Query 045536
Match_columns 438
No_of_seqs 152 out of 1078
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 04:47:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045536.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045536hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dj2_A Adenylosuccinate synthe 100.0 3E-170 1E-174 1302.8 38.9 435 4-438 9-443 (443)
2 3hid_A Adenylosuccinate synthe 100.0 3E-168 1E-172 1287.7 33.2 422 16-438 4-426 (432)
3 3ue9_A Adenylosuccinate synthe 100.0 2E-167 6E-172 1287.0 30.6 423 14-438 15-446 (452)
4 2v40_A Adenylosuccinate synthe 100.0 1E-166 3E-171 1280.2 33.6 422 11-437 28-457 (459)
5 1p9b_A Adenylosuccinate synthe 100.0 2E-165 5E-170 1266.5 36.7 419 11-437 11-435 (442)
6 3r7t_A Adenylosuccinate synthe 100.0 1E-165 4E-170 1263.4 31.7 415 13-438 3-419 (419)
7 2d7u_A Adenylosuccinate synthe 100.0 5E-141 2E-145 1054.0 22.9 331 14-437 1-334 (339)
8 1qp2_A Protein (PSAE protein); 34.2 10 0.00035 29.6 0.4 32 24-55 18-49 (70)
9 1hyw_A GPW, head-TO-tail joini 26.2 1.5E+02 0.0052 22.7 5.9 42 346-422 16-57 (68)
10 1uwk_A Urocanate hydratase; hy 25.6 2E+02 0.0069 30.4 8.4 160 79-250 100-277 (557)
11 2fkn_A Urocanate hydratase; ro 24.3 2E+02 0.0068 30.4 8.1 157 79-250 96-273 (552)
12 3oig_A Enoyl-[acyl-carrier-pro 22.1 34 0.0011 31.3 1.7 40 140-179 13-53 (266)
13 3mdq_A Exopolyphosphatase; str 21.0 38 0.0013 32.9 2.0 22 406-427 89-110 (315)
No 1
>1dj2_A Adenylosuccinate synthetase; GDP, ligase; HET: GDP; 2.90A {Arabidopsis thaliana} SCOP: c.37.1.10 PDB: 1dj3_A*
Probab=100.00 E-value=3.4e-170 Score=1302.78 Aligned_cols=435 Identities=88% Similarity=1.396 Sum_probs=419.8
Q ss_pred CCCcccccccCcEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEec
Q 045536 4 NESPNRIELLSQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIG 83 (438)
Q Consensus 4 ~~~~~~~~~~~~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig 83 (438)
-+|++|++.++++++|||+|||||||||||||||+++|+|||||||+||||||++++|+||+|||||||+|+|+++|+||
T Consensus 9 ~~~~~~~~~~~~v~vVvG~QWGDEGKGKivD~La~~~dvVvR~qGG~NAGHTVv~~~g~k~~lhliPSGil~~~~~~vIG 88 (443)
T 1dj2_A 9 TESLGRIGSLSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEDTTCVIG 88 (443)
T ss_dssp ------CTTSCSEEEEEESSSSCSSHHHHHHHHGGGCSEEEECSCCTTCCEEEECSSCCEEEESSSCGGGGSTTCEEEEC
T ss_pred CCCCCCCCCccceEEEEeCCcCCCCCceEEeeeccCCCEEEecCccCCCCcEEEEeCCEEEEEEccCccccCCCceEEEC
Confidence 46788888778888999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred CCeEechHHHHHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEE
Q 045536 84 NGVVVHLPGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVS 163 (438)
Q Consensus 84 ~GvVi~p~~l~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~ 163 (438)
|||||||+.|++||+.|+++|+++.+||+||+|||||||||+++|+++|.+++.++||||||||||||+||++|+|||++
T Consensus 89 nGvVvdp~~L~~Ei~~L~~~G~~v~~rL~Is~rahli~p~H~~lD~~~E~~~g~~~IGTTgrGIGPaY~dK~~R~giRv~ 168 (443)
T 1dj2_A 89 NGVVVHLPGLFKEIDGLESNGVSCKGRILVSDRAHLLFDFHQEVDGLRESELAKSFIGTTKRGIGPAYSSKVIRNGIRVG 168 (443)
T ss_dssp TTCEECHHHHHHHHHHHHTTTCCCTTTEEEESSSEECCHHHHHHHHHHHHHSCSCCCCCCSCCHHHHHHHHHHTCCCBGG
T ss_pred CcEEEcHHHHHHHHHHHHHcCCCCCCCEEEcCCCCCCCchHHHHHHHHHHhcCCCCCCCCCCCcHHHhHhhhhccCcEee
Confidence 99999999999999999999987779999999999999999999999999999899999999999999999999999999
Q ss_pred eCCCCCcHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEecccccccc
Q 045536 164 DLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDI 243 (438)
Q Consensus 164 DL~~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDi 243 (438)
||+|++.|++||+.+++++|.++..+..++.++++++++|++|+++|+||++|+..+|++++++||+||||||||+|||+
T Consensus 169 DL~d~~~~~~kl~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~vLfEGAQG~lLDi 248 (443)
T 1dj2_A 169 DLRHMDTLPQKLDLLLSDAAARFQGFKYTPEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQATMLDI 248 (443)
T ss_dssp GGGCTTTHHHHHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHTTTEECHHHHHHHHHHTTCCEEEEEEEEGGGCT
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHhccCcCCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHCCCeEEEEecchhhhhh
Confidence 99999999999999999999999886555567999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCcccCCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccc
Q 045536 244 DFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWL 323 (438)
Q Consensus 244 d~GtYP~VTSS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~Gwl 323 (438)
|||||||||||||+++|+|+|+|++|+.|++||||+|||+||||+||||||++++.|++||+.|+|||+|||||||||||
T Consensus 249 D~GtYPyVTSSnttagga~~G~Gi~P~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~l~~~G~E~GttTGR~RRcGWf 328 (443)
T 1dj2_A 249 DFGTYPFVTSSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDLLRLAGQEFGTTTGRPRRCGWL 328 (443)
T ss_dssp TTSSTTSSCSSCCSTHHHHHTTTCCTTTCCCEEEEEESEEEESSSSCCTTBCCSHHHHHHHHHHTCBCTTTCCBCEEEEE
T ss_pred ccCcCcCCCCCcchHhhhhhccCCCcccCCeEEEEEEecCCcccCCCCCCcCCchhhHHhhhcCCeeCCCCCCCccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCC
Q 045536 324 DIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSD 403 (438)
Q Consensus 324 Dlv~lrya~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~ 403 (438)
|+|++|||+++||+|+||||||||||+|++||||++|++++|+++++||++++.|++|+|||++||||+++++++|+|++
T Consensus 329 D~v~lrya~~inG~t~lalTkLDvLd~~~~ikicv~Y~~~~G~~~~~~P~~~~~l~~~~PvYe~~pGW~~~~~~~r~~~~ 408 (443)
T 1dj2_A 329 DIVALKFSCQINGFASLNLTKLDVLSDLNEIQLGVAYKRSDGTPVKSFPGDLRLLEELHVEYEVLPGWKSDISSVRNYSD 408 (443)
T ss_dssp EHHHHHHHHHHHTCSEEEEECGGGGGGCSEEEEEEEEECSSSCBCCSCCSCHHHHHHCEEEEEEEECCCSCCTTCCSSTT
T ss_pred hHHHHHHHHHHcCCCeEEEECcCcCCCCCceeEEEEEEcCCCeEeeeCCCChHHhccceEEEEECCCCCcccccCcchhh
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCeEEEeeCCCccccccC
Q 045536 404 LPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 404 LP~~a~~yi~~iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
||+|||+||++||+++|+||.|||+||+|+|||.|
T Consensus 409 LP~~a~~Yi~~iEe~~gvpv~~is~GP~R~~ti~r 443 (443)
T 1dj2_A 409 LPKAAQQYVERIEELVGVPIHYIGIGPGRDALIYK 443 (443)
T ss_dssp SCHHHHHHHHHHHHHHCSCEEEEECSSSSSCEEEC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEeCCCHHHeecC
Confidence 99999999999999999999999999999999975
No 2
>3hid_A Adenylosuccinate synthetase; niaid structural genomics, virulence associated factor, PURA, purine ribonucleotide biosynthesis, cytoplasm; 1.60A {Yersinia pestis CO92} SCOP: c.37.1.10 PDB: 1kjx_A* 1kkb_A* 1kkf_A* 1ade_A 1adi_A 1cg0_A* 1ch8_A* 1cib_A* 1gim_A* 1gin_A* 1hon_A* 1hoo_A* 1hop_A* 1juy_A* 1ksz_A* 1nht_A* 1qf4_A* 1qf5_A* 1son_A* 1soo_A* ...
Probab=100.00 E-value=3.3e-168 Score=1287.71 Aligned_cols=422 Identities=45% Similarity=0.772 Sum_probs=405.2
Q ss_pred EEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHHHH
Q 045536 16 VSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFN 95 (438)
Q Consensus 16 ~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l~~ 95 (438)
.++|||+|||||||||||||||+++|+|||||||+||||||+ ++|++|+|||||||+|+|+++|+|||||||||++|++
T Consensus 4 ~~vVvG~QwGDEGKGKivD~La~~~dvVvR~qGG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~vIGnGvVvdp~~l~~ 82 (432)
T 3hid_A 4 NVVVLGTQWGDEGKGKVVDLLTERAKYVVRYQGGHNAGHTLV-INGEKTVLHLIPSGILRENVISIIGNGVVLAPDALMK 82 (432)
T ss_dssp CEEEEESSSSCSCHHHHHHHHHTTCSEEEECSBCSCCCEEEE-ETTEEEEESSSCTTTTSTTCEEEECTTBCBCHHHHHH
T ss_pred cEEEEcCCcccCCCceeeeeecCcCCEEEEcCCcCCCCCeEE-ECCEEEEEEecCceecCCCCeEEEcCCEEEcHHHHHH
Confidence 779999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHHHH
Q 045536 96 EIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQKL 175 (438)
Q Consensus 96 Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~kL 175 (438)
||+.|+++|++..+||+||+||||+||||+++|+++|.+++.++||||||||||||+||++|+|||++||+|++.|++||
T Consensus 83 Ei~~L~~~Gv~~~~rL~Is~rahli~p~H~~lD~~~E~~~g~~~iGTTgrGIGPaY~dK~~R~giRv~DL~~~~~~~~kl 162 (432)
T 3hid_A 83 EMTELEARGVPVRERLLLSEACPLILPYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVSDLFNKETFAIKL 162 (432)
T ss_dssp HHHHHHHTTCCHHHHEEECTTCBBCCHHHHHHHHHHHHTCC--------TTHHHHHHHHHHTCSCBGGGGGSHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCEEECCCceECChHHHHhhhhhHhhcCCCCcCCCCCCcHHHhhhhccccCceeehhcCHHHHHHHH
Confidence 99999999998668999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccC-CCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcccCC
Q 045536 176 DFLLSNAAARFPG-FKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVTSS 254 (438)
Q Consensus 176 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~VTSS 254 (438)
+.++++++.++.. ++.++.++++++++|++++++|+||++|+..+|++++++||+||||||||+|||+|||||||||||
T Consensus 163 ~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~iLfEGAQG~lLDiD~GtYP~VTSS 242 (432)
T 3hid_A 163 KEIVEYHNFQLVHYYKEAAVDYQKVLDDVLAIADILTAMVVDVSELLDNARKQGELIMFEGAQGTLLDIDHGTYPYVTSS 242 (432)
T ss_dssp HHHHHHHHHHHHHTSCCCCCCHHHHHHHHHHHHHHHHTTBCCHHHHHHHHHHTTCCEEEECCSCGGGCTTTSSTTSCCSS
T ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHCCCeEEEEecchhhhccccCcCCCcCCC
Confidence 9999999988765 466678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHHHHHh
Q 045536 255 SPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQI 334 (438)
Q Consensus 255 ~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lrya~~i 334 (438)
||+++|+|+|+|++|+.|++||||+|||+||||+||||||++++.|++||+.|+|||+||||||||||||+|++|||+++
T Consensus 243 nt~agga~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~G~E~G~tTGR~RRcGW~D~v~lrya~~i 322 (432)
T 3hid_A 243 NTTAGGVATGSGLGPRYVDYVLGIVKAYSTRVGAGPFPTELNDETGEFLRKQGNEYGATTGRSRRTGWLDIVAVRRAVQI 322 (432)
T ss_dssp CCSGGGHHHHHCCCGGGCCEEEEEEESEEEECSSSCCTTBCCSHHHHHHHHHTTCCCSSTTCCCEEEEEEHHHHHHHHHH
T ss_pred CcchhhHhhccCCCchhcceEEEEEEECcccccCCCCCCccCcchHHHHHhcCCccCCcCCCCccccchhHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHHHHH
Q 045536 335 NGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVER 414 (438)
Q Consensus 335 ng~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ 414 (438)
||+|+||||||||||+|++||||++|++++|+++++||++++.|++|+|||++||||+++++++|+|++||+|||+||++
T Consensus 323 nG~t~lalTkLDvLd~~~~ikvcv~Y~~~~G~~~~~~P~~~~~l~~~~pvYe~~pGW~~~~~~~~~~~~LP~~a~~Yi~~ 402 (432)
T 3hid_A 323 NSLSGFCMTKLDVLDGLKEVKLCVGYRMPDGREVDTTPLAAEGWEGIEPIYETMPGWSETTFGVKEHSKLPQAALNYIQR 402 (432)
T ss_dssp HTCCEEEEECGGGGTTCSEEEEEEEEECTTSCEESSCCCTTTCSTTCEEEEEEEECCSSCSTTCCSGGGSCHHHHHHHHH
T ss_pred cCCCeEEEecceecCCCCceeEEEEEEcCCCeEEeeCCCCHHHhCCceEEEEeCCCCccccccCCChhHcCHHHHHHHHH
Confidence 99999999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCeEEEeeCCCccccccC
Q 045536 415 IEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 415 iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
||+++|+||+|||+||+|+|||.+
T Consensus 403 iEe~~gvpv~~is~GP~R~~~I~~ 426 (432)
T 3hid_A 403 VEELTGVPIDIISTGPDRDETMIL 426 (432)
T ss_dssp HHHHHSCCEEEEECSSBTTSEEES
T ss_pred HHHHHCCCEEEEEcCCCHHHeEec
Confidence 999999999999999999999863
No 3
>3ue9_A Adenylosuccinate synthetase; ssgcid, ligase, ADSS, BTH_I2245, IMP-aspartate ligase, struc genomics; 1.95A {Burkholderia thailandensis}
Probab=100.00 E-value=1.7e-167 Score=1286.98 Aligned_cols=423 Identities=44% Similarity=0.724 Sum_probs=398.5
Q ss_pred CcEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechHHH
Q 045536 14 SQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGL 93 (438)
Q Consensus 14 ~~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~~l 93 (438)
|+.++|||+|||||||||||||||+++|+|||||||+||||||+ ++|++|+|||||||+|+|+++|+|||||||||++|
T Consensus 15 M~~~vVvG~QwGDEGKGKivD~La~~~dvVvR~qGG~NAGHTVv-~~g~k~~lhllPSGil~~~~~~vIGnGvVvdp~~l 93 (452)
T 3ue9_A 15 GRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLI-IGGKKTILRLIPSGIMREGVACYIGNGVVLSPEAL 93 (452)
T ss_dssp TCCEEEEESSSSCSCHHHHHHHHHTTCSEEEECSBCCC--CC-----CCCCCCSSSCGGGGSTTCEEEECTTBEECHHHH
T ss_pred cceEEEEeCCcccCCCceeeeeecCcCCEEEEcCCcCCCCceEE-ECCEEEEEEecCceeccCCCcEEEcCCEEEcHHHH
Confidence 77889999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcHHH
Q 045536 94 FNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTFPQ 173 (438)
Q Consensus 94 ~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l~~ 173 (438)
++||+.|+++|++..+||+||+||||+||||+++|+++|.+++.++||||||||||||+||++|+|||++||+|++.|++
T Consensus 94 ~~Ei~~L~~~Gv~~~~rL~Is~rahli~p~H~~lD~~~E~~~g~~~iGTTgrGIGPaY~dK~~R~giRv~DL~d~~~~~~ 173 (452)
T 3ue9_A 94 FKEIGELEEAGLSVRERLFISEATTLILPYHIAIDQAREARKGAGKIGTTGRGIGPAYEDKVGRRALRVQDLFDARTFAD 173 (452)
T ss_dssp HHHHHHHHHTTCCCGGGEEEETTCEECCHHHHHHHHHHHHC----------CCHHHHHHHHHTTCCCBGGGGGCHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCEEECCCceECCHHHHHhhhhhhhhccCCccccCCCCcHHHhhhhccccCceeehhcCHHHHHH
Confidence 99999999999987689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccC-CCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCccc
Q 045536 174 KLDFLLSNAAARFPG-FKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFVT 252 (438)
Q Consensus 174 kL~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~VT 252 (438)
||+.+++.++.++.. ++..+.++++++++|++++++|+||++|+..+|++++++||+||||||||+|||+|||||||||
T Consensus 174 kl~~~~~~~~~~l~~~~~~~~~d~e~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~ILfEGAQG~lLDiD~GtYPyVT 253 (452)
T 3ue9_A 174 RLRENLDFHNFVLTQYLGGAAVDFQATLDTMLGYADRLRPMVADVSRRLYEENHAGRNLLFEGAQGTLLDIDHGTYPFVT 253 (452)
T ss_dssp HHHHHHHHHHHHHHHTSCCCCCCHHHHHHHHHTTHHHHGGGEECHHHHHHHHHHTTCCEEEECCSCGGGCTTTSSTTSSC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHcCCcEEEEecchhhhccccCcCCCcC
Confidence 999999999988765 4666778999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCC--------cccchhhhccCCCCCCCCCCcccccch
Q 045536 253 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILG--------QGGDHLRLAGQEFGTTTGRPRRCGWLD 324 (438)
Q Consensus 253 SS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~--------~~g~~lr~~g~E~G~tTGR~RR~GwlD 324 (438)
||||+++|+|+|+|++|+.|++||||+|||+||||+||||||+++ +.|++||+.|+|||+||||||||||||
T Consensus 254 SSnt~agga~~G~Gi~P~~i~~ViGV~KAYtTRVG~GPFPTEl~~~~~~~~~~e~g~~Lr~~G~E~GttTGR~RRcGW~D 333 (452)
T 3ue9_A 254 SSNCVAGAAAAGAGVGPQKLNYILGITKAYCTRVGSGPFPSELYDADNPSRQDQIGITLANVGKEFGSVTGRPRRTGWLD 333 (452)
T ss_dssp SSCCSTTHHHHHHTCCGGGCCEEEEEEESEEEECSSSCCTTEEECTTCTTCBCHHHHHHHHHTTCBCTTTCCBCEEEEEE
T ss_pred CCCcchhhHhhccCCCchhcceEEEEEEeccccccCCCCCccccccccccccccHHHHHhhcCCCcCCcCCCCccCcccc
Confidence 999999999999999999999999999999999999999999998 899999999999999999999999999
Q ss_pred HHHHHHHHHhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCc
Q 045536 325 IVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDL 404 (438)
Q Consensus 325 lv~lrya~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~L 404 (438)
+|++|||+++||+|+||||||||||+|++||||++|++ +|+++++||++++.|++|+|||++||||+++++++|+|++|
T Consensus 334 ~v~lrya~~inG~t~lalTkLDvLd~~~~ikvcvaY~~-~G~~~~~~P~~~~~l~~~~pvYe~~pGW~~~~~~~r~~~~L 412 (452)
T 3ue9_A 334 AAALRRSIQINGVSGLCMTKLDVLDGLDEVKLCVGYKI-DGEDADLLPRGAAEVARCEPVYETFGGWKESTVGINSWDAL 412 (452)
T ss_dssp HHHHHHHHHHHTCCEEEEECGGGGTTCSEEEEEEEEEE-TTEEECSCCSSHHHHHHCEEEEEEEECCCSCCTTCCSGGGS
T ss_pred HHHHHHHHHHcCCCeEEEecchhhcCCCceeEEEEEec-CCEEEecCCCCHHHhCCcEEEEEeCCCCccccccCCChhHc
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCCeEEEeeCCCccccccC
Q 045536 405 PKAARQFVERIEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 405 P~~a~~yi~~iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
|+|||+||++||+++|+||+|||+||+|+|||.+
T Consensus 413 P~~a~~Yi~~IEe~~gvpV~~is~GP~R~~~I~~ 446 (452)
T 3ue9_A 413 PANARAYLTRVQEVAGVPIDMVSTGPDRDETILL 446 (452)
T ss_dssp CHHHHHHHHHHHHHHTSCEEEEECSSSTTSEEES
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEcCCCHHHeeec
Confidence 9999999999999999999999999999999863
No 4
>2v40_A Adenylosuccinate synthetase isozyme 2; ligase, purine biosynthesis, metal- binding, purine metabolism, nucleotide-binding, GDP, ADSS2, magnesium; HET: GDP; 1.9A {Homo sapiens} PDB: 1iwe_A* 1j4b_A 1lny_A* 1lon_A* 1loo_A* 1mez_A* 1mf0_A* 1mf1_A* 2dgn_A*
Probab=100.00 E-value=9.6e-167 Score=1280.21 Aligned_cols=422 Identities=50% Similarity=0.912 Sum_probs=403.9
Q ss_pred cccCcEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEech
Q 045536 11 ELLSQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHL 90 (438)
Q Consensus 11 ~~~~~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p 90 (438)
...+++++|||+|||||||||||||||+++|+|||||||+||||||+ ++|+||+|||||||+|+|+++|+|||||||||
T Consensus 28 ~~~~~v~vVvG~QWGDEGKGKivD~La~~~dvVvR~qGG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~vIGnGvVvdp 106 (459)
T 2v40_A 28 PGGNRVTVVLGAQWGDEGKGKVVDLLAQDADIVCRCQGGNNAGHTVV-VDSVEYDFHLLPSGIINPNVTAFIGNGVVIHL 106 (459)
T ss_dssp -CCCCEEEEEESSSSCSSHHHHHHHHHTTCSEEEECSBCSCCCEEEE-ETTEEEEESSSCGGGGSTTCEEEECTTBEEEH
T ss_pred CCCeeEEEEEecCcCCCCCceEEEEeccCCCEEeecCccCCCCcEEE-ECCEEEEEEccCccccCCCceEEECCcEEEcH
Confidence 55688889999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH--CCCC-CCCCeEEcCCccccchhhHHhhHHHHHHhcCCc---ccccCCccchhhcccccCCCCeEEe
Q 045536 91 PGLFNEIDDLEA--NGVS-CKGRILVSDRAHLLFDFHQEVDGLREAELVKSF---IGTTRRGIGPAYSSKVIRSGIRVSD 164 (438)
Q Consensus 91 ~~l~~Ei~~L~~--~g~~-~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~---iGTTg~GIGpay~dk~~R~gir~~D 164 (438)
+.|++||+.|++ +|++ +.+||+||+|||||||||+++|+++|.+++.++ ||||||||||||+||++|+|||++|
T Consensus 107 ~~L~~Ei~~L~~~~~Gv~~~~~rL~IS~rahli~p~H~~lD~~~E~~~g~~~~~~IGTTgrGIGPaY~DK~~R~giRv~D 186 (459)
T 2v40_A 107 PGLFEEAEKNVQKGKGLEGWEKRLIISDRAHIVFDFHQAADGIQEQQRQEQAGKNLGTTKKGIGPVYSSKAARSGLRMCD 186 (459)
T ss_dssp HHHHHHHHHHHHHCGGGTTGGGSEEEETTCEEECHHHHHHHHHHHHC------------CCCHHHHHHHHHHTCCCBHHH
T ss_pred HHHHHHHHHHHhhhcCCCCCCCCEEEeCCccCCCccHHHhhHHHHHhcCCCCCCCcCCCCCCcHHHHHhhhhccccEeeh
Confidence 999999999999 8864 568999999999999999999999999998777 9999999999999999999999999
Q ss_pred CC-CCCcHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHH-HCCCcEEEEeccccccc
Q 045536 165 LR-HMDTFPQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESI-AQKRKILVEGGQATMLD 242 (438)
Q Consensus 165 L~-~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al-~~gk~ilfEGaQG~lLD 242 (438)
|+ |++.|++||+.+++++|.++..+. .++++++++|++|+++|+||++|++.+|++|+ ++||+||||||||+|||
T Consensus 187 L~~d~~~~~~kl~~~~~~~n~~l~~~~---~d~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~~gk~VLfEGAQG~lLD 263 (459)
T 2v40_A 187 LVSDFDGFSERFKVLANQYKSIYPTLE---IDIEGELQKLKGYMEKIKPMVRDGVYFLYEALHGPPKKILVEGANAALLD 263 (459)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHCTTCC---CCHHHHHHHHHHHHHHHGGGEECHHHHHHHHHHSSCCCEEEECCSCGGGC
T ss_pred hccCHHHHHHHHHHHHHHHHHHHhhCC---CCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHhCCCEEEEEechhhhhh
Confidence 97 999999999999999999999873 67999999999999999999999999999999 89999999999999999
Q ss_pred cCCCcCCcccCCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCccccc
Q 045536 243 IDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGW 322 (438)
Q Consensus 243 id~GtYP~VTSS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~Gw 322 (438)
+|||||||||||||+++|+|+|+|++|+.|++||||+|||+||||+||||||++++.|+.||+.|+|||+||||||||||
T Consensus 264 iD~GTYPyVTSSnttagga~~G~Gi~P~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~L~~~G~E~GttTGR~RRcGW 343 (459)
T 2v40_A 264 IDFGTYPFVTSSNCTVGGVCTGLGMPPQNVGEVYGVVKAYTTRVGIGAFPTEQDNEIGELLQTRGREFGVTTGRKRRCGW 343 (459)
T ss_dssp TTTSSTTSSCSSCCSTHHHHHHHTCCGGGEEEEEEEEESSEEESSSSCCTTBCCSHHHHHHHHHTTCBCTTTCCBCEEEC
T ss_pred cccCcCcCCCCCcchHhhhhhccCCCcccCCeEEEEEeeccceecCCCCCcccChhHHHHhhhcCCcccCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCC
Q 045536 323 LDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYS 402 (438)
Q Consensus 323 lDlv~lrya~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~ 402 (438)
||+|++|||+++||+|+||||||||||+|++||||++|++ +|+++++||++++.|++|+|||++||||+++++++|+|+
T Consensus 344 fD~v~lrya~~inG~t~lalTKLDvLd~l~~ikvcvaY~~-~G~~~~~~P~~~~~l~~~~PvYe~~pGW~~d~~~~r~~~ 422 (459)
T 2v40_A 344 LDLVLLKYAHMINGFTALALTKLDILDMFTEIKVGVAYKL-DGEIIPHIPANQEVLNKVEVQYKTLPGWNTDISNARAFK 422 (459)
T ss_dssp EEHHHHHHHHHHHCCSEEEEECGGGGGGCSEEEEEEEEEE-TTEEESSCCSSHHHHTTCEEEEEEEECCCSCCTTCCSGG
T ss_pred chHHHHHHHHHHcCCCeEEEECcCcCCCCCeeeEEEEEee-CCEEeeeCCCChHHhhcceEEEEECCCCCcccccccchh
Confidence 9999999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHhCCCeEEEeeCCCcccccc
Q 045536 403 DLPKAARQFVERIEELVGVPINYIGVGPGRDALIF 437 (438)
Q Consensus 403 ~LP~~a~~yi~~iE~~~gvpi~~is~Gp~r~~~i~ 437 (438)
+||+|||+||++||+++|+||.|||+||+|+|||.
T Consensus 423 dLP~~A~~Yi~~IEe~~gvpV~~is~GP~R~~ti~ 457 (459)
T 2v40_A 423 ELPVNAQNYVRFIEDELQIPVKWIGVGKSRESMIQ 457 (459)
T ss_dssp GSCHHHHHHHHHHHHHHTCCEEEEECSSSTTSEEE
T ss_pred hCCHHHHHHHHHHHHHHCCCEEEEEeCCCHHHeec
Confidence 99999999999999999999999999999999985
No 5
>1p9b_A Adenylosuccinate synthetase; ligase; HET: IMO GDP; 2.00A {Plasmodium falciparum} SCOP: c.37.1.10
Probab=100.00 E-value=1.6e-165 Score=1266.46 Aligned_cols=419 Identities=44% Similarity=0.793 Sum_probs=405.0
Q ss_pred cccCcEEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEech
Q 045536 11 ELLSQVSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHL 90 (438)
Q Consensus 11 ~~~~~~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p 90 (438)
...|++++|||+|||||||||||||||+++|+|||||||+||||||+ ++|++|+|||||||+|+|+++|+|||||||||
T Consensus 11 ~~~~~~vvVvG~QWGDEGKGKivD~La~~~d~VvR~qGG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~vIGnGvVvdp 89 (442)
T 1p9b_A 11 VDKGNVVAILGAQWGDEGKGKIIDMLSEYSDITCRFNGGANAGHTIS-VNDKKYALHLLPCGVLYDNNISVLGNGMVIHV 89 (442)
T ss_dssp ---CCEEEEEESSSSCSSHHHHHHHHGGGCSEEEECSCCTTCCEEEE-ETTEEEEESSSCTTTTSTTCEEEECTTCEECH
T ss_pred ccccCceEEEcCCcCCCCCceEEeeecccCCEEEEcCccCCCCcEEE-ECCEEEEEEecCccccCCCceEEECCcEEEcH
Confidence 45788889999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHh--cCCcccccCCccchhhcccccCCCCeEEeCCCC
Q 045536 91 PGLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAEL--VKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHM 168 (438)
Q Consensus 91 ~~l~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~--g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~ 168 (438)
+.|++||+.|+++ ++ +||+||+||||+||||+++|+++|.++ |.++||||||||||||+||++|+|||++||+|+
T Consensus 90 ~~L~~Ei~~L~~~-v~--~rL~IS~rahli~p~H~~lD~~~E~~~~~g~~~IGTTgrGIGPaY~dK~~R~giRv~DL~d~ 166 (442)
T 1p9b_A 90 KSLMEEIESVGGK-LL--DRLYLSNKAHILFDIHQIIDSIQETKKLKEGKQIGTTKRGIGPCYSTKASRIGIRLGTLKNF 166 (442)
T ss_dssp HHHHHHHHHHCTT-GG--GGEEEETTSEECCHHHHHHHHHHHHHHHHTTCCCCCCSSSHHHHHHHHHTTCCCBGGGGGSH
T ss_pred HHHHHHHHHHHhh-cc--CCEEECCCccCCChhHHHHHHHhHHhhhcCCCCCCCCCCCcHHHHHHHHhccccEehHhcCH
Confidence 9999999999887 44 899999999999999999999999999 778999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcC
Q 045536 169 DTFPQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTY 248 (438)
Q Consensus 169 ~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtY 248 (438)
+.|++||+.+++++...+. .++.++++++++|++++++|+||++|++.+|++++++||+||||||||+|||+|||||
T Consensus 167 ~~~~~kl~~~~~~~~~~y~---~~~~d~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~vLfEGAQG~lLDiD~GtY 243 (442)
T 1p9b_A 167 ENFKNMYSKLIDHLMDLYN---ITEYDKEKELNLFYNYHIKLRDRIVDVISFMNTNLENNKKVLIEGANAAMLDIDFGTY 243 (442)
T ss_dssp HHHHHHHHHHHHHHHHHTT---CCCCCHHHHHHHHHHHHHHHGGGEECHHHHHHHHHHTTCCEEEECCSCGGGCTTTSST
T ss_pred HHHHHHHHHHHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHCCCeEEEEeccHhhhhhcCCcC
Confidence 9999999999999965443 4567799999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHH
Q 045536 249 PFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVAL 328 (438)
Q Consensus 249 P~VTSS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~l 328 (438)
||||||||+++|+|+|+|++|+.|++||||+|||+||||+||||||++++.|++||+.|+|||+||||||||||||+|++
T Consensus 244 PyVTSSnttagga~~G~Gi~P~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~G~E~GttTGR~RRcGWfD~v~l 323 (442)
T 1p9b_A 244 PYVTSSCTTVGGVFSGLGIHHKKLNLVVGVVKSYLTRVGCGPFLTELNNDVGQYLREKGHEYGTTTKRPRRCGWLDIPML 323 (442)
T ss_dssp TSSCSSCCSHHHHHHTTTCCGGGCCEEEEEEESSEEECSSSCCTTBCCSHHHHHHHHHTTCBCTTTCCBCEEECEEHHHH
T ss_pred cCccCccchHhHHHhccCCCcccCCeEEEEEeeccceecCCCCCcccchHHHHHHHhcCCeeCCcCCCCccCCcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcceeeeecccccCCCCCceEEEeee--ecCCcccc--cCCCChhhhccCeEeEEEcCCCccccccccCCCCc
Q 045536 329 KYCCQINGFSSLNLTKLDVLSELPEIQLGVAYK--RVDGTPIK--SFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDL 404 (438)
Q Consensus 329 rya~~ing~~~lalTklDvL~~~~~ikIc~~Y~--~~~G~~~~--~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~L 404 (438)
|||+++||+|+||||||||||+|++||||++|+ + +|++++ +||++++.|++|+|||++||||+++++++|+|++|
T Consensus 324 rya~~inG~t~lalTkLDvLdgl~~ikicv~Y~~~~-~G~~~~~~~~P~~~~~l~~~~PvYe~~pGW~~~~~~~r~~~~L 402 (442)
T 1p9b_A 324 LYVKCINSIDMINLTKLDVLSGLEEILLCVNFKNKK-TGELLEKGCYPVEEEISEEYEPVYEKFSGWKEDISTCNEFDEL 402 (442)
T ss_dssp HHHHHHHCCSEEEEECGGGGTTCSEEEEEEEEEETT-TCCBCCTTCCCCSHHHHTTEEEEEEEEECCCSCCTTCCSGGGS
T ss_pred HHHHHHcCCCeEeeecccccCCCCceeEEEEEeecc-CCEEeecCcCCCChHHhccceEEEEECCCCCcccccccchhhC
Confidence 999999999999999999999999999999999 8 999999 99999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCCeEEEeeCCCcccccc
Q 045536 405 PKAARQFVERIEELVGVPINYIGVGPGRDALIF 437 (438)
Q Consensus 405 P~~a~~yi~~iE~~~gvpi~~is~Gp~r~~~i~ 437 (438)
|+|||+||++||+++|+||.|||+||+|+|+|.
T Consensus 403 P~~a~~Yi~~IEe~~gvpv~~is~GP~R~~ii~ 435 (442)
T 1p9b_A 403 PENAKKYILAIEKYLKTPIVWIGVGPNRKNMIV 435 (442)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECSSSTTCEEE
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEeCCCHHHeec
Confidence 999999999999999999999999999999654
No 6
>3r7t_A Adenylosuccinate synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: CIT PGE; 2.30A {Campylobacter jejuni} SCOP: c.37.1.0
Probab=100.00 E-value=1.2e-165 Score=1263.36 Aligned_cols=415 Identities=43% Similarity=0.771 Sum_probs=395.2
Q ss_pred cCc-EEEEEcCCCccCCchhhhhhhccCCcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechH
Q 045536 13 LSQ-VSGVLGCQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLP 91 (438)
Q Consensus 13 ~~~-~~~VvG~qwGDEGKGkivD~La~~~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~ 91 (438)
.|+ .++|||+|||||||||||||||+++|+|||||||+||||||+ ++|++|+|||||||+|+|+++|+|||||||||+
T Consensus 3 ~M~~~~vVvG~QwGDEGKGKivD~La~~~dvVvR~qGG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~vIGnGvVvdp~ 81 (419)
T 3r7t_A 3 AMSKADIIVGIQWGDEGKGKVVDKLCENYDFVCRSAGGHNAGHTIW-VNGVRYALHLMPSGVLHPRCINIIGNGVVVSPE 81 (419)
T ss_dssp -CCCEEEEEECSSSCSCHHHHHHHHHTTCSEEEECSBCTTSSEEEE-ETTEEEEESSSCGGGGSTTCEEEECTTBEECHH
T ss_pred CCcceeEEEeCCcccCCCceeeeeecccCCEEEEcCCcCCCCcEEE-ECCEEEEEEecCceEcCCCCeEEECCCEEEcHH
Confidence 355 889999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcH
Q 045536 92 GLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTF 171 (438)
Q Consensus 92 ~l~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l 171 (438)
+|++||+.|++ ++ +||+||+||||+||||+++|+++|.+++.++||||||||||||+||++|+|||++||+|++.|
T Consensus 82 ~l~~Ei~~L~~--v~--~rL~Is~rahli~p~H~~~D~~~E~~~g~~~iGTTgrGIGPaY~dK~~R~giRv~DL~~~~~~ 157 (419)
T 3r7t_A 82 VLIAEMAQFEN--LK--GRLYISDRAHLNLKHHSLIDIAKEKLKGKNAIGTTGKGIGPSYADKINRTGHRVGELLEPQRL 157 (419)
T ss_dssp HHHHHHTTSSC--CT--TTEEEETTSEECCHHHHHHHHHHHHHCCT--------THHHHHHHHHTTCCCBGGGGGSHHHH
T ss_pred HHHHHHHHHhc--cC--CCEEECCCCCCCChHHHHhhhhhhhhcCCCCcCCCCCChHHhhhhhccccCceeehhcCHHHH
Confidence 99999999976 54 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccC-CCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCc
Q 045536 172 PQKLDFLLSNAAARFPG-FKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPF 250 (438)
Q Consensus 172 ~~kL~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~ 250 (438)
++||+.+++.++ ++.. ++.++.++++++++|++++++|+||++|+..+|++++++||+||||||||+|||+|||||||
T Consensus 158 ~~kl~~~~~~~~-~l~~~~~~~~~~~e~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~iLfEGAQG~lLDid~GtYP~ 236 (419)
T 3r7t_A 158 CEALIKDFEANK-TFFEMLEIEIPSAEELLADLKRFNEILTPYITDTTRMLWKALDEDKRVLLEGAQGSMLDIDHGTYPY 236 (419)
T ss_dssp HHHHHHHHHHTH-HHHHHTTCCCCCHHHHHHHHHHHHHHHGGGEECHHHHHHHHHHTTCCEEEECCSCGGGCTTTSSTTS
T ss_pred HHHHHHHHHHHH-HHHHhcCCCCCCHHHHHHHHHHHHHHhccccccHHHHHHHHHHcCCcEEEEecchhhhccccCcCCC
Confidence 999999999999 6654 56667889999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhccCCCCCCCCCCcccccchHHHHHH
Q 045536 251 VTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKY 330 (438)
Q Consensus 251 VTSS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g~E~G~tTGR~RR~GwlDlv~lry 330 (438)
||||||+++|+|+|+|++|+.|++||||+|||+||||+||||||++++.|++||+.|+|||+||||||||||||+|++||
T Consensus 237 VTSSnt~a~ga~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~G~E~GttTGR~RRcGw~D~v~lry 316 (419)
T 3r7t_A 237 VTSSSTISAGTLTGLGLNPKEAGNIIGIVKAYATRVGNGAFPTEDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRY 316 (419)
T ss_dssp SCSSCCSHHHHHHHHTCCGGGEEEEEEEEESSEEESSSSCCTTBCCSHHHHHHHHHTTCBCTTTCCBCEEECEEHHHHHH
T ss_pred cCCCCcchhhHhhccCCCchhcceEEEEEEeccccccCCCCCCcCCchhHHHHHhcCCCcCCcCCCCccccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHH
Q 045536 331 CCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQ 410 (438)
Q Consensus 331 a~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~ 410 (438)
|+++||+|+||||||||||+|++||||++|++ +|+++++||+++ ++|+|||++|||| ++++++|+|++||+|||+
T Consensus 317 a~~ing~t~lalTkLDvL~~~~~ikvcv~Y~~-~G~~~~~~P~~~---~~~~pvYe~~pGW-~~~~~~~~~~~LP~~a~~ 391 (419)
T 3r7t_A 317 TARLNGLDALSLMKLDVLDGFEKIKICRAYEY-KGMEIDYIPSDL---ENVQPIYEEMDGW-DKVFGIKDYDLLPENAKK 391 (419)
T ss_dssp HHHHHTCSEEEEECGGGGTTCSEEEEEEEEEE-TTEEESSCCSCG---GGEEEEEEEEECC-SCCTTCCCGGGSCHHHHH
T ss_pred HHHhcCCCeEEEecchhhcCCCceeEEEEEee-CCEEEeeCCCCc---cccEEEEEecCCc-hhccCCCChHHccHHHHH
Confidence 99999999999999999999999999999999 999999999976 7999999999999 999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEeeCCCccccccC
Q 045536 411 FVERIEELVGVPINYIGVGPGRDALIFK 438 (438)
Q Consensus 411 yi~~iE~~~gvpi~~is~Gp~r~~~i~~ 438 (438)
||++||+++|+||.|||+||+|+|||.+
T Consensus 392 yi~~iEe~~gvpv~~is~GP~R~~~I~~ 419 (419)
T 3r7t_A 392 YIARLEELAGVKVKYISTSPERDDTIIL 419 (419)
T ss_dssp HHHHHHHHHTSCEEEEECSSSTTCEEEC
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHeEeC
Confidence 9999999999999999999999999864
No 7
>2d7u_A Adenylosuccinate synthetase; structural genomics, conserved hypothetical protein, NPPSFA; 2.50A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.6e-141 Score=1054.04 Aligned_cols=331 Identities=38% Similarity=0.680 Sum_probs=306.5
Q ss_pred CcEEEEEcCCCccCCchhhhhhhccC--CcEEEEcCCCCCCCcEEEEcCCeEEEEeecCceeecCCceeEecCCeEechH
Q 045536 14 SQVSGVLGCQWGDEGKGKLVDILAEH--FDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLP 91 (438)
Q Consensus 14 ~~~~~VvG~qwGDEGKGkivD~La~~--~d~VVRf~GG~NAGHTVv~~~g~~~~~hllPSGil~~~~~~~ig~GvVi~p~ 91 (438)
|+.++|||+|||||||||||||||++ +|+|||||||+||||||+ ++|++|+|||||||+|+|+++|+||||||+||+
T Consensus 1 M~~vvVvG~qwGDEGKGKivD~La~~~~~d~VvR~qGG~NAGHTVv-~~g~~~~lhllPSGi~~~~~~~vIGnGvVvdp~ 79 (339)
T 2d7u_A 1 MPSVIVVGGQWGDEGKGSIVAYLSLHDEPEIIARGGVGTNAGHSVV-INGKKYAVRQIPTGFMQTKARLLIGAGVLVDPE 79 (339)
T ss_dssp CCCEEEEESSSSCSSHHHHHHHHHHHTCCSEEEECSSSSSCCEEEE-ETTEEEEESSSCTTTTCSSSBEEECTTSCBCHH
T ss_pred CceEEEEcCCcCCCCCceeEeeeccCCCCCEEEEcCccCCCCcEEE-ECCEEEEEEcCCccccCCCceEEECCcEEEcHH
Confidence 56679999999999999999999999 999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEcCCccccchhhHHhhHHHHHHhcCCcccccCCccchhhcccccCCCCeEEeCCCCCcH
Q 045536 92 GLFNEIDDLEANGVSCKGRILVSDRAHLLFDFHQEVDGLREAELVKSFIGTTRRGIGPAYSSKVIRSGIRVSDLRHMDTF 171 (438)
Q Consensus 92 ~l~~Ei~~L~~~g~~~~~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~iGTTg~GIGpay~dk~~R~gir~~DL~~~~~l 171 (438)
.|++||+.|+++|++ +||+||+||||+||||+++|+++|..+ ++||||||||||||+||++|+|||++||
T Consensus 80 ~l~~Ei~~L~~~Gv~--~rL~Is~ra~li~p~H~~~D~~~E~~~--~~iGTTgrGIGPay~dK~~R~giRv~Dl------ 149 (339)
T 2d7u_A 80 VFFHELEQLKDFNVK--DRVGIDYRCAIIEEKHKQLDRTNGYLH--GKIGTTGSGCGPANADRVMRKAKQAKDV------ 149 (339)
T ss_dssp HHHHHHHHTGGGTGG--GTEEEETTCBBCCHHHHC------------------CCHHHHHHHHTTTCSCBGGGC------
T ss_pred HHHHHHHHHHHCCCC--CCEEECCCccCCChhHHHHhHHhHHhh--ccCCCCCCCchHHHHHHHhccCccHHHH------
Confidence 999999999999976 799999999999999999999999987 6899999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCCcccChHHHHHHHHHCCCcEEEEeccccccccCCCcCCcc
Q 045536 172 PQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEPFVVDTVHFINESIAQKRKILVEGGQATMLDIDFGTYPFV 251 (438)
Q Consensus 172 ~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~V 251 (438)
++|+||++|+..+|++++++||+||||||||+|||+||||||||
T Consensus 150 ------------------------------------~~l~p~v~D~~~~l~~a~~~gk~vLfEGaQG~lLDid~GtYP~V 193 (339)
T 2d7u_A 150 ------------------------------------KELEPYLTDVAQEINDALDEGSLVLVEGTQGFGLSLYYGTYPYV 193 (339)
T ss_dssp ------------------------------------SSSSTTEECHHHHHHHHHHTTCCEEEEEEEEGGGCTTTSSTTSS
T ss_pred ------------------------------------HHHhccccCHHHHHHHHHHcCCeEEEEechHhhhhccCCcCCCc
Confidence 47889999999999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCCcccCcEEEEEeeccccccCCCCCCccCCcccchhhhcc-CCCCCCCCCCcccccchHHHHHH
Q 045536 252 TSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAG-QEFGTTTGRPRRCGWLDIVALKY 330 (438)
Q Consensus 252 TSS~t~a~~~~~g~G~~~~~i~~viGV~KAY~TRVG~GPfPTE~~~~~g~~lr~~g-~E~G~tTGR~RR~GwlDlv~lry 330 (438)
|||||+++++|+|+|++|+.|++||||+|||+||||+||||||+++|.+++ .| +|||+||||||||||||+|++||
T Consensus 194 TSSnt~a~g~~~g~Gi~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~---~G~~E~GttTGR~RRcGw~D~v~~ry 270 (339)
T 2d7u_A 194 TSKDVTASSVAADVGIGPTRVDEVIVVFKSFPTRVGAGPFPTEMPMEEADR---LGLVEYGTVTGRRRRVGWFDFEMARY 270 (339)
T ss_dssp CSSCCSHHHHHHHHTCCGGGCCEEEEEEESSCEECSSSCCTTBCCHHHHHH---TTCCCBCTTTCCBCEEBCCCHHHHHH
T ss_pred cCCCchhhhhhhccCCCccccCeEEEEEeeccceecCCCCCchhhhhhhhh---cCCCcccCcCCCCcccCcchHHHHHH
Confidence 999999999999999999999999999999999999999999999988887 89 99999999999999999999999
Q ss_pred HHHhcCcceeeeecccccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHH
Q 045536 331 CCQINGFSSLNLTKLDVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQ 410 (438)
Q Consensus 331 a~~ing~~~lalTklDvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~ 410 (438)
|+++||+|+|||||||+||+ +++++++|++||+|||+
T Consensus 271 a~~ing~t~lalTkLDvLd~-------------------------------------------~~~~~~~~~~LP~~a~~ 307 (339)
T 2d7u_A 271 SARINGATMLAVTMLDKYDK-------------------------------------------EAFGVTDYDKLPRKAKE 307 (339)
T ss_dssp HHHHTTCSEEEEECGGGTCG-------------------------------------------GGTTCCSGGGSCHHHHH
T ss_pred HHHhcCCCeEEEEcccccCC-------------------------------------------ccccceehHHCCHHHHH
Confidence 99999999999999999974 67889999999999999
Q ss_pred HHHHHHHHhCCCeEEEeeCCCcccccc
Q 045536 411 FVERIEELVGVPINYIGVGPGRDALIF 437 (438)
Q Consensus 411 yi~~iE~~~gvpi~~is~Gp~r~~~i~ 437 (438)
||++||+++|+||+|||+||+|+|||.
T Consensus 308 yi~~iEe~~gvpv~~is~GP~r~~ti~ 334 (339)
T 2d7u_A 308 FIEEIEERVGVPVGLIKTGPELEHIID 334 (339)
T ss_dssp HHHHHHHHHSSCEEEEECSSBSSCEEE
T ss_pred HHHHHHHHHCCCEEEEEeCCChHHeEE
Confidence 999999999999999999999999875
No 8
>1qp2_A Protein (PSAE protein); mainly beta, roll, pleckstrin topology, SH3-like, electron T; NMR {Nostoc SP} SCOP: b.34.4.2 PDB: 1qp3_A
Probab=34.23 E-value=10 Score=29.62 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=24.5
Q ss_pred CccCCchhhhhhhccCCcEEEEcCCCCCCCcE
Q 045536 24 WGDEGKGKLVDILAEHFDIVARCQGGANAGHT 55 (438)
Q Consensus 24 wGDEGKGkivD~La~~~d~VVRf~GG~NAGHT 55 (438)
|+++|+---||-=...+.++|||.+++=+|++
T Consensus 18 y~~vG~V~~Vd~~~~~ypV~VrFekvNy~g~~ 49 (70)
T 1qp2_A 18 FQDVGTVASVDQSGIKYPVIVRFEKVNYSGIN 49 (70)
T ss_dssp TTCEEEEEEECCSSCSCSEEEECSSCCSSCCS
T ss_pred ecceeEEEEEeCCCcEeeEEEEeccccccccc
Confidence 57777766666644478899999998888885
No 9
>1hyw_A GPW, head-TO-tail joining protein W; novel fold, two helices, one two-stranded beta-sheet, viral protein; NMR {Enterobacteria phage lambda} SCOP: d.186.1.1 PDB: 2l6q_A 2l6r_A
Probab=26.22 E-value=1.5e+02 Score=22.69 Aligned_cols=42 Identities=12% Similarity=0.312 Sum_probs=30.8
Q ss_pred cccCCCCCceEEEeeeecCCcccccCCCChhhhccCeEeEEEcCCCccccccccCCCCccHHHHHHHHHHHHHhCCC
Q 045536 346 DVLSELPEIQLGVAYKRVDGTPIKSFPADLVLLEQLKVEYEVLPGWQSDISSIRNYSDLPKAARQFVERIEELVGVP 422 (438)
Q Consensus 346 DvL~~~~~ikIc~~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~iE~~~gvp 422 (438)
|+++|=..+.| +| ||+.+.+-.+++ .+.++||+.||..+|..
T Consensus 16 ~L~tG~~~vsV--~y---dgr~V~Y~~asi------------------------------~~L~~~I~~le~~Lg~~ 57 (68)
T 1hyw_A 16 DLMTGKRVATV--QK---DGRRVEFTATSV------------------------------SDLKKYIAELEVQTGMT 57 (68)
T ss_dssp HHTTSCCCEEE--EC---SSCEEEECTTTH------------------------------HHHHHHHHHHHHHTTTT
T ss_pred HHhcCCceEEE--EE---CCEEEEEecCCH------------------------------HHHHHHHHHHHHHhccc
Confidence 66777666544 66 678777666553 47789999999999883
No 10
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=25.61 E-value=2e+02 Score=30.41 Aligned_cols=160 Identities=13% Similarity=0.150 Sum_probs=94.0
Q ss_pred eeEecCCeEechHHHHHHHHHHHHCCCCCC------CCeEEcCCccccchhhHHhhHHHHHHhcCCc----ccccCC-cc
Q 045536 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSCK------GRILVSDRAHLLFDFHQEVDGLREAELVKSF----IGTTRR-GI 147 (438)
Q Consensus 79 ~~~ig~GvVi~p~~l~~Ei~~L~~~g~~~~------~rL~Is~ra~vv~p~H~~~D~~~E~~~g~~~----iGTTg~-GI 147 (438)
+.+|.|+++|---+=.++.++|+++|+.-- +-+||-.+--|-=-|--.++..+ +..+..- +=|.|. |+
T Consensus 100 RVliaNsnlVp~wa~~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~r-k~~gg~L~G~~~lTaGLGGM 178 (557)
T 1uwk_A 100 RVLIANSNLVPHWANWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGR-QHYGGSLKGKWVLTAGLGGM 178 (557)
T ss_dssp SEEEEESCBCGGGCSHHHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHH-HHTSSCCTTCEEEEECCSTT
T ss_pred eEEEECCccCCCCCCHHHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHH-HhcCCCCCceEEEEecCCcc
Confidence 478999999977777889999999997521 45677775422111222222111 1111111 111222 22
Q ss_pred chh--hcccccCCCCeE-EeCCCCCcHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCC----cccChHHH
Q 045536 148 GPA--YSSKVIRSGIRV-SDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEP----FVVDTVHF 220 (438)
Q Consensus 148 Gpa--y~dk~~R~gir~-~DL~~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~i~d~~~~ 220 (438)
|=| -+-+++. ++-+ .| .|++.+++|+++ .. +.....++++.++...+..++=+| |+.+....
T Consensus 179 gGAQplA~~mag-~v~i~~E-vd~~ri~~R~~~------gy---ld~~~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv 247 (557)
T 1uwk_A 179 GGAQPLAATLAG-ACSLNIE-SQQSRIDFRLET------RY---VDEQATDLDDALVRIAKYTAEGKAISIALHGNAAEI 247 (557)
T ss_dssp TTHHHHHHHHTT-CEEEEEE-SCHHHHHHHHHT------TS---CCEECSSHHHHHHHHHHHHHTTCCCEEEEESCHHHH
T ss_pred chhhHHHHHHcC-ceEEEEE-ECHHHHHHHHhC------CC---ceeEcCCHHHHHHHHHHHHHcCCceEEEEeccHHHH
Confidence 322 2333332 3333 34 377777777664 11 122234588888877777666666 57788888
Q ss_pred HHHHHHCCCcEEEEeccccccccCCCcCCc
Q 045536 221 INESIAQKRKILVEGGQATMLDIDFGTYPF 250 (438)
Q Consensus 221 l~~al~~gk~ilfEGaQG~lLDid~GtYP~ 250 (438)
+.+.+++|-.+=+---|=..=|...|.||-
T Consensus 248 ~~~l~~~~i~~DlvtDQTSaHdp~~GY~P~ 277 (557)
T 1uwk_A 248 LPELVKRGVRPDMVTDQTSAHDPLNGYLPA 277 (557)
T ss_dssp HHHHHHHTCCCSEECCCSCTTCTTTSCCCT
T ss_pred HHHHHHCCCCCCCCCCCccccCcccccCCC
Confidence 888888876666667777777888888884
No 11
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=24.34 E-value=2e+02 Score=30.42 Aligned_cols=157 Identities=15% Similarity=0.179 Sum_probs=93.8
Q ss_pred eeEecCCeEechHHHHHHHHHHHHCCCCCC------CCeEEcCCccccchhhHHhhHHHHHHh---cCCc----ccccCC
Q 045536 79 VCVIGNGVVVHLPGLFNEIDDLEANGVSCK------GRILVSDRAHLLFDFHQEVDGLREAEL---VKSF----IGTTRR 145 (438)
Q Consensus 79 ~~~ig~GvVi~p~~l~~Ei~~L~~~g~~~~------~rL~Is~ra~vv~p~H~~~D~~~E~~~---g~~~----iGTTg~ 145 (438)
+.+|.|+++|---+=.++.++|+++|+.-- +-+||-.+- || |-...-+.+..| +..- +=|.|.
T Consensus 96 RVliaNsnlVp~wa~~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QG-Iv---qGTyeT~~~~~rk~~gg~L~G~~~lTaGL 171 (552)
T 2fkn_A 96 RVLLANSVLVPKWADWEHFHELEKKGLMMYGQMTAGSWIYIGSQG-IL---QGTYETFAELARQHFGGSLKGTLTLTAGL 171 (552)
T ss_dssp SEEEEESCBCGGGCSHHHHHHHHHTTCCCBCTTTTTTTCCCTTHH-HH---HHHHHHHHHHHHHHSSSCCTTCEEEEECC
T ss_pred eEEEECCccCCCCCCHHHHHHHHHcccccccCccccceeeecCcc-ee---ecHHHHHHHHHHHhcCCCCCceEEEEecC
Confidence 478999999977777889999999997521 456777754 32 222222233222 1111 111222
Q ss_pred -ccchh--hcccccCCCCeE-EeCCCCCcHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHhhCC----cccCh
Q 045536 146 -GIGPA--YSSKVIRSGIRV-SDLRHMDTFPQKLDFLLSNAAARFPGFKYTPHMLREEVEKYKRIAERLEP----FVVDT 217 (438)
Q Consensus 146 -GIGpa--y~dk~~R~gir~-~DL~~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~i~d~ 217 (438)
|+|=| -+-+++. ++-+ .| .|++.+++|+++ .. +.....++++.++...+..++=+| |+.+.
T Consensus 172 GGMgGAQplA~~mag-~v~i~~E-vd~~ri~~R~~~------gy---ld~~~~~ldeal~~~~~a~~~~~~~SIg~~GNa 240 (552)
T 2fkn_A 172 GGMGGAQPLSVTMNE-GVVIAVE-VDEKRIDKRIET------KY---CDRKTASIEEALAWAEEAKLAGKPLSIALLGNA 240 (552)
T ss_dssp STTTTHHHHHHHHTT-CEEEEEE-SCHHHHHHHHHT------TS---CSEEESCHHHHHHHHHHHHHTTCCEEEEEESCH
T ss_pred CccchhhHHHHHHcC-ceEEEEE-ECHHHHHHHHhC------Cc---ceeEcCCHHHHHHHHHHHHHcCCceEEEEeccH
Confidence 22322 2323332 3333 34 377777777664 11 122234588888877777666566 67788
Q ss_pred HHHHHHHHHCCCcEEEEeccccccccCCCcCCc
Q 045536 218 VHFINESIAQKRKILVEGGQATMLDIDFGTYPF 250 (438)
Q Consensus 218 ~~~l~~al~~gk~ilfEGaQG~lLDid~GtYP~ 250 (438)
...+.+.+++|-.+=+---|=..=|...|.||-
T Consensus 241 adv~~~l~~~~i~~DlvtDQTSaHdp~~GY~P~ 273 (552)
T 2fkn_A 241 AEVHHTLLNRGVKIDIVTDQTSAHDPLIGYVPE 273 (552)
T ss_dssp HHHHHHHHTTTCCCSEECCCSCTTCTTTTCCCT
T ss_pred HHHHHHHHHCCCCCCCCCCCccccCcccccCCC
Confidence 888888888876666667777777887788884
No 12
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=22.05 E-value=34 Score=31.30 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=25.7
Q ss_pred ccccC-CccchhhcccccCCCCeEEeCCCCCcHHHHHHHHH
Q 045536 140 IGTTR-RGIGPAYSSKVIRSGIRVSDLRHMDTFPQKLDFLL 179 (438)
Q Consensus 140 iGTTg-~GIGpay~dk~~R~gir~~DL~~~~~l~~kL~~~~ 179 (438)
.|.+| +|||.+.+....+.|-++.=+...+...+.++++.
T Consensus 13 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 53 (266)
T 3oig_A 13 MGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELA 53 (266)
T ss_dssp ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred EcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH
Confidence 46666 89999999888888887653322233444555444
No 13
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=21.01 E-value=38 Score=32.87 Aligned_cols=22 Identities=18% Similarity=0.436 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhCCCeEEEe
Q 045536 406 KAARQFVERIEELVGVPINYIG 427 (438)
Q Consensus 406 ~~a~~yi~~iE~~~gvpi~~is 427 (438)
.|.+.|++.|++.+|.+|.+||
T Consensus 89 ~N~~~fl~~i~~~tG~~i~vIs 110 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNIDVEVID 110 (315)
T ss_dssp TTHHHHHHHHHHHHCCCEEECC
T ss_pred cCHHHHHHHHHHHHCCCeEEeC
Confidence 5899999999999999999997
Done!