+.++
T Consensus 553 ~~r~~G~E~GatTGRPRRCGWfD~Vllrya~~inG~-~LalTKLDVLd~ldeIkVcvaY~~~~~~gk~~~~~~~~~~~~~ 631 (710)
T PTZ00351 553 ASAQHHGECGAVTKKPRVCGFFDCVLQHEVNSIQGP-YLTISALDRGDEYDKVGVTIAYVYYNPEGKQVDVNGHVYKNGD 631 (710)
T ss_pred hhhhcCccccCCCCCCccccchHHHHHHHHHhcCCc-eEEEeeeeccCCCCeeeEEEEEEeeCCCCeEeccccccccccc
Confidence 9999999999999999999999999999999999 9999999999999999999999974 799887
Q ss_pred ------cCCCChhhhccCeEeEEEcCCCccc-cccc--cCCCCccHHHHHHHHHHHHHhCCCeEEEeeCCCcccccc
Q 045536 370 ------SFPADLVLLEQLKVEYEVLPGWQSD-ISSI--RNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIF 437 (438)
Q Consensus 370 ------~~P~~~~~l~~~~pvY~~~~GW~~~-~~~~--~~~~~LP~~a~~yi~~iE~~~gvpi~~is~Gp~r~~~i~ 437 (438)
.|| +...|++|+|||++||||+++ |+++ |+|++||++|++||++||+++|+||.|||+||+|+|||.
T Consensus 632 ~~~~~~~~P-~~~~L~~~~PIYe~~~GWk~~~is~~k~r~~~~LP~~a~~Yi~~IE~~~gvpI~~IsvGP~R~q~I~ 707 (710)
T PTZ00351 632 IIRAGDPVP-SEPALYHCHPIVKLIDGWRDNPIAAAKRRRNAPLPRGVCELLSTIEYFTNCKILSIGNGPNGDDIIY 707 (710)
T ss_pred cccccCCCC-ChHHhccceEEEEECCCCCCCcccccccCChHHhhHHHHHHHHHHHHHHCCCEEEEecCCChhHeeE
Confidence 899 689999999999999999999 9988 999999999999999999999999999999999999986
No 17
>PRK04293 adenylosuccinate synthetase; Provisional
Probab=100.00 E-value=6.4e-135 Score=1009.32 Aligned_cols=330 Identities=40% Similarity=0.661 Sum_probs=313.2
Q ss_pred CcEEEEEcCCCccCCchhhhhhhcc--CCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechH
Q 045536 14 SQVSGVLGCQWGDEGKGKLVDILAE--HFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLP 91 (438)
Q Consensus 14 ~~~~~VvG~qwGDEGKGkivD~La~--~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~ 91 (438)
|+.++|||+|||||||||||||||+ ++|+|||||||+||||||+ .+|+||+|||||||+|+|++.|+||+|||+||+
T Consensus 1 m~~~vVvG~qwGDEGKGkivD~La~~~~~d~VvR~~GG~NAGHTvv-~~g~k~~lhliPSGil~~~~~~~iG~GvVv~p~ 79 (333)
T PRK04293 1 MTCTIVVGGFFGDEGKGKIIAYLALKDKPSIIARGGVGPNAGHTVE-YNGKKYGLRMIPSGFVNKDAKLAIGAGVLVDPE 79 (333)
T ss_pred CCcEEEEecccCCCCCceeehhhcccCCCCEEEEcCCCCCCCcEEE-ECCEEEEEEecCccccCCCccEEECCcEEECHH
Confidence 5678999999999999999999998 8999999999999999999 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcH
Q 045536 92 GLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTF 171 (438)
Q Consensus 92 ~l~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l 171 (438)
.|++||++| |+ .+||+||+||||++|||+++|+++|. ++ ++||||||||||||+||++|+|||+.|.
T Consensus 80 ~L~~Ei~~L---~~--~~rL~Is~ra~li~p~H~~~D~~~E~-~~-~~IGTT~rGIGpaY~dk~~R~gir~~~~------ 146 (333)
T PRK04293 80 VLLKEVEEL---NV--GGRVFVDYRCGIIEEKHVEEDRSDEH-LS-KKIGSTGTGCGPANADRVLRRLKLAKDV------ 146 (333)
T ss_pred HHHHHHHHh---CC--CCCEEEcCCCccCCHHHHHHhHHhHH-hC-CCCCCCCCcccHhhHHHHhhhhhhccch------
Confidence 999999999 43 47999999999999999999999998 44 8999999999999999999999998431
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcc
Q 045536 172 PQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFV 251 (438)
Q Consensus 172 ~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~V 251 (438)
++|+||++|+..+|++++++||+||||||||+|||+||||||||
T Consensus 147 ------------------------------------~~l~~~v~d~~~~l~~al~~gk~vLfEGAQG~lLDid~GtYP~V 190 (333)
T PRK04293 147 ------------------------------------EELEKYLTDVPEEVNEALDRGENVLIEGTQGFGLSLYYGTYPYV 190 (333)
T ss_pred ------------------------------------hhhccceecHHHHHHHHHHCCCeEEEEeccceeeccccCcCCCc
Confidence 47889999999999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHH
Q 045536 252 TSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYC 331 (438)
Q Consensus 252 TSS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya 331 (438)
|||||+++++|+|+|++|+.|++||||+|||+||||+||||||++++.++.++. +|||+||||||||||||++++|||
T Consensus 191 TSSnt~a~g~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFpTEl~~e~g~~~g~--~E~GttTGRpRR~GwlD~v~lrya 268 (333)
T PRK04293 191 TSKDTTASGIASDVGVGPTKVDEVIVVFKSYPTRVGEGPFPTELSLEEAEKLGL--VEYGTVTGRRRRVGPFDFELARRA 268 (333)
T ss_pred cCCCchhhhhhhccCCCCcccceEEEEEeeecccccCCCCCccCCchhhhhcCC--ccccccCCCCcccccchHHHHHHH
Confidence 999999999999999999999999999999999999999999999998885542 599999999999999999999999
Q ss_pred HHhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHH
Q 045536 332 CQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQF 411 (438)
Q Consensus 332 ~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~y 411 (438)
+++||+|.|+|||||||+. +++++++|++||++|++|
T Consensus 269 ~~ing~~~lalTklDvL~~-------------------------------------------~~~~~~~~~~LP~~a~~y 305 (333)
T PRK04293 269 ARINGATQIAITKLDKLDK-------------------------------------------EAYGVTEYDKLPPEAKKF 305 (333)
T ss_pred HHhcCCCeEEEEcceecCC-------------------------------------------ccccCCchHHcCHHHHHH
Confidence 9999999999999999971 457899999999999999
Q ss_pred HHHHHHHhCCCeEEEeeCCCccccccC
Q 045536 412 VERIEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 412 i~~iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
|++||+++|+||.|||+||+|+|||.+
T Consensus 306 i~~iE~~~~~pv~~is~Gp~r~~~i~~ 332 (333)
T PRK04293 306 IEEIEEELGVPVTLISTGPELEDTIDL 332 (333)
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHeEec
Confidence 999999999999999999999999864
No 18
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=58.65 E-value=8.6 Score=39.96 Aligned_cols=62 Identities=32% Similarity=0.365 Sum_probs=39.1
Q ss_pred HHHHHH---HhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCC
Q 045536 327 ALKYCC---QINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSD 403 (438)
Q Consensus 327 ~lrya~---~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~ 403 (438)
++..|- ..-++|++.|||||. +.-.-+-+.++|++ =.||| |=|+-+. ++|
T Consensus 273 al~QAk~F~eav~l~GiIlTKlDg-tAKGG~il~I~~~l------------------~~PI~--fiGvGE~------~~D 325 (340)
T COG0552 273 ALSQAKIFNEAVGLDGIILTKLDG-TAKGGIILSIAYEL------------------GIPIK--FIGVGEG------YDD 325 (340)
T ss_pred HHHHHHHHHHhcCCceEEEEeccc-CCCcceeeeHHHHh------------------CCCEE--EEeCCCC------hhh
Confidence 555555 445799999999994 33334444444543 13554 5677765 445
Q ss_pred c-cHHHHHHHHHH
Q 045536 404 L-PKAARQFVERI 415 (438)
Q Consensus 404 L-P~~a~~yi~~i 415 (438)
| |.+++.|++.|
T Consensus 326 L~~Fd~~~fv~~L 338 (340)
T COG0552 326 LRPFDAEWFVDAL 338 (340)
T ss_pred ccccCHHHHHHHh
Confidence 5 67788888765
No 19
>PF13316 DUF4087: Protein of unknown function (DUF4087)
Probab=55.51 E-value=3.4 Score=35.77 Aligned_cols=10 Identities=50% Similarity=1.315 Sum_probs=8.3
Q ss_pred cccccchHHH
Q 045536 318 RRCGWLDIVA 327 (438)
Q Consensus 318 RR~GwlDlv~ 327 (438)
+||||||-+.
T Consensus 7 ~RCGW~~NPt 16 (101)
T PF13316_consen 7 TRCGWFDNPT 16 (101)
T ss_pred cccCcccCCC
Confidence 7999999663
No 20
>PF11181 YflT: Heat induced stress protein YflT
Probab=45.58 E-value=1.8e+02 Score=24.61 Aligned_cols=60 Identities=18% Similarity=0.243 Sum_probs=36.1
Q ss_pred CeEechHHHHHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhc
Q 045536 85 GVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYS 152 (438)
Q Consensus 85 GvVi~p~~l~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~ 152 (438)
|++=+...++..|++|+.+|+.. +.|+| +.--....+.+.+.. ..+.+|++-.|+.-...
T Consensus 4 gv~~~~~E~~~~I~~L~~~Gy~~-ddI~V------va~d~~~~~~l~~~t-~~~~~~~~~~~~~d~~~ 63 (103)
T PF11181_consen 4 GVYDNEEEALSAIEELKAQGYSE-DDIYV------VAKDKDRTERLADQT-DTNTVGASEESFWDKIK 63 (103)
T ss_pred EEECCHHHHHHHHHHHHHcCCCc-ccEEE------EEcCchHHHHHHHhc-CCceeccccccHHHHHH
Confidence 46667889999999999999975 34443 221112234454433 33456776666664443
No 21
>PRK05414 urocanate hydratase; Provisional
Probab=44.54 E-value=1.9e+02 Score=31.98 Aligned_cols=162 Identities=14% Similarity=0.149 Sum_probs=96.0
Q ss_pred eeEecCCeEechHHHHHHHHHHHHCCCCC------CCCeEEcCCccccchhhHHhhHHHHHHhcCC----cccccCC-cc
Q 045536 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSC------KGRILVSDRAHLLFDFHQEVDGLREAELVKS----FIGTTRR-GI 147 (438)
Q Consensus 79 ~~~ig~GvVi~p~~l~~Ei~~L~~~g~~~------~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~----~iGTTg~-GI 147 (438)
+.+|.|+++|---+=.++..+|+++|+.- -+=+||-.+--|-=-|--.++..+ +..+.. -+=|.|. |+
T Consensus 100 RVliaN~~lVp~wa~~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~a~r-k~f~g~L~G~~~lTaGLGGM 178 (556)
T PRK05414 100 RVLIANSNLVPHWANWEHFNELEAKGLTMYGQMTAGSWIYIGSQGIVQGTYETFAEAAR-QHFGGDLAGRLVLTAGLGGM 178 (556)
T ss_pred eEEEEcCccccCCCCHHHHHHHHHcccccccCccccceeEEcCceeeecHHHHHHHHHH-HhcCCCCceeEEEEecCCcc
Confidence 47899999997777788999999998742 256889887644322332222221 111110 0112222 22
Q ss_pred chh--hcccccCCCCeEEeCCCCCcHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCC----cccChHHHH
Q 045536 148 GPA--YSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEP----FVVDTVHFI 221 (438)
Q Consensus 148 Gpa--y~dk~~R~gir~~DL~~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~i~d~~~~l 221 (438)
|=| -+-+++. ++-++-=.|++++++|+++= . +..-..++++.++...+..++=+| |+.+...++
T Consensus 179 gGAQPlA~~mag-~v~i~vEvd~~ri~kR~~~g------y---ld~~~~~Ldeal~~~~~a~~~~~~~SIg~~GNaadv~ 248 (556)
T PRK05414 179 GGAQPLAATMAG-AVCLAVEVDESRIDKRLRTG------Y---LDEKADDLDEALALAEEAKAAGEPLSIGLLGNAADVL 248 (556)
T ss_pred ccccHHHHHhcC-ceEEEEEECHHHHHHHHhCC------c---ceeEcCCHHHHHHHHHHHHHcCCceEEEEeccHHHHH
Confidence 322 2333332 33332223777777777651 1 112234578887777766666565 677888888
Q ss_pred HHHHHCCCcEEEEeccccccccCCCcCCcc
Q 045536 222 NESIAQKRKILVEGGQATMLDIDFGTYPFV 251 (438)
Q Consensus 222 ~~al~~gk~ilfEGaQG~lLDid~GtYP~V 251 (438)
.+.+++|-.+=+---|=..=|...|.||--
T Consensus 249 ~~l~~~~i~pDlvtDQTSaHdp~~GY~P~G 278 (556)
T PRK05414 249 PELVRRGIRPDLVTDQTSAHDPLNGYLPVG 278 (556)
T ss_pred HHHHHcCCCCCccCcCccccCcccccCCCC
Confidence 888888766666677777788888888853
No 22
>PF01175 Urocanase: Urocanase; InterPro: IPR023637 Urocanase [] (also known as imidazolonepropionate hydrolase or urocanate hydratase) is the enzyme that catalyzes the second step in the degradation of histidine, the hydration of urocanate into imidazolonepropionate. urocanate + H2O = 4,5-dihydro-4-oxo-5-imidazolepropanoate Urocanase is found in some bacteria (gene hutU), in the liver of many vertebrates and has also been found in the plant Trifolium repens (white clover). Urocanase is a protein of about 60 Kd, it binds tightly to NAD+ and uses it as an electrophil cofactor. A conserved cysteine has been found to be important for the catalytic mechanism and could be involved in the binding of the NAD+. This enzyme is a symmetric homodimer with tightly bound NAD+ cofactors. Each subunit consists of a typical NAD-binding domain inserted into a larger core domain that forms the dimer interface []. This entry represents the Urocanase subunit structural domain.; GO: 0016153 urocanate hydratase activity; PDB: 2V7G_A 1UWK_A 1UWL_B 1W1U_B 2FKN_C 1X87_B.
Probab=41.18 E-value=97 Score=34.16 Aligned_cols=161 Identities=15% Similarity=0.195 Sum_probs=79.1
Q ss_pred ceeEecCCeEechHHHHHHHHHHHHCCCCC------CCCeEEcCCccccchhhHHhhHHHHHHhcCCc----ccccCC-c
Q 045536 78 TVCVIGNGVVVHLPGLFNEIDDLEANGVSC------KGRILVSDRAHLLFDFHQEVDGLREAELVKSF----IGTTRR-G 146 (438)
Q Consensus 78 ~~~~ig~GvVi~p~~l~~Ei~~L~~~g~~~------~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~----iGTTg~-G 146 (438)
-+.+|.|+++|---+=.++.++|+++|+.- -+=+||-.+--|-=-|--.++.. .+..+.+- +=|.|. |
T Consensus 89 PRVliaN~~lVp~wa~~e~f~~l~~~GltmYGQMTAGsw~YIG~QGIvqGTyeT~~~aa-rk~~g~~L~Gk~~lTaGLGG 167 (546)
T PF01175_consen 89 PRVLIANSNLVPNWATWEHFERLEALGLTMYGQMTAGSWIYIGPQGIVQGTYETFLNAA-RKHFGGDLAGKLFLTAGLGG 167 (546)
T ss_dssp -SEEEEESEB-GGGGSHHHHHHHHHTT---B-TTTTTTT---TTHHHHHHHHHHHHHHH-HHHSTTS-TT-EEEEE--ST
T ss_pred CeEEEEcCcccCCCCCHHHHHHHHhccchhhccccccceEEEcccceeehhhHHHHHHH-HHhcCCCCcceEEEEecccc
Confidence 347899999998778889999999998742 25678887643321122222221 11112111 112222 2
Q ss_pred cch--hhcccccCCCCeE-EeCCCCCcHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCC----cccChHH
Q 045536 147 IGP--AYSSKVIRSGIRV-SDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEP----FVVDTVH 219 (438)
Q Consensus 147 IGp--ay~dk~~R~gir~-~DL~~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~i~d~~~ 219 (438)
+|= .-+-+++- ++-+ .| .|++.+++|+++ .. +..-..++++.++..+++.++=+| |+.+...
T Consensus 168 MgGAQplA~~m~g-~v~l~vE-vd~~ri~kR~~~------g~---ld~~~~~ldea~~~~~ea~~~~~~~SIg~~GN~ad 236 (546)
T PF01175_consen 168 MGGAQPLAATMAG-GVGLIVE-VDPSRIEKRLEQ------GY---LDEVTDDLDEALARAKEARAKKEPLSIGLLGNAAD 236 (546)
T ss_dssp TCCHHHHHHHHTT--EEEEEE-S-HHHHHHHHHT------TS---SSEEESSHHHHHHHHHHHHHTT--EEEEEES-HHH
T ss_pred cccchHHHHHhcC-ceEEEEE-ECHHHHHHHHhC------CC---eeEEcCCHHHHHHHHHHhhccCCeeEEEEeccHHH
Confidence 232 23333332 3333 34 477777777764 11 122234588888888877777666 6788888
Q ss_pred HHHHHHHCCCcEEEEeccccccccCCCcCCc
Q 045536 220 FINESIAQKRKILVEGGQATMLDIDFGTYPF 250 (438)
Q Consensus 220 ~l~~al~~gk~ilfEGaQG~lLDid~GtYP~ 250 (438)
++.+.+++|-.+=+---|=..=|...|.||-
T Consensus 237 ~~~~l~~~~i~pDl~tDQTS~Hdp~~GY~P~ 267 (546)
T PF01175_consen 237 LWEELVERGIIPDLVTDQTSAHDPLNGYYPA 267 (546)
T ss_dssp HHHHHHHTT---SEE---SSTT-TTTS---T
T ss_pred HHHHHHHcCCCCCcccCCCccccccccCCCC
Confidence 8888888765555555666666766677773
No 23
>TIGR01228 hutU urocanate hydratase. This model represents the second of four enzymes involved in the degradation of histidine to glutamate.
Probab=39.91 E-value=2.7e+02 Score=30.82 Aligned_cols=161 Identities=16% Similarity=0.151 Sum_probs=94.4
Q ss_pred eeEecCCeEechHHHHHHHHHHHHCCCCC------CCCeEEcCCccccchhhHHhhHHHHHHhcCC----cccccCC-cc
Q 045536 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSC------KGRILVSDRAHLLFDFHQEVDGLREAELVKS----FIGTTRR-GI 147 (438)
Q Consensus 79 ~~~ig~GvVi~p~~l~~Ei~~L~~~g~~~------~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~----~iGTTg~-GI 147 (438)
+.+|.|+++|---+=.++..+|+++|+.- -+=+||-.+--|-=-|--.++.. .+..+.. -+=|.|. |+
T Consensus 91 RVliaNs~lVp~wa~~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~aa-rk~f~~~L~G~~~lTaGLGGM 169 (545)
T TIGR01228 91 RVLIANSNLVPHWADWEHFHELEAKGLMMYGQMTAGSWIYIGTQGILQGTYETFAELA-RQHFGGSLKGKWVLTAGLGGM 169 (545)
T ss_pred eEEEEcCccccCCCCHHHHHHHHHcccccccCccccceEEEcCcceeecHHHHHHHHH-HHhcCCCCceeEEEEeCCCcc
Confidence 47899999998777788899999998742 25688988764432232222221 1111110 0111222 22
Q ss_pred chh--hcccccCCCCeEEeCCCCCcHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCC----cccChHHHH
Q 045536 148 GPA--YSSKVIRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEP----FVVDTVHFI 221 (438)
Q Consensus 148 Gpa--y~dk~~R~gir~~DL~~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~i~d~~~~l 221 (438)
|=| -+-+++. ++-++-=.|++.+++||++=. +.....++++.++...++.++=+| ++.+...++
T Consensus 170 gGAQPlA~~mag-~v~i~vEvd~~ri~kR~~~gy---------ld~~~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~ 239 (545)
T TIGR01228 170 GGAQPLAVTMNG-GVSIAVEVDESRIDKRLETKY---------CDEQTDSLDEALARAEEAKAEGKPISIGLLGNAAEVL 239 (545)
T ss_pred ccccHHHHHHcC-ceEEEEEECHHHHHHHHhcCc---------ceeEcCCHHHHHHHHHHHHHcCCceEEEeeccHHHHH
Confidence 322 2223332 333222237777777776511 112234578887777766666565 577888888
Q ss_pred HHHHHCCCcEEEEeccccccccCCCcCCc
Q 045536 222 NESIAQKRKILVEGGQATMLDIDFGTYPF 250 (438)
Q Consensus 222 ~~al~~gk~ilfEGaQG~lLDid~GtYP~ 250 (438)
.+.+++|-.+=+---|=..=|...|.||-
T Consensus 240 ~~l~~r~i~pDlvtDQTSaHdp~~GY~P~ 268 (545)
T TIGR01228 240 PELLKRGVVPDVVTDQTSAHDPLNGYIPE 268 (545)
T ss_pred HHHHHcCCCCCCcCCCCcccCcccccCCC
Confidence 88888876666667777777888887774
No 24
>KOG0176 consensus 20S proteasome, regulatory subunit alpha type PSMA5/PUP2 [Posttranslational modification, protein turnover, chaperones]
Probab=34.80 E-value=55 Score=31.90 Aligned_cols=68 Identities=25% Similarity=0.330 Sum_probs=43.4
Q ss_pred EEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHHHHHH
Q 045536 19 VLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEI 97 (438)
Q Consensus 19 VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l~~Ei 97 (438)
=+-+||||++-.+. .+++.+-+-.=|.| | .+..---||+=|||.|..-..--||+|.-.--..|.+|.
T Consensus 118 ~LaLrFGe~~~~~~--~msRPFGValliAG-----~----D~~gpqL~h~dPSGtf~~~~AKAIGSgsEga~~~L~~e~ 185 (241)
T KOG0176|consen 118 DLALRFGEGDDEEA--IMSRPFGVALLIAG-----H----DETGPQLYHLDPSGTFIRYKAKAIGSGSEGAESSLQEEY 185 (241)
T ss_pred HHHhHhCCCcchhh--hhcCCcceEEEEee-----c----cCCCceEEEeCCCCceEEecceeccccchHHHHHHHHHH
Confidence 35689999973333 46888888777754 3 122334579999999965333459999754444444443
No 25
>PF06279 DUF1033: Protein of unknown function (DUF1033); InterPro: IPR010434 This family consists of several hypothetical bacterial proteins. Many of the sequences in this family are annotated as putative DNA binding proteins but the function of this family is unknown.
Probab=30.75 E-value=35 Score=30.49 Aligned_cols=33 Identities=15% Similarity=0.436 Sum_probs=28.0
Q ss_pred EcCCCccccccccCCCCccHHHHHHHHHHHHHh
Q 045536 387 VLPGWQSDISSIRNYSDLPKAARQFVERIEELV 419 (438)
Q Consensus 387 ~~~GW~~~~~~~~~~~~LP~~a~~yi~~iE~~~ 419 (438)
-|.||.++|....+|+++.+..+.|-+.+.++-
T Consensus 16 ffedWeedIve~~~F~~~eeAl~~Y~~~~~~~~ 48 (120)
T PF06279_consen 16 FFEDWEEDIVEEKEFDNYEEALKYYKKLWQKLK 48 (120)
T ss_pred ccccchHhhhhhhhcCCHHHHHHHHHHHHHHHH
Confidence 488999999999999999888888877776654
No 26
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=29.08 E-value=40 Score=33.97 Aligned_cols=16 Identities=38% Similarity=0.457 Sum_probs=13.6
Q ss_pred ccccccCCCCCCccCC
Q 045536 282 YTTRVGSGPFPTEILG 297 (438)
Q Consensus 282 Y~TRVG~GPfPTE~~~ 297 (438)
|.|.|-.||-.||+++
T Consensus 180 ~V~~v~PG~~~T~f~~ 195 (265)
T COG0300 180 KVTAVCPGPTRTEFFD 195 (265)
T ss_pred EEEEEecCcccccccc
Confidence 6678889999999875
No 27
>PRK04220 2-phosphoglycerate kinase; Provisional
Probab=25.74 E-value=88 Score=32.13 Aligned_cols=90 Identities=16% Similarity=0.245 Sum_probs=49.9
Q ss_pred ccccCCccchhhcccc-cCCCCeEEeCCCCCcHHHHHHHHHHHH--Hhhc----cC---CCCCCCCHHH-HHHHHHHHHH
Q 045536 140 IGTTRRGIGPAYSSKV-IRSGIRVSDLRHMDTFPQKLDFLLSNA--AARF----PG---FKYTPHMLRE-EVEKYKRIAE 208 (438)
Q Consensus 140 iGTTg~GIGpay~dk~-~R~gir~~DL~~~~~l~~kL~~~~~~~--~~~~----~~---~~~~~~~~~~-~~~~~~~~~~ 208 (438)
-|++|.|=.. .+.+. .+.|+.. +...|.+++.++.....- +.+. .. +.-.|. -++ .+..|..-.+
T Consensus 98 ~G~sgsGKSt-lA~~La~~l~~~~--vi~~D~~re~~R~~~~~e~~p~L~~S~Y~a~~~l~~~~~-~~~~~l~g~~~~~~ 173 (301)
T PRK04220 98 GGASGVGTST-IAFELASRLGIRS--VIGTDSIREVMRKIISKELLPTLHESSYTAWKSLRRPPP-PEPPVIYGFERHVE 173 (301)
T ss_pred ECCCCCCHHH-HHHHHHHHhCCCE--EEechHHHHHHHHhcchhhccchhhhhhhhhhcccCCCC-CchhhhhhHHHHHH
Confidence 4677776654 44444 4556651 345678898888765211 1111 11 111111 222 3444444444
Q ss_pred hhCCcccChHHHHHHHHHCCCcEEEEec
Q 045536 209 RLEPFVVDTVHFINESIAQKRKILVEGG 236 (438)
Q Consensus 209 ~l~~~i~d~~~~l~~al~~gk~ilfEGa 236 (438)
.+.+. +...+.+++++|+++++||.
T Consensus 174 ~v~~g---i~~~I~~~~~~g~s~IiEGv 198 (301)
T PRK04220 174 PVSVG---VEAVIERALKEGISVIIEGV 198 (301)
T ss_pred HHHHH---HHHHHHHHHHhCCcEEEecC
Confidence 44433 56788899999999999996
No 28
>COG3040 Blc Bacterial lipocalin [Cell envelope biogenesis, outer membrane]
Probab=25.73 E-value=1.3e+02 Score=28.54 Aligned_cols=78 Identities=17% Similarity=0.162 Sum_probs=54.4
Q ss_pred CCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHHHHHHHHHHHCCCC
Q 045536 27 EGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDDLEANGVS 106 (438)
Q Consensus 27 EGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l~~Ei~~L~~~g~~ 106 (438)
|||+|++|. +.++-+=|+|-|=-|.+--|. .-...|...++.|.-- .-.=+++.-.-++.+.+-+=++.-++.|.+
T Consensus 87 eGkA~i~~~-~~~a~LkVsF~~pF~g~Y~Vl-~~d~eYs~aiVgsPdr--~ylWlLsRtP~~s~~~~~~ml~~ak~~Gfd 162 (174)
T COG3040 87 EGKAKIVDN-ATRAKLKVSFFGPFYGDYWVL-ALDPEYSWAIVGSPDR--EYLWLLSRTPTLSQETLKRMLEIAKRRGFD 162 (174)
T ss_pred cceEEEecC-ccccEEEEEecCCccccEEEE-EECCCccEEEEeCCCc--ceEEEEecCCCCCHHHHHHHHHHHHHcCCC
Confidence 799999998 457789999988566555555 4344476666655432 222457776668888887777777888988
Q ss_pred CC
Q 045536 107 CK 108 (438)
Q Consensus 107 ~~ 108 (438)
+.
T Consensus 163 v~ 164 (174)
T COG3040 163 VS 164 (174)
T ss_pred cc
Confidence 64
No 29
>PF09136 Glucodextran_B: Glucodextranase, domain B; InterPro: IPR015219 The glucodextranase B domain adopts a structure consisting of seven/eight-strand antiparallel beta-sheets, in a Greek-key topology, similar to the immunoglobulin beta-sandwich fold. It acts as a cell wall anchor, interacting with the S-layer present in the cell wall of Gram-positive bacteria by hydrophobic interactions. In glucodextranase, domain B is buried in the S-layer, and a flexible linker located between domain B and the catalytic unit confers motion to the catalytic unit, which is capable of efficient hydrolysis of the substrates located close to the cell surface []. ; PDB: 1UG9_A 1ULV_A.
Probab=24.91 E-value=74 Score=26.59 Aligned_cols=32 Identities=22% Similarity=0.368 Sum_probs=22.2
Q ss_pred CCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCce
Q 045536 39 HFDIVARCQGGANAGHTIYNAEGKKFALHLVPSG 72 (438)
Q Consensus 39 ~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSG 72 (438)
.+..+|| |=.|||.-++++||+++.+-+-|.|
T Consensus 16 s~t~~vs--gtt~a~kv~~~vng~~~e~pvt~~~ 47 (89)
T PF09136_consen 16 SATVHVS--GTTNAAKVYVSVNGNKTEAPVTPAG 47 (89)
T ss_dssp SSEEEEE--EEE-SSEEEEEETTEEEEE--B---
T ss_pred ceEEEEe--ccccceEEEEEeCCcEEecceeecc
Confidence 3456676 7899999999999999999998877
No 30
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=24.72 E-value=75 Score=31.05 Aligned_cols=32 Identities=25% Similarity=0.323 Sum_probs=22.7
Q ss_pred eeEecCCeEechHHHHHHHHHHHHCCCCCCCCeEEcCCcc
Q 045536 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAH 118 (438)
Q Consensus 79 ~~~ig~GvVi~p~~l~~Ei~~L~~~g~~~~~rL~Is~ra~ 118 (438)
.++||+|+|+||+++- ++.+.| .++.||+..|
T Consensus 64 ~~lIGAGTVL~~~q~~----~a~~aG----a~fiVsP~~~ 95 (211)
T COG0800 64 EALIGAGTVLNPEQAR----QAIAAG----AQFIVSPGLN 95 (211)
T ss_pred ccEEccccccCHHHHH----HHHHcC----CCEEECCCCC
Confidence 4789999999999883 333444 4577887554
No 31
>PRK12339 2-phosphoglycerate kinase; Provisional
Probab=24.65 E-value=86 Score=29.82 Aligned_cols=76 Identities=13% Similarity=0.137 Sum_probs=41.7
Q ss_pred cCCCCeEEeCCCCCcHHHHHHHHHHHHHhhccC-C----CCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCc
Q 045536 156 IRSGIRVSDLRHMDTFPQKLDFLLSNAAARFPG-F----KYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRK 230 (438)
Q Consensus 156 ~R~gir~~DL~~~~~l~~kL~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ 230 (438)
.+.|+.. +...|.+++.++.....-..+... + -+++...+.++..|.+..+.+.+. ....+..++.+|..
T Consensus 25 ~~~~~~~--~~~~D~~r~~~r~~~~~~p~l~~s~~~a~~~~~~~~~~~~~~~y~~q~~~v~~~---L~~va~~~l~~G~s 99 (197)
T PRK12339 25 RHRAIDI--VLSGDYLREFLRPYVDDEPVLAKSVYDAWEFYGSMTDENIVKGYLDQARAIMPG---INRVIRRALLNGED 99 (197)
T ss_pred HhcCCeE--EehhHHHHHHHHHhcCCCCCcccccHHHHHHcCCcchhHHHHHHHHHHHHHHHH---HHHHHHHHHHcCCC
Confidence 3456643 345567787777654211011111 0 012233455566666665655444 34556678889999
Q ss_pred EEEEec
Q 045536 231 ILVEGG 236 (438)
Q Consensus 231 ilfEGa 236 (438)
+++||+
T Consensus 100 VIvEgv 105 (197)
T PRK12339 100 LVIESL 105 (197)
T ss_pred EEEEec
Confidence 999996
No 32
>PHA02152 hypothetical protein
Probab=24.63 E-value=12 Score=31.38 Aligned_cols=25 Identities=32% Similarity=0.542 Sum_probs=15.0
Q ss_pred CcccccccCcEE-EEEcCCCccCCch
Q 045536 6 SPNRIELLSQVS-GVLGCQWGDEGKG 30 (438)
Q Consensus 6 ~~~~~~~~~~~~-~VvG~qwGDEGKG 30 (438)
||+.+..-++++ +|=|+.||.|||-
T Consensus 28 sp~~i~~a~~ii~vv~g~~~g~~~~~ 53 (96)
T PHA02152 28 SPSNIRYAENIINVVNGARFGEENKP 53 (96)
T ss_pred ChhHHHHHHHHHHhhcccchhhcCCc
Confidence 444444444433 4568899988874
No 33
>PF09358 UBA_e1_C: Ubiquitin-activating enzyme e1 C-terminal domain; InterPro: IPR018965 This presumed domain found at the C terminus of Ubiquitin-activating enzyme e1 proteins is functionally uncharacterised. ; PDB: 3CMM_A.
Probab=21.46 E-value=85 Score=27.90 Aligned_cols=27 Identities=11% Similarity=0.338 Sum_probs=22.4
Q ss_pred cHHHHHHHHHHHHHhCCCeEEEeeCCC
Q 045536 405 PKAARQFVERIEELVGVPINYIGVGPG 431 (438)
Q Consensus 405 P~~a~~yi~~iE~~~gvpi~~is~Gp~ 431 (438)
+-..++||+.+++.-|+.|.+||.|..
T Consensus 42 ~~Tl~~li~~~~~~~~lev~ml~~g~~ 68 (125)
T PF09358_consen 42 DMTLQELIDYFKEKYGLEVTMLSQGVS 68 (125)
T ss_dssp --BHHHHHHHHHHTTS-EEEEEEETTE
T ss_pred CCCHHHHHHHHHHHhCceEEEEEeCCE
Confidence 467899999999999999999999973
No 34
>KOG4612 consensus Mitochondrial ribosomal protein L34 [Translation, ribosomal structure and biogenesis]
Probab=20.34 E-value=42 Score=28.71 Aligned_cols=37 Identities=27% Similarity=0.537 Sum_probs=24.0
Q ss_pred CCCCCcc-CCcccch-hhhccCCCC-CCCCCCcccccchH
Q 045536 289 GPFPTEI-LGQGGDH-LRLAGQEFG-TTTGRPRRCGWLDI 325 (438)
Q Consensus 289 GPfPTE~-~~~~g~~-lr~~g~E~G-~tTGR~RR~GwlDl 325 (438)
+|+||.+ ++.+... -...||||. ++-.|.|..||+-.
T Consensus 43 ~~lpTp~~fg~~qQ~RwKsrGNeYQPSn~KRKrkhGfl~R 82 (105)
T KOG4612|consen 43 TPLPTPLGFGLIQQRRWKSRGNEYQPSNLKRKRKHGFLAR 82 (105)
T ss_pred CCCCCccchhHHHHHHhhhcCCccCchhhhhhhhhhhhhh
Confidence 5788885 3222111 114699998 56788999999854
No 35
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=20.32 E-value=46 Score=34.34 Aligned_cols=35 Identities=26% Similarity=0.469 Sum_probs=25.1
Q ss_pred CCccchhhcccccCCCCeEEeCCCCCcHHHHHHHHHHH
Q 045536 144 RRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLLSN 181 (438)
Q Consensus 144 g~GIGpay~dk~~R~gir~~DL~~~~~l~~kL~~~~~~ 181 (438)
.=|||-+|+.+.+|+|+++-=+- +=.+||+++...
T Consensus 58 TDGIGKayA~eLAkrG~nvvLIs---Rt~~KL~~v~kE 92 (312)
T KOG1014|consen 58 TDGIGKAYARELAKRGFNVVLIS---RTQEKLEAVAKE 92 (312)
T ss_pred CCcchHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHH
Confidence 35899999999999999965442 235566665533
No 36
>KOG2692 consensus Sialyltransferase [Carbohydrate transport and metabolism]
Probab=20.20 E-value=1e+02 Score=32.39 Aligned_cols=40 Identities=23% Similarity=0.223 Sum_probs=29.5
Q ss_pred EEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEee
Q 045536 18 GVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHL 68 (438)
Q Consensus 18 ~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hl 68 (438)
++.|.+.|+| =.++|+|.|+|+..-+||.-- ++ .|-+|++
T Consensus 165 ~L~~S~~G~e---------ID~~D~ViR~N~APt~gye~D-VG-sKTt~r~ 204 (376)
T KOG2692|consen 165 ILLNSRLGRE---------IDSHDFVIRLNLAPTKGYEKD-VG-SKTTLRT 204 (376)
T ss_pred eeCCCccccc---------cccccEEEECCCCCccchhcc-cc-cceeEEE
Confidence 3455677776 346899999999999999864 75 4556663
Done!