Query 045539
Match_columns 897
No_of_seqs 1023 out of 6039
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 04:50:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045539.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045539hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1E-75 3.5E-80 715.7 27.7 529 25-560 4-744 (768)
2 4eco_A Uncharacterized protein 100.0 6.8E-59 2.3E-63 554.4 21.9 457 31-534 28-601 (636)
3 4ecn_A Leucine-rich repeat pro 100.0 1.6E-58 5.5E-63 559.1 22.9 451 29-533 265-840 (876)
4 3rgz_A Protein brassinosteroid 100.0 8.1E-58 2.8E-62 557.9 19.7 455 76-535 200-743 (768)
5 3t6q_A CD180 antigen; protein- 100.0 1.9E-54 6.5E-59 516.2 21.7 478 76-558 33-562 (606)
6 1ziw_A TOLL-like receptor 3; i 100.0 2E-53 6.8E-58 514.4 24.4 483 76-558 25-624 (680)
7 3j0a_A TOLL-like receptor 5; m 100.0 5.5E-53 1.9E-57 520.6 23.9 481 64-557 14-561 (844)
8 3vq2_A TLR4, TOLL-like recepto 100.0 1.4E-52 4.8E-57 500.0 22.8 472 76-558 32-560 (606)
9 3t6q_A CD180 antigen; protein- 100.0 1E-51 3.4E-56 492.7 24.9 438 76-537 57-564 (606)
10 4asz_A BDNF/NT-3 growth factor 100.0 4.7E-52 1.6E-56 443.4 13.0 254 617-895 13-286 (299)
11 1ziw_A TOLL-like receptor 3; i 100.0 1.8E-50 6.3E-55 488.4 28.6 462 77-538 50-627 (680)
12 4aoj_A High affinity nerve gro 100.0 2.4E-51 8.3E-56 444.1 17.2 255 617-895 41-316 (329)
13 3omv_A RAF proto-oncogene seri 100.0 5.1E-51 1.7E-55 435.1 17.9 256 616-894 35-296 (307)
14 4gt4_A Tyrosine-protein kinase 100.0 4.8E-51 1.6E-55 437.6 14.2 254 617-895 26-303 (308)
15 2z81_A CD282 antigen, TOLL-lik 100.0 4.9E-51 1.7E-55 480.8 14.5 459 63-533 3-510 (549)
16 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.2E-51 2.5E-55 432.5 13.6 249 616-890 31-283 (311)
17 4fih_A Serine/threonine-protei 100.0 1.1E-50 3.7E-55 437.7 14.6 249 617-891 74-323 (346)
18 4b9d_A Serine/threonine-protei 100.0 8E-51 2.7E-55 439.5 13.5 250 616-891 23-276 (350)
19 3vq2_A TLR4, TOLL-like recepto 100.0 4.2E-50 1.4E-54 478.6 19.8 452 76-538 56-563 (606)
20 3j0a_A TOLL-like receptor 5; m 100.0 3.7E-49 1.3E-53 486.4 20.8 450 81-555 9-538 (844)
21 4fie_A Serine/threonine-protei 100.0 1.8E-49 6E-54 438.9 15.4 249 617-891 151-400 (423)
22 4g3f_A NF-kappa-beta-inducing 100.0 6.6E-50 2.3E-54 430.5 10.8 250 616-893 57-311 (336)
23 2z63_A TOLL-like receptor 4, v 100.0 9.3E-49 3.2E-53 463.7 21.8 459 76-558 28-533 (570)
24 3fpq_A Serine/threonine-protei 100.0 2.3E-48 7.9E-53 411.6 21.2 244 620-891 29-282 (290)
25 3hyh_A Carbon catabolite-derep 100.0 1.1E-48 3.7E-53 410.4 17.7 246 616-891 12-262 (275)
26 4eco_A Uncharacterized protein 100.0 5.1E-49 1.8E-53 469.2 16.7 421 100-559 81-603 (636)
27 3hmm_A TGF-beta receptor type- 100.0 8.8E-49 3E-53 421.4 15.0 272 617-894 3-293 (303)
28 4ase_A Vascular endothelial gr 100.0 3.6E-49 1.2E-53 430.5 11.1 265 607-894 54-343 (353)
29 2z63_A TOLL-like receptor 4, v 100.0 4.7E-48 1.6E-52 457.6 20.1 464 81-555 12-506 (570)
30 3ubd_A Ribosomal protein S6 ki 100.0 3E-49 1E-53 420.4 5.6 242 617-886 24-271 (304)
31 4g31_A Eukaryotic translation 100.0 4.5E-47 1.5E-51 405.8 18.8 250 616-891 4-279 (299)
32 4ecn_A Leucine-rich repeat pro 100.0 2.6E-47 8.9E-52 461.3 18.9 418 100-557 323-841 (876)
33 2z81_A CD282 antigen, TOLL-lik 100.0 1.1E-47 3.9E-52 452.1 15.2 444 81-558 10-512 (549)
34 2z7x_B TOLL-like receptor 1, v 100.0 9.5E-48 3.3E-52 449.4 10.7 448 80-558 4-483 (520)
35 2z7x_B TOLL-like receptor 1, v 100.0 7E-47 2.4E-51 442.1 10.3 415 76-537 21-485 (520)
36 4g8a_A TOLL-like receptor 4; l 100.0 2.4E-44 8.1E-49 431.6 23.2 471 77-558 53-582 (635)
37 3v47_A TOLL-like receptor 5B a 100.0 2.7E-44 9.4E-49 412.9 22.6 399 62-538 6-413 (455)
38 1ogq_A PGIP-2, polygalacturona 100.0 1.3E-44 4.6E-49 392.7 18.3 224 29-257 2-233 (313)
39 4b99_A Mitogen-activated prote 100.0 1.9E-44 6.5E-49 400.3 18.8 269 616-891 53-344 (398)
40 4f9c_A Cell division cycle 7-r 100.0 2E-44 6.7E-49 396.1 17.2 199 614-821 18-249 (361)
41 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.9E-44 2.7E-48 419.9 19.5 449 79-558 34-512 (562)
42 3uto_A Twitchin; kinase, muscl 100.0 8.5E-44 2.9E-48 414.9 18.2 252 616-891 156-410 (573)
43 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.1E-44 1.4E-48 422.3 12.6 431 76-537 52-514 (562)
44 3v5w_A G-protein coupled recep 100.0 8.4E-43 2.9E-47 402.0 20.0 249 616-891 188-449 (689)
45 4g8a_A TOLL-like receptor 4; l 100.0 8.2E-43 2.8E-47 418.3 20.8 450 77-535 77-582 (635)
46 3uim_A Brassinosteroid insensi 100.0 9.8E-43 3.3E-47 381.3 18.7 286 602-895 15-308 (326)
47 2qkw_B Protein kinase; three-h 100.0 5.7E-43 1.9E-47 382.2 14.3 280 605-894 27-311 (321)
48 1jl5_A Outer protein YOPM; leu 100.0 9.5E-43 3.2E-47 397.0 16.4 376 76-538 11-416 (454)
49 3v47_A TOLL-like receptor 5B a 100.0 2.7E-42 9.2E-47 396.3 17.9 388 56-513 9-412 (455)
50 1jl5_A Outer protein YOPM; leu 100.0 2.7E-42 9.1E-47 393.3 16.5 370 77-538 35-434 (454)
51 3fxz_A Serine/threonine-protei 100.0 1.6E-41 5.6E-46 365.9 17.5 250 616-891 19-269 (297)
52 3soc_A Activin receptor type-2 100.0 1.1E-41 3.7E-46 372.0 16.1 271 616-895 23-315 (322)
53 3s95_A LIMK-1, LIM domain kina 100.0 5.1E-41 1.8E-45 364.8 20.6 257 616-894 9-278 (310)
54 2nru_A Interleukin-1 receptor- 100.0 2.1E-40 7.3E-45 359.5 24.5 279 603-895 11-303 (307)
55 1tki_A Titin; serine kinase, m 100.0 6E-41 2E-45 365.4 19.0 251 616-891 4-257 (321)
56 2psq_A Fibroblast growth facto 100.0 4.8E-41 1.7E-45 373.6 17.1 256 616-895 80-361 (370)
57 3bz5_A Internalin-J, INLJ; leu 100.0 7.7E-41 2.6E-45 381.6 19.1 359 93-539 35-393 (457)
58 2c30_A Serine/threonine-protei 100.0 8.3E-41 2.9E-45 364.5 18.3 262 605-892 23-295 (321)
59 3fe3_A MAP/microtubule affinit 100.0 1.1E-40 3.7E-45 363.9 18.3 248 616-892 14-265 (328)
60 2yab_A Death-associated protei 100.0 2.2E-40 7.5E-45 365.8 19.9 252 615-891 10-272 (361)
61 3kul_A Ephrin type-A receptor 100.0 8.4E-41 2.9E-45 365.2 16.1 255 616-894 48-309 (325)
62 3tki_A Serine/threonine-protei 100.0 1.5E-40 5E-45 362.8 17.4 254 616-892 6-262 (323)
63 3p86_A Serine/threonine-protei 100.0 8.4E-41 2.9E-45 362.3 15.2 255 614-894 34-294 (309)
64 3zgw_A Maternal embryonic leuc 100.0 1E-40 3.5E-45 366.0 15.8 251 615-892 8-261 (347)
65 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.5E-40 5.3E-45 353.0 15.9 254 616-895 7-261 (268)
66 4eqm_A Protein kinase; transfe 100.0 1.8E-40 6.2E-45 357.3 16.6 258 616-895 10-272 (294)
67 4hcu_A Tyrosine-protein kinase 100.0 1E-40 3.6E-45 354.5 14.4 254 616-895 9-263 (269)
68 3cbl_A C-FES, proto-oncogene t 100.0 3.9E-41 1.3E-45 375.8 11.3 257 615-895 112-371 (377)
69 3c0i_A Peripheral plasma membr 100.0 3.1E-40 1.1E-44 364.7 18.2 252 616-891 23-286 (351)
70 3niz_A Rhodanese family protei 100.0 6.2E-40 2.1E-44 356.1 20.0 268 616-891 20-300 (311)
71 1kob_A Twitchin; kinase, intra 100.0 3.3E-40 1.1E-44 367.7 18.1 253 616-892 50-305 (387)
72 3ugc_A Tyrosine-protein kinase 100.0 4.3E-41 1.5E-45 362.7 10.6 270 616-895 9-288 (295)
73 2qol_A Ephrin receptor; recept 100.0 1.6E-40 5.4E-45 369.7 15.4 255 616-894 44-305 (373)
74 3soa_A Calcium/calmodulin-depe 100.0 3.8E-40 1.3E-44 373.5 18.4 255 614-892 8-268 (444)
75 2bdw_A Hypothetical protein K1 100.0 4.2E-40 1.4E-44 364.7 18.1 254 614-892 26-285 (362)
76 3vhe_A Vascular endothelial gr 100.0 1.5E-40 5E-45 369.3 14.2 269 604-895 9-352 (359)
77 2y0a_A Death-associated protei 100.0 6.5E-40 2.2E-44 358.3 19.0 252 616-892 10-272 (326)
78 1o6l_A RAC-beta serine/threoni 100.0 8.7E-40 3E-44 357.7 19.7 249 616-892 4-261 (337)
79 3v8s_A RHO-associated protein 100.0 1E-40 3.4E-45 373.8 12.1 259 610-892 62-330 (410)
80 3lb7_A RAF proto-oncogene seri 100.0 4.3E-40 1.5E-44 356.5 16.3 256 616-894 35-296 (307)
81 4aw2_A Serine/threonine-protei 100.0 6.4E-41 2.2E-45 378.3 9.9 262 609-891 66-338 (437)
82 1o6v_A Internalin A; bacterial 100.0 4.5E-39 1.5E-43 370.0 25.3 346 99-535 45-390 (466)
83 3tt0_A Basic fibroblast growth 100.0 5.5E-40 1.9E-44 367.3 16.1 255 616-894 68-348 (382)
84 3q4u_A Activin receptor type-1 100.0 1.2E-39 4.1E-44 352.5 18.2 263 616-895 7-299 (301)
85 1luf_A Muscle-specific tyrosin 100.0 4E-40 1.4E-44 363.4 14.4 258 614-895 44-332 (343)
86 2izr_A Casein kinase I isoform 100.0 6.3E-40 2.2E-44 359.5 15.6 257 616-894 8-277 (330)
87 3gen_A Tyrosine-protein kinase 100.0 3.1E-40 1.1E-44 353.7 12.7 254 615-894 22-276 (283)
88 3poz_A Epidermal growth factor 100.0 4E-40 1.4E-44 360.4 13.7 254 616-894 14-274 (327)
89 2x4f_A Myosin light chain kina 100.0 7E-40 2.4E-44 364.2 15.4 247 621-891 93-342 (373)
90 1t46_A HOMO sapiens V-KIT hard 100.0 8.4E-40 2.9E-44 355.8 15.7 257 616-895 22-304 (313)
91 2ivs_A Proto-oncogene tyrosine 100.0 8.6E-40 2.9E-44 355.9 15.6 256 616-895 22-308 (314)
92 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.7E-40 3E-44 360.1 15.6 249 615-891 21-280 (353)
93 3l9p_A Anaplastic lymphoma kin 100.0 2.3E-40 7.9E-45 367.9 11.1 255 616-894 70-341 (367)
94 2zv2_A Calcium/calmodulin-depe 100.0 1.1E-39 3.7E-44 352.3 15.9 249 616-891 12-292 (298)
95 1csn_A Casein kinase-1; phosph 100.0 1.8E-39 6.2E-44 350.5 17.4 259 616-894 9-279 (298)
96 2vd5_A DMPK protein; serine/th 100.0 4.9E-40 1.7E-44 368.5 13.3 261 609-891 53-327 (412)
97 1rjb_A FL cytokine receptor; k 100.0 9.7E-40 3.3E-44 360.4 15.4 257 615-894 43-330 (344)
98 3qd2_B Eukaryotic translation 100.0 2.7E-39 9.1E-44 354.9 18.8 252 615-892 4-326 (332)
99 1ob3_A PFPK5, cell division co 100.0 1E-39 3.6E-44 350.5 15.1 268 617-892 2-281 (288)
100 3f3z_A Calcium/calmodulin-depe 100.0 3.3E-39 1.1E-43 344.6 18.7 251 615-891 7-261 (277)
101 1fot_A TPK1 delta, CAMP-depend 100.0 4.1E-39 1.4E-43 349.8 19.6 245 616-891 5-258 (318)
102 3og7_A AKAP9-BRAF fusion prote 100.0 7.4E-40 2.5E-44 351.8 13.5 257 616-895 23-285 (289)
103 4euu_A Serine/threonine-protei 100.0 3.1E-39 1E-43 352.3 18.3 272 616-894 8-305 (319)
104 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.3E-40 2.5E-44 357.9 13.2 246 616-891 8-258 (336)
105 3ork_A Serine/threonine protei 100.0 4.7E-40 1.6E-44 357.3 11.6 254 616-891 11-273 (311)
106 2eva_A TAK1 kinase - TAB1 chim 100.0 3.5E-39 1.2E-43 349.6 18.4 250 616-894 7-259 (307)
107 3op5_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 361.6 15.6 264 616-894 34-325 (364)
108 1o6v_A Internalin A; bacterial 100.0 1.2E-38 4E-43 366.6 23.4 347 77-515 47-393 (466)
109 1xjd_A Protein kinase C, theta 100.0 1.8E-39 6E-44 356.3 15.8 249 614-890 14-268 (345)
110 3qup_A Tyrosine-protein kinase 100.0 1.1E-39 3.8E-44 356.5 14.1 256 615-894 21-294 (323)
111 3llt_A Serine/threonine kinase 100.0 3.5E-39 1.2E-43 358.2 18.0 211 601-821 19-261 (360)
112 3kn6_A Ribosomal protein S6 ki 100.0 3.2E-39 1.1E-43 352.5 17.4 250 622-891 16-270 (325)
113 2i1m_A Macrophage colony-stimu 100.0 7.5E-40 2.6E-44 359.5 12.4 260 613-895 42-323 (333)
114 3o0g_A Cell division protein k 100.0 2.6E-39 9E-44 348.1 16.3 268 617-891 2-282 (292)
115 3hko_A Calcium/calmodulin-depe 100.0 2.6E-39 9E-44 357.1 16.7 260 611-891 20-330 (345)
116 3p1a_A MYT1 kinase, membrane-a 100.0 1.4E-39 4.6E-44 353.5 14.0 246 616-892 56-305 (311)
117 1mp8_A Focal adhesion kinase 1 100.0 2.1E-39 7.2E-44 346.8 15.2 254 616-895 14-273 (281)
118 2w4o_A Calcium/calmodulin-depe 100.0 1.7E-39 5.9E-44 358.2 14.9 252 615-892 51-306 (349)
119 3dbq_A Dual specificity protei 100.0 2E-39 6.8E-44 357.4 15.1 252 616-892 8-274 (343)
120 2pvf_A Fibroblast growth facto 100.0 3.1E-39 1.1E-43 354.6 16.4 255 616-894 34-314 (334)
121 3lxl_A Tyrosine-protein kinase 100.0 8.5E-40 2.9E-44 358.0 11.9 267 616-894 22-299 (327)
122 3gni_B Strad alpha; kinase fol 100.0 8.2E-39 2.8E-43 359.1 20.1 272 616-892 24-334 (389)
123 3kk8_A Calcium/calmodulin depe 100.0 6.4E-39 2.2E-43 343.7 18.2 252 616-892 5-262 (284)
124 2yex_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 340.4 19.7 254 615-891 5-261 (276)
125 4fr4_A YANK1, serine/threonine 100.0 7.2E-39 2.4E-43 355.6 19.1 250 616-891 14-271 (384)
126 3t9t_A Tyrosine-protein kinase 100.0 1.2E-39 4.1E-44 345.9 12.3 254 616-895 7-261 (267)
127 3dtc_A Mitogen-activated prote 100.0 2.4E-39 8.4E-44 344.4 14.6 250 616-895 6-270 (271)
128 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.9E-39 2E-43 353.3 17.9 245 616-891 40-293 (350)
129 4e5w_A Tyrosine-protein kinase 100.0 8.6E-40 2.9E-44 353.8 11.0 270 616-895 20-299 (302)
130 2a2a_A Death-associated protei 100.0 7.1E-39 2.4E-43 349.7 18.2 252 616-892 11-273 (321)
131 1qcf_A Haematopoetic cell kina 100.0 6E-40 2E-44 375.2 10.0 257 612-895 183-441 (454)
132 1p4o_A Insulin-like growth fac 100.0 9.3E-40 3.2E-44 357.0 11.0 265 607-895 15-296 (322)
133 4f0f_A Serine/threonine-protei 100.0 9.9E-39 3.4E-43 342.8 18.8 252 616-895 18-286 (287)
134 3kex_A Receptor tyrosine-prote 100.0 8.5E-40 2.9E-44 357.6 10.5 254 616-894 12-272 (325)
135 2zmd_A Dual specificity protei 100.0 6.1E-39 2.1E-43 359.1 17.6 251 617-892 56-321 (390)
136 4dc2_A Protein kinase C IOTA t 100.0 5.3E-39 1.8E-43 357.8 17.0 252 616-886 51-307 (396)
137 2xir_A Vascular endothelial gr 100.0 2.9E-39 9.9E-44 352.1 14.5 266 606-894 16-306 (316)
138 2r5t_A Serine/threonine-protei 100.0 1.8E-39 6.1E-44 359.9 12.9 254 616-897 37-295 (373)
139 3a62_A Ribosomal protein S6 ki 100.0 7.4E-39 2.5E-43 350.1 17.3 248 616-891 16-276 (327)
140 2pmi_A Negative RE, cyclin-dep 100.0 6.8E-39 2.3E-43 349.0 16.9 258 616-891 4-293 (317)
141 3mdy_A Bone morphogenetic prot 100.0 1.1E-38 3.7E-43 351.0 18.3 265 611-895 31-328 (337)
142 1opk_A P150, C-ABL, proto-onco 100.0 2.7E-39 9.1E-44 373.3 14.1 255 615-895 218-475 (495)
143 3cok_A Serine/threonine-protei 100.0 8E-39 2.7E-43 341.8 16.5 249 616-891 10-262 (278)
144 3kfa_A Tyrosine-protein kinase 100.0 1.4E-39 4.6E-44 349.7 10.5 254 615-894 11-267 (288)
145 3oz6_A Mitogen-activated prote 100.0 2E-38 6.8E-43 355.7 20.3 271 614-892 6-329 (388)
146 3a8x_A Protein kinase C IOTA t 100.0 1.3E-38 4.6E-43 349.9 18.4 252 616-886 8-264 (345)
147 3n9x_A Phosphotransferase; mal 100.0 2.4E-38 8.3E-43 359.5 21.1 201 616-821 25-254 (432)
148 2i0e_A Protein kinase C-beta I 100.0 8.9E-39 3.1E-43 351.8 16.9 249 615-891 18-276 (353)
149 3lxp_A Non-receptor tyrosine-p 100.0 2.8E-39 9.7E-44 352.3 12.8 267 617-895 30-307 (318)
150 2ac3_A MAP kinase-interacting 100.0 5.2E-39 1.8E-43 350.1 14.9 269 616-892 11-296 (316)
151 3lzb_A Epidermal growth factor 100.0 2.7E-39 9.2E-44 353.6 12.2 254 616-894 14-274 (327)
152 3uc3_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 356.8 13.6 253 616-892 19-275 (361)
153 3kmu_A ILK, integrin-linked ki 100.0 6.2E-39 2.1E-43 341.1 14.5 249 616-895 9-267 (271)
154 1qpc_A LCK kinase; alpha beta 100.0 2.2E-39 7.7E-44 346.3 11.0 253 615-894 11-265 (279)
155 2y94_A 5'-AMP-activated protei 100.0 3.2E-38 1.1E-42 359.9 21.1 247 616-891 15-266 (476)
156 1k9a_A Carboxyl-terminal SRC k 100.0 8.2E-39 2.8E-43 365.1 16.2 247 616-894 192-441 (450)
157 2y7j_A Phosphorylase B kinase 100.0 2.6E-38 8.7E-43 351.1 19.7 258 609-891 86-359 (365)
158 2h34_A Serine/threonine-protei 100.0 8.5E-39 2.9E-43 347.0 15.3 256 616-895 33-293 (309)
159 4fvq_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 346.4 12.3 249 616-895 7-272 (289)
160 3cc6_A Protein tyrosine kinase 100.0 8.7E-39 3E-43 342.1 15.1 253 616-894 11-269 (281)
161 3gxj_A TGF-beta receptor type- 100.0 3.5E-40 1.2E-44 357.0 4.2 261 616-895 2-294 (303)
162 2v62_A Serine/threonine-protei 100.0 4.8E-39 1.6E-43 354.6 13.4 261 616-895 36-325 (345)
163 2eue_A Carbon catabolite derep 100.0 1.8E-38 6.1E-43 338.5 17.3 246 616-891 12-262 (275)
164 1u59_A Tyrosine-protein kinase 100.0 1.1E-38 3.7E-43 342.5 15.6 254 616-894 8-268 (287)
165 1mqb_A Ephrin type-A receptor 100.0 1.6E-38 5.4E-43 348.6 16.9 254 617-894 44-305 (333)
166 3fdn_A Serine/threonine-protei 100.0 2.5E-38 8.7E-43 338.1 18.0 247 616-892 8-258 (279)
167 1u5q_A Serine/threonine protei 100.0 1E-38 3.5E-43 351.5 15.3 247 616-892 53-306 (348)
168 3bhy_A Death-associated protei 100.0 2.2E-38 7.4E-43 339.3 17.4 251 616-891 4-265 (283)
169 2jam_A Calcium/calmodulin-depe 100.0 1.4E-38 4.7E-43 344.7 15.8 251 615-891 7-261 (304)
170 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5E-39 1.7E-43 367.2 13.0 254 615-895 182-437 (452)
171 3brb_A Proto-oncogene tyrosine 100.0 1.7E-38 5.9E-43 345.5 16.6 258 614-895 31-305 (313)
172 4agu_A Cyclin-dependent kinase 100.0 3.2E-38 1.1E-42 343.0 18.7 268 616-892 2-285 (311)
173 1b6c_B TGF-B superfamily recep 100.0 4.6E-38 1.6E-42 346.7 20.1 272 607-894 32-332 (342)
174 2buj_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 347.7 15.0 258 616-895 28-303 (317)
175 3g33_A Cell division protein k 100.0 1.9E-38 6.5E-43 344.2 16.6 269 615-892 7-297 (308)
176 3oja_B Anopheles plasmodium-re 100.0 1.2E-38 4.1E-43 377.6 16.4 370 55-559 10-383 (597)
177 3o6n_A APL1; leucine-rich repe 100.0 1.5E-38 5E-43 357.2 16.2 372 55-558 4-376 (390)
178 3g2f_A Bone morphogenetic prot 100.0 6.5E-39 2.2E-43 352.6 13.0 272 616-895 12-315 (336)
179 4hgt_A Casein kinase I isoform 100.0 2E-38 6.8E-43 342.0 16.4 262 614-895 6-277 (296)
180 3f66_A Hepatocyte growth facto 100.0 2E-38 6.9E-43 342.3 16.3 256 616-895 24-288 (298)
181 3is5_A Calcium-dependent prote 100.0 1.2E-38 4.2E-43 341.5 14.5 250 616-891 21-278 (285)
182 3mtl_A Cell division protein k 100.0 5E-39 1.7E-43 351.2 11.6 266 617-891 2-281 (324)
183 3ttj_A Mitogen-activated prote 100.0 4.1E-38 1.4E-42 359.8 19.4 265 616-892 61-356 (464)
184 3i6u_A CDS1, serine/threonine- 100.0 2.4E-38 8.1E-43 357.9 17.0 254 614-892 132-400 (419)
185 3bz5_A Internalin-J, INLJ; leu 100.0 8.6E-38 2.9E-42 356.4 21.8 346 76-517 42-395 (457)
186 2qr7_A Ribosomal protein S6 ki 100.0 3.9E-39 1.3E-43 353.8 10.3 252 615-891 20-277 (342)
187 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.7E-38 9.2E-43 351.6 17.1 248 615-894 63-335 (365)
188 3rp9_A Mitogen-activated prote 100.0 3.7E-38 1.3E-42 361.5 18.6 195 616-815 52-280 (458)
189 3pls_A Macrophage-stimulating 100.0 2.4E-38 8.1E-43 341.7 15.9 255 618-895 22-284 (298)
190 1nxk_A MAP kinase-activated pr 100.0 1.6E-38 5.6E-43 356.7 15.1 251 616-892 60-322 (400)
191 2w1i_A JAK2; chromosomal rearr 100.0 5.3E-39 1.8E-43 351.5 10.9 267 616-895 40-319 (326)
192 2wqm_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 345.1 14.6 257 615-894 30-293 (310)
193 3mwu_A Calmodulin-domain prote 100.0 2.9E-38 1E-42 364.9 17.3 252 615-892 20-277 (486)
194 3q5i_A Protein kinase; CDPK, m 100.0 6.5E-38 2.2E-42 363.5 20.3 251 615-891 34-301 (504)
195 3dls_A PAS domain-containing s 100.0 9.6E-39 3.3E-43 350.2 12.6 243 615-892 22-275 (335)
196 3uzp_A CKI-delta, CKID, casein 100.0 3.5E-38 1.2E-42 340.0 16.7 259 616-894 8-276 (296)
197 4eut_A Serine/threonine-protei 100.0 7.5E-39 2.6E-43 359.7 11.8 271 616-894 8-305 (396)
198 2id5_A Lingo-1, leucine rich r 100.0 4E-38 1.4E-42 363.7 17.8 346 103-559 14-359 (477)
199 2yfx_A Tyrosine-protein kinase 100.0 1.6E-38 5.4E-43 348.0 13.7 255 616-894 29-300 (327)
200 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.5E-38 8.7E-43 364.6 15.9 248 616-886 184-438 (543)
201 3c1x_A Hepatocyte growth facto 100.0 1.1E-38 3.8E-43 354.3 12.5 253 618-894 90-351 (373)
202 2acx_A G protein-coupled recep 100.0 3E-38 1E-42 364.5 16.3 252 616-891 183-444 (576)
203 4ejn_A RAC-alpha serine/threon 100.0 1.7E-38 5.9E-43 362.7 13.8 248 616-891 147-404 (446)
204 1xbb_A Tyrosine-protein kinase 100.0 1.5E-38 5.1E-43 342.1 12.3 255 615-895 14-276 (291)
205 2rku_A Serine/threonine-protei 100.0 8.7E-38 3E-42 336.7 18.3 249 616-892 14-266 (294)
206 3lm5_A Serine/threonine-protei 100.0 2.4E-38 8.2E-43 346.3 14.1 259 610-892 21-288 (327)
207 2j7t_A Serine/threonine-protei 100.0 1.4E-38 5E-43 344.2 12.2 253 615-891 17-275 (302)
208 3nsz_A CK II alpha, casein kin 100.0 6.3E-38 2.1E-42 343.8 17.3 263 616-892 35-320 (330)
209 1ua2_A CAK, cell division prot 100.0 2.6E-38 9E-43 348.9 14.3 271 614-892 7-292 (346)
210 1cm8_A Phosphorylated MAP kina 100.0 5.4E-38 1.8E-42 348.6 16.5 260 616-891 24-307 (367)
211 3lij_A Calcium/calmodulin depe 100.0 4.3E-38 1.5E-42 364.1 16.3 250 616-891 36-291 (494)
212 3pg1_A Mitogen-activated prote 100.0 1.1E-37 3.6E-42 346.6 18.8 277 607-892 12-317 (362)
213 1t4h_A Serine/threonine-protei 100.0 2.6E-37 8.7E-42 332.3 20.9 247 617-891 26-282 (290)
214 3nyv_A Calmodulin-domain prote 100.0 2.1E-38 7.3E-43 366.2 13.4 250 616-891 25-281 (484)
215 2vgo_A Serine/threonine-protei 100.0 1.4E-37 4.8E-42 333.2 18.7 246 616-891 13-262 (284)
216 1x8b_A WEE1HU, WEE1-like prote 100.0 8.2E-38 2.8E-42 335.7 16.7 245 615-892 9-280 (289)
217 4aaa_A Cyclin-dependent kinase 100.0 7.5E-38 2.5E-42 343.2 16.6 267 616-891 24-306 (331)
218 2owb_A Serine/threonine-protei 100.0 9.5E-38 3.3E-42 342.8 17.0 249 616-892 40-292 (335)
219 3ll6_A Cyclin G-associated kin 100.0 2E-38 6.9E-43 348.7 11.7 252 615-894 26-304 (337)
220 1phk_A Phosphorylase kinase; g 100.0 9.6E-38 3.3E-42 337.0 16.6 252 615-891 15-283 (298)
221 2jii_A Serine/threonine-protei 100.0 1.3E-38 4.6E-43 352.2 10.0 259 616-894 41-332 (352)
222 3a7i_A MST3 kinase, serine/thr 100.0 1.4E-37 4.7E-42 336.7 17.7 249 616-892 21-271 (303)
223 2h6d_A 5'-AMP-activated protei 100.0 2E-37 6.8E-42 330.6 18.6 248 616-892 10-262 (276)
224 2wtk_C Serine/threonine-protei 100.0 3.1E-37 1.1E-41 334.2 20.3 252 615-892 3-264 (305)
225 3com_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42 341.6 14.4 251 615-891 27-278 (314)
226 2h8h_A Proto-oncogene tyrosine 100.0 1.7E-38 5.9E-43 370.0 10.9 255 614-895 264-520 (535)
227 3fme_A Dual specificity mitoge 100.0 1E-37 3.5E-42 335.3 16.1 250 616-891 6-266 (290)
228 2ozo_A Tyrosine-protein kinase 100.0 5.4E-38 1.9E-42 370.9 15.3 253 618-895 336-595 (613)
229 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.8E-38 2.7E-42 342.5 15.3 267 614-891 31-318 (329)
230 2clq_A Mitogen-activated prote 100.0 1.7E-37 5.8E-42 334.6 17.6 250 618-891 23-278 (295)
231 2fst_X Mitogen-activated prote 100.0 7.8E-38 2.7E-42 346.9 15.4 263 616-892 28-312 (367)
232 1u46_A ACK-1, activated CDC42 100.0 1.7E-38 5.7E-43 341.7 9.7 256 616-895 17-281 (291)
233 1byg_A CSK, protein (C-termina 100.0 2.7E-38 9.3E-43 337.7 11.1 248 616-895 20-270 (278)
234 2w5a_A Serine/threonine-protei 100.0 3E-38 1E-42 337.5 11.4 253 616-894 5-270 (279)
235 3mi9_A Cell division protein k 100.0 6.1E-38 2.1E-42 346.9 14.2 270 616-892 16-312 (351)
236 3sv0_A Casein kinase I-like; t 100.0 1.5E-37 5E-42 355.1 17.5 259 616-894 6-274 (483)
237 3byv_A Rhoptry kinase; malaria 100.0 1.1E-38 3.8E-43 356.1 8.0 240 616-891 72-359 (377)
238 3eqc_A Dual specificity mitoge 100.0 4.1E-38 1.4E-42 349.6 12.6 263 616-891 32-324 (360)
239 1fvr_A Tyrosine-protein kinase 100.0 5E-38 1.7E-42 344.0 13.0 252 616-894 24-296 (327)
240 2vwi_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 340.7 12.1 262 615-891 13-287 (303)
241 2id5_A Lingo-1, leucine rich r 100.0 1.8E-37 6.3E-42 358.1 17.9 313 86-448 21-333 (477)
242 3qyz_A Mitogen-activated prote 100.0 1.2E-37 3.9E-42 346.3 15.6 269 614-891 24-313 (364)
243 2ycf_A Serine/threonine-protei 100.0 1.2E-37 4.2E-42 340.1 15.2 252 615-891 8-274 (322)
244 2a19_B Interferon-induced, dou 100.0 6.4E-38 2.2E-42 335.8 12.6 244 615-894 9-270 (284)
245 2xrw_A Mitogen-activated prote 100.0 4.4E-37 1.5E-41 342.3 19.5 262 616-892 24-319 (371)
246 2i6l_A Mitogen-activated prote 100.0 2.5E-37 8.6E-42 337.3 17.1 267 616-891 10-305 (320)
247 3cek_A Dual specificity protei 100.0 2E-37 7E-42 336.9 15.6 261 607-892 18-293 (313)
248 2pml_X PFPK7, Ser/Thr protein 100.0 2.7E-37 9.4E-42 341.4 16.5 263 616-891 30-322 (348)
249 3pfq_A PKC-B, PKC-beta, protei 100.0 2.8E-37 9.5E-42 368.1 17.7 244 615-886 339-587 (674)
250 4exu_A Mitogen-activated prote 100.0 5.3E-37 1.8E-41 341.6 18.8 263 616-892 41-324 (371)
251 3kvw_A DYRK2, dual specificity 100.0 4.4E-37 1.5E-41 348.4 18.4 197 616-822 96-302 (429)
252 1zy4_A Serine/threonine-protei 100.0 2.1E-37 7.1E-42 335.1 14.7 254 615-892 4-284 (303)
253 4fl3_A Tyrosine-protein kinase 100.0 1.5E-37 5.2E-42 367.8 14.9 247 623-895 375-628 (635)
254 1vzo_A Ribosomal protein S6 ki 100.0 5.9E-38 2E-42 347.0 10.6 254 616-892 53-322 (355)
255 2r3i_A Cell division protein k 100.0 3.6E-37 1.2E-41 332.7 16.5 268 616-891 2-283 (299)
256 2vx3_A Dual specificity tyrosi 100.0 7.8E-37 2.7E-41 341.8 19.6 200 614-821 51-260 (382)
257 3an0_A Dual specificity mitoge 100.0 2.1E-37 7.1E-42 341.1 14.0 251 615-891 49-310 (340)
258 1wak_A Serine/threonine-protei 100.0 8.6E-37 2.9E-41 343.8 19.2 257 616-891 36-391 (397)
259 1z57_A Dual specificity protei 100.0 1.2E-36 4.1E-41 334.8 19.8 265 616-892 13-329 (339)
260 3q60_A ROP5B; pseudokinase, tr 100.0 1.1E-37 3.8E-42 347.3 11.6 254 616-891 61-352 (371)
261 2wei_A Calmodulin-domain prote 100.0 2.8E-37 9.5E-42 331.4 14.1 251 615-891 20-276 (287)
262 3eb0_A Putative uncharacterize 100.0 5.3E-37 1.8E-41 343.3 17.0 264 613-891 3-321 (383)
263 2x7f_A TRAF2 and NCK-interacti 100.0 8E-38 2.7E-42 342.3 10.1 261 605-891 12-286 (326)
264 2b9h_A MAP kinase FUS3, mitoge 100.0 6.5E-37 2.2E-41 339.0 16.7 268 616-891 10-305 (353)
265 3e3p_A Protein kinase, putativ 100.0 2.7E-36 9.4E-41 335.0 19.4 274 610-891 16-314 (360)
266 3rgf_A Cyclin-dependent kinase 100.0 1.6E-36 5.4E-41 342.1 17.2 200 616-821 19-238 (405)
267 3coi_A Mitogen-activated prote 100.0 1.8E-36 6.1E-41 335.4 17.1 263 616-892 23-306 (353)
268 2j0j_A Focal adhesion kinase 1 100.0 7.2E-37 2.5E-41 363.4 14.6 254 615-894 388-647 (656)
269 4e7w_A Glycogen synthase kinas 100.0 1.3E-36 4.4E-41 340.9 15.5 265 616-892 39-322 (394)
270 1j1b_A Glycogen synthase kinas 100.0 1.7E-36 5.9E-41 342.7 16.6 263 616-891 53-336 (420)
271 2eu9_A Dual specificity protei 100.0 3.2E-36 1.1E-40 333.7 18.0 264 616-891 18-333 (355)
272 2y4i_B KSR2, HKSR2, kinase sup 100.0 9.6E-38 3.3E-42 340.5 5.6 258 612-895 28-299 (319)
273 3fhr_A MAP kinase-activated pr 100.0 1.3E-36 4.4E-41 333.7 13.0 252 615-891 26-287 (336)
274 1blx_A Cyclin-dependent kinase 100.0 4.5E-36 1.5E-40 328.4 16.6 266 614-891 8-296 (326)
275 2rio_A Serine/threonine-protei 100.0 2.7E-36 9.1E-41 342.7 15.3 251 617-891 15-295 (434)
276 3p23_A Serine/threonine-protei 100.0 2E-36 6.8E-41 342.6 13.6 250 616-891 23-283 (432)
277 3aln_A Dual specificity mitoge 100.0 2.1E-36 7E-41 331.2 13.0 253 616-891 21-285 (327)
278 1q8y_A SR protein kinase; tran 100.0 6.8E-36 2.3E-40 333.5 16.7 265 616-891 18-333 (373)
279 2iwi_A Serine/threonine-protei 100.0 2.1E-36 7.1E-41 328.8 12.0 246 611-892 25-284 (312)
280 2dyl_A Dual specificity mitoge 100.0 2.7E-36 9.2E-41 328.9 12.9 251 616-891 24-283 (318)
281 3a99_A Proto-oncogene serine/t 100.0 1.1E-36 3.9E-41 331.9 9.3 246 611-892 37-294 (320)
282 4fcg_A Uncharacterized protein 100.0 1.5E-35 5.2E-40 323.4 16.0 280 29-376 23-314 (328)
283 3qa8_A MGC80376 protein; kinas 100.0 5.8E-36 2E-40 348.4 11.3 264 616-890 13-296 (676)
284 4fmz_A Internalin; leucine ric 100.0 2.6E-34 8.8E-39 317.3 21.1 306 97-509 41-346 (347)
285 4fmz_A Internalin; leucine ric 100.0 2.3E-34 7.7E-39 317.8 20.2 307 120-533 40-346 (347)
286 3uqc_A Probable conserved tran 100.0 3.4E-35 1.2E-39 314.2 12.9 227 616-895 30-262 (286)
287 1ogq_A PGIP-2, polygalacturona 100.0 7.7E-36 2.6E-40 323.8 7.8 256 290-561 50-309 (313)
288 3oja_B Anopheles plasmodium-re 100.0 1.4E-34 4.6E-39 342.9 18.9 309 77-487 52-360 (597)
289 3o6n_A APL1; leucine-rich repe 100.0 1.5E-34 5E-39 324.6 17.3 308 77-486 46-353 (390)
290 3m2w_A MAP kinase-activated pr 100.0 1.8E-34 6.2E-39 311.4 15.7 230 616-891 16-256 (299)
291 2pzi_A Probable serine/threoni 100.0 1.1E-34 3.8E-39 348.3 14.8 236 616-893 79-323 (681)
292 2vuw_A Serine/threonine-protei 100.0 9.6E-35 3.3E-39 319.1 8.7 242 616-890 19-329 (336)
293 3dzo_A Rhoptry kinase domain; 100.0 1.1E-34 3.9E-39 327.1 9.5 240 616-891 77-363 (413)
294 2ft3_A Biglycan; proteoglycan, 100.0 9.2E-33 3.1E-37 302.7 19.3 294 101-507 34-331 (332)
295 2ft3_A Biglycan; proteoglycan, 100.0 1.1E-32 3.6E-37 302.2 19.5 288 197-531 34-331 (332)
296 1xku_A Decorin; proteoglycan, 100.0 3.4E-32 1.2E-36 298.0 21.1 252 100-432 31-284 (330)
297 1xku_A Decorin; proteoglycan, 100.0 3.4E-32 1.1E-36 298.0 19.8 270 64-424 31-306 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.1E-36 3.8E-41 350.1 -18.0 287 101-425 4-327 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 2E-35 6.9E-40 339.7 -9.8 360 124-535 3-413 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 2.9E-32 9.9E-37 301.5 11.7 294 57-428 23-318 (353)
301 2z66_A Variable lymphocyte rec 100.0 1.5E-30 5.3E-35 281.6 16.4 283 64-409 7-296 (306)
302 3g06_A SSPH2 (leucine-rich rep 100.0 1.6E-30 5.4E-35 304.9 12.9 293 51-435 10-308 (622)
303 4fcg_A Uncharacterized protein 100.0 4.4E-32 1.5E-36 296.0 -1.3 289 42-424 22-314 (328)
304 2z80_A TOLL-like receptor 2, v 100.0 3.3E-30 1.1E-34 285.0 12.3 277 100-448 31-314 (353)
305 3ogk_B Coronatine-insensitive 100.0 2.9E-33 1E-37 332.3 -15.4 434 63-535 41-528 (592)
306 1wwl_A Monocyte differentiatio 100.0 3.1E-31 1.1E-35 287.6 0.6 251 98-401 41-310 (312)
307 2z66_A Variable lymphocyte rec 100.0 1.7E-29 5.9E-34 273.4 14.3 276 199-538 10-292 (306)
308 3zyi_A Leucine-rich repeat-con 100.0 5.9E-29 2E-33 284.5 17.7 173 85-262 63-235 (452)
309 3zyj_A Leucine-rich repeat-con 100.0 2.5E-28 8.4E-33 278.3 20.2 174 84-262 51-224 (440)
310 1wwl_A Monocyte differentiatio 100.0 1.5E-30 5E-35 282.3 1.1 256 118-425 37-310 (312)
311 3oja_A Leucine-rich immune mol 100.0 1.3E-29 4.3E-34 291.6 8.8 148 364-528 121-270 (487)
312 1ozn_A Reticulon 4 receptor; N 100.0 1.9E-28 6.5E-33 262.2 16.6 179 79-261 14-193 (285)
313 3zyi_A Leucine-rich repeat-con 100.0 2.1E-28 7E-33 280.0 16.4 246 103-424 57-303 (452)
314 1ozn_A Reticulon 4 receptor; N 100.0 2.5E-28 8.4E-33 261.4 15.9 255 103-408 14-269 (285)
315 3zyj_A Leucine-rich repeat-con 100.0 2.6E-28 8.9E-33 278.1 16.1 246 103-424 46-292 (440)
316 3o53_A Protein LRIM1, AGAP0063 100.0 6.4E-30 2.2E-34 277.9 2.5 256 104-419 14-270 (317)
317 3o53_A Protein LRIM1, AGAP0063 100.0 4.4E-29 1.5E-33 271.3 7.7 161 338-539 119-282 (317)
318 3ogk_B Coronatine-insensitive 100.0 1.1E-31 3.7E-36 318.8 -14.2 415 77-529 74-547 (592)
319 3g06_A SSPH2 (leucine-rich rep 100.0 1.1E-27 3.8E-32 280.8 20.0 149 339-521 161-309 (622)
320 4azs_A Methyltransferase WBDD; 99.9 2.5E-29 8.4E-34 293.1 3.4 186 624-819 241-438 (569)
321 2o6q_A Variable lymphocyte rec 99.9 2.2E-27 7.4E-32 251.7 15.3 220 61-306 2-221 (270)
322 3oja_A Leucine-rich immune mol 99.9 1.3E-27 4.5E-32 274.8 10.1 238 98-419 32-270 (487)
323 2p1m_B Transport inhibitor res 99.9 1.4E-30 5E-35 309.3 -16.6 187 63-255 34-245 (594)
324 2z62_A TOLL-like receptor 4, v 99.9 1.7E-25 5.7E-30 238.1 10.5 208 316-537 29-241 (276)
325 2p1m_B Transport inhibitor res 99.9 7.5E-29 2.6E-33 294.5 -18.0 382 77-508 67-518 (594)
326 2z62_A TOLL-like receptor 4, v 99.9 7.2E-25 2.5E-29 233.2 14.4 220 156-425 15-238 (276)
327 3m19_A Variable lymphocyte rec 99.9 6.3E-25 2.1E-29 230.0 12.8 193 62-261 3-195 (251)
328 3rfs_A Internalin B, repeat mo 99.9 2.6E-25 8.9E-30 235.9 9.7 159 360-538 82-240 (272)
329 2o6q_A Variable lymphocyte rec 99.9 4.1E-24 1.4E-28 226.5 18.2 205 290-535 16-220 (270)
330 3en9_A Glycoprotease, O-sialog 99.9 2.1E-25 7.3E-30 258.5 9.1 188 618-820 337-539 (540)
331 1p9a_G Platelet glycoprotein I 99.9 3E-24 1E-28 229.5 15.8 203 286-533 6-208 (290)
332 3rfs_A Internalin B, repeat mo 99.9 3.8E-24 1.3E-28 226.9 14.8 211 96-340 37-247 (272)
333 2xwt_C Thyrotropin receptor; s 99.9 5.3E-24 1.8E-28 221.3 15.5 198 76-301 31-237 (239)
334 3goz_A Leucine-rich repeat-con 99.9 3.4E-26 1.2E-30 253.4 -1.9 130 81-210 3-152 (362)
335 3goz_A Leucine-rich repeat-con 99.9 1.6E-25 5.5E-30 248.0 1.4 270 104-428 2-301 (362)
336 1p9a_G Platelet glycoprotein I 99.9 8.8E-24 3E-28 225.9 14.7 205 335-558 6-210 (290)
337 2ca6_A RAN GTPase-activating p 99.9 1.1E-25 3.9E-30 251.8 -2.1 257 236-536 23-319 (386)
338 2ast_B S-phase kinase-associat 99.9 1.5E-25 5E-30 245.9 -2.1 189 61-256 34-233 (336)
339 2ca6_A RAN GTPase-activating p 99.9 1.9E-25 6.5E-30 250.0 -4.8 94 334-427 211-319 (386)
340 2xwt_C Thyrotropin receptor; s 99.9 6.8E-23 2.3E-27 212.9 13.5 187 91-305 25-220 (239)
341 4glp_A Monocyte differentiatio 99.9 3.2E-23 1.1E-27 224.3 11.2 158 100-258 91-264 (310)
342 3m19_A Variable lymphocyte rec 99.9 1.5E-22 5.1E-27 211.9 15.2 183 339-537 14-196 (251)
343 4glp_A Monocyte differentiatio 99.9 5.9E-23 2E-27 222.2 12.6 190 339-533 91-307 (310)
344 2ast_B S-phase kinase-associat 99.9 4.8E-24 1.7E-28 233.8 2.6 149 102-255 49-205 (336)
345 4ay9_X Follicle-stimulating ho 99.9 2.8E-22 9.7E-27 220.7 14.9 125 64-203 9-135 (350)
346 4ay9_X Follicle-stimulating ho 99.9 8.7E-23 3E-27 224.8 10.4 241 151-445 12-256 (350)
347 3cvr_A Invasion plasmid antige 99.9 4.2E-23 1.4E-27 238.9 7.3 205 56-312 35-252 (571)
348 1h6u_A Internalin H; cell adhe 99.9 3.1E-22 1.1E-26 216.0 13.3 196 286-535 37-232 (308)
349 1h6u_A Internalin H; cell adhe 99.9 4E-22 1.4E-26 215.2 13.9 212 172-448 19-230 (308)
350 2o6s_A Variable lymphocyte rec 99.9 2.1E-22 7.1E-27 204.3 11.0 183 63-268 6-188 (208)
351 1zar_A RIO2 kinase; serine kin 99.9 1.7E-22 6E-27 214.4 9.7 153 609-792 82-252 (282)
352 2o6s_A Variable lymphocyte rec 99.8 1.2E-20 4E-25 191.4 14.2 181 103-340 10-190 (208)
353 3cvr_A Invasion plasmid antige 99.8 2.6E-21 9E-26 223.9 10.0 190 290-521 59-255 (571)
354 3e6j_A Variable lymphocyte rec 99.8 1.2E-20 4E-25 194.3 13.2 162 56-234 11-172 (229)
355 4b8c_D Glucose-repressible alc 99.8 1.2E-21 4.2E-26 235.3 5.6 240 30-349 129-369 (727)
356 1m9s_A Internalin B; cell inva 99.8 2.1E-20 7.3E-25 218.8 12.1 193 171-426 20-212 (605)
357 1h6t_A Internalin B; cell adhe 99.8 5.5E-20 1.9E-24 196.6 12.1 191 316-535 25-215 (291)
358 1dce_A Protein (RAB geranylger 99.8 4.8E-22 1.6E-26 231.5 -4.6 233 65-378 286-548 (567)
359 2v9t_B SLIT homolog 2 protein 99.8 1.3E-19 4.5E-24 185.0 11.0 154 64-233 11-164 (220)
360 2xot_A Amphoterin-induced prot 99.8 7.1E-20 2.4E-24 202.4 9.7 176 80-259 22-203 (361)
361 1h6t_A Internalin B; cell adhe 99.8 1.1E-19 3.6E-24 194.3 10.2 192 171-425 23-214 (291)
362 1dce_A Protein (RAB geranylger 99.8 2.6E-21 8.8E-26 225.4 -2.6 104 335-441 459-566 (567)
363 2xot_A Amphoterin-induced prot 99.8 1.1E-19 3.7E-24 200.9 10.6 176 342-533 21-202 (361)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 1.8E-19 6.1E-24 184.1 10.8 153 342-534 14-167 (220)
365 1m9s_A Internalin B; cell inva 99.8 3.2E-19 1.1E-23 208.9 12.9 192 316-536 22-213 (605)
366 2v9t_B SLIT homolog 2 protein 99.8 4.1E-19 1.4E-23 181.4 11.1 153 103-259 14-166 (220)
367 2v70_A SLIT-2, SLIT homolog 2 99.8 5E-19 1.7E-23 180.8 11.3 156 318-513 14-170 (220)
368 4b8c_D Glucose-repressible alc 99.8 1.3E-19 4.6E-24 217.6 6.5 208 292-538 193-409 (727)
369 3e6j_A Variable lymphocyte rec 99.8 1.1E-18 3.9E-23 179.3 11.9 153 341-534 21-173 (229)
370 1xeu_A Internalin C; cellular 99.8 1E-18 3.5E-23 183.6 9.1 171 170-402 17-187 (263)
371 1zth_A RIO1 serine protein kin 99.8 7.8E-19 2.7E-23 184.0 8.0 137 618-767 48-219 (258)
372 4ezg_A Putative uncharacterize 99.7 1.8E-18 6.2E-23 173.5 9.2 155 96-259 40-195 (197)
373 4ezg_A Putative uncharacterize 99.7 2.7E-18 9.1E-23 172.3 9.3 105 334-442 39-143 (197)
374 1xeu_A Internalin C; cellular 99.7 3.9E-18 1.3E-22 179.2 10.1 168 316-511 20-187 (263)
375 3sb4_A Hypothetical leucine ri 99.7 8.2E-19 2.8E-23 191.3 1.4 101 338-440 225-326 (329)
376 1w8a_A SLIT protein; signaling 99.7 1.7E-17 5.8E-22 165.5 9.0 131 81-214 13-144 (192)
377 1w8a_A SLIT protein; signaling 99.7 5.6E-18 1.9E-22 169.0 5.4 130 366-511 11-141 (192)
378 3sb4_A Hypothetical leucine ri 99.7 2.5E-18 8.5E-23 187.5 2.3 289 90-418 13-328 (329)
379 2o6r_A Variable lymphocyte rec 99.7 9E-17 3.1E-21 158.1 9.7 135 64-213 7-141 (177)
380 2ell_A Acidic leucine-rich nuc 99.7 8.5E-17 2.9E-21 156.8 8.8 108 100-209 24-133 (168)
381 2ell_A Acidic leucine-rich nuc 99.7 6.8E-17 2.3E-21 157.5 7.8 136 76-215 24-165 (168)
382 2je0_A Acidic leucine-rich nuc 99.6 1.1E-16 3.8E-21 152.5 6.0 108 100-209 17-126 (149)
383 4gyi_A RIO2 kinase; protein ki 99.6 1.1E-16 3.6E-21 173.7 6.3 138 617-768 95-266 (397)
384 2wfh_A SLIT homolog 2 protein 99.6 5.8E-16 2E-20 154.3 10.4 125 81-209 15-139 (193)
385 2je0_A Acidic leucine-rich nuc 99.6 1.2E-16 4.2E-21 152.3 5.2 128 76-205 17-149 (149)
386 2wfh_A SLIT homolog 2 protein 99.6 1.3E-15 4.3E-20 151.8 11.2 128 390-534 13-140 (193)
387 2o6r_A Variable lymphocyte rec 99.6 1.8E-15 6.2E-20 148.7 10.8 132 390-537 10-141 (177)
388 1ds9_A Outer arm dynein; leuci 99.6 2.2E-17 7.4E-22 165.7 -3.4 155 97-259 15-186 (198)
389 4fdw_A Leucine rich hypothetic 99.6 6.9E-15 2.3E-19 163.7 15.0 113 333-448 265-383 (401)
390 4fdw_A Leucine rich hypothetic 99.6 1.8E-14 6.3E-19 160.2 15.6 269 100-423 113-382 (401)
391 1ds9_A Outer arm dynein; leuci 99.6 3.8E-17 1.3E-21 163.9 -5.7 151 363-533 18-185 (198)
392 1a9n_A U2A', U2A'; complex (nu 99.5 2.6E-15 8.9E-20 147.4 5.2 134 96-259 15-154 (176)
393 1a9n_A U2A', U2A'; complex (nu 99.5 7.7E-15 2.6E-19 144.0 5.2 133 383-534 15-154 (176)
394 3g39_A Variable lymphocyte rec 99.5 7.1E-14 2.4E-18 136.1 8.3 105 80-187 13-117 (170)
395 4fs7_A Uncharacterized protein 99.5 3.2E-13 1.1E-17 150.8 14.7 153 93-253 64-216 (394)
396 4fs7_A Uncharacterized protein 99.4 5.5E-13 1.9E-17 148.9 14.6 336 111-525 58-393 (394)
397 2r9u_A Variable lymphocyte rec 99.4 1.5E-13 5E-18 134.3 8.4 106 79-187 15-120 (174)
398 3g39_A Variable lymphocyte rec 99.4 2.7E-13 9.3E-18 131.9 10.2 107 102-211 11-117 (170)
399 2r9u_A Variable lymphocyte rec 99.4 3.8E-13 1.3E-17 131.4 10.4 104 103-209 15-118 (174)
400 2ifg_A High affinity nerve gro 99.4 8.1E-13 2.8E-17 144.9 9.0 110 64-187 8-118 (347)
401 3un9_A NLR family member X1; l 99.3 2.4E-14 8.1E-19 157.7 -7.6 14 148-161 72-85 (372)
402 2ifg_A High affinity nerve gro 99.3 1.8E-12 6.2E-17 142.1 6.6 105 103-210 11-117 (347)
403 3un9_A NLR family member X1; l 99.3 3.8E-14 1.3E-18 156.1 -7.3 88 338-425 71-169 (372)
404 3tm0_A Aminoglycoside 3'-phosp 99.3 6E-12 2E-16 132.1 9.5 147 612-765 9-212 (263)
405 4gt6_A Cell surface protein; l 99.2 6.5E-11 2.2E-15 132.0 14.1 130 118-253 57-190 (394)
406 4gt6_A Cell surface protein; l 99.2 1.9E-10 6.4E-15 128.3 15.1 124 137-265 52-179 (394)
407 1nd4_A Aminoglycoside 3'-phosp 99.1 6.9E-11 2.3E-15 123.8 8.8 139 616-766 19-214 (264)
408 3rw6_A Nuclear RNA export fact 99.0 1.5E-12 5.3E-17 134.4 -9.2 147 63-213 77-237 (267)
409 2ra8_A Uncharacterized protein 98.9 7.4E-11 2.5E-15 128.6 -0.9 182 75-260 106-322 (362)
410 3sg8_A APH(2'')-ID; antibiotic 98.9 6.1E-10 2.1E-14 119.4 5.7 185 622-821 25-289 (304)
411 3dxp_A Putative acyl-COA dehyd 98.9 2E-09 6.8E-14 118.3 9.9 142 621-766 42-248 (359)
412 2ra8_A Uncharacterized protein 98.9 6E-10 2.1E-14 121.4 3.8 186 99-304 106-321 (362)
413 4h09_A Hypothetical leucine ri 98.8 5.6E-08 1.9E-12 107.6 16.2 58 96-156 42-99 (379)
414 4h09_A Hypothetical leucine ri 98.8 6.6E-08 2.2E-12 107.0 16.7 129 119-256 41-169 (379)
415 3r70_A Aminoglycoside phosphot 98.7 1.3E-07 4.5E-12 101.8 13.1 137 618-767 38-238 (320)
416 1io0_A Tropomodulin; LRR prote 98.6 1.5E-09 5.1E-14 106.8 -4.9 119 91-209 27-164 (185)
417 3rw6_A Nuclear RNA export fact 98.5 1.2E-08 4.2E-13 105.2 -0.5 61 464-526 188-257 (267)
418 3tdw_A Gentamicin resistance p 98.5 1.1E-06 3.9E-11 93.7 14.6 136 622-766 24-224 (306)
419 4gkh_A Aminoglycoside 3'-phosp 98.4 1.2E-06 4.3E-11 91.7 13.6 136 623-766 30-223 (272)
420 3ovc_A Hygromycin-B 4-O-kinase 98.4 1.4E-06 4.9E-11 95.1 12.2 77 619-701 43-122 (362)
421 3d1u_A Putative fructosamine-3 98.3 1.3E-06 4.6E-11 92.0 10.6 77 620-700 18-97 (288)
422 1io0_A Tropomodulin; LRR prote 98.3 7.6E-08 2.6E-12 94.5 -1.2 94 332-425 29-137 (185)
423 3ats_A Putative uncharacterize 98.2 1.2E-06 4.2E-11 95.8 7.0 81 622-702 25-122 (357)
424 2olc_A MTR kinase, methylthior 98.0 1.5E-05 5.1E-10 88.5 10.8 75 622-698 35-120 (397)
425 2q83_A YTAA protein; 2635576, 98.0 2.2E-05 7.7E-10 85.1 10.9 138 623-765 38-251 (346)
426 3jr1_A Putative fructosamine-3 97.8 8.5E-05 2.9E-09 78.8 12.0 136 622-762 41-232 (312)
427 3e4g_A ATP synthase subunit S, 97.8 3.3E-06 1.1E-10 80.6 0.7 59 100-158 61-124 (176)
428 3e4g_A ATP synthase subunit S, 97.7 6.4E-06 2.2E-10 78.6 1.1 83 125-207 62-150 (176)
429 3f7w_A Putative fructosamine-3 97.6 0.00016 5.3E-09 76.3 9.8 79 618-700 16-97 (288)
430 2ppq_A HSK, HK, homoserine kin 97.6 0.00014 4.9E-09 77.9 9.3 158 605-765 5-216 (322)
431 2pyw_A Uncharacterized protein 97.5 0.00018 6.3E-09 80.2 9.8 79 734-816 230-313 (420)
432 3csv_A Aminoglycoside phosphot 97.4 0.00028 9.6E-09 76.0 9.4 140 623-767 24-218 (333)
433 1zyl_A Hypothetical protein YI 97.4 0.00065 2.2E-08 72.9 11.4 159 604-766 8-223 (328)
434 3feg_A Choline/ethanolamine ki 97.3 0.00054 1.8E-08 74.7 9.6 140 622-766 55-254 (379)
435 3dxq_A Choline/ethanolamine ki 97.2 0.00066 2.3E-08 71.9 8.4 128 622-766 23-202 (301)
436 1nw1_A Choline kinase (49.2 KD 97.1 0.00051 1.7E-08 76.6 7.3 73 622-700 78-159 (429)
437 1pgv_A TMD-1, tropomodulin TMD 97.1 2.5E-05 8.5E-10 76.0 -3.0 88 94-181 35-135 (197)
438 2qg7_A Ethanolamine kinase PV0 97.1 0.00074 2.5E-08 75.6 8.3 74 622-700 113-188 (458)
439 3c5i_A Choline kinase; choline 96.8 0.0018 6.3E-08 70.6 8.1 74 622-700 38-121 (369)
440 3i1a_A Spectinomycin phosphotr 96.8 0.0018 6.3E-08 69.7 7.8 66 628-700 34-108 (339)
441 3rfe_A Platelet glycoprotein I 96.7 0.0019 6.6E-08 58.5 5.7 56 476-533 12-68 (130)
442 2yle_A Protein spire homolog 1 96.6 0.0058 2E-07 59.6 9.0 105 698-820 33-137 (229)
443 3f2s_A CK, chetk-alpha, cholin 96.6 0.005 1.7E-07 67.3 9.6 141 622-766 57-280 (401)
444 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00022 7.6E-09 69.3 -1.2 14 339-352 98-111 (197)
445 3rfe_A Platelet glycoprotein I 96.5 0.003 1E-07 57.2 5.6 55 80-136 12-67 (130)
446 3mes_A Choline kinase; malaria 95.5 0.035 1.2E-06 61.1 9.5 74 622-700 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 94.0 0.1 3.4E-06 57.4 8.3 30 737-766 245-280 (401)
448 4ann_A ESSB; membrane protein, 84.6 1.9 6.6E-05 41.9 7.2 122 671-827 43-165 (215)
449 4ano_A ESSB; membrane protein, 73.9 8.8 0.0003 37.4 8.0 117 671-822 48-165 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 70.2 0.57 2E-05 52.2 -1.6 59 621-682 146-213 (463)
451 2x6h_A GH13170P, VPS34, phosph 43.3 2.8E+02 0.0097 31.9 14.5 45 714-765 529-575 (696)
452 2ks1_B Epidermal growth factor 37.6 26 0.0009 24.3 2.9 10 577-586 31-40 (44)
453 2l2t_A Receptor tyrosine-prote 35.1 32 0.0011 23.8 3.0 12 576-587 29-40 (44)
454 2lz0_A Uncharacterized protein 33.8 39 0.0013 28.2 4.1 39 117-156 13-51 (100)
455 2lz0_A Uncharacterized protein 32.9 33 0.0011 28.7 3.5 46 326-372 7-52 (100)
456 3ls8_A Phosphatidylinositol 3- 31.0 3.6E+02 0.012 30.5 12.5 82 676-765 402-501 (614)
457 1cja_A Protein (actin-fragmin 29.9 1.4E+02 0.0048 31.0 8.2 136 622-766 74-237 (342)
458 2k1k_A Ephrin type-A receptor 29.3 38 0.0013 22.6 2.5 21 557-577 10-30 (38)
459 3ox7_P MH027; urokinase-type p 27.4 18 0.00061 20.1 0.6 9 62-70 6-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1e-75 Score=715.75 Aligned_cols=529 Identities=31% Similarity=0.478 Sum_probs=425.8
Q ss_pred HHhhcCChhHHHHHHHHHhccccCCCcccccCCCCCCCCcceeeeEeeCCCCeEEEEEeeccccccc---CC--------
Q 045539 25 AAAASNITTDQQALLALKAHISYDHTNLFARNWTSSTSVCSWIGITCDVNSHRVIGLNISSFNLQGT---IP-------- 93 (897)
Q Consensus 25 ~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~---~~-------- 93 (897)
++++.+.++|++||++||+++. ||. .++ +|+.+++||+|+||+|+ ++||++|||+++++.|. +|
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~-~~~-~l~-~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~ 78 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLP-DKN-LLP-DWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTG 78 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCS-CTT-SST-TCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTT
T ss_pred CccccCCHHHHHHHHHHHhhCC-Ccc-ccc-CCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCc
Confidence 4455567889999999999997 676 665 99988999999999998 68999999999999887 43
Q ss_pred ---------------CCCCCCCCCceecccCccccCcCCc--cccCCCCCcEEeccCccccCCccccc------------
Q 045539 94 ---------------PQLGNLSSLQTLDLSHNKLSGNIPS--SIFNMHTLKLLYFSDNQLFGSLSFFI------------ 144 (897)
Q Consensus 94 ---------------~~l~~l~~L~~L~Ls~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~~~------------ 144 (897)
+.++++++|++|||++|.++|.+|. .++++++|++|+|++|.+.+.+|..+
T Consensus 79 L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 158 (768)
T 3rgz_A 79 LESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 158 (768)
T ss_dssp CCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEEC
T ss_pred ccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEEC
Confidence 5788889999999999999988888 88888888888888888776655432
Q ss_pred --------------------------------------cccccccEEEeeecCCCCCCCccccCcccccccccccccccc
Q 045539 145 --------------------------------------FNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVG 186 (897)
Q Consensus 145 --------------------------------------~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 186 (897)
..+++|++|+|++|++++.+|. ++++++|++|+|++|++++
T Consensus 159 s~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~ 237 (768)
T 3rgz_A 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSG 237 (768)
T ss_dssp CSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCS
T ss_pred CCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCC
Confidence 2345566666666666665665 7778888888888888887
Q ss_pred cccccccccccccccccccccccc----------------------cCCccccccccccceeecccccccccccccccCC
Q 045539 187 VAPVTIFNMSALKEIYLLNNSLSG----------------------SLPSRIDLSLPNVETLNLGINSFYGTVPSSITNA 244 (897)
Q Consensus 187 ~~~~~~~~l~~L~~L~L~~N~l~~----------------------~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 244 (897)
..|..+.++++|++|+|++|++++ .+|..++..+++|++|+|++|.+++.+|..|+++
T Consensus 238 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l 317 (768)
T 3rgz_A 238 DFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317 (768)
T ss_dssp CHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGC
T ss_pred cccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcC
Confidence 777777777777777776666654 4444444334666666777776666666666677
Q ss_pred CcccEEEccccccccccCcc-ccc--------cccccccCCCCcc-c-------------------ccccccc--cCCCc
Q 045539 245 SKLSDLELGVNLFSGFIPNT-FVN--------MADNYLTSSTPEL-S-------------------FLSSLTN--CKKLK 293 (897)
Q Consensus 245 ~~L~~L~L~~N~l~~~~~~~-f~~--------l~~~~l~~~~~~~-~-------------------~l~~l~~--l~~L~ 293 (897)
++|++|+|++|.+++.+|.. |.. +..|.+.+..+.. . .+..+.. +++|+
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 397 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCC
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCcc
Confidence 77777777777666555543 322 2233333221110 0 0111112 55677
Q ss_pred EEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCc
Q 045539 294 VLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRN 373 (897)
Q Consensus 294 ~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 373 (897)
+|++++|++++.+|..+..++ +|++|++++|.+++.+|..++.+++|++|++++|++++.+|..|..+++|++|+|++|
T Consensus 398 ~L~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 476 (768)
T 3rgz_A 398 ELYLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 476 (768)
T ss_dssp EEECCSSEEEEECCGGGGGCT-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred EEECCCCccccccCHHHhcCC-CCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCC
Confidence 777777777777777777776 7888888888888888888888888888888888888888888888889999999999
Q ss_pred ccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCccc-----
Q 045539 374 KLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLN----- 448 (897)
Q Consensus 374 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~----- 448 (897)
++++.+|..+..+++|++|+|++|++++.+|..++++++|+.|++++|++++.+|..+.++++|++|++++|.+.
T Consensus 477 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 477 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred cccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCCh
Confidence 998888888988999999999999999888998999999999999999999889999999999999999888653
Q ss_pred ----------------------------------------------------------------------------ccce
Q 045539 449 ----------------------------------------------------------------------------VLIG 452 (897)
Q Consensus 449 ----------------------------------------------------------------------------~l~~ 452 (897)
.|+.
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~ 636 (768)
T 3rgz_A 557 AMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636 (768)
T ss_dssp GGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCE
T ss_pred HHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccE
Confidence 3667
Q ss_pred eecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcc
Q 045539 453 LNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKL 532 (897)
Q Consensus 453 l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 532 (897)
|||++|+++|.+|..++.+++|+.|+|++|+++|.+|..|+++++|++||||+|+++|.+|..+..+++|++|||++|+|
T Consensus 637 LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp EECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred EECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCcccccchhhhhhhh
Q 045539 533 EGEIPRGGPFANLTAKSFMGNELLKMLL 560 (897)
Q Consensus 533 ~~~~p~~~~~~~~~~~~~~~N~~~c~~~ 560 (897)
+|.||.++++.++...+|.|||++||.+
T Consensus 717 ~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 717 SGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp EEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred cccCCCchhhccCCHHHhcCCchhcCCC
Confidence 9999999999999999999999999964
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.8e-59 Score=554.40 Aligned_cols=457 Identities=20% Similarity=0.261 Sum_probs=287.9
Q ss_pred ChhHHHHHHHHHhccccCCCc-------ccccCCCCCCCCcce---eeeEeeCCCCeEEEEEeecccccccCCCCCCCCC
Q 045539 31 ITTDQQALLALKAHISYDHTN-------LFARNWTSSTSVCSW---IGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLS 100 (897)
Q Consensus 31 ~~~~~~aLl~~k~~~~~~~~~-------~~~~~w~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~ 100 (897)
...|++||.+||.++..+... .. .+|+.+++||.| .||+|+.. |||++|+|++++++|.+|+++++|+
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~-~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPG-ANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC-------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccC-CCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCc
Confidence 357999999999998543221 11 279988999999 99999865 8999999999999999999999999
Q ss_pred CCceecccCccc------cC---------------------------cCCcccc-------------------CCCCCcE
Q 045539 101 SLQTLDLSHNKL------SG---------------------------NIPSSIF-------------------NMHTLKL 128 (897)
Q Consensus 101 ~L~~L~Ls~n~l------~~---------------------------~~p~~~~-------------------~l~~L~~ 128 (897)
+|++|||++|.+ .| .+|..+. ....++.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 999999999965 11 1111111 0011111
Q ss_pred Eecc--CccccCCccccccccccccEEEeeecCCCCC-----------------CCcccc--Cccccccccccccccccc
Q 045539 129 LYFS--DNQLFGSLSFFIFNVSSVTTIDLSINGLSGE-----------------MPREIG--NLPYLARLAFATNNLVGV 187 (897)
Q Consensus 129 L~Ls--~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~-----------------~p~~l~--~l~~L~~L~L~~N~l~~~ 187 (897)
+.+. .|++++ +|..++++++|++|||++|++++. +|..++ ++++|++|+|++|++.+.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 1111 345555 455555555555555555555543 555555 555555555555555555
Q ss_pred cccccccccccccccccccc-ccc-cCCccccc-----cccccceeecccccccccccc--cccCCCcccEEEccccccc
Q 045539 188 APVTIFNMSALKEIYLLNNS-LSG-SLPSRIDL-----SLPNVETLNLGINSFYGTVPS--SITNASKLSDLELGVNLFS 258 (897)
Q Consensus 188 ~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~-----~l~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~ 258 (897)
+|..|+++++|++|+|++|+ ++| .+|..++. .+++|++|+|++|+++ .+|. .++++++|++|++++|.++
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~ 343 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLE 343 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCE
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCc
Confidence 55555555555555555555 554 45544431 1255555555555555 4555 5555555555555555555
Q ss_pred cccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCc
Q 045539 259 GFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNL 338 (897)
Q Consensus 259 ~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l 338 (897)
|.+| . +..+++|++|+|++|+++ .+|..+..+..+|++|++++|.++ .+|..+..+
T Consensus 344 g~ip-~---------------------~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~ 399 (636)
T 4eco_A 344 GKLP-A---------------------FGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAK 399 (636)
T ss_dssp EECC-C---------------------CEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTT
T ss_pred cchh-h---------------------hCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhc
Confidence 4444 2 233445555555555555 444445555422555555555555 455555554
Q ss_pred c--CCcEEEccCCCCCCCcccccc-------CccchhhhcccCcccccccchhhhcccccccccccccccccCCCccccc
Q 045539 339 G--NLLVLELGGNNLTEPIPITFS-------QLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGN 409 (897)
Q Consensus 339 ~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 409 (897)
+ +|++|++++|++++.+|..|. .+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..
T Consensus 400 ~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~ 478 (636)
T 4eco_A 400 SVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLK 478 (636)
T ss_dssp CSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSE
T ss_pred ccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhc
Confidence 3 677777777777777777776 6667777777777777443344555777777777777777 45543322
Q ss_pred -c-------cccceeccccccccCCcccccc--ccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccc
Q 045539 410 -L-------TSLRVLYLGLNRFTSALPSTIW--NLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFL 479 (897)
Q Consensus 410 -l-------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~l 479 (897)
. ++|+.|+|++|+++ .+|..+. .+++|+ .|+|++|++++ +|..++.+++|+.|+|
T Consensus 479 ~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~-------------~L~Ls~N~l~~-ip~~~~~l~~L~~L~L 543 (636)
T 4eco_A 479 DENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLV-------------GIDLSYNSFSK-FPTQPLNSSTLKGFGI 543 (636)
T ss_dssp ETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCC-------------EEECCSSCCSS-CCCGGGGCSSCCEEEC
T ss_pred cccccccccCCccEEECcCCcCC-ccChhhhhccCCCcC-------------EEECCCCCCCC-cChhhhcCCCCCEEEC
Confidence 2 27777777777777 4666665 666666 44455555555 6777777777777777
Q ss_pred ------cCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcccc
Q 045539 480 ------EYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEG 534 (897)
Q Consensus 480 ------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 534 (897)
++|++.+.+|..++++++|+.|+|++|+| +.+|..+. ++|+.|+|++|++..
T Consensus 544 s~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 544 RNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred CCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 45667777777777777777777777777 47777655 677777777777654
No 3
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.6e-58 Score=559.13 Aligned_cols=451 Identities=19% Similarity=0.249 Sum_probs=255.1
Q ss_pred cCChhHHHHHHHHHhccccCCCcccccCCCCCC-----CC--cce------------eeeEeeCCCCeEEEEEeeccccc
Q 045539 29 SNITTDQQALLALKAHISYDHTNLFARNWTSST-----SV--CSW------------IGITCDVNSHRVIGLNISSFNLQ 89 (897)
Q Consensus 29 ~~~~~~~~aLl~~k~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~l~l~~~~l~ 89 (897)
++..+|++||++||+++. +| +|+.+. +| |+| .||+|+. ++||++|+|+++++.
T Consensus 265 ~~~~~d~~ALl~~k~~l~-~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALD-GK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAK 336 (876)
T ss_dssp CHHHHHHHHHHHHHHHTT-GG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCE
T ss_pred ccchHHHHHHHHHHHHcC-CC------CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCC
Confidence 344679999999999994 43 676443 45 999 9999986 689999999999999
Q ss_pred ccCCCCCCCCCCCceecc-cCccccCcCCccc------------------------------------------------
Q 045539 90 GTIPPQLGNLSSLQTLDL-SHNKLSGNIPSSI------------------------------------------------ 120 (897)
Q Consensus 90 g~~~~~l~~l~~L~~L~L-s~n~l~~~~p~~~------------------------------------------------ 120 (897)
|.+|++|++|++|++||| ++|.++|..|...
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 8888776522110
Q ss_pred ---cCCCCCcEEeccC--ccccCCccccccccccccEEEeeecCCCC-----------------CCCcccc--Ccccccc
Q 045539 121 ---FNMHTLKLLYFSD--NQLFGSLSFFIFNVSSVTTIDLSINGLSG-----------------EMPREIG--NLPYLAR 176 (897)
Q Consensus 121 ---~~l~~L~~L~Ls~--N~l~~~~~~~~~~l~~L~~LdLs~N~l~~-----------------~~p~~l~--~l~~L~~ 176 (897)
.+...++.+.+.. |++.+ +|..+.++++|++|+|++|+|++ .+|..++ ++++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 1111222233322 55555 45555555555555555555554 2555555 5555555
Q ss_pred ccccccccccccccccccccccccccccccc-ccc-cCCcccc------ccccccceeecccccccccccc--cccCCCc
Q 045539 177 LAFATNNLVGVAPVTIFNMSALKEIYLLNNS-LSG-SLPSRID------LSLPNVETLNLGINSFYGTVPS--SITNASK 246 (897)
Q Consensus 177 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~------~~l~~L~~L~L~~N~l~~~~p~--~l~~l~~ 246 (897)
|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..+. ..+++|++|+|++|.++ .+|. .+.++++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 5555555555555555555555555555555 554 4554332 12235555555555555 4555 5555555
Q ss_pred ccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCC
Q 045539 247 LSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCS 326 (897)
Q Consensus 247 L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~ 326 (897)
|+.|+|++|.++ .+| . +.++++|+.|+|++|++. .+|..+..++.+|+.|++++|.
T Consensus 575 L~~L~Ls~N~l~-~lp-~---------------------~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 575 LGLLDCVHNKVR-HLE-A---------------------FGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp CCEEECTTSCCC-BCC-C---------------------CCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred CCEEECCCCCcc-cch-h---------------------hcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCC
Confidence 555555555555 222 1 234455555555555555 4455555554225555555555
Q ss_pred CCCCcCccccCccC--CcEEEccCCCCCCCccccc---c--CccchhhhcccCcccccccchhhhccccccccccccccc
Q 045539 327 ISGNIPQVVGNLGN--LLVLELGGNNLTEPIPITF---S--QLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKF 399 (897)
Q Consensus 327 l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 399 (897)
++ .+|..+..++. |+.|+|++|++++.+|... . .+++|+.|+|++|+++...+..+..+++|+.|+|++|++
T Consensus 631 L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L 709 (876)
T 4ecn_A 631 LK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLM 709 (876)
T ss_dssp CC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCC
T ss_pred CC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcC
Confidence 55 44555544433 5555555555555443221 1 223555555555555532222233455555555555555
Q ss_pred ccCCCccccc--------ccccceeccccccccCCcccccc--ccccceEEeecCCcccccceeecccCcCCCCCccccc
Q 045539 400 SGSIPSCLGN--------LTSLRVLYLGLNRFTSALPSTIW--NLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIG 469 (897)
Q Consensus 400 ~~~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~ 469 (897)
+ .+|..+.. +++|+.|+|++|+++ .+|..+. .+++|+ .|+|++|++++ +|..++
T Consensus 710 ~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~-------------~L~Ls~N~L~~-lp~~l~ 773 (876)
T 4ecn_A 710 T-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLS-------------NMDVSYNCFSS-FPTQPL 773 (876)
T ss_dssp S-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCC-------------EEECCSSCCSS-CCCGGG
T ss_pred C-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcC-------------EEEeCCCCCCc-cchhhh
Confidence 5 34433222 225555555555555 3455444 455554 33333344443 455555
Q ss_pred CCcccccccccC------ceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCccc
Q 045539 470 GLKNLQQMFLEY------NRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLE 533 (897)
Q Consensus 470 ~l~~L~~L~ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 533 (897)
.+++|+.|+|++ |++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|||++|++.
T Consensus 774 ~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 774 NSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNI 840 (876)
T ss_dssp GCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTC
T ss_pred cCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCC
Confidence 555555555544 555555555555555555555555555 35555543 35555555555554
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.1e-58 Score=557.86 Aligned_cols=455 Identities=35% Similarity=0.494 Sum_probs=394.7
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEe
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDL 155 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 155 (897)
.++..|+|++|++++.+|. ++++++|++|+|++|.+++.+|..|+++++|++|+|++|++.+.+|.. .+++|++|+|
T Consensus 200 ~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L 276 (768)
T 3rgz_A 200 VNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSL 276 (768)
T ss_dssp TTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEEC
T ss_pred CcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEEC
Confidence 3567788888888877776 888888888888888888888888888888888888888888777765 7888888888
Q ss_pred eecCCCCCCCccccCc-ccccccccccccccccccccccccccccccccccccccccCCccccccccccceeeccccccc
Q 045539 156 SINGLSGEMPREIGNL-PYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFY 234 (897)
Q Consensus 156 s~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~ 234 (897)
++|++++.+|..+..+ ++|++|+|++|++++..|..|+++++|++|+|++|+++|.+|...+..+++|++|+|++|.++
T Consensus 277 ~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~ 356 (768)
T 3rgz_A 277 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFS 356 (768)
T ss_dssp CSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEE
T ss_pred cCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccC
Confidence 8888888888888775 999999999999999989999999999999999999998899886668899999999999999
Q ss_pred ccccccccCCC-cccEEEccccccccccCccccc-----cccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCC
Q 045539 235 GTVPSSITNAS-KLSDLELGVNLFSGFIPNTFVN-----MADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPK 308 (897)
Q Consensus 235 ~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~f~~-----l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~ 308 (897)
+.+|..+.+++ +|+.|++++|.+++.+|..+.. +....+..+.........+.++++|++|+|++|++++.+|.
T Consensus 357 ~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 436 (768)
T 3rgz_A 357 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 436 (768)
T ss_dssp ECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCG
T ss_pred ccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccH
Confidence 89999998887 8999999999998877766533 32233333222223345688899999999999999999999
Q ss_pred cccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccc
Q 045539 309 SKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLAR 388 (897)
Q Consensus 309 ~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 388 (897)
.+..++ +|+.|++++|.+++.+|..+..+++|++|++++|++++.+|..|.++++|++|+|++|++++.+|.+++.+++
T Consensus 437 ~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 515 (768)
T 3rgz_A 437 SLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515 (768)
T ss_dssp GGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTT
T ss_pred HHhcCC-CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCC
Confidence 999887 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCcccccccccceeccccccccCCcccccc------------------------------------
Q 045539 389 LHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIW------------------------------------ 432 (897)
Q Consensus 389 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~------------------------------------ 432 (897)
|++|+|++|+++|.+|..++++++|+.|++++|+++|.+|..++
T Consensus 516 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (768)
T 3rgz_A 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLE 595 (768)
T ss_dssp CCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEE
T ss_pred CCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999887776543
Q ss_pred ----------------------------------ccccceEEeecCCccc-----------ccceeecccCcCCCCCccc
Q 045539 433 ----------------------------------NLKDILFIDVSSNSLN-----------VLIGLNFSRNNLSGDIPIT 467 (897)
Q Consensus 433 ----------------------------------~l~~L~~L~ls~N~l~-----------~l~~l~ls~n~l~~~~p~~ 467 (897)
.+++|++||+++|+++ .|+.|+|++|+++|.+|..
T Consensus 596 ~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~ 675 (768)
T 3rgz_A 596 FQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE 675 (768)
T ss_dssp CTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGG
T ss_pred cccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChH
Confidence 3567899999999874 4788999999999999999
Q ss_pred ccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCc-cccc
Q 045539 468 IGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNK-LEGE 535 (897)
Q Consensus 468 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~~~ 535 (897)
++.+++|+.|+|++|+++|.+|..++++++|++||||+|+|+|.+|.. ..+..+....+.+|+ |+|.
T Consensus 676 l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 676 VGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp GGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred HhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 999999999999999999999999999999999999999999999974 445566667788886 6764
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-54 Score=516.18 Aligned_cols=478 Identities=20% Similarity=0.199 Sum_probs=384.2
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEe
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDL 155 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 155 (897)
..++.|+|++|++++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++|++.+..|..|.++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 35778888888888777888888888888888888888777888888888888888888888888888888888888888
Q ss_pred eecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccccc--eeecccccc
Q 045539 156 SINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVE--TLNLGINSF 233 (897)
Q Consensus 156 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~--~L~L~~N~l 233 (897)
++|++++..|..++++++|++|++++|+++++.+..+.++++|++|++++|++++ ++...+..+++|+ .|++++|.+
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY-LSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE-ECHHHHHTTTTCCSEEEECTTCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc-cChhhhhhhcccceeEEecCCCcc
Confidence 8888886557778888888888888888888665556668888888888888874 4333344677777 788888888
Q ss_pred cccccccccCCCcccEEEccccccc--------------------------cccCccccc-----cccccccCCCCcccc
Q 045539 234 YGTVPSSITNASKLSDLELGVNLFS--------------------------GFIPNTFVN-----MADNYLTSSTPELSF 282 (897)
Q Consensus 234 ~~~~p~~l~~l~~L~~L~L~~N~l~--------------------------~~~~~~f~~-----l~~~~l~~~~~~~~~ 282 (897)
++..|..+.. .+|+.|++++|... ...+..|.. +....++.+......
T Consensus 192 ~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~ 270 (606)
T 3t6q_A 192 AGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNIS 270 (606)
T ss_dssp CEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCC
T ss_pred CccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccC
Confidence 8776666554 56777777766410 000111111 111111111111111
Q ss_pred cccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccc-cccC
Q 045539 283 LSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPI-TFSQ 361 (897)
Q Consensus 283 l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~ 361 (897)
...+.++++|++|++++|+++ .+|..+..++ +|++|++++|.+++..|..+..+++|++|++++|.+.+.+|. .+..
T Consensus 271 ~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 348 (606)
T 3t6q_A 271 SNTFHCFSGLQELDLTATHLS-ELPSGLVGLS-TLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLEN 348 (606)
T ss_dssp TTTTTTCTTCSEEECTTSCCS-CCCSSCCSCT-TCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTT
T ss_pred HHHhccccCCCEEeccCCccC-CCChhhcccc-cCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhc
Confidence 223678899999999999998 5677888887 899999999999988899999999999999999999865554 5889
Q ss_pred ccchhhhcccCccccccc--chhhhcccccccccccccccccCCCcccccccccceeccccccccCCcccc-ccccccce
Q 045539 362 LQTLQALGLTRNKLAGPI--TDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPST-IWNLKDIL 438 (897)
Q Consensus 362 l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~ 438 (897)
+++|++|++++|++++.. +..+..+++|++|++++|++++..|..++++++|+.|++++|++++..|.. +..+++|+
T Consensus 349 l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 428 (606)
T 3t6q_A 349 LENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLK 428 (606)
T ss_dssp CTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCC
T ss_pred cCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCC
Confidence 999999999999998766 778999999999999999999888999999999999999999998876654 88999999
Q ss_pred EEeecCCccc-----------ccceeecccCcCCCC---CcccccCCcccccccccCceecccCCCCCCCcCCCcEEecc
Q 045539 439 FIDVSSNSLN-----------VLIGLNFSRNNLSGD---IPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLS 504 (897)
Q Consensus 439 ~L~ls~N~l~-----------~l~~l~ls~n~l~~~---~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls 504 (897)
+|++++|.+. .|+.|++++|++++. .+..+..+++|++|++++|++++..|..|.++++|+.|+|+
T Consensus 429 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 508 (606)
T 3t6q_A 429 VLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLS 508 (606)
T ss_dssp EEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred EEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECC
Confidence 9999999753 578899999999873 34678999999999999999999999999999999999999
Q ss_pred CCccCCCCchhhhhhcccceEeccCCcccccCCCC-CCCCCCCcccccchhhhhh
Q 045539 505 KNKISGAIPASLQKLLYLKHLNLSFNKLEGEIPRG-GPFANLTAKSFMGNELLKM 558 (897)
Q Consensus 505 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~ 558 (897)
+|++++..|..+.+++.| .|+|++|++++.+|.. +.+.++..+.+.|||+.|.
T Consensus 509 ~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 509 HNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp SSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred CCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 999999999999999999 9999999999887753 3467788889999998875
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2e-53 Score=514.36 Aligned_cols=483 Identities=22% Similarity=0.231 Sum_probs=301.3
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEe
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDL 155 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 155 (897)
.+++.|+|++|++++..+.+++++++|++|||++|.+++..|..|+++++|++|+|++|++.+.++..|.++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47899999999999877788999999999999999999988999999999999999999999888888999999999999
Q ss_pred eecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCcccc-ccccccceeeccccccc
Q 045539 156 SINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRID-LSLPNVETLNLGINSFY 234 (897)
Q Consensus 156 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~~l~~L~~L~L~~N~l~ 234 (897)
++|++++..|..|+++++|++|+|++|++++..|..+.++++|++|++++|++++..+..+. ..+++|++|++++|.++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999977778899999999999999999999999999999999999999999855444332 24578899999999888
Q ss_pred ccccccccCC---------------------------CcccEEEccccccccccCccccccc-----cccccCCCCcccc
Q 045539 235 GTVPSSITNA---------------------------SKLSDLELGVNLFSGFIPNTFVNMA-----DNYLTSSTPELSF 282 (897)
Q Consensus 235 ~~~p~~l~~l---------------------------~~L~~L~L~~N~l~~~~~~~f~~l~-----~~~l~~~~~~~~~ 282 (897)
+..|..+..+ ++|+.|++++|.+++..|..|..+. ...++.+......
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 8777766554 4456666667777766666664432 2222222222222
Q ss_pred cccccccCCCcEEEecCCCCCCCCCCcccCch--------------------------------HHHHHHHhccCCCCCC
Q 045539 283 LSSLTNCKKLKVLILTGNPLDGILPKSKGNLS--------------------------------LSLEIILMDNCSISGN 330 (897)
Q Consensus 283 l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--------------------------------~~L~~L~l~~n~l~~~ 330 (897)
...+..+++|++|++++|++.+..|..+..+. .+|++|++++|.+++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 23456667777777777777666655444433 1344444444444444
Q ss_pred cCccccCccCCcEEEccCCCCCCC--ccccccCc--cchhhhcccCcccccccchhhhcccccccccccccccccCCC-c
Q 045539 331 IPQVVGNLGNLLVLELGGNNLTEP--IPITFSQL--QTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIP-S 405 (897)
Q Consensus 331 ~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~ 405 (897)
.+..|.++++|++|++++|.++.. .+..|..+ ++|+.|++++|++++..|..|..+++|++|+|++|++++.+| .
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 424 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSG
T ss_pred ChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcc
Confidence 444444444444444443332110 00111111 133333344444554555556666666666666666655444 4
Q ss_pred ccccccccceeccccccccCCccccccccccceEEeecCCcc-------------cccceeecccCcCCCCCcccccCCc
Q 045539 406 CLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSL-------------NVLIGLNFSRNNLSGDIPITIGGLK 472 (897)
Q Consensus 406 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l-------------~~l~~l~ls~n~l~~~~p~~~~~l~ 472 (897)
.+.++++|+.|++++|++++..+..|..+++|+.|++++|.+ +.|+.|++++|++++..|..++.++
T Consensus 425 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 504 (680)
T 1ziw_A 425 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE 504 (680)
T ss_dssp GGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccc
Confidence 555566666666666665555455555555555555555433 1244455555555544444444455
Q ss_pred ccccccccCceecc--------------------------------cCCCCCCCcCCCcEEeccCCccCCCCchhhhhhc
Q 045539 473 NLQQMFLEYNRLEG--------------------------------SIPESFGDLSSLEVLDLSKNKISGAIPASLQKLL 520 (897)
Q Consensus 473 ~L~~L~ls~N~l~~--------------------------------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 520 (897)
+|++|++++|++++ ..+..|.++++|+.|+|++|+|++..+..+..++
T Consensus 505 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~ 584 (680)
T 1ziw_A 505 KLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQV 584 (680)
T ss_dssp TCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCC
Confidence 55555555554443 2223345555555555555555533333444455
Q ss_pred ccceEeccCCcccccCCCCC--CCCCCCcccccchhhhhh
Q 045539 521 YLKHLNLSFNKLEGEIPRGG--PFANLTAKSFMGNELLKM 558 (897)
Q Consensus 521 ~L~~L~ls~N~l~~~~p~~~--~~~~~~~~~~~~N~~~c~ 558 (897)
+|+.|+|++|++++.+|... .+.++..+.+.|||+.|.
T Consensus 585 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 585 SLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp TCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred CCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 55555555555554433211 234444555555555553
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.5e-53 Score=520.56 Aligned_cols=481 Identities=20% Similarity=0.226 Sum_probs=399.9
Q ss_pred cceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcC-CccccCCCCCcEEeccCccccCCccc
Q 045539 64 CSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNI-PSSIFNMHTLKLLYFSDNQLFGSLSF 142 (897)
Q Consensus 64 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~~ 142 (897)
|.|.+|.+ ...+++.|||++|.+++..|.+|+++++|++|||++|.+.+.+ |..|+++++|++|+|++|++.+..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 67888887 4568999999999999999999999999999999999776666 78899999999999999999999999
Q ss_pred cccccccccEEEeeecCCCCCCCcc--ccCccccccccccccccccccc-ccccccccccccccccccccccCCcccccc
Q 045539 143 FIFNVSSVTTIDLSINGLSGEMPRE--IGNLPYLARLAFATNNLVGVAP-VTIFNMSALKEIYLLNNSLSGSLPSRIDLS 219 (897)
Q Consensus 143 ~~~~l~~L~~LdLs~N~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 219 (897)
.|.++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..|..+. .
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~-~ 170 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELE-P 170 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGH-H
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcc-c
Confidence 9999999999999999999877766 9999999999999999998865 5799999999999999999977776654 4
Q ss_pred c--cccceeecccccccccccccccCCCc------ccEEEccccccccccCcccccccc------cccc---------CC
Q 045539 220 L--PNVETLNLGINSFYGTVPSSITNASK------LSDLELGVNLFSGFIPNTFVNMAD------NYLT---------SS 276 (897)
Q Consensus 220 l--~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~L~~N~l~~~~~~~f~~l~~------~~l~---------~~ 276 (897)
+ ++|+.|+|++|.+.+..|..+..+++ |+.|++++|.+++..+..+..... ..+. ..
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 4 89999999999999999988887776 999999999998888776654211 0000 00
Q ss_pred CCccccccccccc--CCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCC
Q 045539 277 TPELSFLSSLTNC--KKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEP 354 (897)
Q Consensus 277 ~~~~~~l~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 354 (897)
.........+.++ ++|+.|+|++|.+.+..|..+..++ +|+.|++++|++++..|..|..+++|++|+|++|++++.
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 329 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLK-DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGEL 329 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCC-CCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCC-CCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCcc
Confidence 0000011123333 6788888888888888888888777 788888888888888888888888888888888888888
Q ss_pred ccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceecccccccc----------
Q 045539 355 IPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFT---------- 424 (897)
Q Consensus 355 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---------- 424 (897)
.|..|.++++|+.|+|++|++.+..+..|..+++|++|+|++|.+++ ++. +++|+.|++++|+++
T Consensus 330 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~----~~~L~~L~l~~N~l~~l~~~~~~l~ 404 (844)
T 3j0a_A 330 YSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IHF----IPSIPDIFLSGNKLVTLPKINLTAN 404 (844)
T ss_dssp CSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CSS----CCSCSEEEEESCCCCCCCCCCTTCC
T ss_pred CHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-ccC----CCCcchhccCCCCcccccccccccc
Confidence 88888888888888888888887777788888888888888888874 222 455555555555554
Q ss_pred ----------CCc-cccccccccceEEeecCCccc------------ccceeecccCcCC-----CCCcccccCCccccc
Q 045539 425 ----------SAL-PSTIWNLKDILFIDVSSNSLN------------VLIGLNFSRNNLS-----GDIPITIGGLKNLQQ 476 (897)
Q Consensus 425 ----------~~~-p~~~~~l~~L~~L~ls~N~l~------------~l~~l~ls~n~l~-----~~~p~~~~~l~~L~~ 476 (897)
+.. +..+.++++|+.|++++|+++ .|+.|+|++|.++ +..|..|..+++|+.
T Consensus 405 ~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~ 484 (844)
T 3j0a_A 405 LIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQV 484 (844)
T ss_dssp EEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEEC
T ss_pred eeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccE
Confidence 321 122457889999999999875 4778999999997 555677999999999
Q ss_pred ccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcccccCCCCCCCCCCCcccccchhhh
Q 045539 477 MFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIPRGGPFANLTAKSFMGNELL 556 (897)
Q Consensus 477 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~ 556 (897)
|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|++++.+|. .+.++..+.+.|||+.
T Consensus 485 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~--~~~~L~~l~l~~Np~~ 560 (844)
T 3j0a_A 485 LYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD--VFVSLSVLDITHNKFI 560 (844)
T ss_dssp CCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC--CCSSCCEEEEEEECCC
T ss_pred EECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh--HhCCcCEEEecCCCcc
Confidence 99999999999999999999999999999999987777666 8999999999999999986 4678888999999988
Q ss_pred h
Q 045539 557 K 557 (897)
Q Consensus 557 c 557 (897)
|
T Consensus 561 C 561 (844)
T 3j0a_A 561 C 561 (844)
T ss_dssp C
T ss_pred c
Confidence 8
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.4e-52 Score=500.02 Aligned_cols=472 Identities=20% Similarity=0.190 Sum_probs=403.4
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEe
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDL 155 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 155 (897)
.+++.|+|++|++++..+.+++++++|++|||++|++++..|..|+++++|++|+|++|++.+..|..|.++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57899999999999988889999999999999999999888999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCccccCccccccccccccccccc-ccccccccccccccccccccccccCCccccccccccc----eeeccc
Q 045539 156 SINGLSGEMPREIGNLPYLARLAFATNNLVGV-APVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVE----TLNLGI 230 (897)
Q Consensus 156 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~----~L~L~~ 230 (897)
++|++++..|..|+++++|++|++++|++++. .|..|+++++|++|+|++|++++..|..+ ..+++|+ +|++++
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDL-QFLRENPQVNLSLDMSL 190 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTT-HHHHHCTTCCCEEECTT
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhh-hhhhccccccceeeccC
Confidence 99999977778999999999999999999974 58999999999999999999996555444 3566655 799999
Q ss_pred ccccccccccccCCCcccEEEcccccccc-ccCccccccccc-----------------------------------ccc
Q 045539 231 NSFYGTVPSSITNASKLSDLELGVNLFSG-FIPNTFVNMADN-----------------------------------YLT 274 (897)
Q Consensus 231 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~f~~l~~~-----------------------------------~l~ 274 (897)
|.+++..+..+... +|+.|++++|.+++ ..|..+.++... .+.
T Consensus 191 n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 269 (606)
T 3vq2_A 191 NPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269 (606)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEEC
T ss_pred CCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecc
Confidence 99997666666655 99999999998863 333333322211 110
Q ss_pred CCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCC
Q 045539 275 SSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEP 354 (897)
Q Consensus 275 ~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 354 (897)
....-......+..+++|+.|++++|.+..+ | .+..+. +|+.|++++|.+ +.+| .+ .+++|++|++++|+..+.
T Consensus 270 ~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l-~-~l~~~~-~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~ 343 (606)
T 3vq2_A 270 YTNDFSDDIVKFHCLANVSAMSLAGVSIKYL-E-DVPKHF-KWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSIS 343 (606)
T ss_dssp CCTTCCGGGGSCGGGTTCSEEEEESCCCCCC-C-CCCTTC-CCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEE
T ss_pred ccccccccccccccCCCCCEEEecCccchhh-h-hccccc-cCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccc
Confidence 1111112223377889999999999999764 4 677666 899999999999 6777 45 999999999999966543
Q ss_pred ccccccCccchhhhcccCcccccc--cchhhhcccccccccccccccccCCCcccccccccceeccccccccCCcc-ccc
Q 045539 355 IPITFSQLQTLQALGLTRNKLAGP--ITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALP-STI 431 (897)
Q Consensus 355 ~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~ 431 (897)
..+..+++|++|++++|++++. +|..+..+++|++|++++|+++ .+|..+..+++|+.|++++|++++..| ..+
T Consensus 344 --~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 420 (606)
T 3vq2_A 344 --FKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAF 420 (606)
T ss_dssp --CCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTT
T ss_pred --hhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhh
Confidence 3678999999999999999976 3889999999999999999998 477899999999999999999998877 689
Q ss_pred cccccceEEeecCCcc-----------cccceeecccCcCCC-CCcccccCCcccccccccCceecccCCCCCCCcCCCc
Q 045539 432 WNLKDILFIDVSSNSL-----------NVLIGLNFSRNNLSG-DIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLE 499 (897)
Q Consensus 432 ~~l~~L~~L~ls~N~l-----------~~l~~l~ls~n~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 499 (897)
..+++|++|++++|.+ +.|+.|++++|++++ .+|..++.+++|++|++++|++++..|..|.++++|+
T Consensus 421 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 500 (606)
T 3vq2_A 421 LSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQ 500 (606)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCC
Confidence 9999999999999975 358899999999998 4799999999999999999999999999999999999
Q ss_pred EEeccCCccCCCCchhhhhhcccceEeccCCcccccCCCCCCCC-CCCcccccchhhhhh
Q 045539 500 VLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIPRGGPFA-NLTAKSFMGNELLKM 558 (897)
Q Consensus 500 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~-~~~~~~~~~N~~~c~ 558 (897)
+|+|++|++++.+|..+..+++|+.|+|++|+++..++....+. ++..+.+.|||+.|.
T Consensus 501 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 501 LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp EEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred EEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccC
Confidence 99999999999999999999999999999999995444334454 478889999999885
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1e-51 Score=492.67 Aligned_cols=438 Identities=22% Similarity=0.240 Sum_probs=388.6
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEe
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDL 155 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 155 (897)
.++..|+|++|++++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++|++.+..+..+.++++|++|+|
T Consensus 57 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L 136 (606)
T 3t6q_A 57 INLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYL 136 (606)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEEC
T ss_pred ccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEEC
Confidence 36789999999999999999999999999999999999899999999999999999999999988899999999999999
Q ss_pred eecCCCCCCCccccCccccccccccccccccccccccccccccc--ccccccccccccCCcccccc--------------
Q 045539 156 SINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALK--EIYLLNNSLSGSLPSRIDLS-------------- 219 (897)
Q Consensus 156 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~L~L~~N~l~~~~p~~~~~~-------------- 219 (897)
++|++++..+..+..+++|++|++++|+++++.|..|+++++|+ +|++++|++++..|..+...
T Consensus 137 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~ 216 (606)
T 3t6q_A 137 GSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLL 216 (606)
T ss_dssp CSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHH
T ss_pred CCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHH
Confidence 99999974445555699999999999999999999999999999 89999999996555443210
Q ss_pred ----------------------------------c--cccceeecccccccccccccccCCCcccEEEccccccccccCc
Q 045539 220 ----------------------------------L--PNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPN 263 (897)
Q Consensus 220 ----------------------------------l--~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 263 (897)
+ .+|+.|++++|.+++..+..|.++++|++|++++|.++.. |.
T Consensus 217 ~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~l-p~ 295 (606)
T 3t6q_A 217 VIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSEL-PS 295 (606)
T ss_dssp HHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCC-CS
T ss_pred HHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCC-Ch
Confidence 0 1566777777777766666677777777777777777632 32
Q ss_pred cccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCc-cccCccCCc
Q 045539 264 TFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQ-VVGNLGNLL 342 (897)
Q Consensus 264 ~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~-~~~~l~~L~ 342 (897)
.+.++++|++|++++|++.+..|..+..++ +|++|++++|.+.+.+|. .+..+++|+
T Consensus 296 ---------------------~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 353 (606)
T 3t6q_A 296 ---------------------GLVGLSTLKKLVLSANKFENLCQISASNFP-SLTHLSIKGNTKRLELGTGCLENLENLR 353 (606)
T ss_dssp ---------------------SCCSCTTCCEEECTTCCCSBGGGGCGGGCT-TCSEEECCSCSSCCBCCSSTTTTCTTCC
T ss_pred ---------------------hhcccccCCEEECccCCcCcCchhhhhccC-cCCEEECCCCCcccccchhhhhccCcCC
Confidence 356789999999999999998888888887 899999999999876654 599999999
Q ss_pred EEEccCCCCCCCc--cccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcc-cccccccceeccc
Q 045539 343 VLELGGNNLTEPI--PITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSC-LGNLTSLRVLYLG 419 (897)
Q Consensus 343 ~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~ 419 (897)
+|++++|++++.. +..+..+++|++|++++|++.+..|..|..+++|++|++++|++++..|.. +.++++|+.|+++
T Consensus 354 ~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 433 (606)
T 3t6q_A 354 ELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLS 433 (606)
T ss_dssp EEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECT
T ss_pred EEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECC
Confidence 9999999999866 778999999999999999999988999999999999999999999876654 8999999999999
Q ss_pred cccccCCccccccccccceEEeecCCccc--------------ccceeecccCcCCCCCcccccCCcccccccccCceec
Q 045539 420 LNRFTSALPSTIWNLKDILFIDVSSNSLN--------------VLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLE 485 (897)
Q Consensus 420 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~--------------~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~ 485 (897)
+|.+++..|..+..+++|++|++++|.++ .|+.|++++|++++.+|..++.+++|++|+|++|+++
T Consensus 434 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 513 (606)
T 3t6q_A 434 HSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLT 513 (606)
T ss_dssp TCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccC
Confidence 99999989999999999999999999763 4788999999999999999999999999999999999
Q ss_pred ccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcccccCC
Q 045539 486 GSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIP 537 (897)
Q Consensus 486 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 537 (897)
+..|..|.++++| .|+|++|++++.+|..+..+++|+.|++++|++.+..+
T Consensus 514 ~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 514 SSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp GGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9999999999999 99999999999999999999999999999999987654
No 10
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.7e-52 Score=443.43 Aligned_cols=254 Identities=27% Similarity=0.434 Sum_probs=211.1
Q ss_pred cCCCcCCeeecccceEEEEEEec------CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQ------DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
++|.+.+.||+|+||+||+|++. +++.||||+++.......+.|.+|++++++++|||||+++|+|.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 57888999999999999999864 478899999987766677889999999999999999999999999999999
Q ss_pred EEEeccCCChhHhhhcCC------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEE
Q 045539 691 IMKYMPNGSLENCLYSGT------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHI 758 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL 758 (897)
|||||++|+|.++++..+ ..+++.++..|+.||++||+|| |+++|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997542 4689999999999999999999 7899999999999999999999999
Q ss_pred eeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcC
Q 045539 759 SDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLL 837 (897)
Q Consensus 759 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 837 (897)
+|||+|+.....+.........||+.|||||++.+..++.++|||||||++|||+| |+.||......
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~------------ 237 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------------ 237 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------------
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------------
Confidence 99999987655444444444569999999999999999999999999999999999 89999763211
Q ss_pred CchHHHHhhhh-hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 838 PVSVMEVIDTN-LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 838 ~~~~~~~i~~~-l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
++...+... ....+ +.+..++.+++.+||+.|| ++|||++||.+.|++
T Consensus 238 --~~~~~i~~~~~~~~p-------~~~~~~~~~li~~cl~~dP-~~RPs~~~i~~~L~~ 286 (299)
T 4asz_A 238 --EVIECITQGRVLQRP-------RTCPQEVYELMLGCWQREP-HMRKNIKGIHTLLQN 286 (299)
T ss_dssp --HHHHHHHHTCCCCCC-------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred --HHHHHHHcCCCCCCC-------ccchHHHHHHHHHHcCCCh-hHCcCHHHHHHHHHH
Confidence 111111111 11111 1234568899999999999 999999999988853
No 11
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.8e-50 Score=488.42 Aligned_cols=462 Identities=23% Similarity=0.244 Sum_probs=361.7
Q ss_pred eEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEee
Q 045539 77 RVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLS 156 (897)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 156 (897)
+++.|+|++|.+++..|.+++++++|++|+|++|++++..+..|+++++|++|+|++|++.+..+..|.++++|++|||+
T Consensus 50 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 129 (680)
T 1ziw_A 50 QLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLS 129 (680)
T ss_dssp TCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECC
T ss_pred cCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECC
Confidence 57788888888888778888888888888888888885555568888888888888888887777888888888888888
Q ss_pred ecCCCCCCCccccCccccccccccccccccccccccc--ccccccccccccccccccCCccc------------------
Q 045539 157 INGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIF--NMSALKEIYLLNNSLSGSLPSRI------------------ 216 (897)
Q Consensus 157 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~------------------ 216 (897)
+|.+++..|..++++++|++|++++|++++..+..+. ++++|++|++++|++++..|..+
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~ 209 (680)
T 1ziw_A 130 HNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGP 209 (680)
T ss_dssp SSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHH
T ss_pred CCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccCh
Confidence 8888877778888888888888888888877776554 44777777777777765444321
Q ss_pred --------------------------------cccc--cccceeecccccccccccccccCCCcccEEEccccccccccC
Q 045539 217 --------------------------------DLSL--PNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIP 262 (897)
Q Consensus 217 --------------------------------~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 262 (897)
+..+ ++|++|+|++|.+++..|..|..+++|++|++++|.+++..|
T Consensus 210 ~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 289 (680)
T 1ziw_A 210 SLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFS 289 (680)
T ss_dssp HHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECT
T ss_pred hhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccCh
Confidence 1122 237777777777777777777777777777777777777766
Q ss_pred cccccccc---ccccCCCCc----ccccc-----cccccCCCcEEEecCCCCCCCCCCcccCch----------------
Q 045539 263 NTFVNMAD---NYLTSSTPE----LSFLS-----SLTNCKKLKVLILTGNPLDGILPKSKGNLS---------------- 314 (897)
Q Consensus 263 ~~f~~l~~---~~l~~~~~~----~~~l~-----~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~---------------- 314 (897)
..|..+.. ..+...... ...++ .+..+++|++|++++|++.++.|..+..++
T Consensus 290 ~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~ 369 (680)
T 1ziw_A 290 HSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRT 369 (680)
T ss_dssp TTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCE
T ss_pred hhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhh
Confidence 66544321 111110000 00011 456778888888888888887776665554
Q ss_pred -----------HHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCcc-ccccCccchhhhcccCcccccccchh
Q 045539 315 -----------LSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIP-ITFSQLQTLQALGLTRNKLAGPITDE 382 (897)
Q Consensus 315 -----------~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~ 382 (897)
.+|+.|++++|++++..|.+|..+++|++|++++|++++.+| ..|.++++|++|++++|++.+..+..
T Consensus 370 l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 449 (680)
T 1ziw_A 370 LTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNS 449 (680)
T ss_dssp ECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTT
T ss_pred cchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhh
Confidence 134455556677777778888888888888888888876444 67888888888888888888888888
Q ss_pred hhcccccccccccccccc--cCCCcccccccccceeccccccccCCccccccccccceEEeecCCccc------------
Q 045539 383 LCHLARLHSLVLQGNKFS--GSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLN------------ 448 (897)
Q Consensus 383 ~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~------------ 448 (897)
|..+++|+.|++++|.++ +.+|..+.++++|+.|++++|++++..|..+..+++|++|++++|.++
T Consensus 450 ~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 529 (680)
T 1ziw_A 450 FALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPI 529 (680)
T ss_dssp TTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCC
T ss_pred hhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcc
Confidence 888888999999988886 578899999999999999999999888888999999999999999764
Q ss_pred -------ccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhh-hhc
Q 045539 449 -------VLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQ-KLL 520 (897)
Q Consensus 449 -------~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~ 520 (897)
.|+.|+|++|+++...+..|+++++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..|..+. .++
T Consensus 530 ~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 609 (680)
T 1ziw_A 530 YFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFR 609 (680)
T ss_dssp CTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHT
T ss_pred hhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhccccc
Confidence 467899999999965556799999999999999999987777789999999999999999988888888 899
Q ss_pred ccceEeccCCcccccCCC
Q 045539 521 YLKHLNLSFNKLEGEIPR 538 (897)
Q Consensus 521 ~L~~L~ls~N~l~~~~p~ 538 (897)
+|+.|+|++|++.+..+.
T Consensus 610 ~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 610 NLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCSEEECTTCCCCBCCCC
T ss_pred ccCEEEccCCCcccCCcc
Confidence 999999999999987653
No 12
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.4e-51 Score=444.14 Aligned_cols=255 Identities=25% Similarity=0.400 Sum_probs=203.4
Q ss_pred cCCCcCCeeecccceEEEEEEec------CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQ------DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
++|.+.+.||+|+||+||+|++. +++.||||+++.......+.|.+|++++++++|||||+++|+|.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 46778899999999999999864 478899999987766677889999999999999999999999999999999
Q ss_pred EEEeccCCChhHhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcE
Q 045539 691 IMKYMPNGSLENCLYSGT--------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVA 756 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~ 756 (897)
|||||++|+|.++++... .++++.++..|+.||++||+|| |+++|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecccccHhhEEECCCCcE
Confidence 999999999999987542 3589999999999999999999 78999999999999999999999
Q ss_pred EEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhh
Q 045539 757 HISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWIND 835 (897)
Q Consensus 757 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 835 (897)
||+|||+|+.....+.........||+.|||||++.+..++.++|||||||++|||+| |+.||...... .
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~------- 268 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--E------- 268 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--H-------
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--H-------
Confidence 9999999987755544444456679999999999999999999999999999999999 89999763211 1
Q ss_pred cCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 836 LLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 836 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
+...+........+ +.+..++.+++.+||+.|| ++|||++||+++|++
T Consensus 269 -----~~~~i~~g~~~~~p------~~~~~~~~~li~~cl~~dP-~~RPs~~ei~~~L~~ 316 (329)
T 4aoj_A 269 -----AIDCITQGRELERP------RACPPEVYAIMRGCWQREP-QQRHSIKDVHARLQA 316 (329)
T ss_dssp -----HHHHHHHTCCCCCC------TTCCHHHHHHHHHHCCSST-TTSCCHHHHHHHHHH
T ss_pred -----HHHHHHcCCCCCCc------ccccHHHHHHHHHHcCcCh-hHCcCHHHHHHHHHH
Confidence 11111111100110 1234568899999999999 999999999998853
No 13
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-51 Score=435.13 Aligned_cols=256 Identities=25% Similarity=0.416 Sum_probs=201.0
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQ--YERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
.++|.+.++||+|+||+||+|++. ..||||+++.. ..+..+.|.+|++++++++|||||+++|++.+ +..|+|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 467888999999999999999876 36999998643 24556789999999999999999999999865 46799999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
||++|+|.+++......+++.++..|+.|||+||+|| |+++||||||||+|||+++++.+||+|||+|+........
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yL---H~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 9999999999987777799999999999999999999 7899999999999999999999999999999876544433
Q ss_pred eeeeccccCcccCCcCccC---CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 774 SIQIQTLATIGYMAPEYGT---KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
.......||+.|||||++. .+.++.++|||||||++|||+||+.||....... .. ...+.....
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~------------~~~~~~~~~ 255 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QI------------IFMVGRGYA 255 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HH------------HHHHHTTCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HH------------HHHHhcCCC
Confidence 3445668999999999874 3468999999999999999999999997532110 11 111111110
Q ss_pred c-hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 851 R-GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 851 ~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
. ... .....+..++.+++.+||+.|| ++|||++||++.|+
T Consensus 256 ~p~~~---~~~~~~~~~l~~li~~cl~~dP-~~RPs~~ei~~~Le 296 (307)
T 3omv_A 256 SPDLS---KLYKNCPKAMKRLVADCVKKVK-EERPLFPQILSSIE 296 (307)
T ss_dssp CCCST---TSCTTSCHHHHHHHHHHTCSSS-TTSCCHHHHHHHHH
T ss_pred CCCcc---cccccchHHHHHHHHHHcCCCH-hHCcCHHHHHHHHH
Confidence 0 000 0011234568899999999999 99999999998874
No 14
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.8e-51 Score=437.59 Aligned_cols=254 Identities=25% Similarity=0.379 Sum_probs=209.3
Q ss_pred cCCCcCCeeecccceEEEEEEec------CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceE
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQ------DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKA 689 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 689 (897)
+++++.+.||+|+||+||+|++. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 35667789999999999999863 46889999997543 334578999999999999999999999999999999
Q ss_pred EEEEeccCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC
Q 045539 690 LIMKYMPNGSLENCLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM 754 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~ 754 (897)
+|||||++|+|.+++.... ..+++.++..|+.|||+||+|| |+++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCCCCCCccccceEECCCC
Confidence 9999999999999996532 3589999999999999999999 789999999999999999999
Q ss_pred cEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHh
Q 045539 755 VAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWI 833 (897)
Q Consensus 755 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~ 833 (897)
.+||+|||+|+.....+.........||+.|||||++.++.++.++|||||||++|||+| |+.||...... .
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~----- 255 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--D----- 255 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--H-----
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--H-----
Confidence 999999999987654444334455679999999999999999999999999999999999 89999763211 1
Q ss_pred hhcCCchHHHHhhhh-hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 834 NDLLPVSVMEVIDTN-LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 834 ~~~~~~~~~~~i~~~-l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
+.+.+... ....+ +.++.++.+++.+||+.|| ++|||++||+++|++
T Consensus 256 -------~~~~i~~~~~~~~p-------~~~~~~~~~li~~C~~~dP-~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 256 -------VVEMIRNRQVLPCP-------DDCPAWVYALMIECWNEFP-SRRPRFKDIHSRLRA 303 (308)
T ss_dssp -------HHHHHHTTCCCCCC-------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHT
T ss_pred -------HHHHHHcCCCCCCc-------ccchHHHHHHHHHHcCCCh-hHCcCHHHHHHHHHh
Confidence 11111111 11111 2344568899999999999 999999999999975
No 15
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.9e-51 Score=480.83 Aligned_cols=459 Identities=21% Similarity=0.258 Sum_probs=309.5
Q ss_pred CcceeeeEeeCCC-----------CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEec
Q 045539 63 VCSWIGITCDVNS-----------HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYF 131 (897)
Q Consensus 63 ~c~w~gv~c~~~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 131 (897)
.|.|.|| |+... .+++.|+|++|++++..|.+++++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5999999 97431 36888999999999888888999999999999999999888888999999999999
Q ss_pred cCccccCCccccccccccccEEEeeecCCCC-CCCccccCccccccccccccc-cccccccccccccccccccccccccc
Q 045539 132 SDNQLFGSLSFFIFNVSSVTTIDLSINGLSG-EMPREIGNLPYLARLAFATNN-LVGVAPVTIFNMSALKEIYLLNNSLS 209 (897)
Q Consensus 132 s~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~-~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~ 209 (897)
++|++.+.++..|+++++|++|+|++|++++ .+|..++++++|++|++++|+ +..+.+..|.++++|++|++++|+++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999998888889999999999999999986 457788999999999999998 55565578899999999999999998
Q ss_pred ccCCccccccccccceeecccccccccccccccCCCcccEEEcccccccccc--Ccc----cccc-----ccccccCCCC
Q 045539 210 GSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFI--PNT----FVNM-----ADNYLTSSTP 278 (897)
Q Consensus 210 ~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~--~~~----f~~l-----~~~~l~~~~~ 278 (897)
+.+|..+. .+++|++|++++|.+.......+..+++|++|++++|.+++.. |.. ...+ ..|.+....+
T Consensus 162 ~~~~~~l~-~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 240 (549)
T 2z81_A 162 NYQSQSLK-SIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESF 240 (549)
T ss_dssp EECTTTTT-TCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHH
T ss_pred ccChhhhh-ccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHH
Confidence 77777665 6888899999888876443334456888999999999888752 111 1111 1111111000
Q ss_pred cccccccccccCCCcEEEecCCCCCCCCC------CcccCchHHHHHHHhccCCCCCC-----cCccccCccCCcEEEcc
Q 045539 279 ELSFLSSLTNCKKLKVLILTGNPLDGILP------KSKGNLSLSLEIILMDNCSISGN-----IPQVVGNLGNLLVLELG 347 (897)
Q Consensus 279 ~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p------~~~~~l~~~L~~L~l~~n~l~~~-----~p~~~~~l~~L~~L~L~ 347 (897)
. .....+..+++|+.|++++|.+.+... ..+..+. +++.|.+.++.+... ++..+...++|+.|+++
T Consensus 241 ~-~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~-~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~ 318 (549)
T 2z81_A 241 N-ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELG-KVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVE 318 (549)
T ss_dssp H-HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCT-TCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEE
T ss_pred H-HHHHHhhhhccccccccccccccccccccccchhhhhhhc-ccccccccccccchhhhcccchhhhhhcccceEEEec
Confidence 0 011223456677777777776655311 1112222 455566666655431 12223345678888888
Q ss_pred CCCCCCCccccc-cCccchhhhcccCcccccccch---hhhcccccccccccccccccCCC--cccccccccceeccccc
Q 045539 348 GNNLTEPIPITF-SQLQTLQALGLTRNKLAGPITD---ELCHLARLHSLVLQGNKFSGSIP--SCLGNLTSLRVLYLGLN 421 (897)
Q Consensus 348 ~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N 421 (897)
+|+++. +|..+ ..+++|++|+|++|++++.+|. .+..+++|++|+|++|++++..+ ..+..+++|++|++++|
T Consensus 319 ~n~l~~-ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N 397 (549)
T 2z81_A 319 NSKVFL-VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRN 397 (549)
T ss_dssp SSCCCC-CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTC
T ss_pred cCcccc-CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCC
Confidence 888875 44443 5678888888888888876643 36677888888888888875432 45777888888888888
Q ss_pred cccCCccccccccccceEEeecCCccc--------ccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCC
Q 045539 422 RFTSALPSTIWNLKDILFIDVSSNSLN--------VLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFG 493 (897)
Q Consensus 422 ~l~~~~p~~~~~l~~L~~L~ls~N~l~--------~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 493 (897)
+++ .+|..+..+++|++|++++|.++ .|+.|++++|++++.+ ..+++|++|+|++|+|+ .+|. ..
T Consensus 398 ~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~ 470 (549)
T 2z81_A 398 TFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-AS 470 (549)
T ss_dssp CCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GG
T ss_pred CCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cc
Confidence 887 47777777788887777777663 3444455555444422 24444555555555554 3443 23
Q ss_pred CcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCccc
Q 045539 494 DLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLE 533 (897)
Q Consensus 494 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 533 (897)
.+++|++|||++|+|++.+|..+..+++|+.|+|++|++.
T Consensus 471 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 510 (549)
T 2z81_A 471 LFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510 (549)
T ss_dssp GCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBC
T ss_pred cCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCcc
Confidence 4445555555555555444444445555555555555443
No 16
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.2e-51 Score=432.46 Aligned_cols=249 Identities=26% Similarity=0.358 Sum_probs=209.2
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||+||+|+.. +|+.||||++.+.. ....+.+.+|++++++++|||||++++++++++..|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 357999999999999999999875 69999999997653 23457889999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||++||+|.+++...+ .+++.++..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+.+....
T Consensus 111 mEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYL---HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 99999999999997654 599999999999999999999 89999999999999999999999999999999876554
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+++...+..
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----------------~~~~~~i~~~ 249 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----------------GLIFAKIIKL 249 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------------HHHHHHHHHT
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----------------HHHHHHHHcC
Confidence 44445567899999999999999999999999999999999999999975211 1111111111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHH
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIF 890 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl 890 (897)
.+. .+ +.+..++.+++.+|++.|| ++|||++|++
T Consensus 250 ~~~-~p---~~~s~~~~dli~~lL~~dp-~~R~t~~e~~ 283 (311)
T 4aw0_A 250 EYD-FP---EKFFPKARDLVEKLLVLDA-TKRLGCEEME 283 (311)
T ss_dssp CCC-CC---TTCCHHHHHHHHHHSCSSG-GGSTTSGGGT
T ss_pred CCC-CC---cccCHHHHHHHHHHccCCH-hHCcChHHHc
Confidence 110 00 1123457899999999999 9999999864
No 17
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.1e-50 Score=437.73 Aligned_cols=249 Identities=24% Similarity=0.314 Sum_probs=208.0
Q ss_pred cCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEec
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKYM 695 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 695 (897)
+.|+..++||+|+||+||+|++. +|+.||||++........+.+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46999999999999999999876 69999999997665555567889999999999999999999999999999999999
Q ss_pred cCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCceee
Q 045539 696 PNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSI 775 (897)
Q Consensus 696 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~ 775 (897)
+||+|.+++... .+++.++..++.||+.||+|| |++||+||||||+|||++.+|.+||+|||+|+....... .
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--C
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--c
Confidence 999999999875 489999999999999999999 899999999999999999999999999999987654322 2
Q ss_pred eeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhh
Q 045539 776 QIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEER 855 (897)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 855 (897)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+....+. .+
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~~~--------~~------ 290 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPP--------RL------ 290 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSSCC--------CC------
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCCC--------CC------
Confidence 3456899999999999999999999999999999999999999975211 1111111111110 00
Q ss_pred hHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 856 FFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 856 ~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.....+..++.+++.+||+.|| ++|||++|+++
T Consensus 291 --~~~~~~s~~~~dli~~~L~~dP-~~R~ta~e~l~ 323 (346)
T 4fih_A 291 --KNLHKVSPSLKGFLDRLLVRDP-AQRATAAELLK 323 (346)
T ss_dssp --SCGGGSCHHHHHHHHHHSCSST-TTSCCHHHHTT
T ss_pred --CccccCCHHHHHHHHHHcCCCh-hHCcCHHHHhc
Confidence 0011233457899999999999 99999999986
No 18
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8e-51 Score=439.47 Aligned_cols=250 Identities=20% Similarity=0.332 Sum_probs=201.8
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
.++|++.+.||+|+||+||+|++. +|+.||||++++.. ....+.+.+|++++++++|||||++++++++++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 368999999999999999999875 69999999997542 445678999999999999999999999999999999999
Q ss_pred EeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 693 KYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+||+|.+++.... ..+++.++..|+.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV---HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 9999999999997544 4579999999999999999999 89999999999999999999999999999998764221
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+++...+..
T Consensus 180 --~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----------------~~~~~~i~~~ 240 (350)
T 4b9d_A 180 --ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-----------------KNLVLKIISG 240 (350)
T ss_dssp --HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----------------HHHHHHHHHT
T ss_pred --ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----------------HHHHHHHHcC
Confidence 122345799999999999999999999999999999999999999975211 1111111111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.++.. ...+..++.+++.+||+.|| ++|||++|+++
T Consensus 241 ~~~~~---~~~~s~~~~~li~~~L~~dP-~~R~s~~e~l~ 276 (350)
T 4b9d_A 241 SFPPV---SLHYSYDLRSLVSQLFKRNP-RDRPSVNSILE 276 (350)
T ss_dssp CCCCC---CTTSCHHHHHHHHHHTCSSG-GGSCCHHHHHT
T ss_pred CCCCC---CccCCHHHHHHHHHHccCCh-hHCcCHHHHhc
Confidence 11000 01223457899999999999 99999999976
No 19
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.2e-50 Score=478.65 Aligned_cols=452 Identities=19% Similarity=0.169 Sum_probs=384.4
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEe
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDL 155 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 155 (897)
.++..|+|++|++++..|.+|+++++|++|+|++|.+++..|..|+++++|++|+|++|++.+..+..++++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 46889999999999988999999999999999999999888999999999999999999999999899999999999999
Q ss_pred eecCCCC-CCCccccCccccccccccccccccccccccccccccc----ccccccccccccCCccccccccccceeeccc
Q 045539 156 SINGLSG-EMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALK----EIYLLNNSLSGSLPSRIDLSLPNVETLNLGI 230 (897)
Q Consensus 156 s~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~ 230 (897)
++|.+++ .+|..|+++++|++|++++|+++++.+..|+.+++|+ +|++++|+++ .+|...+.. .+|+.|++++
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~-~~~~~~~~~-~~L~~L~L~~ 213 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQG-IKLHELTLRG 213 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCC-EECTTTTTT-CEEEEEEEES
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcc-eeCcccccC-ceeeeeeccC
Confidence 9999986 6799999999999999999999999999999998876 7999999998 667666644 4899999999
Q ss_pred cccc-ccccccccCCCcccEEEc---------------------------------cccccccccCcccccccc-ccccC
Q 045539 231 NSFY-GTVPSSITNASKLSDLEL---------------------------------GVNLFSGFIPNTFVNMAD-NYLTS 275 (897)
Q Consensus 231 N~l~-~~~p~~l~~l~~L~~L~L---------------------------------~~N~l~~~~~~~f~~l~~-~~l~~ 275 (897)
|.+. +..|..+.++++|+.+++ ..|.+++..|. |..+.. ..+..
T Consensus 214 n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l 292 (606)
T 3vq2_A 214 NFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSL 292 (606)
T ss_dssp CCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEE
T ss_pred CccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEe
Confidence 9886 455666777777766665 44455555554 332221 01111
Q ss_pred CCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCc
Q 045539 276 STPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPI 355 (897)
Q Consensus 276 ~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 355 (897)
.......++.+..+++|++|++++|++ +.+| .+ .++ +|+.|++++|...+.. .+..+++|++|++++|++++..
T Consensus 293 ~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~-~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~ 366 (606)
T 3vq2_A 293 AGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFP-TL-DLP-FLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSG 366 (606)
T ss_dssp ESCCCCCCCCCCTTCCCSEEEEESCCC-SSCC-CC-CCS-SCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEE
T ss_pred cCccchhhhhccccccCCEEEcccccC-cccc-cC-CCC-ccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCc
Confidence 111122233577888999999999999 5667 44 565 8899999999665544 6778999999999999998753
Q ss_pred --cccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCC-cccccccccceeccccccccCCcccccc
Q 045539 356 --PITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIP-SCLGNLTSLRVLYLGLNRFTSALPSTIW 432 (897)
Q Consensus 356 --~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 432 (897)
|..+..+++|++|++++|++++ +|..+..+++|++|++++|++++..| ..+.++++|+.|++++|.+++..|..+.
T Consensus 367 ~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 445 (606)
T 3vq2_A 367 CCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFL 445 (606)
T ss_dssp ECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred chhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhc
Confidence 7788899999999999999885 66888899999999999999998777 6888999999999999999988899999
Q ss_pred ccccceEEeecCCccc------------ccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcE
Q 045539 433 NLKDILFIDVSSNSLN------------VLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEV 500 (897)
Q Consensus 433 ~l~~L~~L~ls~N~l~------------~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 500 (897)
++++|++|++++|.+. .|+.|++++|++++.+|..++.+++|++|++++|++++.+|..|.++++|+.
T Consensus 446 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 525 (606)
T 3vq2_A 446 GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525 (606)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCE
T ss_pred CCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCE
Confidence 9999999999998653 4778999999999999999999999999999999999999999999999999
Q ss_pred EeccCCccCCCCchhhhhhc-ccceEeccCCcccccCCC
Q 045539 501 LDLSKNKISGAIPASLQKLL-YLKHLNLSFNKLEGEIPR 538 (897)
Q Consensus 501 L~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p~ 538 (897)
|||++|+|+ .+|..+..++ +|+.|++++|++.+..+.
T Consensus 526 L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 526 LDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp EECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred EECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 999999999 7888899997 599999999999886653
No 20
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-49 Score=486.41 Aligned_cols=450 Identities=23% Similarity=0.198 Sum_probs=370.3
Q ss_pred EEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCc-cccccccccccEEEeeecC
Q 045539 81 LNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSL-SFFIFNVSSVTTIDLSING 159 (897)
Q Consensus 81 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~LdLs~N~ 159 (897)
.|.++++++ .+|. ..++|++|||++|.|++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.
T Consensus 9 ~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 9 AFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 456778888 5666 4689999999999999989999999999999999999766665 8889999999999999999
Q ss_pred CCCCCCccccCccccccccccccccccccccc--ccccccccccccccccccccCCccccccccccceeecccccccccc
Q 045539 160 LSGEMPREIGNLPYLARLAFATNNLVGVAPVT--IFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTV 237 (897)
Q Consensus 160 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~ 237 (897)
+.+..|..|+++++|++|+|++|.+++..|.. |.++++|++|+|++|++++..+...+..+++|++|+|++|.+++..
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 99888999999999999999999999866654 9999999999999999997766666679999999999999999999
Q ss_pred cccccCC--CcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccC---
Q 045539 238 PSSITNA--SKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGN--- 312 (897)
Q Consensus 238 p~~l~~l--~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~--- 312 (897)
+..+..+ ++|+.|+++.|.+.+..|..+..... .+.+ .+|++|++++|++.+..|..+..
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~--------------~~~~-~~L~~L~Ls~n~l~~~~~~~~~~~l~ 229 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMN--------------PFRN-MVLEILDVSGNGWTVDITGNFSNAIS 229 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSC--------------TTTT-CCBSEEBCSSCCSSTTTTSGGGGTSC
T ss_pred HHHcccccCCccceEECCCCccccccccchhhcCC--------------cccc-CceeEEecCCCcCchhHHHHHHhhcC
Confidence 9999988 89999999999999877765422110 0111 24777777777666555543332
Q ss_pred ---------------------------------c-hHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCcccc
Q 045539 313 ---------------------------------L-SLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPIT 358 (897)
Q Consensus 313 ---------------------------------l-~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 358 (897)
+ ..+|+.|++++|.+++..|..|..+++|+.|+|++|++++..|..
T Consensus 230 ~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 309 (844)
T 3j0a_A 230 KSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEA 309 (844)
T ss_dssp SCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTT
T ss_pred cccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHH
Confidence 1 136888899999999888899999999999999999999888888
Q ss_pred ccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccce
Q 045539 359 FSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDIL 438 (897)
Q Consensus 359 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 438 (897)
|.++++|++|+|++|++++..|..|..+++|++|++++|++++..+..|.++++|+.|+|++|.+++. +. +++|+
T Consensus 310 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~~----~~~L~ 384 (844)
T 3j0a_A 310 FYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-HF----IPSIP 384 (844)
T ss_dssp TTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-SS----CCSCS
T ss_pred hcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-cC----CCCcc
Confidence 99999999999999999988888999999999999999999877778889999999999999998852 22 45555
Q ss_pred EEeecCCcc--------------------------------cccceeecccCcCCCCCcc-cccCCcccccccccCceec
Q 045539 439 FIDVSSNSL--------------------------------NVLIGLNFSRNNLSGDIPI-TIGGLKNLQQMFLEYNRLE 485 (897)
Q Consensus 439 ~L~ls~N~l--------------------------------~~l~~l~ls~n~l~~~~p~-~~~~l~~L~~L~ls~N~l~ 485 (897)
.|++++|++ +.|+.|+|++|++++..+. .+..+++|+.|+|++|.++
T Consensus 385 ~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~ 464 (844)
T 3j0a_A 385 DIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQ 464 (844)
T ss_dssp EEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCS
T ss_pred hhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccc
Confidence 555555533 3456677777777765443 3556788888888888886
Q ss_pred -----ccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcccccCCCCCCCCCCCcccccchhh
Q 045539 486 -----GSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIPRGGPFANLTAKSFMGNEL 555 (897)
Q Consensus 486 -----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~ 555 (897)
+..|..|.++++|+.|+|++|+|++..|..+..+++|+.|+|++|++++.+|...+ .++..+.+.+|..
T Consensus 465 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l 538 (844)
T 3j0a_A 465 LAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQL 538 (844)
T ss_dssp SSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECC
T ss_pred cccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcC
Confidence 44556789999999999999999998899999999999999999999987766444 6777788888854
No 21
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.8e-49 Score=438.87 Aligned_cols=249 Identities=24% Similarity=0.314 Sum_probs=207.7
Q ss_pred cCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEec
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKYM 695 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 695 (897)
+.|+..+.||+|+||.||+|++. +|+.||||++........+.+.+|+++|++++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 57999999999999999999876 69999999997665555567889999999999999999999999999999999999
Q ss_pred cCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCceee
Q 045539 696 PNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSI 775 (897)
Q Consensus 696 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~ 775 (897)
+||+|.+++.... +++.++..++.||+.||+|| |++|||||||||+|||++.+|.+||+|||+|+.+..... .
T Consensus 231 ~gG~L~~~i~~~~--l~e~~~~~~~~qil~aL~yl---H~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 303 (423)
T 4fie_A 231 EGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 303 (423)
T ss_dssp TTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--C
T ss_pred CCCcHHHHHhccC--CCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--c
Confidence 9999999997654 89999999999999999999 889999999999999999999999999999987654322 2
Q ss_pred eeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhh
Q 045539 776 QIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEER 855 (897)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 855 (897)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ......+....+. .+.
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~~~--------~~~----- 368 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPP--------RLK----- 368 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSCCC--------CCS-----
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCCC--------CCc-----
Confidence 3456799999999999999999999999999999999999999975211 1111111111110 000
Q ss_pred hHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 856 FFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 856 ~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
....+..++.+++.+||+.|| ++|||++|+++
T Consensus 369 ---~~~~~s~~~~dli~~~L~~dP-~~R~ta~ell~ 400 (423)
T 4fie_A 369 ---NLHKVSPSLKGFLDRLLVRDP-AQRATAAELLK 400 (423)
T ss_dssp ---CTTSSCHHHHHHHHHHSCSST-TTSCCHHHHTT
T ss_pred ---ccccCCHHHHHHHHHHcCCCh-hHCcCHHHHhc
Confidence 011223457899999999999 99999999986
No 22
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.6e-50 Score=430.45 Aligned_cols=250 Identities=21% Similarity=0.208 Sum_probs=201.9
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
.+.|+..++||+|+||+||+|++. +|+.||||+++... ...+|+.++++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 456888899999999999999875 69999999997642 224799999999999999999999999999999999
Q ss_pred ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC-cEEEeeccCccccCCCCce
Q 045539 695 MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM-VAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 695 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~-~~kL~DFg~a~~~~~~~~~ 773 (897)
|+||+|.+++...+ .+++.++..++.||+.||+|| |++||+||||||+|||++.+| .+||+|||+|+........
T Consensus 132 ~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYL---HTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 99999999997654 599999999999999999999 899999999999999999988 6999999999877543221
Q ss_pred e---eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 774 S---IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 774 ~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
. .....+||+.|||||++.+..++.++||||+||++|||+||+.||......+ ..........+ ..
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~~~----------~~ 276 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIASEPPP----------IR 276 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHHHSCCG----------GG
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHcCCCC----------ch
Confidence 1 1233579999999999999999999999999999999999999997633221 11111111000 00
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhc
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSAL 893 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L 893 (897)
.-+ ..+...+.+++.+||+.|| ++|||++|+++.|
T Consensus 277 ~~~-------~~~s~~~~~li~~~L~~dP-~~R~sa~el~~~l 311 (336)
T 4g3f_A 277 EIP-------PSCAPLTAQAIQEGLRKEP-VHRASAMELRRKV 311 (336)
T ss_dssp GSC-------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHH
T ss_pred hcC-------ccCCHHHHHHHHHHccCCH-hHCcCHHHHHHHH
Confidence 000 1233457899999999999 9999999998875
No 23
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-49 Score=463.69 Aligned_cols=459 Identities=19% Similarity=0.177 Sum_probs=346.1
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEe
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDL 155 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 155 (897)
.++..|+|++|++++..+.+|+++++|++|||++|++++..|..|+++++|++|+|++|++.+..+..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46889999999999888889999999999999999999888889999999999999999999999999999999999999
Q ss_pred eecCCCCCCCccccCccccccccccccccccc-ccccccccccccccccccccccccCCcccccccccc----ceeeccc
Q 045539 156 SINGLSGEMPREIGNLPYLARLAFATNNLVGV-APVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNV----ETLNLGI 230 (897)
Q Consensus 156 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L----~~L~L~~ 230 (897)
++|++++..+..|+++++|++|++++|+++++ .|..|+++++|++|++++|++++ ++...+..+++| +.|++++
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS-IYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCE-ECGGGGHHHHTCTTCCCEEECTT
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccce-ecHHHccchhccchhhhhcccCC
Confidence 99999965556799999999999999999985 58899999999999999999985 444444467777 8999999
Q ss_pred ccccccccccccCCCcccEEEccccccccc-cCcccccccc-----------------------------------cccc
Q 045539 231 NSFYGTVPSSITNASKLSDLELGVNLFSGF-IPNTFVNMAD-----------------------------------NYLT 274 (897)
Q Consensus 231 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~~~~f~~l~~-----------------------------------~~l~ 274 (897)
|.+++..|..+..+ +|+.|++++|..... .+..+..+.. ..+.
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 99998888888776 899999998843211 1111111100 0000
Q ss_pred CC-CCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCC
Q 045539 275 SS-TPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTE 353 (897)
Q Consensus 275 ~~-~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 353 (897)
.. .........+..+++|++|++++|++.+ +|..+..+ +|+.|++.+|.++ .+|. ..+++|+.|++++|.+.+
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~--~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF--GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC--CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCC
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC--CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccc
Confidence 00 0000111235566777777777777764 55555555 6777777777777 3443 456777777777777766
Q ss_pred CccccccCccchhhhcccCccccccc--chhhhcccccccccccccccccCCCcccccccccceeccccccccCCcc-cc
Q 045539 354 PIPITFSQLQTLQALGLTRNKLAGPI--TDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALP-ST 430 (897)
Q Consensus 354 ~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~ 430 (897)
..+. ..+++|++|++++|++++.. +..+..+++|++|++++|++++..+. +..+++|+.|++++|.+++..| ..
T Consensus 340 ~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~ 416 (570)
T 2z63_A 340 AFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSV 416 (570)
T ss_dssp BCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCT
T ss_pred cccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhh
Confidence 5443 56777777777777777543 56677777777777777777744333 7777777777777777776555 45
Q ss_pred ccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceec-ccCCCCCCCcCCCcEEeccCCccC
Q 045539 431 IWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLE-GSIPESFGDLSSLEVLDLSKNKIS 509 (897)
Q Consensus 431 ~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~ 509 (897)
+..+++|+ .|++++|.+++.+|..+..+++|++|++++|+++ +.+|..+..+++|++|+|++|+++
T Consensus 417 ~~~l~~L~-------------~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~ 483 (570)
T 2z63_A 417 FLSLRNLI-------------YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE 483 (570)
T ss_dssp TTTCTTCC-------------EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCC
T ss_pred hhcCCCCC-------------EEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccc
Confidence 66666666 5556666666677778888888888888888887 567888888888888888888888
Q ss_pred CCCchhhhhhcccceEeccCCcccccCCCC-CCCCCCCcccccchhhhhh
Q 045539 510 GAIPASLQKLLYLKHLNLSFNKLEGEIPRG-GPFANLTAKSFMGNELLKM 558 (897)
Q Consensus 510 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~ 558 (897)
+..|..+..+++|+.|+|++|++++.+|.. ..++++..+.+.+|+..|.
T Consensus 484 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 484 QLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 777888888888888888888888776652 4566777778888887765
No 24
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-48 Score=411.63 Aligned_cols=244 Identities=23% Similarity=0.347 Sum_probs=194.9
Q ss_pred CcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecC----CCceEEEE
Q 045539 620 SENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSN----DDFKALIM 692 (897)
Q Consensus 620 ~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 692 (897)
+..+.||+|+||+||+|.+. +++.||+|++.... ....+.|.+|++++++++|||||+++++|.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999999876 58999999987543 3456789999999999999999999999864 35689999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEeCCCCCCCeeeC-CCCcEEEeeccCccccCC
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP--IIHCDLKPSNVLLD-EDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~--ivH~Dlkp~NIll~-~~~~~kL~DFg~a~~~~~ 769 (897)
|||+||+|.+++.... .+++..+..++.||+.||+|| |++| |+||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~yl---H~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999997654 589999999999999999999 6666 99999999999998 478999999999986543
Q ss_pred CCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhh
Q 045539 770 EDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNL 849 (897)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 849 (897)
. .....+||+.|||||++.+ .++.++|||||||++|||+||+.||....... .+.+.+......
T Consensus 185 ~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-~~~~~i~~~~~~---------- 248 (290)
T 3fpq_A 185 S----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYRRVTSGVKP---------- 248 (290)
T ss_dssp T----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHHHHHTTTCCC----------
T ss_pred C----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-HHHHHHHcCCCC----------
Confidence 2 2235679999999998764 69999999999999999999999996521110 111111110000
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
...+ .....++.+++.+||+.|| ++|||++|+++
T Consensus 249 -~~~~------~~~~~~~~~li~~~L~~dP-~~R~s~~e~l~ 282 (290)
T 3fpq_A 249 -ASFD------KVAIPEVKEIIEGCIRQNK-DERYSIKDLLN 282 (290)
T ss_dssp -GGGG------GCCCHHHHHHHHHHSCSSG-GGSCCHHHHHT
T ss_pred -CCCC------ccCCHHHHHHHHHHccCCh-hHCcCHHHHhc
Confidence 0000 1122347889999999999 99999999987
No 25
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-48 Score=410.37 Aligned_cols=246 Identities=22% Similarity=0.338 Sum_probs=189.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||+||+|+.. +|+.||+|++++.. ....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 368999999999999999999875 69999999997543 23456789999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+ +|+|.+++...+ .+++.++..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+......
T Consensus 92 mEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYC---HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 9999 689999987765 599999999999999999999 88999999999999999999999999999998764332
Q ss_pred ceeeeeccccCcccCCcCccCCCCC-CccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRV-CTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
.....+||+.|||||++.+..+ +.++||||+||++|||+||+.||..... . ++......
T Consensus 167 ---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-----~------------~~~~~i~~ 226 (275)
T 3hyh_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----P------------VLFKNISN 226 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----H------------HHHHHHHH
T ss_pred ---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-----H------------HHHHHHHc
Confidence 2334679999999999988776 5899999999999999999999975211 1 11111111
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..+. .+ +.+..++.+++.+|++.|| ++|||++|+++
T Consensus 227 ~~~~-~p---~~~s~~~~~li~~~L~~dP-~~R~s~~eil~ 262 (275)
T 3hyh_A 227 GVYT-LP---KFLSPGAAGLIKRMLIVNP-LNRISIHEIMQ 262 (275)
T ss_dssp TCCC-CC---TTSCHHHHHHHHHHSCSSG-GGSCCHHHHHH
T ss_pred CCCC-CC---CCCCHHHHHHHHHHccCCh-hHCcCHHHHHc
Confidence 1000 00 1123457889999999999 99999999986
No 26
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.1e-49 Score=469.20 Aligned_cols=421 Identities=19% Similarity=0.262 Sum_probs=355.6
Q ss_pred CCCceecccCccccCcCCccccCCCCCcEEeccCccc------cC---------------------------Cccccccc
Q 045539 100 SSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQL------FG---------------------------SLSFFIFN 146 (897)
Q Consensus 100 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l------~~---------------------------~~~~~~~~ 146 (897)
.+++.|+|++|+++|.+|.+|++|++|++|+|++|.+ .+ .++..+..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~ 160 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD 160 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHH
Confidence 4789999999999999999999999999999999976 22 11111111
Q ss_pred -cccccEEEee--------------------ecCCCCCCCccccCccccccccccccccccc-----------------c
Q 045539 147 -VSSVTTIDLS--------------------INGLSGEMPREIGNLPYLARLAFATNNLVGV-----------------A 188 (897)
Q Consensus 147 -l~~L~~LdLs--------------------~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-----------------~ 188 (897)
+..+..+++. +|+++| +|..|+++++|++|+|++|++++. +
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~i 239 (636)
T 4eco_A 161 LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYK 239 (636)
T ss_dssp HHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccC
Confidence 1111112222 678888 999999999999999999999995 7
Q ss_pred ccccc--ccccccccccccccccccCCccccccccccceeeccccc-ccc-cccccccCC------CcccEEEccccccc
Q 045539 189 PVTIF--NMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINS-FYG-TVPSSITNA------SKLSDLELGVNLFS 258 (897)
Q Consensus 189 ~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~L~L~~N~l~ 258 (897)
|..++ ++++|++|+|++|++.|.+|..+. .+++|++|+|++|+ +++ .+|..++++ ++|++|+|++|.++
T Consensus 240 p~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 240 TEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK-ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TSCCCGGGCTTCCEEEEECCTTCSSCCTTTT-TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred chhhhhcccCCCCEEEecCCcCCccChHHHh-cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 99999 999999999999999999997776 89999999999999 998 899999887 99999999999999
Q ss_pred cccCc--cccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCcccc
Q 045539 259 GFIPN--TFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVG 336 (897)
Q Consensus 259 ~~~~~--~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~ 336 (897)
.+|. . ++++++|++|++++|+++|.+| .+..++ +|++|++++|+++ .+|..+.
T Consensus 319 -~ip~~~~---------------------l~~l~~L~~L~L~~N~l~g~ip-~~~~l~-~L~~L~L~~N~l~-~lp~~l~ 373 (636)
T 4eco_A 319 -TFPVETS---------------------LQKMKKLGMLECLYNQLEGKLP-AFGSEI-KLASLNLAYNQIT-EIPANFC 373 (636)
T ss_dssp -SCCCHHH---------------------HTTCTTCCEEECCSCCCEEECC-CCEEEE-EESEEECCSSEEE-ECCTTSE
T ss_pred -ccCchhh---------------------hccCCCCCEEeCcCCcCccchh-hhCCCC-CCCEEECCCCccc-cccHhhh
Confidence 5554 3 4678999999999999998899 888887 8999999999999 8888899
Q ss_pred CccC-CcEEEccCCCCCCCccccccCcc--chhhhcccCcccccccchhhh-------cccccccccccccccccCCCc-
Q 045539 337 NLGN-LLVLELGGNNLTEPIPITFSQLQ--TLQALGLTRNKLAGPITDELC-------HLARLHSLVLQGNKFSGSIPS- 405 (897)
Q Consensus 337 ~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~p~- 405 (897)
.+++ |++|++++|+++ .+|..+..++ +|+.|++++|++++.+|..+. .+++|++|+|++|+++ .+|.
T Consensus 374 ~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~ 451 (636)
T 4eco_A 374 GFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKE 451 (636)
T ss_dssp EECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTH
T ss_pred hhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHH
Confidence 9999 999999999999 5788887765 899999999999999999888 8889999999999999 4555
Q ss_pred ccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCccccc--CCcccccccccCce
Q 045539 406 CLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIG--GLKNLQQMFLEYNR 483 (897)
Q Consensus 406 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~--~l~~L~~L~ls~N~ 483 (897)
.+..+++|+.|+|++|+++ .+|..+..... -....++.|+.|+|++|+++ .+|..+. .+++|+.|+|++|+
T Consensus 452 ~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~-----~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~ 524 (636)
T 4eco_A 452 LFSTGSPLSSINLMGNMLT-EIPKNSLKDEN-----ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNS 524 (636)
T ss_dssp HHHTTCCCSEEECCSSCCS-BCCSSSSEETT-----EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSC
T ss_pred HHccCCCCCEEECCCCCCC-CcCHHHhcccc-----ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCC
Confidence 4567999999999999999 56654433210 00001123336667777777 6788887 99999999999999
Q ss_pred ecccCCCCCCCcCCCcEEec------cCCccCCCCchhhhhhcccceEeccCCcccccCCCCCCCCCCCcccccchhhhh
Q 045539 484 LEGSIPESFGDLSSLEVLDL------SKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIPRGGPFANLTAKSFMGNELLK 557 (897)
Q Consensus 484 l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~c 557 (897)
+++ +|..+.++++|+.|+| ++|++.+.+|.++..+++|+.|+|++|++ +.+|.. ..+++..+.+.+|+..|
T Consensus 525 l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 525 FSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNIS 601 (636)
T ss_dssp CSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCE
T ss_pred CCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcc
Confidence 997 9999999999999999 56889999999999999999999999999 788875 33788899999999887
Q ss_pred hh
Q 045539 558 ML 559 (897)
Q Consensus 558 ~~ 559 (897)
..
T Consensus 602 ~~ 603 (636)
T 4eco_A 602 ID 603 (636)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 27
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.8e-49 Score=421.37 Aligned_cols=272 Identities=23% Similarity=0.282 Sum_probs=202.4
Q ss_pred cCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCC----ceEEEE
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDD----FKALIM 692 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 692 (897)
++|.+.++||+|+||+||+|++. |+.||||+++..... ....+.|+..+.+++|||||+++++|.+++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 46888899999999999999985 899999999765332 233445666777889999999999997653 579999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFG-----HSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~-----h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
||+++|+|.++++... +++.++.+++.|+++||+|||.. |+.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999999998764 89999999999999999999642 3559999999999999999999999999999876
Q ss_pred CCCCcee--eeeccccCcccCCcCccCCC------CCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCc
Q 045539 768 SGEDQLS--IQIQTLATIGYMAPEYGTKG------RVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPV 839 (897)
Q Consensus 768 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 839 (897)
....... ......||+.|||||++.+. .++.++|||||||++|||+||..||.........+..........
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 5443321 22345799999999987654 467899999999999999999988765332222211111110000
Q ss_pred -hHH-HHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 840 -SVM-EVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 840 -~~~-~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
... .+....+....+.... ..++...+.+++.+||+.|| ++||||+||+++|+
T Consensus 239 ~~~~~~~~~~~~rp~~p~~~~-~~~~~~~l~~li~~cl~~dP-~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANG-AARLTALRIKKTLS 293 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGG-SSHHHHHHHHHHHTTCCSSG-GGSCCHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCCCcccc-chHHHHHHHHHHHHHcccCH-hHCcCHHHHHHHHH
Confidence 111 1222222222221111 12445678899999999999 99999999999885
No 28
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.6e-49 Score=430.49 Aligned_cols=265 Identities=22% Similarity=0.332 Sum_probs=215.0
Q ss_pred CCHHHHHHHhcCCCcCCeeecccceEEEEEEecC------CceEEEEEechhh-HHHHHHHHHHHHHHHhcCC-CccceE
Q 045539 607 FSYHELLRATDRFSENNLIGIGSFGSIYVARLQD------GMEVAVKVFHQQY-ERALKSFEDECEVMKRIRH-RNLVKI 678 (897)
Q Consensus 607 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~l 678 (897)
+..++++...++|++.+.||+|+||+||+|++.. ++.||||+++... ....+.+.+|++++++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4455666667899999999999999999998642 3679999997543 3445789999999999975 899999
Q ss_pred eeeecC-CCceEEEEEeccCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCC
Q 045539 679 ISSCSN-DDFKALIMKYMPNGSLENCLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCD 742 (897)
Q Consensus 679 ~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~D 742 (897)
+|+|.+ ++..|+|||||++|+|.++++... ..+++.++..++.|||+||+|| |+++|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yL---H~~~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHH---HHTTCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhH---hhCCeecCc
Confidence 999865 457899999999999999997532 3489999999999999999999 889999999
Q ss_pred CCCCCeeeCCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcc
Q 045539 743 LKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDE 821 (897)
Q Consensus 743 lkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~ 821 (897)
|||+|||+++++.+||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999987765555445556679999999999999999999999999999999998 8999976
Q ss_pred cccCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 822 IFIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
....+ . +...+........+ +.+..++.+++.+||+.|| ++|||++||++.|+
T Consensus 291 ~~~~~-~------------~~~~i~~g~~~~~p------~~~~~~~~~li~~c~~~dP-~~RPt~~eil~~L~ 343 (353)
T 4ase_A 291 VKIDE-E------------FCRRLKEGTRMRAP------DYTTPEMYQTMLDCWHGEP-SQRPTFSELVEHLG 343 (353)
T ss_dssp CCCSH-H------------HHHHHHHTCCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred CCHHH-H------------HHHHHHcCCCCCCC------ccCCHHHHHHHHHHcCcCh-hHCcCHHHHHHHHH
Confidence 32111 1 11122111111111 1233457899999999999 99999999999875
No 29
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.7e-48 Score=457.63 Aligned_cols=464 Identities=22% Similarity=0.252 Sum_probs=362.7
Q ss_pred EEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCC
Q 045539 81 LNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGL 160 (897)
Q Consensus 81 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l 160 (897)
++-++.+++ .+|..+. +++++|||++|++++..+..|.++++|++|+|++|++.+..+..|.++++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 344455565 5776653 5899999999999988888999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCcccccccccccccccccccccccccccccccccccccccc-cCCccccccccccceeecccccccccccc
Q 045539 161 SGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSG-SLPSRIDLSLPNVETLNLGINSFYGTVPS 239 (897)
Q Consensus 161 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~~l~~L~~L~L~~N~l~~~~p~ 239 (897)
++..|..|+++++|++|++++|+++++.+..++++++|++|++++|++++ .+|..+. .+++|++|++++|.+++..+.
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~-~l~~L~~L~l~~n~l~~~~~~ 167 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS-NLTNLEHLDLSSNKIQSIYCT 167 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGG-GCTTCCEEECTTSCCCEECGG
T ss_pred CccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhc-ccCCCCEEeCcCCccceecHH
Confidence 98778999999999999999999999988789999999999999999986 4677655 799999999999999998899
Q ss_pred cccCCCcc----cEEEccccccccccCccccccc--cccccCCCCcc-cccccccccCCCcEEEecCCCCC------CCC
Q 045539 240 SITNASKL----SDLELGVNLFSGFIPNTFVNMA--DNYLTSSTPEL-SFLSSLTNCKKLKVLILTGNPLD------GIL 306 (897)
Q Consensus 240 ~l~~l~~L----~~L~L~~N~l~~~~~~~f~~l~--~~~l~~~~~~~-~~l~~l~~l~~L~~L~Ls~N~l~------~~~ 306 (897)
.++.+++| +.|++++|.+++..+..|.... ...+..+.... .....+.++++++.+.+.-+.+. ...
T Consensus 168 ~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 247 (570)
T 2z63_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 247 (570)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECC
T ss_pred HccchhccchhhhhcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcc
Confidence 99999999 8999999999999887764321 11111110000 00011222233332222211111 111
Q ss_pred CCcccCch-HHHHHHHhccC-CCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhh
Q 045539 307 PKSKGNLS-LSLEIILMDNC-SISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELC 384 (897)
Q Consensus 307 p~~~~~l~-~~L~~L~l~~n-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 384 (897)
...+..+. .+++.+.+..+ .+.+..|..+..+++|++|++++|.+++ +|..+..+ +|++|++++|++. .+|. .
T Consensus 248 ~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~-~l~~--~ 322 (570)
T 2z63_A 248 KSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFG-QFPT--L 322 (570)
T ss_dssp TTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCS-SCCB--C
T ss_pred hhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeeccCccc-ccCc--c
Confidence 11111111 01334444555 5667778888888888888888888885 67777777 8888888888887 4554 4
Q ss_pred cccccccccccccccccCCCcccccccccceeccccccccCCc--cccccccccceEEeecCCcc----------cccce
Q 045539 385 HLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSAL--PSTIWNLKDILFIDVSSNSL----------NVLIG 452 (897)
Q Consensus 385 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~ls~N~l----------~~l~~ 452 (897)
.+++|++|++++|.+.+..+. ..+++|+.|++++|++++.. |..+..+++|++|++++|.+ +.|+.
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~ 400 (570)
T 2z63_A 323 KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEH 400 (570)
T ss_dssp BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCE
T ss_pred cccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCE
Confidence 677888888888888766555 67888888888888887654 67788888888888888864 35778
Q ss_pred eecccCcCCCCCc-ccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccC-CCCchhhhhhcccceEeccCC
Q 045539 453 LNFSRNNLSGDIP-ITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKIS-GAIPASLQKLLYLKHLNLSFN 530 (897)
Q Consensus 453 l~ls~n~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls~N 530 (897)
|++++|.+++..| ..+..+++|++|++++|++++..|..|.++++|++|+|++|+++ +.+|..+..+++|+.|+|++|
T Consensus 401 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n 480 (570)
T 2z63_A 401 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480 (570)
T ss_dssp EECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCC
Confidence 9999999988776 57899999999999999999999999999999999999999998 679999999999999999999
Q ss_pred cccccCCCC-CCCCCCCcccccchhh
Q 045539 531 KLEGEIPRG-GPFANLTAKSFMGNEL 555 (897)
Q Consensus 531 ~l~~~~p~~-~~~~~~~~~~~~~N~~ 555 (897)
++++.+|.. ..++++..+.+.+|..
T Consensus 481 ~l~~~~~~~~~~l~~L~~L~l~~n~l 506 (570)
T 2z63_A 481 QLEQLSPTAFNSLSSLQVLNMASNQL 506 (570)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ccccCChhhhhcccCCCEEeCCCCcC
Confidence 999987753 4577888888888853
No 30
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3e-49 Score=420.35 Aligned_cols=242 Identities=24% Similarity=0.313 Sum_probs=192.2
Q ss_pred cCCCcCCeeecccceEEEEEEec----CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQ----DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
++|++.+.||+|+||+||+|+.. +++.||+|++++.. .....++.+|++++++++|||||++++++++++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999753 47889999987542 1223467889999999999999999999999999999
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
||||++||+|.+++...+ .+++.++..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHL---HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999997654 599999999999999999999 8999999999999999999999999999999865432
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
. ......+||+.|||||++.+..++.++||||+||++|||+||+.||..... .+++.....
T Consensus 180 ~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----------------~~~~~~i~~ 240 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----------------KETMTMILK 240 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------------HHHHHHHHH
T ss_pred C--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----------------HHHHHHHHc
Confidence 2 223456799999999999999999999999999999999999999975211 111111111
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCH
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADM 886 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~ 886 (897)
..+. .+ +.+..++.+++.+||+.|| ++|||+
T Consensus 241 ~~~~-~p---~~~s~~~~~li~~~L~~dP-~~R~ta 271 (304)
T 3ubd_A 241 AKLG-MP---QFLSPEAQSLLRMLFKRNP-ANRLGA 271 (304)
T ss_dssp CCCC-CC---TTSCHHHHHHHHHHTCSSG-GGSTTC
T ss_pred CCCC-CC---CcCCHHHHHHHHHHcccCH-HHCCCC
Confidence 1110 00 1123457899999999999 999985
No 31
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.5e-47 Score=405.82 Aligned_cols=250 Identities=20% Similarity=0.301 Sum_probs=189.4
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCC-------
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDD------- 686 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 686 (897)
.++|++.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 356999999999999999999875 69999999987543 344578899999999999999999999986543
Q ss_pred -----ceEEEEEeccCCChhHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEe
Q 045539 687 -----FKALIMKYMPNGSLENCLYSGT--CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHIS 759 (897)
Q Consensus 687 -----~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~ 759 (897)
..|+||||+++|+|.+++.... ...++..+..++.||++||+|| |++||+||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~yl---H~~~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHH---HHCcCccccCcHHHeEECCCCcEEEc
Confidence 3689999999999999998764 3356677889999999999999 88999999999999999999999999
Q ss_pred eccCccccCCCCce----------eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccch
Q 045539 760 DFGIAKLLSGEDQL----------SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSL 829 (897)
Q Consensus 760 DFg~a~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~ 829 (897)
|||+|+........ ...+..+||+.|||||++.+..++.++|||||||++|||++ ||......
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~---- 233 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER---- 233 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH----
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH----
Confidence 99999876543221 11234579999999999999999999999999999999996 77542110
Q ss_pred hHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 830 NRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 830 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
...+........+ +...+......+++.+||+.|| ++|||++|+++
T Consensus 234 ------------~~~~~~~~~~~~p---~~~~~~~~~~~~li~~~L~~dP-~~Rps~~eil~ 279 (299)
T 4g31_A 234 ------------VRTLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSP-MERPEAINIIE 279 (299)
T ss_dssp ------------HHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHTCSSG-GGSCCHHHHHT
T ss_pred ------------HHHHHHHhcCCCC---CCCcccCHHHHHHHHHHcCCCh-hHCcCHHHHhc
Confidence 0111111111111 1122233446789999999999 99999999987
No 32
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.6e-47 Score=461.26 Aligned_cols=418 Identities=20% Similarity=0.251 Sum_probs=349.8
Q ss_pred CCCceecccCccccCcCCccccCCCCCcEEec-cCccccCCcccccc---------------------------------
Q 045539 100 SSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYF-SDNQLFGSLSFFIF--------------------------------- 145 (897)
Q Consensus 100 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~~~~~~--------------------------------- 145 (897)
..++.|+|++|+++|.+|++|++|++|++|+| ++|.+.|..+....
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999999999999999999999 99988776432211
Q ss_pred ------------------ccccccEEEee--ecCCCCCCCccccCcccccccccccccccc-----------------cc
Q 045539 146 ------------------NVSSVTTIDLS--INGLSGEMPREIGNLPYLARLAFATNNLVG-----------------VA 188 (897)
Q Consensus 146 ------------------~l~~L~~LdLs--~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-----------------~~ 188 (897)
....++.+.++ .|++++ +|..|++|++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 11122333333 488887 99999999999999999999999 37
Q ss_pred ccccc--ccccccccccccccccccCCccccccccccceeeccccc-ccc-cccccccCCC-------cccEEEcccccc
Q 045539 189 PVTIF--NMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINS-FYG-TVPSSITNAS-------KLSDLELGVNLF 257 (897)
Q Consensus 189 ~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l 257 (897)
|..++ ++++|++|+|++|++.+.+|..+. .+++|++|+|++|+ +++ .+|..+++++ +|+.|+|++|.+
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~-~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLY-DLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGG-GCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHh-CCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 88877 999999999999999999997665 89999999999998 998 8998777776 999999999999
Q ss_pred ccccCc--cccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccc
Q 045539 258 SGFIPN--TFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVV 335 (897)
Q Consensus 258 ~~~~~~--~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~ 335 (897)
+ .+|. . +.++++|++|+|++|+++ .+| .+..++ +|+.|++++|+++ .+|..+
T Consensus 561 ~-~ip~~~~---------------------l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~-~L~~L~Ls~N~l~-~lp~~l 614 (876)
T 4ecn_A 561 E-EFPASAS---------------------LQKMVKLGLLDCVHNKVR-HLE-AFGTNV-KLTDLKLDYNQIE-EIPEDF 614 (876)
T ss_dssp C-BCCCHHH---------------------HTTCTTCCEEECTTSCCC-BCC-CCCTTS-EESEEECCSSCCS-CCCTTS
T ss_pred C-ccCChhh---------------------hhcCCCCCEEECCCCCcc-cch-hhcCCC-cceEEECcCCccc-cchHHH
Confidence 9 5554 3 467899999999999999 777 888887 8999999999999 889899
Q ss_pred cCccC-CcEEEccCCCCCCCccccccCccc--hhhhcccCcccccccchhh---h--cccccccccccccccccCCCccc
Q 045539 336 GNLGN-LLVLELGGNNLTEPIPITFSQLQT--LQALGLTRNKLAGPITDEL---C--HLARLHSLVLQGNKFSGSIPSCL 407 (897)
Q Consensus 336 ~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~Ls~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~p~~~ 407 (897)
..+++ |+.|+|++|+++ .+|..+..++. |+.|+|++|++.+.+|... . .+++|+.|+|++|+++ .+|..+
T Consensus 615 ~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~ 692 (876)
T 4ecn_A 615 CAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTEL 692 (876)
T ss_dssp CEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHH
T ss_pred hhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHH
Confidence 99999 999999999999 57888887765 9999999999998776433 2 3458999999999999 666655
Q ss_pred -ccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCccccc--CCcccccccccCcee
Q 045539 408 -GNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIG--GLKNLQQMFLEYNRL 484 (897)
Q Consensus 408 -~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~--~l~~L~~L~ls~N~l 484 (897)
..+++|+.|+|++|+++ .+|..+.....- ....++.|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|
T Consensus 693 ~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~-----~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L 765 (876)
T 4ecn_A 693 FATGSPISTIILSNNLMT-SIPENSLKPKDG-----NYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCF 765 (876)
T ss_dssp HHTTCCCSEEECCSCCCS-CCCTTSSSCTTS-----CCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCC
T ss_pred HccCCCCCEEECCCCcCC-ccChHHhccccc-----cccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCC
Confidence 58999999999999999 566655432200 0001123336667777777 6788887 999999999999999
Q ss_pred cccCCCCCCCcCCCcEEeccC------CccCCCCchhhhhhcccceEeccCCcccccCCCCCCCCCCCcccccchhhhh
Q 045539 485 EGSIPESFGDLSSLEVLDLSK------NKISGAIPASLQKLLYLKHLNLSFNKLEGEIPRGGPFANLTAKSFMGNELLK 557 (897)
Q Consensus 485 ~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~c 557 (897)
++ +|..+..+++|+.|+|++ |++.+.+|..+.++++|+.|+|++|++ +.+|.. ..+++..+.+.+|+...
T Consensus 766 ~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 766 SS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNPNIS 841 (876)
T ss_dssp SS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCTTCE
T ss_pred Cc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCCCCc
Confidence 97 899999999999999976 889999999999999999999999999 788875 34688888999998643
No 33
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.1e-47 Score=452.05 Aligned_cols=444 Identities=19% Similarity=0.207 Sum_probs=354.6
Q ss_pred EEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCC
Q 045539 81 LNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGL 160 (897)
Q Consensus 81 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l 160 (897)
.|.++++++ .+|+.+. ++|++|||++|++++..|..|+++++|++|+|++|++.+..|..|.++++|++|||++|++
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 688899988 7888765 8999999999999988899999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCccccccccccccccccc-ccccccccccccccccccccccccCCccccccccccceeecccccccccccc
Q 045539 161 SGEMPREIGNLPYLARLAFATNNLVGV-APVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPS 239 (897)
Q Consensus 161 ~~~~p~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~ 239 (897)
++..|..|+++++|++|+|++|+++++ .|..++++++|++|++++|++.+.+|...+..+++|++|++++|.+++..|.
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 987777899999999999999999975 4678999999999999999976788877777899999999999999999999
Q ss_pred cccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCC--CCcccCchHHH
Q 045539 240 SITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGIL--PKSKGNLSLSL 317 (897)
Q Consensus 240 ~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~~L 317 (897)
.+..+++|++|+++.|.+...... + +..+++|++|++++|++++.. |..+.....+|
T Consensus 167 ~l~~l~~L~~L~l~~n~~~~~~~~-~--------------------~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L 225 (549)
T 2z81_A 167 SLKSIRDIHHLTLHLSESAFLLEI-F--------------------ADILSSVRYLELRDTNLARFQFSPLPVDEVSSPM 225 (549)
T ss_dssp TTTTCSEEEEEEEECSBSTTHHHH-H--------------------HHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCC
T ss_pred hhhccccCceEecccCcccccchh-h--------------------HhhcccccEEEccCCccccccccccchhhhhhcc
Confidence 999999999999999987643322 1 234567777777777776642 22222222245
Q ss_pred HHHHhccCCCCCCcC----ccccCccCCcEEEccCCCCCCC-----------------------------------cccc
Q 045539 318 EIILMDNCSISGNIP----QVVGNLGNLLVLELGGNNLTEP-----------------------------------IPIT 358 (897)
Q Consensus 318 ~~L~l~~n~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~-----------------------------------~~~~ 358 (897)
+.|++++|.+++..+ ..+..+++|+.|++++|.+.+. .+..
T Consensus 226 ~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~ 305 (549)
T 2z81_A 226 KKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV 305 (549)
T ss_dssp CEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHH
T ss_pred cceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhh
Confidence 555555555544322 2223344444444444443331 0111
Q ss_pred ccCccchhhhcccCcccccccchhh-hcccccccccccccccccCCC---cccccccccceeccccccccCCcc--cccc
Q 045539 359 FSQLQTLQALGLTRNKLAGPITDEL-CHLARLHSLVLQGNKFSGSIP---SCLGNLTSLRVLYLGLNRFTSALP--STIW 432 (897)
Q Consensus 359 ~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~p--~~~~ 432 (897)
+....+|+.|++++|++. .+|..+ ..+++|++|+|++|++++.+| ..++.+++|+.|++++|++++..+ ..+.
T Consensus 306 ~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 384 (549)
T 2z81_A 306 YSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILL 384 (549)
T ss_dssp HHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGG
T ss_pred hhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhh
Confidence 223457889999999987 566655 579999999999999998764 457889999999999999987543 5688
Q ss_pred ccccceEEeecCCccc----------ccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEe
Q 045539 433 NLKDILFIDVSSNSLN----------VLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLD 502 (897)
Q Consensus 433 ~l~~L~~L~ls~N~l~----------~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 502 (897)
.+++|++|++++|+++ .|+.|++++|++++ +|..+. ++|++|++++|+|++.+ ..+++|++|+
T Consensus 385 ~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~ 457 (549)
T 2z81_A 385 TLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELY 457 (549)
T ss_dssp GCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEE
T ss_pred cCCCCCEEECCCCCCccCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChhcEEE
Confidence 9999999999999764 47789999999874 444432 68999999999999743 5789999999
Q ss_pred ccCCccCCCCchhhhhhcccceEeccCCcccccCCC-CCCCCCCCcccccchhhhhh
Q 045539 503 LSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIPR-GGPFANLTAKSFMGNELLKM 558 (897)
Q Consensus 503 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~N~~~c~ 558 (897)
|++|+|+ .+|. ...+++|+.|+|++|++++.+|. .+.+.++..+.+.+|++.|.
T Consensus 458 Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 458 ISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 9999999 7887 57899999999999999998886 35678888899999998876
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.5e-48 Score=449.43 Aligned_cols=448 Identities=20% Similarity=0.198 Sum_probs=304.6
Q ss_pred EEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecC
Q 045539 80 GLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSING 159 (897)
Q Consensus 80 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~ 159 (897)
.+|+++++++ .+|..+. ++|++|||++|.+++..|..|.++++|++|+|++|++.+..|..|.++++|++|||++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 5788888888 5777666 788888888888887777788888888888888888888888888888888888888888
Q ss_pred CCCCCCccccCccccccccccccccccc-ccccccccccccccccccccccccCCcccccccccc--ceeecccccc--c
Q 045539 160 LSGEMPREIGNLPYLARLAFATNNLVGV-APVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNV--ETLNLGINSF--Y 234 (897)
Q Consensus 160 l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L--~~L~L~~N~l--~ 234 (897)
++ .+|.. .+++|++|+|++|+++++ .|..|+++++|++|+|++|++++. .+..+++| ++|+|++|.+ .
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS----SVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG----GGGGGTTSCEEEEEEEECTTTTS
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchh----hccccccceeeEEEeeccccccc
Confidence 88 57766 788888888888888874 577888888888888888888742 23356666 8888888888 7
Q ss_pred ccccccccCCC-cccEEEccccccccccCcc-cccc---ccccccCCC------CcccccccccccCCCcEEEecCCCCC
Q 045539 235 GTVPSSITNAS-KLSDLELGVNLFSGFIPNT-FVNM---ADNYLTSST------PELSFLSSLTNCKKLKVLILTGNPLD 303 (897)
Q Consensus 235 ~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~-f~~l---~~~~l~~~~------~~~~~l~~l~~l~~L~~L~Ls~N~l~ 303 (897)
+..|..+..+. +...+++++|.+.+.++.. +..+ ....++.+. .-...++.+..+++|+.|++++|.+.
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccC
Confidence 77777777655 3445566666665544432 1111 111111100 00011123455666666666666655
Q ss_pred CCCCCcccCc--hHHHHHHHhccCCCCCCcCccc-----cCccCCcEEEccCCCCCCCcc-ccccCc---cchhhhcccC
Q 045539 304 GILPKSKGNL--SLSLEIILMDNCSISGNIPQVV-----GNLGNLLVLELGGNNLTEPIP-ITFSQL---QTLQALGLTR 372 (897)
Q Consensus 304 ~~~p~~~~~l--~~~L~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~~-~~~~~l---~~L~~L~Ls~ 372 (897)
+..+..+... ..+|++|++++|+++|.+|..+ +.+++|+.+++++|.+ . +| ..+..+ .+|+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~-~p~~~~~~~~~~~~L~~L~l~~ 311 (520)
T 2z7x_B 234 WNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-G-FPQSYIYEIFSNMNIKNFTVSG 311 (520)
T ss_dssp HHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-C-SCTHHHHHHHHTCCCSEEEEES
T ss_pred HHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-e-cchhhhhcccccCceeEEEcCC
Confidence 3211111000 0135555666666665666555 5666666666666666 2 33 333333 4466666666
Q ss_pred cccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccC--CccccccccccceEEeecCCccccc
Q 045539 373 NKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTS--ALPSTIWNLKDILFIDVSSNSLNVL 450 (897)
Q Consensus 373 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~l 450 (897)
|++.... .+..+++|++|++++|++++.+|..++++++|+.|++++|++++ .+|..+..+++|+
T Consensus 312 n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~------------ 377 (520)
T 2z7x_B 312 TRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQ------------ 377 (520)
T ss_dssp SCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCC------------
T ss_pred Ccccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCC------------
Confidence 6654322 11455666666666666665566666666666666666666654 3445555555555
Q ss_pred ceeecccCcCCCCCccc-ccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccC
Q 045539 451 IGLNFSRNNLSGDIPIT-IGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSF 529 (897)
Q Consensus 451 ~~l~ls~n~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 529 (897)
.|++++|++++.+|.. +..+++|++|++++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++
T Consensus 378 -~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~ 453 (520)
T 2z7x_B 378 -QLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVAS 453 (520)
T ss_dssp -EEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCS
T ss_pred -EEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCC
Confidence 6677777777756654 88899999999999999988888775 79999999999999 8999888999999999999
Q ss_pred CcccccCCC--CCCCCCCCcccccchhhhhh
Q 045539 530 NKLEGEIPR--GGPFANLTAKSFMGNELLKM 558 (897)
Q Consensus 530 N~l~~~~p~--~~~~~~~~~~~~~~N~~~c~ 558 (897)
|++++ +|. ...+.++..+.+.+|+..|.
T Consensus 454 N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 454 NQLKS-VPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp SCCCC-CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CcCCc-cCHHHhccCCcccEEECcCCCCccc
Confidence 99995 554 34577888889999998875
No 35
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=7e-47 Score=442.08 Aligned_cols=415 Identities=22% Similarity=0.282 Sum_probs=342.2
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEe
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDL 155 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 155 (897)
.+++.|+|++|++++..|.+++++++|++|+|++|++++..|..|+++++|++|+|++|++.. +|.. .+++|++|||
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEec
Confidence 578999999999998888899999999999999999998889999999999999999999985 5554 8999999999
Q ss_pred eecCCCC-CCCccccCcccccccccccccccccccccccccccc--cccccccccc--cccCCccccc------------
Q 045539 156 SINGLSG-EMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSAL--KEIYLLNNSL--SGSLPSRIDL------------ 218 (897)
Q Consensus 156 s~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~------------ 218 (897)
++|++++ .+|..|+++++|++|++++|++++. .+.++++| ++|++++|++ ++..|..+..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS---SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG---GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchh---hccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 9999997 5789999999999999999999873 57778888 9999999999 6666655432
Q ss_pred -------------cccccceeeccccc-------ccccccccccCCCcccEEEccccccccccCccccccccccccCCCC
Q 045539 219 -------------SLPNVETLNLGINS-------FYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTP 278 (897)
Q Consensus 219 -------------~l~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~ 278 (897)
.+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+++..+..+.
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~------------ 241 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRIL------------ 241 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHH------------
T ss_pred Ccchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHH------------
Confidence 35566666666665 555544 566666666666666666543322110
Q ss_pred cccccccccccCCCcEEEecCCCCCCCCCCcc-----cCchHHHHHHHhccCCCCCCcC-ccccCc---cCCcEEEccCC
Q 045539 279 ELSFLSSLTNCKKLKVLILTGNPLDGILPKSK-----GNLSLSLEIILMDNCSISGNIP-QVVGNL---GNLLVLELGGN 349 (897)
Q Consensus 279 ~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~~L~~L~l~~n~l~~~~p-~~~~~l---~~L~~L~L~~N 349 (897)
....+++|++|++++|++.+.+|..+ ..+. +|+.+++++|.+ .+| ..+..+ .+|+.|++++|
T Consensus 242 ------~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~-~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n 312 (520)
T 2z7x_B 242 ------QLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLK-ALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGT 312 (520)
T ss_dssp ------HHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCC-EEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESS
T ss_pred ------HHhhhCcccEEEeecccccCccccchhhcccccCc-eeEeccccccce--ecchhhhhcccccCceeEEEcCCC
Confidence 01124689999999999999899888 7776 889999999999 455 555555 67999999999
Q ss_pred CCCCCccccccCccchhhhcccCcccccccchhhhccccccccccccccccc--CCCcccccccccceeccccccccCCc
Q 045539 350 NLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSG--SIPSCLGNLTSLRVLYLGLNRFTSAL 427 (897)
Q Consensus 350 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~ 427 (897)
.+.+.. .+..+++|++|++++|++++.+|..+..+++|++|+|++|++++ .+|..++++++|+.|++++|++++.+
T Consensus 313 ~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l 390 (520)
T 2z7x_B 313 RMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDE 390 (520)
T ss_dssp CCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCG
T ss_pred cccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccc
Confidence 987643 23688999999999999999899999999999999999999996 56678999999999999999999856
Q ss_pred cc-cccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCC
Q 045539 428 PS-TIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKN 506 (897)
Q Consensus 428 p~-~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 506 (897)
|. .+..+++|+ .|++++|++++.+|..+. ++|+.|++++|+++ .+|..+..+++|++|+|++|
T Consensus 391 ~~~~~~~l~~L~-------------~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N 454 (520)
T 2z7x_B 391 KKGDCSWTKSLL-------------SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASN 454 (520)
T ss_dssp GGCSCCCCTTCC-------------EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSS
T ss_pred ccchhccCccCC-------------EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCC
Confidence 65 477777777 555666666677777665 79999999999999 78988889999999999999
Q ss_pred ccCCCCchh-hhhhcccceEeccCCcccccCC
Q 045539 507 KISGAIPAS-LQKLLYLKHLNLSFNKLEGEIP 537 (897)
Q Consensus 507 ~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~p 537 (897)
+|+ .+|.. +..+++|+.|+|++|++++..+
T Consensus 455 ~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 455 QLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 999 56665 8999999999999999987544
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.4e-44 Score=431.59 Aligned_cols=471 Identities=20% Similarity=0.184 Sum_probs=330.2
Q ss_pred eEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEee
Q 045539 77 RVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLS 156 (897)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 156 (897)
.++.|||++|++++..+.+|+++++|++|||++|+|++..|.+|.+|++|++|+|++|+|++.++..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 57788888888887667788888888888888888887777778888888888888888888777888888888888888
Q ss_pred ecCCCCCCCccccCccccccccccccccccc-ccccccccccccccccccccccccCCcccccccccc----ceeecccc
Q 045539 157 INGLSGEMPREIGNLPYLARLAFATNNLVGV-APVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNV----ETLNLGIN 231 (897)
Q Consensus 157 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L----~~L~L~~N 231 (897)
+|++++..+..|+++++|++|+|++|++++. .|..++++++|++|+|++|++++..|..+ ..+.++ ..++++.|
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l-~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL-RVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG-HHHHTCTTCCCEEECTTC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc-cchhhhhhhhhhhhcccC
Confidence 8888866666788888888888888888764 46677888888888888888875444433 233333 35778888
Q ss_pred cccccccccccCCCcccEEEccccccccccC-ccccccccc--------------cccCC--------------------
Q 045539 232 SFYGTVPSSITNASKLSDLELGVNLFSGFIP-NTFVNMADN--------------YLTSS-------------------- 276 (897)
Q Consensus 232 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~f~~l~~~--------------~l~~~-------------------- 276 (897)
.+....+..+ ....++.+++.+|......+ ..+..+... .+...
T Consensus 212 ~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 8875444443 44456777777775432211 111111000 00000
Q ss_pred --CCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCC
Q 045539 277 --TPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEP 354 (897)
Q Consensus 277 --~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 354 (897)
.........+..+.+++.+++.+|.+..+.+. .... .++.|.+.+|.+.+..+. .+..|+.+++++|.+...
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~--~~~~-~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~ 364 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDF--SYNF-GWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA 364 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECGGG--GSCC-CCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB
T ss_pred hcccccchhhhhhhhccccccccccccccccccc--ccch-hhhhhhcccccccCcCcc---cchhhhhcccccccCCCC
Confidence 00000111234455666666666665543221 1111 456667777776654433 345677777777776542
Q ss_pred ccccccCccchhhhcccCccccc--ccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCcc-ccc
Q 045539 355 IPITFSQLQTLQALGLTRNKLAG--PITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALP-STI 431 (897)
Q Consensus 355 ~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~ 431 (897)
..+..+++|+.|++++|.+.. ..+..+..+.+|++|+++.|.+. ..+..+..+++|+.++++.|......+ ..+
T Consensus 365 --~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~ 441 (635)
T 4g8a_A 365 --FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVF 441 (635)
T ss_dssp --CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTT
T ss_pred --cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhcccccccccccc
Confidence 234466777777777777653 34555666677777777777776 345566677777777777766654433 446
Q ss_pred cccccceEEeecCCccc-----------ccceeecccCcC-CCCCcccccCCcccccccccCceecccCCCCCCCcCCCc
Q 045539 432 WNLKDILFIDVSSNSLN-----------VLIGLNFSRNNL-SGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLE 499 (897)
Q Consensus 432 ~~l~~L~~L~ls~N~l~-----------~l~~l~ls~n~l-~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 499 (897)
..+.+++.++++.|.+. .++.|++++|++ .+.+|..|..+++|++|+|++|+|++..|..|.++++|+
T Consensus 442 ~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~ 521 (635)
T 4g8a_A 442 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 521 (635)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCC
Confidence 66777777777777543 356788888874 445788999999999999999999999999999999999
Q ss_pred EEeccCCccCCCCchhhhhhcccceEeccCCcccccCCCCC-CC-CCCCcccccchhhhhh
Q 045539 500 VLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIPRGG-PF-ANLTAKSFMGNELLKM 558 (897)
Q Consensus 500 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~-~~~~~~~~~~N~~~c~ 558 (897)
+|+|++|+|++..|..+..+++|+.|+|++|++++.+|..- .+ .+++.+.+.|||+.|.
T Consensus 522 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 522 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp EEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred EEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 99999999998889999999999999999999999988642 33 5678889999998874
No 37
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.7e-44 Score=412.89 Aligned_cols=399 Identities=20% Similarity=0.220 Sum_probs=314.2
Q ss_pred CCcceee--eEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCC
Q 045539 62 SVCSWIG--ITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGS 139 (897)
Q Consensus 62 ~~c~w~g--v~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 139 (897)
..|.|.+ |.|+. ++++ .+|. + .++|++|||++|.+++..|..|+++++|++|+|++|.+.+.
T Consensus 6 ~~c~~~~~~~~c~~------------~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~ 69 (455)
T 3v47_A 6 SECSVIGYNAICIN------------RGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLV 69 (455)
T ss_dssp -CCEEETTEEECCS------------SCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCE
T ss_pred ceeEEEccccCcCC------------CCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccce
Confidence 4577766 66653 3344 4565 3 27899999999999988899999999999999999998755
Q ss_pred c-cccccccccccEEEeeecCCCCCCCccccCccccccccccccccccccccc--ccccccccccccccccccccCCccc
Q 045539 140 L-SFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVT--IFNMSALKEIYLLNNSLSGSLPSRI 216 (897)
Q Consensus 140 ~-~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~p~~~ 216 (897)
+ +..|.++++|++|||++|++++..|..|+++++|++|+|++|++++..+.. |.++++|++|+|++|++++..|..+
T Consensus 70 i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 149 (455)
T 3v47_A 70 IRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASF 149 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGG
T ss_pred ECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccc
Confidence 4 677999999999999999999888999999999999999999998855554 8899999999999999987777776
Q ss_pred cccccccceeecccccccccccccccCC--CcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcE
Q 045539 217 DLSLPNVETLNLGINSFYGTVPSSITNA--SKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKV 294 (897)
Q Consensus 217 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~ 294 (897)
+..+++|++|+|++|.+++..+..+..+ .+|+.|++++|.+.+..+..+.. .....+..+++|++
T Consensus 150 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~-------------~~~~~~~~~~~L~~ 216 (455)
T 3v47_A 150 FLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW-------------EKCGNPFKNTSITT 216 (455)
T ss_dssp GGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH-------------HHHCCTTTTCEEEE
T ss_pred cCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccc-------------cccccccccceeee
Confidence 6788899999999999988888888776 68888888888887765543210 11122345677888
Q ss_pred EEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcc
Q 045539 295 LILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNK 374 (897)
Q Consensus 295 L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 374 (897)
|++++|++.+..|..+... ...++|+.|++++|.+.+.. +..+.
T Consensus 217 L~Ls~n~l~~~~~~~~~~~----------------------~~~~~L~~L~l~~~~~~~~~--------------~~~~~ 260 (455)
T 3v47_A 217 LDLSGNGFKESMAKRFFDA----------------------IAGTKIQSLILSNSYNMGSS--------------FGHTN 260 (455)
T ss_dssp EECTTSCCCHHHHHHHHHH----------------------TTTCCEEEEECTTCTTTSCC--------------TTCCS
T ss_pred EecCCCcccccchhhhhcc----------------------ccccceeeEeeccccccccc--------------cchhh
Confidence 8888888776543322211 12367888888888766521 12222
Q ss_pred cccccchhhhcc--cccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccce
Q 045539 375 LAGPITDELCHL--ARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIG 452 (897)
Q Consensus 375 l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~ 452 (897)
+.+..+..+..+ ++|++|++++|++++.+|..++.+++|+.|++++|++++..|..|.++++|+ .
T Consensus 261 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~-------------~ 327 (455)
T 3v47_A 261 FKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLL-------------K 327 (455)
T ss_dssp SCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC-------------E
T ss_pred hccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCC-------------E
Confidence 333333333333 6899999999999988899999999999999999999988888898888888 4
Q ss_pred eecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcc
Q 045539 453 LNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKL 532 (897)
Q Consensus 453 l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 532 (897)
|+|++|++++..|..++.+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|++
T Consensus 328 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 407 (455)
T 3v47_A 328 LNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407 (455)
T ss_dssp EECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCc
Confidence 55555666666788899999999999999999988899999999999999999999977677789999999999999999
Q ss_pred cccCCC
Q 045539 533 EGEIPR 538 (897)
Q Consensus 533 ~~~~p~ 538 (897)
++.+|.
T Consensus 408 ~~~~~~ 413 (455)
T 3v47_A 408 DCSCPR 413 (455)
T ss_dssp CCCTTT
T ss_pred ccCCCc
Confidence 998875
No 38
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.3e-44 Score=392.72 Aligned_cols=224 Identities=29% Similarity=0.547 Sum_probs=176.7
Q ss_pred cCChhHHHHHHHHHhccccCCCcccccCCCCCCCCcc--eeeeEeeCCC--CeEEEEEeecccccc--cCCCCCCCCCCC
Q 045539 29 SNITTDQQALLALKAHISYDHTNLFARNWTSSTSVCS--WIGITCDVNS--HRVIGLNISSFNLQG--TIPPQLGNLSSL 102 (897)
Q Consensus 29 ~~~~~~~~aLl~~k~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~g--~~~~~l~~l~~L 102 (897)
.|.++|++||++||+++. ||. .++ +|..+++||+ |.||+|+..+ ++|+.|+|++++++| .+|++++++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~-~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLS-SWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGT-TCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-ccc-CCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 588999999999999995 555 555 9988889998 9999998765 899999999999999 999999999999
Q ss_pred ceecccC-ccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccccccccc
Q 045539 103 QTLDLSH-NKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFAT 181 (897)
Q Consensus 103 ~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~ 181 (897)
++|+|++ |.+++.+|..|+++++|++|+|++|++.+.+|..+.++++|++|||++|++++.+|..|+.+++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9999995 999999999999999999999999999888888888899999999999988888888888888888888888
Q ss_pred ccccccccccccccc-cccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEcccccc
Q 045539 182 NNLVGVAPVTIFNMS-ALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLF 257 (897)
Q Consensus 182 N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 257 (897)
|++++..|..+++++ +|++|+|++|++++.+|..+. .++ |++|+|++|.+++..|..+..+++|+.|+|++|.+
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~-~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 233 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFA-NLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL 233 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGG-GCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEE
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHh-CCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCce
Confidence 888877777777776 777777777777665555443 222 44555555544444444444444444444444443
No 39
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-44 Score=400.30 Aligned_cols=269 Identities=22% Similarity=0.239 Sum_probs=200.8
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecC------CC
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSN------DD 686 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 686 (897)
.++|++.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 368999999999999999999875 69999999997543 3445678899999999999999999998753 46
Q ss_pred ceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 687 FKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 687 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
..|+|||||+ |+|.+++...+ .+++.++..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~yl---H~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYM---HSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 7899999995 67999887654 699999999999999999999 899999999999999999999999999999987
Q ss_pred cCCCCc--eeeeeccccCcccCCcCccCCC-CCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcC--Cc--
Q 045539 767 LSGEDQ--LSIQIQTLATIGYMAPEYGTKG-RVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLL--PV-- 839 (897)
Q Consensus 767 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~--~~-- 839 (897)
+..... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||...... ..+........ +.
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCChHH
Confidence 643221 1223456899999999987764 5699999999999999999999999753111 01111111000 00
Q ss_pred -------hHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 840 -------SVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 840 -------~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.....+...-...+............++.+++.+||..|| ++|||++|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP-~~R~ta~e~L~ 344 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEP-SARISAAAALR 344 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSST-TTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCCh-hHCcCHHHHhc
Confidence 0111111000000000000001123457899999999999 99999999986
No 40
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2e-44 Score=396.08 Aligned_cols=199 Identities=24% Similarity=0.342 Sum_probs=170.4
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec----CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCce
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ----DGMEVAVKVFHQQYERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 688 (897)
+..++|++.+.||+|+||+||+|+.+ +++.||+|++.+... ..++.+|+++++.+ +||||+++++++.+++..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 45688999999999999999999753 467899999875432 35678899999998 599999999999999999
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCC-CcEEEeeccCcccc
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHISDFGIAKLL 767 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~-~~~kL~DFg~a~~~ 767 (897)
|+||||+++|+|.+++. .+++.++..++.|++.||+|| |++||+||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~yl---H~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRI---HQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999884 389999999999999999999 89999999999999999876 79999999999765
Q ss_pred CCCCc--------------------------eeeeeccccCcccCCcCccCCC-CCCccchHHHHHHHHHHHHcCCCCCc
Q 045539 768 SGEDQ--------------------------LSIQIQTLATIGYMAPEYGTKG-RVCTRGDVYSYGIMLMEMFTKKKPTD 820 (897)
Q Consensus 768 ~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvil~elltg~~p~~ 820 (897)
..... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 43211 0112345799999999988765 58999999999999999999999996
Q ss_pred c
Q 045539 821 E 821 (897)
Q Consensus 821 ~ 821 (897)
.
T Consensus 249 ~ 249 (361)
T 4f9c_A 249 K 249 (361)
T ss_dssp C
T ss_pred C
Confidence 4
No 41
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7.9e-44 Score=419.87 Aligned_cols=449 Identities=19% Similarity=0.164 Sum_probs=292.3
Q ss_pred EEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeec
Q 045539 79 IGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSIN 158 (897)
Q Consensus 79 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N 158 (897)
..+|++++++++ +|..+. ++|++|||++|.+++..|..|+++++|++|+|++|++.+..|..|.++++|++|||++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 567888888884 777664 78888888888888777778888888888888888888888888888888888888888
Q ss_pred CCCCCCCccccCcccccccccccccccccc-cccccccccccccccccccccccCCcccccccccc--ceeecccccc--
Q 045539 159 GLSGEMPREIGNLPYLARLAFATNNLVGVA-PVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNV--ETLNLGINSF-- 233 (897)
Q Consensus 159 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L--~~L~L~~N~l-- 233 (897)
+++ .+|.. .+++|++|+|++|+++++. |..|+++++|++|+|++|++++.. +..+++| ++|+|++|.+
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~----~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLD----LLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTT----TGGGTTSCEEEEEEEESSCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCc----hhhhhhceeeEEEeecccccc
Confidence 888 67766 7888888888888888854 578888888888888888887421 2234455 8888888888
Q ss_pred cccccccccCCC-cccEEEccccccccccCcccc----ccccccccCCCC----cccccccccccCCCcEEEecCCCCCC
Q 045539 234 YGTVPSSITNAS-KLSDLELGVNLFSGFIPNTFV----NMADNYLTSSTP----ELSFLSSLTNCKKLKVLILTGNPLDG 304 (897)
Q Consensus 234 ~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~f~----~l~~~~l~~~~~----~~~~l~~l~~l~~L~~L~Ls~N~l~~ 304 (897)
++..|..+..+. ..-.+++++|.+.+.++.... .+....++.+.. -...+..+.++++|+.|+++++.+.+
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECH
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcH
Confidence 777777777654 122456677776655443210 000000000000 00011123344445555554444432
Q ss_pred CCCCcc---cCchHHHHHHHhccCCCCCCcCccc-----cCccCCcEEEccCCCCCCCcc-ccccCc---cchhhhcccC
Q 045539 305 ILPKSK---GNLSLSLEIILMDNCSISGNIPQVV-----GNLGNLLVLELGGNNLTEPIP-ITFSQL---QTLQALGLTR 372 (897)
Q Consensus 305 ~~p~~~---~~l~~~L~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~~-~~~~~l---~~L~~L~Ls~ 372 (897)
.....+ .... +|++|++++|.++|.+|..+ ..+++|+.++++.|.+ . +| ..+..+ .+|+.|++++
T Consensus 264 ~~~~~~~~~~~~~-~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~-~p~~~~~~~~~~~~L~~L~l~~ 340 (562)
T 3a79_B 264 KCSVKLFQFFWPR-PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-L-FSKEALYSVFAEMNIKMLSISD 340 (562)
T ss_dssp HHHHHHHHHHTTS-SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-S-SCHHHHHHHHHTCCCSEEEEES
T ss_pred HHHHHHHHhhhcc-cccEEEEeccEeeccccchhhhcccccchheehhhccccee-e-cChhhhhhhhccCcceEEEccC
Confidence 100000 0000 34445555555555555544 4455555555555554 1 22 222221 3455555555
Q ss_pred cccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCC--ccccccccccceEEeecCCccccc
Q 045539 373 NKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSA--LPSTIWNLKDILFIDVSSNSLNVL 450 (897)
Q Consensus 373 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~ls~N~l~~l 450 (897)
|++.... ....+++|++|++++|++++.+|..++++++|+.|++++|++++. +|..+.++++|+
T Consensus 341 n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~------------ 406 (562)
T 3a79_B 341 TPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLE------------ 406 (562)
T ss_dssp SCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCC------------
T ss_pred CCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCC------------
Confidence 5554221 113455566666666666655556666666666666666666542 234455555555
Q ss_pred ceeecccCcCCCCCcc-cccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccC
Q 045539 451 IGLNFSRNNLSGDIPI-TIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSF 529 (897)
Q Consensus 451 ~~l~ls~n~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 529 (897)
.|++++|++++.+|. .+..+++|++|++++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++
T Consensus 407 -~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~ 482 (562)
T 3a79_B 407 -TLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVAS 482 (562)
T ss_dssp -EEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCS
T ss_pred -EEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCC
Confidence 667777777775555 488899999999999999988887765 78999999999998 7888888999999999999
Q ss_pred CcccccCCC-CCCCCCCCcccccchhhhhh
Q 045539 530 NKLEGEIPR-GGPFANLTAKSFMGNELLKM 558 (897)
Q Consensus 530 N~l~~~~p~-~~~~~~~~~~~~~~N~~~c~ 558 (897)
|++++.++. ...++++..+.+.+|++.|.
T Consensus 483 N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 483 NQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp SCCCCCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred CCCCCCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 999954443 45677888889999998875
No 42
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.5e-44 Score=414.89 Aligned_cols=252 Identities=19% Similarity=0.255 Sum_probs=209.6
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|+++|+.++|||||+++++|.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999999999875 6999999999876666667889999999999999999999999999999999999
Q ss_pred ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCC--CcEEEeeccCccccCCCCc
Q 045539 695 MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDED--MVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 695 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~--~~~kL~DFg~a~~~~~~~~ 772 (897)
|+||+|.+++......+++.++..++.||+.||+|| |++||+||||||+|||++.+ +.+||+|||+|+.+.....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~yl---H~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 999999999987666799999999999999999999 89999999999999999854 8999999999998764432
Q ss_pred eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcch
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRG 852 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 852 (897)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... ..... +.......
T Consensus 313 ---~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--~~~~~-----------i~~~~~~~- 375 (573)
T 3uto_A 313 ---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETLRN-----------VKSCDWNM- 375 (573)
T ss_dssp ---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHH-----------HHTTCCCC-
T ss_pred ---eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHH-----------HHhCCCCC-
Confidence 23457999999999999999999999999999999999999999752111 11111 11100000
Q ss_pred hhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 853 EERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 853 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
+. .....+..++.+++.+||+.|| ++|||++|+++
T Consensus 376 ~~---~~~~~~s~~~~dli~~~L~~dp-~~R~t~~e~l~ 410 (573)
T 3uto_A 376 DD---SAFSGISEDGKDFIRKLLLADP-NTRMTIHQALE 410 (573)
T ss_dssp CS---GGGTTSCHHHHHHHHTTSCSSG-GGSCCHHHHHH
T ss_pred Cc---ccccCCCHHHHHHHHHHccCCh-hHCcCHHHHhc
Confidence 00 0011223457889999999999 99999999987
No 43
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.1e-44 Score=422.31 Aligned_cols=431 Identities=22% Similarity=0.266 Sum_probs=333.3
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEe
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDL 155 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 155 (897)
.+++.|+|++|++++..|.+++++++|++|+|++|++++..|..|+++++|++|+|++|+|.. +|.. .+++|++|||
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc--ccccCCEEEC
Confidence 578999999999998888899999999999999999998889999999999999999999985 4544 8999999999
Q ss_pred eecCCCC-CCCccccCcccccccccccccccccccccccccccc--cccccccccc--cccCCcccccccc-ccceeecc
Q 045539 156 SINGLSG-EMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSAL--KEIYLLNNSL--SGSLPSRIDLSLP-NVETLNLG 229 (897)
Q Consensus 156 s~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~~l~-~L~~L~L~ 229 (897)
++|++++ .+|..|+++++|++|+|++|++++. .+.++++| ++|++++|++ ++..|..+.. +. ..-.++++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~-l~~~~l~l~l~ 204 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQI-PNTTVLHLVFH 204 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEE-CCEEEEEEEEC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccc-cCcceEEEEec
Confidence 9999996 4578999999999999999999874 45556666 9999999999 7777766542 21 12255777
Q ss_pred cccccccccc-cccCCCcccEEEccccc-----cccccCc-------cccccccccccCCCCcccccccccccCCCcEEE
Q 045539 230 INSFYGTVPS-SITNASKLSDLELGVNL-----FSGFIPN-------TFVNMADNYLTSSTPELSFLSSLTNCKKLKVLI 296 (897)
Q Consensus 230 ~N~l~~~~p~-~l~~l~~L~~L~L~~N~-----l~~~~~~-------~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~ 296 (897)
+|.+.+.++. .+..+++|+.|++++|. +.+.++. ....+..+.++... ...+......++|++|+
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~--~~~~~~~~~~~~L~~L~ 282 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKC--SVKLFQFFWPRPVEYLN 282 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHH--HHHHHHHHTTSSEEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHH--HHHHHHhhhcccccEEE
Confidence 7777665543 45567777777777764 1111110 00111111111100 00001112335899999
Q ss_pred ecCCCCCCCCCCcc-----cCchHHHHHHHhccCCCCCCcC-ccccCc---cCCcEEEccCCCCCCCccccccCccchhh
Q 045539 297 LTGNPLDGILPKSK-----GNLSLSLEIILMDNCSISGNIP-QVVGNL---GNLLVLELGGNNLTEPIPITFSQLQTLQA 367 (897)
Q Consensus 297 Ls~N~l~~~~p~~~-----~~l~~~L~~L~l~~n~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 367 (897)
+++|+++|.+|..+ ..+. .|+.+++..|.+ .+| ..+..+ .+|++|++++|.+.... ....+++|++
T Consensus 283 l~~n~l~~~ip~~~~~~~~~~L~-~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~ 357 (562)
T 3a79_B 283 IYNLTITERIDREEFTYSETALK-SLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTF 357 (562)
T ss_dssp EEEEEECSCCCCCCCCCCSCSCC-EEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCE
T ss_pred EeccEeeccccchhhhcccccch-heehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceE
Confidence 99999999888877 5554 555666666666 333 233222 67999999999987532 2368899999
Q ss_pred hcccCcccccccchhhhcccccccccccccccccC--CCcccccccccceeccccccccCCccc-cccccccceEEeecC
Q 045539 368 LGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGS--IPSCLGNLTSLRVLYLGLNRFTSALPS-TIWNLKDILFIDVSS 444 (897)
Q Consensus 368 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ls~ 444 (897)
|++++|++++.+|..+..+++|++|+|++|++++. +|..++++++|+.|++++|++++.+|. .+..+++|+
T Consensus 358 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~------ 431 (562)
T 3a79_B 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL------ 431 (562)
T ss_dssp EECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC------
T ss_pred EECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC------
Confidence 99999999999999999999999999999999963 356799999999999999999985554 577777777
Q ss_pred CcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchh-hhhhcccc
Q 045539 445 NSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPAS-LQKLLYLK 523 (897)
Q Consensus 445 N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~ 523 (897)
.|++++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. +..+++|+
T Consensus 432 -------~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~ 500 (562)
T 3a79_B 432 -------VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQ 500 (562)
T ss_dssp -------EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCC
T ss_pred -------EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCC
Confidence 555666666667776655 79999999999999 78888889999999999999999 67766 99999999
Q ss_pred eEeccCCcccccCC
Q 045539 524 HLNLSFNKLEGEIP 537 (897)
Q Consensus 524 ~L~ls~N~l~~~~p 537 (897)
.|+|++|++.+..|
T Consensus 501 ~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 501 YIWLHDNPWDCTCP 514 (562)
T ss_dssp CEECCSCCBCCCHH
T ss_pred EEEecCCCcCCCcc
Confidence 99999999987655
No 44
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.4e-43 Score=402.02 Aligned_cols=249 Identities=22% Similarity=0.253 Sum_probs=198.0
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH---HHHHHHH---HHHHHHHhcCCCccceEeeeecCCCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE---RALKSFE---DECEVMKRIRHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~ 688 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.+..- .....+. .++++++.++|||||+++++|++++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467999999999999999999876 699999999975431 1122333 446667777899999999999999999
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
|+||||++||+|.+++...+ .+++..+..++.||+.||+|| |++|||||||||+|||++.+|.+||+|||+|+...
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yL---H~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999997654 599999999999999999999 89999999999999999999999999999998765
Q ss_pred CCCceeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhh
Q 045539 769 GEDQLSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDT 847 (897)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 847 (897)
... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||....... ..++...
T Consensus 344 ~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--------------~~~i~~~ 405 (689)
T 3v5w_A 344 KKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--------------KHEIDRM 405 (689)
T ss_dssp SCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--------------HHHHHHH
T ss_pred CCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--------------HHHHHHh
Confidence 432 234689999999999865 579999999999999999999999997632221 1111111
Q ss_pred hhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCC-----HHHHHh
Q 045539 848 NLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGAD-----MGWIFS 891 (897)
Q Consensus 848 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt-----~~evl~ 891 (897)
.....+. .+ ..+..++.+++.+|++.|| ++|++ ++||.+
T Consensus 406 i~~~~~~-~p---~~~S~~a~dLI~~lL~~dP-~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 406 TLTMAVE-LP---DSFSPELRSLLEGLLQRDV-NRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHCCCC-CC---TTSCHHHHHHHHHHTCSCG-GGCTTCSSSTHHHHTT
T ss_pred hcCCCCC-CC---ccCCHHHHHHHHHHccCCH-hHCCCCCCCCHHHHhc
Confidence 1111100 00 1123457899999999999 99998 566543
No 45
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.2e-43 Score=418.25 Aligned_cols=450 Identities=18% Similarity=0.171 Sum_probs=351.1
Q ss_pred eEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEee
Q 045539 77 RVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLS 156 (897)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 156 (897)
+...|||++|++++..+.+|.+|++|++|+|++|+|++..|..|.+|++|++|+|++|++++..+..|+++++|++|+|+
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls 156 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 156 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccc
Confidence 57889999999998888899999999999999999997777889999999999999999999999999999999999999
Q ss_pred ecCCCC-CCCccccCccccccccccccccccccccccccccccc----ccccccccccccCCccccccccccceeecccc
Q 045539 157 INGLSG-EMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALK----EIYLLNNSLSGSLPSRIDLSLPNVETLNLGIN 231 (897)
Q Consensus 157 ~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N 231 (897)
+|++++ .+|..++.+++|++|+|++|+++++.+..|..+.+++ .++++.|.++ .++...+ ....++.+++.+|
T Consensus 157 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~-~i~~~~~-~~~~~~~l~l~~n 234 (635)
T 4g8a_A 157 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAF-KEIRLHKLTLRNN 234 (635)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC-EECTTTT-TTCEEEEEEEESC
T ss_pred cCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCccc-ccCcccc-cchhhhhhhhhcc
Confidence 999986 4688899999999999999999999999998887765 5778999998 5555554 3446677888877
Q ss_pred ccccc-ccccccCCCcccEEEccccccc------cccCccc---------------------------ccccc-ccccCC
Q 045539 232 SFYGT-VPSSITNASKLSDLELGVNLFS------GFIPNTF---------------------------VNMAD-NYLTSS 276 (897)
Q Consensus 232 ~l~~~-~p~~l~~l~~L~~L~L~~N~l~------~~~~~~f---------------------------~~l~~-~~l~~~ 276 (897)
..... .+..+..++.++...+..+... ......+ ..+.. ..+...
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence 65432 2334555555555544322211 1111111 00000 011111
Q ss_pred CCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCC--C
Q 045539 277 TPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTE--P 354 (897)
Q Consensus 277 ~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~ 354 (897)
......+..+....+|+.|++++|.+.+..+..+. .++.+.+.+|.+.... ....+++|+.|++++|.+.. .
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~----~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~ 388 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLK----SLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGC 388 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCT----TCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEE
T ss_pred ccccccccccccchhhhhhhcccccccCcCcccch----hhhhcccccccCCCCc--ccccccccccchhhccccccccc
Confidence 12222334466678899999999998876655443 4556777777766433 34578889999999998864 3
Q ss_pred ccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCC-cccccccccceeccccccccCCccccccc
Q 045539 355 IPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIP-SCLGNLTSLRVLYLGLNRFTSALPSTIWN 433 (897)
Q Consensus 355 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 433 (897)
.+..+..+.+|+.|+++.|.+.. .+..+..+++|+.+++++|+.....+ ..+..+++++.++++.|.+++..|..+..
T Consensus 389 ~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~ 467 (635)
T 4g8a_A 389 CSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 467 (635)
T ss_dssp CCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTT
T ss_pred cccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 44556677888888888888774 45567778888888888887765554 45778888888888888888888888888
Q ss_pred cccceEEeecCCcc------------cccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEE
Q 045539 434 LKDILFIDVSSNSL------------NVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVL 501 (897)
Q Consensus 434 l~~L~~L~ls~N~l------------~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 501 (897)
+++++.|++++|.+ +.|+.|+|++|+|++.+|..|+++++|++|+|++|+|++..|..|.++++|++|
T Consensus 468 ~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 547 (635)
T 4g8a_A 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 547 (635)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEE
T ss_pred chhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEE
Confidence 88888888888752 357789999999999999999999999999999999999889999999999999
Q ss_pred eccCCccCCCCchhhhhh-cccceEeccCCccccc
Q 045539 502 DLSKNKISGAIPASLQKL-LYLKHLNLSFNKLEGE 535 (897)
Q Consensus 502 ~Ls~N~l~~~~p~~~~~l-~~L~~L~ls~N~l~~~ 535 (897)
||++|+|++..|..+..+ ++|+.|+|++|++.+.
T Consensus 548 ~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 548 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp ECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred ECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 999999999999999998 6899999999999863
No 46
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=9.8e-43 Score=381.32 Aligned_cols=286 Identities=33% Similarity=0.550 Sum_probs=234.0
Q ss_pred cccccCCHHHHHHHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHH-HHHHHHHHHHHHHhcCCCccceEee
Q 045539 602 QAIRRFSYHELLRATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYER-ALKSFEDECEVMKRIRHRNLVKIIS 680 (897)
Q Consensus 602 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~ 680 (897)
...+.|++.++..+.++|++.+.||+|+||.||+|+..+|+.||||++...... ....+.+|++++++++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 446789999999999999999999999999999999888999999998755322 2346889999999999999999999
Q ss_pred eecCCCceEEEEEeccCCChhHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEE
Q 045539 681 SCSNDDFKALIMKYMPNGSLENCLYSGT---CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 757 (897)
Q Consensus 681 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~k 757 (897)
++.+++..++||||+++++|.+++.... ..+++..+..++.|++.||+|||..+..||+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999998654 3589999999999999999999554444999999999999999999999
Q ss_pred EeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccc---cCccchhHHhh
Q 045539 758 ISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIF---IGELSLNRWIN 834 (897)
Q Consensus 758 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~---~~~~~~~~~~~ 834 (897)
|+|||++........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||+... .......+|+.
T Consensus 175 l~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 999999987653332 23344569999999999988889999999999999999999999997432 22334455554
Q ss_pred hcCCch-HHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 835 DLLPVS-VMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 835 ~~~~~~-~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
...... ...+.+..+..... .+....+.+++.+||+.|| ++|||++||+++|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~li~~cl~~dP-~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYK------DEEVEQLIQVALLCTQSSP-MERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCC------HHHHHHHHHHHHHHTCSCG-GGSCCHHHHHHHHHT
T ss_pred HHhhchhhhhhcChhhccccC------HHHHHHHHHHHHHHhCcCC-ccCCCHHHHHHHhcC
Confidence 443332 33333333332222 2445678999999999999 999999999999975
No 47
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.7e-43 Score=382.24 Aligned_cols=280 Identities=34% Similarity=0.550 Sum_probs=224.7
Q ss_pred ccCCHHHHHHHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecC
Q 045539 605 RRFSYHELLRATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSN 684 (897)
Q Consensus 605 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 684 (897)
.++++.++..++++|+..+.||+|+||.||+|++.+|+.||+|++........+.+.+|++++++++||||+++++++.+
T Consensus 27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred eeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 34555566678899999999999999999999988899999999876655566789999999999999999999999999
Q ss_pred CCceEEEEEeccCCChhHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeec
Q 045539 685 DDFKALIMKYMPNGSLENCLYSGT---CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDF 761 (897)
Q Consensus 685 ~~~~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DF 761 (897)
++..++||||+++++|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHh---cCCCeecCCCCHHHEEECCCCCEEEeec
Confidence 999999999999999999987654 3589999999999999999999 7899999999999999999999999999
Q ss_pred cCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCc-cchhHHhhhcC-Cc
Q 045539 762 GIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGE-LSLNRWINDLL-PV 839 (897)
Q Consensus 762 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~-~~~~~~~~~~~-~~ 839 (897)
|++................||+.|+|||++.+..++.++||||||+++|||++|+.||......+ .....|..... ..
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 99987543333333344568999999999888899999999999999999999999997643322 22233321111 11
Q ss_pred hHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 840 SVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 840 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
.....+++.+.... ..+...++.+++.+||+.|| ++|||++||++.|+
T Consensus 264 ~~~~~~~~~~~~~~------~~~~~~~l~~li~~~l~~dP-~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 264 QLEQIVDPNLADKI------RPESLRKFGDTAVKCLALSS-EDRPSMGDVLWKLE 311 (321)
T ss_dssp CCCSSSSSSCTTCS------CHHHHHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred cHHHhcChhhcccc------CHHHHHHHHHHHHHHcCCCc-ccCcCHHHHHHHHH
Confidence 11122222221111 12455678999999999999 99999999999886
No 48
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=9.5e-43 Score=397.04 Aligned_cols=376 Identities=25% Similarity=0.302 Sum_probs=219.2
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCC-------------cEEeccCccccCCccc
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTL-------------KLLYFSDNQLFGSLSF 142 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~~~ 142 (897)
.++..++++++++ |.+|++++++++|++|+|++|+++|.+|.+++++++| ++|++++|.+++.+.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~- 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE- 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS-
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC-
Confidence 4678899999999 8999999999999999999999999999999998875 777787777765332
Q ss_pred cccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccc
Q 045539 143 FIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPN 222 (897)
Q Consensus 143 ~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~ 222 (897)
. .++|++|++++|++++ +|.. +++|++|++++|+++++... .++|++|++++|++++ +|. +..+++
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~----~~~L~~L~L~~n~l~~-lp~--~~~l~~ 154 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDL----PPLLEYLGVSNNQLEK-LPE--LQNSSF 154 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSC----CTTCCEEECCSSCCSS-CCC--CTTCTT
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccCC----CCCCCEEECcCCCCCC-Ccc--cCCCCC
Confidence 1 3577777888777775 6643 36777777777777765321 1577777777777774 663 446777
Q ss_pred cceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCC
Q 045539 223 VETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPL 302 (897)
Q Consensus 223 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l 302 (897)
|++|++++|++++ +|..+ ++|++|++++|.+++. |. +.++++|++|++++|++
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~~----------------------~~~l~~L~~L~l~~N~l 207 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-PE----------------------LQNLPFLTAIYADNNSL 207 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-CC----------------------CTTCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-cc----------------------ccCCCCCCEEECCCCcC
Confidence 7777777777764 45433 4777777777777653 21 45667778888888877
Q ss_pred CCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchh
Q 045539 303 DGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDE 382 (897)
Q Consensus 303 ~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 382 (897)
+++ |... .+|++|++++|.++ .+|. ++.+++|++|++++|++++ +|.. .++|+.|++++|++++ +|..
T Consensus 208 ~~l-~~~~----~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~ 275 (454)
T 1jl5_A 208 KKL-PDLP----LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL 275 (454)
T ss_dssp SSC-CCCC----TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC
T ss_pred CcC-CCCc----CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc
Confidence 752 3222 14556666666665 3442 5666666666666666655 3322 2456666666666654 3332
Q ss_pred hhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCC
Q 045539 383 LCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSG 462 (897)
Q Consensus 383 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~ 462 (897)
+++|++|++++|++++ +|.. .++|+.|++++|++++ ++ .++ +.|+.|++++|++++
T Consensus 276 ---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~----~~~------------~~L~~L~Ls~N~l~~ 331 (454)
T 1jl5_A 276 ---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LC----DLP------------PSLEELNVSNNKLIE 331 (454)
T ss_dssp ---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-EC----CCC------------TTCCEEECCSSCCSC
T ss_pred ---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCc-cc----CCc------------CcCCEEECCCCcccc
Confidence 2556666666666654 2211 1455666666666553 11 111 134567777777775
Q ss_pred CCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCC--CCchhhhhh-------------cccceEec
Q 045539 463 DIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISG--AIPASLQKL-------------LYLKHLNL 527 (897)
Q Consensus 463 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l-------------~~L~~L~l 527 (897)
+|.. +++|++|++++|+++ .+|. .+++|++|+|++|++++ .+|.++..+ ++|+.|++
T Consensus 332 -lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~l 403 (454)
T 1jl5_A 332 -LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHV 403 (454)
T ss_dssp -CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-----------------
T ss_pred -cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEEC
Confidence 5554 578899999999998 4676 46889999999999998 788888877 78999999
Q ss_pred cCCcccc--cCCC
Q 045539 528 SFNKLEG--EIPR 538 (897)
Q Consensus 528 s~N~l~~--~~p~ 538 (897)
++|++++ .+|.
T Consensus 404 s~N~l~~~~~iP~ 416 (454)
T 1jl5_A 404 ETNPLREFPDIPE 416 (454)
T ss_dssp -------------
T ss_pred CCCcCCccccchh
Confidence 9999987 6664
No 49
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.7e-42 Score=396.29 Aligned_cols=388 Identities=18% Similarity=0.184 Sum_probs=293.8
Q ss_pred CCCCCCCCcceeeeEeeCC-CCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcC-CccccCCCCCcEEeccC
Q 045539 56 NWTSSTSVCSWIGITCDVN-SHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNI-PSSIFNMHTLKLLYFSD 133 (897)
Q Consensus 56 ~w~~~~~~c~w~gv~c~~~-~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~Ls~ 133 (897)
.|....-.|++.|++.-+. ..+++.|+|++|++++..|.+++++++|++|+|++|.+.+.+ |..|.++++|++|+|++
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 3433333477777765432 357999999999999988999999999999999999998665 56799999999999999
Q ss_pred ccccCCccccccccccccEEEeeecCCCCCCCcc--ccCccccccccccccccccccccc-ccccccccccccccccccc
Q 045539 134 NQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPRE--IGNLPYLARLAFATNNLVGVAPVT-IFNMSALKEIYLLNNSLSG 210 (897)
Q Consensus 134 N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~ 210 (897)
|++.+..|..|.++++|++|+|++|++++.+|.. |+++++|++|+|++|++++..|.. +.++++|++|++++|++++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 9999999999999999999999999999866655 999999999999999999998876 8999999999999999997
Q ss_pred cCCccccc-cccccceeeccccccccccccc--------ccCCCcccEEEccccccccccCccccccccccccCCCCccc
Q 045539 211 SLPSRIDL-SLPNVETLNLGINSFYGTVPSS--------ITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELS 281 (897)
Q Consensus 211 ~~p~~~~~-~l~~L~~L~L~~N~l~~~~p~~--------l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~ 281 (897)
..|..+.. ...+|+.|++++|.+.+..+.. +..+++|++|++++|.+++..|..|...
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~------------- 235 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDA------------- 235 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHH-------------
T ss_pred cChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhcc-------------
Confidence 76765542 2378999999999998766554 3467899999999999999888765321
Q ss_pred ccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCc--cCCcEEEccCCCCCCCccccc
Q 045539 282 FLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNL--GNLLVLELGGNNLTEPIPITF 359 (897)
Q Consensus 282 ~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~ 359 (897)
...++|+.|++++|.+.+... ..+.+.+..+..+..+ ++|++|++++|++
T Consensus 236 -----~~~~~L~~L~l~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l-------- 287 (455)
T 3v47_A 236 -----IAGTKIQSLILSNSYNMGSSF---------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKI-------- 287 (455)
T ss_dssp -----TTTCCEEEEECTTCTTTSCCT---------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCC--------
T ss_pred -----ccccceeeEeecccccccccc---------------chhhhccCcccccccccccCceEEEecCccc--------
Confidence 234789999999998765311 1222222222223222 3455555555544
Q ss_pred cCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceE
Q 045539 360 SQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILF 439 (897)
Q Consensus 360 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 439 (897)
.+..|..+..+++|++|+|++|++++..|..|+++++|+.|+|++|++++..|..+.++++|+
T Consensus 288 ----------------~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~- 350 (455)
T 3v47_A 288 ----------------FALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLE- 350 (455)
T ss_dssp ----------------CEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCC-
T ss_pred ----------------cccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCC-
Confidence 444455555555555555555556555555666666666666666666655566666666666
Q ss_pred EeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCc
Q 045539 440 IDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIP 513 (897)
Q Consensus 440 L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 513 (897)
.|+|++|++++..|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..|
T Consensus 351 ------------~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 351 ------------VLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp ------------EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ------------EEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 34444444555567778888899999999999997667778999999999999999998887
No 50
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.7e-42 Score=393.33 Aligned_cols=370 Identities=26% Similarity=0.329 Sum_probs=267.5
Q ss_pred eEEEEEeecccccccCCCCCCCCCCC-------------ceecccCccccCcCCccccCCCCCcEEeccCccccCCcccc
Q 045539 77 RVIGLNISSFNLQGTIPPQLGNLSSL-------------QTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFF 143 (897)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~l~~l~~L-------------~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 143 (897)
+...|+++++++.|.+|++++++++| ++|++++|++++ +|.. .++|++|++++|++.+ +|..
T Consensus 35 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~ 109 (454)
T 1jl5_A 35 SKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL 109 (454)
T ss_dssp CHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC
T ss_pred chhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc
Confidence 45668899999999999999999875 999999999985 5542 3789999999999988 5543
Q ss_pred ccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCcccccccccc
Q 045539 144 IFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNV 223 (897)
Q Consensus 144 ~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L 223 (897)
+++|++|++++|++++ +|.. .++|++|++++|+++++ | .|+++++|++|++++|+++ .+|.. .++|
T Consensus 110 ---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~-~lp~~----~~~L 175 (454)
T 1jl5_A 110 ---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEKL-P-ELQNSSFLKIIDVDNNSLK-KLPDL----PPSL 175 (454)
T ss_dssp ---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCS-CCCCC----CTTC
T ss_pred ---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCCC-c-ccCCCCCCCEEECCCCcCc-ccCCC----cccc
Confidence 4899999999999985 4432 27999999999999985 5 5999999999999999999 47754 3599
Q ss_pred ceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCC
Q 045539 224 ETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLD 303 (897)
Q Consensus 224 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~ 303 (897)
++|++++|.+++ +| .++++++|++|++++|.+++... ..++|++|++++|+++
T Consensus 176 ~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~-------------------------~~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 176 EFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD-------------------------LPLSLESIVAGNNILE 228 (454)
T ss_dssp CEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC-------------------------CCTTCCEEECCSSCCS
T ss_pred cEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC-------------------------CcCcccEEECcCCcCC
Confidence 999999999987 56 69999999999999999986322 1258999999999999
Q ss_pred CCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhh
Q 045539 304 GILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDEL 383 (897)
Q Consensus 304 ~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 383 (897)
.+| .+..++ +|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|+.|++++|++++. |..
T Consensus 229 -~lp-~~~~l~-~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~- 295 (454)
T 1jl5_A 229 -ELP-ELQNLP-FLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL- 295 (454)
T ss_dssp -SCC-CCTTCT-TCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC-
T ss_pred -ccc-ccCCCC-CCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc-
Confidence 456 477777 89999999999996 4443 4799999999999998 5543 37899999999999972 221
Q ss_pred hcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCC
Q 045539 384 CHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGD 463 (897)
Q Consensus 384 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~ 463 (897)
.++|++|++++|++++ ++.. .++|+.|++++|++++ +|.. +++|++|++++ |+++ .
T Consensus 296 --~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~-------------N~l~-~ 351 (454)
T 1jl5_A 296 --PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIASF-------------NHLA-E 351 (454)
T ss_dssp --CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCS-------------SCCS-C
T ss_pred --CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECCC-------------Cccc-c
Confidence 2689999999999985 3321 2589999999999997 6654 45666555554 4454 2
Q ss_pred CcccccCCcccccccccCceecc--cCCCCCCCc-------------CCCcEEeccCCccCC--CCchhhhhhcccceEe
Q 045539 464 IPITIGGLKNLQQMFLEYNRLEG--SIPESFGDL-------------SSLEVLDLSKNKISG--AIPASLQKLLYLKHLN 526 (897)
Q Consensus 464 ~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~l-------------~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ 526 (897)
+|. .+++|++|++++|++++ .+|.+++.+ ++|+.||+++|++++ .+|.+ ++.|.
T Consensus 352 lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~s------l~~L~ 422 (454)
T 1jl5_A 352 VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPES------VEDLR 422 (454)
T ss_dssp CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------------------------
T ss_pred ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchhh------Hhhee
Confidence 444 35778888888888877 677777777 899999999999997 67765 55667
Q ss_pred ccCCcccccCCC
Q 045539 527 LSFNKLEGEIPR 538 (897)
Q Consensus 527 ls~N~l~~~~p~ 538 (897)
+.+|.+.+.+|.
T Consensus 423 ~~~~~~~~~~~~ 434 (454)
T 1jl5_A 423 MNSERVVDPYEF 434 (454)
T ss_dssp ------------
T ss_pred CcCcccCCcccc
Confidence 889998887764
No 51
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.6e-41 Score=365.95 Aligned_cols=250 Identities=24% Similarity=0.328 Sum_probs=206.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
.++|++.+.||+|+||+||+|... +|+.||+|++........+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 468999999999999999999864 6899999999766555567789999999999999999999999999999999999
Q ss_pred ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCcee
Q 045539 695 MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 774 (897)
Q Consensus 695 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~ 774 (897)
+++++|.+++.... +++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~~~~~~--~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (297)
T ss_dssp CTTCBHHHHHHHSC--CCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred CCCCCHHHHHhhcC--CCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--
Confidence 99999999998764 89999999999999999999 889999999999999999999999999999987654332
Q ss_pred eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhh
Q 045539 775 IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEE 854 (897)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 854 (897)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......... .... .+
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~---------~~~~-~~- 239 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGT---------PELQ-NP- 239 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCS---------CCCS-CG-
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCC---------CCCC-Cc-
Confidence 2334579999999999999999999999999999999999999996521110 0000000000 0000 01
Q ss_pred hhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 855 RFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 855 ~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
+.....+.+++.+||+.|| ++|||++|+++
T Consensus 240 ------~~~~~~~~~li~~~l~~dp-~~Rps~~ell~ 269 (297)
T 3fxz_A 240 ------EKLSAIFRDFLNRCLEMDV-EKRGSAKELLQ 269 (297)
T ss_dssp ------GGSCHHHHHHHHHHSCSST-TTSCCHHHHTT
T ss_pred ------cccCHHHHHHHHHHccCCh-hHCcCHHHHhh
Confidence 1223457899999999999 99999999986
No 52
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.1e-41 Score=371.98 Aligned_cols=271 Identities=23% Similarity=0.286 Sum_probs=208.6
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCC----ceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDD----FKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv 691 (897)
.++|++.+.||+|+||+||+|++. ++.||||++...... .....+|+.++++++||||+++++++.++. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchH-HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 468999999999999999999877 799999999765332 345567999999999999999999997754 36999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC----------CcEeCCCCCCCeeeCCCCcEEEeec
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST----------PIIHCDLKPSNVLLDEDMVAHISDF 761 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~----------~ivH~Dlkp~NIll~~~~~~kL~DF 761 (897)
|||+++|+|.+++.... +++..+..++.|++.||+|| |+. ||+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~L---H~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYL---HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHH---TCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH---HhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999998754 89999999999999999999 777 9999999999999999999999999
Q ss_pred cCccccCCCCceeeeeccccCcccCCcCccCC-----CCCCccchHHHHHHHHHHHHcCCCCCcccccCcc-chhHHhhh
Q 045539 762 GIAKLLSGEDQLSIQIQTLATIGYMAPEYGTK-----GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGEL-SLNRWIND 835 (897)
Q Consensus 762 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~-~~~~~~~~ 835 (897)
|+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .+......
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99987765443333344579999999998876 3567789999999999999999999976433221 11111111
Q ss_pred cCCc-hHHHHh-hhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 836 LLPV-SVMEVI-DTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 836 ~~~~-~~~~~i-~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.... ...+.+ ...........+ .......++.+++.+||+.|| ++|||++||+++|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP-~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYW-QKHAGMAMLCETIEECWDHDA-EARLSAGCVGERITQ 315 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCCCCccccc-cccchHHHHHHHHHHHccCCh-hhCcCHHHHHHHHHH
Confidence 1111 111111 111111111111 112344568999999999999 999999999999863
No 53
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.1e-41 Score=364.85 Aligned_cols=257 Identities=23% Similarity=0.347 Sum_probs=211.6
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
.++|.+.+.||+|+||+||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 468999999999999999999875 5899999998766666778899999999999999999999999999999999999
Q ss_pred ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCcee
Q 045539 695 MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 774 (897)
Q Consensus 695 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~ 774 (897)
+++++|.+++......+++.++..++.|+++||+|| |++||+||||||+||+++.++.+||+|||.+..........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYL---HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 999999999988666799999999999999999999 88999999999999999999999999999998764332211
Q ss_pred ------------eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHH
Q 045539 775 ------------IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVM 842 (897)
Q Consensus 775 ------------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 842 (897)
......||+.|+|||++.+..++.++||||||+++|||++|..|+.......... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~--------~~~~~ 237 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF--------GLNVR 237 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS--------SBCHH
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH--------hhhhh
Confidence 1114569999999999999999999999999999999999999987532221110 01111
Q ss_pred HHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 843 EVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 843 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
...+..... .+..++.+++.+||+.|| ++|||++|+++.|+
T Consensus 238 ~~~~~~~~~----------~~~~~l~~li~~~l~~dP-~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 238 GFLDRYCPP----------NCPPSFFPITVRCCDLDP-EKRPSFVKLEHWLE 278 (310)
T ss_dssp HHHHHTCCT----------TCCTTHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred ccccccCCC----------CCCHHHHHHHHHHccCCh-hhCcCHHHHHHHHH
Confidence 222211111 122347889999999999 99999999999875
No 54
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.1e-40 Score=359.46 Aligned_cols=279 Identities=30% Similarity=0.453 Sum_probs=226.4
Q ss_pred ccccCCHHHHHHHhcCCCcC------CeeecccceEEEEEEecCCceEEEEEechhh----HHHHHHHHHHHHHHHhcCC
Q 045539 603 AIRRFSYHELLRATDRFSEN------NLIGIGSFGSIYVARLQDGMEVAVKVFHQQY----ERALKSFEDECEVMKRIRH 672 (897)
Q Consensus 603 ~~~~~~~~~~~~~~~~y~~~------~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h 672 (897)
....|++.++..++++|... +.||+|+||.||+|+. +++.||+|++.... ....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45779999999999999877 8999999999999987 48899999986432 3345788999999999999
Q ss_pred CccceEeeeecCCCceEEEEEeccCCChhHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee
Q 045539 673 RNLVKIISSCSNDDFKALIMKYMPNGSLENCLYSG--TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL 750 (897)
Q Consensus 673 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll 750 (897)
|||+++++++.+++..++||||+++++|.+++... ...+++..+..++.|++.||+|| |++||+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL---HENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEE
Confidence 99999999999999999999999999999998643 24589999999999999999999 78999999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchh
Q 045539 751 DEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLN 830 (897)
Q Consensus 751 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~ 830 (897)
+.++.+||+|||.+................||+.|+|||...+ .++.++||||||+++|+|++|+.||....... ...
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~ 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLL 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHH
Confidence 9999999999999987654443333445579999999998764 58899999999999999999999997643221 122
Q ss_pred HHhhh--cCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 831 RWIND--LLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 831 ~~~~~--~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.+... .....+.+.+++.+...+ ......+.+++.+||+.|| ++|||++||++.|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~~p-~~Rps~~~l~~~L~~ 303 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMNDAD-------STSVEAMYSVASQCLHEKK-NKRPDIKKVQQLLQE 303 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSCCC-------HHHHHHHHHHHHHHTCSST-TTSCCHHHHHHHHHH
T ss_pred HHHHHhhhhhhhhhhhccccccccc-------hHHHHHHHHHHHHHcCCCc-ccCcCHHHHHHHHHH
Confidence 22111 111224444444433222 2345668899999999999 999999999998863
No 55
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-41 Score=365.39 Aligned_cols=251 Identities=18% Similarity=0.242 Sum_probs=208.0
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 578999999999999999999876 58899999987543 3346788999999999999999999999999999999999
Q ss_pred ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC--CCcEEEeeccCccccCCCCc
Q 045539 695 MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE--DMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 695 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~--~~~~kL~DFg~a~~~~~~~~ 772 (897)
+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++. ++.+||+|||++........
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL---HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 999999999987766799999999999999999999 8899999999999999987 78999999999987754432
Q ss_pred eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcch
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRG 852 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 852 (897)
.....||+.|+|||++.+..++.++||||+||++|+|++|..||...... +.+.......
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----------------~~~~~i~~~~ 219 (321)
T 1tki_A 160 ---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----------------QIIENIMNAE 219 (321)
T ss_dssp ---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----------------HHHHHHHHTC
T ss_pred ---cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-----------------HHHHHHHcCC
Confidence 23456899999999998888999999999999999999999999752111 1111111111
Q ss_pred hhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 853 EERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 853 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
+............++.+++.+|+..|| ++|||++|+++
T Consensus 220 ~~~~~~~~~~~s~~~~~li~~~L~~dp-~~Rpt~~e~l~ 257 (321)
T 1tki_A 220 YTFDEEAFKEISIEAMDFVDRLLVKER-KSRMTASEALQ 257 (321)
T ss_dssp CCCCHHHHTTSCHHHHHHHHTTSCSSG-GGSCCHHHHHH
T ss_pred CCCChhhhccCCHHHHHHHHHHcCCCh-hHCcCHHHHhc
Confidence 110111122344568899999999999 99999999987
No 56
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.8e-41 Score=373.58 Aligned_cols=256 Identities=24% Similarity=0.419 Sum_probs=208.5
Q ss_pred hcCCCcCCeeecccceEEEEEEec--------CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCccceEeeeecCC
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ--------DGMEVAVKVFHQQY-ERALKSFEDECEVMKRI-RHRNLVKIISSCSND 685 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 685 (897)
.++|++.+.||+|+||.||+|++. ++..||+|+++... ....+.+.+|+++++++ +||||+++++++.++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 468999999999999999999752 35679999997553 34567899999999999 899999999999999
Q ss_pred CceEEEEEeccCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee
Q 045539 686 DFKALIMKYMPNGSLENCLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL 750 (897)
Q Consensus 686 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll 750 (897)
+..|+||||+++|+|.+++.... ..+++.++..++.||+.||+|| |++||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCeeccccchhhEEE
Confidence 99999999999999999987653 3478999999999999999999 88999999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccch
Q 045539 751 DEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSL 829 (897)
Q Consensus 751 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~ 829 (897)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~- 313 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--E- 313 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G-
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--H-
Confidence 9999999999999987654433233334457889999999988899999999999999999999 99998763211 1
Q ss_pred hHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 830 NRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 830 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
....+........+ ..+..++.+++.+||+.|| ++|||++|+++.|++
T Consensus 314 -----------~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dP-~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 314 -----------LFKLLKEGHRMDKP------ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDR 361 (370)
T ss_dssp -----------HHHHHHTTCCCCCC------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred -----------HHHHHhcCCCCCCC------CCCCHHHHHHHHHHcCCCh-hhCcCHHHHHHHHHH
Confidence 11111111110000 1223457899999999999 999999999998863
No 57
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.7e-41 Score=381.63 Aligned_cols=359 Identities=18% Similarity=0.181 Sum_probs=231.3
Q ss_pred CCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcc
Q 045539 93 PPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLP 172 (897)
Q Consensus 93 ~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~ 172 (897)
+.+++++++|++|||++|.+++ +| .++.+++|++|+|++|++.+. + ++.+++|++|+|++|++++ +| +++++
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~ 106 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLT 106 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCT
T ss_pred ccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCC
Confidence 3344555555555555555553 23 455555555555555555543 2 5555555555555555554 22 55555
Q ss_pred cccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEc
Q 045539 173 YLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLEL 252 (897)
Q Consensus 173 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 252 (897)
+|++|++++|+++++ | ++++++|++|++++|++++ ++ ...+++|++|++++|...+.+ .+..+++|+.|++
T Consensus 107 ~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~-l~---l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 107 KLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTE-ID---VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp TCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSC-CC---CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred cCCEEECCCCcCCee-c--CCCCCcCCEEECCCCccce-ec---cccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 555555555555554 2 5555555555555555553 22 224555555555555433333 3455555555555
Q ss_pred cccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcC
Q 045539 253 GVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIP 332 (897)
Q Consensus 253 ~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p 332 (897)
++|++++. | +..+++|+.|++++|++++. .+..++ +|+.|++++|++++ +|
T Consensus 178 s~n~l~~l-~-----------------------l~~l~~L~~L~l~~N~l~~~---~l~~l~-~L~~L~Ls~N~l~~-ip 228 (457)
T 3bz5_A 178 SFNKITEL-D-----------------------VSQNKLLNRLNCDTNNITKL---DLNQNI-QLTFLDCSSNKLTE-ID 228 (457)
T ss_dssp CSSCCCCC-C-----------------------CTTCTTCCEEECCSSCCSCC---CCTTCT-TCSEEECCSSCCSC-CC
T ss_pred CCCcccee-c-----------------------cccCCCCCEEECcCCcCCee---ccccCC-CCCEEECcCCcccc-cC
Confidence 55555542 1 23445555555555555543 122222 33344444444443 23
Q ss_pred ccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccc
Q 045539 333 QVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTS 412 (897)
Q Consensus 333 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 412 (897)
++.+++|++|++++|++++.. ++.+++|+.|++++| +|+.|++++|++.+.+| ++.+++
T Consensus 229 --~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~ 287 (457)
T 3bz5_A 229 --VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRK 287 (457)
T ss_dssp --CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTT
T ss_pred --ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--cccccc
Confidence 556677777777777777743 345556666666655 45668999999888877 578899
Q ss_pred cceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCC
Q 045539 413 LRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESF 492 (897)
Q Consensus 413 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 492 (897)
|+.|++++|.+.+.+|. ...+|+.|++++| +.|+.|++++|++++. + ++.+++|+.|++++|+|++
T Consensus 288 L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~--~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~------ 353 (457)
T 3bz5_A 288 IKELDVTHNTQLYLLDC---QAAGITELDLSQN--PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD------ 353 (457)
T ss_dssp CCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC--TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB------
T ss_pred CCEEECCCCcccceecc---CCCcceEechhhc--ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC------
Confidence 99999999998888885 4567788888887 5788999999999984 3 8999999999999999996
Q ss_pred CCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcccccCCCC
Q 045539 493 GDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIPRG 539 (897)
Q Consensus 493 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 539 (897)
++.|+.|++++|+++|. .++..|..+++++|+|+|.||..
T Consensus 354 --l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 354 --FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp --CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred --ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 25677889999999976 46778899999999999999963
No 58
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8.3e-41 Score=364.55 Aligned_cols=262 Identities=23% Similarity=0.286 Sum_probs=213.9
Q ss_pred ccCCHHHHHHHhcC----------CCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCC
Q 045539 605 RRFSYHELLRATDR----------FSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHR 673 (897)
Q Consensus 605 ~~~~~~~~~~~~~~----------y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 673 (897)
..++++++..+++. |...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45788888888764 677789999999999999876 6999999999866555567889999999999999
Q ss_pred ccceEeeeecCCCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCC
Q 045539 674 NLVKIISSCSNDDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDED 753 (897)
Q Consensus 674 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~ 753 (897)
||+++++++..++..++||||+++++|.+++... .+++..+..++.|++.||+|| |++||+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYL---HAQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999998764 489999999999999999999 78999999999999999999
Q ss_pred CcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHh
Q 045539 754 MVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWI 833 (897)
Q Consensus 754 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~ 833 (897)
+.+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~~~ 253 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRL 253 (321)
T ss_dssp CCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHH
T ss_pred CcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 9999999999987653322 223457999999999999999999999999999999999999999752111 111111
Q ss_pred hhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 834 NDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 834 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
....+. .+.. .......+.+++.+||+.|| ++|||++|+++.
T Consensus 254 ~~~~~~--------~~~~--------~~~~~~~l~~li~~~l~~dp-~~Rps~~ell~h 295 (321)
T 2c30_A 254 RDSPPP--------KLKN--------SHKVSPVLRDFLERMLVRDP-QERATAQELLDH 295 (321)
T ss_dssp HHSSCC--------CCTT--------GGGSCHHHHHHHHHHSCSST-TTSCCHHHHHTS
T ss_pred hcCCCC--------CcCc--------cccCCHHHHHHHHHHccCCh-hhCcCHHHHhcC
Confidence 110000 0000 01123457889999999999 999999999873
No 59
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.1e-40 Score=363.94 Aligned_cols=248 Identities=24% Similarity=0.310 Sum_probs=204.8
Q ss_pred hcCCCcCCeeecccceEEEEEEe-cCCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-QDGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
.++|++.+.||+|+||.||+|++ .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 56899999999999999999987 479999999987543 345677889999999999999999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
||+++++|.+++...+ .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++........
T Consensus 94 e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYC---HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp CCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred ECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 9999999999987654 489999999999999999999 889999999999999999999999999999987654322
Q ss_pred eeeeeccccCcccCCcCccCCCCCC-ccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRVC-TRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
.....||+.|+|||++.+..+. +++||||+||++|||++|+.||..... .++.......
T Consensus 170 ---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----------------~~~~~~i~~~ 229 (328)
T 3fe3_A 170 ---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-----------------KELRERVLRG 229 (328)
T ss_dssp ---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------------HHHHHHHHHC
T ss_pred ---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-----------------HHHHHHHHhC
Confidence 2345799999999998877764 899999999999999999999976211 1111111111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
.+.. + .....++.+++.+|++.|| ++|||++|+++.
T Consensus 230 ~~~~-p---~~~s~~~~~li~~~L~~dP-~~R~t~~eil~h 265 (328)
T 3fe3_A 230 KYRI-P---FYMSTDCENLLKRFLVLNP-IKRGTLEQIMKD 265 (328)
T ss_dssp CCCC-C---TTSCHHHHHHHHHHCCSST-TTSCCHHHHTTC
T ss_pred CCCC-C---CCCCHHHHHHHHHHCCCCh-hHCcCHHHHhcC
Confidence 1100 0 0122447789999999999 999999999864
No 60
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.2e-40 Score=365.79 Aligned_cols=252 Identities=18% Similarity=0.251 Sum_probs=206.1
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHH------HHHHHHHHHHHHHhcCCCccceEeeeecCCCc
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYER------ALKSFEDECEVMKRIRHRNLVKIISSCSNDDF 687 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 687 (897)
..++|++.+.||+|+||.||+|+.. +|+.||+|++++.... ..+.+.+|+.++++++||||+++++++.+++.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3568999999999999999999876 6899999998754321 34678999999999999999999999999999
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC----cEEEeeccC
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM----VAHISDFGI 763 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~----~~kL~DFg~ 763 (897)
.|+||||+++|+|.+++.... .+++.++..++.||+.||+|| |++||+||||||+||+++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 999999999999999997654 589999999999999999999 789999999999999998776 799999999
Q ss_pred ccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHH
Q 045539 764 AKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVME 843 (897)
Q Consensus 764 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (897)
+........ .....||+.|+|||++.+..++.++||||+||++|+|++|..||...... +
T Consensus 166 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-----------------~ 225 (361)
T 2yab_A 166 AHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-----------------E 225 (361)
T ss_dssp CEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-----------------H
T ss_pred ceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-----------------H
Confidence 987654322 23456999999999999889999999999999999999999999752111 1
Q ss_pred HhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 844 VIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 844 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.+.......+.............+.+++.+|+..|| ++|||++|+++
T Consensus 226 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP-~~R~t~~e~l~ 272 (361)
T 2yab_A 226 TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKET-RKRLTIQEALR 272 (361)
T ss_dssp HHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSST-TTSCCHHHHHT
T ss_pred HHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCCh-hHCcCHHHHhc
Confidence 111111111100011112334567899999999999 99999999986
No 61
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=8.4e-41 Score=365.22 Aligned_cols=255 Identities=24% Similarity=0.418 Sum_probs=206.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec----CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ----DGMEVAVKVFHQQ-YERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
.++|++.+.||+|+||.||+|++. .+..||||+++.. .....+.+.+|++++++++||||+++++++.+++..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 357889999999999999999874 3456999999764 34456789999999999999999999999999999999
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
||||+++++|.+++......+++.++..++.|++.||+|| |+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 9999999999999987766799999999999999999999 8899999999999999999999999999999876543
Q ss_pred Cc-eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 771 DQ-LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 771 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
.. ........+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... . ....+...
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~------------~~~~~~~~ 270 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--D------------VISSVEEG 270 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--H------------HHHHHHTT
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--H------------HHHHHHcC
Confidence 22 122233456788999999988899999999999999999999 99999653111 0 11111111
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
...... ..+..++.+++.+||+.|| ++|||++||++.|+
T Consensus 271 ~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~eil~~L~ 309 (325)
T 3kul_A 271 YRLPAP------MGCPHALHQLMLDCWHKDR-AQRPRFSQIVSVLD 309 (325)
T ss_dssp CCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred CCCCCC------CCcCHHHHHHHHHHccCCh-hhCcCHHHHHHHHH
Confidence 110000 1233458899999999999 99999999999885
No 62
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.5e-40 Score=362.79 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=205.2
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999876 68999999986443 2334678899999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
|+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.........
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999987654 589999999999999999999 8899999999999999999999999999999876543333
Q ss_pred eeeeccccCcccCCcCccCCCCC-CccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcch
Q 045539 774 SIQIQTLATIGYMAPEYGTKGRV-CTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRG 852 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 852 (897)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||............+....... .
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------------~ 229 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL------------N 229 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS------------T
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC------------C
Confidence 33345679999999999877665 7899999999999999999999976433222222222111100 0
Q ss_pred hhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 853 EERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 853 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
+ ......++.+++.+|++.|| ++|||++|+++.
T Consensus 230 ~------~~~~~~~~~~li~~~L~~dP-~~R~t~~eil~h 262 (323)
T 3tki_A 230 P------WKKIDSAPLALLHKILVENP-SARITIPDIKKD 262 (323)
T ss_dssp T------GGGSCHHHHHHHHHHSCSST-TTSCCHHHHTTC
T ss_pred c------cccCCHHHHHHHHHHccCCh-hhCcCHHHHhhC
Confidence 0 01223456789999999999 999999999864
No 63
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=8.4e-41 Score=362.32 Aligned_cols=255 Identities=26% Similarity=0.372 Sum_probs=199.4
Q ss_pred HHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
...++|++.+.||+|+||+||+|++. |+.||||++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 34578999999999999999999874 8899999986543 34457889999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 692 MKYMPNGSLENCLYSGT--CMLDIFQRLNIMIDVALALEYLHFGHSTP--IIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~--ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
|||+++++|.+++.... ..+++..+..++.|++.||+|| |++| |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL---HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH---HTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH---HcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 99999999999998754 2489999999999999999999 7888 999999999999999999999999999765
Q ss_pred CCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhh
Q 045539 768 SGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDT 847 (897)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 847 (897)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+ ...
T Consensus 190 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~-----------~~~ 254 (309)
T 3p86_A 190 ASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAV-----------GFK 254 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHH-----------HHS
T ss_pred cccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH-----------Hhc
Confidence 4321 2223456899999999999999999999999999999999999999763111 000000 000
Q ss_pred hhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 848 NLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 848 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
......+ ..+..++.+++.+||+.|| ++|||++|+++.|+
T Consensus 255 ~~~~~~~------~~~~~~l~~li~~~l~~dP-~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 255 CKRLEIP------RNLNPQVAAIIEGCWTNEP-WKRPSFATIMDLLR 294 (309)
T ss_dssp CCCCCCC------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred CCCCCCC------ccCCHHHHHHHHHHccCCh-hhCcCHHHHHHHHH
Confidence 0000000 1123457899999999999 99999999999875
No 64
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=366.05 Aligned_cols=251 Identities=22% Similarity=0.309 Sum_probs=196.3
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
..++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 4678999999999999999999864 69999999987543 233467889999999999999999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||++++++.+||+|||++........
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYV---HSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 9999999999987654 589999999999999999999 889999999999999999999999999999876543322
Q ss_pred eeeeeccccCcccCCcCccCCCCC-CccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRV-CTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... .+........
T Consensus 164 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-----------------~~~~~~i~~~ 225 (347)
T 3zgw_A 164 -YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-----------------MALYKKIMRG 225 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-----------------HHHHHHHHHT
T ss_pred -ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-----------------HHHHHHHHcC
Confidence 22334579999999999887775 8999999999999999999999975211 1111111111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
.+.. . .....++.+++.+||+.|| ++|||++|+++.
T Consensus 226 ~~~~-p---~~~s~~~~~li~~~L~~dP-~~Rps~~eil~h 261 (347)
T 3zgw_A 226 KYDV-P---KWLSPSSILLLQQMLQVDP-KKRISMKNLLNH 261 (347)
T ss_dssp CCCC-C---TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHTC
T ss_pred CCCC-C---CCCCHHHHHHHHHHcccCH-hHCcCHHHHhcC
Confidence 1000 0 0122346789999999999 999999999863
No 65
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.5e-40 Score=353.04 Aligned_cols=254 Identities=25% Similarity=0.396 Sum_probs=209.5
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEec
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKYM 695 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 695 (897)
.++|++.+.||+|+||.||+|++.++..||+|+++.... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 568999999999999999999998888999999975532 2366889999999999999999999999999999999999
Q ss_pred cCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCceee
Q 045539 696 PNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSI 775 (897)
Q Consensus 696 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~ 775 (897)
++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+........ ..
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL---ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-EE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCcCcceEEECCCCCEEEccCccceecchhhh-hc
Confidence 99999999987766799999999999999999999 889999999999999999999999999999987654332 23
Q ss_pred eeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhh
Q 045539 776 QIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEE 854 (897)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 854 (897)
.....+|+.|+|||...+..++.++||||+|+++|||++ |+.||....... .. ..+........+.
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~-----------~~~~~~~~~~~~~ 228 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--VV-----------LKVSQGHRLYRPH 228 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HH-----------HHHHTTCCCCCCT
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH--HH-----------HHHHcCCCCCCCC
Confidence 334456788999999988889999999999999999999 999987532110 00 0011000000010
Q ss_pred hhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 855 RFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 855 ~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.....+.+++.+||+.|| ++|||++|+++.|++
T Consensus 229 -------~~~~~l~~li~~~l~~~p-~~Rps~~~ll~~L~~ 261 (268)
T 3sxs_A 229 -------LASDTIYQIMYSCWHELP-EKRPTFQQLLSSIEP 261 (268)
T ss_dssp -------TSCHHHHHHHHHTTCSSG-GGSCCHHHHHHHHGG
T ss_pred -------cChHHHHHHHHHHcCCCh-hhCcCHHHHHHHHHH
Confidence 112357899999999999 999999999999864
No 66
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.8e-40 Score=357.31 Aligned_cols=258 Identities=27% Similarity=0.399 Sum_probs=203.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechh---hHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQ---YERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 468999999999999999999865 6899999998532 244567889999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHA---HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999987654 589999999999999999999 88999999999999999999999999999998764332
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
. .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........ ..+.+....+. ...
T Consensus 166 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~-~~~-------- 234 (294)
T 4eqm_A 166 L-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-AIKHIQDSVPN-VTT-------- 234 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-HHHHHSSCCCC-HHH--------
T ss_pred c-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhhccCCC-cch--------
Confidence 1 223345699999999999988999999999999999999999999976311100 00011111110 000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCC-CHHHHHhhcCC
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGA-DMGWIFSALDP 895 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RP-t~~evl~~L~~ 895 (897)
.........+.+++.+|++.|| ++|| +++++.+.|++
T Consensus 235 ------~~~~~~~~~l~~li~~~l~~dp-~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 235 ------DVRKDIPQSLSNVILRATEKDK-ANRYKTIQEMKDDLSS 272 (294)
T ss_dssp ------HSCTTSCHHHHHHHHHHSCSSG-GGSCSSHHHHHHHHHT
T ss_pred ------hcccCCCHHHHHHHHHHhcCCH-hHccccHHHHHHHHHH
Confidence 0011234568899999999999 9999 88888887754
No 67
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1e-40 Score=354.53 Aligned_cols=254 Identities=23% Similarity=0.393 Sum_probs=208.7
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEec
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKYM 695 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 695 (897)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 468999999999999999999998889999999976532 2367889999999999999999999999999999999999
Q ss_pred cCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCceee
Q 045539 696 PNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSI 775 (897)
Q Consensus 696 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~ 775 (897)
++++|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++....... ...
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 163 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 163 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHH---HhCCeecCCcchheEEEcCCCCEEeccccccccccccc-ccc
Confidence 99999999988777799999999999999999999 88999999999999999999999999999998664322 112
Q ss_pred eeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhh
Q 045539 776 QIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEE 854 (897)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 854 (897)
.....+|+.|+|||...+..++.++||||+|+++|||++ |+.||...... .. .+.+........+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~------------~~~~~~~~~~~~~ 229 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EV------------VEDISTGFRLYKP 229 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HH------------HHHHHTTCCCCCC
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HH------------HHHHhcCccCCCC
Confidence 233456788999999988899999999999999999999 99998753111 11 1111111010000
Q ss_pred hhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 855 RFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 855 ~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
......+.+++.+||+.|| ++|||++|+++.|++
T Consensus 230 ------~~~~~~~~~li~~~l~~~p-~~Rps~~~ll~~l~~ 263 (269)
T 4hcu_A 230 ------RLASTHVYQIMNHCWRERP-EDRPAFSRLLRQLAE 263 (269)
T ss_dssp ------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred ------CcCCHHHHHHHHHHccCCc-ccCcCHHHHHHHHHH
Confidence 0112457899999999999 999999999998863
No 68
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.9e-41 Score=375.75 Aligned_cols=257 Identities=26% Similarity=0.382 Sum_probs=208.9
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
..++|.+.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3568999999999999999999986 68999999987543 334567889999999999999999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
||+++|+|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.......
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 99999999999987666799999999999999999999 889999999999999999999999999999986543221
Q ss_pred eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
........+++.|+|||.+..+.++.++|||||||++|||++ |..||...... . ..+.+......
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~------------~~~~~~~~~~~ 334 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--Q------------TREFVEKGGRL 334 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--H------------HHHHHHTTCCC
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--H------------HHHHHHcCCCC
Confidence 111112235778999999988889999999999999999998 99998763211 1 11112111111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
..+ +.+..++.+++.+||+.|| ++|||++||++.|++
T Consensus 335 ~~~------~~~~~~l~~li~~cl~~dP-~~Rps~~~i~~~L~~ 371 (377)
T 3cbl_A 335 PCP------ELCPDAVFRLMEQCWAYEP-GQRPSFSTIYQELQS 371 (377)
T ss_dssp CCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred CCC------CCCCHHHHHHHHHHcCCCc-hhCcCHHHHHHHHHH
Confidence 110 1223457899999999999 999999999998853
No 69
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.1e-40 Score=364.68 Aligned_cols=252 Identities=19% Similarity=0.237 Sum_probs=204.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHH-----HHHHHHHHHHHHHhcCCCccceEeeeecCCCceE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYER-----ALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKA 689 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 689 (897)
.++|++.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 468999999999999999999875 6899999998754321 3577899999999999999999999999999999
Q ss_pred EEEEeccCCChhHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc---EEEeeccC
Q 045539 690 LIMKYMPNGSLENCLYSG---TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV---AHISDFGI 763 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~---~kL~DFg~ 763 (897)
+||||+++++|.+++... ...+++..+..++.||+.||+|| |++||+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC---HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999998877543 23589999999999999999999 8899999999999999986654 99999999
Q ss_pred ccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHH
Q 045539 764 AKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVME 843 (897)
Q Consensus 764 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (897)
+........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .. ...
T Consensus 180 a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~------------~~~ 243 (351)
T 3c0i_A 180 AIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RL------------FEG 243 (351)
T ss_dssp CEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HH------------HHH
T ss_pred eeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HH------------HHH
Confidence 987654322 22345799999999999988999999999999999999999999975210 00 011
Q ss_pred HhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 844 VIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 844 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
+....... ..........++.+++.+||+.|| ++|||+.|+++
T Consensus 244 i~~~~~~~----~~~~~~~~s~~~~~li~~~L~~dP-~~R~s~~e~l~ 286 (351)
T 3c0i_A 244 IIKGKYKM----NPRQWSHISESAKDLVRRMLMLDP-AERITVYEALN 286 (351)
T ss_dssp HHHTCCCC----CHHHHTTSCHHHHHHHHHHTCSST-TTSCCHHHHHT
T ss_pred HHcCCCCC----CccccccCCHHHHHHHHHHCCCCh-hHCcCHHHHhc
Confidence 11111111 111122334568899999999999 99999999986
No 70
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6.2e-40 Score=356.08 Aligned_cols=268 Identities=19% Similarity=0.257 Sum_probs=204.2
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYE--RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
.++|++.+.||+|+||+||+|++.+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 578999999999999999999998899999999875432 234678899999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
|+++ +|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++........
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC---HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 9974 88888877776799999999999999999999 889999999999999999999999999999987643322
Q ss_pred eeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhh---hcCCchHHH------
Q 045539 774 SIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIN---DLLPVSVME------ 843 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~------ 843 (897)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ....... ...+.....
T Consensus 175 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 175 -SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred -cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhccch
Confidence 2334568999999998765 568999999999999999999999997633221 1111111 000000000
Q ss_pred Hhhhhhcchhh-hhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 844 VIDTNLLRGEE-RFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 844 ~i~~~l~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
........... ...........++.+++.+|++.|| ++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~ell~ 300 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDP-NKRISARDAMN 300 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCT-TTSCCHHHHHT
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCCh-hHCCCHHHHhc
Confidence 00000000000 0001111223467899999999999 99999999987
No 71
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-40 Score=367.75 Aligned_cols=253 Identities=18% Similarity=0.243 Sum_probs=207.8
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+++..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 468999999999999999999876 6899999999866555567889999999999999999999999999999999999
Q ss_pred ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC--CCcEEEeeccCccccCCCCc
Q 045539 695 MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE--DMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 695 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~--~~~~kL~DFg~a~~~~~~~~ 772 (897)
+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++. ++.+||+|||++........
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM---HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 999999999987766799999999999999999999 8899999999999999974 57899999999987754432
Q ss_pred eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcch
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRG 852 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 852 (897)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .+........
T Consensus 207 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~-----------~i~~~~~~~~ 270 (387)
T 1kob_A 207 ---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQ-----------NVKRCDWEFD 270 (387)
T ss_dssp ---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHH-----------HHHHCCCCCC
T ss_pred ---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--HHHH-----------HHHhCCCCCC
Confidence 22346999999999999999999999999999999999999999752111 0000 0000000000
Q ss_pred hhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 853 EERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 853 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
. ........++.+++.+||+.|| ++|||++|+++.
T Consensus 271 ~----~~~~~~s~~~~~li~~~L~~dP-~~Rpt~~ell~h 305 (387)
T 1kob_A 271 E----DAFSSVSPEAKDFIKNLLQKEP-RKRLTVHDALEH 305 (387)
T ss_dssp S----STTTTSCHHHHHHHHTTSCSSG-GGSCCHHHHHTS
T ss_pred c----cccccCCHHHHHHHHHHcCCCh-hHCcCHHHHhhC
Confidence 0 0001223457899999999999 999999999874
No 72
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.3e-41 Score=362.71 Aligned_cols=270 Identities=26% Similarity=0.408 Sum_probs=207.2
Q ss_pred hcCCCcCCeeecccceEEEEEEe-----cCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecC--CCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-----QDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSN--DDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 688 (897)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46899999999999999999984 2588999999987766667889999999999999999999999854 3568
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
++||||+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++....
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 999999999999999988776799999999999999999999 78999999999999999999999999999998765
Q ss_pred CCCce-eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCch--HHHHh
Q 045539 769 GEDQL-SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVS--VMEVI 845 (897)
Q Consensus 769 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~i 845 (897)
..... .......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ..+......... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHH
Confidence 43221 2223345778899999998889999999999999999999999998753211 111111111110 11111
Q ss_pred hhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 846 DTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 846 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
+....... .+....+..++.+++.+||+.|| ++|||++|++++|++
T Consensus 243 ~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp-~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 243 ELLKNNGR---LPRPDGCPDEIYMIMTECWNNNV-NQRPSFRDLALRVDQ 288 (295)
T ss_dssp HHHHTTCC---CCCCTTCCHHHHHHHHHHSCSSG-GGSCCHHHHHHHHHH
T ss_pred HHHhccCc---CCCCcCcCHHHHHHHHHHcCCCh-hhCCCHHHHHHHHHH
Confidence 11110000 00011234568899999999999 999999999998853
No 73
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.6e-40 Score=369.66 Aligned_cols=255 Identities=24% Similarity=0.458 Sum_probs=197.4
Q ss_pred hcCCCcCCeeecccceEEEEEEec----CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ----DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
.++|++.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 458999999999999999999865 47789999997543 4455789999999999999999999999999999999
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
||||+++++|.+++......+++.++..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 9999999999999988777799999999999999999999 7899999999999999999999999999999876533
Q ss_pred Ccee-eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 771 DQLS-IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 771 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
.... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--------------~~~~~i~~~ 266 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--------------DVIKAVDEG 266 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--------------HHHHHHHTT
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------------HHHHHHHcC
Confidence 2211 1122345778999999988899999999999999999998 99999653111 111122211
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
...... ..+..++.+++.+||+.|| ++||+++||++.|+
T Consensus 267 ~~~~~~------~~~~~~l~~li~~cl~~dp-~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 267 YRLPPP------MDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILD 305 (373)
T ss_dssp EECCCC------TTCBHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred CCCCCC------ccccHHHHHHHHHHhCcCh-hhCcCHHHHHHHHH
Confidence 111111 1233558899999999999 99999999999875
No 74
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=373.46 Aligned_cols=255 Identities=19% Similarity=0.257 Sum_probs=205.1
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
...++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..|+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 34678999999999999999999765 68999999986543 3445778999999999999999999999999999999
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeC---CCCcEEEeeccCcccc
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLD---EDMVAHISDFGIAKLL 767 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~---~~~~~kL~DFg~a~~~ 767 (897)
||||+++|+|.+++.... .+++.++..++.||+.||+|| |++||+||||||+||+++ .++.+||+|||++...
T Consensus 88 v~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~l---H~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHC---HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 999999999999988765 589999999999999999999 889999999999999998 5678999999999876
Q ss_pred CCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhh
Q 045539 768 SGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDT 847 (897)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 847 (897)
..... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .... .+...
T Consensus 164 ~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--~~~~-----------~i~~~ 228 (444)
T 3soa_A 164 EGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLYQ-----------QIKAG 228 (444)
T ss_dssp CTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHH-----------HHHHT
T ss_pred cCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--HHHH-----------HHHhC
Confidence 54322 223457999999999999989999999999999999999999999652111 0100 11110
Q ss_pred hhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 848 NLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 848 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
... .+. +....+..++.+++.+|++.|| ++|||++|+++.
T Consensus 229 ~~~-~~~---~~~~~~s~~~~~li~~~L~~dP-~~Rpta~e~L~h 268 (444)
T 3soa_A 229 AYD-FPS---PEWDTVTPEAKDLINKMLTINP-SKRITAAEALKH 268 (444)
T ss_dssp CCC-CCT---TTTTTSCHHHHHHHHHHSCSST-TTSCCHHHHHHS
T ss_pred CCC-CCc---cccccCCHHHHHHHHHHcCCCh-hHCCCHHHHhcC
Confidence 000 000 0011223457899999999999 999999999873
No 75
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.2e-40 Score=364.71 Aligned_cols=254 Identities=18% Similarity=0.299 Sum_probs=205.5
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
...++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..|+
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34578999999999999999999875 68999999997542 3455778999999999999999999999999999999
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC---cEEEeeccCcccc
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM---VAHISDFGIAKLL 767 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~---~~kL~DFg~a~~~ 767 (897)
||||+++++|.+++.... .+++.++..++.||+.||+|| |++||+||||||+||+++.++ .+||+|||++...
T Consensus 106 v~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 999999999999887654 589999999999999999999 889999999999999998654 5999999999876
Q ss_pred CCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhh
Q 045539 768 SGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDT 847 (897)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 847 (897)
..... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ..... +...
T Consensus 182 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~~-----------i~~~ 245 (362)
T 2bdw_A 182 NDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQ-----------IKAG 245 (362)
T ss_dssp TTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH-----------HHHT
T ss_pred cCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHH-----------HHhC
Confidence 53322 23457999999999999889999999999999999999999999752111 11111 1110
Q ss_pred hhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 848 NLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 848 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
... .+. +....+..++.+++.+||+.|| ++|||++|+++.
T Consensus 246 ~~~-~~~---~~~~~~~~~~~~li~~~L~~dP-~~R~t~~e~l~h 285 (362)
T 2bdw_A 246 AYD-YPS---PEWDTVTPEAKSLIDSMLTVNP-KKRITADQALKV 285 (362)
T ss_dssp CCC-CCT---TGGGGSCHHHHHHHHHHSCSSG-GGSCCHHHHTTS
T ss_pred CCC-CCc---ccccCCCHHHHHHHHHHcCCCh-hhCcCHHHHhcC
Confidence 000 000 0011223457899999999999 999999999864
No 76
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.5e-40 Score=369.29 Aligned_cols=269 Identities=22% Similarity=0.324 Sum_probs=215.0
Q ss_pred cccCCHHHHHHHhcCCCcCCeeecccceEEEEEEe------cCCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCcc
Q 045539 604 IRRFSYHELLRATDRFSENNLIGIGSFGSIYVARL------QDGMEVAVKVFHQQY-ERALKSFEDECEVMKRI-RHRNL 675 (897)
Q Consensus 604 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~ni 675 (897)
...+...++....++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||
T Consensus 9 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 88 (359)
T 3vhe_A 9 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 88 (359)
T ss_dssp GSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred hCCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcce
Confidence 34456666777789999999999999999999973 246889999997643 34457889999999999 79999
Q ss_pred ceEeeeecCCC-ceEEEEEeccCCChhHhhhcCCC---------------------------------------------
Q 045539 676 VKIISSCSNDD-FKALIMKYMPNGSLENCLYSGTC--------------------------------------------- 709 (897)
Q Consensus 676 v~l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------- 709 (897)
+++++++.+.+ ..++||||+++|+|.+++.....
T Consensus 89 v~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 89 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp CCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 99999987754 48999999999999999876532
Q ss_pred --------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 710 --------------------MLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 710 --------------------~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
.+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 245 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence 188999999999999999999 889999999999999999999999999999987655
Q ss_pred CCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 770 EDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
...........||+.|+|||++.+..++.++|||||||++|||++ |+.||......+ . ....+...
T Consensus 246 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~------------~~~~~~~~ 312 (359)
T 3vhe_A 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-E------------FCRRLKEG 312 (359)
T ss_dssp CTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-H------------HHHHHHHT
T ss_pred cccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-H------------HHHHHHcC
Confidence 444444555678999999999988899999999999999999998 999997632211 1 11111111
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.....+ .....++.+++.+||+.|| ++|||++||++.|++
T Consensus 313 ~~~~~~------~~~~~~l~~li~~~l~~dP-~~Rps~~ell~~L~~ 352 (359)
T 3vhe_A 313 TRMRAP------DYTTPEMYQTMLDCWHGEP-SQRPTFSELVEHLGN 352 (359)
T ss_dssp CCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred CCCCCC------CCCCHHHHHHHHHHccCCh-hhCCCHHHHHHHHHH
Confidence 100000 0122457889999999999 999999999998863
No 77
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.5e-40 Score=358.33 Aligned_cols=252 Identities=19% Similarity=0.253 Sum_probs=205.0
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH------HHHHHHHHHHHHHHhcCCCccceEeeeecCCCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE------RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 688 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 467999999999999999999876 689999999875432 1357789999999999999999999999999999
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC----cEEEeeccCc
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM----VAHISDFGIA 764 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~----~~kL~DFg~a 764 (897)
++||||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYL---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHH---HHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 99999999999999987654 589999999999999999999 889999999999999999887 8999999999
Q ss_pred cccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHH
Q 045539 765 KLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEV 844 (897)
Q Consensus 765 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (897)
........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ... ..+
T Consensus 166 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~-----------~~~ 229 (326)
T 2y0a_A 166 HKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETL-----------ANV 229 (326)
T ss_dssp EECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHH-----------HHH
T ss_pred eECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHH-----------HHH
Confidence 87653322 23456999999999999889999999999999999999999999652111 000 000
Q ss_pred hhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 845 IDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 845 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
..... ..+ ..........+.+++.+|++.|| ++|||++|+++.
T Consensus 230 ~~~~~-~~~---~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~e~l~h 272 (326)
T 2y0a_A 230 SAVNY-EFE---DEYFSNTSALAKDFIRRLLVKDP-KKRMTIQDSLQH 272 (326)
T ss_dssp HHTCC-CCC---HHHHTTSCHHHHHHHHHHSCSSG-GGSCCHHHHHHS
T ss_pred HhcCC-CcC---ccccccCCHHHHHHHHHHccCCh-hhCCCHHHHhcC
Confidence 00000 000 01112233457899999999999 999999999873
No 78
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=8.7e-40 Score=357.71 Aligned_cols=249 Identities=21% Similarity=0.259 Sum_probs=204.2
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++++.. ....+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 468999999999999999999876 68999999997653 23456788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++|+|.+++.... .+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999887654 589999999999999999999 78999999999999999999999999999998643222
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ... ..+......
T Consensus 160 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~-----------~~i~~~~~~- 223 (337)
T 1o6l_A 160 A--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLF-----------ELILMEEIR- 223 (337)
T ss_dssp C--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH-----------HHHHHCCCC-
T ss_pred C--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--HHH-----------HHHHcCCCC-
Confidence 1 223457999999999999999999999999999999999999999752111 000 011111110
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCC-----CHHHHHhh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGA-----DMGWIFSA 892 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RP-----t~~evl~~ 892 (897)
.+. ....++.+++.+|++.|| ++|| +++|+++.
T Consensus 224 ~p~-------~~s~~~~~li~~lL~~dP-~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 224 FPR-------TLSPEAKSLLAGLLKKDP-KQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp CCT-------TSCHHHHHHHHHHTCSST-TTSTTCSTTTHHHHHTS
T ss_pred CCC-------CCCHHHHHHHHHHhhcCH-HHhcCCCCCCHHHHHcC
Confidence 010 123457889999999999 9999 89998763
No 79
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1e-40 Score=373.83 Aligned_cols=259 Identities=22% Similarity=0.283 Sum_probs=206.5
Q ss_pred HHHHHHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCccceEeeeecCC
Q 045539 610 HELLRATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE---RALKSFEDECEVMKRIRHRNLVKIISSCSND 685 (897)
Q Consensus 610 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 685 (897)
.++....++|++.+.||+|+||.||+|+.. +++.||+|++++... ...+.+.+|+.+++.++||||+++++++.++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344455789999999999999999999876 588999999976432 1234578899999999999999999999999
Q ss_pred CceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcc
Q 045539 686 DFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAK 765 (897)
Q Consensus 686 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~ 765 (897)
+..|+||||++||+|.+++.... +++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+|+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~~--~~e~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 99999999999999999997654 89999999999999999999 88999999999999999999999999999998
Q ss_pred ccCCCCceeeeeccccCcccCCcCccCCCC----CCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchH
Q 045539 766 LLSGEDQLSIQIQTLATIGYMAPEYGTKGR----VCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSV 841 (897)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 841 (897)
...... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....
T Consensus 217 ~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~----------------- 278 (410)
T 3v8s_A 217 KMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL----------------- 278 (410)
T ss_dssp ECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-----------------
T ss_pred eeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-----------------
Confidence 765433 22334567999999999876554 78999999999999999999999975211
Q ss_pred HHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCC--CCCHHHHHhh
Q 045539 842 MEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGN--GADMGWIFSA 892 (897)
Q Consensus 842 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~--RPt~~evl~~ 892 (897)
.+.....+.......++.......++.+++.+|++.+| ++ ||+++||++.
T Consensus 279 ~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~-~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 279 VGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDRE-VRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGG-GCTTSSCHHHHHTS
T ss_pred hhHHHHHHhccccccCCCcccccHHHHHHHHHHccChh-hhCCCCCHHHHhcC
Confidence 11111111100000000001223457899999999888 88 9999999863
No 80
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.3e-40 Score=356.48 Aligned_cols=256 Identities=25% Similarity=0.408 Sum_probs=199.2
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQ--YERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
.++|.+.+.||+|+||.||+|++. ..+|+|+++.. .....+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEe
Confidence 468999999999999999999865 46899987643 24456788999999999999999999998764 45789999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
|+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.........
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 9999999999987777799999999999999999999 7889999999999999999999999999999865433333
Q ss_pred eeeeccccCcccCCcCccC---CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhh-cCCchHHHHhhhhh
Q 045539 774 SIQIQTLATIGYMAPEYGT---KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIND-LLPVSVMEVIDTNL 849 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l 849 (897)
.......||+.|+|||++. +..++.++|||||||++|||++|+.||......+. ....+.. ..... +
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~~~~~~~~--------~ 259 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYASPD--------L 259 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTCCCCC--------S
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHHhcCCCCcc--------h
Confidence 3334557999999999875 66788999999999999999999999975321110 1111100 00000 0
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
.... ..+..++.+++.+||+.|| ++|||+.||++.|+
T Consensus 260 ~~~~-------~~~~~~l~~li~~~l~~~p-~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 260 SKLY-------KNCPKAMKRLVADCVKKVK-EERPLFPQILSSIE 296 (307)
T ss_dssp TTSC-------SSSCHHHHHHHHHHSCSSS-TTSCCHHHHHHHHH
T ss_pred hhhh-------cCCcHHHHHHHHHHhhCCh-hhCcCHHHHHHHHH
Confidence 0000 1223457899999999999 99999999999875
No 81
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.4e-41 Score=378.31 Aligned_cols=262 Identities=18% Similarity=0.229 Sum_probs=207.9
Q ss_pred HHHHHHHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHH---HHHHHHHHHHHHHhcCCCccceEeeeecC
Q 045539 609 YHELLRATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYER---ALKSFEDECEVMKRIRHRNLVKIISSCSN 684 (897)
Q Consensus 609 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 684 (897)
+.++....++|++.++||+|+||+||+|+.. +++.||+|++++.... ..+.+.+|+.++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4445555789999999999999999999876 4889999999764322 22347899999999999999999999999
Q ss_pred CCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCc
Q 045539 685 DDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIA 764 (897)
Q Consensus 685 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a 764 (897)
++..|+||||+++|+|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV---HQLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH---HhCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 9999999999999999999987666799999999999999999999 8899999999999999999999999999999
Q ss_pred cccCCCCceeeeeccccCcccCCcCccC-----CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCc
Q 045539 765 KLLSGEDQLSIQIQTLATIGYMAPEYGT-----KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPV 839 (897)
Q Consensus 765 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 839 (897)
+....... .......||+.|+|||++. .+.++.++|||||||++|||++|+.||...... +.
T Consensus 223 ~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-----~~------- 289 (437)
T 4aw2_A 223 LKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ET------- 289 (437)
T ss_dssp EECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HH-------
T ss_pred hhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-----HH-------
Confidence 87654332 2333467999999999876 567899999999999999999999999752111 00
Q ss_pred hHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCC--CCCHHHHHh
Q 045539 840 SVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGN--GADMGWIFS 891 (897)
Q Consensus 840 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~--RPt~~evl~ 891 (897)
...++........+. .......++.+++.+|+..+| ++ ||+++|+++
T Consensus 290 -~~~i~~~~~~~~~p~---~~~~~s~~~~dLi~~lL~~~~-~r~~r~~~~eil~ 338 (437)
T 4aw2_A 290 -YGKIMNHKERFQFPT---QVTDVSENAKDLIRRLICSRE-HRLGQNGIEDFKK 338 (437)
T ss_dssp -HHHHHTHHHHCCCCS---SCCCSCHHHHHHHHTTSSCGG-GCTTTTTTHHHHT
T ss_pred -HHhhhhccccccCCc---ccccCCHHHHHHHHHHhcccc-cccCCCCHHHHhC
Confidence 111111100000000 001123457889999998888 77 999999876
No 82
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.5e-39 Score=369.96 Aligned_cols=346 Identities=28% Similarity=0.419 Sum_probs=225.1
Q ss_pred CCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccc
Q 045539 99 LSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLA 178 (897)
Q Consensus 99 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ 178 (897)
+++|+.|++++|.++ .+|. +..+++|++|+|++|++.+..+ +.++++|++|++++|++++..| ++++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 445555555555555 3442 5555556666666665555443 5555566666666666553322 55666666666
Q ss_pred cccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccccc
Q 045539 179 FATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFS 258 (897)
Q Consensus 179 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (897)
+++|+++++.+ +.++++|++|++++|++++ ++. ...+++|++|+++ |.+.+.. .+.++++|+.|++++|.++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISD-ISA--LSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CGG--GTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCC-Chh--hccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC
Confidence 66666655543 5666666666666666652 332 2355666666664 3343322 2667777777777777665
Q ss_pred cccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCc
Q 045539 259 GFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNL 338 (897)
Q Consensus 259 ~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l 338 (897)
+.. .+..+++|++|++++|++.+..| ++.+
T Consensus 191 ~~~-----------------------~l~~l~~L~~L~l~~n~l~~~~~---------------------------~~~l 220 (466)
T 1o6v_A 191 DIS-----------------------VLAKLTNLESLIATNNQISDITP---------------------------LGIL 220 (466)
T ss_dssp CCG-----------------------GGGGCTTCSEEECCSSCCCCCGG---------------------------GGGC
T ss_pred CCh-----------------------hhccCCCCCEEEecCCccccccc---------------------------cccc
Confidence 431 14566777777777777664321 3456
Q ss_pred cCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceecc
Q 045539 339 GNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYL 418 (897)
Q Consensus 339 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 418 (897)
++|++|++++|++++. ..+..+++|+.|++++|++++..+ +..+++|++|++++|++++..+ +..+++|+.|++
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEc
Confidence 6777777777777763 356677777777777777776544 6777778888888887775433 777788888888
Q ss_pred ccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCC
Q 045539 419 GLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSL 498 (897)
Q Consensus 419 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 498 (897)
++|++++..| +..+++|+ .|++++|++++..| ++.+++|+.|++++|++++. ..+.++++|
T Consensus 295 ~~n~l~~~~~--~~~l~~L~-------------~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L 355 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLT-------------YLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNI 355 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCS-------------EEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred CCCcccCchh--hcCCCCCC-------------EEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCC
Confidence 8888876443 56666666 44445555555544 67788888888888888864 468888888
Q ss_pred cEEeccCCccCCCCchhhhhhcccceEeccCCccccc
Q 045539 499 EVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGE 535 (897)
Q Consensus 499 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 535 (897)
+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 356 ~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 356 NWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp CEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred CEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 888888888887766 78888888888888888874
No 83
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-40 Score=367.25 Aligned_cols=255 Identities=26% Similarity=0.410 Sum_probs=209.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec--------CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCccceEeeeecCC
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ--------DGMEVAVKVFHQQY-ERALKSFEDECEVMKRI-RHRNLVKIISSCSND 685 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 685 (897)
.++|.+.+.||+|+||.||+|++. .++.||+|+++... ....+.+.+|+++++++ +||||+++++++.++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 468999999999999999999852 24579999997653 34557889999999999 899999999999999
Q ss_pred CceEEEEEeccCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee
Q 045539 686 DFKALIMKYMPNGSLENCLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL 750 (897)
Q Consensus 686 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll 750 (897)
+..++||||+++|+|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCcceEEE
Confidence 99999999999999999997654 3589999999999999999999 78999999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccch
Q 045539 751 DEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSL 829 (897)
Q Consensus 751 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~ 829 (897)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--~- 301 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--E- 301 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H-
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--H-
Confidence 9999999999999987654443333444567889999999999999999999999999999999 99998753111 1
Q ss_pred hHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 830 NRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 830 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
..+.+......... ..+..++.+++.+||+.|| ++|||++||++.|+
T Consensus 302 -----------~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dP-~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 302 -----------LFKLLKEGHRMDKP------SNCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLD 348 (382)
T ss_dssp -----------HHHHHHTTCCCCCC------SSCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred -----------HHHHHHcCCCCCCC------ccCCHHHHHHHHHHcCCCh-hhCcCHHHHHHHHH
Confidence 11111111111110 1223457899999999999 99999999999885
No 84
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.2e-39 Score=352.45 Aligned_cols=263 Identities=25% Similarity=0.335 Sum_probs=200.0
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHh--cCCCccceEeeeecC----CCceE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKR--IRHRNLVKIISSCSN----DDFKA 689 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~ 689 (897)
.++|++.+.||+|+||+||+|++ +|+.||||++.... .+.+.+|.+++.. ++||||+++++++.+ ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 57899999999999999999988 58999999987653 2445566677666 789999999998643 35689
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCcEeCCCCCCCeeeCCCCcEEEeeccCc
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHF-----GHSTPIIHCDLKPSNVLLDEDMVAHISDFGIA 764 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~-----~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a 764 (897)
+||||+++|+|.+++... .+++..+..++.|++.||+|||. .+++||+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 48999999999999999999941 11899999999999999999999999999999
Q ss_pred cccCCCCceee--eeccccCcccCCcCccCCC------CCCccchHHHHHHHHHHHHcC----------CCCCcccccCc
Q 045539 765 KLLSGEDQLSI--QIQTLATIGYMAPEYGTKG------RVCTRGDVYSYGIMLMEMFTK----------KKPTDEIFIGE 826 (897)
Q Consensus 765 ~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~sDv~slGvil~elltg----------~~p~~~~~~~~ 826 (897)
+.......... .....||+.|+|||++.+. .+++++|||||||++|||++| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 87654333211 2234799999999988776 456799999999999999999 77776543322
Q ss_pred cchhHHhhhcCCchHHHHhhh-hhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 827 LSLNRWINDLLPVSVMEVIDT-NLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~i~~-~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
........ .+.. ......+.. ........++.+++.+||+.|| ++|||++||++.|++
T Consensus 241 ~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP-~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 241 PSFEDMRK---------VVCVDQQRPNIPNR-WFSDPTLTSLAKLMKECWYQNP-SARLTALRIKKTLTK 299 (301)
T ss_dssp CCHHHHHH---------HHTTSCCCCCCCGG-GGGSHHHHHHHHHHHHHCCSSG-GGSCCHHHHHHHHHH
T ss_pred cchhhhhH---------HHhccCCCCCCChh-hccCccHHHHHHHHHHHhhcCh-hhCCCHHHHHHHHhc
Confidence 22211111 1100 000000000 0012345678999999999999 999999999999864
No 85
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4e-40 Score=363.37 Aligned_cols=258 Identities=27% Similarity=0.392 Sum_probs=209.0
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec------CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCC
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ------DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDD 686 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 686 (897)
...++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+++
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34679999999999999999999875 34889999997653 344678999999999999999999999999999
Q ss_pred ceEEEEEeccCCChhHhhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCC
Q 045539 687 FKALIMKYMPNGSLENCLYSGT-----------------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDL 743 (897)
Q Consensus 687 ~~~lv~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dl 743 (897)
..++||||+++++|.+++.... ..+++.+++.++.|+++||+|| |++||+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCC
Confidence 9999999999999999987642 4689999999999999999999 8899999999
Q ss_pred CCCCeeeCCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCccc
Q 045539 744 KPSNVLLDEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEI 822 (897)
Q Consensus 744 kp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~ 822 (897)
||+||+++.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999987654333333344568999999999888889999999999999999999 99999753
Q ss_pred ccCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 823 FIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
... .... .+.+......+ ..+..++.+++.+||+.|| ++|||++||++.|++
T Consensus 281 ~~~--~~~~-----------~~~~~~~~~~~-------~~~~~~l~~li~~~l~~~p-~~Rps~~~~~~~L~~ 332 (343)
T 1luf_A 281 AHE--EVIY-----------YVRDGNILACP-------ENCPLELYNLMRLCWSKLP-ADRPSFCSIHRILQR 332 (343)
T ss_dssp CHH--HHHH-----------HHHTTCCCCCC-------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred ChH--HHHH-----------HHhCCCcCCCC-------CCCCHHHHHHHHHHcccCc-ccCCCHHHHHHHHHH
Confidence 111 1111 11111111111 1223457899999999999 999999999998864
No 86
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6.3e-40 Score=359.49 Aligned_cols=257 Identities=18% Similarity=0.198 Sum_probs=206.4
Q ss_pred hcCCCcCCeeecccceEEEEEEe-cCCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-QDGMEVAVKVFHQQYERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 693 (897)
.++|++.+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++.+++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46899999999999999999986 4689999999875432 24678999999999 89999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc-----EEEeeccCccccC
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV-----AHISDFGIAKLLS 768 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~-----~kL~DFg~a~~~~ 768 (897)
|+ +++|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++. +||+|||+++...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYV---HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 9999999987666799999999999999999999 7889999999999999998887 9999999998765
Q ss_pred CCCcee-----eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHH
Q 045539 769 GEDQLS-----IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVME 843 (897)
Q Consensus 769 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (897)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... . ..+
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~------------~~~ 227 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--T------------LKE 227 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--S------------HHH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--c------------HHH
Confidence 433211 123557999999999999999999999999999999999999999763211 1 111
Q ss_pred HhhhhhcchhhhhHHHH-HHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 844 VIDTNLLRGEERFFAAK-EQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 844 ~i~~~l~~~~~~~~~~~-~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
.+............... ...+ ++.+++..||+.|| .+||++++|.+.|+
T Consensus 228 ~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p-~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 228 RYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDF-FEKPDYDYLRKLFT 277 (330)
T ss_dssp HHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCT-TCCCCHHHHHHHHH
T ss_pred HHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCC-CCCCCHHHHHHHHH
Confidence 11111100000000000 1122 68999999999999 99999999999875
No 87
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.1e-40 Score=353.67 Aligned_cols=254 Identities=22% Similarity=0.385 Sum_probs=205.7
Q ss_pred HhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
..++|++.+.||+|+||.||+|++.+++.||+|+++.... ..+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 3578999999999999999999999888999999985532 236788999999999999999999999999999999999
Q ss_pred ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCcee
Q 045539 695 MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 774 (897)
Q Consensus 695 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~ 774 (897)
+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+........ .
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-T 176 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-H
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCccceEEEcCCCCEEEcccccccccccccc-c
Confidence 999999999987666799999999999999999999 889999999999999999999999999999987643221 1
Q ss_pred eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchh
Q 045539 775 IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGE 853 (897)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 853 (897)
......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... ...+.+........
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------------~~~~~~~~~~~~~~ 242 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------------ETAEHIAQGLRLYR 242 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------------HHHHHHHTTCCCCC
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--------------HHHHHHhcccCCCC
Confidence 1223456788999999988889999999999999999998 99999763211 01111111111111
Q ss_pred hhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 854 ERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 854 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
+ ......+.+++.+||+.|| ++|||++|+++.|+
T Consensus 243 ~------~~~~~~l~~li~~~l~~~p-~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 243 P------HLASEKVYTIMYSCWHEKA-DERPTFKILLSNIL 276 (283)
T ss_dssp C------TTCCHHHHHHHHHTTCSSG-GGSCCHHHHHHHHH
T ss_pred C------CcCCHHHHHHHHHHccCCh-hHCcCHHHHHHHHH
Confidence 1 0112457899999999999 99999999999885
No 88
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4e-40 Score=360.38 Aligned_cols=254 Identities=24% Similarity=0.375 Sum_probs=199.8
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCce----EEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGME----VAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKA 689 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 689 (897)
.++|++.+.||+|+||+||+|++. +++. ||+|.++... ....+.+.+|+.++++++||||+++++++.++. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 467999999999999999999864 3443 5888775433 344578899999999999999999999998765 78
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
+|+||+++|+|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 99999999999999988777799999999999999999999 788999999999999999999999999999988765
Q ss_pred CCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 770 EDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... . ....+...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~------------~~~~~~~~ 235 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--E------------ISSILEKG 235 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--G------------HHHHHHTT
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--H------------HHHHHHcC
Confidence 544444445567889999999999999999999999999999999 99999763211 1 12222211
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
...... ..+..++.+++.+||+.|| ++|||++|+++.|+
T Consensus 236 ~~~~~~------~~~~~~~~~li~~~l~~~p-~~Rps~~ell~~l~ 274 (327)
T 3poz_A 236 ERLPQP------PICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFS 274 (327)
T ss_dssp CCCCCC------TTBCHHHHHHHHHHTCSCG-GGSCCHHHHHHHHH
T ss_pred CCCCCC------ccCCHHHHHHHHHHcCCCh-hhCCCHHHHHHHHH
Confidence 111110 1123457889999999999 99999999998874
No 89
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=364.21 Aligned_cols=247 Identities=19% Similarity=0.305 Sum_probs=198.1
Q ss_pred cCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEeccCCC
Q 045539 621 ENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKYMPNGS 699 (897)
Q Consensus 621 ~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 699 (897)
..+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+++..++||||+++++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 3578999999999999865 689999999987655566789999999999999999999999999999999999999999
Q ss_pred hhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee--CCCCcEEEeeccCccccCCCCceeeee
Q 045539 700 LENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL--DEDMVAHISDFGIAKLLSGEDQLSIQI 777 (897)
Q Consensus 700 L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll--~~~~~~kL~DFg~a~~~~~~~~~~~~~ 777 (897)
|.+++......+++.++..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||+++....... ..
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~ 246 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHM---HQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LK 246 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---cc
Confidence 9999887766799999999999999999999 88999999999999999 6778999999999987654332 22
Q ss_pred ccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhhhH
Q 045539 778 QTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFF 857 (897)
Q Consensus 778 ~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~ 857 (897)
...||+.|+|||++....++.++|||||||++|||++|+.||...... ..+ ..++.........
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~------------~~i~~~~~~~~~~--- 310 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETL------------NNILACRWDLEDE--- 310 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHH------------HHHHHTCCCSCSG---
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHH------------HHHHhccCCCChh---
Confidence 346999999999998889999999999999999999999999753111 011 1111111100000
Q ss_pred HHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 858 AAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 858 ~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.......++.+++.+|++.|| ++|||++|+++
T Consensus 311 -~~~~~~~~~~~li~~~L~~dp-~~Rps~~e~l~ 342 (373)
T 2x4f_A 311 -EFQDISEEAKEFISKLLIKEK-SWRISASEALK 342 (373)
T ss_dssp -GGTTSCHHHHHHHHTTSCSSG-GGSCCHHHHHH
T ss_pred -hhccCCHHHHHHHHHHcCCCh-hhCCCHHHHhc
Confidence 001223457899999999999 99999999986
No 90
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.4e-40 Score=355.82 Aligned_cols=257 Identities=24% Similarity=0.367 Sum_probs=211.2
Q ss_pred hcCCCcCCeeecccceEEEEEEe------cCCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCc
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL------QDGMEVAVKVFHQQY-ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDF 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 687 (897)
.++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+++++++ +||||+++++++.+++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 56899999999999999999975 246889999997553 34457889999999999 89999999999999999
Q ss_pred eEEEEEeccCCChhHhhhcCCC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee
Q 045539 688 KALIMKYMPNGSLENCLYSGTC-----------------MLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL 750 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll 750 (897)
.++||||+++|+|.+++..... .+++.++..++.|++.||+|| |++||+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCccceEEE
Confidence 9999999999999999876542 489999999999999999999 78999999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccch
Q 045539 751 DEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSL 829 (897)
Q Consensus 751 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~ 829 (897)
+.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--- 255 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--- 255 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh---
Confidence 9999999999999987765544444445567889999999888899999999999999999999 999987632111
Q ss_pred hHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 830 NRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 830 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.....+......... .....++.+++.+|++.|| ++|||++|+++.|++
T Consensus 256 ----------~~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 256 ----------KFYKMIKEGFRMLSP------EHAPAEMYDIMKTCWDADP-LKRPTFKQIVQLIEK 304 (313)
T ss_dssp ----------HHHHHHHHTCCCCCC------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred ----------HHHHHhccCCCCCCc------ccCCHHHHHHHHHHcCCCc-hhCcCHHHHHHHHHH
Confidence 111122211111110 1123457899999999999 999999999998863
No 91
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.6e-40 Score=355.91 Aligned_cols=256 Identities=23% Similarity=0.351 Sum_probs=209.7
Q ss_pred hcCCCcCCeeecccceEEEEEEe------cCCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL------QDGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 688 (897)
.++|.+.+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|++++++++||||+++++++.+++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 57899999999999999999975 235789999997543 44567889999999999999999999999999999
Q ss_pred EEEEEeccCCChhHhhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCC
Q 045539 689 ALIMKYMPNGSLENCLYSGT-----------------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKP 745 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp 745 (897)
++||||+++++|.+++.... ..+++.++..++.|+++||+|| |++||+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHH---HHTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHH---HHCCCcccccch
Confidence 99999999999999987643 2388999999999999999999 789999999999
Q ss_pred CCeeeCCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCccccc
Q 045539 746 SNVLLDEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFI 824 (897)
Q Consensus 746 ~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~ 824 (897)
+||+++.++.+||+|||++................+|+.|+|||...+..++.++||||||+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987755444333444567889999999888889999999999999999999 9999975321
Q ss_pred CccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 825 GELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
. . ..+.+......... ..+..++.+++.+||+.|| ++|||++|+++.|++
T Consensus 259 ~--~------------~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~dp-~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 259 E--R------------LFNLLKTGHRMERP------DNCSEEMYRLMLQCWKQEP-DKRPVFADISKDLEK 308 (314)
T ss_dssp G--G------------HHHHHHTTCCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred H--H------------HHHHhhcCCcCCCC------ccCCHHHHHHHHHHccCCh-hhCcCHHHHHHHHHH
Confidence 1 1 11111111100000 1223457899999999999 999999999998853
No 92
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.7e-40 Score=360.14 Aligned_cols=249 Identities=21% Similarity=0.275 Sum_probs=198.6
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKA 689 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 689 (897)
..++|++.+.||+|+||.||+|+.. +|+.||+|++++.. ....+.+.+|.++++.+ +||||+++++++.+++..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3578999999999999999999876 58999999998653 33456778999999998 6999999999999999999
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
+||||+++|+|.+++.... .+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+|+....
T Consensus 101 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFL---HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999987654 589999999999999999999 889999999999999999999999999999985432
Q ss_pred CCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhh
Q 045539 770 EDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNL 849 (897)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 849 (897)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+.....
T Consensus 177 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~-----------~~~i~~~~~ 241 (353)
T 3txo_A 177 NG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--DL-----------FEAILNDEV 241 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH-----------HHHHHHCCC
T ss_pred CC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--HH-----------HHHHHcCCC
Confidence 22 2234557999999999998888999999999999999999999999752111 00 011111111
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCH------HHHHh
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADM------GWIFS 891 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~------~evl~ 891 (897)
. .+. .....+.+++.+|++.|| ++||++ +|+++
T Consensus 242 ~-~p~-------~~~~~~~~li~~lL~~dP-~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 V-YPT-------WLHEDATGILKSFMTKNP-TMRLGSLTQGGEHAILR 280 (353)
T ss_dssp C-CCT-------TSCHHHHHHHHHHTCSSG-GGSTTSGGGTCTHHHHT
T ss_pred C-CCC-------CCCHHHHHHHHHHhhhCH-HHccCCcccCCHHHHhh
Confidence 0 010 122447889999999999 999998 66654
No 93
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=367.87 Aligned_cols=255 Identities=22% Similarity=0.356 Sum_probs=205.0
Q ss_pred hcCCCcCCeeecccceEEEEEEec------CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ------DGMEVAVKVFHQQ-YERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 688 (897)
.++|++.+.||+|+||.||+|++. +++.||||+++.. .......+.+|+.++++++||||+++++++.+++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467999999999999999999843 4678999998643 244456788999999999999999999999999999
Q ss_pred EEEEEeccCCChhHhhhcCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC---cEEEe
Q 045539 689 ALIMKYMPNGSLENCLYSGT------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM---VAHIS 759 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~---~~kL~ 759 (897)
++||||+++|+|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999987643 4589999999999999999999 889999999999999999555 59999
Q ss_pred eccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCC
Q 045539 760 DFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLP 838 (897)
Q Consensus 760 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 838 (897)
|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||...... .
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~---------- 294 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--E---------- 294 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H----------
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H----------
Confidence 9999976533222222334568999999999988899999999999999999998 99999763111 1
Q ss_pred chHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 839 VSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 839 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
..+.+......... ..+...+.+++.+||+.|| ++|||++||++.|+
T Consensus 295 --~~~~i~~~~~~~~~------~~~~~~l~~li~~~l~~dP-~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 295 --VLEFVTSGGRMDPP------KNCPGPVYRIMTQCWQHQP-EDRPNFAIILERIE 341 (367)
T ss_dssp --HHHHHHTTCCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred --HHHHHHcCCCCCCC------ccCCHHHHHHHHHHcCCCH-hHCcCHHHHHHHHH
Confidence 11111111111111 1223457899999999999 99999999999875
No 94
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=352.28 Aligned_cols=249 Identities=24% Similarity=0.332 Sum_probs=195.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH--------------------------HHHHHHHHHHHHHH
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE--------------------------RALKSFEDECEVMK 668 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 668 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999999865 689999999864421 12356889999999
Q ss_pred hcCCCccceEeeeecC--CCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCC
Q 045539 669 RIRHRNLVKIISSCSN--DDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPS 746 (897)
Q Consensus 669 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~ 746 (897)
+++||||+++++++.+ ++..|+||||+++++|.+++.. ..+++.++..++.|++.||+|| |++||+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYL---HYQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHH
Confidence 9999999999999976 5688999999999999887554 3589999999999999999999 7889999999999
Q ss_pred CeeeCCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCC---CCccchHHHHHHHHHHHHcCCCCCcccc
Q 045539 747 NVLLDEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGR---VCTRGDVYSYGIMLMEMFTKKKPTDEIF 823 (897)
Q Consensus 747 NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDv~slGvil~elltg~~p~~~~~ 823 (897)
||+++.++.+||+|||++........ ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999999987654332 233457999999999987654 4788999999999999999999997521
Q ss_pred cCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 824 IGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.. .... .+....... +. ......++.+++.+||+.|| ++|||++|+++
T Consensus 245 ~~--~~~~-----------~~~~~~~~~-~~-----~~~~~~~l~~li~~~l~~dp-~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 IM--CLHS-----------KIKSQALEF-PD-----QPDIAEDLKDLITRMLDKNP-ESRIVVPEIKL 292 (298)
T ss_dssp HH--HHHH-----------HHHHCCCCC-CS-----SSCCCHHHHHHHHHHTCSCT-TTSCCHHHHTT
T ss_pred HH--HHHH-----------HHhcccCCC-CC-----ccccCHHHHHHHHHHhhcCh-hhCCCHHHHhc
Confidence 10 0000 000000000 00 01123457899999999999 99999999875
No 95
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.8e-39 Score=350.50 Aligned_cols=259 Identities=14% Similarity=0.151 Sum_probs=207.9
Q ss_pred hcCCCcCCeeecccceEEEEEEe-cCCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-QDGMEVAVKVFHQQYERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 693 (897)
.++|++.+.||+|+||.||+|+. .+|+.||+|++..... .+.+.+|+++++++ +|++++++++++.++...++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46899999999999999999986 4689999999865432 24678899999999 69999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc-----EEEeeccCccccC
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV-----AHISDFGIAKLLS 768 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~-----~kL~DFg~a~~~~ 768 (897)
|+ +++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++. +||+|||++....
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI---HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 9999999987766799999999999999999999 8999999999999999987776 9999999998765
Q ss_pred CCCce-----eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHH
Q 045539 769 GEDQL-----SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVME 843 (897)
Q Consensus 769 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (897)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ... ...
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~--------~~~ 232 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQK--------YER 232 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHH--------HHH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHH--------HHH
Confidence 43321 122345699999999999999999999999999999999999999976321110 000 011
Q ss_pred HhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 844 VIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 844 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
+.......... .....+..++.+++.+||+.|| ++|||+++|++.|+
T Consensus 233 ~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp-~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 233 IGEKKQSTPLR---ELCAGFPEEFYKYMHYARNLAF-DATPDYDYLQGLFS 279 (298)
T ss_dssp HHHHHHHSCHH---HHTTTSCHHHHHHHHHHHHCCT-TCCCCHHHHHHHHH
T ss_pred HHhhccCccHH---HHHhhCcHHHHHHHHHHhcCCc-ccCCCHHHHHHHHH
Confidence 11111100000 0111234568899999999999 99999999999875
No 96
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=368.52 Aligned_cols=261 Identities=18% Similarity=0.260 Sum_probs=206.9
Q ss_pred HHHHHHHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecC
Q 045539 609 YHELLRATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSN 684 (897)
Q Consensus 609 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 684 (897)
+.+.....++|++.+.||+|+||.||+|+.. +|+.||+|++++.. ....+.+.+|.+++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 4444555789999999999999999999875 69999999997643 2233557899999999999999999999999
Q ss_pred CCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCc
Q 045539 685 DDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIA 764 (897)
Q Consensus 685 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a 764 (897)
++..|+||||+++|+|.+++...+..+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV---HRLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 9999999999999999999987655699999999999999999999 8899999999999999999999999999999
Q ss_pred cccCCCCceeeeeccccCcccCCcCccC-------CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcC
Q 045539 765 KLLSGEDQLSIQIQTLATIGYMAPEYGT-------KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLL 837 (897)
Q Consensus 765 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 837 (897)
+....... .......||+.|+|||++. ...++.++|||||||++|||++|+.||...... +.
T Consensus 210 ~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~----- 278 (412)
T 2vd5_A 210 LKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-----ET----- 278 (412)
T ss_dssp EECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HH-----
T ss_pred eeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-----HH-----
Confidence 87654332 2223457999999999876 457899999999999999999999999752111 00
Q ss_pred CchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCC---CCHHHHHh
Q 045539 838 PVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNG---ADMGWIFS 891 (897)
Q Consensus 838 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~R---Pt~~evl~ 891 (897)
...++........ .........++.+++.+|+. +| ++| |+++|+++
T Consensus 279 ---~~~i~~~~~~~~~---p~~~~~~s~~~~dli~~lL~-~p-~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 279 ---YGKIVHYKEHLSL---PLVDEGVPEEARDFIQRLLC-PP-ETRLGRGGAGDFRT 327 (412)
T ss_dssp ---HHHHHTHHHHCCC---C----CCCHHHHHHHHTTSS-CG-GGCTTTTTHHHHHT
T ss_pred ---HHHHHhcccCcCC---CccccCCCHHHHHHHHHHcC-Ch-hhcCCCCCHHHHhc
Confidence 0111110000000 00011234567899999998 99 887 68999875
No 97
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-40 Score=360.37 Aligned_cols=257 Identities=24% Similarity=0.372 Sum_probs=208.0
Q ss_pred HhcCCCcCCeeecccceEEEEEEe------cCCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCC
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARL------QDGMEVAVKVFHQQY-ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDD 686 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 686 (897)
..++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+++++++ +||||+++++++.+++
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 457899999999999999999986 246689999997543 33457889999999999 8999999999999999
Q ss_pred ceEEEEEeccCCChhHhhhcCCC----------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCC
Q 045539 687 FKALIMKYMPNGSLENCLYSGTC----------------------MLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLK 744 (897)
Q Consensus 687 ~~~lv~e~~~~gsL~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlk 744 (897)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|| |++||+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL---EFKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHH---HHTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCC
Confidence 99999999999999999976542 378999999999999999999 88999999999
Q ss_pred CCCeeeCCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccc
Q 045539 745 PSNVLLDEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIF 823 (897)
Q Consensus 745 p~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~ 823 (897)
|+||+++.++.+||+|||++................||+.|+|||++.+..++.++||||||+++|||+| |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987655444444445567899999999888899999999999999999998 999997632
Q ss_pred cCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 824 IGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
.. .. ....+........+ .....++.+++.+||+.|| ++|||++|+++.|+
T Consensus 280 ~~-~~------------~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 280 VD-AN------------FYKLIQNGFKMDQP------FYATEEIYIIMQSCWAFDS-RKRPSFPNLTSFLG 330 (344)
T ss_dssp CS-HH------------HHHHHHTTCCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred cH-HH------------HHHHHhcCCCCCCC------CCCCHHHHHHHHHHcCCCc-hhCcCHHHHHHHHH
Confidence 11 11 11112111111110 0123457889999999999 99999999999875
No 98
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.7e-39 Score=354.92 Aligned_cols=252 Identities=21% Similarity=0.286 Sum_probs=199.4
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCC------
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDD------ 686 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 686 (897)
..++|++.+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4578999999999999999999886 79999999987433 334578899999999999999999999885433
Q ss_pred ---------------------------------------------------ceEEEEEeccCCChhHhhhcCC--CCCCH
Q 045539 687 ---------------------------------------------------FKALIMKYMPNGSLENCLYSGT--CMLDI 713 (897)
Q Consensus 687 ---------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~--~~~~~ 713 (897)
..++||||+++++|.+++.... ...++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 3799999999999999998755 34566
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce----------eeeeccccCc
Q 045539 714 FQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL----------SIQIQTLATI 783 (897)
Q Consensus 714 ~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~----------~~~~~~~gt~ 783 (897)
..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++........ .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHH---HhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 77899999999999999 8899999999999999999999999999999877543221 1223456999
Q ss_pred ccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHH
Q 045539 784 GYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQI 863 (897)
Q Consensus 784 ~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 863 (897)
.|+|||++.+..++.++|||||||++|||++|..|+.... +..........+ ......
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-------------------~~~~~~~~~~~~---~~~~~~ 298 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-------------------RIITDVRNLKFP---LLFTQK 298 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-------------------HHHHHHHTTCCC---HHHHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-------------------HHHHHhhccCCC---cccccC
Confidence 9999999988899999999999999999999987754310 111111111111 112233
Q ss_pred HHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 864 LLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 864 ~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
..++.+++.+||+.|| ++|||++|+++.
T Consensus 299 ~~~~~~li~~~l~~~p-~~Rps~~~~l~~ 326 (332)
T 3qd2_B 299 YPQEHMMVQDMLSPSP-TERPEATDIIEN 326 (332)
T ss_dssp CHHHHHHHHHHHCSSG-GGSCCHHHHHHS
T ss_pred ChhHHHHHHHHccCCC-CcCCCHHHHhhc
Confidence 4456889999999999 999999999873
No 99
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1e-39 Score=350.49 Aligned_cols=268 Identities=20% Similarity=0.259 Sum_probs=200.2
Q ss_pred cCCCcCCeeecccceEEEEEEecCCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYE--RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
++|++.+.||+|+||.||+|+..+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57999999999999999999988899999999864432 2346788999999999999999999999999999999999
Q ss_pred ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCcee
Q 045539 695 MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 774 (897)
Q Consensus 695 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~ 774 (897)
+++ +|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC---HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--R 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--c
Confidence 975 99998887666799999999999999999999 78999999999999999999999999999998764322 1
Q ss_pred eeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhc---CCchHHHH-----h
Q 045539 775 IQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDL---LPVSVMEV-----I 845 (897)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~-----i 845 (897)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ...+..... ........ .
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccccc
Confidence 2234568999999998865 458999999999999999999999997532111 111111100 00000000 0
Q ss_pred hhhhcchhhh-hHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 846 DTNLLRGEER-FFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 846 ~~~l~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
++......+. ..........++.+++.+|++.|| ++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP-NQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSST-TTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCc-ccCCCHHHHhcC
Confidence 0000000000 000001123457899999999999 999999999863
No 100
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.3e-39 Score=344.61 Aligned_cols=251 Identities=20% Similarity=0.233 Sum_probs=205.0
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
..++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3568999999999999999999876 477899999987665566789999999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee---CCCCcEEEeeccCccccCCC
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll---~~~~~~kL~DFg~a~~~~~~ 770 (897)
|+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||.+......
T Consensus 87 ~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 87 LCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYC---HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred ccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 999999999887654 489999999999999999999 88999999999999999 78889999999999876543
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
.. .....||+.|+|||++.+ .++.++||||||+++|||++|+.||...... +.......
T Consensus 163 ~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----------------~~~~~~~~ 221 (277)
T 3f3z_A 163 KM---MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS-----------------EVMLKIRE 221 (277)
T ss_dssp SC---BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----------------HHHHHHHH
T ss_pred cc---hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH-----------------HHHHHHHh
Confidence 32 234568999999998765 4899999999999999999999999763211 11111110
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
...............++.+++.+|++.|| ++|||+.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp-~~R~s~~~~l~ 261 (277)
T 3f3z_A 222 GTFTFPEKDWLNVSPQAESLIRRLLTKSP-KQRITSLQALE 261 (277)
T ss_dssp CCCCCCHHHHTTSCHHHHHHHHHHTCSST-TTSCCHHHHTT
T ss_pred CCCCCCchhhhcCCHHHHHHHHHHccCCh-hhCcCHHHHhc
Confidence 10000011111234568899999999999 99999999986
No 101
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-39 Score=349.84 Aligned_cols=245 Identities=24% Similarity=0.321 Sum_probs=203.6
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE---RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++++... ...+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 468999999999999999999876 689999999986532 2356788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYL---HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 99999999999998754 589999999999999999999 8999999999999999999999999999999875432
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...++.....
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~-----------~~~i~~~~~~- 221 (318)
T 1fot_A 160 ----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--KT-----------YEKILNAELR- 221 (318)
T ss_dssp ----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HH-----------HHHHHHCCCC-
T ss_pred ----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HH-----------HHHHHhCCCC-
Confidence 23457999999999999999999999999999999999999999752111 00 1111111111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCC-----CHHHHHh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGA-----DMGWIFS 891 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RP-----t~~evl~ 891 (897)
.+. ....++.+++.+|++.|| ++|| +++|+++
T Consensus 222 ~p~-------~~~~~~~~li~~lL~~dp-~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 222 FPP-------FFNEDVKDLLSRLITRDL-SQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CCT-------TSCHHHHHHHHHHTCSCT-TTCTTSSTTTTHHHHT
T ss_pred CCC-------CCCHHHHHHHHHHhccCH-HHcCCCcCCCHHHHhc
Confidence 010 122457899999999999 9999 8888874
No 102
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.4e-40 Score=351.83 Aligned_cols=257 Identities=26% Similarity=0.426 Sum_probs=193.2
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
.++|++.+.||+|+||.||+|++. ..||+|+++... ....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEE
Confidence 568999999999999999999865 359999986432 445678999999999999999999999764 456899999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
|+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.........
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 9999999999987777799999999999999999999 8899999999999999999999999999999866533333
Q ss_pred eeeeccccCcccCCcCccC---CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhh-h
Q 045539 774 SIQIQTLATIGYMAPEYGT---KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN-L 849 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-l 849 (897)
.......||+.|+|||++. ...++.++||||||+++|||++|+.||....... . ..+.+... .
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~------------~~~~~~~~~~ 243 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-Q------------IIEMVGRGSL 243 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-H------------HHHHHHHTSC
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-H------------HHHHhccccc
Confidence 3334456899999999876 6678889999999999999999999997632111 1 11111111 0
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
....... ...+..++.+++.+||+.|| ++|||++|++++|++
T Consensus 244 ~~~~~~~---~~~~~~~l~~li~~~l~~~p-~~Rps~~ell~~L~~ 285 (289)
T 3og7_A 244 SPDLSKV---RSNCPKRMKRLMAECLKKKR-DERPSFPRILAEIEE 285 (289)
T ss_dssp CCCTTSS---CTTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred Ccchhhc---cccCCHHHHHHHHHHccCCh-hhCCCHHHHHHHHHH
Confidence 0000000 01223458899999999999 999999999999864
No 103
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=352.30 Aligned_cols=272 Identities=20% Similarity=0.283 Sum_probs=206.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCC--ceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDD--FKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 691 (897)
.++|++.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 468999999999999999999876 58999999997543 334567789999999999999999999987655 77999
Q ss_pred EEeccCCChhHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee----CCCCcEEEeeccCcc
Q 045539 692 MKYMPNGSLENCLYSGT--CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL----DEDMVAHISDFGIAK 765 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll----~~~~~~kL~DFg~a~ 765 (897)
|||+++++|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999997654 2389999999999999999999 88999999999999999 788899999999998
Q ss_pred ccCCCCceeeeeccccCcccCCcCccC--------CCCCCccchHHHHHHHHHHHHcCCCCCcccccCcc---chhHHhh
Q 045539 766 LLSGEDQLSIQIQTLATIGYMAPEYGT--------KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGEL---SLNRWIN 834 (897)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~---~~~~~~~ 834 (897)
....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||........ .......
T Consensus 165 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 165 ELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp ECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 7654332 23456999999999865 57889999999999999999999999975322111 1111111
Q ss_pred hcCCchH---HHHhhhhh--cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 835 DLLPVSV---MEVIDTNL--LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 835 ~~~~~~~---~~~i~~~l--~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
...+... ........ ....+......+.....+.+++.+|++.|| ++|||++|+++...
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP-~~R~s~~ell~h~~ 305 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQ-EKCWGFDQFFAETS 305 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCT-TTSCCHHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCCh-hhhccHHHhhhccH
Confidence 1000000 00000000 000000001113445668899999999999 99999999998753
No 104
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.3e-40 Score=357.90 Aligned_cols=246 Identities=22% Similarity=0.342 Sum_probs=200.6
Q ss_pred hcCCCcCCeeecccceEEEEEEe-cCCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-QDGMEVAVKVFHQQYE---RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|.+.+.||+|+||.||+|++ .+|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999987 4689999999976532 2245788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+ +|+|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||++++++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYC---HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 788888876654 589999999999999999999 78899999999999999999999999999998765432
Q ss_pred ceeeeeccccCcccCCcCccCCCCC-CccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRV-CTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
. .....||+.|+|||++.+..+ ++++||||+||++|+|++|+.||........ .+.+ .....
T Consensus 163 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--~~~i------------~~~~~ 225 (336)
T 3h4j_B 163 F---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--FKKV------------NSCVY 225 (336)
T ss_dssp T---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--BCCC------------CSSCC
T ss_pred c---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--HHHH------------HcCCC
Confidence 2 234569999999999887776 7899999999999999999999976321110 0000 00000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..+. ....++.+++.+|++.|| ++|||++|+++
T Consensus 226 ~~p~-------~~s~~~~~li~~~L~~dP-~~Rpt~~eil~ 258 (336)
T 3h4j_B 226 VMPD-------FLSPGAQSLIRRMIVADP-MQRITIQEIRR 258 (336)
T ss_dssp CCCT-------TSCHHHHHHHHTTSCSSG-GGSCCHHHHTT
T ss_pred CCcc-------cCCHHHHHHHHHHcCCCh-hHCcCHHHHHh
Confidence 0000 112346789999999999 99999999976
No 105
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.7e-40 Score=357.32 Aligned_cols=254 Identities=21% Similarity=0.332 Sum_probs=194.7
Q ss_pred hcCCCcCCeeecccceEEEEEEe-cCCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCc----
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-QDGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDF---- 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 687 (897)
.++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 56899999999999999999986 468999999997542 3445678999999999999999999999876544
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
.|+||||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++...
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFS---HQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999987654 589999999999999999999 7899999999999999999999999999999876
Q ss_pred CCCCce-eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhh
Q 045539 768 SGEDQL-SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVID 846 (897)
Q Consensus 768 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 846 (897)
...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... +...
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-----------------~~~~ 229 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-----------------SVAY 229 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----------------HHHH
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-----------------HHHH
Confidence 533221 2223456899999999998889999999999999999999999999753211 0111
Q ss_pred hhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 847 TNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 847 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
...................++.+++.+||+.|| ++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP-~~R~~~~~~l~ 273 (311)
T 3ork_A 230 QHVREDPIPPSARHEGLSADLDAVVLKALAKNP-ENRYQTAAEMR 273 (311)
T ss_dssp HHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSG-GGSCSSHHHHH
T ss_pred HHhcCCCCCcccccCCCCHHHHHHHHHHHhcCH-hhChhhHHHHH
Confidence 111110000001111234567899999999999 99997777654
No 106
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=349.56 Aligned_cols=250 Identities=26% Similarity=0.385 Sum_probs=195.5
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEec
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKYM 695 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 695 (897)
.++|++.+.||+|+||.||+|++. ++.||+|++.... ..+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 357889999999999999999886 7899999987543 34678999999999999999999999874 479999999
Q ss_pred cCCChhHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc-EEEeeccCccccCCCCc
Q 045539 696 PNGSLENCLYSGT--CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV-AHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 696 ~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~-~kL~DFg~a~~~~~~~~ 772 (897)
++++|.+++.... ..+++..+..++.|+++||+|||..|.+||+||||||+||+++.++. +||+|||.+......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 9999999998665 34788999999999999999996655599999999999999988876 799999999765422
Q ss_pred eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcch
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRG 852 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 852 (897)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||............... .......
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-----------~~~~~~~ 225 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH-----------NGTRPPL 225 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH-----------TTCCCCC
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh-----------cCCCCCc
Confidence 12345899999999999989999999999999999999999999753221111000000 0000000
Q ss_pred hhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 853 EERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 853 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
. ..+...+.+++.+||+.|| ++|||++|+++.|+
T Consensus 226 ~-------~~~~~~l~~li~~~l~~dp-~~Rps~~ell~~L~ 259 (307)
T 2eva_A 226 I-------KNLPKPIESLMTRCWSKDP-SQRPSMEEIVKIMT 259 (307)
T ss_dssp B-------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred c-------cccCHHHHHHHHHHhcCCh-hhCcCHHHHHHHHH
Confidence 0 1123457889999999999 99999999999875
No 107
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.4e-39 Score=361.63 Aligned_cols=264 Identities=17% Similarity=0.179 Sum_probs=204.8
Q ss_pred hcCCCcCCeeecccceEEEEEEecC------CceEEEEEechhhHHH-----------HHHHHHHHHHHHhcCCCccceE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQD------GMEVAVKVFHQQYERA-----------LKSFEDECEVMKRIRHRNLVKI 678 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l 678 (897)
.++|++.+.||+|+||.||+|++.. ++.||||++....... ...+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 5689999999999999999998754 4789999986543211 1223456667788889999999
Q ss_pred eeeecCC----CceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeC--C
Q 045539 679 ISSCSND----DFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLD--E 752 (897)
Q Consensus 679 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~--~ 752 (897)
++++... ...|+||||+ +++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~l---H~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYI---HEHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeEEecCCHHHEEEecCC
Confidence 9998664 4589999999 9999999988767799999999999999999999 788999999999999998 8
Q ss_pred CCcEEEeeccCccccCCCCcee-----eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCcc
Q 045539 753 DMVAHISDFGIAKLLSGEDQLS-----IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGEL 827 (897)
Q Consensus 753 ~~~~kL~DFg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~ 827 (897)
++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-~ 268 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-P 268 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-H
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-H
Confidence 8999999999998764322111 112345999999999999999999999999999999999999999863222 1
Q ss_pred chhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 828 SLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 828 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
...............+++++.+.. ..+..++.+++..||+.|| ++||++++|++.|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~li~~cl~~~p-~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 269 KYVRDSKIRYRENIASLMDKCFPA---------ANAPGEIAKYMETVKLLDY-TEKPLYENLRDILL 325 (364)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHSCT---------TCCCHHHHHHHHHHHTCCT-TCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHhccc---------ccCHHHHHHHHHHHhcCCC-CCCCCHHHHHHHHH
Confidence 222222222222233444433311 1123568899999999999 99999999999875
No 108
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.2e-38 Score=366.56 Aligned_cols=347 Identities=23% Similarity=0.359 Sum_probs=294.0
Q ss_pred eEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEee
Q 045539 77 RVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLS 156 (897)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 156 (897)
+++.|+++++++.. +| .+..+++|++|||++|.+++..| ++++++|++|++++|++.+..+ +.++++|++|+|+
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 120 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLF 120 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECC
Confidence 57889999999874 55 48899999999999999996544 9999999999999999988776 9999999999999
Q ss_pred ecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccccceeeccccccccc
Q 045539 157 INGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGT 236 (897)
Q Consensus 157 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~ 236 (897)
+|.+++. |. ++++++|++|++++|+++++. .+.++++|++|+++ |.+.+. +. +..+++|++|++++|.+++.
T Consensus 121 ~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~-~~--~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 121 NNQITDI-DP-LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDL-KP--LANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp SSCCCCC-GG-GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCC-GG--GTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCC-hH-HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCc-hh--hccCCCCCEEECcCCcCCCC
Confidence 9999954 43 999999999999999999874 48999999999997 566533 32 45889999999999999764
Q ss_pred ccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHH
Q 045539 237 VPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLS 316 (897)
Q Consensus 237 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~ 316 (897)
..+..+++|++|++++|.+++..| ++.+++|++|++++|+++++
T Consensus 193 --~~l~~l~~L~~L~l~~n~l~~~~~-----------------------~~~l~~L~~L~l~~n~l~~~----------- 236 (466)
T 1o6v_A 193 --SVLAKLTNLESLIATNNQISDITP-----------------------LGILTNLDELSLNGNQLKDI----------- 236 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG-----------------------GGGCTTCCEEECCSSCCCCC-----------
T ss_pred --hhhccCCCCCEEEecCCccccccc-----------------------ccccCCCCEEECCCCCcccc-----------
Confidence 458999999999999999987654 35678999999999998753
Q ss_pred HHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccc
Q 045539 317 LEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQG 396 (897)
Q Consensus 317 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 396 (897)
..+..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|++|++++
T Consensus 237 ----------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~ 296 (466)
T 1o6v_A 237 ----------------GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNE 296 (466)
T ss_dssp ----------------GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCS
T ss_pred ----------------hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCC
Confidence 235678899999999999998665 8899999999999999997554 88899999999999
Q ss_pred cccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCccccc
Q 045539 397 NKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQ 476 (897)
Q Consensus 397 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~ 476 (897)
|++++..| ++.+++|+.|++++|++++..| +..+++|+.|+++ +|++++. ..++.+++|+.
T Consensus 297 n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~-------------~n~l~~~--~~l~~l~~L~~ 357 (466)
T 1o6v_A 297 NQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFY-------------NNKVSDV--SSLANLTNINW 357 (466)
T ss_dssp SCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECC-------------SSCCCCC--GGGTTCTTCCE
T ss_pred CcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECC-------------CCccCCc--hhhccCCCCCE
Confidence 99996544 8899999999999999998666 6778888855554 4555543 46888999999
Q ss_pred ccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchh
Q 045539 477 MFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPAS 515 (897)
Q Consensus 477 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 515 (897)
|++++|++++..| +..+++|+.|++++|++++ +|..
T Consensus 358 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~-~p~~ 393 (466)
T 1o6v_A 358 LSAGHNQISDLTP--LANLTRITQLGLNDQAWTN-APVN 393 (466)
T ss_dssp EECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC-CCBC
T ss_pred EeCCCCccCccch--hhcCCCCCEEeccCCcccC-Cchh
Confidence 9999999998777 8999999999999999996 4543
No 109
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.8e-39 Score=356.26 Aligned_cols=249 Identities=22% Similarity=0.277 Sum_probs=202.0
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCce
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 688 (897)
...++|.+.+.||+|+||.||+|+.. +|+.||+|++++.. ....+.+..|.++++.+ +||||+++++++.+++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34679999999999999999999876 58999999998653 23456678899999987 899999999999999999
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
|+||||+++|+|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFL---HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 99999999999999987644 589999999999999999999 78999999999999999999999999999998643
Q ss_pred CCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 769 GEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+ ....
T Consensus 170 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i-----------~~~~ 234 (345)
T 1xjd_A 170 LGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSI-----------RMDN 234 (345)
T ss_dssp CTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH-----------HHCC
T ss_pred cCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH-----------HhCC
Confidence 2221 234567999999999999999999999999999999999999999752111 111111 0000
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHH-HHH
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMG-WIF 890 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~-evl 890 (897)
. ..+ .....++.+++.+|++.|| ++||++. |+.
T Consensus 235 ~--~~p------~~~s~~~~~li~~lL~~dp-~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 P--FYP------RWLEKEAKDLLVKLFVREP-EKRLGVRGDIR 268 (345)
T ss_dssp C--CCC------TTSCHHHHHHHHHHSCSSG-GGSBTTBSCGG
T ss_pred C--CCC------cccCHHHHHHHHHHhcCCH-hHcCCChHHHH
Confidence 0 000 0122457889999999999 9999997 554
No 110
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=356.52 Aligned_cols=256 Identities=24% Similarity=0.424 Sum_probs=190.1
Q ss_pred HhcCCCcCCeeecccceEEEEEEecC-C---ceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCce
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQD-G---MEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~~-~---~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 688 (897)
..++|++.+.||+|+||.||+|++.. + ..||+|+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 35689999999999999999998663 3 279999987542 34467889999999999999999999999877655
Q ss_pred ------EEEEEeccCCChhHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEE
Q 045539 689 ------ALIMKYMPNGSLENCLYSGT-----CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 757 (897)
Q Consensus 689 ------~lv~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~k 757 (897)
++||||+++++|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHH---HcCCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999886432 2589999999999999999999 889999999999999999999999
Q ss_pred EeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhc
Q 045539 758 ISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDL 836 (897)
Q Consensus 758 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 836 (897)
|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~---- 251 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYNY---- 251 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHH----
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHHH----
Confidence 999999987654443333444567889999999988899999999999999999999 89998763211 11111
Q ss_pred CCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 837 LPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 837 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
+........+ .....++.+++.+||+.|| ++|||++|+++.|+
T Consensus 252 -------~~~~~~~~~~-------~~~~~~l~~li~~~l~~dp-~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 252 -------LIGGNRLKQP-------PECMEEVYDLMYQCWSADP-KQRPSFTCLRMELE 294 (323)
T ss_dssp -------HHTTCCCCCC-------TTCCHHHHHHHHHTTCSSG-GGSCCHHHHHHHHH
T ss_pred -------HhcCCCCCCC-------CccCHHHHHHHHHHccCCh-hhCcCHHHHHHHHH
Confidence 1111101111 1223457899999999999 99999999998875
No 111
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.5e-39 Score=358.23 Aligned_cols=211 Identities=26% Similarity=0.340 Sum_probs=185.0
Q ss_pred ccccccCCHHHHHHHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-----CCc
Q 045539 601 PQAIRRFSYHELLRATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIR-----HRN 674 (897)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~n 674 (897)
......+++.+.....++|++.+.||+|+||.||+|++. +++.||||+++.. ....+.+..|++++++++ |||
T Consensus 19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~ 97 (360)
T 3llt_A 19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNN 97 (360)
T ss_dssp -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCC
Confidence 345666777777777899999999999999999999874 6899999999753 333466778999999997 999
Q ss_pred cceEeeeecCCCceEEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC-
Q 045539 675 LVKIISSCSNDDFKALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE- 752 (897)
Q Consensus 675 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~- 752 (897)
|+++++++...+..++||||+ +++|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||+++.
T Consensus 98 iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 98 IVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYL---RKMSLTHTDLKPENILLDDP 173 (360)
T ss_dssp BCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCT
T ss_pred eecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCcccEEEccc
Confidence 999999999999999999999 999999987655 4589999999999999999999 8899999999999999975
Q ss_pred ------------------------CCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHH
Q 045539 753 ------------------------DMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIM 808 (897)
Q Consensus 753 ------------------------~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvi 808 (897)
++.+||+|||+|....... ....||+.|+|||++.+..++.++|||||||+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 248 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHH
Confidence 7899999999998654322 24568999999999999999999999999999
Q ss_pred HHHHHcCCCCCcc
Q 045539 809 LMEMFTKKKPTDE 821 (897)
Q Consensus 809 l~elltg~~p~~~ 821 (897)
+|||++|+.||..
T Consensus 249 l~ell~g~~pf~~ 261 (360)
T 3llt_A 249 LAELYTGSLLFRT 261 (360)
T ss_dssp HHHHHHSSCSCCC
T ss_pred HHHHHHCCCCCCC
Confidence 9999999999975
No 112
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.2e-39 Score=352.54 Aligned_cols=250 Identities=20% Similarity=0.231 Sum_probs=182.6
Q ss_pred CCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCccceEeeeecCCCceEEEEEeccCCC
Q 045539 622 NNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIR-HRNLVKIISSCSNDDFKALIMKYMPNGS 699 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 699 (897)
.+.||+|+||.||+|.+. +|+.||||++.+.. ...+.+|+.++++++ ||||+++++++.+++..|+||||+++++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG---HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh---hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999876 68999999997543 356678999999997 9999999999999999999999999999
Q ss_pred hhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC---cEEEeeccCccccCCCCceeee
Q 045539 700 LENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM---VAHISDFGIAKLLSGEDQLSIQ 776 (897)
Q Consensus 700 L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~---~~kL~DFg~a~~~~~~~~~~~~ 776 (897)
|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++ .+||+|||+++....... ..
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~ 166 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHM---HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PL 166 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--cc
Confidence 999998764 589999999999999999999 889999999999999997665 899999999986643322 22
Q ss_pred eccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhhh
Q 045539 777 IQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEERF 856 (897)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 856 (897)
....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ......+++.......+...
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----------~~~~~~~~~~~i~~~~~~~~ 236 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL----------TCTSAVEIMKKIKKGDFSFE 236 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----------------CCCHHHHHHHHTTTCCCCC
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccc----------ccccHHHHHHHHHcCCCCCC
Confidence 34568999999999999999999999999999999999999997632210 00111222222222221111
Q ss_pred HHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 857 FAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 857 ~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.........++.+++.+|++.|| ++|||++|+++
T Consensus 237 ~~~~~~~s~~~~~li~~~L~~dP-~~Rpt~~ell~ 270 (325)
T 3kn6_A 237 GEAWKNVSQEAKDLIQGLLTVDP-NKRLKMSGLRY 270 (325)
T ss_dssp SHHHHTSCHHHHHHHHHHHCCCT-TTCCCTTTSTT
T ss_pred cccccCCCHHHHHHHHHHCCCCh-hHCCCHHHHhc
Confidence 12223445668899999999999 99999999874
No 113
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.5e-40 Score=359.55 Aligned_cols=260 Identities=23% Similarity=0.368 Sum_probs=209.3
Q ss_pred HHHhcCCCcCCeeecccceEEEEEEecC-C-----ceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCccceEeeeecC
Q 045539 613 LRATDRFSENNLIGIGSFGSIYVARLQD-G-----MEVAVKVFHQQY-ERALKSFEDECEVMKRI-RHRNLVKIISSCSN 684 (897)
Q Consensus 613 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~-~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 684 (897)
....++|++.+.||+|+||.||+|.+.. + +.||+|++.... ....+.+.+|+++++++ +||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3446789999999999999999998642 2 479999987553 34457889999999999 89999999999999
Q ss_pred CCceEEEEEeccCCChhHhhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeC
Q 045539 685 DDFKALIMKYMPNGSLENCLYSG-------------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLD 751 (897)
Q Consensus 685 ~~~~~lv~e~~~~gsL~~~l~~~-------------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~ 751 (897)
++..++||||+++|+|.+++... ...+++..+..++.|++.||+|| |++||+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHH---hcCCcccCCcccceEEEC
Confidence 99999999999999999998653 23579999999999999999999 788999999999999999
Q ss_pred CCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchh
Q 045539 752 EDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLN 830 (897)
Q Consensus 752 ~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~ 830 (897)
.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||++ |..||....... .
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~-- 275 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-K-- 275 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-H--
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-H--
Confidence 999999999999987654444334444567889999999888889999999999999999999 999987632111 1
Q ss_pred HHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 831 RWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 831 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
....+........+ ......+.+++.+||+.|| ++|||++||++.|++
T Consensus 276 ----------~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~~p-~~Rps~~~l~~~L~~ 323 (333)
T 2i1m_A 276 ----------FYKLVKDGYQMAQP------AFAPKNIYSIMQACWALEP-THRPTFQQICSFLQE 323 (333)
T ss_dssp ----------HHHHHHHTCCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred ----------HHHHHhcCCCCCCC------CCCCHHHHHHHHHHhccCh-hhCcCHHHHHHHHHH
Confidence 11111111111100 0112457889999999999 999999999998863
No 114
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.6e-39 Score=348.14 Aligned_cols=268 Identities=18% Similarity=0.221 Sum_probs=200.4
Q ss_pred cCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
++|++.+.||+|+||+||+|+.. +|+.||+|+++... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 58999999999999999999876 58999999987443 2344678899999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
|+++ ++.+.+......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC---HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-- 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--
Confidence 9975 66666665556799999999999999999999 88899999999999999999999999999998764322
Q ss_pred eeeeccccCcccCCcCccCCCC-CCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCc---hHHHHh---h
Q 045539 774 SIQIQTLATIGYMAPEYGTKGR-VCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPV---SVMEVI---D 846 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~i---~ 846 (897)
.......||+.|+|||++.+.. ++.++||||+||++|||++|..||.................... ...... +
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 2223456899999999887665 79999999999999999999888643221111111111100000 000000 0
Q ss_pred hh---hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 847 TN---LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 847 ~~---l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.. .................++.+++.+|++.|| ++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~R~t~~e~l~ 282 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNP-VQRISAEEALQ 282 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSG-GGSCCHHHHHT
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccCh-hhCCCHHHHhc
Confidence 00 0000000000001223457899999999999 99999999986
No 115
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-39 Score=357.07 Aligned_cols=260 Identities=20% Similarity=0.289 Sum_probs=201.6
Q ss_pred HHHHHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-----HHHHHHHHHHHHHHHhcCCCccceEeeeecC
Q 045539 611 ELLRATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-----ERALKSFEDECEVMKRIRHRNLVKIISSCSN 684 (897)
Q Consensus 611 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 684 (897)
++....++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 34567789999999999999999999875 68899999987653 2345788999999999999999999999999
Q ss_pred CCceEEEEEeccCCChhHhhhcC---------------------------------------CCCCCHHHHHHHHHHHHH
Q 045539 685 DDFKALIMKYMPNGSLENCLYSG---------------------------------------TCMLDIFQRLNIMIDVAL 725 (897)
Q Consensus 685 ~~~~~lv~e~~~~gsL~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~ 725 (897)
++..++||||+++|+|.+++... ...+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999988521 112357778899999999
Q ss_pred HHHHHHhcCCCCcEeCCCCCCCeeeCCCC--cEEEeeccCccccCCCC--ceeeeeccccCcccCCcCccCC--CCCCcc
Q 045539 726 ALEYLHFGHSTPIIHCDLKPSNVLLDEDM--VAHISDFGIAKLLSGED--QLSIQIQTLATIGYMAPEYGTK--GRVCTR 799 (897)
Q Consensus 726 ~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~--~~kL~DFg~a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~--~~~~~~ 799 (897)
||+|| |++||+||||||+||+++.++ .+||+|||++....... .........||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYL---HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHH---HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHH---HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999 788999999999999998776 89999999998654322 1122345579999999998764 678999
Q ss_pred chHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCC
Q 045539 800 GDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESR 879 (897)
Q Consensus 800 sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 879 (897)
+|||||||++|||++|+.||......+ . ...++........+ ........+.+++.+|++.||
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~-~------------~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p 319 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDAD-T------------ISQVLNKKLCFENP----NYNVLSPLARDLLSNLLNRNV 319 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHH-H------------HHHHHHCCCCTTSG----GGGGSCHHHHHHHHHHSCSCT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHH-H------------HHHHHhcccccCCc----ccccCCHHHHHHHHHHcCCCh
Confidence 999999999999999999997532110 0 11111111111100 011223457899999999999
Q ss_pred CCCCCCHHHHHh
Q 045539 880 DGNGADMGWIFS 891 (897)
Q Consensus 880 ~~~RPt~~evl~ 891 (897)
++|||+.|+++
T Consensus 320 -~~Rps~~~~l~ 330 (345)
T 3hko_A 320 -DERFDAMRALQ 330 (345)
T ss_dssp -TTSCCHHHHHH
T ss_pred -hHCCCHHHHhc
Confidence 99999999986
No 116
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=353.52 Aligned_cols=246 Identities=20% Similarity=0.216 Sum_probs=194.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.++||+|+||+||+|++. +|+.||||++.... .........|+..+.++ +||||++++++|.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 368999999999999999999876 69999999986432 23334455566666555 899999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+ +++|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL---HSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 9999 7799998877666799999999999999999999 78899999999999999999999999999998764332
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ... .+.......
T Consensus 212 ---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~------------~~~~~~~~~ 271 (311)
T 3p1a_A 212 ---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GWQ------------QLRQGYLPP 271 (311)
T ss_dssp ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HHH------------HHTTTCCCH
T ss_pred ---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHH------------HHhccCCCc
Confidence 2234569999999998765 78999999999999999999977664311 011 111111100
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
........++.+++.+|++.|| ++|||++|+++.
T Consensus 272 ------~~~~~~~~~l~~li~~~L~~dP-~~Rpt~~ell~h 305 (311)
T 3p1a_A 272 ------EFTAGLSSELRSVLVMMLEPDP-KLRATAEALLAL 305 (311)
T ss_dssp ------HHHTTSCHHHHHHHHHHSCSST-TTSCCHHHHHTS
T ss_pred ------ccccCCCHHHHHHHHHHcCCCh-hhCcCHHHHHhC
Confidence 0111234568899999999999 999999999873
No 117
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.1e-39 Score=346.83 Aligned_cols=254 Identities=21% Similarity=0.319 Sum_probs=194.8
Q ss_pred hcCCCcCCeeecccceEEEEEEecC----CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQD----GMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
.++|++.+.||+|+||.||+|.+.. +..||+|+++... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 5689999999999999999998642 4579999987543 344578899999999999999999999985 456899
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
||||+++++|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 9999999999999987766799999999999999999999 7899999999999999999999999999999876533
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhh
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNL 849 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 849 (897)
.. .......+++.|+|||+.....++.++||||||+++|||++ |..||...... .....+. ....
T Consensus 170 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i~-----------~~~~ 235 (281)
T 1mp8_A 170 TY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIE-----------NGER 235 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHH-----------TTCC
T ss_pred cc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHHH-----------cCCC
Confidence 22 12233456789999999888889999999999999999997 99999763221 1111111 1000
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
...+ ..+...+.+++.+||+.|| ++|||++|+++.|++
T Consensus 236 ~~~~-------~~~~~~l~~li~~~l~~~p-~~Rps~~~l~~~l~~ 273 (281)
T 1mp8_A 236 LPMP-------PNCPPTLYSLMTKCWAYDP-SRRPRFTELKAQLST 273 (281)
T ss_dssp CCCC-------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred CCCC-------CCCCHHHHHHHHHHccCCh-hhCcCHHHHHHHHHH
Confidence 0001 1223457899999999999 999999999998853
No 118
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=358.24 Aligned_cols=252 Identities=20% Similarity=0.268 Sum_probs=189.8
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4578999999999999999999876 58899999997653 33678899999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC---CCcEEEeeccCccccCCC
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE---DMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~---~~~~kL~DFg~a~~~~~~ 770 (897)
|+++++|.+++.... .+++.++..++.|++.||+|| |+.||+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYL---HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 999999999987654 589999999999999999999 7889999999999999975 889999999999876432
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.............. .....
T Consensus 205 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~------------~~~~~ 269 (349)
T 2w4o_A 205 V---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRIL------------NCEYY 269 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHH------------TTCCC
T ss_pred c---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHH------------hCCCc
Confidence 2 22345689999999999998999999999999999999999999965322111111111 11000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
... +.......++.+++.+|++.|| ++|||++|+++.
T Consensus 270 ~~~----~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~e~l~h 306 (349)
T 2w4o_A 270 FIS----PWWDEVSLNAKDLVRKLIVLDP-KKRLTTFQALQH 306 (349)
T ss_dssp CCT----TTTTTSCHHHHHHHHTTSCSSG-GGSCCHHHHHHS
T ss_pred cCC----chhhhCCHHHHHHHHHHccCCh-hhCcCHHHHhcC
Confidence 000 0001223457899999999999 999999999873
No 119
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=357.39 Aligned_cols=252 Identities=20% Similarity=0.304 Sum_probs=196.7
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechh--hHHHHHHHHHHHHHHHhcCC--CccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQ--YERALKSFEDECEVMKRIRH--RNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++| |||+++++++.+++..|+|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4679999999999999999999888999999998643 24455788999999999986 9999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|| +.+++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++ ++.+||+|||++.......
T Consensus 88 ~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~l---H~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp EC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred Ee-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 99 56889999998754 589999999999999999999 788999999999999997 5789999999998775444
Q ss_pred ceeeeeccccCcccCCcCccCC-----------CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCch
Q 045539 772 QLSIQIQTLATIGYMAPEYGTK-----------GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVS 840 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 840 (897)
.........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~------------ 229 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK------------ 229 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH------------
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH------------
Confidence 3333445679999999998753 67899999999999999999999999753211111
Q ss_pred HHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 841 VMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 841 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
....++.......+. ....++.+++.+||+.|| ++|||++|+++.
T Consensus 230 ~~~~~~~~~~~~~~~------~~~~~l~~li~~~L~~dp-~~Rpt~~e~l~h 274 (343)
T 3dbq_A 230 LHAIIDPNHEIEFPD------IPEKDLQDVLKCCLKRDP-KQRISIPELLAH 274 (343)
T ss_dssp HHHHHCTTSCCCCCC------CSCHHHHHHHHHHTCSST-TTSCCHHHHHTS
T ss_pred HHHHhcCCcccCCcc------cCCHHHHHHHHHHcCCCh-hHCCCHHHHHhC
Confidence 112222111111110 112347889999999999 999999999864
No 120
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.1e-39 Score=354.65 Aligned_cols=255 Identities=24% Similarity=0.423 Sum_probs=207.5
Q ss_pred hcCCCcCCeeecccceEEEEEEec--------CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCccceEeeeecCC
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ--------DGMEVAVKVFHQQY-ERALKSFEDECEVMKRI-RHRNLVKIISSCSND 685 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 685 (897)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+++++++ +||||+++++++.++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 578999999999999999999863 46789999997543 34567889999999999 899999999999999
Q ss_pred CceEEEEEeccCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee
Q 045539 686 DFKALIMKYMPNGSLENCLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL 750 (897)
Q Consensus 686 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll 750 (897)
+..++||||+++++|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCccceEEE
Confidence 99999999999999999997654 2488999999999999999999 88999999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccch
Q 045539 751 DEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSL 829 (897)
Q Consensus 751 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~ 829 (897)
+.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~- 267 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--E- 267 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H-
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--H-
Confidence 9999999999999987765444333444567889999999888889999999999999999999 99998753111 1
Q ss_pred hHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 830 NRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 830 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
....+......... ..+..++.+++.+||+.|| ++|||++|+++.|+
T Consensus 268 -----------~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 268 -----------LFKLLKEGHRMDKP------ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLD 314 (334)
T ss_dssp -----------HHHHHHHTCCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred -----------HHHHHhcCCCCCCC------ccCCHHHHHHHHHHccCCh-hhCcCHHHHHHHHH
Confidence 11111111100000 1223457899999999999 99999999999885
No 121
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=8.5e-40 Score=358.03 Aligned_cols=267 Identities=23% Similarity=0.315 Sum_probs=211.0
Q ss_pred hcCCCcCCeeecccceEEEEEEe-----cCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeec--CCCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-----QDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCS--NDDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 688 (897)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 36899999999999999999984 358899999998776666788999999999999999999999885 55678
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
++||||+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+....
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 999999999999999987655699999999999999999999 78999999999999999999999999999998775
Q ss_pred CCCcee-eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHH---
Q 045539 769 GEDQLS-IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEV--- 844 (897)
Q Consensus 769 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 844 (897)
...... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||........ ..+...........+
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL--RMMGCERDVPALSRLLEL 256 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH--HHCC----CCHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhh--hhcccccccccHHHHHHH
Confidence 443322 22334578889999999888899999999999999999999999865321100 000000001111111
Q ss_pred hhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 845 IDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 845 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
+........ ...+..++.+++.+||+.|| ++|||++|+++.|+
T Consensus 257 ~~~~~~~~~------~~~~~~~l~~li~~~l~~dP-~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 257 LEEGQRLPA------PPACPAEVHELMKLCWAPSP-QDRPSFSALGPQLD 299 (327)
T ss_dssp HHTTCCCCC------CTTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred hhcccCCCC------CCcccHHHHHHHHHHcCCCh-hhCcCHHHHHHHHH
Confidence 111111111 11234568899999999999 99999999998885
No 122
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=8.2e-39 Score=359.05 Aligned_cols=272 Identities=17% Similarity=0.250 Sum_probs=204.9
Q ss_pred hcCCCcCCeeecc--cceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 616 TDRFSENNLIGIG--SFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G--~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
.++|++.+.||+| +||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+++..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 5689999999999 99999999876 69999999997553 4456788899999999999999999999999999999
Q ss_pred EEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 691 IMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
||||+++++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI---HHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999987652 4589999999999999999999 889999999999999999999999999998865432
Q ss_pred CCce-----eeeeccccCcccCCcCccCC--CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCch--
Q 045539 770 EDQL-----SIQIQTLATIGYMAPEYGTK--GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVS-- 840 (897)
Q Consensus 770 ~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 840 (897)
.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..........+..
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKLNGTVPCLLD 259 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT-HHHHC----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHhcCCCCcccc
Confidence 2111 11123468999999999877 678999999999999999999999997632221 1111111100000
Q ss_pred ---------------------HHHHhhhhhcc---hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 841 ---------------------VMEVIDTNLLR---GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 841 ---------------------~~~~i~~~l~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
..+.+...... ......+.......++.+++.+||+.|| ++|||++|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP-~~Rpta~ell~h 334 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNP-DARPSASTLLNH 334 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCT-TTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCc-ccCCCHHHHhcC
Confidence 00000000000 0000001112334568899999999999 999999999853
No 123
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.4e-39 Score=343.68 Aligned_cols=252 Identities=18% Similarity=0.299 Sum_probs=204.0
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 578999999999999999999875 58999999987543 345577889999999999999999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc---EEEeeccCccccCC
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV---AHISDFGIAKLLSG 769 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~---~kL~DFg~a~~~~~ 769 (897)
||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++. +||+|||.+.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999988887654 589999999999999999999 8899999999999999986655 99999999987653
Q ss_pred CCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhh
Q 045539 770 EDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNL 849 (897)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 849 (897)
... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... ..... +.....
T Consensus 161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~-----------~~~~~~ 224 (284)
T 3kk8_A 161 SEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQ-----------IKAGAY 224 (284)
T ss_dssp SCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH-----------HHHTCC
T ss_pred Ccc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHH-----------HHhccc
Confidence 322 23456899999999999999999999999999999999999999652111 00000 011000
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
. .+. +.......++.+++.+|++.|| ++|||++|+++.
T Consensus 225 ~-~~~---~~~~~~~~~~~~li~~~l~~dp-~~Rps~~~~l~h 262 (284)
T 3kk8_A 225 D-YPS---PEWDTVTPEAKSLIDSMLTVNP-KKRITADQALKV 262 (284)
T ss_dssp C-CCT---TTTTTSCHHHHHHHHHHSCSST-TTSCCHHHHTTS
T ss_pred c-CCc---hhhcccCHHHHHHHHHHcccCh-hhCCCHHHHhcC
Confidence 0 000 0001223457899999999999 999999999873
No 124
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.1e-38 Score=340.38 Aligned_cols=254 Identities=22% Similarity=0.302 Sum_probs=207.0
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3568999999999999999999876 68999999987543 334578899999999999999999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+........
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp ECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 9999999999987653 589999999999999999999 789999999999999999999999999999987643332
Q ss_pred eeeeeccccCcccCCcCccCCCCC-CccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRV-CTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
........|++.|+|||...+..+ +.++||||||+++|||++|+.||............+...... .
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------~ 228 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY------------L 228 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT------------S
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc------------c
Confidence 223345578999999999877665 789999999999999999999997643322222222211100 0
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.. .......+.+++.+|++.|| ++|||++|+++
T Consensus 229 ~~------~~~~~~~~~~li~~~l~~~p-~~Rps~~~il~ 261 (276)
T 2yex_A 229 NP------WKKIDSAPLALLHKILVENP-SARITIPDIKK 261 (276)
T ss_dssp TT------GGGSCHHHHHHHHHHSCSST-TTSCCHHHHTT
T ss_pred Cc------hhhcCHHHHHHHHHHCCCCc-hhCCCHHHHhc
Confidence 00 01123457889999999999 99999999986
No 125
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=7.2e-39 Score=355.60 Aligned_cols=250 Identities=22% Similarity=0.319 Sum_probs=202.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++.+.. ....+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 468999999999999999999876 58899999997653 23356788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYL---QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 99999999999988754 589999999999999999999 88999999999999999999999999999998765332
Q ss_pred ceeeeeccccCcccCCcCccCC---CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 772 QLSIQIQTLATIGYMAPEYGTK---GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ... ....+...
T Consensus 170 ---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~---------~~~~~~~~ 235 (384)
T 4fr4_A 170 ---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKE---------IVHTFETT 235 (384)
T ss_dssp ---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHH---------HHHHHHHC
T ss_pred ---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHH---------HHHHHhhc
Confidence 2335679999999998763 458999999999999999999999997522111 110 11111111
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCC-HHHHHh
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGAD-MGWIFS 891 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt-~~evl~ 891 (897)
....+. ....++.+++.+||+.|| ++||+ +++|.+
T Consensus 236 ~~~~p~-------~~s~~~~~li~~lL~~dP-~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 VVTYPS-------AWSQEMVSLLKKLLEPNP-DQRFSQLSDVQN 271 (384)
T ss_dssp CCCCCT-------TSCHHHHHHHHHHSCSSG-GGSCCSHHHHHT
T ss_pred ccCCCC-------cCCHHHHHHHHHHhcCCH-hHhcccHHHHHc
Confidence 111111 123457899999999999 99998 676654
No 126
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-39 Score=345.89 Aligned_cols=254 Identities=22% Similarity=0.378 Sum_probs=207.9
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEec
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKYM 695 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 695 (897)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 468899999999999999999998889999999986532 2367889999999999999999999999999999999999
Q ss_pred cCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCceee
Q 045539 696 PNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSI 775 (897)
Q Consensus 696 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~ 775 (897)
++++|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+....... ...
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~ 161 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 161 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEECCCCCEEEccccccccccccc-ccc
Confidence 99999999988766789999999999999999999 88999999999999999999999999999998664321 111
Q ss_pred eeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhh
Q 045539 776 QIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEE 854 (897)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 854 (897)
.....+++.|+|||+..+..++.++||||+|+++|||++ |+.||...... ...+. +........+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~------------i~~~~~~~~~ 227 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVED------------ISTGFRLYKP 227 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHH------------HHTTCCCCCC
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHHH------------HhcCCcCCCC
Confidence 223456788999999888889999999999999999999 89998752111 01111 1110000000
Q ss_pred hhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 855 RFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 855 ~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
......+.+++.+||+.|| ++|||++|+++.|++
T Consensus 228 ------~~~~~~l~~li~~~l~~~p-~~Rps~~~ll~~L~~ 261 (267)
T 3t9t_A 228 ------RLASTHVYQIMNHCWRERP-EDRPAFSRLLRQLAE 261 (267)
T ss_dssp ------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred ------ccCcHHHHHHHHHHccCCh-hhCcCHHHHHHHHHH
Confidence 0112457889999999999 999999999998853
No 127
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.4e-39 Score=344.37 Aligned_cols=250 Identities=25% Similarity=0.395 Sum_probs=193.2
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhH----HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYE----RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|++. |+.||+|+++.... ...+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 468999999999999999999976 89999999875432 2356788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC---cEeCCCCCCCeeeCC--------CCcEEEee
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP---IIHCDLKPSNVLLDE--------DMVAHISD 760 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~---ivH~Dlkp~NIll~~--------~~~~kL~D 760 (897)
|||+++++|.+++... .+++..+..++.|++.||+|| |++| |+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~l---H~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYL---HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHH---HHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999998654 489999999999999999999 6666 999999999999986 67899999
Q ss_pred ccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCch
Q 045539 761 FGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVS 840 (897)
Q Consensus 761 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 840 (897)
||.+........ ....||+.|+|||...+..++.++||||||+++|+|++|+.||........
T Consensus 160 fg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------------- 222 (271)
T 3dtc_A 160 FGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV------------- 222 (271)
T ss_dssp CCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-------------
T ss_pred CCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------------
Confidence 999986543322 234689999999998888899999999999999999999999976321100
Q ss_pred HHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 841 VMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 841 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.............+ ..+..++.+++.+||+.|| ++|||++|+++.|++
T Consensus 223 ~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~~p-~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 223 AYGVAMNKLALPIP------STCPEPFAKLMEDCWNPDP-HSRPSFTNILDQLTT 270 (271)
T ss_dssp HHHHHTSCCCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHC
T ss_pred HHhhhcCCCCCCCC------cccCHHHHHHHHHHhcCCc-ccCcCHHHHHHHHhc
Confidence 00111111110000 1223457899999999999 999999999999874
No 128
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.9e-39 Score=353.29 Aligned_cols=245 Identities=21% Similarity=0.270 Sum_probs=203.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE---RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.+... ...+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 468999999999999999999876 689999999976532 3456788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++|+|.+++.... .+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 99999999999987654 489999999999999999999 88999999999999999999999999999998764322
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .. ...+......
T Consensus 196 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~-----------~~~i~~~~~~- 256 (350)
T 1rdq_E 196 -----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--QI-----------YEKIVSGKVR- 256 (350)
T ss_dssp -----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH-----------HHHHHHCCCC-
T ss_pred -----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH--HH-----------HHHHHcCCCC-
Confidence 2456899999999999999999999999999999999999999752110 00 0111111110
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCC-----HHHHHh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGAD-----MGWIFS 891 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt-----~~evl~ 891 (897)
.+. ....++.+++.+|++.|| ++||+ ++||++
T Consensus 257 ~p~-------~~~~~~~~li~~lL~~dp-~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 257 FPS-------HFSSDLKDLLRNLLQVDL-TKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CCT-------TCCHHHHHHHHHHSCSCT-TTCTTSSTTTTHHHHT
T ss_pred CCC-------CCCHHHHHHHHHHhhcCH-HhccCCccCCHHHHHh
Confidence 010 123457899999999999 99998 777764
No 129
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8.6e-40 Score=353.81 Aligned_cols=270 Identities=22% Similarity=0.369 Sum_probs=207.3
Q ss_pred hcCCCcCCeeecccceEEEEEEe-----cCCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCC--Cc
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-----QDGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSND--DF 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 687 (897)
.++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++.+. ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35689999999999999999983 368999999997543 23457789999999999999999999999876 66
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
.++||||+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++...
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHh---hcCCcccCCCchheEEEcCCCCEEECcccccccc
Confidence 8999999999999999976666799999999999999999999 8899999999999999999999999999999877
Q ss_pred CCCCce-eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCch-HHHHh
Q 045539 768 SGEDQL-SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVS-VMEVI 845 (897)
Q Consensus 768 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i 845 (897)
...... .......||..|+|||++.+..++.++||||+|+++|||++|..|+...... ............ ...+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHH
Confidence 544332 2233456888899999998888999999999999999999999986542111 001111111111 11111
Q ss_pred hhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 846 DTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 846 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
......... +....+..++.+++.+||+.|| ++|||++|++++|++
T Consensus 254 ~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp-~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 254 NTLKEGKRL---PCPPNCPDEVYQLMRKCWEFQP-SNRTSFQNLIEGFEA 299 (302)
T ss_dssp HHHHTTCCC---CCCTTCCHHHHHHHHHTTCSSG-GGSCCHHHHHHHHHH
T ss_pred HHHhccCCC---CCCCCCCHHHHHHHHHHcCCCC-CCCCCHHHHHHHHHH
Confidence 111100000 0001233568899999999999 999999999999863
No 130
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=7.1e-39 Score=349.68 Aligned_cols=252 Identities=17% Similarity=0.252 Sum_probs=205.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHH------HHHHHHHHHHHHHhcCCCccceEeeeecCCCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYER------ALKSFEDECEVMKRIRHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 688 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 568999999999999999999876 6899999998754321 357789999999999999999999999999999
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC----cEEEeeccCc
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM----VAHISDFGIA 764 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~----~~kL~DFg~a 764 (897)
++||||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~l---H~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 99999999999999997654 589999999999999999999 789999999999999999887 7999999999
Q ss_pred cccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHH
Q 045539 765 KLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEV 844 (897)
Q Consensus 765 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (897)
........ .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...... ... ..+
T Consensus 167 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~-----------~~i 230 (321)
T 2a2a_A 167 HEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETL-----------ANI 230 (321)
T ss_dssp EECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHH-----------HHH
T ss_pred eecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--HHH-----------HHH
Confidence 87654322 23456899999999999889999999999999999999999999652111 000 001
Q ss_pred hhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 845 IDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 845 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
... ....+ ..........+.+++.+|++.|| ++|||++|+++.
T Consensus 231 ~~~-~~~~~---~~~~~~~~~~~~~li~~~l~~dp-~~Rps~~e~l~h 273 (321)
T 2a2a_A 231 TSV-SYDFD---EEFFSHTSELAKDFIRKLLVKET-RKRLTIQEALRH 273 (321)
T ss_dssp HTT-CCCCC---HHHHTTCCHHHHHHHHTTSCSST-TTSCCHHHHHHS
T ss_pred Hhc-ccccC---hhhhcccCHHHHHHHHHHcCCCh-hhCcCHHHHhcC
Confidence 000 00000 01111233457899999999999 999999999873
No 131
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6e-40 Score=375.24 Aligned_cols=257 Identities=24% Similarity=0.408 Sum_probs=208.4
Q ss_pred HHHHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 612 LLRATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 612 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
++...++|++.+.||+|+||.||+|++.+++.||||+++... ...+.+.+|++++++++||||+++++++. ++..++|
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 344567899999999999999999999888999999998643 34578899999999999999999999987 5678999
Q ss_pred EEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 692 MKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
|||+++|+|.+++.... ..+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 99999999999997543 3588999999999999999999 7899999999999999999999999999999876432
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhh
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNL 849 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 849 (897)
. ........++..|+|||++..+.++.++|||||||++|||++ |+.||...... .....+....
T Consensus 338 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--------------~~~~~i~~~~ 402 (454)
T 1qcf_A 338 E-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--------------EVIRALERGY 402 (454)
T ss_dssp H-HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------------HHHHHHHHTC
T ss_pred c-eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--------------HHHHHHHcCC
Confidence 1 111223346788999999988899999999999999999999 99999753111 1111111111
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
....+ ..+..++.+++.+||+.|| ++|||+++|++.|++
T Consensus 403 ~~~~~------~~~~~~l~~li~~cl~~dp-~~RPt~~~i~~~L~~ 441 (454)
T 1qcf_A 403 RMPRP------ENCPEELYNIMMRCWKNRP-EERPTFEYIQSVLDD 441 (454)
T ss_dssp CCCCC------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHT
T ss_pred CCCCC------CCCCHHHHHHHHHHccCCh-hHCcCHHHHHHHHHH
Confidence 10000 1234568899999999999 999999999998865
No 132
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=9.3e-40 Score=357.01 Aligned_cols=265 Identities=23% Similarity=0.351 Sum_probs=211.9
Q ss_pred CCHHHHHHHhcCCCcCCeeecccceEEEEEEec------CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEe
Q 045539 607 FSYHELLRATDRFSENNLIGIGSFGSIYVARLQ------DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKII 679 (897)
Q Consensus 607 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~ 679 (897)
+..+++....++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 334445556789999999999999999999754 36789999987543 34456788999999999999999999
Q ss_pred eeecCCCceEEEEEeccCCChhHhhhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee
Q 045539 680 SSCSNDDFKALIMKYMPNGSLENCLYSGT---------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL 750 (897)
Q Consensus 680 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll 750 (897)
+++.+++..++||||+++++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCCccCCCccceEEE
Confidence 99999999999999999999999986532 3468999999999999999999 78899999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccch
Q 045539 751 DEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSL 829 (897)
Q Consensus 751 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~ 829 (897)
+.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ..
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~ 249 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QV 249 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HH
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HH
Confidence 9999999999999986654333222333456889999999888889999999999999999999 88998652111 11
Q ss_pred hHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 830 NRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 830 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.+ .+........+ ..+...+.+++.+||+.|| ++|||++|+++.|++
T Consensus 250 ~~-----------~~~~~~~~~~~-------~~~~~~l~~li~~~l~~dp-~~Rps~~e~l~~L~~ 296 (322)
T 1p4o_A 250 LR-----------FVMEGGLLDKP-------DNCPDMLFELMRMCWQYNP-KMRPSFLEIISSIKE 296 (322)
T ss_dssp HH-----------HHHTTCCCCCC-------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHGG
T ss_pred HH-----------HHHcCCcCCCC-------CCCCHHHHHHHHHHcCCCc-ccCcCHHHHHHHHHH
Confidence 11 11111111111 1223457899999999999 999999999999875
No 133
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9.9e-39 Score=342.77 Aligned_cols=252 Identities=25% Similarity=0.405 Sum_probs=202.5
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH-------HHHHHHHHHHHHHHhcCCCccceEeeeecCCCc
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE-------RALKSFEDECEVMKRIRHRNLVKIISSCSNDDF 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 687 (897)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 468999999999999999999875 689999999864321 11267899999999999999999999997765
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEeCCCCCCCeeeCCCCc-----EEEee
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP--IIHCDLKPSNVLLDEDMV-----AHISD 760 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~--ivH~Dlkp~NIll~~~~~-----~kL~D 760 (897)
++||||+++++|.+++......+++..+..++.|++.||+|| |++| |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM---QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHH---HhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 699999999999999988777899999999999999999999 7888 999999999999988776 99999
Q ss_pred ccCccccCCCCceeeeeccccCcccCCcCcc--CCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCC
Q 045539 761 FGIAKLLSGEDQLSIQIQTLATIGYMAPEYG--TKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLP 838 (897)
Q Consensus 761 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 838 (897)
||+++..... .....||+.|+|||++ ....++.++||||+|+++|||++|+.||.............+
T Consensus 173 fg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~----- 242 (287)
T 4f0f_A 173 FGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI----- 242 (287)
T ss_dssp CTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH-----
T ss_pred CCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH-----
Confidence 9999754321 2345799999999987 455678999999999999999999999976322211111111
Q ss_pred chHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 839 VSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 839 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.......... ..+..++.+++.+||+.|| ++|||++|+++.|++
T Consensus 243 ------~~~~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 243 ------REEGLRPTIP------EDCPPRLRNVIELCWSGDP-KKRPHFSYIVKELSE 286 (287)
T ss_dssp ------HHSCCCCCCC------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHT
T ss_pred ------hccCCCCCCC------cccCHHHHHHHHHHhcCCh-hhCcCHHHHHHHHHh
Confidence 1111111000 1223457899999999999 999999999999875
No 134
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=8.5e-40 Score=357.58 Aligned_cols=254 Identities=21% Similarity=0.374 Sum_probs=201.2
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCce----EEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGME----VAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKA 689 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 689 (897)
.++|++.+.||+|+||.||+|++. +++. ||+|++.... ....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 357999999999999999999865 4554 7777765332 223356678999999999999999999986 45688
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
+||||+++|+|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHH---HHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHH---HhCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 99999999999999987766789999999999999999999 788999999999999999999999999999998765
Q ss_pred CCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 770 EDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
...........||..|+|||++.+..++.++||||||+++|||++ |+.||...... . ..+.+...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~------------~~~~~~~~ 233 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--E------------VPDLLEKG 233 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--H------------HHHHHHTT
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--H------------HHHHHHcC
Confidence 544444445668889999999988899999999999999999999 99999763211 1 11111111
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
.....+ ..+..++.+++.+||+.|| ++|||++|+++.|+
T Consensus 234 ~~~~~~------~~~~~~~~~li~~~l~~dp-~~Rps~~el~~~l~ 272 (325)
T 3kex_A 234 ERLAQP------QICTIDVYMVMVKCWMIDE-NIRPTFKELANEFT 272 (325)
T ss_dssp CBCCCC------TTBCTTTTHHHHHHTCSCT-TTSCCHHHHHHHHH
T ss_pred CCCCCC------CcCcHHHHHHHHHHcCCCh-hhCcCHHHHHHHHH
Confidence 110000 0112346789999999999 99999999999875
No 135
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.1e-39 Score=359.12 Aligned_cols=251 Identities=20% Similarity=0.303 Sum_probs=197.5
Q ss_pred cCCCcCCeeecccceEEEEEEecCCceEEEEEechh--hHHHHHHHHHHHHHHHhcC--CCccceEeeeecCCCceEEEE
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQ--YERALKSFEDECEVMKRIR--HRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 692 (897)
++|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 469999999999999999999888999999998644 2445678899999999997 599999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
| +.+++|.+++.... .+++.++..++.||+.||+|| |++||+||||||+||+++ ++.+||+|||+++.......
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~l---H~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56889999998765 588999999999999999999 899999999999999995 57999999999987654433
Q ss_pred eeeeeccccCcccCCcCccCC-----------CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchH
Q 045539 773 LSIQIQTLATIGYMAPEYGTK-----------GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSV 841 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 841 (897)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~------------~ 277 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK------------L 277 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH------------H
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH------------H
Confidence 333345679999999998754 46889999999999999999999999753211111 1
Q ss_pred HHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 842 MEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 842 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
..+++.......+. ....++.+++.+||+.|| ++|||++|+++.
T Consensus 278 ~~~~~~~~~~~~~~------~~~~~~~~li~~~L~~dP-~~Rps~~ell~h 321 (390)
T 2zmd_A 278 HAIIDPNHEIEFPD------IPEKDLQDVLKCCLKRDP-KQRISIPELLAH 321 (390)
T ss_dssp HHHHCTTSCCCCCC------CSCHHHHHHHHHHTCSST-TTSCCHHHHHTS
T ss_pred HHHhCccccCCCCc------cchHHHHHHHHHHcccCh-hhCCCHHHHhhC
Confidence 12222211111110 012347899999999999 999999999863
No 136
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.3e-39 Score=357.84 Aligned_cols=252 Identities=21% Similarity=0.263 Sum_probs=198.2
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 690 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++++.. ....+.+.+|..+++++ +||||+++++++.+++..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 468999999999999999999876 58899999998653 23345678899999887 79999999999999999999
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
||||+++|+|.+++.... .+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999999887654 589999999999999999999 8899999999999999999999999999999863322
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... ........+.+...-.
T Consensus 207 ~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~-----~~~~~~~~~~i~~~~~ 279 (396)
T 4dc2_A 207 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD-----QNTEDYLFQVILEKQI 279 (396)
T ss_dssp T--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-----------CCHHHHHHHHHHCCC
T ss_pred C--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccc-----hhhHHHHHHHHhcccc
Confidence 2 12345679999999999999999999999999999999999999996422111000 0000001111111100
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCH
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADM 886 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~ 886 (897)
..+. ....++.+++.+||+.|| ++||++
T Consensus 280 ~~p~-------~~s~~~~~li~~lL~~dP-~~R~~~ 307 (396)
T 4dc2_A 280 RIPR-------SLSVKAASVLKSFLNKDP-KERLGC 307 (396)
T ss_dssp CCCT-------TSCHHHHHHHHHHTCSCT-TTSTTC
T ss_pred CCCC-------cCCHHHHHHHHHHhcCCH-hHcCCC
Confidence 1111 123457899999999999 999996
No 137
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.9e-39 Score=352.07 Aligned_cols=266 Identities=22% Similarity=0.333 Sum_probs=213.1
Q ss_pred cCCHHHHHHHhcCCCcCCeeecccceEEEEEEe------cCCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCccce
Q 045539 606 RFSYHELLRATDRFSENNLIGIGSFGSIYVARL------QDGMEVAVKVFHQQY-ERALKSFEDECEVMKRI-RHRNLVK 677 (897)
Q Consensus 606 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~ 677 (897)
.+...++....++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+++++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 345556666678999999999999999999974 346889999997643 33456789999999999 6999999
Q ss_pred EeeeecCCC-ceEEEEEeccCCChhHhhhcCCCC---------------CCHHHHHHHHHHHHHHHHHHHhcCCCCcEeC
Q 045539 678 IISSCSNDD-FKALIMKYMPNGSLENCLYSGTCM---------------LDIFQRLNIMIDVALALEYLHFGHSTPIIHC 741 (897)
Q Consensus 678 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~---------------~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~ 741 (897)
+++++...+ ..++||||+++++|.+++...... +++..+..++.|++.||+|| |++||+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHH---HHTTCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHH---HhCCcccc
Confidence 999987654 589999999999999999876432 78999999999999999999 78999999
Q ss_pred CCCCCCeeeCCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCc
Q 045539 742 DLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTD 820 (897)
Q Consensus 742 Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~ 820 (897)
||||+||+++.++.+||+|||.+................||+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999987655444444445568899999999988899999999999999999998 999987
Q ss_pred ccccCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 821 EIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
...... .. ...+......... .....++.+++.+||+.|| ++|||++||++.|+
T Consensus 253 ~~~~~~-~~------------~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~ell~~L~ 306 (316)
T 2xir_A 253 GVKIDE-EF------------CRRLKEGTRMRAP------DYTTPEMYQTMLDCWHGEP-SQRPTFSELVEHLG 306 (316)
T ss_dssp TCCCSH-HH------------HHHHHHTCCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred ccchhH-HH------------HHHhccCccCCCC------CCCCHHHHHHHHHHcCCCh-hhCcCHHHHHHHHH
Confidence 632111 11 1111111000000 0122457889999999999 99999999999885
No 138
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.8e-39 Score=359.90 Aligned_cols=254 Identities=26% Similarity=0.278 Sum_probs=197.0
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHH-HHhcCCCccceEeeeecCCCceEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEV-MKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++++.. ....+.+.+|..+ ++.++||||+++++++.+++..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 468999999999999999999876 58899999997653 2234556677776 467899999999999999999999
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
||||++||+|.+++.... .+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYL---HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999987654 588999999999999999999 8899999999999999999999999999999864322
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +. ...++.....
T Consensus 193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~--------~~~i~~~~~~ 257 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----EM--------YDNILNKPLQ 257 (373)
T ss_dssp C--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-----HH--------HHHHHHSCCC
T ss_pred C--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-----HH--------HHHHHhcccC
Confidence 2 1234567999999999999999999999999999999999999999752111 00 1111111111
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCCCC
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDPNP 897 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~~~ 897 (897)
-.. .....+.+++.+|++.|| ++||++.+.++++.++|
T Consensus 258 ~~~--------~~~~~~~~li~~lL~~dp-~~R~~~~~~~~~i~~h~ 295 (373)
T 2r5t_A 258 LKP--------NITNSARHLLEGLLQKDR-TKRLGAKDDFMEIKSHV 295 (373)
T ss_dssp CCS--------SSCHHHHHHHHHHTCSSG-GGSTTTTTTHHHHHTSG
T ss_pred CCC--------CCCHHHHHHHHHHcccCH-HhCCCCCCCHHHHhCCc
Confidence 000 122457889999999999 99999976666666554
No 139
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=7.4e-39 Score=350.11 Aligned_cols=248 Identities=21% Similarity=0.307 Sum_probs=193.2
Q ss_pred hcCCCcCCeeecccceEEEEEEe----cCCceEEEEEechhh----HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCc
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL----QDGMEVAVKVFHQQY----ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDF 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 687 (897)
.++|++.+.||+|+||.||+|+. .+|+.||+|++++.. ......+.+|++++++++||||+++++++.+++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46899999999999999999986 468999999997542 2334567889999999999999999999999999
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
.|+||||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHL---HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHH---HhCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999987654 588999999999999999999 7889999999999999999999999999998764
Q ss_pred CCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhh
Q 045539 768 SGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDT 847 (897)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 847 (897)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .. ...+...
T Consensus 172 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~--------~~~i~~~ 236 (327)
T 3a62_A 172 IHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-----KT--------IDKILKC 236 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HH--------HHHHHHT
T ss_pred ccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-----HH--------HHHHHhC
Confidence 3222 1233457999999999998889999999999999999999999999752111 00 1111111
Q ss_pred hhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCC-----CHHHHHh
Q 045539 848 NLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGA-----DMGWIFS 891 (897)
Q Consensus 848 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RP-----t~~evl~ 891 (897)
... .+. ....++.+++.+||+.|| ++|| +++|+++
T Consensus 237 ~~~-~p~-------~~~~~~~~li~~~L~~dp-~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 237 KLN-LPP-------YLTQEARDLLKKLLKRNA-ASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CCC-CCT-------TSCHHHHHHHHHHSCSCG-GGSTTSSTTTHHHHHH
T ss_pred CCC-CCC-------CCCHHHHHHHHHHHhcCH-hhccCCCCCCHHHHHc
Confidence 111 011 123457899999999999 9999 7778765
No 140
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.8e-39 Score=349.01 Aligned_cols=258 Identities=20% Similarity=0.274 Sum_probs=187.8
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE-RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
.++|++.+.||+|+||.||+|... +|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 568999999999999999999875 589999999875432 234677899999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 694 YMPNGSLENCLYSGT-----CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
|++ ++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC---HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 58988876432 3589999999999999999999 78999999999999999999999999999998764
Q ss_pred CCCceeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhh--c---------
Q 045539 769 GEDQLSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIND--L--------- 836 (897)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~--~--------- 836 (897)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ........ .
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhhh
Confidence 3221 1234568999999998866 468999999999999999999999997532111 11111100 0
Q ss_pred -------------CCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 837 -------------LPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 837 -------------~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.+....+.+.+.... ....++.+++.+|++.|| ++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~li~~~L~~dP-~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKE----------PLDGNLMDFLHGLLQLNP-DMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSS----------CCCHHHHHHHHHHSCSSG-GGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccc----------cCCHHHHHHHHHHCCCCc-ccCCCHHHHhC
Confidence 000011111111111 123458899999999999 99999999976
No 141
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=350.96 Aligned_cols=265 Identities=25% Similarity=0.357 Sum_probs=199.4
Q ss_pred HHHHHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhc--CCCccceEeeeecCC---
Q 045539 611 ELLRATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRI--RHRNLVKIISSCSND--- 685 (897)
Q Consensus 611 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~--- 685 (897)
.-....++|++.+.||+|+||.||+|++. |+.||||++..... ..+.+|.+++... +||||+++++++.+.
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 33445679999999999999999999886 89999999875432 3344555666555 899999999999776
Q ss_pred -CceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC--------CcEeCCCCCCCeeeCCCCcE
Q 045539 686 -DFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST--------PIIHCDLKPSNVLLDEDMVA 756 (897)
Q Consensus 686 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~--------~ivH~Dlkp~NIll~~~~~~ 756 (897)
...++||||+++|+|.+++.... +++..+..++.|++.||+|| |++ ||+||||||+||+++.++.+
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~l---H~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHL---HTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHH---HSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCceEEEEeccCCCcHHHHhhccC--CCHHHHHHHHHHHHHHHHHH---HHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 67899999999999999997754 89999999999999999999 555 99999999999999999999
Q ss_pred EEeeccCccccCCCCcee--eeeccccCcccCCcCccCCCCCCcc------chHHHHHHHHHHHHcC----------CCC
Q 045539 757 HISDFGIAKLLSGEDQLS--IQIQTLATIGYMAPEYGTKGRVCTR------GDVYSYGIMLMEMFTK----------KKP 818 (897)
Q Consensus 757 kL~DFg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------sDv~slGvil~elltg----------~~p 818 (897)
||+|||++.......... ......||+.|+|||++.+...+.+ +|||||||++|||++| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 999999997664332211 1124469999999999877766655 9999999999999999 445
Q ss_pred CcccccCccchhHHhhhcCCchHHHHhh-hhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 819 TDEIFIGELSLNRWINDLLPVSVMEVID-TNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
|............ ..+.+. .......+... ...++..++.+++.+||+.|| ++|||++||++.|++
T Consensus 262 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dP-~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 262 YHDLVPSDPSYED---------MREIVCIKKLRPSFPNRW-SSDECLRQMGKLMTECWAHNP-ASRLTALRVKKTLAK 328 (337)
T ss_dssp TTTTSCSSCCHHH---------HHHHHTTSCCCCCCCGGG-GGSHHHHHHHHHHHHHSCSSG-GGSCCHHHHHHHHHH
T ss_pred HhhhcCCCCchhh---------hHHHHhhhccCccccccc-hhhHHHHHHHHHHHHhhhhCh-hhCCCHHHHHHHHHH
Confidence 5432222111111 111111 11111111111 112456778999999999999 999999999999863
No 142
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.7e-39 Score=373.33 Aligned_cols=255 Identities=24% Similarity=0.422 Sum_probs=209.7
Q ss_pred HhcCCCcCCeeecccceEEEEEEecC-CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQD-GMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
..++|++.+.||+|+||.||+|++.. ++.||||+++... ...+.+.+|++++++++||||++++++|.+++..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 35678999999999999999998874 8899999997543 235778999999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 694 YMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
|+++|+|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 372 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT- 372 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-
Confidence 999999999997643 5689999999999999999999 88999999999999999999999999999998765332
Q ss_pred eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
........+++.|+|||++....++.++|||||||++|||++ |+.||...... ...+.+......
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--------------~~~~~~~~~~~~ 438 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------QVYELLEKDYRM 438 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------------GHHHHHHTTCCC
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--------------HHHHHHHcCCCC
Confidence 222233456788999999988889999999999999999999 99998763211 111222221111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
..+ ..+..++.+++.+||+.|| ++|||++||++.|++
T Consensus 439 ~~~------~~~~~~l~~li~~cl~~dP-~~RPs~~el~~~L~~ 475 (495)
T 1opk_A 439 ERP------EGCPEKVYELMRACWQWNP-SDRPSFAEIHQAFET 475 (495)
T ss_dssp CCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHT
T ss_pred CCC------CCCCHHHHHHHHHHcCcCh-hHCcCHHHHHHHHHH
Confidence 111 1233457899999999999 999999999998864
No 143
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=341.76 Aligned_cols=249 Identities=22% Similarity=0.380 Sum_probs=185.0
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE---RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 468999999999999999999874 689999999975532 2347789999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++++|.+++......+++.++..++.|+++||+|| |++||+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL---HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999988767799999999999999999999 78999999999999999999999999999998764322
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
. ......||+.|+|||...+..++.++||||||+++|||++|+.||....... ... ........
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~--------~~~~~~~~- 230 (278)
T 3cok_A 167 E--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----TLN--------KVVLADYE- 230 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CCSSCCC-
T ss_pred C--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----HHH--------HHhhcccC-
Confidence 1 1223568999999999988889999999999999999999999997532111 000 00000000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.+. ....++.+++.+|++.|| ++|||++|+++
T Consensus 231 ~~~-------~~~~~~~~li~~~l~~dp-~~Rps~~~~l~ 262 (278)
T 3cok_A 231 MPS-------FLSIEAKDLIHQLLRRNP-ADRLSLSSVLD 262 (278)
T ss_dssp CCT-------TSCHHHHHHHHHHSCSSG-GGSCCHHHHTT
T ss_pred Ccc-------ccCHHHHHHHHHHcccCH-hhCCCHHHHhc
Confidence 000 122357889999999999 99999999986
No 144
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.4e-39 Score=349.68 Aligned_cols=254 Identities=24% Similarity=0.420 Sum_probs=210.1
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
..++|++.+.||+|+||.||+|.+. +++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4678999999999999999999876 48899999987543 345778899999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 694 YMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
|+++++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHH---HHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHH---HHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 999999999997643 5689999999999999999999 788999999999999999999999999999987654332
Q ss_pred eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
.......+|+.|+|||...+..++.++||||||+++|+|++ |..||...... . ..+.+......
T Consensus 167 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~------------~~~~~~~~~~~ 231 (288)
T 3kfa_A 167 -TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--Q------------VYELLEKDYRM 231 (288)
T ss_dssp -EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G------------HHHHHHTTCCC
T ss_pred -ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--H------------HHHHHhccCCC
Confidence 33344567889999999988899999999999999999999 99998753211 1 11222211111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
... ..+..++.+++.+|++.|| ++|||++|+++.|+
T Consensus 232 ~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 232 ERP------EGCPEKVYELMRACWQWNP-SDRPSFAEIHQAFE 267 (288)
T ss_dssp CCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred CCC------CCCCHHHHHHHHHHhCCCh-hhCcCHHHHHHHHH
Confidence 111 1223457899999999999 99999999999875
No 145
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-38 Score=355.67 Aligned_cols=271 Identities=20% Similarity=0.274 Sum_probs=193.4
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcC-CCccceEeeeecCCC--c
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQ--YERALKSFEDECEVMKRIR-HRNLVKIISSCSNDD--F 687 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 687 (897)
...++|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.+++++. ||||+++++++..++ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 45679999999999999999999865 6899999998643 2344567889999999997 999999999996543 7
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
.|+||||++ ++|.+++... .+++..+..++.|++.||+|| |+.||+||||||+||+++.++.+||+|||+|+..
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYL---HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999997 6899988775 489999999999999999999 8899999999999999999999999999999865
Q ss_pred CCCC-------------------ceeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCcc
Q 045539 768 SGED-------------------QLSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGEL 827 (897)
Q Consensus 768 ~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~ 827 (897)
.... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~ 238 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM-N 238 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-H
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 3211 1112334579999999998876 67899999999999999999999999753211 1
Q ss_pred chhHHhhhc-----------CCchHHHHhhhhh------cchhhhhHHHHH----------HHHHHHHHHHhHccCCCCC
Q 045539 828 SLNRWINDL-----------LPVSVMEVIDTNL------LRGEERFFAAKE----------QILLSVLNLATECTIESRD 880 (897)
Q Consensus 828 ~~~~~~~~~-----------~~~~~~~~i~~~l------~~~~~~~~~~~~----------~~~~~l~~l~~~cl~~dP~ 880 (897)
.+...+... ........++... .......++... .+..++.+++.+||+.||
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP- 317 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP- 317 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG-
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc-
Confidence 111111100 0000111111000 000000011111 223468899999999999
Q ss_pred CCCCCHHHHHhh
Q 045539 881 GNGADMGWIFSA 892 (897)
Q Consensus 881 ~~RPt~~evl~~ 892 (897)
++|||++|+++.
T Consensus 318 ~~R~t~~e~l~H 329 (388)
T 3oz6_A 318 NKRISANDALKH 329 (388)
T ss_dssp GGSCCHHHHTTS
T ss_pred ccCCCHHHHhCC
Confidence 999999999864
No 146
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.3e-38 Score=349.92 Aligned_cols=252 Identities=21% Similarity=0.264 Sum_probs=199.6
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 690 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++++.. ....+.+.+|..+++++ +||||+++++++.+++..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 467999999999999999999876 58999999997653 34456788999999988 79999999999999999999
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
||||+++|+|.+++.... .+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 88 v~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999987654 589999999999999999999 8899999999999999999999999999999864322
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.......... ........+.+...-.
T Consensus 164 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-----~~~~~~~~~~i~~~~~ 236 (345)
T 3a8x_A 164 GD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD-----QNTEDYLFQVILEKQI 236 (345)
T ss_dssp TC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC------------CHHHHHHHHHHCCC
T ss_pred CC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccc-----cccHHHHHHHHHcCCC
Confidence 21 2334579999999999999999999999999999999999999996521110000 0000001111111100
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCH
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADM 886 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~ 886 (897)
.-+. ....++.+++.+||+.|| ++||++
T Consensus 237 ~~p~-------~~s~~~~~li~~lL~~dP-~~R~~~ 264 (345)
T 3a8x_A 237 RIPR-------SLSVKAASVLKSFLNKDP-KERLGC 264 (345)
T ss_dssp CCCT-------TSCHHHHHHHHHHTCSST-TTSTTC
T ss_pred CCCC-------CCCHHHHHHHHHHhcCCH-hHCCCC
Confidence 0111 123457889999999999 999996
No 147
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.4e-38 Score=359.49 Aligned_cols=201 Identities=23% Similarity=0.387 Sum_probs=169.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCC-----Cc
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSND-----DF 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 687 (897)
.++|++.+.||+|+||.||+|++. +|+.||||+++... ....+++.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 569999999999999999999875 58899999997532 34557889999999999999999999999766 57
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
.|+||||++ ++|.+++.... .+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~L---H~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFI---HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999985 69999987654 589999999999999999999 8899999999999999999999999999999876
Q ss_pred CCCCce--------------------eeeeccccCcccCCcCcc-CCCCCCccchHHHHHHHHHHHHcCCCCCcc
Q 045539 768 SGEDQL--------------------SIQIQTLATIGYMAPEYG-TKGRVCTRGDVYSYGIMLMEMFTKKKPTDE 821 (897)
Q Consensus 768 ~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDv~slGvil~elltg~~p~~~ 821 (897)
...... ......+||+.|+|||++ ....++.++||||+||++|||++|..||..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 533221 123456799999999975 566799999999999999999997766643
No 148
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=8.9e-39 Score=351.80 Aligned_cols=249 Identities=20% Similarity=0.244 Sum_probs=201.7
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKA 689 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 689 (897)
..++|++.+.||+|+||.||+|+.. +|+.||+|++++.. ....+.+.+|.++++.+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999999876 48899999998653 23456778899999988 7999999999999999999
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
+||||++||+|.+++.... .+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999987654 489999999999999999999 889999999999999999999999999999986432
Q ss_pred CCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhh
Q 045539 770 EDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNL 849 (897)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 849 (897)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .. ...+.....
T Consensus 174 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~-----------~~~i~~~~~ 238 (353)
T 2i0e_A 174 DGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--EL-----------FQSIMEHNV 238 (353)
T ss_dssp TTC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH-----------HHHHHHCCC
T ss_pred CCc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--HH-----------HHHHHhCCC
Confidence 221 233457999999999999999999999999999999999999999752111 00 011111111
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCC-----HHHHHh
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGAD-----MGWIFS 891 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt-----~~evl~ 891 (897)
. .+ .....++.+++.+|++.|| ++||+ ++|+++
T Consensus 239 ~-~p-------~~~s~~~~~li~~lL~~dP-~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 A-YP-------KSMSKEAVAICKGLMTKHP-GKRLGCGPEGERDIKE 276 (353)
T ss_dssp C-CC-------TTSCHHHHHHHHHHTCSCT-TSCTTCSTTHHHHHHT
T ss_pred C-CC-------CCCCHHHHHHHHHHhhcCH-HHcCCCCCCCHHHHhc
Confidence 0 01 0123457899999999999 99995 466654
No 149
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.8e-39 Score=352.27 Aligned_cols=267 Identities=22% Similarity=0.370 Sum_probs=206.6
Q ss_pred cCC-CcCCeeecccceEEEEEEec-----CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecC--CCc
Q 045539 617 DRF-SENNLIGIGSFGSIYVARLQ-----DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSN--DDF 687 (897)
Q Consensus 617 ~~y-~~~~~lg~G~~g~Vy~a~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~ 687 (897)
++| ++.+.||+|+||.||++.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+ ...
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 345 89999999999999988642 58899999998653 3456788999999999999999999999976 457
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
.++||||+++++|.+++.... +++.++..++.|++.||+|| |+.||+||||||+||+++.++.+||+|||.+...
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~L---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYL---HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEEcCCCCEEECCccccccc
Confidence 899999999999999998765 89999999999999999999 8899999999999999999999999999999887
Q ss_pred CCCCce-eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCC-chHHHHh
Q 045539 768 SGEDQL-SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLP-VSVMEVI 845 (897)
Q Consensus 768 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~i 845 (897)
...... .......+|..|+|||++.+..++.++||||||+++|||++|+.||............+...... ....+.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL 264 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH
Confidence 644332 22334467888999999988889999999999999999999999987532111000000000000 0111222
Q ss_pred hhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 846 DTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 846 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
......... ..+..++.+++.+||+.|| ++|||++|+++.|++
T Consensus 265 ~~~~~~~~~------~~~~~~l~~li~~~l~~dP-~~Rps~~ell~~L~~ 307 (318)
T 3lxp_A 265 ERGERLPRP------DKCPAEVYHLMKNCWETEA-SFRPTFENLIPILKT 307 (318)
T ss_dssp HTTCCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred hcccCCCCC------ccccHHHHHHHHHHcCCCc-ccCcCHHHHHHHHHH
Confidence 211111111 1234568899999999999 999999999998853
No 150
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=5.2e-39 Score=350.09 Aligned_cols=269 Identities=19% Similarity=0.239 Sum_probs=200.3
Q ss_pred hcCCCcC-CeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEEEE
Q 045539 616 TDRFSEN-NLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 616 ~~~y~~~-~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 692 (897)
.++|.+. +.||+|+||.||+|+.. +++.||||++........+.+.+|++++.++ +||||+++++++.+++..|+||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4678874 78999999999999865 6899999999766545567888999999995 6999999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc---EEEeeccCccccCC
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV---AHISDFGIAKLLSG 769 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~---~kL~DFg~a~~~~~ 769 (897)
||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++. +||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFL---HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 9999999999987654 589999999999999999999 7889999999999999998775 99999999876542
Q ss_pred CCc-----eeeeeccccCcccCCcCccCC-----CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCc
Q 045539 770 EDQ-----LSIQIQTLATIGYMAPEYGTK-----GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPV 839 (897)
Q Consensus 770 ~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 839 (897)
... ........||+.|+|||++.. ..++.++|||||||++|||++|+.||......+.. |.......
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~ 243 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG---WDRGEACP 243 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC---C----CCH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc---ccccccch
Confidence 211 111223458999999998764 56789999999999999999999999764322211 10000000
Q ss_pred h-HHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 840 S-VMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 840 ~-~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
. ...+.....................++.+++.+|++.|| ++|||++|+++.
T Consensus 244 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rps~~e~l~h 296 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDA-KQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSST-TTSCCHHHHHHS
T ss_pred hHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCCh-hhCCCHHHHhcC
Confidence 0 111111111111110011112344568899999999999 999999999873
No 151
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=353.57 Aligned_cols=254 Identities=24% Similarity=0.374 Sum_probs=197.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCce----EEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGME----VAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKA 689 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 689 (897)
.++|++.+.||+|+||.||+|++. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++.++. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 468999999999999999999864 4554 4666664332 334578899999999999999999999998765 78
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
+|+||+++|+|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 99999999999999988777799999999999999999999 789999999999999999999999999999987754
Q ss_pred CCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 770 EDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... . ....+...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~------------~~~~~~~~ 235 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--E------------ISSILEKG 235 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--G------------HHHHHHTT
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--H------------HHHHHHcC
Confidence 443333444567889999999988899999999999999999999 99999763221 1 11222211
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
...... ..+..++.+++.+||+.|| ++|||++|+++.|+
T Consensus 236 ~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 236 ERLPQP------PICTIDVYMIMRKCWMIDA-DSRPKFRELIIEFS 274 (327)
T ss_dssp CCCCCC------TTBCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred CCCCCC------ccCCHHHHHHHHHHcCCCh-hHCcCHHHHHHHHH
Confidence 111110 1123457889999999999 99999999999875
No 152
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.1e-39 Score=356.80 Aligned_cols=253 Identities=23% Similarity=0.250 Sum_probs=192.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 568999999999999999999876 689999999875432 235678999999999999999999999999999999999
Q ss_pred ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc--EEEeeccCccccCCCCc
Q 045539 695 MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV--AHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 695 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~--~kL~DFg~a~~~~~~~~ 772 (897)
+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~L---H~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYC---HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 99999999987644 589999999999999999999 8899999999999999987765 9999999997543221
Q ss_pred eeeeeccccCcccCCcCccCCCCCCcc-chHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRVCTR-GDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||....... .. ...+......
T Consensus 173 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~------------~~~~~~~~~~ 237 (361)
T 3uc3_A 173 --QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DY------------RKTIQRILSV 237 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CH------------HHHHHHHHTT
T ss_pred --CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HH------------HHHHHHHhcC
Confidence 2234569999999999877777655 899999999999999999997632211 11 1111111111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
... .+.......++.+++.+||+.|| ++|||++|+++.
T Consensus 238 ~~~--~~~~~~~s~~~~~li~~~L~~dP-~~Rps~~ell~h 275 (361)
T 3uc3_A 238 KYS--IPDDIRISPECCHLISRIFVADP-ATRISIPEIKTH 275 (361)
T ss_dssp CCC--CCTTSCCCHHHHHHHHHHSCSCT-TTSCCHHHHHTS
T ss_pred CCC--CCCcCCCCHHHHHHHHHHccCCh-hHCcCHHHHHhC
Confidence 000 00000122457899999999999 999999999864
No 153
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.2e-39 Score=341.12 Aligned_cols=249 Identities=25% Similarity=0.388 Sum_probs=202.0
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCC--CceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSND--DFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 691 (897)
.++|++.+.||+|+||.||+|++. ++.||+|+++... ....+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 468999999999999999999986 8999999987543 34557899999999999999999999999877 788999
Q ss_pred EEeccCCChhHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 692 MKYMPNGSLENCLYSGTC-MLDIFQRLNIMIDVALALEYLHFGHSTP--IIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~Lh~~h~~~--ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
|||+++++|.+++..... .+++.++..++.|++.||+|| |++| |+||||||+||+++.++.++++|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL---HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHH---TTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHH---hcCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999987653 589999999999999999999 8888 9999999999999999999999999876533
Q ss_pred CCCceeeeeccccCcccCCcCccCCCCCCc---cchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHh
Q 045539 769 GEDQLSIQIQTLATIGYMAPEYGTKGRVCT---RGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVI 845 (897)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i 845 (897)
.. ...||+.|+|||.+.+..++. ++||||||+++|||++|+.||........ .....
T Consensus 165 ~~-------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-------------~~~~~ 224 (271)
T 3kmu_A 165 SP-------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-------------GMKVA 224 (271)
T ss_dssp CT-------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-------------HHHHH
T ss_pred cc-------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-------------HHHHH
Confidence 22 345899999999987655544 79999999999999999999975321110 01111
Q ss_pred hhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 846 DTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 846 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
........+ ..+..++.+++.+||+.|| ++|||++|+++.|++
T Consensus 225 ~~~~~~~~~------~~~~~~~~~li~~~l~~~p-~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 225 LEGLRPTIP------PGISPHVSKLMKICMNEDP-AKRPKFDMIVPILEK 267 (271)
T ss_dssp HSCCCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred hcCCCCCCC------CCCCHHHHHHHHHHcCCCh-hhCcCHHHHHHHHHH
Confidence 111110000 1123457899999999999 999999999998863
No 154
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.2e-39 Score=346.26 Aligned_cols=253 Identities=23% Similarity=0.411 Sum_probs=204.8
Q ss_pred HhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
..++|++.+.||+|+||.||+|+..+++.||+|+++... ...+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 457899999999999999999998888899999987543 234678899999999999999999999875 458999999
Q ss_pred ccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 695 MPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 695 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
+++++|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||++++++.+||+|||.+....... .
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 164 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-Y 164 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-E
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-c
Confidence 99999999987543 2589999999999999999999 88999999999999999999999999999998765332 2
Q ss_pred eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcch
Q 045539 774 SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRG 852 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 852 (897)
.......++..|+|||...+..++.++||||||+++|||++ |+.||...... ... ..+.......
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~------------~~~~~~~~~~ 230 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVI------------QNLERGYRMV 230 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHH------------HHHHTTCCCC
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHH------------HHHhcccCCC
Confidence 22233456789999999888889999999999999999999 89998752111 111 1111110000
Q ss_pred hhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 853 EERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 853 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
.. ..+..++.+++.+|++.|| ++|||++++++.|+
T Consensus 231 ~~------~~~~~~l~~li~~~l~~~p-~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 231 RP------DNCPEELYQLMRLCWKERP-EDRPTFDYLRSVLE 265 (279)
T ss_dssp CC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred Cc------ccccHHHHHHHHHHhccCh-hhCCCHHHHHHHHH
Confidence 00 1123457899999999999 99999999999875
No 155
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-38 Score=359.88 Aligned_cols=247 Identities=24% Similarity=0.374 Sum_probs=204.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE---RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|.+.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 468999999999999999999876 799999999976532 2356789999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++++|.+++.... .+++.++..++.||+.||+|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYC---HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999999987654 589999999999999999999 89999999999999999999999999999998765432
Q ss_pred ceeeeeccccCcccCCcCccCCCCC-CccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRV-CTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
. .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ... ..+.+...
T Consensus 171 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~-----------~~i~~~~~- 233 (476)
T 2y94_A 171 F---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLF-----------KKICDGIF- 233 (476)
T ss_dssp C---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHH-----------HHHHTTCC-
T ss_pred c---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHH-----------HHHhcCCc-
Confidence 2 234569999999999887765 78999999999999999999999752111 111 11111111
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..+. ....++.+++.+||+.|| ++|||++|+++
T Consensus 234 ~~p~-------~~s~~~~~Li~~~L~~dP-~~Rpt~~eil~ 266 (476)
T 2y94_A 234 YTPQ-------YLNPSVISLLKHMLQVDP-MKRATIKDIRE 266 (476)
T ss_dssp CCCT-------TCCHHHHHHHHHHTCSST-TTSCCHHHHHT
T ss_pred CCCc-------cCCHHHHHHHHHHcCCCc-hhCcCHHHHHh
Confidence 1111 122347889999999999 99999999986
No 156
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=8.2e-39 Score=365.15 Aligned_cols=247 Identities=28% Similarity=0.421 Sum_probs=202.1
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCC-ceEEEEEe
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDD-FKALIMKY 694 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 694 (897)
.++|++.+.||+|+||.||+|++. |+.||||+++... ..+.+.+|++++++++||||+++++++.+.+ ..|+||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 468889999999999999999886 7899999998653 3467899999999999999999999986654 78999999
Q ss_pred ccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 695 MPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 695 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
+++|+|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 99999999998654 3479999999999999999999 8899999999999999999999999999999854322
Q ss_pred eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcch
Q 045539 774 SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRG 852 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 852 (897)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... . ....+.......
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~------------~~~~i~~~~~~~ 406 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--D------------VVPRVEKGYKMD 406 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--T------------HHHHHHTTCCCC
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H------------HHHHHHcCCCCC
Confidence 112357889999999999999999999999999999998 99999763211 1 111111111100
Q ss_pred hhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 853 EERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 853 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
.+ ..+..++.+++.+||+.|| ++|||++|+++.|+
T Consensus 407 ~p------~~~~~~l~~li~~cl~~dp-~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 407 AP------DGCPPAVYDVMKNCWHLDA-ATRPTFLQLREQLE 441 (450)
T ss_dssp CC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred CC------CcCCHHHHHHHHHHcCCCh-hHCcCHHHHHHHHH
Confidence 10 1233567899999999999 99999999999885
No 157
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.6e-38 Score=351.14 Aligned_cols=258 Identities=21% Similarity=0.305 Sum_probs=206.9
Q ss_pred HHHHHHHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--------HHHHHHHHHHHHHHHhc-CCCccceE
Q 045539 609 YHELLRATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--------ERALKSFEDECEVMKRI-RHRNLVKI 678 (897)
Q Consensus 609 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l 678 (897)
........++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+++++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444556678999999999999999999876 69999999986432 22356788999999999 79999999
Q ss_pred eeeecCCCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEE
Q 045539 679 ISSCSNDDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHI 758 (897)
Q Consensus 679 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL 758 (897)
++++...+..|+||||+++++|.+++.... .+++..+..++.|++.||+|| |+.||+||||||+||+++.++.+||
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~L---H~~gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFL---HANNIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEE
Confidence 999999999999999999999999987653 589999999999999999999 7889999999999999999999999
Q ss_pred eeccCccccCCCCceeeeeccccCcccCCcCccC------CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHH
Q 045539 759 SDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGT------KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRW 832 (897)
Q Consensus 759 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~ 832 (897)
+|||++........ .....||+.|+|||++. ...++.++|||||||++|||++|+.||...... ....
T Consensus 242 ~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~- 315 (365)
T 2y7j_A 242 SDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LMLR- 315 (365)
T ss_dssp CCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-
T ss_pred EecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHHH-
Confidence 99999987654332 23457999999999864 336889999999999999999999999652110 0000
Q ss_pred hhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 833 INDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 833 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.+....... ..+........+.+++.+|++.|| ++|||++|+++
T Consensus 316 ----------~i~~~~~~~----~~~~~~~~~~~~~~li~~~L~~dP-~~Rps~~ell~ 359 (365)
T 2y7j_A 316 ----------MIMEGQYQF----SSPEWDDRSSTVKDLISRLLQVDP-EARLTAEQALQ 359 (365)
T ss_dssp ----------HHHHTCCCC----CHHHHSSSCHHHHHHHHHHSCSST-TTSCCHHHHHH
T ss_pred ----------HHHhCCCCC----CCcccccCCHHHHHHHHHHcCCCh-hHCcCHHHHhc
Confidence 111100000 011112234557899999999999 99999999987
No 158
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.5e-39 Score=347.01 Aligned_cols=256 Identities=22% Similarity=0.273 Sum_probs=197.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 578999999999999999999876 68999999997543 33457889999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAA---HAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999987654 589999999999999999999 88999999999999999999999999999997664332
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
. .......|++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+....+.
T Consensus 189 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~------------ 253 (309)
T 2h34_A 189 L-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR------------ 253 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC------------
T ss_pred c-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC------------
Confidence 1 2223456899999999999999999999999999999999999999763211 111111111100
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCC-CHHHHHhhcCC
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGA-DMGWIFSALDP 895 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RP-t~~evl~~L~~ 895 (897)
.. .....+..++.+++.+||+.|| ++|| +++++++.|++
T Consensus 254 ~~----~~~~~~~~~l~~li~~~l~~dP-~~Rp~s~~~l~~~l~~ 293 (309)
T 2h34_A 254 PS----TVRPGIPVAFDAVIARGMAKNP-EDRYVTCGDLSAAAHA 293 (309)
T ss_dssp GG----GTSTTCCTHHHHHHHHHTCSSG-GGSCSSHHHHHHHHHH
T ss_pred cc----ccCCCCCHHHHHHHHHhccCCH-HHHHHhHHHHHHHHHH
Confidence 00 0001223457889999999999 9999 99999998753
No 159
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.8e-39 Score=346.41 Aligned_cols=249 Identities=20% Similarity=0.309 Sum_probs=202.9
Q ss_pred hcCCCcCCeeecccceEEEEEEecC-C-------ceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCc
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQD-G-------MEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDF 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 687 (897)
.++|.+.+.||+|+||.||+|+... + +.||+|++........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 4689999999999999999997653 3 4699999987766667889999999999999999999999999999
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc--------EEEe
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV--------AHIS 759 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~--------~kL~ 759 (897)
.++||||+++++|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---hhCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 9999999999999999988776699999999999999999999 8899999999999999988876 9999
Q ss_pred eccCccccCCCCceeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCC
Q 045539 760 DFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLP 838 (897)
Q Consensus 760 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 838 (897)
|||.+...... ....||+.|+|||++.+ ..++.++||||||+++|||++|..|+....... ..
T Consensus 164 Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-~~--------- 227 (289)
T 4fvq_A 164 DPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-RK--------- 227 (289)
T ss_dssp CCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HH---------
T ss_pred cCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH-HH---------
Confidence 99998765322 23458899999998877 678999999999999999999655543311110 00
Q ss_pred chHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 839 VSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 839 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.......... +. ....++.+++.+||+.|| ++|||++|+++.|++
T Consensus 228 ---~~~~~~~~~~-~~-------~~~~~l~~li~~~l~~dp-~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 228 ---LQFYEDRHQL-PA-------PKAAELANLINNCMDYEP-DHRPSFRAIIRDLNS 272 (289)
T ss_dssp ---HHHHHTTCCC-CC-------CSSCTTHHHHHHHSCSSG-GGSCCHHHHHHHHHT
T ss_pred ---HHHhhccCCC-CC-------CCCHHHHHHHHHHcCCCh-hHCcCHHHHHHHHHH
Confidence 0000000000 00 012347889999999999 999999999999875
No 160
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=8.7e-39 Score=342.06 Aligned_cols=253 Identities=21% Similarity=0.322 Sum_probs=201.6
Q ss_pred hcCCCcCCeeecccceEEEEEEecC----CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQD----GMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
.++|++.+.||+|+||.||+|++.. +..||+|+++... ....+.+.+|++++++++||||+++++++.++ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 5689999999999999999998642 3459999987652 34567899999999999999999999998764 5689
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
||||+++++|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 9999999999999987666799999999999999999999 8899999999999999999999999999999876533
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhh
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNL 849 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 849 (897)
.. .......+++.|+|||+..+..++.++||||||+++|||++ |+.||...... ..... +....
T Consensus 167 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~------------~~~~~ 231 (281)
T 3cc6_A 167 DY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGV------------LEKGD 231 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHH------------HHHTC
T ss_pred cc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHH------------HhcCC
Confidence 22 12234457889999999988889999999999999999998 99999753211 11111 11110
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
....+ ..+...+.+++.+||+.|| ++|||++|+++.|+
T Consensus 232 ~~~~~------~~~~~~l~~li~~~l~~~p-~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 232 RLPKP------DLCPPVLYTLMTRCWDYDP-SDRPRFTELVCSLS 269 (281)
T ss_dssp CCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred CCCCC------CCCCHHHHHHHHHHccCCc-hhCcCHHHHHHHHH
Confidence 00000 0123457899999999999 99999999999885
No 161
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.5e-40 Score=357.04 Aligned_cols=261 Identities=24% Similarity=0.348 Sum_probs=190.2
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHh--cCCCccceEeeeecCCC----ceE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKR--IRHRNLVKIISSCSNDD----FKA 689 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 689 (897)
.++|++.+.||+|+||.||+|++. |+.||||++.... ...+.+|.+++.. ++||||+++++++.+.+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 468999999999999999999876 8999999987543 3456678888887 68999999999997766 789
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CCCcEeCCCCCCCeeeCCCCcEEEeec
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGH--------STPIIHCDLKPSNVLLDEDMVAHISDF 761 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h--------~~~ivH~Dlkp~NIll~~~~~~kL~DF 761 (897)
+||||+++|+|.+++.... +++..+..++.|++.||+|| | ++||+||||||+||+++.++.+||+||
T Consensus 78 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~l~~l---H~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHL---HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEECCTTCCHHHHHHHCC--BCC-CHHHHC-CHHHHHC-C---CCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEEeccCCCCHHHHHhccC--cchHHHHHHHHHHHHHHHHH---HHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeec
Confidence 9999999999999997654 78888999999999999999 6 999999999999999999999999999
Q ss_pred cCccccCCCCcee--eeeccccCcccCCcCccCCC------CCCccchHHHHHHHHHHHHcC----------CCCCcccc
Q 045539 762 GIAKLLSGEDQLS--IQIQTLATIGYMAPEYGTKG------RVCTRGDVYSYGIMLMEMFTK----------KKPTDEIF 823 (897)
Q Consensus 762 g~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~slGvil~elltg----------~~p~~~~~ 823 (897)
|++.......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997665433321 12234699999999988765 445789999999999999999 45554321
Q ss_pred cCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 824 IGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
...... ......+.........+.++.. .++...+.+++.+||+.|| ++|||++||+++|++
T Consensus 233 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP-~~Rps~~~i~~~L~~ 294 (303)
T 3gxj_A 233 PSDPSV--------EEMRKVVCEQKLRPNIPNRWQS-CEALRVMAKIMRECWYANG-AARLTALRIKKTLSQ 294 (303)
T ss_dssp C-CCCC--------C-CHHHHTTSCCCCCCCGGGGS-SHHHHHHHHHHHTTCCSSG-GGSCCHHHHHHHHHC
T ss_pred CCCccH--------HHHHHHHHHhhcCCCccccccc-hhhHHHHHHHHHHHhccCc-ccCCCHHHHHHHHHH
Confidence 111110 1112222333333333322221 2445678999999999999 999999999999864
No 162
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=354.63 Aligned_cols=261 Identities=18% Similarity=0.199 Sum_probs=197.8
Q ss_pred hcCCCcCCeeecccceEEEEEEec----CCceEEEEEechhhHH-----------HHHHHHHHHHHHHhcCCCccceEee
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ----DGMEVAVKVFHQQYER-----------ALKSFEDECEVMKRIRHRNLVKIIS 680 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 680 (897)
.++|++.+.||+|+||.||+|+.. ++..||+|++...... ..+.+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 468999999999999999999875 5788999998643211 1234667889999999999999999
Q ss_pred eecC----CCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC--
Q 045539 681 SCSN----DDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM-- 754 (897)
Q Consensus 681 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~-- 754 (897)
++.+ +...|+||||+ +++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYI---HENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCcCHHHEEEccCCCC
Confidence 9877 77899999999 999999988765 689999999999999999999 788999999999999998877
Q ss_pred cEEEeeccCccccCCCCce-----eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccch
Q 045539 755 VAHISDFGIAKLLSGEDQL-----SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSL 829 (897)
Q Consensus 755 ~~kL~DFg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~ 829 (897)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999876432211 11134468999999999998899999999999999999999999996532221111
Q ss_pred hHHh---hhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 830 NRWI---NDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 830 ~~~~---~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.... ....+..... ... ......++.+++.+||+.|| ++|||++||++.|++
T Consensus 271 ~~~~~~~~~~~~~~~~~----~~~---------~~~~~~~l~~li~~~l~~dp-~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 271 QTAKTNLLDELPQSVLK----WAP---------SGSSCCEIAQFLVCAHSLAY-DEKPNYQALKKILNP 325 (345)
T ss_dssp HHHHHHHHHTTTHHHHH----HSC---------TTSCCHHHHHHHHHHHTCCT-TCCCCHHHHHHHHCT
T ss_pred HHHHHhhcccccHHHHh----hcc---------ccccHHHHHHHHHHHhhcCc-ccCCCHHHHHHHHhc
Confidence 1110 0001100000 000 00233468999999999999 999999999999975
No 163
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-38 Score=338.48 Aligned_cols=246 Identities=22% Similarity=0.349 Sum_probs=179.9
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 368999999999999999999865 68999999987542 23356788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+ ++++.+++.... .+++.++..++.|++.||+|| |++||+||||||+||++++++.+||+|||.+.......
T Consensus 92 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYC---HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 778888776654 589999999999999999999 88999999999999999999999999999998664332
Q ss_pred ceeeeeccccCcccCCcCccCCCCC-CccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRV-CTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
. .....||+.|+|||.+.+..+ ++++||||+|+++|||++|+.||...... . ....+.....
T Consensus 167 ~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~------------~~~~~~~~~~ 229 (275)
T 2eue_A 167 F---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--V------------LFKNISNGVY 229 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--H------------HHHHHHHTCC
T ss_pred c---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--H------------HHHHHHhCCC
Confidence 2 234468999999999877765 78999999999999999999999752111 0 0011111110
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..+. .....+.+++.+|++.|| ++|||++|+++
T Consensus 230 ~~~~-------~~~~~~~~li~~~l~~dP-~~Rps~~e~l~ 262 (275)
T 2eue_A 230 TLPK-------FLSPGAAGLIKRMLIVNP-LNRISIHEIMQ 262 (275)
T ss_dssp CCCT-------TSCHHHHHHHHHHSCSSG-GGSCCHHHHTT
T ss_pred CCCc-------cCCHHHHHHHHHHhhcCH-hHCCCHHHHhh
Confidence 1111 122447889999999999 99999999976
No 164
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=342.45 Aligned_cols=254 Identities=22% Similarity=0.368 Sum_probs=204.8
Q ss_pred hcCCCcCC-eeecccceEEEEEEec---CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 616 TDRFSENN-LIGIGSFGSIYVARLQ---DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~-~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
.++|.+.+ .||+|+||.||+|.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 34666666 9999999999999754 57889999997643 34567889999999999999999999999 4556899
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
||||+++++|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+......
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHH---HHCCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 9999999999999987766799999999999999999999 8899999999999999999999999999999877543
Q ss_pred Ccee-eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 771 DQLS-IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 771 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
.... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ... ..+...
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~------------~~i~~~ 229 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVM------------AFIEQG 229 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHH------------HHHHTT
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHH------------HHHhcC
Confidence 3221 1223356889999999888889999999999999999998 99999753211 111 111111
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
.....+ ..+..++.+++.+||+.|| ++||+++|+++.|+
T Consensus 230 ~~~~~~------~~~~~~l~~li~~~l~~~p-~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 230 KRMECP------PECPPELYALMSDCWIYKW-EDRPDFLTVEQRMR 268 (287)
T ss_dssp CCCCCC------TTCCHHHHHHHHHTTCSSG-GGSCCHHHHHHHHH
T ss_pred CcCCCC------CCcCHHHHHHHHHHcCCCh-hhCcCHHHHHHHHH
Confidence 000000 1223458899999999999 99999999999875
No 165
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=348.55 Aligned_cols=254 Identities=25% Similarity=0.441 Sum_probs=198.8
Q ss_pred cCCCcCCeeecccceEEEEEEecC-----CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQD-----GMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
++|+..+.||+|+||.||+|+... +..||+|+++... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467778999999999999997652 2459999997543 3445678999999999999999999999999999999
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
||||+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+......
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 9999999999999988766799999999999999999999 7889999999999999999999999999999876533
Q ss_pred Cce-eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 771 DQL-SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 771 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... . ..+.+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~------------~~~~~~~~ 266 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--E------------VMKAINDG 266 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--H------------HHHHHHTT
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--H------------HHHHHHCC
Confidence 221 11223346788999999988899999999999999999999 99999652111 0 11111111
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
...... ..+..++.+++.+||+.|| ++||+++|+++.|+
T Consensus 267 ~~~~~~------~~~~~~l~~li~~~l~~~p-~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 267 FRLPTP------MDCPSAIYQLMMQCWQQER-ARRPKFADIVSILD 305 (333)
T ss_dssp CCCCCC------TTCBHHHHHHHHHHTCSST-TTSCCHHHHHHHHH
T ss_pred CcCCCc------ccCCHHHHHHHHHHcCCCh-hhCcCHHHHHHHHH
Confidence 000000 1223457899999999999 99999999999875
No 166
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.5e-38 Score=338.07 Aligned_cols=247 Identities=21% Similarity=0.322 Sum_probs=200.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE---RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 578999999999999999999876 578899999875432 2356788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~L---H~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 99999999999987654 489999999999999999999 89999999999999999999999999999986543222
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
.....|++.|+|||++.+..++.++||||+|+++|+|++|+.||...... . ....+......
T Consensus 164 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~------------~~~~~~~~~~~ 225 (279)
T 3fdn_A 164 ----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--E------------TYKRISRVEFT 225 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--H------------HHHHHHHTCCC
T ss_pred ----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--H------------HHHHHHhCCCC
Confidence 23456899999999999989999999999999999999999999752111 0 00111100000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
.+. .....+.+++.+|++.|| ++|||++|+++.
T Consensus 226 ~~~-------~~~~~~~~li~~~l~~~p-~~Rps~~e~l~h 258 (279)
T 3fdn_A 226 FPD-------FVTEGARDLISRLLKHNP-SQRPMLREVLEH 258 (279)
T ss_dssp CCT-------TSCHHHHHHHHHHCCSSG-GGSCCHHHHHHC
T ss_pred CCC-------cCCHHHHHHHHHHhccCh-hhCCCHHHHhhC
Confidence 010 122457889999999999 999999999863
No 167
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1e-38 Score=351.51 Aligned_cols=247 Identities=25% Similarity=0.334 Sum_probs=199.5
Q ss_pred hcCCCcCCeeecccceEEEEEEe-cCCceEEEEEechh---hHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-QDGMEVAVKVFHQQ---YERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35688999999999999999986 47899999998643 234457789999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||++ |++.+++......+++.++..++.|+++||+|| |++||+||||||+||+++.++.+||+|||++......
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 99997 688888765556799999999999999999999 7889999999999999999999999999999875432
Q ss_pred ceeeeeccccCcccCCcCcc---CCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 772 QLSIQIQTLATIGYMAPEYG---TKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
....||+.|+|||++ ..+.++.++|||||||++|||++|+.||....... ..........+ .
T Consensus 208 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~---------~ 272 (348)
T 1u5q_A 208 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESP---------A 272 (348)
T ss_dssp -----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCC---------C
T ss_pred -----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCC---------C
Confidence 234699999999986 35778999999999999999999999986521110 00011100000 0
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
... ......+.+++.+||+.|| ++|||++|+++.
T Consensus 273 ~~~---------~~~~~~l~~li~~~l~~dP-~~Rps~~~ll~h 306 (348)
T 1u5q_A 273 LQS---------GHWSEYFRNFVDSCLQKIP-QDRPTSEVLLKH 306 (348)
T ss_dssp CCC---------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHTTC
T ss_pred CCC---------CCCCHHHHHHHHHHcccCh-hhCcCHHHHhhC
Confidence 000 0122347889999999999 999999999864
No 168
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.2e-38 Score=339.34 Aligned_cols=251 Identities=19% Similarity=0.268 Sum_probs=201.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH------HHHHHHHHHHHHHHhcCCCccceEeeeecCCCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE------RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 688 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357999999999999999999876 689999999875421 1357789999999999999999999999999999
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC----cEEEeeccCc
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM----VAHISDFGIA 764 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~----~~kL~DFg~a 764 (897)
++||||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++ .+||+|||.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYL---HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 99999999999999987644 589999999999999999999 789999999999999998877 8999999999
Q ss_pred cccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHH
Q 045539 765 KLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEV 844 (897)
Q Consensus 765 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (897)
........ .....|++.|+|||++....++.++||||||+++|+|++|+.||...... ... ..+
T Consensus 160 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~-----------~~~ 223 (283)
T 3bhy_A 160 HKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--ETL-----------TNI 223 (283)
T ss_dssp EECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHH-----------HHH
T ss_pred eeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--HHH-----------HHh
Confidence 87643322 23446899999999999889999999999999999999999999752111 000 000
Q ss_pred hhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 845 IDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 845 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..... ... ..........+.+++.+|++.|| ++|||++|+++
T Consensus 224 ~~~~~-~~~---~~~~~~~~~~~~~li~~~l~~dp-~~Rps~~~~l~ 265 (283)
T 3bhy_A 224 SAVNY-DFD---EEYFSNTSELAKDFIRRLLVKDP-KRRMTIAQSLE 265 (283)
T ss_dssp HTTCC-CCC---HHHHTTCCHHHHHHHHTTSCSSG-GGSCCHHHHHH
T ss_pred Hhccc-CCc---chhcccCCHHHHHHHHHHccCCH-hHCcCHHHHHh
Confidence 00000 000 11112234557899999999999 99999999986
No 169
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.4e-38 Score=344.68 Aligned_cols=251 Identities=22% Similarity=0.284 Sum_probs=201.1
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
..++|.+.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3568999999999999999999876 689999999986554445678899999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee---CCCCcEEEeeccCccccCCC
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll---~~~~~~kL~DFg~a~~~~~~ 770 (897)
|+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||.+......
T Consensus 87 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 87 LVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYL---HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred cCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 999999999887654 589999999999999999999 78999999999999999 78889999999998764322
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
. .....||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ...+.+ ......
T Consensus 163 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i-----------~~~~~~ 225 (304)
T 2jam_A 163 I----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKI-----------KEGYYE 225 (304)
T ss_dssp T----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHH-----------HHCCCC
T ss_pred c----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHH-----------HcCCCC
Confidence 1 22346899999999999999999999999999999999999999752111 111111 110000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
... +.......++.+++.+|++.|| ++|||++|+++
T Consensus 226 ~~~----~~~~~~~~~~~~li~~~l~~dp-~~Rps~~~~l~ 261 (304)
T 2jam_A 226 FES----PFWDDISESAKDFICHLLEKDP-NERYTCEKALS 261 (304)
T ss_dssp CCT----TTTTTSCHHHHHHHHHHHCSST-TTSCCHHHHHT
T ss_pred CCc----cccccCCHHHHHHHHHHcCCCh-hHCcCHHHHhc
Confidence 000 0001223457899999999999 99999999986
No 170
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5e-39 Score=367.17 Aligned_cols=254 Identities=24% Similarity=0.433 Sum_probs=201.5
Q ss_pred HhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
..++|++.+.||+|+||.||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 456899999999999999999999888889999998643 234678999999999999999999999976 678999999
Q ss_pred ccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 695 MPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 695 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
+++|+|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...... .
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~ 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-Y 335 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-e
Confidence 99999999997532 4589999999999999999999 88999999999999999999999999999998765322 1
Q ss_pred eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcch
Q 045539 774 SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRG 852 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 852 (897)
.......++..|+|||.+..+.++.++|||||||++|||++ |+.||...... ...+.+.......
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--------------~~~~~i~~~~~~~ 401 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------------EVLDQVERGYRMP 401 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------------HHHHHHHTTCCCC
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--------------HHHHHHHcCCCCC
Confidence 22233457889999999988899999999999999999999 99998753211 0111111111100
Q ss_pred hhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 853 EERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 853 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.+ ..+...+.+++.+||+.|| ++|||+++|++.|++
T Consensus 402 ~~------~~~~~~l~~li~~cl~~dP-~~Rpt~~~l~~~L~~ 437 (452)
T 1fmk_A 402 CP------PECPESLHDLMCQCWRKEP-EERPTFEYLQAFLED 437 (452)
T ss_dssp CC------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHT
T ss_pred CC------CCCCHHHHHHHHHHccCCh-hhCcCHHHHHHHHHH
Confidence 00 1234567899999999999 999999999998864
No 171
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.7e-38 Score=345.47 Aligned_cols=258 Identities=22% Similarity=0.397 Sum_probs=194.6
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec----CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCccceEeeeecCCC-
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ----DGMEVAVKVFHQQ--YERALKSFEDECEVMKRIRHRNLVKIISSCSNDD- 686 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~- 686 (897)
...++|.+.+.||+|+||.||+|+.. +++.||+|+++.. .....+.+.+|++++++++||||+++++++.+.+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34578999999999999999999754 3457999998754 2445577899999999999999999999997655
Q ss_pred ----ceEEEEEeccCCChhHhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEE
Q 045539 687 ----FKALIMKYMPNGSLENCLYS-----GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAH 757 (897)
Q Consensus 687 ----~~~lv~e~~~~gsL~~~l~~-----~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~k 757 (897)
..++||||+++++|.+++.. ....+++..++.++.|+++||+|| |++||+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCcEE
Confidence 35999999999999999843 235689999999999999999999 889999999999999999999999
Q ss_pred EeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhc
Q 045539 758 ISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDL 836 (897)
Q Consensus 758 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 836 (897)
|+|||++................+++.|+|||...+..++.++||||||+++|||++ |..||...... .....+
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~--- 262 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDYL--- 262 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHH---
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHH---
Confidence 999999987654433333344567889999999988899999999999999999999 88898653211 111111
Q ss_pred CCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 837 LPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 837 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
........+ ..+..++.+++.+||+.|| ++|||++|+++.|++
T Consensus 263 --------~~~~~~~~~-------~~~~~~l~~li~~~l~~dp-~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 263 --------LHGHRLKQP-------EDCLDELYEIMYSCWRTDP-LDRPTFSVLRLQLEK 305 (313)
T ss_dssp --------HTTCCCCCB-------TTCCHHHHHHHHHTTCSSG-GGSCCHHHHHHHHHH
T ss_pred --------HcCCCCCCC-------ccccHHHHHHHHHHcCCCh-hhCcCHHHHHHHHHH
Confidence 111000111 1223457899999999999 999999999998853
No 172
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=342.95 Aligned_cols=268 Identities=22% Similarity=0.261 Sum_probs=199.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 368999999999999999999876 58999999886443 334567889999999999999999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+........
T Consensus 82 e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFC---HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp ECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 9999999998876554 589999999999999999999 889999999999999999999999999999987653322
Q ss_pred eeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhh---cCCchHHHHhhhh
Q 045539 773 LSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIND---LLPVSVMEVIDTN 848 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~ 848 (897)
......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||......+ ....+.. .............
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 158 --YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD--QLYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHTC
T ss_pred --ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhcccccccccccccc
Confidence 2234568999999998765 678999999999999999999999997632211 1111100 0000000100000
Q ss_pred -h-----cchh---hhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 849 -L-----LRGE---ERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 849 -l-----~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
. ...+ .............+.+++.+||+.|| ++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~ell~h 285 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDP-TERLTCEQLLHH 285 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSST-TTSCCHHHHHTS
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCCh-hhcCCHHHHhcC
Confidence 0 0000 00000111234557899999999999 999999999863
No 173
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.6e-38 Score=346.70 Aligned_cols=272 Identities=23% Similarity=0.332 Sum_probs=209.6
Q ss_pred CCHHHHHHHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHh--cCCCccceEeeeecC
Q 045539 607 FSYHELLRATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKR--IRHRNLVKIISSCSN 684 (897)
Q Consensus 607 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~ 684 (897)
.++..-....++|++.+.||+|+||.||+|++. |+.||||++.... .+.+.+|+++++. ++||||+++++++..
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 334444556789999999999999999999885 8999999997543 3566788888888 689999999999987
Q ss_pred CC----ceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCcEeCCCCCCCeeeCCCCc
Q 045539 685 DD----FKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHF-----GHSTPIIHCDLKPSNVLLDEDMV 755 (897)
Q Consensus 685 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~-----~h~~~ivH~Dlkp~NIll~~~~~ 755 (897)
.+ ..++||||+++|+|.+++.... +++.++..++.|++.||+|||. .|++||+||||||+||+++.++.
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSC
T ss_pred cCCccceeEEEEeecCCCcHHHHHhccC--ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCC
Confidence 76 7899999999999999998754 8999999999999999999941 11899999999999999999999
Q ss_pred EEEeeccCccccCCCCcee--eeeccccCcccCCcCccCCC------CCCccchHHHHHHHHHHHHcC----------CC
Q 045539 756 AHISDFGIAKLLSGEDQLS--IQIQTLATIGYMAPEYGTKG------RVCTRGDVYSYGIMLMEMFTK----------KK 817 (897)
Q Consensus 756 ~kL~DFg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~slGvil~elltg----------~~ 817 (897)
+||+|||++.......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 9999999998765443321 12345689999999987765 334789999999999999999 66
Q ss_pred CCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 818 PTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 818 p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
||............+.. .+....+....+.++. ..++...+.+++.+||+.|| ++|||++||++.|+
T Consensus 266 p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dp-~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 266 PYYDLVPSDPSVEEMRK--------VVCEQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANG-AARLTALRIKKTLS 332 (342)
T ss_dssp TTTTTSCSSCCHHHHHH--------HHTTSCCCCCCCGGGG-TSHHHHHHHHHHHHHCCSSG-GGSCCHHHHHHHHH
T ss_pred CccccCcCcccHHHHHH--------HHHHHHhCCCCccccc-chhHHHHHHHHHHHHhccCh-hhCCCHHHHHHHHH
Confidence 77653332222222211 1111112111111111 12445678999999999999 99999999999885
No 174
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=347.66 Aligned_cols=258 Identities=21% Similarity=0.265 Sum_probs=203.1
Q ss_pred hcCCCcCCeeecccceEEEEEEe-cCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeec----CCCceEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-QDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCS----NDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~l 690 (897)
.++|++.+.||+|+||.||+|+. .+|+.||+|++........+.+.+|++++++++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46899999999999999999987 468999999987665666788999999999999999999999986 3457899
Q ss_pred EEEeccCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 691 IMKYMPNGSLENCLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
||||+++++|.+++.. ....+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI---HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999998875 345689999999999999999999 7889999999999999999999999999998764
Q ss_pred CCCCcee-------eeeccccCcccCCcCccCCCC---CCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcC
Q 045539 768 SGEDQLS-------IQIQTLATIGYMAPEYGTKGR---VCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLL 837 (897)
Q Consensus 768 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 837 (897)
....... ......||+.|+|||++.... ++.++||||||+++|||++|+.||................
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-- 262 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-- 262 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC--
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc--
Confidence 3111000 011235799999999876543 6889999999999999999999997633222221111111
Q ss_pred CchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 838 PVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 838 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
....... .....++.+++.+||+.|| ++|||++|+++.|++
T Consensus 263 ----------~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~~ll~~L~~ 303 (317)
T 2buj_A 263 ----------QLSIPQS------PRHSSALWQLLNSMMTVDP-HQRPHIPLLLSQLEA 303 (317)
T ss_dssp ----------C--CCCC------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred ----------cCCCCcc------ccCCHHHHHHHHHHhhcCh-hhCCCHHHHHHHhhh
Confidence 1000000 1123458899999999999 999999999999854
No 175
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=344.25 Aligned_cols=269 Identities=22% Similarity=0.283 Sum_probs=197.9
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-----HHHHHHHHHHHHHHHhcC---CCccceEeeeecCC
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-----ERALKSFEDECEVMKRIR---HRNLVKIISSCSND 685 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 685 (897)
..++|++.+.||+|+||+||+|++. +|+.||+|+++... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4679999999999999999999864 68999999986432 111245567777777765 99999999999765
Q ss_pred C-----ceEEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEe
Q 045539 686 D-----FKALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHIS 759 (897)
Q Consensus 686 ~-----~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~ 759 (897)
. ..++||||++ ++|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL---HANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5799999996 59999987765 3489999999999999999999 88999999999999999999999999
Q ss_pred eccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhc--C
Q 045539 760 DFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDL--L 837 (897)
Q Consensus 760 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~--~ 837 (897)
|||++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ......... .
T Consensus 163 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred eCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 9999987643322 234578999999999988899999999999999999999999997532111 111111000 0
Q ss_pred Cch-HH---HHhhhhhcch-hhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 838 PVS-VM---EVIDTNLLRG-EERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 838 ~~~-~~---~~i~~~l~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
+.. .. .......... +........+...++.+++.+|++.|| ++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~R~t~~e~l~h 297 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNP-HKRISAFRALQH 297 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSST-TTSCCHHHHHTS
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCC-ccCCCHHHHhcC
Confidence 000 00 0000000000 000001111234567899999999999 999999999863
No 176
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-38 Score=377.65 Aligned_cols=370 Identities=18% Similarity=0.180 Sum_probs=215.2
Q ss_pred cCCCCCCCCcc----eeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEe
Q 045539 55 RNWTSSTSVCS----WIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLY 130 (897)
Q Consensus 55 ~~w~~~~~~c~----w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 130 (897)
++|..+.+||. |.++.|+. ++ +-..... ..+..-..+++++.|++++|.+++..+..|.++++|++|+
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~---~i---~~~~~~~--~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~ 81 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDV---HI---DMQTQDV--YFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLN 81 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSC---EE---CSSCCCC--EESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEE
T ss_pred cCCCCCCcCcccCcCceeEecCc---ee---ccccccc--ccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEE
Confidence 48988888874 76666642 11 1111111 1111122467788888888888755555677888888888
Q ss_pred ccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccc
Q 045539 131 FSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSG 210 (897)
Q Consensus 131 Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 210 (897)
|++|.+.+.++..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++++++..|.++++|++|+|++|.++
T Consensus 82 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~- 160 (597)
T 3oja_B 82 LNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE- 160 (597)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-
T ss_pred CCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCC-
Confidence 8888887777777777777777777777777666666666666666666666666555555555555555555555554
Q ss_pred cCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccC
Q 045539 211 SLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCK 290 (897)
Q Consensus 211 ~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~ 290 (897)
+..|..|.++++|++|+|++|.+++.. +..++
T Consensus 161 ------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~------------------------~~~l~ 192 (597)
T 3oja_B 161 ------------------------RIEDDTFQATTSLQNLQLSSNRLTHVD------------------------LSLIP 192 (597)
T ss_dssp ------------------------BCCTTTTTTCTTCCEEECTTSCCSBCC------------------------GGGCT
T ss_pred ------------------------CCChhhhhcCCcCcEEECcCCCCCCcC------------------------hhhhh
Confidence 444445555556666666666555432 13345
Q ss_pred CCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcc
Q 045539 291 KLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGL 370 (897)
Q Consensus 291 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 370 (897)
+|+.|++++|.+++. ...++|+.|++++|.++...+. + .++|+.|+|
T Consensus 193 ~L~~L~l~~n~l~~l------------------------------~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L 239 (597)
T 3oja_B 193 SLFHANVSYNLLSTL------------------------------AIPIAVEELDASHNSINVVRGP-V--NVELTILKL 239 (597)
T ss_dssp TCSEEECCSSCCSEE------------------------------ECCTTCSEEECCSSCCCEEECS-C--CSCCCEEEC
T ss_pred hhhhhhcccCccccc------------------------------cCCchhheeeccCCcccccccc-c--CCCCCEEEC
Confidence 666666666655421 1223566666666666542221 1 134455555
Q ss_pred cCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCccccc
Q 045539 371 TRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVL 450 (897)
Q Consensus 371 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l 450 (897)
++|++++ +..+..+++|++|+|++|.+++.+|..|+++++|+.|+|++|.+++ +
T Consensus 240 ~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l----------------------- 293 (597)
T 3oja_B 240 QHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-L----------------------- 293 (597)
T ss_dssp CSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-E-----------------------
T ss_pred CCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-C-----------------------
Confidence 5555443 2334445555555555555555445555555555555555555443 2
Q ss_pred ceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCC
Q 045539 451 IGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFN 530 (897)
Q Consensus 451 ~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 530 (897)
|..++.+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++. | +..+++|+.|+|++|
T Consensus 294 --------------~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N 355 (597)
T 3oja_B 294 --------------NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHN 355 (597)
T ss_dssp --------------ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSS
T ss_pred --------------CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCC
Confidence 333444556666666666666 4566666667777777777777643 2 455667777777777
Q ss_pred cccccCCCCCCCCCCCcccccchhhhhhh
Q 045539 531 KLEGEIPRGGPFANLTAKSFMGNELLKML 559 (897)
Q Consensus 531 ~l~~~~p~~~~~~~~~~~~~~~N~~~c~~ 559 (897)
++++..+. ..+..+....+.+++..|+.
T Consensus 356 ~~~~~~~~-~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 356 DWDCNSLR-ALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp CEEHHHHH-HHTTTCCTTTBCCCCCCCCT
T ss_pred CCCChhHH-HHHHHHhhhccccccccCCc
Confidence 77654322 23445555566777777754
No 177
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-38 Score=357.23 Aligned_cols=372 Identities=17% Similarity=0.158 Sum_probs=202.6
Q ss_pred cCCCCCCCCcc-eeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccC
Q 045539 55 RNWTSSTSVCS-WIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSD 133 (897)
Q Consensus 55 ~~w~~~~~~c~-w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 133 (897)
++|..+.+||. |.+..|.....+ +............-..++++++|++++|.++...+..|.++++|++|+|++
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~-----i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~ 78 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVH-----IDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLND 78 (390)
T ss_dssp ---CCEECBCC------EEEESCE-----ECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTT
T ss_pred CCCCCccceehhhhhhccceeeee-----eecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCC
Confidence 38988888875 555555422212 222222222222233568888888888888754444578888888888888
Q ss_pred ccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCC
Q 045539 134 NQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLP 213 (897)
Q Consensus 134 N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 213 (897)
|++.+..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++.+.+..|.++++|++|++++|+++
T Consensus 79 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~---- 154 (390)
T 3o6n_A 79 LQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE---- 154 (390)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC----
T ss_pred CcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccC----
Confidence 8887777777777777777777777777666666666666666666666666555444555555555555555554
Q ss_pred ccccccccccceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCc
Q 045539 214 SRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLK 293 (897)
Q Consensus 214 ~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~ 293 (897)
+..|..+..+++|++|++++|.+++.. +..+++|+
T Consensus 155 ---------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~------------------------~~~l~~L~ 189 (390)
T 3o6n_A 155 ---------------------RIEDDTFQATTSLQNLQLSSNRLTHVD------------------------LSLIPSLF 189 (390)
T ss_dssp ---------------------BCCTTTTSSCTTCCEEECCSSCCSBCC------------------------GGGCTTCS
T ss_pred ---------------------ccChhhccCCCCCCEEECCCCcCCccc------------------------cccccccc
Confidence 444444555555666666655554331 23345666
Q ss_pred EEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCc
Q 045539 294 VLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRN 373 (897)
Q Consensus 294 ~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 373 (897)
.|++++|.+++. ...++|++|++++|+++.. |.. ..++|+.|++++|
T Consensus 190 ~L~l~~n~l~~~------------------------------~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n 236 (390)
T 3o6n_A 190 HANVSYNLLSTL------------------------------AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHN 236 (390)
T ss_dssp EEECCSSCCSEE------------------------------ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSS
T ss_pred eeeccccccccc------------------------------CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCC
Confidence 666666655421 1223566666666666543 221 1244555555555
Q ss_pred ccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCccccccee
Q 045539 374 KLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGL 453 (897)
Q Consensus 374 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l 453 (897)
++++. ..+..+++|++|+|++|++++..|..|.++++|+.|++++|++++ +|.
T Consensus 237 ~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~------------------------ 289 (390)
T 3o6n_A 237 NLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNL------------------------ 289 (390)
T ss_dssp CCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EEC------------------------
T ss_pred CCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCc------------------------
Confidence 55432 344455555555555555555555555555555555555555543 222
Q ss_pred ecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCccc
Q 045539 454 NFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLE 533 (897)
Q Consensus 454 ~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 533 (897)
.+..+++|++|++++|+++ .+|..+..+++|+.|+|++|+|++ +| +..+++|+.|++++|+++
T Consensus 290 -------------~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 290 -------------YGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp -------------SSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEE
T ss_pred -------------ccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCcc
Confidence 2334445555555555555 344445555555666666665552 22 445555666666666655
Q ss_pred ccCCCCCCCCCCCcccccchhhhhh
Q 045539 534 GEIPRGGPFANLTAKSFMGNELLKM 558 (897)
Q Consensus 534 ~~~p~~~~~~~~~~~~~~~N~~~c~ 558 (897)
+.-.. ..+..+....+.+++..|.
T Consensus 353 ~~~~~-~~~~~~~~~~~~~~~~~c~ 376 (390)
T 3o6n_A 353 CNSLR-ALFRNVARPAVDDADQHCK 376 (390)
T ss_dssp HHHHH-HHTTTCCTTTBCCCCSCCC
T ss_pred chhHH-HHHHHHHhhcccccCceec
Confidence 43111 1223333344555555554
No 178
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.5e-39 Score=352.56 Aligned_cols=272 Identities=24% Similarity=0.289 Sum_probs=194.9
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeee-----cCCCceEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSC-----SNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-----~~~~~~~l 690 (897)
.++|++.+.||+|+||.||+|+. +++.||||++....... ...+.|+..+..++||||+++++++ ......++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN-FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhh-HHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 46899999999999999999987 48999999997553321 1223344444558899999999744 33446789
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC---------CcEeCCCCCCCeeeCCCCcEEEeec
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST---------PIIHCDLKPSNVLLDEDMVAHISDF 761 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~---------~ivH~Dlkp~NIll~~~~~~kL~DF 761 (897)
||||+++|+|.+++.... .++..+..++.|++.||+|| |+. ||+||||||+||+++.++.+||+||
T Consensus 90 v~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~L---H~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYL---HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp EECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHH---HCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred EEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHH---HhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 999999999999997765 58899999999999999999 666 9999999999999999999999999
Q ss_pred cCccccCCCCc------eeeeeccccCcccCCcCccCC-------CCCCccchHHHHHHHHHHHHcCCCCCcccccCccc
Q 045539 762 GIAKLLSGEDQ------LSIQIQTLATIGYMAPEYGTK-------GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELS 828 (897)
Q Consensus 762 g~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~ 828 (897)
|+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||.........
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 99987653221 112234469999999998876 45678999999999999999998776442211111
Q ss_pred hhHHhh--hcCCc--hHHHHhh-hhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 829 LNRWIN--DLLPV--SVMEVID-TNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 829 ~~~~~~--~~~~~--~~~~~i~-~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
...+.. ...+. .....+. .......+...........++.+++.+||+.|| ++|||++|++++|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP-~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDA-EARLTAQXAEERMAE 315 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSG-GGSCCHHHHHHHHHH
T ss_pred HHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCCh-hhCcchHHHHHHHHH
Confidence 001100 00010 0111111 111111111111112345568999999999999 999999999998853
No 179
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2e-38 Score=341.95 Aligned_cols=262 Identities=21% Similarity=0.264 Sum_probs=201.6
Q ss_pred HHhcCCCcCCeeecccceEEEEEEe-cCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeee-cCCCceEEE
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARL-QDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSC-SNDDFKALI 691 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv 691 (897)
...++|++.+.||+|+||.||+|+. .+++.||+|++..... .+.+.+|++++++++|++++..++++ .+++..++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 3467999999999999999999986 4689999998764432 24578899999999988777666655 677788999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee---CCCCcEEEeeccCccccC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll---~~~~~~kL~DFg~a~~~~ 768 (897)
|||+ +++|.+++......+++.++..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||++....
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999 9999999986666799999999999999999999 88999999999999999 788999999999998765
Q ss_pred CCCce-----eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHH
Q 045539 769 GEDQL-----SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVME 843 (897)
Q Consensus 769 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (897)
..... .......||+.|+|||...+..++.++|||||||++|||++|+.||......... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----------~~~~~ 229 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR----------QKYER 229 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS----------SHHHH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh----------hhhhh
Confidence 43321 1223456899999999999999999999999999999999999999763222110 01111
Q ss_pred HhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 844 VIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 844 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
+.........+ ........++.+++.+||+.|| ++|||++||++.|++
T Consensus 230 ~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p-~~Rpt~~~l~~~l~~ 277 (296)
T 4hgt_A 230 ISEKKMSTPIE---VLCKGYPSEFATYLNFCRSLRF-DDKPDYSYLRQLFRN 277 (296)
T ss_dssp HHHHHHHSCHH---HHTTTSCHHHHHHHHHHHTSCT-TCCCCHHHHHHHHHH
T ss_pred hhcccccchhh---hhhccCCHHHHHHHHHHHhcCC-CCCCCHHHHHHHHHH
Confidence 11111111110 0001223568899999999999 999999999998753
No 180
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2e-38 Score=342.35 Aligned_cols=256 Identities=22% Similarity=0.381 Sum_probs=200.5
Q ss_pred hcCCCcCCeeecccceEEEEEEecC----CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeee-cCCCceE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQD----GMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSC-SNDDFKA 689 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~ 689 (897)
..+|++.+.||+|+||.||+|++.+ +..||+|++.... ....+.+.+|++++++++||||+++++++ ..++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3578889999999999999998642 2358999987533 34567889999999999999999999985 5566889
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
+||||+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+.....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999988777789999999999999999999 889999999999999999999999999999987653
Q ss_pred CCc--eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcC-CCCCcccccCccchhHHhhhcCCchHHHHhh
Q 045539 770 EDQ--LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTK-KKPTDEIFIGELSLNRWINDLLPVSVMEVID 846 (897)
Q Consensus 770 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 846 (897)
... ........+|+.|+|||...+..++.++||||+|+++|||++| ..||...... .....+ ..
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~-----------~~ 247 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL-----------LQ 247 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHH-----------HT
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHH-----------hc
Confidence 322 1223344678899999999888999999999999999999995 5555442111 111111 11
Q ss_pred hhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 847 TNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 847 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
......+. .+..++.+++.+||+.|| ++|||++|++++|++
T Consensus 248 ~~~~~~~~-------~~~~~l~~li~~~l~~~p-~~Rps~~ell~~L~~ 288 (298)
T 3f66_A 248 GRRLLQPE-------YCPDPLYEVMLKCWHPKA-EMRPSFSELVSRISA 288 (298)
T ss_dssp TCCCCCCT-------TCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred CCCCCCCc-------cCCHHHHHHHHHHcCCCh-hhCcCHHHHHHHHHH
Confidence 00000010 122457899999999999 999999999998863
No 181
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-38 Score=341.54 Aligned_cols=250 Identities=23% Similarity=0.335 Sum_probs=196.4
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 468999999999999999999875 68999999987654 2345788999999999999999999999999999999999
Q ss_pred eccCCChhHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee---CCCCcEEEeeccCcccc
Q 045539 694 YMPNGSLENCLYSG---TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLL 767 (897)
Q Consensus 694 ~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll---~~~~~~kL~DFg~a~~~ 767 (897)
|+++++|.+++... ...+++..+..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF---HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988543 25689999999999999999999 88999999999999999 45678999999999865
Q ss_pred CCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhh
Q 045539 768 SGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDT 847 (897)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 847 (897)
.... ......||+.|+|||++. +.++.++||||||+++|||++|+.||......+ ......... .
T Consensus 178 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~~~~~---------~ 242 (285)
T 3is5_A 178 KSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKATYKE---------P 242 (285)
T ss_dssp ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCC---------C
T ss_pred CCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhhccCC---------c
Confidence 4332 223456899999999875 568899999999999999999999997632110 000000000 0
Q ss_pred hhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 848 NLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 848 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..... ......++.+++.+|++.|| ++|||++|+++
T Consensus 243 ~~~~~-------~~~~~~~~~~li~~~L~~dP-~~Rps~~e~l~ 278 (285)
T 3is5_A 243 NYAVE-------CRPLTPQAVDLLKQMLTKDP-ERRPSAAQVLH 278 (285)
T ss_dssp CCCC---------CCCCHHHHHHHHHHTCSCT-TTSCCHHHHHT
T ss_pred ccccc-------cCcCCHHHHHHHHHHccCCh-hhCcCHHHHhc
Confidence 00000 00122457889999999999 99999999986
No 182
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=351.24 Aligned_cols=266 Identities=18% Similarity=0.258 Sum_probs=196.3
Q ss_pred cCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHH-HHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEe
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYER-ALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
++|++.+.||+|+||.||+|+.. +++.||+|+++..... ....+.+|++++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57999999999999999999876 6899999998754322 122455799999999999999999999999999999999
Q ss_pred ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCcee
Q 045539 695 MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 774 (897)
Q Consensus 695 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~ 774 (897)
++ ++|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC---HRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--c
Confidence 97 589999888777799999999999999999999 88999999999999999999999999999998654322 2
Q ss_pred eeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhc----CCchHHHHhhh--
Q 045539 775 IQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDL----LPVSVMEVIDT-- 847 (897)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~-- 847 (897)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+... .+.........
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHhchhhhcchh
Confidence 2234568999999998766 56899999999999999999999999763211 111111100 00000000000
Q ss_pred ----hhcc-hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 848 ----NLLR-GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 848 ----~l~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.... ..............++.+++.+|++.|| ++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEG-RNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSG-GGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCc-ccCCCHHHHhc
Confidence 0000 0000011112234567899999999999 99999999976
No 183
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.1e-38 Score=359.80 Aligned_cols=265 Identities=21% Similarity=0.198 Sum_probs=195.5
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCccceEeeeecCC------C
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQ--YERALKSFEDECEVMKRIRHRNLVKIISSCSND------D 686 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 686 (897)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 578999999999999999999865 6899999999754 234567888999999999999999999999654 3
Q ss_pred ceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 687 FKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 687 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
..|+||||++++ +.+.+.. .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~---~l~~~~~~~~~~qil~aL~~l---H~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS---CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCCC-HHHHHhh---cCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 569999999764 6555543 388999999999999999999 888999999999999999999999999999987
Q ss_pred cCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhh----------c
Q 045539 767 LSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIND----------L 836 (897)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~----------~ 836 (897)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+...+.. .
T Consensus 214 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 214 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp ---CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHTT
T ss_pred cCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHH
Confidence 64332 233457999999999999999999999999999999999999999753111 011111110 0
Q ss_pred CCchHHHHhhhhhcc---hhh---------hhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 837 LPVSVMEVIDTNLLR---GEE---------RFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 837 ~~~~~~~~i~~~l~~---~~~---------~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
........+...... ..+ ...........++.+++.+|++.|| ++|||++|+++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP-~~R~ta~e~L~H 356 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP-AKRISVDDALQH 356 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSST-TTSCCHHHHHTS
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCCh-hhCCCHHHHhcC
Confidence 000111111100000 000 0001112234568999999999999 999999999863
No 184
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.4e-38 Score=357.87 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=193.7
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--------HHHHHHHHHHHHHHHhcCCCccceEeeeecC
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--------ERALKSFEDECEVMKRIRHRNLVKIISSCSN 684 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 684 (897)
...++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34679999999999999999999865 58999999987542 1122357899999999999999999999865
Q ss_pred CCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC---cEEEeec
Q 045539 685 DDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM---VAHISDF 761 (897)
Q Consensus 685 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~---~~kL~DF 761 (897)
+ ..|+||||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++ .+||+||
T Consensus 212 ~-~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 E-DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp S-EEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred C-ceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecCCCcceEEEeec
Confidence 4 5789999999999999887654 589999999999999999999 788999999999999997544 5999999
Q ss_pred cCccccCCCCceeeeeccccCcccCCcCccC---CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCC
Q 045539 762 GIAKLLSGEDQLSIQIQTLATIGYMAPEYGT---KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLP 838 (897)
Q Consensus 762 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 838 (897)
|+++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||....... .....+
T Consensus 287 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i----- 357 (419)
T 3i6u_A 287 GHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQI----- 357 (419)
T ss_dssp STTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHH-----
T ss_pred ccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHH-----
Confidence 9998765322 223457999999999875 3677889999999999999999999997632221 111111
Q ss_pred chHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 839 VSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 839 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
....... ..........++.+++.+|++.|| ++|||++|+++.
T Consensus 358 -------~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP-~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 -------TSGKYNF---IPEVWAEVSEKALDLVKKLLVVDP-KARFTTEEALRH 400 (419)
T ss_dssp -------HTTCCCC---CHHHHTTSCHHHHHHHHHHSCSST-TTSCCHHHHHHS
T ss_pred -------hcCCCCC---CchhhcccCHHHHHHHHHHccCCh-hHCcCHHHHhCC
Confidence 1110000 011112334568899999999999 999999999863
No 185
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.6e-38 Score=356.44 Aligned_cols=346 Identities=17% Similarity=0.180 Sum_probs=271.2
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEe
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDL 155 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 155 (897)
.++..|+++++++++. | .++.+++|++|+|++|++++ +| ++++++|++|+|++|++.+. + +.++++|++|+|
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 3688999999999974 5 79999999999999999996 44 99999999999999999886 3 899999999999
Q ss_pred eecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccc
Q 045539 156 SINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYG 235 (897)
Q Consensus 156 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~ 235 (897)
++|++++ +| ++.+++|++|++++|+++++ + ++++++|++|++++|+..+.++ +..+++|++|++++|++++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc---cccCCcCCEEECCCCccce
Confidence 9999996 55 99999999999999999997 3 8899999999999997666764 3478999999999999997
Q ss_pred cccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchH
Q 045539 236 TVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSL 315 (897)
Q Consensus 236 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 315 (897)
+| +..+++|+.|++++|.+++. + +..+++|++|++++|+++++ | +..++
T Consensus 185 -l~--l~~l~~L~~L~l~~N~l~~~-~-----------------------l~~l~~L~~L~Ls~N~l~~i-p--~~~l~- 233 (457)
T 3bz5_A 185 -LD--VSQNKLLNRLNCDTNNITKL-D-----------------------LNQNIQLTFLDCSSNKLTEI-D--VTPLT- 233 (457)
T ss_dssp -CC--CTTCTTCCEEECCSSCCSCC-C-----------------------CTTCTTCSEEECCSSCCSCC-C--CTTCT-
T ss_pred -ec--cccCCCCCEEECcCCcCCee-c-----------------------cccCCCCCEEECcCCccccc-C--ccccC-
Confidence 44 88999999999999999865 1 46789999999999999984 5 66666
Q ss_pred HHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhccccccccccc
Q 045539 316 SLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQ 395 (897)
Q Consensus 316 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 395 (897)
+|+.|++++|++++..+ +.+++|+.|++++|+ |+.|++++|++.+.+| +..+++|+.|+++
T Consensus 234 ~L~~L~l~~N~l~~~~~---~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls 294 (457)
T 3bz5_A 234 QLTYFDCSVNPLTELDV---STLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVT 294 (457)
T ss_dssp TCSEEECCSSCCSCCCC---TTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCT
T ss_pred CCCEEEeeCCcCCCcCH---HHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECC
Confidence 89999999999998754 455666666666553 3344555555554444 2344555555555
Q ss_pred ccccccCCCc--------ccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCccc
Q 045539 396 GNKFSGSIPS--------CLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPIT 467 (897)
Q Consensus 396 ~N~l~~~~p~--------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~ 467 (897)
+|++.+.+|. .++++++|+.|++++|++++. + +..+++|+.|++++|++ ++
T Consensus 295 ~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l-------------~~----- 353 (457)
T 3bz5_A 295 HNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHI-------------QD----- 353 (457)
T ss_dssp TCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCC-------------CB-----
T ss_pred CCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCC-------------CC-----
Confidence 5554444432 134447899999999999984 3 78888888655555544 43
Q ss_pred ccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhh
Q 045539 468 IGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQ 517 (897)
Q Consensus 468 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 517 (897)
++.|..|++++|+++|. +++..|+.+++++|+++|.+|..+.
T Consensus 354 ---l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 354 ---FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp ---CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCB
T ss_pred ---ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHh
Confidence 24567777888888775 3566777788888888888876543
No 186
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.9e-39 Score=353.78 Aligned_cols=252 Identities=21% Similarity=0.298 Sum_probs=198.8
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 692 (897)
..++|++.+.||+|+||.||+|+.. +|+.||+|++.+... ...+|++++.++ +||||+++++++.+++..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4578999999999999999999876 689999999976532 234688888888 6999999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCC----CcEEEeeccCccccC
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDED----MVAHISDFGIAKLLS 768 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~----~~~kL~DFg~a~~~~ 768 (897)
||+++|+|.+++.... .+++.++..++.||+.||+|| |++||+||||||+||++.++ +.+||+|||+++...
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~l---H~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYL---HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999987654 589999999999999999999 88999999999999998533 359999999998765
Q ss_pred CCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 769 GEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... . ..+++...
T Consensus 172 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~------------~~~~~~~i 235 (342)
T 2qr7_A 172 AENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--T------------PEEILARI 235 (342)
T ss_dssp CTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--C------------HHHHHHHH
T ss_pred CCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--C------------HHHHHHHH
Confidence 4322 223457899999999988878899999999999999999999999752111 1 11111111
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
....+............++.+++.+|++.|| ++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP-~~R~t~~~il~ 277 (342)
T 2qr7_A 236 GSGKFSLSGGYWNSVSDTAKDLVSKMLHVDP-HQRLTAALVLR 277 (342)
T ss_dssp HHCCCCCCSTTTTTSCHHHHHHHHHHTCSST-TTSCCHHHHTT
T ss_pred ccCCcccCccccccCCHHHHHHHHHHCCCCh-hHCcCHHHHhc
Confidence 1110000000001223457899999999999 99999999876
No 187
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=351.61 Aligned_cols=248 Identities=16% Similarity=0.135 Sum_probs=199.3
Q ss_pred HhcCCCcCCeeecccceEEEEEE------ecCCceEEEEEechhhHHHHHHHHHHHHHHHhcC---CCccceEeeeecCC
Q 045539 615 ATDRFSENNLIGIGSFGSIYVAR------LQDGMEVAVKVFHQQYERALKSFEDECEVMKRIR---HRNLVKIISSCSND 685 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 685 (897)
..++|.+.+.||+|+||.||+|. ..+++.||+|+++... ...+.+|++++++++ |+||+++++++..+
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 45789999999999999999994 3468999999997653 345677888888887 99999999999999
Q ss_pred CceEEEEEeccCCChhHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC---------
Q 045539 686 DFKALIMKYMPNGSLENCLYS----GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE--------- 752 (897)
Q Consensus 686 ~~~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~--------- 752 (897)
+..|+||||+++|+|.+++.. ....+++..+..++.|++.||+|| |++||+||||||+||+++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l---H~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV---HDCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999874 335699999999999999999999 8899999999999999998
Q ss_pred --CCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchh
Q 045539 753 --DMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLN 830 (897)
Q Consensus 753 --~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~ 830 (897)
++.+||+|||+|+.+.............||+.|+|||++.+..++.++|||||||++|||+||+.||.....+....
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~- 295 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKP- 295 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEE-
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceee-
Confidence 89999999999976543333344456679999999999999999999999999999999999999996543221110
Q ss_pred HHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCC-CCHHHHHhhcC
Q 045539 831 RWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNG-ADMGWIFSALD 894 (897)
Q Consensus 831 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~R-Pt~~evl~~L~ 894 (897)
.......+ ....+.+++..|++.+| .+| |+++++.+.|+
T Consensus 296 ---------------~~~~~~~~---------~~~~~~~~~~~~l~~~p-~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 296 ---------------EGLFRRLP---------HLDMWNEFFHVMLNIPD-CHHLPSLDLLRQKLK 335 (365)
T ss_dssp ---------------CSCCTTCS---------SHHHHHHHHHHHHCCCC-TTCCCCHHHHHHHHH
T ss_pred ---------------chhccccC---------cHHHHHHHHHHHcCCCC-CCcchHHHHHHHHHH
Confidence 00000001 01235677888999999 777 57777766654
No 188
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.7e-38 Score=361.52 Aligned_cols=195 Identities=24% Similarity=0.389 Sum_probs=155.5
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecC-----CCc
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSN-----DDF 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 687 (897)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ....+++.+|++++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 478999999999999999999865 68999999986532 3455788999999999999999999999843 357
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
.|+||||+ +++|.+++.... .+++..+..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYV---HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHH---HhCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 578998887654 589999999999999999999 8899999999999999999999999999999876
Q ss_pred CCCCce-------------------------eeeeccccCcccCCcCcc-CCCCCCccchHHHHHHHHHHHHcC
Q 045539 768 SGEDQL-------------------------SIQIQTLATIGYMAPEYG-TKGRVCTRGDVYSYGIMLMEMFTK 815 (897)
Q Consensus 768 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDv~slGvil~elltg 815 (897)
...... ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 422210 123445789999999975 566799999999999999999994
No 189
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-38 Score=341.74 Aligned_cols=255 Identities=20% Similarity=0.331 Sum_probs=201.4
Q ss_pred CCCcCCeeecccceEEEEEEecC----CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCce-EEE
Q 045539 618 RFSENNLIGIGSFGSIYVARLQD----GMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFK-ALI 691 (897)
Q Consensus 618 ~y~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 691 (897)
.|...+.||+|+||+||+|++.+ +..||+|++.... ....+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 55667899999999999998542 2369999987543 34567889999999999999999999999776655 999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+.+++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999988777789999999999999999999 78899999999999999999999999999998654322
Q ss_pred c--eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhh
Q 045539 772 Q--LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNL 849 (897)
Q Consensus 772 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 849 (897)
. ........+++.|+|||...+..++.++||||||+++|+|++|..|+...... .... ..+....
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~------------~~~~~~~ 245 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLT------------HFLAQGR 245 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHH------------HHHHTTC
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHH------------HHhhcCC
Confidence 1 11223446789999999999999999999999999999999966665432111 1111 1111111
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
....+ ......+.+++.+|++.|| ++|||++|++++|++
T Consensus 246 ~~~~~------~~~~~~l~~li~~~l~~~p-~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 246 RLPQP------EYCPDSLYQVMQQCWEADP-AVRPTFRVLVGEVEQ 284 (298)
T ss_dssp CCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred CCCCC------ccchHHHHHHHHHHccCCh-hhCcCHHHHHHHHHH
Confidence 10000 0122457899999999999 999999999998853
No 190
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.6e-38 Score=356.68 Aligned_cols=251 Identities=18% Similarity=0.228 Sum_probs=191.1
Q ss_pred hcCCCcC-CeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHh-cCCCccceEeeeecC----CCce
Q 045539 616 TDRFSEN-NLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKR-IRHRNLVKIISSCSN----DDFK 688 (897)
Q Consensus 616 ~~~y~~~-~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~ 688 (897)
.++|.+. +.||+|+||.||+|++. +|+.||||+++.. ..+.+|++++.+ .+||||+++++++.. ++..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 4567766 68999999999999876 6899999998743 356678888754 479999999998865 5678
Q ss_pred EEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC---CCcEEEeeccCc
Q 045539 689 ALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE---DMVAHISDFGIA 764 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~---~~~~kL~DFg~a 764 (897)
|+||||+++|+|.+++.... ..+++.++..++.||+.||+|| |++||+||||||+||+++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 99999999999999998754 4689999999999999999999 7899999999999999997 789999999999
Q ss_pred cccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHH-
Q 045539 765 KLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVME- 843 (897)
Q Consensus 765 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 843 (897)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....
T Consensus 212 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----------~~~~~~ 278 (400)
T 1nxk_A 212 KETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------PGMKTR 278 (400)
T ss_dssp EECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC----------CSHHHH
T ss_pred cccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc----------HHHHHH
Confidence 8654322 223456899999999999999999999999999999999999999763221110 00111
Q ss_pred HhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 844 VIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 844 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
+......... .....+..++.+++.+||+.|| ++|||++|+++.
T Consensus 279 i~~~~~~~~~----~~~~~~s~~~~~li~~~L~~dP-~~Rpt~~eil~h 322 (400)
T 1nxk_A 279 IRMGQYEFPN----PEWSEVSEEVKMLIRNLLKTEP-TQRMTITEFMNH 322 (400)
T ss_dssp HHHTCCCCCT----TTTTTSCHHHHHHHHTTSCSSG-GGSCCHHHHHHS
T ss_pred HHcCcccCCC----cccccCCHHHHHHHHHHCCCCh-hHCcCHHHHhcC
Confidence 1110000000 0011233457899999999999 999999999863
No 191
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=351.48 Aligned_cols=267 Identities=26% Similarity=0.394 Sum_probs=209.6
Q ss_pred hcCCCcCCeeecccceEEEEEEe-----cCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCC--ce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-----QDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDD--FK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~ 688 (897)
.++|++.+.||+|+||.||+|++ .+|+.||+|++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45789999999999999999984 368999999998766666788999999999999999999999986654 78
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
++||||+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++....
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 999999999999999988776799999999999999999999 78999999999999999999999999999998775
Q ss_pred CCCceee-eeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCc-----hHH
Q 045539 769 GEDQLSI-QIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPV-----SVM 842 (897)
Q Consensus 769 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-----~~~ 842 (897)
....... .....++..|+|||.+.+..++.++||||||+++|||++|..|+...... ..+........ .+.
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccchhhhHHHHH
Confidence 4433221 22345678899999988888999999999999999999999997642110 11111110000 011
Q ss_pred HHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 843 EVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 843 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
+.+........ ...+..++.+++.+||+.|| ++|||++||+++|++
T Consensus 274 ~~~~~~~~~~~------~~~~~~~l~~li~~cl~~dP-~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 274 ELLKNNGRLPR------PDGCPDEIYMIMTECWNNNV-NQRPSFRDLALRVDQ 319 (326)
T ss_dssp HHHHTTCCCCC------CTTCCHHHHHHHHHHSCSSG-GGSCCHHHHHHHHHH
T ss_pred HHhhcCCCCCC------CCcccHHHHHHHHHHcCCCh-hhCcCHHHHHHHHHH
Confidence 11111111000 01234568899999999999 999999999998863
No 192
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.6e-38 Score=345.10 Aligned_cols=257 Identities=21% Similarity=0.335 Sum_probs=195.2
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechh---hHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQ---YERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
..++|++.+.||+|+||.||+|... +|+.||+|+++.. .....+.+.+|++++++++||||+++++++.+++..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3568999999999999999999864 6899999998752 24456788999999999999999999999999999999
Q ss_pred EEEeccCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 691 IMKYMPNGSLENCLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
||||+++++|.+++.. ....+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999998864 335689999999999999999999 8899999999999999999999999999999866
Q ss_pred CCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhh
Q 045539 768 SGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDT 847 (897)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 847 (897)
..... ......|++.|+|||++.+..++.++||||||+++|||++|+.||.............+.. .
T Consensus 187 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----------~ 253 (310)
T 2wqm_A 187 SSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ-----------C 253 (310)
T ss_dssp --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHT-----------T
T ss_pred cCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhc-----------c
Confidence 43221 2234468999999999998899999999999999999999999996532111111111100 0
Q ss_pred hhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 848 NLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 848 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
....... .....++.+++.+||+.|| ++|||++||++.|+
T Consensus 254 ~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 254 DYPPLPS------DHYSEELRQLVNMCINPDP-EKRPDVTYVYDVAK 293 (310)
T ss_dssp CSCCCCT------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred cCCCCcc------cccCHHHHHHHHHHcCCCh-hhCCCHHHHHHHHH
Confidence 0000000 1123457899999999999 99999999999875
No 193
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.9e-38 Score=364.88 Aligned_cols=252 Identities=20% Similarity=0.267 Sum_probs=202.0
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
..++|++.+.||+|+||+||+|+.. +++.||||++.+.. ....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3568999999999999999999876 68999999997543 23457788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeC---CCCcEEEeeccCccccC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLD---EDMVAHISDFGIAKLLS 768 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~---~~~~~kL~DFg~a~~~~ 768 (897)
|||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++ .++.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 99999999999887654 589999999999999999999 889999999999999995 45689999999998765
Q ss_pred CCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 769 GEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... +++...
T Consensus 176 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----------------~~~~~i 234 (486)
T 3mwu_A 176 QNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-----------------DILKRV 234 (486)
T ss_dssp CC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----------------HHHHHH
T ss_pred CCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----------------HHHHHH
Confidence 332 2234579999999998765 5899999999999999999999999752111 111111
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
....+....+....+..++.+++.+||+.|| ++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp-~~R~t~~~~l~h 277 (486)
T 3mwu_A 235 ETGKYAFDLPQWRTISDDAKDLIRKMLTFHP-SLRITATQCLEH 277 (486)
T ss_dssp HHTCCCSCSGGGGGSCHHHHHHHHHHTCSST-TTSCCHHHHHHC
T ss_pred HhCCCCCCCcccCCCCHHHHHHHHHHcCCCh-hhCcCHHHHhcC
Confidence 1110000001111233457899999999999 999999999873
No 194
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=6.5e-38 Score=363.51 Aligned_cols=251 Identities=20% Similarity=0.297 Sum_probs=202.2
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH-------------HHHHHHHHHHHHHHhcCCCccceEee
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE-------------RALKSFEDECEVMKRIRHRNLVKIIS 680 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 680 (897)
..++|.+.+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4678999999999999999999876 588999999875421 23567889999999999999999999
Q ss_pred eecCCCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC---cEE
Q 045539 681 SCSNDDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM---VAH 757 (897)
Q Consensus 681 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~---~~k 757 (897)
++.+++..|+||||+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYL---HKHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999887654 589999999999999999999 889999999999999998775 699
Q ss_pred EeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcC
Q 045539 758 ISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLL 837 (897)
Q Consensus 758 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 837 (897)
|+|||++........ .....||+.|+|||++. +.++.++||||+||++|+|++|+.||.....
T Consensus 190 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------------- 252 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND------------- 252 (504)
T ss_dssp ECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------------
T ss_pred EEECCCCEEcCCCCc---cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-------------
Confidence 999999987654322 23456999999999876 4689999999999999999999999976211
Q ss_pred CchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 838 PVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 838 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.+++.......+....+....+..++.+++.+|++.|| ++|||++|+++
T Consensus 253 ----~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp-~~R~t~~e~l~ 301 (504)
T 3q5i_A 253 ----QDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDY-NKRCTAEEALN 301 (504)
T ss_dssp ----HHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSST-TTSCCHHHHHT
T ss_pred ----HHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCCh-hHCCCHHHHhc
Confidence 11111111111111112223344568899999999999 99999999986
No 195
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.6e-39 Score=350.18 Aligned_cols=243 Identities=22% Similarity=0.307 Sum_probs=201.6
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH--------HHHHHHHHHHHHHHhcCCCccceEeeeecCC
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE--------RALKSFEDECEVMKRIRHRNLVKIISSCSND 685 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 685 (897)
..++|++.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.++
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4578999999999999999999865 689999999875421 1234567899999999999999999999999
Q ss_pred CceEEEEEeccCC-ChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCc
Q 045539 686 DFKALIMKYMPNG-SLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIA 764 (897)
Q Consensus 686 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a 764 (897)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYL---RLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999887664 589999999999999999999 8899999999999999999999999999999
Q ss_pred cccCCCCceeeeeccccCcccCCcCccCCCCC-CccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHH
Q 045539 765 KLLSGEDQLSIQIQTLATIGYMAPEYGTKGRV-CTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVME 843 (897)
Q Consensus 765 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (897)
........ .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 178 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------ 236 (335)
T 3dls_A 178 AYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------ 236 (335)
T ss_dssp EECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------------
T ss_pred eECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------------
Confidence 87654332 223569999999999887776 88999999999999999999999752111
Q ss_pred HhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 844 VIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 844 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
......... ....++.+++.+||+.|| ++|||++|+++.
T Consensus 237 -~~~~~~~~~--------~~~~~l~~li~~~L~~dP-~~Rps~~ell~h 275 (335)
T 3dls_A 237 -VEAAIHPPY--------LVSKELMSLVSGLLQPVP-ERRTTLEKLVTD 275 (335)
T ss_dssp -TTTCCCCSS--------CCCHHHHHHHHHHTCSSG-GGSCCHHHHHHC
T ss_pred -HhhccCCCc--------ccCHHHHHHHHHHccCCh-hhCcCHHHHhcC
Confidence 000000000 012347899999999999 999999999874
No 196
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.5e-38 Score=340.05 Aligned_cols=259 Identities=20% Similarity=0.262 Sum_probs=204.2
Q ss_pred hcCCCcCCeeecccceEEEEEEe-cCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeee-cCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-QDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSC-SNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 693 (897)
.++|++.+.||+|+||.||+|+. .+|+.||+|++..... .+.+.+|++++++++|++++..++++ .+++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 57899999999999999999986 4799999999865432 24678999999999988876666555 66778899999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee---CCCCcEEEeeccCccccCCC
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll---~~~~~~kL~DFg~a~~~~~~ 770 (897)
|+ +++|.+++......+++.++..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||.+......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 9999999986666799999999999999999999 88999999999999999 48889999999999876543
Q ss_pred Ccee-----eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHh
Q 045539 771 DQLS-----IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVI 845 (897)
Q Consensus 771 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i 845 (897)
.... ......||+.|+|||+..+..++.++|||||||++|||++|+.||......... .....+.
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----------~~~~~~~ 231 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR----------QKYERIS 231 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS----------SHHHHHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh----------hhhhhhc
Confidence 3211 123456999999999999999999999999999999999999999763221100 0111111
Q ss_pred hhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 846 DTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 846 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
........+ ........++.+++.+||+.|| ++|||++||++.|+
T Consensus 232 ~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp-~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 232 EKKMSTPIE---VLCKGYPSEFATYLNFCRSLRF-DDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHHHSCHH---HHTTTSCHHHHHHHHHHHTSCT-TCCCCHHHHHHHHH
T ss_pred ccccCCchH---HHHhhCCHHHHHHHHHHHhcCc-CcCCCHHHHHHHHH
Confidence 111111110 0001233568899999999999 99999999999885
No 197
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=359.72 Aligned_cols=271 Identities=20% Similarity=0.298 Sum_probs=205.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCC--ceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDD--FKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 691 (897)
.++|.+.+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 468999999999999999999876 58999999997543 234567789999999999999999999997655 77999
Q ss_pred EEeccCCChhHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee----CCCCcEEEeeccCcc
Q 045539 692 MKYMPNGSLENCLYSGT--CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL----DEDMVAHISDFGIAK 765 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll----~~~~~~kL~DFg~a~ 765 (897)
|||+++++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH---HHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999987654 2389999999999999999999 88999999999999999 788889999999998
Q ss_pred ccCCCCceeeeeccccCcccCCcCccCC--------CCCCccchHHHHHHHHHHHHcCCCCCcccccCccc---hhHHhh
Q 045539 766 LLSGEDQLSIQIQTLATIGYMAPEYGTK--------GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELS---LNRWIN 834 (897)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~---~~~~~~ 834 (897)
....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..+...
T Consensus 165 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 165 ELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp ECCCGGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred EccCCCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 7654322 224569999999998654 56788999999999999999999999753221111 111111
Q ss_pred hcCCchHHHHhhhhh------cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 835 DLLPVSVMEVIDTNL------LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 835 ~~~~~~~~~~i~~~l------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
. .+......+.... ....+....-.+.....+.+++.+||+.|| ++|||++|+++.++
T Consensus 242 ~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP-~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 242 G-KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQ-EKCWGFDQFFAETS 305 (396)
T ss_dssp S-CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCT-TTSCCHHHHHHHHH
T ss_pred C-CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccCh-hhhccHHHHHHHHH
Confidence 1 1100000000000 000000000113445668899999999999 99999999988764
No 198
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=363.65 Aligned_cols=346 Identities=20% Similarity=0.188 Sum_probs=196.8
Q ss_pred ceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccc
Q 045539 103 QTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATN 182 (897)
Q Consensus 103 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N 182 (897)
+.++.++++++ .+|..+. ++|++|+|++|++.+..+..|.++++|++|+|++|.++
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~--------------------- 69 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS--------------------- 69 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCC---------------------
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccC---------------------
Confidence 35666666666 5555443 45666666666555544444444444444444444444
Q ss_pred cccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccC
Q 045539 183 NLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIP 262 (897)
Q Consensus 183 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 262 (897)
++.|..|.++++|++|+|++|+++ .+|...+..+++|++|+|++|.+.+..+..|.++++|++|+|++|.+++..+
T Consensus 70 ---~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 145 (477)
T 2id5_A 70 ---AVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH 145 (477)
T ss_dssp ---EECTTTTTTCTTCCEEECCSSCCC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECT
T ss_pred ---EeChhhhhCCccCCEEECCCCcCC-ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeCh
Confidence 444444445555555555555554 3444333344455555555555555555555666666666666665555444
Q ss_pred ccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCc
Q 045539 263 NTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLL 342 (897)
Q Consensus 263 ~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 342 (897)
.. +.++++|++|+|++|+++++ .+..|..+++|+
T Consensus 146 ~~---------------------~~~l~~L~~L~l~~n~l~~~-------------------------~~~~l~~l~~L~ 179 (477)
T 2id5_A 146 RA---------------------FSGLNSLEQLTLEKCNLTSI-------------------------PTEALSHLHGLI 179 (477)
T ss_dssp TS---------------------STTCTTCCEEEEESCCCSSC-------------------------CHHHHTTCTTCC
T ss_pred hh---------------------ccCCCCCCEEECCCCcCccc-------------------------ChhHhcccCCCc
Confidence 32 23444555555555544421 122344555555
Q ss_pred EEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceecccccc
Q 045539 343 VLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNR 422 (897)
Q Consensus 343 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 422 (897)
.|++++|++++..+..|..+++|+.|++ ++|.+.+.+|.......+|+.|++++|+
T Consensus 180 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l------------------------~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 235 (477)
T 2id5_A 180 VLRLRHLNINAIRDYSFKRLYRLKVLEI------------------------SHWPYLDTMTPNCLYGLNLTSLSITHCN 235 (477)
T ss_dssp EEEEESCCCCEECTTCSCSCTTCCEEEE------------------------ECCTTCCEECTTTTTTCCCSEEEEESSC
T ss_pred EEeCCCCcCcEeChhhcccCcccceeeC------------------------CCCccccccCcccccCccccEEECcCCc
Confidence 6666655555544444555555555544 4444444444444444456666666666
Q ss_pred ccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEe
Q 045539 423 FTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLD 502 (897)
Q Consensus 423 l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 502 (897)
+++..+..+..+++|+. |+|++|.+++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+
T Consensus 236 l~~~~~~~~~~l~~L~~-------------L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 302 (477)
T 2id5_A 236 LTAVPYLAVRHLVYLRF-------------LNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLN 302 (477)
T ss_dssp CCSCCHHHHTTCTTCCE-------------EECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEE
T ss_pred ccccCHHHhcCccccCe-------------eECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEE
Confidence 65433345555555553 33333344444456677778888888888888887788888888888888
Q ss_pred ccCCccCCCCchhhhhhcccceEeccCCcccccCCCCCCCCCCCcccccchhhhhhh
Q 045539 503 LSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIPRGGPFANLTAKSFMGNELLKML 559 (897)
Q Consensus 503 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~ 559 (897)
|++|+|++..+..|..+++|+.|+|++|++.+..+....+.......+.++...|..
T Consensus 303 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~ 359 (477)
T 2id5_A 303 VSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCAT 359 (477)
T ss_dssp CCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEE
T ss_pred CCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCC
Confidence 888888876667778888888888888888765432111222233456666666653
No 199
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.6e-38 Score=347.98 Aligned_cols=255 Identities=22% Similarity=0.352 Sum_probs=201.0
Q ss_pred hcCCCcCCeeecccceEEEEEEe------cCCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL------QDGMEVAVKVFHQQ-YERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 688 (897)
.++|++.+.||+|+||.||+|++ .+++.||+|++... .......+.+|+.++++++||||+++++++.+++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 57899999999999999999984 24778999998643 244556788999999999999999999999999999
Q ss_pred EEEEEeccCCChhHhhhcCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC---CCcEEEe
Q 045539 689 ALIMKYMPNGSLENCLYSGT------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE---DMVAHIS 759 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~---~~~~kL~ 759 (897)
|+||||+++++|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHH---hhCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998654 3589999999999999999999 8899999999999999984 4469999
Q ss_pred eccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCC
Q 045539 760 DFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLP 838 (897)
Q Consensus 760 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 838 (897)
|||.+................||+.|+|||++.+..++.++||||||+++|||++ |+.||...... ...+.
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~------ 257 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEF------ 257 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHH------
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHH------
Confidence 9999986644433333345568999999999888889999999999999999998 99998752111 11111
Q ss_pred chHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 839 VSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 839 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
+......... ..+...+.+++.+||+.|| ++|||++|+++.|+
T Consensus 258 ------~~~~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 258 ------VTSGGRMDPP------KNCPGPVYRIMTQCWQHQP-EDRPNFAIILERIE 300 (327)
T ss_dssp ------HHTTCCCCCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred ------HhcCCCCCCC------CCCCHHHHHHHHHHhcCCh-hhCcCHHHHHHHHH
Confidence 1111000000 1123457899999999999 99999999999875
No 200
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.5e-38 Score=364.55 Aligned_cols=248 Identities=21% Similarity=0.283 Sum_probs=201.4
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE---RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|...+.||+|+||.||+|+.. +|+.||+|++.+... ...+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 468899999999999999999876 699999999976532 2346788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 692 MKYMPNGSLENCLYSGT---CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
|||++||+|.+++.... ..+++..+..++.||+.||+|| |++||+||||||+||+++.+|.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~L---H~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL---HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHH---HHcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999987543 4689999999999999999999 88999999999999999999999999999998765
Q ss_pred CCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 769 GEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...... ..+....
T Consensus 341 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~--------~~i~~~~ 409 (543)
T 3c4z_A 341 AGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELK--------QRVLEQA 409 (543)
T ss_dssp TTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHH--------HHHHHCC
T ss_pred CCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHH--------HHHhhcc
Confidence 4322 1234579999999999999999999999999999999999999997632110 111110 0111111
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCH
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADM 886 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~ 886 (897)
. ..+ ......+.+++.+|++.|| ++||++
T Consensus 410 ~-~~p-------~~~s~~~~~li~~lL~~dP-~~R~~~ 438 (543)
T 3c4z_A 410 V-TYP-------DKFSPASKDFCEALLQKDP-EKRLGF 438 (543)
T ss_dssp C-CCC-------TTSCHHHHHHHHHHSCSSG-GGSCCC
T ss_pred c-CCC-------cccCHHHHHHHHHhccCCH-hHCCCC
Confidence 1 011 1223457889999999999 999975
No 201
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=354.32 Aligned_cols=253 Identities=23% Similarity=0.371 Sum_probs=191.8
Q ss_pred CCCcCCeeecccceEEEEEEec--CC--ceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeec-CCCceEEE
Q 045539 618 RFSENNLIGIGSFGSIYVARLQ--DG--MEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCS-NDDFKALI 691 (897)
Q Consensus 618 ~y~~~~~lg~G~~g~Vy~a~~~--~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv 691 (897)
.|...+.||+|+||.||+|++. ++ ..||+|.++... ....+.+.+|+.++++++||||+++++++. .++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 5677889999999999999864 22 458999986432 345678999999999999999999999864 45688999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++++|.+++......+++.++..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 999999999999988777789999999999999999999 88999999999999999999999999999998664332
Q ss_pred ce--eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 772 QL--SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 772 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
.. .......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .....+.. ..
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~-----------~~ 313 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQ-----------GR 313 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHT-----------TC
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHc-----------CC
Confidence 21 12233457889999999988899999999999999999999 67777653211 11111111 00
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
....+ ..+...+.+++.+||+.|| ++|||++|+++.|+
T Consensus 314 ~~~~p-------~~~~~~l~~li~~cl~~dp-~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 314 RLLQP-------EYCPDPLYEVMLKCWHPKA-EMRPSFSELVSRIS 351 (373)
T ss_dssp CCCCC-------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred CCCCC-------CCCCHHHHHHHHHHcCCCh-hhCcCHHHHHHHHH
Confidence 00001 1123457899999999999 99999999999885
No 202
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3e-38 Score=364.53 Aligned_cols=252 Identities=21% Similarity=0.302 Sum_probs=205.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.+.. ......+.+|++++++++||||+++++++.+++..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999875 69999999997653 22346688999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 692 MKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
|||++||+|.+++.... ..+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yL---H~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL---HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987654 4589999999999999999999 7889999999999999999999999999999876543
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ... .+...+...-.
T Consensus 340 ~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~---------~i~~~i~~~~~ 406 (576)
T 2acx_A 340 QT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KRE---------EVERLVKEVPE 406 (576)
T ss_dssp CC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHH---------HHHHHHHHCCC
T ss_pred cc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHH---------HHHHHhhcccc
Confidence 32 234579999999999999899999999999999999999999997632111 000 01111111000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCC-----CHHHHHh
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGA-----DMGWIFS 891 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RP-----t~~evl~ 891 (897)
..+ .....++.+++.+|++.|| ++|| +++||++
T Consensus 407 ~~p-------~~~s~~~~dLI~~lL~~dP-~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 407 EYS-------ERFSPQARSLCSQLLCKDP-AERLGCRGGSAREVKE 444 (576)
T ss_dssp CCC-------TTSCHHHHHHHHHHTCSSG-GGSTTCSSSHHHHHHT
T ss_pred cCC-------ccCCHHHHHHHHHhccCCH-HHcCCCCCCCHHHHHh
Confidence 000 1123457899999999999 9999 7888875
No 203
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.7e-38 Score=362.66 Aligned_cols=248 Identities=22% Similarity=0.267 Sum_probs=194.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|+++++.++||||+++++++.+++..|+|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 468999999999999999999865 68999999998653 23446678899999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS-TPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~-~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~ 770 (897)
|||+++++|.+++.... .+++..+..++.|++.||+|| |+ +||+||||||+||+++.++.+||+|||+|+.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYL---HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---hhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999887654 589999999999999999999 76 89999999999999999999999999999864322
Q ss_pred CceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+ .+.....
T Consensus 303 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~-----------~i~~~~~- 366 (446)
T 4ejn_A 303 G--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFE-----------LILMEEI- 366 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-----------HHHHCCC-
T ss_pred C--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHH-----------HHHhCCC-
Confidence 2 2234567999999999999999999999999999999999999999652111 0000 1111110
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCC-----CHHHHHh
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGA-----DMGWIFS 891 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RP-----t~~evl~ 891 (897)
..+. ....++.+++.+||+.|| ++|| +++|+++
T Consensus 367 ~~p~-------~~~~~~~~li~~~L~~dP-~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 RFPR-------TLGPEAKSLLSGLLKKDP-KQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CCCT-------TSCHHHHHHHHHHTCSST-TTSTTCSTTTHHHHHT
T ss_pred CCCc-------cCCHHHHHHHHHHcccCH-HHhCCCCCCCHHHHHh
Confidence 0010 123457899999999999 9999 9999876
No 204
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.5e-38 Score=342.09 Aligned_cols=255 Identities=22% Similarity=0.339 Sum_probs=201.9
Q ss_pred HhcCCCcCC-eeecccceEEEEEEec---CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCce
Q 045539 615 ATDRFSENN-LIGIGSFGSIYVARLQ---DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 615 ~~~~y~~~~-~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 688 (897)
..++|.+.+ .||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++ +.+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 356788888 9999999999999643 46889999997553 23357889999999999999999999999 55678
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
++||||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++....
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHH---HhCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 99999999999999998754 589999999999999999999 78899999999999999999999999999998765
Q ss_pred CCCcee-eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhh
Q 045539 769 GEDQLS-IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVID 846 (897)
Q Consensus 769 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 846 (897)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .. .+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~------------~~~~~ 234 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EV------------TAMLE 234 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HH------------HHHHH
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HH------------HHHHH
Confidence 443322 1223346788999999888889999999999999999999 99999763211 11 11111
Q ss_pred hhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 847 TNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 847 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.......+ ..+..++.+++.+||+.|| ++|||++||++.|++
T Consensus 235 ~~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 235 KGERMGCP------AGCPREMYDLMNLCWTYDV-ENRPGFAAVELRLRN 276 (291)
T ss_dssp TTCCCCCC------TTCCHHHHHHHHHHTCSST-TTSCCHHHHHHHHHH
T ss_pred cCCCCCCC------CCCCHHHHHHHHHHcCCCh-hhCcCHHHHHHHHHH
Confidence 11000000 1223458899999999999 999999999998863
No 205
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=8.7e-38 Score=336.66 Aligned_cols=249 Identities=19% Similarity=0.273 Sum_probs=204.6
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 468999999999999999999876 58899999987542 34567788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++++|.+++.... .+++.++..++.|+++||+|| |++||+||||||+||+++.++.+||+|||.+.......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999999887643 589999999999999999999 78899999999999999999999999999998764322
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
. ......||+.|+|||+..+..++.++||||||+++|+|++|+.||......+ . ...+..... .
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~--------~~~~~~~~~-~ 233 (294)
T 2rku_A 170 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-----T--------YLRIKKNEY-S 233 (294)
T ss_dssp C--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----H--------HHHHHTTCC-C
T ss_pred c--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----H--------HHHHhhccC-C
Confidence 2 1234568999999999988889999999999999999999999997532110 0 001111000 0
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
.+. .....+.+++.+|++.|| ++|||++|+++.
T Consensus 234 ~~~-------~~~~~~~~li~~~l~~~p-~~Rps~~~ll~~ 266 (294)
T 2rku_A 234 IPK-------HINPVAASLIQKMLQTDP-TARPTINELLND 266 (294)
T ss_dssp CCT-------TSCHHHHHHHHHHTCSSG-GGSCCGGGGGGS
T ss_pred Ccc-------ccCHHHHHHHHHHcccCh-hhCcCHHHHhhC
Confidence 000 122347889999999999 999999999874
No 206
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.4e-38 Score=346.27 Aligned_cols=259 Identities=18% Similarity=0.249 Sum_probs=203.1
Q ss_pred HHHHHHhcCCCcC-CeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcC-CCccceEeeeecC
Q 045539 610 HELLRATDRFSEN-NLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIR-HRNLVKIISSCSN 684 (897)
Q Consensus 610 ~~~~~~~~~y~~~-~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 684 (897)
.......++|.+. +.||+|+||.||+|... +|+.||+|+++... ......+.+|+.++++++ ||||+++++++.+
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3344566788887 89999999999999876 68999999987543 223567889999999995 6999999999999
Q ss_pred CCceEEEEEeccCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC---CCcEEEee
Q 045539 685 DDFKALIMKYMPNGSLENCLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE---DMVAHISD 760 (897)
Q Consensus 685 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~---~~~~kL~D 760 (897)
++..++||||+++++|.+++... ...+++.++..++.|++.||+|| |++||+||||||+||+++. ++.+||+|
T Consensus 101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~L---H~~givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYL---HQNNIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCChHHEEEecCCCCCcEEEee
Confidence 99999999999999999998654 35689999999999999999999 8899999999999999987 78999999
Q ss_pred ccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCch
Q 045539 761 FGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVS 840 (897)
Q Consensus 761 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 840 (897)
||++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+ .
T Consensus 178 fg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~----------- 241 (327)
T 3lm5_A 178 FGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--T----------- 241 (327)
T ss_dssp GGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H-----------
T ss_pred CccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--H-----------
Confidence 999987653322 234569999999999999999999999999999999999999996521110 0
Q ss_pred HHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 841 VMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 841 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
...+...... .+. .........+.+++.+|++.|| ++|||++|+++.
T Consensus 242 ~~~i~~~~~~-~~~---~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~~ll~h 288 (327)
T 3lm5_A 242 YLNISQVNVD-YSE---ETFSSVSQLATDFIQSLLVKNP-EKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHTCCC-CCT---TTTTTSCHHHHHHHHHHSCSSG-GGSCCHHHHTTC
T ss_pred HHHHHhcccc-cCc---hhhcccCHHHHHHHHHHcCCCh-hhCcCHHHHhCC
Confidence 0001100000 000 0001223457889999999999 999999999863
No 207
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.4e-38 Score=344.17 Aligned_cols=253 Identities=23% Similarity=0.296 Sum_probs=199.1
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
..++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3568999999999999999999876 589999999987665566788999999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
|+++++|.+++......+++..+..++.|++.||+|| |+.||+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL---HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-- 171 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc--
Confidence 9999999999877556699999999999999999999 78899999999999999999999999999875432111
Q ss_pred eeeeccccCcccCCcCcc-----CCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 774 SIQIQTLATIGYMAPEYG-----TKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
.......||+.|+|||++ ....++.++||||||+++|+|++|+.||....... ..........+ .
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~---------~ 241 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSDPP---------T 241 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCC---------C
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccCCc---------c
Confidence 112234689999999987 46778999999999999999999999997632110 00001000000 0
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.. .+ .....++.+++.+||+.|| ++|||++|+++
T Consensus 242 ~~-~~-------~~~~~~l~~li~~~l~~dp-~~Rps~~~ll~ 275 (302)
T 2j7t_A 242 LL-TP-------SKWSVEFRDFLKIALDKNP-ETRPSAAQLLE 275 (302)
T ss_dssp CS-SG-------GGSCHHHHHHHHHHSCSCT-TTSCCHHHHTT
T ss_pred cC-Cc-------cccCHHHHHHHHHHcccCh-hhCCCHHHHhc
Confidence 00 00 1123457899999999999 99999999986
No 208
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.3e-38 Score=343.77 Aligned_cols=263 Identities=20% Similarity=0.258 Sum_probs=201.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCccceEeeeecC--CCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIR-HRNLVKIISSCSN--DDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... .+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 368999999999999999999864 68999999987543 357889999999997 9999999999987 6678999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCC-cEEEeeccCccccCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDM-VAHISDFGIAKLLSGE 770 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~-~~kL~DFg~a~~~~~~ 770 (897)
|||+++++|.+++.. +++.++..++.|++.||+|| |++||+||||||+||+++.++ .+||+|||+++.....
T Consensus 112 ~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC---HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 999999999998753 78999999999999999999 889999999999999999776 8999999999876543
Q ss_pred CceeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhh--
Q 045539 771 DQLSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDT-- 847 (897)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-- 847 (897)
.. .....|+..|+|||++.+ ..++.++|||||||++|||++|+.||.........+.......-.....+.++.
T Consensus 185 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 QE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp CC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred Cc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 32 234568999999998776 678999999999999999999999995432221111111111111111111111
Q ss_pred -------------hhcchhhhh--HHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 848 -------------NLLRGEERF--FAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 848 -------------~l~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
......... .........++.+++.+|++.|| ++|||++|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rpta~e~l~h 320 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH-QSRLTAREAMEH 320 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSG-GGSCCHHHHHTS
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCc-ccCCCHHHHhcC
Confidence 100000000 00001134568899999999999 999999999873
No 209
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-38 Score=348.88 Aligned_cols=271 Identities=21% Similarity=0.248 Sum_probs=198.2
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHH-----HHHHHHHHHHHHHhcCCCccceEeeeecCCCc
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYER-----ALKSFEDECEVMKRIRHRNLVKIISSCSNDDF 687 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 687 (897)
...++|++.+.||+|+||.||+|++. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 44678999999999999999999876 5899999998753221 12467899999999999999999999999999
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
.++||||+++ +|.+++......+++.++..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL---HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHH---HHCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999975 89988887776789999999999999999999 8899999999999999999999999999999876
Q ss_pred CCCCceeeeeccccCcccCCcCccCCC-CCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCC---chHHH
Q 045539 768 SGEDQLSIQIQTLATIGYMAPEYGTKG-RVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLP---VSVME 843 (897)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 843 (897)
..... ......||+.|+|||++.+. .++.++|||||||++|||++|..||...... ..+.+....... ....+
T Consensus 163 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 163 GSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSS
T ss_pred cCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhhhh
Confidence 43322 22345689999999988654 5789999999999999999999998753211 111111110000 00000
Q ss_pred ---Hhhhhhcch-hhhh-HHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 844 ---VIDTNLLRG-EERF-FAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 844 ---~i~~~l~~~-~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
..+...... +... .........++.+++.+|++.|| ++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNP-CARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSST-TTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccCh-hhCCCHHHHhcC
Confidence 000000000 0000 00011223568899999999999 999999999874
No 210
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-38 Score=348.61 Aligned_cols=260 Identities=22% Similarity=0.271 Sum_probs=194.9
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCC------
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDD------ 686 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 686 (897)
.++|++.+.||+|+||.||+|.+. +|+.||||++.... ....+++.+|++++++++||||+++++++..++
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 568999999999999999999875 69999999985432 344577889999999999999999999997653
Q ss_pred ceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 687 FKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 687 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
..|+||||+ +++|.+++... .+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYI---HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 88999998874 489999999999999999999 889999999999999999999999999999987
Q ss_pred cCCCCceeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhh-----------
Q 045539 767 LSGEDQLSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIN----------- 834 (897)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~----------- 834 (897)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+.....
T Consensus 178 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHH
T ss_pred cccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHH
Confidence 5432 234568999999998766 67899999999999999999999999753211 01111111
Q ss_pred hcCCchHHHHhhhhh---cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 835 DLLPVSVMEVIDTNL---LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 835 ~~~~~~~~~~i~~~l---~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..........+...- ....... .......+.+++.+|++.|| ++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~mL~~dP-~~R~t~~e~l~ 307 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASI---LTNASPLAVNLLEKMLVLDA-EQRVTAGEALA 307 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGT---CTTCCHHHHHHHHHHSCSST-TTSCCHHHHHH
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHH---CCCCCHHHHHHHHHHccCCh-hHCCCHHHHhc
Confidence 000001111111000 0000000 01223457899999999999 99999999987
No 211
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.3e-38 Score=364.12 Aligned_cols=250 Identities=20% Similarity=0.314 Sum_probs=197.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++++.. ......+.+|+++++.++||||+++++++.+++..|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 458999999999999999999876 68899999987543 223567889999999999999999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCC---CcEEEeeccCccccCC
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDED---MVAHISDFGIAKLLSG 769 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~---~~~kL~DFg~a~~~~~ 769 (897)
||+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.. +.+||+|||++.....
T Consensus 116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYL---HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999998887654 589999999999999999999 88999999999999999764 4599999999987654
Q ss_pred CCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhh
Q 045539 770 EDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNL 849 (897)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 849 (897)
... .....||+.|+|||++. +.++.++||||+||++|+|++|+.||...... .... .+.....
T Consensus 192 ~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~-----------~i~~~~~ 254 (494)
T 3lij_A 192 QKK---MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILR-----------KVEKGKY 254 (494)
T ss_dssp TBC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-----------HHHHTCC
T ss_pred Ccc---ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHH-----------HHHhCCC
Confidence 322 23456999999999876 56899999999999999999999999763111 0101 1111000
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.... +....+...+.+++.+||+.|| ++|||++|+++
T Consensus 255 ~~~~----~~~~~~s~~~~~li~~~L~~dp-~~R~s~~e~l~ 291 (494)
T 3lij_A 255 TFDS----PEWKNVSEGAKDLIKQMLQFDS-QRRISAQQALE 291 (494)
T ss_dssp CCCS----GGGTTSCHHHHHHHHHHTCSST-TTSCCHHHHHT
T ss_pred CCCc----hhcccCCHHHHHHHHHHCCCCh-hhCccHHHHhc
Confidence 0000 0011233457899999999999 99999999985
No 212
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.1e-37 Score=346.60 Aligned_cols=277 Identities=19% Similarity=0.217 Sum_probs=204.4
Q ss_pred CCHHHHHHHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhh-----------HHHHHHHHHHHHHHHhcCCCcc
Q 045539 607 FSYHELLRATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQY-----------ERALKSFEDECEVMKRIRHRNL 675 (897)
Q Consensus 607 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~-----------~~~~~~~~~E~~~l~~l~h~ni 675 (897)
....++....++|++.+.||+|+||.||+|...+|+.||||++.... ....+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 34667888899999999999999999999998889999999985421 2234788999999999999999
Q ss_pred ceEeeeec-----CCCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee
Q 045539 676 VKIISSCS-----NDDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL 750 (897)
Q Consensus 676 v~l~~~~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll 750 (897)
+++++++. .....|+||||++ |+|.+++......+++..+..++.|++.||+|| |++||+||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVL---HEAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCcCEecCCChHHEEE
Confidence 99999983 3446899999997 688888887776799999999999999999999 78899999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccch
Q 045539 751 DEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSL 829 (897)
Q Consensus 751 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~ 829 (897)
+.++.+||+|||++....... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... ...
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~ 243 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQL 243 (362)
T ss_dssp CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHH
T ss_pred cCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHH
Confidence 999999999999997543322 2234568999999998776 67899999999999999999999999763211 011
Q ss_pred hHHhhhcC-----------CchHHHHhhhhhcchhhhhH-HHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 830 NRWINDLL-----------PVSVMEVIDTNLLRGEERFF-AAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 830 ~~~~~~~~-----------~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
........ .....+.+.......+.... .........+.+++.+|++.|| ++|||++|+++.
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~ell~h 317 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNP-QRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSG-GGSCCHHHHHTS
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCCh-hhCCCHHHHHcC
Confidence 11111000 01111112111111111111 1111224558899999999999 999999999863
No 213
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.6e-37 Score=332.28 Aligned_cols=247 Identities=23% Similarity=0.335 Sum_probs=196.7
Q ss_pred cCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecC----CCceE
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSN----DDFKA 689 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 689 (897)
..|.+.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.. +...+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 35788889999999999999875 58889999987543 4456788999999999999999999998854 45689
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEeCCCCCCCeeeC-CCCcEEEeeccCccc
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP--IIHCDLKPSNVLLD-EDMVAHISDFGIAKL 766 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~--ivH~Dlkp~NIll~-~~~~~kL~DFg~a~~ 766 (897)
+||||+++++|.+++.... .+++..+..++.|++.||+|| |+.| |+||||||+||+++ .++.+||+|||++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHH---HcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 9999999999999997643 589999999999999999999 7777 99999999999998 789999999999976
Q ss_pred cCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhh
Q 045539 767 LSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVID 846 (897)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 846 (897)
..... .....||+.|+|||++. +.++.++||||+|+++|+|++|+.||..................+
T Consensus 182 ~~~~~----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------- 248 (290)
T 1t4h_A 182 KRASF----AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP-------- 248 (290)
T ss_dssp CCTTS----BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--------
T ss_pred ccccc----cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc--------
Confidence 54332 22356899999999876 468999999999999999999999997532111111000000000
Q ss_pred hhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 847 TNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 847 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.... .....++.+++.+||+.|| ++|||++|+++
T Consensus 249 ----~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~ell~ 282 (290)
T 1t4h_A 249 ----ASFD------KVAIPEVKEIIEGCIRQNK-DERYSIKDLLN 282 (290)
T ss_dssp ----GGGG------GCCCHHHHHHHHHHSCSSG-GGSCCHHHHHT
T ss_pred ----cccC------CCCCHHHHHHHHHHccCCh-hhCCCHHHHhh
Confidence 0000 0112357899999999999 99999999987
No 214
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.1e-38 Score=366.18 Aligned_cols=250 Identities=22% Similarity=0.328 Sum_probs=203.2
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 468999999999999999999876 68999999986542 23457889999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee---CCCCcEEEeeccCccccC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll---~~~~~~kL~DFg~a~~~~ 768 (897)
|||+.+++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||++....
T Consensus 105 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYM---HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999999887654 589999999999999999999 88999999999999999 567899999999998765
Q ss_pred CCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 769 GEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
.... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... ..... +....
T Consensus 181 ~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~-----------i~~~~ 243 (484)
T 3nyv_A 181 ASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKK-----------VEKGK 243 (484)
T ss_dssp CCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH-----------HHHCC
T ss_pred cccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHHH-----------HHcCC
Confidence 4332 234569999999998765 6899999999999999999999999762111 11111 11100
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.... .+....+..++.+++.+|++.|| ++|||++|+++
T Consensus 244 ~~~~----~~~~~~~s~~~~~li~~~L~~dp-~~R~s~~e~l~ 281 (484)
T 3nyv_A 244 YTFE----LPQWKKVSESAKDLIRKMLTYVP-SMRISARDALD 281 (484)
T ss_dssp CCCC----SGGGGGSCHHHHHHHHHHTCSSG-GGSCCHHHHHT
T ss_pred CCCC----CcccccCCHHHHHHHHHHCCCCh-hHCcCHHHHhh
Confidence 0000 01111233457899999999999 99999999986
No 215
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.4e-37 Score=333.20 Aligned_cols=246 Identities=21% Similarity=0.303 Sum_probs=203.0
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE---RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 468999999999999999999876 578899999875432 2346788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+.......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYC---HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 99999999999987654 589999999999999999999 89999999999999999999999999999987654322
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
.....|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .. ...+......
T Consensus 169 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~-----------~~~~~~~~~~- 230 (284)
T 2vgo_A 169 ----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ET-----------HRRIVNVDLK- 230 (284)
T ss_dssp ----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HH-----------HHHHHTTCCC-
T ss_pred ----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HH-----------HHHHhccccC-
Confidence 23456899999999999989999999999999999999999999752111 00 0111111110
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.+. ....++.+++.+|++.|| ++|||++|+++
T Consensus 231 ~~~-------~~~~~~~~li~~~l~~~p-~~Rps~~~ll~ 262 (284)
T 2vgo_A 231 FPP-------FLSDGSKDLISKLLRYHP-PQRLPLKGVME 262 (284)
T ss_dssp CCT-------TSCHHHHHHHHHHSCSSG-GGSCCHHHHHT
T ss_pred CCC-------cCCHHHHHHHHHHhhcCH-hhCCCHHHHhh
Confidence 000 122457889999999999 99999999986
No 216
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8.2e-38 Score=335.69 Aligned_cols=245 Identities=18% Similarity=0.262 Sum_probs=198.0
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 690 (897)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+..+.++ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4578999999999999999999876 69999999987532 33456788899999999 89999999999999999999
Q ss_pred EEEeccCCChhHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCC--------------
Q 045539 691 IMKYMPNGSLENCLYSGT---CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDED-------------- 753 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~-------------- 753 (897)
||||+++++|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI---HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999987642 4589999999999999999999 88999999999999999844
Q ss_pred -----CcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCC-CCCccchHHHHHHHHHHHHcCCCCCcccccCcc
Q 045539 754 -----MVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKG-RVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGEL 827 (897)
Q Consensus 754 -----~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvil~elltg~~p~~~~~~~~~ 827 (897)
..+||+|||.+....... ...||+.|+|||++.+. .+++++|||||||++|||++|..|+... .
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~ 235 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----D 235 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----H
T ss_pred ccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----h
Confidence 479999999998765332 23589999999988765 5678999999999999999998876431 0
Q ss_pred chhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 828 SLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 828 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
.. ..+........+. ....++.+++.+||+.|| ++|||++|+++.
T Consensus 236 ~~------------~~~~~~~~~~~~~-------~~~~~~~~li~~~l~~dp-~~Rps~~~ll~h 280 (289)
T 1x8b_A 236 QW------------HEIRQGRLPRIPQ-------VLSQEFTELLKVMIHPDP-ERRPSAMALVKH 280 (289)
T ss_dssp HH------------HHHHTTCCCCCSS-------CCCHHHHHHHHHHTCSSG-GGSCCHHHHHTC
T ss_pred HH------------HHHHcCCCCCCCc-------ccCHHHHHHHHHHhCCCc-ccCCCHHHHhhC
Confidence 11 1111111111110 122457899999999999 999999999864
No 217
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7.5e-38 Score=343.16 Aligned_cols=267 Identities=23% Similarity=0.319 Sum_probs=200.0
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 468999999999999999999876 58999999986432 334567889999999999999999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
||+++++|.++..... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+........
T Consensus 104 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFC---HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHH---HHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 9999999988765544 589999999999999999999 889999999999999999999999999999986643322
Q ss_pred eeeeeccccCcccCCcCccCCC-CCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhh--cCCchHHHHhhhh-
Q 045539 773 LSIQIQTLATIGYMAPEYGTKG-RVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIND--LLPVSVMEVIDTN- 848 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~- 848 (897)
......||+.|+|||++.+. .++.++||||+||++|||++|+.||......+ ........ .............
T Consensus 180 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 180 --VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred --ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhcc
Confidence 22345689999999988765 78999999999999999999999997632111 11111100 0011111111100
Q ss_pred ---------hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 849 ---------LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 849 ---------l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
+.... ............+.+++.+||+.|| ++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~L~~dP-~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKERE-PLERRYPKLSEVVIDLAKKCLHIDP-DKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCC-CHHHHSTTSCHHHHHHHHHHTCSSG-GGSCCGGGGGG
T ss_pred ccccccCccccccc-hhhhcccchhHHHHHHHHHHhccCc-ccCCCHHHHhc
Confidence 00000 0001111334568999999999999 99999999986
No 218
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=9.5e-38 Score=342.76 Aligned_cols=249 Identities=19% Similarity=0.271 Sum_probs=204.5
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 568999999999999999999876 58899999987542 34567788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999887643 589999999999999999999 78899999999999999999999999999998764332
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
. ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ . ...+......
T Consensus 196 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~--------~~~~~~~~~~- 259 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-----T--------YLRIKKNEYS- 259 (335)
T ss_dssp C--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----H--------HHHHHHTCCC-
T ss_pred c--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-----H--------HHHHhcCCCC-
Confidence 2 2234568999999999988889999999999999999999999997521110 0 0001110000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
.+. .....+.+++.+||+.|| ++|||++|+++.
T Consensus 260 ~~~-------~~~~~~~~li~~~l~~dp-~~Rps~~ell~~ 292 (335)
T 2owb_A 260 IPK-------HINPVAASLIQKMLQTDP-TARPTINELLND 292 (335)
T ss_dssp CCT-------TSCHHHHHHHHHHTCSSG-GGSCCGGGGGGS
T ss_pred CCc-------cCCHHHHHHHHHHccCCh-hHCcCHHHHhcC
Confidence 000 122347789999999999 999999999863
No 219
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=348.67 Aligned_cols=252 Identities=21% Similarity=0.257 Sum_probs=185.9
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCccceEeeee--------cC
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIR-HRNLVKIISSC--------SN 684 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~--------~~ 684 (897)
...+|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++++. ||||+++++++ ..
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 3468999999999999999999875 68999999987666666778899999999996 99999999998 34
Q ss_pred CCceEEEEEeccCCChhHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEeCCCCCCCeeeCCCCcEEEee
Q 045539 685 DDFKALIMKYMPNGSLENCLYS--GTCMLDIFQRLNIMIDVALALEYLHFGHSTP--IIHCDLKPSNVLLDEDMVAHISD 760 (897)
Q Consensus 685 ~~~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~--ivH~Dlkp~NIll~~~~~~kL~D 760 (897)
....++||||++ |+|.+++.. ....+++.++..++.|++.||+|| |+.| |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM---HRQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HhCCCCEEEccCCcccEEECCCCCEEEec
Confidence 456799999995 789888764 334699999999999999999999 7788 99999999999999999999999
Q ss_pred ccCccccCCCCcee----------eeeccccCcccCCcCcc---CCCCCCccchHHHHHHHHHHHHcCCCCCcccccCcc
Q 045539 761 FGIAKLLSGEDQLS----------IQIQTLATIGYMAPEYG---TKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGEL 827 (897)
Q Consensus 761 Fg~a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~ 827 (897)
||++.......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-- 259 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-- 259 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--
Confidence 99998765432211 11134589999999987 5677899999999999999999999999752111
Q ss_pred chhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 828 SLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 828 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
+ ++......... ......+.+++.+||+.|| ++|||++|+++.|+
T Consensus 260 ---~------------~~~~~~~~~~~------~~~~~~~~~li~~~l~~~p-~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 260 ---R------------IVNGKYSIPPH------DTQYTVFHSLIRAMLQVNP-EERLSIAEVVHQLQ 304 (337)
T ss_dssp ---------------------CCCCTT------CCSSGGGHHHHHHHSCSSG-GGSCCHHHHHHHHH
T ss_pred ---H------------hhcCcccCCcc------cccchHHHHHHHHHccCCh-hhCcCHHHHHHHHH
Confidence 0 11111100000 0111236789999999999 99999999999875
No 220
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=9.6e-38 Score=337.02 Aligned_cols=252 Identities=20% Similarity=0.282 Sum_probs=203.0
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---------HHHHHHHHHHHHHHHhcC-CCccceEeeeec
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---------ERALKSFEDECEVMKRIR-HRNLVKIISSCS 683 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 683 (897)
..++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578999999999999999999876 68999999986432 234567889999999996 999999999999
Q ss_pred CCCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccC
Q 045539 684 NDDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGI 763 (897)
Q Consensus 684 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~ 763 (897)
+++..++||||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 9999999999999999999987653 589999999999999999999 889999999999999999999999999999
Q ss_pred ccccCCCCceeeeeccccCcccCCcCccC------CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcC
Q 045539 764 AKLLSGEDQLSIQIQTLATIGYMAPEYGT------KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLL 837 (897)
Q Consensus 764 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 837 (897)
+........ .....|++.|+|||++. ...++.++||||||+++|||++|+.||...... ...+
T Consensus 171 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~------ 239 (298)
T 1phk_A 171 SCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LMLR------ 239 (298)
T ss_dssp CEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH------
T ss_pred hhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--HHHH------
Confidence 987654322 23456899999999863 556889999999999999999999999652111 0000
Q ss_pred CchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 838 PVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 838 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.+......... +.......++.+++.+|++.|| ++|||++|+++
T Consensus 240 -----~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp-~~Rps~~~ll~ 283 (298)
T 1phk_A 240 -----MIMSGNYQFGS----PEWDDYSDTVKDLVSRFLVVQP-QKRYTAEEALA 283 (298)
T ss_dssp -----HHHHTCCCCCT----TTGGGSCHHHHHHHHHHCCSSG-GGSCCHHHHTT
T ss_pred -----HHhcCCcccCc----ccccccCHHHHHHHHHHccCCc-ccCCCHHHHHh
Confidence 11111100000 0011233457899999999999 99999999986
No 221
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=352.19 Aligned_cols=259 Identities=12% Similarity=0.120 Sum_probs=199.8
Q ss_pred hcCCCcCCeeecccceEEEEEEecC---------CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccce---------
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQD---------GMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVK--------- 677 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 677 (897)
.++|++.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999998763 789999998755 46788999999999999988
Q ss_pred ------EeeeecC-CCceEEEEEeccCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCee
Q 045539 678 ------IISSCSN-DDFKALIMKYMPNGSLENCLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVL 749 (897)
Q Consensus 678 ------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIl 749 (897)
+++++.. ++..|+||||+ +++|.+++... ...+++.++..++.|++.||+|| |++||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFL---HENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCHHHEE
Confidence 5566654 67889999999 99999999875 35699999999999999999999 7889999999999999
Q ss_pred eCCCC--cEEEeeccCccccCCCCcee-----eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCccc
Q 045539 750 LDEDM--VAHISDFGIAKLLSGEDQLS-----IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEI 822 (897)
Q Consensus 750 l~~~~--~~kL~DFg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~ 822 (897)
++.++ .+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 99999999998764322111 113347899999999999989999999999999999999999999864
Q ss_pred ccCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 823 FIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
............. +......... ..........++.+++.+||+.|| ++|||++||++.|+
T Consensus 272 ~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp-~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 272 LPNTEDIMKQKQK---------FVDKPGPFVG-PCGHWIRPSETLQKYLKVVMALTY-EEKPPYAMLRNNLE 332 (352)
T ss_dssp TTCHHHHHHHHHH---------HHHSCCCEEC-TTSCEECCCHHHHHHHHHHHTCCT-TCCCCHHHHHHHHH
T ss_pred CcCHHHHHHHHHh---------ccCChhhhhh-hccccCCCcHHHHHHHHHHHhCCh-hhCCCHHHHHHHHH
Confidence 3221111111100 0000000000 000000112458899999999999 99999999999875
No 222
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.4e-37 Score=336.67 Aligned_cols=249 Identities=25% Similarity=0.332 Sum_probs=204.5
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
.+.|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 467999999999999999999865 68999999987543 3345788999999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
|+++++|.+++... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+........
T Consensus 101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYL---HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 99999999998764 489999999999999999999 789999999999999999999999999999987653321
Q ss_pred eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchh
Q 045539 774 SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGE 853 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 853 (897)
......||+.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+....+ ..+..
T Consensus 175 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~--------~~~~~-- 241 (303)
T 3a7i_A 175 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPKNNP--------PTLEG-- 241 (303)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCC--------CCCCS--
T ss_pred -ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhcCCC--------CCCcc--
Confidence 223456899999999999999999999999999999999999998753111 01111110000 00111
Q ss_pred hhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 854 ERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 854 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
.....+.+++.+||+.|| ++|||++|+++.
T Consensus 242 --------~~~~~l~~li~~~l~~dp-~~Rps~~~ll~~ 271 (303)
T 3a7i_A 242 --------NYSKPLKEFVEACLNKEP-SFRPTAKELLKH 271 (303)
T ss_dssp --------SCCHHHHHHHHHHCCSSG-GGSCCHHHHTTC
T ss_pred --------ccCHHHHHHHHHHcCCCh-hhCcCHHHHhhC
Confidence 122457899999999999 999999999874
No 223
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2e-37 Score=330.56 Aligned_cols=248 Identities=24% Similarity=0.377 Sum_probs=195.6
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE---RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|.+.+.||+|+||.||+|++. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 468999999999999999999876 699999999976532 2356788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYC---HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999987654 489999999999999999999 78999999999999999999999999999998764332
Q ss_pred ceeeeeccccCcccCCcCccCCCCC-CccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRV-CTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
......|++.|+|||...+..+ +.++||||||+++|+|++|+.||...... .. .+.+.....
T Consensus 166 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~------------~~~~~~~~~ 228 (276)
T 2h6d_A 166 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TL------------FKKIRGGVF 228 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH------------HHHHHHCCC
T ss_pred ---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HH------------HHHhhcCcc
Confidence 1234468999999999887765 68999999999999999999999752111 00 111111110
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
..+. .....+.+++.+|++.|| ++|||++|+++.
T Consensus 229 ~~~~-------~~~~~l~~li~~~l~~~p-~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 YIPE-------YLNRSVATLLMHMLQVDP-LKRATIKDIREH 262 (276)
T ss_dssp CCCT-------TSCHHHHHHHHHHTCSSG-GGSCCHHHHHHS
T ss_pred cCch-------hcCHHHHHHHHHHccCCh-hhCCCHHHHHhC
Confidence 0010 122457889999999999 999999999874
No 224
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=334.18 Aligned_cols=252 Identities=20% Similarity=0.256 Sum_probs=197.6
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH----HHHHHHHHHHHHHHhcCCCccceEeeee--cCCCc
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE----RALKSFEDECEVMKRIRHRNLVKIISSC--SNDDF 687 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~ 687 (897)
..++|++.+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|++++++++||||+++++++ .+.+.
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 4579999999999999999999875 688999999976532 3457889999999999999999999998 45568
Q ss_pred eEEEEEeccCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 688 KALIMKYMPNGSLENCLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
.++||||++++ +.+++... ...+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYL---HSQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999876 66666543 35689999999999999999999 789999999999999999999999999999987
Q ss_pred cCCCCceeeeeccccCcccCCcCccCCCC--CCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHH
Q 045539 767 LSGEDQLSIQIQTLATIGYMAPEYGTKGR--VCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEV 844 (897)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (897)
..............||+.|+|||+..+.. ++.++||||||+++|||++|+.||...... + ..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~---------~~~~ 224 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-----K---------LFEN 224 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----H---------HHHH
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-----H---------HHHH
Confidence 65433333344556999999999876543 478999999999999999999999752110 0 0111
Q ss_pred hhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 845 IDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 845 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
+.......+ ..+...+.+++.+|++.|| ++|||++|+++.
T Consensus 225 i~~~~~~~~-------~~~~~~l~~li~~~l~~dp-~~Rps~~~ll~~ 264 (305)
T 2wtk_C 225 IGKGSYAIP-------GDCGPPLSDLLKGMLEYEP-AKRFSIRQIRQH 264 (305)
T ss_dssp HHHCCCCCC-------SSSCHHHHHHHHHHTCSST-TTSCCHHHHHHS
T ss_pred HhcCCCCCC-------CccCHHHHHHHHHHccCCh-hhCCCHHHHhcC
Confidence 111000000 0123457889999999999 999999999864
No 225
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=341.62 Aligned_cols=251 Identities=25% Similarity=0.300 Sum_probs=199.3
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4578999999999999999999876 58999999987543 23678899999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
|+++++|.+++......+++..+..++.|++.||+|| |+.||+||||||+||+++.++.+||+|||.+........
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 180 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYL---HFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA- 180 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-
Confidence 9999999999875555699999999999999999999 889999999999999999999999999999987653321
Q ss_pred eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchh
Q 045539 774 SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGE 853 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 853 (897)
......|++.|+|||+..+..++.++||||||+++|+|++|+.||....... ....+....+ .... .+
T Consensus 181 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~--------~~~~-~~ 248 (314)
T 3com_A 181 -KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNPP--------PTFR-KP 248 (314)
T ss_dssp -CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCC--------CCCS-SG
T ss_pred -ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCC--------cccC-Cc
Confidence 2234568999999999998899999999999999999999999997531110 0000000000 0000 00
Q ss_pred hhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 854 ERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 854 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
......+.+++.+||+.|| ++|||++|+++
T Consensus 249 -------~~~~~~l~~li~~~l~~dp-~~Rpt~~~ll~ 278 (314)
T 3com_A 249 -------ELWSDNFTDFVKQCLVKSP-EQRATATQLLQ 278 (314)
T ss_dssp -------GGSCHHHHHHHHHHTCSCT-TTSCCHHHHTT
T ss_pred -------ccCCHHHHHHHHHHccCCh-hhCcCHHHHHh
Confidence 1123457899999999999 99999999986
No 226
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.7e-38 Score=369.95 Aligned_cols=255 Identities=24% Similarity=0.428 Sum_probs=206.5
Q ss_pred HHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
...++|++.+.||+|+||.||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..|+|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3457899999999999999999999888889999998643 234678999999999999999999999976 67899999
Q ss_pred eccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 694 YMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
|+++|+|.+++.... ..+++.++..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+++......
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE- 417 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-
Confidence 999999999997532 4589999999999999999999 88999999999999999999999999999998764221
Q ss_pred eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
........++..|+|||++..+.++.++|||||||++|||++ |+.||...... +..+.+......
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--------------~~~~~i~~~~~~ 483 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------------EVLDQVERGYRM 483 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--------------HHHHHHHTTCCC
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------------HHHHHHHcCCCC
Confidence 111223456788999999888899999999999999999999 99998753211 111111111110
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
... ..+..++.+++.+||+.|| ++|||+++|++.|++
T Consensus 484 ~~~------~~~~~~l~~li~~cl~~dP-~~RPt~~~l~~~L~~ 520 (535)
T 2h8h_A 484 PCP------PECPESLHDLMCQCWRKEP-EERPTFEYLQAFLED 520 (535)
T ss_dssp CCC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHT
T ss_pred CCC------CCCCHHHHHHHHHHcCCCh-hHCcCHHHHHHHHHH
Confidence 000 1233457899999999999 999999999998864
No 227
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1e-37 Score=335.33 Aligned_cols=250 Identities=21% Similarity=0.251 Sum_probs=185.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 578999999999999999999874 68999999997542 223344555666688889999999999999999999999
Q ss_pred EeccCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 693 KYMPNGSLENCLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHST-PIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 693 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~-~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
||++ ++|.+++.. ....+++..+..++.|++.||+|| |++ ||+||||||+||+++.++.+||+|||.+....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL---HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 588776653 345699999999999999999999 777 99999999999999999999999999998764
Q ss_pred CCCceeeeeccccCcccCCcCcc----CCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHH
Q 045539 769 GEDQLSIQIQTLATIGYMAPEYG----TKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEV 844 (897)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (897)
.... .....||+.|+|||++ .+..++.++||||+|+++|||++|+.||........... ..
T Consensus 162 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~------------~~ 226 (290)
T 3fme_A 162 DDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK------------QV 226 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH------------HH
T ss_pred cccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH------------HH
Confidence 3322 2234689999999985 566789999999999999999999999975211111111 11
Q ss_pred hhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 845 IDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 845 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
+.......+. .....++.+++.+|++.|| ++|||++|+++
T Consensus 227 ~~~~~~~~~~------~~~~~~~~~li~~~l~~~p-~~Rpt~~e~l~ 266 (290)
T 3fme_A 227 VEEPSPQLPA------DKFSAEFVDFTSQCLKKNS-KERPTYPELMQ 266 (290)
T ss_dssp HHSCCCCCCT------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHTT
T ss_pred hccCCCCccc------ccCCHHHHHHHHHHhhcCh-hhCcCHHHHHh
Confidence 1111111110 1123457899999999999 99999999986
No 228
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=370.88 Aligned_cols=253 Identities=23% Similarity=0.375 Sum_probs=199.0
Q ss_pred CCCcCC-eeecccceEEEEEEec---CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 618 RFSENN-LIGIGSFGSIYVARLQ---DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 618 ~y~~~~-~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
+|.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.+ +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 344444 7999999999999764 46679999997643 2346789999999999999999999999976 5689999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
||+++|+|.+++......+++.++..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++.......
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999999999987777799999999999999999999 789999999999999999999999999999987653322
Q ss_pred e-eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhc
Q 045539 773 L-SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLL 850 (897)
Q Consensus 773 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 850 (897)
. .......+++.|+|||++....++.++|||||||++|||++ |+.||...... . ..+.+.....
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~------------~~~~i~~~~~ 557 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--E------------VMAFIEQGKR 557 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--H------------HHHHHHTTCC
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--H------------HHHHHHcCCC
Confidence 1 11222345689999999988899999999999999999998 99999763211 1 1111211111
Q ss_pred chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 851 RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 851 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
...+ ..+..++.+++.+||+.|| ++||++++|++.|+.
T Consensus 558 ~~~p------~~~~~~l~~li~~cl~~dP-~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 558 MECP------PECPPELYALMSDCWIYKW-EDRPDFLTVEQRMRA 595 (613)
T ss_dssp CCCC------TTCCHHHHHHHHHTTCSST-TTSCCHHHHHHHHHH
T ss_pred CCCC------CcCCHHHHHHHHHHcCCCh-hHCcCHHHHHHHHHH
Confidence 0000 1234568899999999999 999999999998853
No 229
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.8e-38 Score=342.52 Aligned_cols=267 Identities=20% Similarity=0.214 Sum_probs=193.1
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEE
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 690 (897)
...++|++.+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 45679999999999999999999865 68999999987543 2234567899999999999999999999999999999
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee-----CCCCcEEEeeccCcc
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL-----DEDMVAHISDFGIAK 765 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll-----~~~~~~kL~DFg~a~ 765 (897)
||||++ ++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||++.
T Consensus 111 v~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFC---HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 999997 59999987765 489999999999999999999 78999999999999999 455569999999998
Q ss_pred ccCCCCceeeeeccccCcccCCcCccCCC-CCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhh-cCCch--H
Q 045539 766 LLSGEDQLSIQIQTLATIGYMAPEYGTKG-RVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIND-LLPVS--V 841 (897)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~-~~~~~--~ 841 (897)
...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+ ........ ..+.. .
T Consensus 186 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 186 AFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTS
T ss_pred ccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchhhh
Confidence 764322 222345689999999988764 48999999999999999999999997532111 11111100 00000 0
Q ss_pred HH---------HhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 842 ME---------VIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 842 ~~---------~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.. ........... .........++.+++.+|++.|| ++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP-~~R~t~~e~l~ 318 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLK--RVLGALLDDEGLDLLTAMLEMDP-VKRISAKNALE 318 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHH--HHHGGGSCHHHHHHHHHHTCSSG-GGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccccHh--hhcccccCHHHHHHHHHHccCCh-hhCCCHHHHhC
Confidence 00 00000000000 00001123557899999999999 99999999987
No 230
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=334.55 Aligned_cols=250 Identities=26% Similarity=0.351 Sum_probs=196.4
Q ss_pred CCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEecc
Q 045539 618 RFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKYMP 696 (897)
Q Consensus 618 ~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 696 (897)
+|.....||+|+||.||+|++. +++.||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 4555669999999999999864 688999999976655556788999999999999999999999999999999999999
Q ss_pred CCChhHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC-CCcEEEeeccCccccCCCCce
Q 045539 697 NGSLENCLYSGT--CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE-DMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 697 ~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~-~~~~kL~DFg~a~~~~~~~~~ 773 (897)
+++|.+++.... ...++..+..++.|++.||+|| |++||+||||||+||+++. ++.+||+|||.+........
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~- 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL---HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP- 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHH---HhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-
Confidence 999999987653 3467888999999999999999 7899999999999999987 89999999999987643221
Q ss_pred eeeeccccCcccCCcCccCCCC--CCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcc
Q 045539 774 SIQIQTLATIGYMAPEYGTKGR--VCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLR 851 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 851 (897)
......|++.|+|||++.+.. ++.++||||||+++|||++|+.||............ ........
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~------------~~~~~~~~ 245 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK------------VGMFKVHP 245 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH------------HHHHCCCC
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh------------hccccccc
Confidence 223456899999999876543 789999999999999999999999752111100000 00000000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 852 GEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 852 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..+ .....++.+++.+||+.|| ++|||++|+++
T Consensus 246 ~~~------~~~~~~~~~li~~~l~~dp-~~Rps~~~ll~ 278 (295)
T 2clq_A 246 EIP------ESMSAEAKAFILKCFEPDP-DKRACANDLLV 278 (295)
T ss_dssp CCC------TTSCHHHHHHHHHTTCSST-TTSCCHHHHHT
T ss_pred ccc------ccCCHHHHHHHHHHccCCh-hhCCCHHHHhc
Confidence 000 1123457889999999999 99999999986
No 231
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=7.8e-38 Score=346.91 Aligned_cols=263 Identities=23% Similarity=0.280 Sum_probs=184.6
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCC------C
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSND------D 686 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 686 (897)
.++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 579999999999999999999864 68999999986532 34457788999999999999999999998654 5
Q ss_pred ceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 687 FKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 687 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
..|+|||++ +++|.+++... .+++..+..++.||++||+|| |++||+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 78999988764 489999999999999999999 889999999999999999999999999999986
Q ss_pred cCCCCceeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhh-----------
Q 045539 767 LSGEDQLSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIN----------- 834 (897)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~----------- 834 (897)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+.....
T Consensus 182 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 182 TADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHT
T ss_pred cccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 5422 234578999999998776 67899999999999999999999999753211 01111111
Q ss_pred hcCCchHHHHhhhhhcchhhhhHH-HHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 835 DLLPVSVMEVIDTNLLRGEERFFA-AKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 835 ~~~~~~~~~~i~~~l~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
..........+.. +...+...+. ........+.+++.+|++.|| ++|||++|+++.
T Consensus 256 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP-~~R~t~~e~L~h 312 (367)
T 2fst_X 256 KISSESARNYIQS-LTQMPKMNFANVFIGANPLAVDLLEKMLVLDS-DKRITAAQALAH 312 (367)
T ss_dssp TCCCHHHHHHHHT-SCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSG-GGSCCHHHHHTS
T ss_pred HhhhHHHHHHHhc-cCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCc-ccCcCHHHHhcC
Confidence 0001111111111 1111100011 111223557899999999999 999999999863
No 232
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.7e-38 Score=341.67 Aligned_cols=256 Identities=22% Similarity=0.304 Sum_probs=195.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec--CCc--eEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ--DGM--EVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 688 (897)
.++|++.+.||+|+||.||+|++. +++ .||+|+++... ....+.+.+|++++++++||||+++++++.++. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 468999999999999999999853 233 68999987542 344678899999999999999999999998765 7
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
++||||+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 899999999999999987666699999999999999999999 78899999999999999999999999999998775
Q ss_pred CCCcee-eeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhh
Q 045539 769 GEDQLS-IQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVID 846 (897)
Q Consensus 769 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 846 (897)
...... ......+|+.|+|||+..+..++.++||||||+++|||++ |+.||...... .... .+..
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~-----------~~~~ 239 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILH-----------KIDK 239 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH-----------HHHT
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHH-----------HHHc
Confidence 443322 2233457889999999888888999999999999999999 99999753111 0000 0100
Q ss_pred hhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 847 TNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 847 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
....... ...+..++.+++.+||+.|| ++|||++|+++.|++
T Consensus 240 ~~~~~~~------~~~~~~~l~~li~~~l~~~p-~~Rps~~~l~~~l~~ 281 (291)
T 1u46_A 240 EGERLPR------PEDCPQDIYNVMVQCWAHKP-EDRPTFVALRDFLLE 281 (291)
T ss_dssp SCCCCCC------CTTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred cCCCCCC------CcCcCHHHHHHHHHHccCCc-ccCcCHHHHHHHHHH
Confidence 0000000 01223458899999999999 999999999998853
No 233
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.7e-38 Score=337.65 Aligned_cols=248 Identities=27% Similarity=0.400 Sum_probs=194.6
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecC-CCceEEEEEe
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSN-DDFKALIMKY 694 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~ 694 (897)
.++|++.+.||+|+||.||+|+.. |+.||+|+++... ..+.+.+|++++++++||||+++++++.+ ++..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 578999999999999999999876 8999999987543 34678899999999999999999998754 4578999999
Q ss_pred ccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce
Q 045539 695 MPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 773 (897)
Q Consensus 695 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~ 773 (897)
+++++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+.......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHH---HhCCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 99999999987654 2378899999999999999999 88999999999999999999999999999987654321
Q ss_pred eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcch
Q 045539 774 SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRG 852 (897)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 852 (897)
....+++.|+|||...+..++.++||||||+++|||++ |+.||...... ..... +.......
T Consensus 172 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~------------~~~~~~~~ 234 (278)
T 1byg_A 172 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPR------------VEKGYKMD 234 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHH------------HTTTCCCC
T ss_pred ---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH------------HhcCCCCC
Confidence 22357889999999988889999999999999999998 99998753211 11111 11110000
Q ss_pred hhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 853 EERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 853 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.. ......+.+++.+||+.|| ++|||++|+++.|++
T Consensus 235 ~~------~~~~~~l~~li~~~l~~~p-~~Rps~~~l~~~L~~ 270 (278)
T 1byg_A 235 AP------DGCPPAVYEVMKNCWHLDA-AMRPSFLQLREQLEH 270 (278)
T ss_dssp CC------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHHH
T ss_pred Cc------ccCCHHHHHHHHHHhcCCh-hhCCCHHHHHHHHHH
Confidence 00 1123457899999999999 999999999998853
No 234
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3e-38 Score=337.55 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=201.2
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeee--cCCCceEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSC--SNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~~l 690 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++ ..++..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999876 68999999987432 34567889999999999999999999987 44678899
Q ss_pred EEEeccCCChhHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----cEeCCCCCCCeeeCCCCcEEEeecc
Q 045539 691 IMKYMPNGSLENCLYSGT---CMLDIFQRLNIMIDVALALEYLHFGHSTP-----IIHCDLKPSNVLLDEDMVAHISDFG 762 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~-----ivH~Dlkp~NIll~~~~~~kL~DFg 762 (897)
||||+++++|.+++.... ..+++..+..++.|++.||+|| |+.| |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC---HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHH---hcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999987532 4589999999999999999999 6666 9999999999999999999999999
Q ss_pred CccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHH
Q 045539 763 IAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVM 842 (897)
Q Consensus 763 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 842 (897)
.+........ ......|++.|+|||+..+..++.++||||||+++|+|++|+.||...... .....+
T Consensus 162 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i--------- 228 (279)
T 2w5a_A 162 LARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKI--------- 228 (279)
T ss_dssp HHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH---------
T ss_pred hheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHH---------
Confidence 9987643321 122346899999999998888999999999999999999999999763111 111111
Q ss_pred HHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 843 EVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 843 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
........+ .....++.+++.+||+.|| ++|||++||++.+.
T Consensus 229 --~~~~~~~~~-------~~~~~~l~~li~~~l~~~p-~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 229 --REGKFRRIP-------YRYSDELNEIITRMLNLKD-YHRPSVEEILENPL 270 (279)
T ss_dssp --HHTCCCCCC-------TTSCHHHHHHHHHHTCSSG-GGSCCHHHHHTSTT
T ss_pred --hhcccccCC-------cccCHHHHHHHHHHcCCCc-ccCCCHHHHHhChh
Confidence 111000001 0123457899999999999 99999999998764
No 235
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=6.1e-38 Score=346.94 Aligned_cols=270 Identities=20% Similarity=0.264 Sum_probs=200.4
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCccceEeeeecC--------
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE--RALKSFEDECEVMKRIRHRNLVKIISSCSN-------- 684 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 684 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... .....+.+|++++++++||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 468999999999999999999874 689999999864432 223567789999999999999999999876
Q ss_pred CCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCc
Q 045539 685 DDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIA 764 (897)
Q Consensus 685 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a 764 (897)
++..++||||+++ ++.+.+......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI---HRNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 4468999999975 78777777666799999999999999999999 8899999999999999999999999999999
Q ss_pred cccCCCCc--eeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhh---hcCC
Q 045539 765 KLLSGEDQ--LSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIN---DLLP 838 (897)
Q Consensus 765 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~---~~~~ 838 (897)
........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+. ...+
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALISQLCGSIT 249 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCC
Confidence 87642221 122234568999999998765 56799999999999999999999999763211 1111110 0011
Q ss_pred chH-HH-----Hhhhh--hcchhhhhHHHHH--HHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 839 VSV-ME-----VIDTN--LLRGEERFFAAKE--QILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 839 ~~~-~~-----~i~~~--l~~~~~~~~~~~~--~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
... .. ..+.. ............. .....+.+++.+|++.|| ++|||++|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP-AQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSG-GGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCCh-hhCCCHHHHhCC
Confidence 100 00 00000 0000000000000 112457899999999999 999999999873
No 236
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.5e-37 Score=355.13 Aligned_cols=259 Identities=20% Similarity=0.259 Sum_probs=205.0
Q ss_pred hcCCCcCCeeecccceEEEEEEe-cCCceEEEEEechhhHHHHHHHHHHHHHHHhcCC-CccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-QDGMEVAVKVFHQQYERALKSFEDECEVMKRIRH-RNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 693 (897)
.++|++.+.||+|+||.||+|++ .+++.||||++...... +.+.+|+++++.++| +++..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 47899999999999999999986 46899999987654322 457789999999986 566667777788889999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee---CCCCcEEEeeccCccccCCC
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLSGE 770 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll---~~~~~~kL~DFg~a~~~~~~ 770 (897)
|+ +++|.+++......+++.+++.|+.||+.||+|| |++||+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV---HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 9999999987666799999999999999999999 88999999999999999 58889999999999876543
Q ss_pred Cce-----eeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHh
Q 045539 771 DQL-----SIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVI 845 (897)
Q Consensus 771 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i 845 (897)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .... ...+.
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~--~~~~--------~~~i~ 229 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT--KKQK--------YEKIS 229 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS--HHHH--------HHHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh--HHHH--------HHHHh
Confidence 321 11225579999999999999999999999999999999999999997632221 0000 11111
Q ss_pred hhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 846 DTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 846 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
...+....+ .....+..++.+++..||+.|| ++||++++|++.|+
T Consensus 230 ~~~~~~~~~---~l~~~~p~~l~~li~~cl~~dP-~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 230 EKKVATSIE---ALCRGYPTEFASYFHYCRSLRF-DDKPDYSYLKRLFR 274 (483)
T ss_dssp HHHHHSCHH---HHHTTSCHHHHHHHHHHHTCCT-TCCCCHHHHHHHHH
T ss_pred hccccccHH---HHhcCCcHHHHHHHHHHhcCCh-hhCcCHHHHHHHHH
Confidence 111111110 0111234568999999999999 99999999999875
No 237
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.1e-38 Score=356.15 Aligned_cols=240 Identities=15% Similarity=0.179 Sum_probs=186.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechh---hHHHHHHHHHHHH---HHHhcCCCccceEe-------ee
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQ---YERALKSFEDECE---VMKRIRHRNLVKII-------SS 681 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~l~-------~~ 681 (897)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++ ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467899999999999999999864 6999999998743 2345678899995 55555799999998 55
Q ss_pred ecCCC-----------------ceEEEEEeccCCChhHhhhcCCC------CCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 045539 682 CSNDD-----------------FKALIMKYMPNGSLENCLYSGTC------MLDIFQRLNIMIDVALALEYLHFGHSTPI 738 (897)
Q Consensus 682 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~------~~~~~~~~~i~~~i~~~L~~Lh~~h~~~i 738 (897)
+.+++ ..|+||||+ +|+|.+++..... .+++..+..++.||+.||+|| |++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL---HHYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHH---HHTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHH---HhCCe
Confidence 55443 378999999 6899999876432 233578889999999999999 78999
Q ss_pred EeCCCCCCCeeeCCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCC-----------CCCccchHHHHHH
Q 045539 739 IHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKG-----------RVCTRGDVYSYGI 807 (897)
Q Consensus 739 vH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDv~slGv 807 (897)
+||||||+||+++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999986432 2334567 999999998877 8999999999999
Q ss_pred HHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHH
Q 045539 808 MLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMG 887 (897)
Q Consensus 808 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~ 887 (897)
++|||++|+.||....... ....+ .. .. . .+..++.+++.+||+.|| ++|||++
T Consensus 302 il~elltg~~Pf~~~~~~~--~~~~~-----------~~-~~-~----------~~~~~~~~li~~~L~~dp-~~Rpt~~ 355 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALG--GSEWI-----------FR-SC-K----------NIPQPVRALLEGFLRYPK-EDRLLPL 355 (377)
T ss_dssp HHHHHHHSSCCC------C--CSGGG-----------GS-SC-C----------CCCHHHHHHHHHHTCSSG-GGCCCHH
T ss_pred HHHHHHHCCCCCccccccc--chhhh-----------hh-hc-c----------CCCHHHHHHHHHHcCCCc-hhCCCHH
Confidence 9999999999997632111 00000 00 00 0 112347889999999999 9999999
Q ss_pred HHHh
Q 045539 888 WIFS 891 (897)
Q Consensus 888 evl~ 891 (897)
|+++
T Consensus 356 e~l~ 359 (377)
T 3byv_A 356 QAME 359 (377)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9986
No 238
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.1e-38 Score=349.60 Aligned_cols=263 Identities=22% Similarity=0.335 Sum_probs=204.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 693 (897)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 368999999999999999999876 68999999987542 3445788999999999999999999999999999999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCc
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST-PIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 772 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~-~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~ 772 (897)
|+++++|.+++.... .+++..+..++.|++.||+|| |+. ||+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~l---h~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYL---REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999987654 589999999999999999999 664 9999999999999999999999999998765322
Q ss_pred eeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHh-------------------
Q 045539 773 LSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWI------------------- 833 (897)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~------------------- 833 (897)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--ELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHH--HHHHC------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHhcccccccCCCCCCCcccCC
Confidence 12345689999999999999999999999999999999999999975321110 0000
Q ss_pred --------hhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 834 --------NDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 834 --------~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
....+....+.++........... ......++.+++.+||+.|| ++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP-~~Rpt~~ell~ 324 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLP--SGVFSLEFQDFVNKCLIKNP-AERADLKQLMV 324 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCC--TTTSCHHHHHHHHHHHCSST-TTSCCHHHHHT
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCC--cccccHHHHHHHHHHhhcCh-hhCCCHHHHhh
Confidence 000001112222221111111000 01123468899999999999 99999999986
No 239
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5e-38 Score=343.95 Aligned_cols=252 Identities=26% Similarity=0.416 Sum_probs=199.2
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCce--EEEEEechhh-HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGME--VAVKVFHQQY-ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 690 (897)
.++|++.+.||+|+||.||+|+.. +|.. ||+|+++... ....+.+.+|+++++++ +||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 368999999999999999999865 4664 4999887532 33456788999999999 89999999999999999999
Q ss_pred EEEeccCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc
Q 045539 691 IMKYMPNGSLENCLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV 755 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~ 755 (897)
||||+++++|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCccceEEEcCCCe
Confidence 999999999999987653 4689999999999999999999 8899999999999999999999
Q ss_pred EEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhh
Q 045539 756 AHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWIN 834 (897)
Q Consensus 756 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 834 (897)
+||+|||+++..... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ..
T Consensus 181 ~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~----- 250 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--EL----- 250 (327)
T ss_dssp EEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HH-----
T ss_pred EEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--HH-----
Confidence 999999998743211 11223356889999999888889999999999999999998 99999753111 01
Q ss_pred hcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 835 DLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 835 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
.+.+......... ..+..++.+++.+||+.|| ++|||++|+++.|+
T Consensus 251 -------~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 251 -------YEKLPQGYRLEKP------LNCDDEVYDLMRQCWREKP-YERPSFAQILVSLN 296 (327)
T ss_dssp -------HHHGGGTCCCCCC------TTBCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred -------HHHhhcCCCCCCC------CCCCHHHHHHHHHHccCCh-hhCcCHHHHHHHHH
Confidence 1111111000000 0123457899999999999 99999999999875
No 240
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.1e-38 Score=340.70 Aligned_cols=262 Identities=24% Similarity=0.320 Sum_probs=185.2
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 4578999999999999999999865 68999999987543 334567889999999999999999999999999999999
Q ss_pred EeccCCChhHhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcc
Q 045539 693 KYMPNGSLENCLYS-------GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAK 765 (897)
Q Consensus 693 e~~~~gsL~~~l~~-------~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~ 765 (897)
||+++++|.+++.. ....+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL---HKNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999864 234589999999999999999999 78899999999999999999999999999987
Q ss_pred ccCCCCc---eeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchH
Q 045539 766 LLSGEDQ---LSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSV 841 (897)
Q Consensus 766 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 841 (897)
....... ........||+.|+|||+..+ ..++.++||||||+++|||++|+.||........ .........+...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 248 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSLE 248 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHHHHTSSCCCTT
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-HHHHhccCCCccc
Confidence 6643221 111234468999999998765 5688999999999999999999999976322111 1111111110000
Q ss_pred HHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 842 MEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 842 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
....+..... ....++.+++.+||+.|| ++|||++|+++
T Consensus 249 ~~~~~~~~~~----------~~~~~~~~li~~~l~~dp-~~Rps~~~ll~ 287 (303)
T 2vwi_A 249 TGVQDKEMLK----------KYGKSFRKMISLCLQKDP-EKRPTAAELLR 287 (303)
T ss_dssp C-----CCCC----------CCCHHHHHHHHHHCCSSG-GGSCCHHHHHT
T ss_pred cccccchhhh----------hhhHHHHHHHHHHccCCh-hhCcCHHHHhh
Confidence 0001111111 112357889999999999 99999999987
No 241
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=358.14 Aligned_cols=313 Identities=20% Similarity=0.178 Sum_probs=247.2
Q ss_pred ccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCC
Q 045539 86 FNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMP 165 (897)
Q Consensus 86 ~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p 165 (897)
++++ .+|..+. +++++|||++|++++..|..|.++++|++|+|++|++.+..|..|.++++|++|+|++|++++..+
T Consensus 21 ~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 97 (477)
T 2id5_A 21 KRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPL 97 (477)
T ss_dssp CCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCT
T ss_pred CCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCc
Confidence 3444 5666553 588999999999998888899999999999999999998889999999999999999999986555
Q ss_pred ccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCC
Q 045539 166 REIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNAS 245 (897)
Q Consensus 166 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 245 (897)
..|+++++|++|+|++|+++++.+..|.++++|++|+|++|++++..| ..+..+++|++|+|++|.+++..+..+.+++
T Consensus 98 ~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 176 (477)
T 2id5_A 98 GVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH-RAFSGLNSLEQLTLEKCNLTSIPTEALSHLH 176 (477)
T ss_dssp TSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECT-TSSTTCTTCCEEEEESCCCSSCCHHHHTTCT
T ss_pred ccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeCh-hhccCCCCCCEEECCCCcCcccChhHhcccC
Confidence 678899999999999999999988899999999999999999984444 4455789999999999999887777889999
Q ss_pred cccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccC
Q 045539 246 KLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNC 325 (897)
Q Consensus 246 ~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n 325 (897)
+|+.|+|++|.+.+..+.. +..+++|++|++++|++.+.+|...
T Consensus 177 ~L~~L~l~~n~i~~~~~~~---------------------~~~l~~L~~L~l~~~~~~~~~~~~~--------------- 220 (477)
T 2id5_A 177 GLIVLRLRHLNINAIRDYS---------------------FKRLYRLKVLEISHWPYLDTMTPNC--------------- 220 (477)
T ss_dssp TCCEEEEESCCCCEECTTC---------------------SCSCTTCCEEEEECCTTCCEECTTT---------------
T ss_pred CCcEEeCCCCcCcEeChhh---------------------cccCcccceeeCCCCccccccCccc---------------
Confidence 9999999999988776654 4567889999999988766544332
Q ss_pred CCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCc
Q 045539 326 SISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPS 405 (897)
Q Consensus 326 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 405 (897)
....+|++|++++|+++++.+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..|.
T Consensus 221 ----------~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 290 (477)
T 2id5_A 221 ----------LYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPY 290 (477)
T ss_dssp ----------TTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTT
T ss_pred ----------ccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHH
Confidence 2233677777777777765556677777777777777777766666777777777777777777777777
Q ss_pred ccccccccceeccccccccCCccccccccccceEEeecCCccc
Q 045539 406 CLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLN 448 (897)
Q Consensus 406 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 448 (897)
.|.++++|+.|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 291 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 291 AFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp TBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred HhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 7777777777777777777666666777777776666666554
No 242
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.2e-37 Score=346.27 Aligned_cols=269 Identities=20% Similarity=0.228 Sum_probs=201.5
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCC-----C
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSND-----D 686 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 686 (897)
...++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 34568999999999999999999865 68899999987433 34457889999999999999999999998654 4
Q ss_pred ceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 687 FKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 687 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
..|+||||++ ++|.+++.... +++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+..
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~~--~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQH--LSNDHICYFLYQILRGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEcccC-cCHHHHHHhCC--CCHHHHHHHHHHHHHHHHHH---HHCCeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 6899999996 58999887754 89999999999999999999 889999999999999999999999999999987
Q ss_pred cCCCCcee-eeeccccCcccCCcCccC-CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchH---
Q 045539 767 LSGEDQLS-IQIQTLATIGYMAPEYGT-KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSV--- 841 (897)
Q Consensus 767 ~~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 841 (897)
........ ......||+.|+|||++. ...++.++||||+||++|||++|+.||...... .....+........
T Consensus 178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL--DQLNHILGILGSPSQED 255 (364)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG--GHHHHHHHHHCSCCHHH
T ss_pred cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH--HHHHHHHHHhCCCCHHH
Confidence 64322111 123457999999999754 455899999999999999999999999763211 11111111100000
Q ss_pred ---------HHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 842 ---------MEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 842 ---------~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
........................++.+++.+|++.|| ++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~R~t~~e~l~ 313 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNP-HKRIEVEQALA 313 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSST-TTSCCHHHHHT
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCCh-hhCCCHHHHhc
Confidence 00000000000000000011223567899999999999 99999999986
No 243
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.2e-37 Score=340.12 Aligned_cols=252 Identities=23% Similarity=0.294 Sum_probs=197.1
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--------HHHHHHHHHHHHHHHhcCCCccceEeeeecCC
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--------ERALKSFEDECEVMKRIRHRNLVKIISSCSND 685 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 685 (897)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4568999999999999999999875 58899999986432 12234578999999999999999999999776
Q ss_pred CceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc---EEEeecc
Q 045539 686 DFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV---AHISDFG 762 (897)
Q Consensus 686 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~---~kL~DFg 762 (897)
+ .|+||||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred c-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 5 799999999999999887654 589999999999999999999 7899999999999999987654 9999999
Q ss_pred CccccCCCCceeeeeccccCcccCCcCcc---CCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCc
Q 045539 763 IAKLLSGEDQLSIQIQTLATIGYMAPEYG---TKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPV 839 (897)
Q Consensus 763 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 839 (897)
++....... ......||+.|+|||++ ....++.++|||||||++|+|++|+.||....... .....+..
T Consensus 163 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~---- 234 (322)
T 2ycf_A 163 HSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITS---- 234 (322)
T ss_dssp TCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHH----
T ss_pred cceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHh----
Confidence 998764322 12234689999999985 35678999999999999999999999997532221 11111111
Q ss_pred hHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 840 SVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 840 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
...... .........++.+++.+|++.|| ++|||++|+++
T Consensus 235 --------~~~~~~---~~~~~~~~~~~~~li~~~l~~dP-~~Rps~~~~l~ 274 (322)
T 2ycf_A 235 --------GKYNFI---PEVWAEVSEKALDLVKKLLVVDP-KARFTTEEALR 274 (322)
T ss_dssp --------TCCCCC---HHHHTTSCHHHHHHHHHHSCSST-TTSCCHHHHHT
T ss_pred --------CccccC---chhhhhcCHHHHHHHHHHcccCH-hhCCCHHHHhh
Confidence 000000 01112234568899999999999 99999999986
No 244
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=6.4e-38 Score=335.82 Aligned_cols=244 Identities=23% Similarity=0.360 Sum_probs=200.9
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecC---------
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSN--------- 684 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 684 (897)
..++|++.+.||+|+||.||+|++. +|+.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4568999999999999999999876 79999999987543 346789999999999999999998854
Q ss_pred -------CCceEEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcE
Q 045539 685 -------DDFKALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVA 756 (897)
Q Consensus 685 -------~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~ 756 (897)
....++||||+++++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYI---HSKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCCHHHEEEcCCCCE
Confidence 445799999999999999997543 5689999999999999999999 78899999999999999999999
Q ss_pred EEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhc
Q 045539 757 HISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDL 836 (897)
Q Consensus 757 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 836 (897)
||+|||.+........ .....||+.|+|||++.+..++.++||||||+++|||++|..|+.... ..
T Consensus 162 kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~---- 227 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KF---- 227 (284)
T ss_dssp EECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HH----
T ss_pred EECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HH----
Confidence 9999999987654322 234468999999999988889999999999999999999999875411 00
Q ss_pred CCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 837 LPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 837 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
...+....+... ....+.+++.+||+.|| ++|||++|+++.|+
T Consensus 228 ----~~~~~~~~~~~~----------~~~~~~~li~~~l~~dp-~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 228 ----FTDLRDGIISDI----------FDKKEKTLLQKLLSKKP-EDRPNTSEILRTLT 270 (284)
T ss_dssp ----HHHHHTTCCCTT----------SCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred ----HHHhhccccccc----------CCHHHHHHHHHHccCCh-hhCcCHHHHHHHHH
Confidence 011111111111 12346789999999999 99999999999874
No 245
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.4e-37 Score=342.27 Aligned_cols=262 Identities=21% Similarity=0.224 Sum_probs=192.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCC------
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDD------ 686 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 686 (897)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999865 68999999987532 344577889999999999999999999997654
Q ss_pred ceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 687 FKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 687 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
..|+||||+++ +|.+.+.. .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 67999999964 78887753 388999999999999999999 789999999999999999999999999999986
Q ss_pred cCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhc----------
Q 045539 767 LSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDL---------- 836 (897)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~---------- 836 (897)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+...+...
T Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 177 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHC-CCCCCHHHHTT
T ss_pred ccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHH
Confidence 54321 223456899999999999889999999999999999999999999753211 0111111000
Q ss_pred CCchHH---------------HHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 837 LPVSVM---------------EVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 837 ~~~~~~---------------~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
...... .......... ..........++.+++.+|++.|| ++|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~mL~~dP-~~R~t~~e~l~h 319 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPA---DSEHNKLKASQARDLLSKMLVIDA-SKRISVDEALQH 319 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCC---SSHHHHHHHHHHHHHHHHHSCSSG-GGSCCHHHHHHS
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcc---cccccccccHHHHHHHHHHCcCCh-hhCCCHHHHhCC
Confidence 000000 0000000000 011122335678999999999999 999999999863
No 246
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=337.30 Aligned_cols=267 Identities=22% Similarity=0.284 Sum_probs=195.2
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeec-----------
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCS----------- 683 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 683 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 468999999999999999999876 48999999998666666788999999999999999999999873
Q ss_pred ---CCCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeC-CCCcEEEe
Q 045539 684 ---NDDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLD-EDMVAHIS 759 (897)
Q Consensus 684 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~-~~~~~kL~ 759 (897)
+....++||||++ ++|.+++..+ .+++..+..++.|++.||+|| |++||+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYI---HSANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999997 6999998764 489999999999999999999 789999999999999997 56799999
Q ss_pred eccCccccCCCCc-eeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcC
Q 045539 760 DFGIAKLLSGEDQ-LSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLL 837 (897)
Q Consensus 760 DFg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 837 (897)
|||.+........ ........+|..|+|||.... ..++.++||||||+++|||++|+.||...... .....+....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~ 241 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--EQMQLILESI 241 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHS
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhc
Confidence 9999987643211 112234457999999997654 67899999999999999999999999763211 1111111111
Q ss_pred Cch----HHHHhh-------hhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 838 PVS----VMEVID-------TNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 838 ~~~----~~~~i~-------~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
+.. ..++.. ...................++.+++.+|++.|| ++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~ell~ 305 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSP-MDRLTAEEALS 305 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSG-GGSCCHHHHHT
T ss_pred CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCc-cccCCHHHHhC
Confidence 110 011100 000000000001111234668999999999999 99999999986
No 247
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2e-37 Score=336.94 Aligned_cols=261 Identities=19% Similarity=0.296 Sum_probs=199.3
Q ss_pred CCHHHHHHHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechh--hHHHHHHHHHHHHHHHhcC--CCccceEeeee
Q 045539 607 FSYHELLRATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQ--YERALKSFEDECEVMKRIR--HRNLVKIISSC 682 (897)
Q Consensus 607 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~ 682 (897)
+.++.+....++|++.+.||+|+||.||+|...+++.||+|++... .....+.+.+|++++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 3333444456789999999999999999999888999999998643 2445678899999999997 59999999999
Q ss_pred cCCCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeecc
Q 045539 683 SNDDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFG 762 (897)
Q Consensus 683 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg 762 (897)
.+++..++||| +.+++|.+++.... .+++.++..++.|+++||+|| |++||+||||||+||++++ +.+||+|||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~-~~~kL~Dfg 171 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIVD-GMLKLIDFG 171 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcccEEEEC-CeEEEeecc
Confidence 99999999999 56889999998765 589999999999999999999 7889999999999999964 899999999
Q ss_pred CccccCCCCceeeeeccccCcccCCcCccCC-----------CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhH
Q 045539 763 IAKLLSGEDQLSIQIQTLATIGYMAPEYGTK-----------GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNR 831 (897)
Q Consensus 763 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~ 831 (897)
++................||+.|+|||++.. ..++.++||||||+++|||++|+.||.........
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~--- 248 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--- 248 (313)
T ss_dssp SSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---
T ss_pred ccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH---
Confidence 9987654433223334568999999998765 47888999999999999999999999753211111
Q ss_pred HhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 832 WINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 832 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
....++.......+. ....++.+++.+||+.|| ++|||++|+++.
T Consensus 249 ---------~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dp-~~Rps~~ell~h 293 (313)
T 3cek_A 249 ---------LHAIIDPNHEIEFPD------IPEKDLQDVLKCCLKRDP-KQRISIPELLAH 293 (313)
T ss_dssp ---------HHHHHCTTSCCCCCC------CSCHHHHHHHHHHTCSST-TTSCCHHHHHTS
T ss_pred ---------HHHHHhcccccCCcc------cchHHHHHHHHHHccCCc-ccCcCHHHHhcC
Confidence 111222111111110 112357889999999999 999999999863
No 248
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.7e-37 Score=341.35 Aligned_cols=263 Identities=20% Similarity=0.263 Sum_probs=204.6
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHH-----------------HHHHHHHHHHHHhcCCCccceE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERA-----------------LKSFEDECEVMKRIRHRNLVKI 678 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 678 (897)
.++|++.+.||+|+||.||+|+. +|+.||+|++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999998 89999999997654321 1788999999999999999999
Q ss_pred eeeecCCCceEEEEEeccCCChhHh------hhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcEeCCCCCCCeee
Q 045539 679 ISSCSNDDFKALIMKYMPNGSLENC------LYSG-TCMLDIFQRLNIMIDVALALEYLHFGHS-TPIIHCDLKPSNVLL 750 (897)
Q Consensus 679 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~-~~~~~~~~~~~i~~~i~~~L~~Lh~~h~-~~ivH~Dlkp~NIll 750 (897)
++++.+++..++||||+++++|.++ +... ...+++..+..++.|++.||+|| |+ +||+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI---HNEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH---HHTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH---hccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5543 35699999999999999999999 76 999999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCC-CCCc-cchHHHHHHHHHHHHcCCCCCcccccCccc
Q 045539 751 DEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKG-RVCT-RGDVYSYGIMLMEMFTKKKPTDEIFIGELS 828 (897)
Q Consensus 751 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDv~slGvil~elltg~~p~~~~~~~~~~ 828 (897)
+.++.+||+|||.+...... ......|++.|+|||+..+. .++. ++||||||+++|||++|+.||....... .
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~ 260 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV-E 260 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH-H
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH-H
Confidence 99999999999999876433 23455799999999998877 6666 9999999999999999999997632211 1
Q ss_pred hhHHhhhc---CCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 829 LNRWINDL---LPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 829 ~~~~~~~~---~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..+.+... .+............... .........++.+++.+||+.|| ++|||++|+++
T Consensus 261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~L~~dP-~~Rps~~e~l~ 322 (348)
T 2pml_X 261 LFNNIRTKNIEYPLDRNHFLYPLTNKKS---TCSNNFLSNEDIDFLKLFLRKNP-AERITSEDALK 322 (348)
T ss_dssp HHHHHTSCCCCCCCSSSSSTTTTCC-----------CCCHHHHHHHHHHCCSSG-GGSCCHHHHHT
T ss_pred HHHHHhccCcCCccchhhhhcccccccc---ccchhhcCHHHHHHHHHHccCCh-hhCCCHHHHhc
Confidence 11111110 01000000000000000 00012234567899999999999 99999999987
No 249
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.8e-37 Score=368.15 Aligned_cols=244 Identities=20% Similarity=0.246 Sum_probs=200.4
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKA 689 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 689 (897)
..++|++.+.||+|+||.||+|+.. +++.||||++++.. ....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3578999999999999999999876 58899999998653 23346678899999988 6999999999999999999
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
+||||+++|+|.+++...+ .+++..+..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999988754 589999999999999999999 889999999999999999999999999999986432
Q ss_pred CCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhh
Q 045539 770 EDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNL 849 (897)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 849 (897)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .++....+
T Consensus 495 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----------------~~~~~~i~ 555 (674)
T 3pfq_A 495 DGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----------------DELFQSIM 555 (674)
T ss_dssp TTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------------HHHHHHHH
T ss_pred CCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----------------HHHHHHHH
Confidence 222 23456799999999999999999999999999999999999999976211 11111111
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCH
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADM 886 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~ 886 (897)
..... .+ .....++.+++.+|++.|| ++||++
T Consensus 556 ~~~~~-~p---~~~s~~~~~li~~lL~~dP-~~R~~~ 587 (674)
T 3pfq_A 556 EHNVA-YP---KSMSKEAVAICKGLMTKHP-GKRLGC 587 (674)
T ss_dssp SSCCC-CC---TTSCHHHHHHHHHHSCSSS-TTCTTC
T ss_pred hCCCC-CC---ccCCHHHHHHHHHHccCCH-HHCCCC
Confidence 11110 00 1223457899999999999 999997
No 250
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.3e-37 Score=341.63 Aligned_cols=263 Identities=21% Similarity=0.243 Sum_probs=197.3
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCce----
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFK---- 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 688 (897)
.++|.+.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999865 68999999997542 34457888999999999999999999999877654
Q ss_pred --EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 689 --ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 689 --~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
++||||++ ++|.+++.. .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999996 688877643 389999999999999999999 788999999999999999999999999999986
Q ss_pred cCCCCceeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhh----------
Q 045539 767 LSGEDQLSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIND---------- 835 (897)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~---------- 835 (897)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+......
T Consensus 194 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 194 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHT
T ss_pred cccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHHHHH
Confidence 5422 234568999999998876 67899999999999999999999999753211 011111100
Q ss_pred cCCch-HHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 836 LLPVS-VMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 836 ~~~~~-~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
..... ....+.....................+.+++.+|++.|| ++|||++|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~ell~h 324 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDV-DKRLTAAQALTH 324 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCT-TTSCCHHHHHTS
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCCh-hhcCCHHHHhcC
Confidence 00000 111111111100000011111234568899999999999 999999999864
No 251
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.4e-37 Score=348.39 Aligned_cols=197 Identities=22% Similarity=0.307 Sum_probs=172.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhc------CCCccceEeeeecCCCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRI------RHRNLVKIISSCSNDDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 688 (897)
..+|++.+.||+|+||.||+|+.. +++.||||+++.. ....+.+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 468999999999999999999765 5899999999764 33346677888888887 477999999999999999
Q ss_pred EEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc--EEEeeccCcc
Q 045539 689 ALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV--AHISDFGIAK 765 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~--~kL~DFg~a~ 765 (897)
++||||+. ++|.+++.... ..+++..+..++.||+.||+|| |++||+||||||+||+++.++. +||+|||+|.
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL---HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999995 68988887654 4589999999999999999999 7889999999999999999887 9999999997
Q ss_pred ccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCccc
Q 045539 766 LLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEI 822 (897)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~ 822 (897)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 251 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 65432 22456899999999999989999999999999999999999999763
No 252
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.1e-37 Score=335.08 Aligned_cols=254 Identities=22% Similarity=0.295 Sum_probs=193.0
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecC---------
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSN--------- 684 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 684 (897)
..++|++.+.||+|+||.||+|+.. +|+.||+|++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 4578999999999999999999875 6899999998754 3445788999999999999999999998754
Q ss_pred ----CCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEee
Q 045539 685 ----DDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISD 760 (897)
Q Consensus 685 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~D 760 (897)
.+..|+||||+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI---HSQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHH---HhCCeecccCCHHhEEEcCCCCEEEee
Confidence 4567999999999999999987766788999999999999999999 788999999999999999999999999
Q ss_pred ccCccccCCCCc------------eeeeeccccCcccCCcCccCCC-CCCccchHHHHHHHHHHHHcCCCCCcccccCcc
Q 045539 761 FGIAKLLSGEDQ------------LSIQIQTLATIGYMAPEYGTKG-RVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGEL 827 (897)
Q Consensus 761 Fg~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvil~elltg~~p~~~~~~~~~ 827 (897)
||.+........ ........||+.|+|||++.+. .++.++|||||||++|||++ ||.......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~- 235 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV- 235 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH-
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHH-
Confidence 999986542210 1122345689999999988754 68999999999999999998 554311110
Q ss_pred chhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 828 SLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 828 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
.....+ .......+... .......+.+++.+||+.|| ++|||++|+++.
T Consensus 236 ~~~~~~------------~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp-~~Rps~~~ll~h 284 (303)
T 1zy4_A 236 NILKKL------------RSVSIEFPPDF---DDNKMKVEKKIIRLLIDHDP-NKRPGARTLLNS 284 (303)
T ss_dssp HHHHHH------------HSTTCCCCTTC---CTTTSHHHHHHHHHHTCSSG-GGSCCHHHHHHS
T ss_pred HHHHhc------------cccccccCccc---cccchHHHHHHHHHHHhcCc-ccCcCHHHHhCC
Confidence 000000 00000000000 01223447889999999999 999999999873
No 253
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.5e-37 Score=367.84 Aligned_cols=247 Identities=23% Similarity=0.354 Sum_probs=195.9
Q ss_pred CeeecccceEEEEEEec---CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEEEeccC
Q 045539 623 NLIGIGSFGSIYVARLQ---DGMEVAVKVFHQQYE--RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIMKYMPN 697 (897)
Q Consensus 623 ~~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 697 (897)
+.||+|+||.||+|.+. .++.||||+++.... ...+.+.+|++++++++||||+++++++.+ +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 467899999986532 345789999999999999999999999975 457899999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCce-eee
Q 045539 698 GSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL-SIQ 776 (897)
Q Consensus 698 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~-~~~ 776 (897)
|+|.+++.... .+++.++..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++........ ...
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yL---H~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHH---HHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999997654 589999999999999999999 7899999999999999999999999999999876543321 222
Q ss_pred eccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhh
Q 045539 777 IQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEER 855 (897)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 855 (897)
....+|+.|+|||++....++.++|||||||++|||++ |+.||...... ...+.+........+
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------------~~~~~i~~~~~~~~p- 594 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------------EVTAMLEKGERMGCP- 594 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------------HHHHHHHTTCCCCCC-
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------------HHHHHHHcCCCCCCC-
Confidence 33456789999999988899999999999999999998 99999763211 111222211111111
Q ss_pred hHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 856 FFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 856 ~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
..+..++.+++.+||+.|| ++|||+++|+++|++
T Consensus 595 -----~~~~~~l~~li~~cl~~dP-~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 595 -----AGCPREMYDLMNLCWTYDV-ENRPGFAAVELRLRN 628 (635)
T ss_dssp -----TTCCHHHHHHHHHHTCSST-TTSCCHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHcCCCH-hHCcCHHHHHHHHHH
Confidence 1233568899999999999 999999999998863
No 254
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-38 Score=346.95 Aligned_cols=254 Identities=22% Similarity=0.293 Sum_probs=199.8
Q ss_pred hcCCCcCCeeecccceEEEEEEe----cCCceEEEEEechhh----HHHHHHHHHHHHHHHhc-CCCccceEeeeecCCC
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL----QDGMEVAVKVFHQQY----ERALKSFEDECEVMKRI-RHRNLVKIISSCSNDD 686 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 686 (897)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++.+++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999987 368999999986432 12335567899999999 6999999999999999
Q ss_pred ceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 687 FKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 687 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
..++||||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHL---HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999987654 589999999999999999999 789999999999999999999999999999986
Q ss_pred cCCCCceeeeeccccCcccCCcCccCC--CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHH
Q 045539 767 LSGEDQLSIQIQTLATIGYMAPEYGTK--GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEV 844 (897)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (897)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .. .++
T Consensus 209 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~------------~~~ 274 (355)
T 1vzo_A 209 FVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQ------------AEI 274 (355)
T ss_dssp CCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CH------------HHH
T ss_pred cccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hH------------HHH
Confidence 542221 12234579999999999875 457899999999999999999999997532111 11 111
Q ss_pred hhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCC-----CHHHHHhh
Q 045539 845 IDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGA-----DMGWIFSA 892 (897)
Q Consensus 845 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RP-----t~~evl~~ 892 (897)
........+. .. ......+.+++.+||+.|| ++|| |++|+++.
T Consensus 275 ~~~~~~~~~~-~~---~~~~~~~~~li~~~L~~dP-~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 275 SRRILKSEPP-YP---QEMSALAKDLIQRLLMKDP-KKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHHCCCC-CC---TTSCHHHHHHHHHHTCSSG-GGSTTSSTTTHHHHHTS
T ss_pred HHHHhccCCC-CC---cccCHHHHHHHHHHhhhCH-HHhcCCCCCCHHHHHcC
Confidence 1111111000 00 1223457889999999999 9999 99999874
No 255
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.6e-37 Score=332.68 Aligned_cols=268 Identities=21% Similarity=0.290 Sum_probs=200.0
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE--RALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 368999999999999999999876 689999999875432 23467889999999999999999999999999999999
Q ss_pred EeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 693 KYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
||++ ++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 9997 69999887654 4589999999999999999999 78899999999999999999999999999998764332
Q ss_pred ceeeeeccccCcccCCcCccCCCC-CCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcC-Cch-H-HHH---
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGR-VCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLL-PVS-V-MEV--- 844 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~-~-~~~--- 844 (897)
. ......+|+.|+|||+..+.. ++.++||||||+++|||++|+.||......+ ...+...... +.. . ...
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 158 R--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp B--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGS
T ss_pred c--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhcC
Confidence 1 122346899999999887655 7899999999999999999999997632111 1111111000 000 0 000
Q ss_pred --hhhhhcchh-hhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 845 --IDTNLLRGE-ERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 845 --i~~~l~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
......... ............++.+++.+|++.|| ++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~~~l~ 283 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP-NKRISAKAALA 283 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSST-TTSCCHHHHHT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCc-ccCCCHHHHhc
Confidence 000000000 00000111233567899999999999 99999999987
No 256
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.8e-37 Score=341.83 Aligned_cols=200 Identities=25% Similarity=0.318 Sum_probs=172.9
Q ss_pred HHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CC-----ccceEeeeecCCC
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIR-HR-----NLVKIISSCSNDD 686 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~ 686 (897)
...++|++.+.||+|+||+||+|+.. +++.||||+++.. ....+.+.+|+++++.++ |+ +|+++++++..++
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 44679999999999999999999876 6889999999754 333466778999998885 55 4999999999999
Q ss_pred ceEEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeC--CCCcEEEeeccC
Q 045539 687 FKALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLD--EDMVAHISDFGI 763 (897)
Q Consensus 687 ~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~--~~~~~kL~DFg~ 763 (897)
..++||||++ ++|.+++.... ..+++..+..++.|++.||+|||. |+.||+||||||+||+++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999996 59999887664 568999999999999999999953 478999999999999994 577899999999
Q ss_pred ccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcc
Q 045539 764 AKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDE 821 (897)
Q Consensus 764 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~ 821 (897)
++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 208 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 208 SCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9876432 2245689999999999999999999999999999999999999975
No 257
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.1e-37 Score=341.08 Aligned_cols=251 Identities=21% Similarity=0.263 Sum_probs=195.8
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHH-HHhcCCCccceEeeeecCCCceEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEV-MKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
..++|++.+.||+|+||.||+|+.. +|+.||||+++... ......+..|..+ ++.++||||+++++++.+++..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 3568999999999999999999864 68999999987542 2233455555555 7778999999999999999999999
Q ss_pred EEeccCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 692 MKYMPNGSLENCLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHST-PIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~-~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
|||+++ +|.+++.. ....+++..+..++.||+.||+|| |++ ||+||||||+||+++.++.+||+|||++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~l---H~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL---HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 89888764 445699999999999999999999 665 9999999999999999999999999999876
Q ss_pred CCCCceeeeeccccCcccCCcCccC----CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHH
Q 045539 768 SGEDQLSIQIQTLATIGYMAPEYGT----KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVME 843 (897)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (897)
.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||.........+ ..
T Consensus 205 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~------------~~ 269 (340)
T 3an0_A 205 VDSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL------------KQ 269 (340)
T ss_dssp SCHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH------------HH
T ss_pred cccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHH------------HH
Confidence 4321 122346999999999853 4478999999999999999999999997521111111 11
Q ss_pred HhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 844 VIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 844 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.+.......+. ..+..++.+++.+||+.|| ++|||++|+++
T Consensus 270 ~~~~~~~~~~~------~~~~~~~~~li~~~l~~dp-~~Rps~~ell~ 310 (340)
T 3an0_A 270 VVEEPSPQLPA------DKFSAEFVDFTSQCLKKNS-KERPTYPELMQ 310 (340)
T ss_dssp HHHSCCCCCCG------GGSCHHHHHHHHHHTCSSG-GGSCCHHHHTT
T ss_pred HhcCCCCCCCc------ccCCHHHHHHHHHHccCCc-ccCcCHHHHhc
Confidence 11111100010 1123457899999999999 99999999986
No 258
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=8.6e-37 Score=343.84 Aligned_cols=257 Identities=20% Similarity=0.232 Sum_probs=198.6
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcC--------CCccceEeeeec---
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIR--------HRNLVKIISSCS--- 683 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 683 (897)
.++|++.+.||+|+||.||+|+.. +++.||||+++.. ....+.+.+|++++++++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 478999999999999999999865 6889999999754 334567889999999996 788999999987
Q ss_pred -CCCceEEEEEeccCCChhHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEeCCCCCCCeeeCCCC------
Q 045539 684 -NDDFKALIMKYMPNGSLENCLY-SGTCMLDIFQRLNIMIDVALALEYLHFGHST-PIIHCDLKPSNVLLDEDM------ 754 (897)
Q Consensus 684 -~~~~~~lv~e~~~~gsL~~~l~-~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~-~ivH~Dlkp~NIll~~~~------ 754 (897)
++...++||||+ ++++.+++. .....+++..+..++.||+.||+|| |++ ||+||||||+||+++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYL---HTKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHhCCEecCCCCHHHeeEeccchhhhhh
Confidence 567889999999 455555554 4335699999999999999999999 777 999999999999999775
Q ss_pred -------------------------------------------cEEEeeccCccccCCCCceeeeeccccCcccCCcCcc
Q 045539 755 -------------------------------------------VAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYG 791 (897)
Q Consensus 755 -------------------------------------------~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~ 791 (897)
.+||+|||.+...... .....||+.|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 7999999999876432 2345689999999999
Q ss_pred CCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccc----hhHHhhh---cCCch------------------------
Q 045539 792 TKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELS----LNRWIND---LLPVS------------------------ 840 (897)
Q Consensus 792 ~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~----~~~~~~~---~~~~~------------------------ 840 (897)
.+..++.++|||||||++|||++|+.||......... ....+.. ..+..
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 8889999999999999999999999999753322110 0000000 00100
Q ss_pred ----HHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 841 ----VMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 841 ----~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..+.+.... ....+....+.+++.+||+.|| ++|||++|+++
T Consensus 346 ~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~e~l~ 391 (397)
T 1wak_A 346 KPWGLFEVLVEKY--------EWSQEEAAGFTDFLLPMLELIP-EKRATAAECLR 391 (397)
T ss_dssp CCCCHHHHHHHTS--------CCCHHHHHHHHHHHGGGGCSSG-GGSCCHHHHHT
T ss_pred CCcchhHhhhhhc--------ccchhhHHHHHHHHHHHhccCh-hhcCCHHHHhh
Confidence 000000000 0112445678999999999999 99999999986
No 259
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.2e-36 Score=334.75 Aligned_cols=265 Identities=17% Similarity=0.237 Sum_probs=202.1
Q ss_pred hcCCCcCCeeecccceEEEEEEe-c-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCC------ccceEeeeecCCCc
Q 045539 616 TDRFSENNLIGIGSFGSIYVARL-Q-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHR------NLVKIISSCSNDDF 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~ 687 (897)
.++|++.+.||+|+||.||+|.. . +++.||+|+++.. ....+.+.+|+++++.++|+ +++++++++.+++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999986 3 6889999999754 33456788999999999765 49999999999999
Q ss_pred eEEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC--------------
Q 045539 688 KALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE-------------- 752 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~-------------- 752 (897)
.++||||+ +++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL---HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999887665 4689999999999999999999 7899999999999999987
Q ss_pred -----CCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCcc
Q 045539 753 -----DMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGEL 827 (897)
Q Consensus 753 -----~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~ 827 (897)
++.+||+|||.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 242 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred cccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 668999999999865432 2245689999999999988999999999999999999999999975321110
Q ss_pred -chhHHhhhcCCchHHHH-----------------------hhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCC
Q 045539 828 -SLNRWINDLLPVSVMEV-----------------------IDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNG 883 (897)
Q Consensus 828 -~~~~~~~~~~~~~~~~~-----------------------i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~R 883 (897)
..........+.....- +........ ...........++.+++.+||+.|| ++|
T Consensus 243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~L~~dP-~~R 320 (339)
T 1z57_A 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK-EFMLSQDVEHERLFDLIQKMLEYDP-AKR 320 (339)
T ss_dssp HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGG-GGCSCCSHHHHHHHHHHHHHTCSST-TTS
T ss_pred HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchh-hhcccchhhHHHHHHHHHHHhCcCc-ccc
Confidence 00000111111111000 000000000 0000011234668999999999999 999
Q ss_pred CCHHHHHhh
Q 045539 884 ADMGWIFSA 892 (897)
Q Consensus 884 Pt~~evl~~ 892 (897)
||++|+++.
T Consensus 321 pt~~ell~h 329 (339)
T 1z57_A 321 ITLREALKH 329 (339)
T ss_dssp CCHHHHTTS
T ss_pred cCHHHHhcC
Confidence 999999863
No 260
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.1e-37 Score=347.34 Aligned_cols=254 Identities=12% Similarity=0.078 Sum_probs=181.8
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc--CCCccceEe-------eee
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRI--RHRNLVKII-------SSC 682 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~ 682 (897)
..+|...+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 346889999999999999999875 68999999998643 34456778886555555 599988755 333
Q ss_pred cCC-----------------CceEEEEEeccCCChhHhhhcCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCcE
Q 045539 683 SND-----------------DFKALIMKYMPNGSLENCLYSGTCMLDIFQR------LNIMIDVALALEYLHFGHSTPII 739 (897)
Q Consensus 683 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~------~~i~~~i~~~L~~Lh~~h~~~iv 739 (897)
..+ ...|+||||++ ++|.+++......+++..+ ..++.|++.||+|| |++||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~L---H~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANL---QSKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHH---HHTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHH---HHCCCc
Confidence 222 33799999998 8999999875444555566 77889999999999 889999
Q ss_pred eCCCCCCCeeeCCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCC--CCCCccchHHHHHHHHHHHHcCCC
Q 045539 740 HCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTK--GRVCTRGDVYSYGIMLMEMFTKKK 817 (897)
Q Consensus 740 H~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~slGvil~elltg~~ 817 (897)
||||||+||+++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999987542 1224567899999999877 678999999999999999999999
Q ss_pred CCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 818 PTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 818 p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
||.......... +..... ......... ++....+...+.+++.+||+.|| ++|||++|+++
T Consensus 292 Pf~~~~~~~~~~--~~~~~~----~~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKGS--WKRPSL----RVPGTDSLA------FGSCTPLPDFVKTLIGRFLNFDR-RRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTTC--CCBCCT----TSCCCCSCC------CTTSSCCCHHHHHHHHHHTCSST-TTCCCHHHHTT
T ss_pred CCCCcCcccccc--hhhhhh----hhccccccc------hhhccCCCHHHHHHHHHHcCCCh-hhCCCHHHHhc
Confidence 998743221110 000000 000000000 00001223457899999999999 99999999975
No 261
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.8e-37 Score=331.45 Aligned_cols=251 Identities=20% Similarity=0.273 Sum_probs=200.7
Q ss_pred HhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4578999999999999999999876 68999999987543 23457788999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCC---CcEEEeeccCccccC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDED---MVAHISDFGIAKLLS 768 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~---~~~kL~DFg~a~~~~ 768 (897)
|||+++++|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.+ +.+||+|||.+....
T Consensus 100 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999886554 589999999999999999999 78999999999999999754 479999999998765
Q ss_pred CCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 769 GEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
.... .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||...... .... .+....
T Consensus 176 ~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~-----------~~~~~~ 238 (287)
T 2wei_A 176 QNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILK-----------RVETGK 238 (287)
T ss_dssp CCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-----------HHHHCC
T ss_pred CCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHH-----------HHHcCC
Confidence 3322 123458999999998765 4899999999999999999999999753111 1101 011100
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..... +.......++.+++.+|++.|| ++|||++|+++
T Consensus 239 ~~~~~----~~~~~~~~~~~~li~~~l~~dp-~~Rps~~ell~ 276 (287)
T 2wei_A 239 YAFDL----PQWRTISDDAKDLIRKMLTFHP-SLRITATQCLE 276 (287)
T ss_dssp CCCCS----GGGTTSCHHHHHHHHHHTCSSG-GGSCCHHHHHH
T ss_pred CCCCc----hhhhhcCHHHHHHHHHHcccCh-hhCcCHHHHhc
Confidence 00000 0011223457899999999999 99999999986
No 262
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.3e-37 Score=343.29 Aligned_cols=264 Identities=21% Similarity=0.248 Sum_probs=193.6
Q ss_pred HHHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecC-------
Q 045539 613 LRATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSN------- 684 (897)
Q Consensus 613 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 684 (897)
....++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345679999999999999999999864 699999999865422 23479999999999999999999833
Q ss_pred -------------------------------CCceEEEEEeccCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHH
Q 045539 685 -------------------------------DDFKALIMKYMPNGSLENCLYS---GTCMLDIFQRLNIMIDVALALEYL 730 (897)
Q Consensus 685 -------------------------------~~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~L 730 (897)
+...++||||++ ++|.+.+.. ....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334889999997 577776653 335699999999999999999999
Q ss_pred HhcCCCCcEeCCCCCCCeeeC-CCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCC-CCCccchHHHHHHH
Q 045539 731 HFGHSTPIIHCDLKPSNVLLD-EDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKG-RVCTRGDVYSYGIM 808 (897)
Q Consensus 731 h~~h~~~ivH~Dlkp~NIll~-~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvi 808 (897)
|++||+||||||+||+++ .++.+||+|||+|+....... .....||+.|+|||++.+. .++.++||||+||+
T Consensus 158 ---H~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 158 ---HSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp ---HTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred ---HHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 899999999999999997 688999999999987654332 2345689999999987664 58999999999999
Q ss_pred HHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhh--hh--------h-cchhhhhHHHHHHHHHHHHHHHhHccCC
Q 045539 809 LMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVID--TN--------L-LRGEERFFAAKEQILLSVLNLATECTIE 877 (897)
Q Consensus 809 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~--------l-~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 877 (897)
+|||++|+.||...... ..+.+.+...-......+.. +. . ...... ...+....++.+++.+||+.
T Consensus 232 l~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~ 308 (383)
T 3eb0_A 232 FGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRK--ILPEGTPSLAIDLLEQILRY 308 (383)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHH--HSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHh--hCCCCCCHHHHHHHHHHccC
Confidence 99999999999763211 11111111111111111100 00 0 000000 00011234578999999999
Q ss_pred CCCCCCCCHHHHHh
Q 045539 878 SRDGNGADMGWIFS 891 (897)
Q Consensus 878 dP~~~RPt~~evl~ 891 (897)
|| ++|||+.|+++
T Consensus 309 dP-~~R~t~~e~l~ 321 (383)
T 3eb0_A 309 EP-DLRINPYEAMA 321 (383)
T ss_dssp SG-GGSCCHHHHHT
T ss_pred Ch-hhCCCHHHHhc
Confidence 99 99999999985
No 263
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=342.29 Aligned_cols=261 Identities=21% Similarity=0.290 Sum_probs=197.1
Q ss_pred ccCCHHHHHHHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCccceEeeee
Q 045539 605 RRFSYHELLRATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRI-RHRNLVKIISSC 682 (897)
Q Consensus 605 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 682 (897)
..+.+.++....++|++.+.||+|+||.||+|++. +|+.||+|++.... ...+.+.+|+++++++ +||||+++++++
T Consensus 12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 33444455556789999999999999999999874 68999999986542 2346788999999999 799999999999
Q ss_pred cC------CCceEEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc
Q 045539 683 SN------DDFKALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV 755 (897)
Q Consensus 683 ~~------~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~ 755 (897)
.. .+..++||||+++++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL---HQHKVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTCC
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCcHHHEEEcCCCC
Confidence 76 467899999999999999987653 4689999999999999999999 7889999999999999999999
Q ss_pred EEEeeccCccccCCCCceeeeeccccCcccCCcCccC-----CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchh
Q 045539 756 AHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGT-----KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLN 830 (897)
Q Consensus 756 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~ 830 (897)
+||+|||++....... .......||+.|+|||++. ...++.++|||||||++|+|++|+.||....... ..
T Consensus 168 ~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~ 243 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--AL 243 (326)
T ss_dssp EEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HH
T ss_pred EEEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HH
Confidence 9999999998654322 1223456899999999876 5678999999999999999999999996521110 00
Q ss_pred HHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 831 RWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 831 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
..+.......... ......+.+++.+||..|| ++|||++|+++
T Consensus 244 -----------~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~~ll~ 286 (326)
T 2x7f_A 244 -----------FLIPRNPAPRLKS------KKWSKKFQSFIESCLVKNH-SQRPATEQLMK 286 (326)
T ss_dssp -----------HHHHHSCCCCCSC------SCSCHHHHHHHHHHCCSSG-GGSCCHHHHHT
T ss_pred -----------HHhhcCccccCCc------cccCHHHHHHHHHHhccCh-hhCCCHHHHhh
Confidence 0000000000000 0112457899999999999 99999999987
No 264
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=6.5e-37 Score=339.04 Aligned_cols=268 Identities=20% Similarity=0.245 Sum_probs=199.4
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCC-----Cce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSND-----DFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 688 (897)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ......+.+|++++++++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 568999999999999999999876 68999999986432 34456788999999999999999999988654 678
Q ss_pred EEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccC
Q 045539 689 ALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 768 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~ 768 (897)
++||||++ ++|.+++... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVL---HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999996 6899988774 489999999999999999999 78999999999999999999999999999998765
Q ss_pred CCCcee--------eeeccccCcccCCcCccC-CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhh---h-
Q 045539 769 GEDQLS--------IQIQTLATIGYMAPEYGT-KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIN---D- 835 (897)
Q Consensus 769 ~~~~~~--------~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~---~- 835 (897)
...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||....... ....... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~ 242 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGTP 242 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCC
Confidence 322111 112346899999999764 4678999999999999999999999997632110 0000000 0
Q ss_pred --------cCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 836 --------LLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 836 --------~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.......+.+....................++.+++.+||+.|| ++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~ell~ 305 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP-AKRITAKEALE 305 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSG-GGSCCHHHHHT
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCc-ccCCCHHHHhc
Confidence 00000111111100000000001111334567899999999999 99999999987
No 265
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.7e-36 Score=334.99 Aligned_cols=274 Identities=21% Similarity=0.250 Sum_probs=188.4
Q ss_pred HHHHHHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCCC--
Q 045539 610 HELLRATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSNDD-- 686 (897)
Q Consensus 610 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 686 (897)
.+.....++|++.+.||+|+||.||+|+.. +|+.||||++.... .......+|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455677899999999999999999999875 68999999886542 22245567888889999999999999985433
Q ss_pred -----ceEEEEEeccCCChhHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC-CCcEE
Q 045539 687 -----FKALIMKYMPNGSLENCLY---SGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE-DMVAH 757 (897)
Q Consensus 687 -----~~~lv~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~-~~~~k 757 (897)
..++||||++++ +.+.+. .....+++..+..++.|++.||+|||. |++||+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEE
Confidence 378999999864 444332 234568999999999999999999942 3999999999999999996 89999
Q ss_pred EeeccCccccCCCCceeeeeccccCcccCCcCccCCC-CCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhc
Q 045539 758 ISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKG-RVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDL 836 (897)
Q Consensus 758 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 836 (897)
|+|||++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.......
T Consensus 173 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~ 248 (360)
T 3e3p_A 173 LCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVL 248 (360)
T ss_dssp ECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH
T ss_pred EeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHc
Confidence 999999987654332 2345689999999987654 4899999999999999999999999763211 1111111110
Q ss_pred C--CchHHHHhhhhhcc---------hhhh-hHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 837 L--PVSVMEVIDTNLLR---------GEER-FFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 837 ~--~~~~~~~i~~~l~~---------~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
. +......+.+.... .... ..........++.+++.+||+.|| ++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~e~l~ 314 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLP-EERMKPYEALC 314 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSG-GGSCCHHHHTT
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCc-cccCCHHHHhc
Confidence 0 00111111100000 0000 000000124568899999999999 99999999986
No 266
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=342.13 Aligned_cols=200 Identities=23% Similarity=0.313 Sum_probs=154.1
Q ss_pred hcCCCc-CCeeecccceEEEEEEec---CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeee--cCCCceE
Q 045539 616 TDRFSE-NNLIGIGSFGSIYVARLQ---DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSC--SNDDFKA 689 (897)
Q Consensus 616 ~~~y~~-~~~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~~ 689 (897)
.+.|++ .++||+|+||.||+|++. +++.||+|++..... .+.+.+|++++++++||||+++++++ ..+...|
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 345665 568999999999999865 578899999875422 24677899999999999999999999 4577899
Q ss_pred EEEEeccCCChhHhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee----CCCCcEE
Q 045539 690 LIMKYMPNGSLENCLYSG--------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL----DEDMVAH 757 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~--------~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll----~~~~~~k 757 (897)
+||||++ ++|.+++... ...+++..+..++.||+.||+|| |++||+||||||+||++ +.++.+|
T Consensus 97 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence 9999996 5777766422 13489999999999999999999 88999999999999999 6778999
Q ss_pred EeeccCccccCCCCc-eeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcc
Q 045539 758 ISDFGIAKLLSGEDQ-LSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDE 821 (897)
Q Consensus 758 L~DFg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~ 821 (897)
|+|||+|+....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 999999987653221 122334578999999998876 4589999999999999999999999965
No 267
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=335.38 Aligned_cols=263 Identities=21% Similarity=0.256 Sum_probs=195.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCc-----
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDF----- 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 687 (897)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 468999999999999999999875 68999999986532 3345778899999999999999999999987654
Q ss_pred -eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 688 -KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 688 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
.|+||||++ ++|.+++.. .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+..
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999996 688887643 389999999999999999999 788999999999999999999999999999986
Q ss_pred cCCCCceeeeeccccCcccCCcCccCC-CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhh-----------
Q 045539 767 LSGEDQLSIQIQTLATIGYMAPEYGTK-GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIN----------- 834 (897)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~----------- 834 (897)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+.....
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 5422 234568999999998776 678999999999999999999999997532110 0111110
Q ss_pred hcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 835 DLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 835 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
..........+...-................++.+++.+|++.|| ++|||++|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp-~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDV-DKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCT-TTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCc-ccCCCHHHHhcC
Confidence 000000111111000000000000001234568899999999999 999999999863
No 268
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.2e-37 Score=363.43 Aligned_cols=254 Identities=22% Similarity=0.318 Sum_probs=201.6
Q ss_pred HhcCCCcCCeeecccceEEEEEEecC----CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceE
Q 045539 615 ATDRFSENNLIGIGSFGSIYVARLQD----GMEVAVKVFHQQY-ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKA 689 (897)
Q Consensus 615 ~~~~y~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 689 (897)
..++|++.+.||+|+||.||+|.+.. +..||+|+++... ....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence 35688999999999999999998642 4679999987543 3445788999999999999999999999854 5689
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
+||||+++|+|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 99999999999999987766799999999999999999999 788999999999999999999999999999987653
Q ss_pred CCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHHhhhh
Q 045539 770 EDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTN 848 (897)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 848 (897)
... .......+|+.|+|||++....++.++|||||||++|||++ |..||...... .....+. ...
T Consensus 544 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~-----------~~~ 609 (656)
T 2j0j_A 544 STY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIE-----------NGE 609 (656)
T ss_dssp -----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHH-----------HTC
T ss_pred Ccc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHH-----------cCC
Confidence 322 22233457789999999988899999999999999999997 99998753211 1111111 000
Q ss_pred hcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcC
Q 045539 849 LLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALD 894 (897)
Q Consensus 849 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~ 894 (897)
....+ ..+...+.+++.+||+.|| ++|||++|+++.|+
T Consensus 610 ~~~~~-------~~~~~~l~~li~~~l~~dP-~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 610 RLPMP-------PNCPPTLYSLMTKCWAYDP-SRRPRFTELKAQLS 647 (656)
T ss_dssp CCCCC-------TTCCHHHHHHHHHHTCSSG-GGSCCHHHHHHHHH
T ss_pred CCCCC-------ccccHHHHHHHHHHcCCCh-hHCcCHHHHHHHHH
Confidence 00001 1223457899999999999 99999999999885
No 269
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.3e-36 Score=340.94 Aligned_cols=265 Identities=22% Similarity=0.265 Sum_probs=192.5
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecCC------CceE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSND------DFKA 689 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 689 (897)
..+|++.+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++... ...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 457999999999999999999987777799998864421 223699999999999999999998443 3478
Q ss_pred EEEEeccCCChhHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeC-CCCcEEEeeccCccc
Q 045539 690 LIMKYMPNGSLENCLY--SGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLD-EDMVAHISDFGIAKL 766 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~--~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~-~~~~~kL~DFg~a~~ 766 (897)
+||||++++.+..... .....+++..+..++.|+++||+|| |++||+||||||+||+++ .++.+||+|||+|+.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI---HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999998754443321 2234689999999999999999999 889999999999999998 799999999999987
Q ss_pred cCCCCceeeeeccccCcccCCcCccCCC-CCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHH--H
Q 045539 767 LSGEDQLSIQIQTLATIGYMAPEYGTKG-RVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVM--E 843 (897)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 843 (897)
...... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+.+.+...-..... .
T Consensus 192 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 192 LIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp CCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHH
T ss_pred ccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 643322 2345689999999987654 5899999999999999999999999763211 1111111111111000 0
Q ss_pred Hhhhhh-cchh----hhhHHH--HHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 844 VIDTNL-LRGE----ERFFAA--KEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 844 ~i~~~l-~~~~----~~~~~~--~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
...+.. .... ...+.. ......++.+++.+||+.|| ++|||+.|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~R~t~~e~l~h 322 (394)
T 4e7w_A 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTP-SARLTAIEALCH 322 (394)
T ss_dssp HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG-GGSCCHHHHHTS
T ss_pred hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCCh-hhCCCHHHHhcC
Confidence 000000 0000 000000 00123468899999999999 999999999863
No 270
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.7e-36 Score=342.70 Aligned_cols=263 Identities=23% Similarity=0.275 Sum_probs=191.2
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecC------CCce
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSN------DDFK 688 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~~ 688 (897)
..+|+..+.||+|+||.||+|++. +|+.||||++.... +...+|++++++++||||++++++|.. ....
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 347999999999999999999876 58999999986542 223479999999999999999998843 2246
Q ss_pred EEEEEeccCCChhHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCC-CcEEEeeccCc
Q 045539 689 ALIMKYMPNGSLENCLY---SGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDED-MVAHISDFGIA 764 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~-~~~kL~DFg~a 764 (897)
++||||+++ ++.+.+. .....+++..+..++.||++||+|| |++||+||||||+||+++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999975 5555443 2345689999999999999999999 89999999999999999955 57899999999
Q ss_pred cccCCCCceeeeeccccCcccCCcCccCCC-CCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHH
Q 045539 765 KLLSGEDQLSIQIQTLATIGYMAPEYGTKG-RVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVME 843 (897)
Q Consensus 765 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (897)
+....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.+.+...-......
T Consensus 205 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 205 KQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQ 280 (420)
T ss_dssp EECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHH
T ss_pred hhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHH
Confidence 87643322 2345689999999988654 7899999999999999999999999763211 11222221111110000
Q ss_pred H--hhhhhcc-hh----hhhHHHH--HHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 844 V--IDTNLLR-GE----ERFFAAK--EQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 844 ~--i~~~l~~-~~----~~~~~~~--~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
+ ..+.... .. ...+... .....++.+++.+||+.|| ++|||+.|+++
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP-~~R~t~~e~l~ 336 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTP-TARLTPLEACA 336 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSG-GGSCCHHHHHT
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCCh-hHCCCHHHHhC
Confidence 0 0000000 00 0000000 1123457899999999999 99999999985
No 271
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.2e-36 Score=333.73 Aligned_cols=264 Identities=17% Similarity=0.221 Sum_probs=198.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CC-ceEEEEEechhhHHHHHHHHHHHHHHHhcCCCc------cceEeeeecCCCc
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DG-MEVAVKVFHQQYERALKSFEDECEVMKRIRHRN------LVKIISSCSNDDF 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 687 (897)
.++|++.+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999875 34 68999999754 334567888999999998665 8999999999999
Q ss_pred eEEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee----------------
Q 045539 688 KALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL---------------- 750 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll---------------- 750 (897)
.++||||+ ++++.+++.... ..+++.++..++.||+.||+|| |++||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL---HENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 556666665443 5689999999999999999999 88999999999999999
Q ss_pred ---CCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCcc
Q 045539 751 ---DEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGEL 827 (897)
Q Consensus 751 ---~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~ 827 (897)
+.++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH 247 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 567899999999998654322 245689999999999999999999999999999999999999976321110
Q ss_pred -chhHHhhhcCCchHHHHh-----------------------hhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCC
Q 045539 828 -SLNRWINDLLPVSVMEVI-----------------------DTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNG 883 (897)
Q Consensus 828 -~~~~~~~~~~~~~~~~~i-----------------------~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~R 883 (897)
..........+....... ........ ...........++.+++.+||+.|| ++|
T Consensus 248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~L~~dP-~~R 325 (355)
T 2eu9_A 248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLK-SYMLQDSLEHVQLFDLMRRMLEFDP-AQR 325 (355)
T ss_dssp HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGG-GGCSCCSHHHHHHHHHHHHHTCSST-TTS
T ss_pred HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCccc-ccccccchhHHHHHHHHHHHhcCCh-hhC
Confidence 000001111111110000 00000000 0000001223468899999999999 999
Q ss_pred CCHHHHHh
Q 045539 884 ADMGWIFS 891 (897)
Q Consensus 884 Pt~~evl~ 891 (897)
||++|+++
T Consensus 326 pt~~e~l~ 333 (355)
T 2eu9_A 326 ITLAEALL 333 (355)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999985
No 272
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=9.6e-38 Score=340.55 Aligned_cols=258 Identities=21% Similarity=0.307 Sum_probs=198.9
Q ss_pred HHHHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceE
Q 045539 612 LLRATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKA 689 (897)
Q Consensus 612 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 689 (897)
+....++|++.+.||+|+||.||+|++. ..||+|+++... ....+.+.+|++++++++||||+++++++.+++..+
T Consensus 28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~--~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 28 WDIPFEQLEIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105 (319)
T ss_dssp SSSCCSCEECCCBCCCSSSSEEEEEEES--SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred ccCCHHHeEEeeEeccCCceEEEEEEEc--CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence 3344678999999999999999999876 359999987432 222356778999999999999999999999999999
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
+||||+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++ ++.+||+|||++.....
T Consensus 106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL---HAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHH---HHTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 99999999999999988776799999999999999999999 788999999999999998 67999999999876532
Q ss_pred CCc---eeeeeccccCcccCCcCccCC---------CCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcC
Q 045539 770 EDQ---LSIQIQTLATIGYMAPEYGTK---------GRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLL 837 (897)
Q Consensus 770 ~~~---~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 837 (897)
... ........|++.|+|||++.. ..++.++||||||+++|||++|+.||...... .....+....
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~ 259 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--AIIWQMGTGM 259 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--HHHHHHHTTC
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhccCC
Confidence 111 111223458999999998754 45788999999999999999999999753211 0000000000
Q ss_pred CchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 838 PVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 838 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.+.... .....++.+++.+||+.|| ++|||++|++++|++
T Consensus 260 --------~~~~~~---------~~~~~~l~~li~~~l~~~p-~~Rpt~~~l~~~l~~ 299 (319)
T 2y4i_B 260 --------KPNLSQ---------IGMGKEISDILLFCWAFEQ-EERPTFTKLMDMLEK 299 (319)
T ss_dssp --------CCCCCC---------SSCCTTHHHHHHHHHCSST-TTSCCHHHHHHHHTT
T ss_pred --------CCCCCc---------CCCCHHHHHHHHHHhcCCh-hhCcCHHHHHHHHHH
Confidence 000000 0112347899999999999 999999999999975
No 273
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.3e-36 Score=333.70 Aligned_cols=252 Identities=19% Similarity=0.220 Sum_probs=172.5
Q ss_pred HhcCCCcCC-eeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeeeecC----CCce
Q 045539 615 ATDRFSENN-LIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISSCSN----DDFK 688 (897)
Q Consensus 615 ~~~~y~~~~-~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 688 (897)
..++|.+.+ .||+|+||.||+|+.. +|+.||+|++...... ..+....++.++||||+++++++.. +...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA----RQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH----HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH----HHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356899855 6999999999999876 6899999998754221 1222334566789999999999865 4568
Q ss_pred EEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC---CCcEEEeeccCc
Q 045539 689 ALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE---DMVAHISDFGIA 764 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~---~~~~kL~DFg~a 764 (897)
++||||+++|+|.+++.... ..+++.++..++.|++.||+|| |++||+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~L---H~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL---HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999998764 4699999999999999999999 7889999999999999976 456999999999
Q ss_pred cccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHH
Q 045539 765 KLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEV 844 (897)
Q Consensus 765 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (897)
....... .....||+.|+|||++....++.++||||||+++|+|++|+.||.......... .....
T Consensus 179 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----------~~~~~ 244 (336)
T 3fhr_A 179 KETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP----------GMKRR 244 (336)
T ss_dssp EEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred eeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh----------hHHHh
Confidence 8654322 234568999999999988899999999999999999999999997632221100 00000
Q ss_pred hhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 845 IDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 845 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
+.......+ .+....+..++.+++.+|++.|| ++|||++|+++
T Consensus 245 ~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP-~~Rpt~~ell~ 287 (336)
T 3fhr_A 245 IRLGQYGFP---NPEWSEVSEDAKQLIRLLLKTDP-TERLTITQFMN 287 (336)
T ss_dssp ------CCC---TTTSTTCCHHHHHHHHHHSCSSG-GGSCCHHHHHH
T ss_pred hhccccccC---chhhccCCHHHHHHHHHHCCCCh-hHCcCHHHHhc
Confidence 000000000 00001223457899999999999 99999999987
No 274
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.5e-36 Score=328.40 Aligned_cols=266 Identities=23% Similarity=0.295 Sum_probs=198.4
Q ss_pred HHhcCCCcCCeeecccceEEEEEEe--cCCceEEEEEechhhH--HHHHHHHHHHHHHHhc---CCCccceEeeeec---
Q 045539 614 RATDRFSENNLIGIGSFGSIYVARL--QDGMEVAVKVFHQQYE--RALKSFEDECEVMKRI---RHRNLVKIISSCS--- 683 (897)
Q Consensus 614 ~~~~~y~~~~~lg~G~~g~Vy~a~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~--- 683 (897)
++.++|++.+.||+|+||.||+|+. .+|+.||+|+++.... .....+.+|+++++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3567999999999999999999987 3588999999864321 1123456777777766 8999999999986
Q ss_pred --CCCceEEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEee
Q 045539 684 --NDDFKALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISD 760 (897)
Q Consensus 684 --~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~D 760 (897)
.....++||||++ ++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCCHHHeEEcCCCCEEEec
Confidence 5677899999997 69999887654 4589999999999999999999 889999999999999999999999999
Q ss_pred ccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhh-----
Q 045539 761 FGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWIND----- 835 (897)
Q Consensus 761 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~----- 835 (897)
||.+....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ........
T Consensus 164 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 239 (326)
T 1blx_A 164 FGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPG 239 (326)
T ss_dssp CCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred CcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCC
Confidence 99997654222 1234568999999999998899999999999999999999999997632110 11111100
Q ss_pred --cCCchH---HHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 836 --LLPVSV---MEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 836 --~~~~~~---~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.++... .............. ........+.+++.+||+.|| ++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~L~~dP-~~Rpt~~e~l~ 296 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEK---FVTDIDELGKDLLLKCLTFNP-AKRISAYSALS 296 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGG---TCCSCCHHHHHHHHHHSCSST-TTSCCHHHHHT
T ss_pred cccCccccccchhhhcccCcchhhh---ccccCCHHHHHHHHHHcCCCc-ccCCCHHHHhc
Confidence 000000 00000000000000 001223457899999999999 99999999985
No 275
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.7e-36 Score=342.69 Aligned_cols=251 Identities=20% Similarity=0.300 Sum_probs=185.9
Q ss_pred cCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEEEEEec
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKALIMKYM 695 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 695 (897)
+.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+++..|+||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 4556678899999999987766779999999987543 24567899999987 7999999999999999999999999
Q ss_pred cCCChhHhhhcCCCC------CCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCC-------------CcE
Q 045539 696 PNGSLENCLYSGTCM------LDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDED-------------MVA 756 (897)
Q Consensus 696 ~~gsL~~~l~~~~~~------~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~-------------~~~ 756 (897)
+ |+|.+++...... .++..+..++.||+.||+|| |++||+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL---HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 6999999765421 12334578999999999999 78999999999999999654 489
Q ss_pred EEeeccCccccCCCCcee--eeeccccCcccCCcCccCC-------CCCCccchHHHHHHHHHHHHc-CCCCCcccccCc
Q 045539 757 HISDFGIAKLLSGEDQLS--IQIQTLATIGYMAPEYGTK-------GRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGE 826 (897)
Q Consensus 757 kL~DFg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~ 826 (897)
||+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 999999998775432211 1234579999999998765 678999999999999999999 999997532111
Q ss_pred cchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 827 LSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
........... ... .. .......++.+++.+|++.|| ++|||++||++
T Consensus 248 ---~~i~~~~~~~~-------~~~-~~-----~~~~~~~~~~~li~~~L~~dP-~~Rps~~eil~ 295 (434)
T 2rio_A 248 ---SNIIRGIFSLD-------EMK-CL-----HDRSLIAEATDLISQMIDHDP-LKRPTAMKVLR 295 (434)
T ss_dssp ---HHHHHTCCCCC-------CCT-TC-----CCHHHHHHHHHHHHHHTCSSG-GGSCCHHHHHT
T ss_pred ---HHHhcCCCCcc-------ccc-cc-----ccccchHHHHHHHHHHhhCCh-hhCCCHHHHHh
Confidence 11111111000 000 00 011334568899999999999 99999999986
No 276
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=342.57 Aligned_cols=250 Identities=19% Similarity=0.279 Sum_probs=187.0
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEEEEEe
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 694 (897)
..+|...+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +||||+++++++.+++..|+||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 457889999999999997766566799999999875432 2356799999999 799999999999999999999999
Q ss_pred ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC-----CCcEEEeeccCccccCC
Q 045539 695 MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE-----DMVAHISDFGIAKLLSG 769 (897)
Q Consensus 695 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~-----~~~~kL~DFg~a~~~~~ 769 (897)
++ |+|.+++..........++..++.||+.||+|| |++||+||||||+||+++. ...+||+|||+|+....
T Consensus 100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL---HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHH---HHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHH---HHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 96 699999987765566667789999999999999 8899999999999999953 33688999999987653
Q ss_pred CCc-eeeeeccccCcccCCcCccC---CCCCCccchHHHHHHHHHHHHc-CCCCCcccccCccchhHHhhhcCCchHHHH
Q 045539 770 EDQ-LSIQIQTLATIGYMAPEYGT---KGRVCTRGDVYSYGIMLMEMFT-KKKPTDEIFIGELSLNRWINDLLPVSVMEV 844 (897)
Q Consensus 770 ~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (897)
... ........||+.|+|||++. ...++.++|||||||++|||++ |..||...... ... ..
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---~~~-----------~~ 241 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---QAN-----------IL 241 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---HHH-----------HH
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---HHH-----------HH
Confidence 321 12234467999999999987 4567889999999999999999 89998642111 000 00
Q ss_pred hhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 845 IDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 845 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.......... ........+.+++.+||+.|| ++|||++||++
T Consensus 242 ~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP-~~Rps~~evl~ 283 (432)
T 3p23_A 242 LGACSLDCLH----PEKHEDVIARELIEKMIAMDP-QKRPSAKHVLK 283 (432)
T ss_dssp TTCCCCTTSC----TTCHHHHHHHHHHHHHSCSSG-GGSCCHHHHHT
T ss_pred hccCCccccC----ccccccHHHHHHHHHHHhCCH-hhCCCHHHHHh
Confidence 1000000000 001122346789999999999 99999999985
No 277
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.1e-36 Score=331.21 Aligned_cols=253 Identities=24% Similarity=0.281 Sum_probs=175.9
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh-HHHHHHHHHHHH-HHHhcCCCccceEeeeecCCCceEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY-ERALKSFEDECE-VMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
.++|+..+.||+|+||.||+|... +|+.||||+++... ......+.+|+. +++.++||||+++++++.+++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 478999999999999999999875 68999999987542 233445555665 677789999999999999999999999
Q ss_pred EeccCCChhHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 693 KYMPNGSLENCLYS----GTCMLDIFQRLNIMIDVALALEYLHFGHST-PIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 693 e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~-~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
||+++ +|.+++.. ....+++..+..++.|++.||+|| |+. ||+||||||+||+++.++.+||+|||++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL---KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHH---HHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHH---hccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 77776652 235689999999999999999999 677 9999999999999999999999999999876
Q ss_pred CCCCceeeeeccccCcccCCcCcc----CCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHH
Q 045539 768 SGEDQLSIQIQTLATIGYMAPEYG----TKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVME 843 (897)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (897)
..... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||..................+
T Consensus 177 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----- 248 (327)
T 3aln_A 177 VDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPP----- 248 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCC-----
T ss_pred ccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCC-----
Confidence 43321 2234689999999997 46678999999999999999999999997532111000000000000
Q ss_pred HhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 844 VIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 844 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.+..... .....++.+++.+||+.|| ++|||++|+++
T Consensus 249 ----~~~~~~~------~~~~~~l~~li~~~l~~dp-~~Rps~~ell~ 285 (327)
T 3aln_A 249 ----QLSNSEE------REFSPSFINFVNLCLTKDE-SKRPKYKELLK 285 (327)
T ss_dssp ----CCCCCSS------CCCCHHHHHHHHHHTCSSG-GGSCCHHHHTT
T ss_pred ----CCCCccc------ccCCHHHHHHHHHHhhCCh-hhCcCHHHHHh
Confidence 0000000 0122457899999999999 99999999976
No 278
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.8e-36 Score=333.53 Aligned_cols=265 Identities=18% Similarity=0.271 Sum_probs=197.1
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-----------CCccceEeeeec
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIR-----------HRNLVKIISSCS 683 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 683 (897)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 468999999999999999999864 68999999997542 33467788999999886 899999999987
Q ss_pred CCC----ceEEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEeCCCCCCCeeeC------
Q 045539 684 NDD----FKALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHST-PIIHCDLKPSNVLLD------ 751 (897)
Q Consensus 684 ~~~----~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~-~ivH~Dlkp~NIll~------ 751 (897)
..+ ..++||||+ +++|.+++.... ..+++..+..++.||+.||+|| |++ ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYM---HRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHH---HhcCCEEecCCChHHeEEeccCCCc
Confidence 544 789999999 899999987643 4589999999999999999999 777 999999999999994
Q ss_pred CCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCcc----
Q 045539 752 EDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGEL---- 827 (897)
Q Consensus 752 ~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~---- 827 (897)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4458999999999876432 2234689999999999888999999999999999999999999975321110
Q ss_pred -chhHHhh--hcCCchHHH-------Hhhh-----hh--------cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCC
Q 045539 828 -SLNRWIN--DLLPVSVME-------VIDT-----NL--------LRGEERFFAAKEQILLSVLNLATECTIESRDGNGA 884 (897)
Q Consensus 828 -~~~~~~~--~~~~~~~~~-------~i~~-----~l--------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RP 884 (897)
.....+. ...+..... .... .+ ................++.+++.+||+.|| ++||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP-~~Rp 326 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDP-RKRA 326 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSST-TTCB
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCc-cccC
Confidence 0111110 001100000 0000 00 000000000112455678999999999999 9999
Q ss_pred CHHHHHh
Q 045539 885 DMGWIFS 891 (897)
Q Consensus 885 t~~evl~ 891 (897)
|++|+++
T Consensus 327 t~~ell~ 333 (373)
T 1q8y_A 327 DAGGLVN 333 (373)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999987
No 279
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=328.84 Aligned_cols=246 Identities=20% Similarity=0.303 Sum_probs=190.3
Q ss_pred HHHHHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhH------HHHHHHHHHHHHHHhc----CCCccceEe
Q 045539 611 ELLRATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE------RALKSFEDECEVMKRI----RHRNLVKII 679 (897)
Q Consensus 611 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~ 679 (897)
+.....++|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+|+++++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 34455689999999999999999999864 688999999865432 1234456799999999 899999999
Q ss_pred eeecCCCceEEEEEe-ccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeC-CCCcEE
Q 045539 680 SSCSNDDFKALIMKY-MPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLD-EDMVAH 757 (897)
Q Consensus 680 ~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~-~~~~~k 757 (897)
+++.+.+..++|||| +.+++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++ .++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHC---HSRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 78999999987654 589999999999999999999 788999999999999999 889999
Q ss_pred EeeccCccccCCCCceeeeeccccCcccCCcCccCCCCC-CccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhc
Q 045539 758 ISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRV-CTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDL 836 (897)
Q Consensus 758 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 836 (897)
|+|||.+....... .....|+..|+|||++.+..+ +.++||||||+++|||++|+.||....
T Consensus 181 l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------- 243 (312)
T 2iwi_A 181 LIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------- 243 (312)
T ss_dssp ECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------
T ss_pred EEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------------
Confidence 99999998765432 234568999999998776665 458999999999999999999997521
Q ss_pred CCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 837 LPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 837 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
+.......- + .....++.+++.+||+.|| ++|||++|+++.
T Consensus 244 ------~~~~~~~~~-~-------~~~~~~~~~li~~~l~~~p-~~Rps~~e~l~~ 284 (312)
T 2iwi_A 244 ------EILEAELHF-P-------AHVSPDCCALIRRCLAPKP-SSRPSLEEILLD 284 (312)
T ss_dssp ------HHHHTCCCC-C-------TTSCHHHHHHHHHHTCSST-TTSCCHHHHHHS
T ss_pred ------HHhhhccCC-c-------ccCCHHHHHHHHHHccCCh-hhCcCHHHHhcC
Confidence 011111100 0 0122347889999999999 999999999873
No 280
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.7e-36 Score=328.92 Aligned_cols=251 Identities=22% Similarity=0.275 Sum_probs=179.9
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 692 (897)
.++|+..+.||+|+||.||+|++. +|+.||||++.... ....+.+.++..+++.++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 568999999999999999999876 68999999987543 223344555666788889999999999999999999999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST-PIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~-~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
||+ ++.+..+.......+++..+..++.|++.||+|| |++ ||+||||||+||+++.++.+||+|||.+.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL---KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 5666666554445689999999999999999999 664 99999999999999999999999999997654322
Q ss_pred ceeeeeccccCcccCCcCccC-----CCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhh
Q 045539 772 QLSIQIQTLATIGYMAPEYGT-----KGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVID 846 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 846 (897)
......||+.|+|||++. ...++.++||||||+++|||++|+.||..................+
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------- 248 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPP-------- 248 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCC--------
T ss_pred ---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCC--------
Confidence 123446899999999874 5678899999999999999999999997521111111111100000
Q ss_pred hhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 847 TNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 847 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
.... ......++.+++.+||+.|| ++|||++|+++
T Consensus 249 -~~~~--------~~~~~~~l~~li~~~l~~dp-~~Rps~~~ll~ 283 (318)
T 2dyl_A 249 -LLPG--------HMGFSGDFQSFVKDCLTKDH-RKRPKYNKLLE 283 (318)
T ss_dssp -CCCS--------SSCCCHHHHHHHHHHTCSCT-TTSCCHHHHTT
T ss_pred -CCCc--------cCCCCHHHHHHHHHHccCCh-hHCcCHHHHhh
Confidence 0000 00122457899999999999 99999999986
No 281
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.1e-36 Score=331.92 Aligned_cols=246 Identities=20% Similarity=0.240 Sum_probs=198.6
Q ss_pred HHHHHhcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhhHH------HHHHHHHHHHHHHhcC--CCccceEeee
Q 045539 611 ELLRATDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYER------ALKSFEDECEVMKRIR--HRNLVKIISS 681 (897)
Q Consensus 611 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~ 681 (897)
+.....++|++.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|+.++++++ ||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 33445678999999999999999999864 6899999998765321 2245678999999996 5999999999
Q ss_pred ecCCCceEEEEEeccC-CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeC-CCCcEEEe
Q 045539 682 CSNDDFKALIMKYMPN-GSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLD-EDMVAHIS 759 (897)
Q Consensus 682 ~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~-~~~~~kL~ 759 (897)
+.+++..++|||++.+ ++|.+++.... .+++..+..++.|++.||+|| |+.||+||||||+||+++ +++.+||+
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHC---HNCGVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTTEEEEC
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCcEeCCCCHHHEEEeCCCCCEEEe
Confidence 9999999999999976 89999987654 589999999999999999999 889999999999999999 78999999
Q ss_pred eccCccccCCCCceeeeeccccCcccCCcCccCCCCC-CccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCC
Q 045539 760 DFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRV-CTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLP 838 (897)
Q Consensus 760 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 838 (897)
|||++....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .......
T Consensus 193 Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~~~- 260 (320)
T 3a99_A 193 DFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQV- 260 (320)
T ss_dssp CCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHCCC-
T ss_pred eCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhcccc-
Confidence 999998765332 223568999999998876665 688999999999999999999996521 0000000
Q ss_pred chHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhh
Q 045539 839 VSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSA 892 (897)
Q Consensus 839 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~ 892 (897)
.... ....++.+++.+||+.|| ++|||++|+++.
T Consensus 261 ---------~~~~----------~~~~~~~~li~~~l~~dp-~~Rps~~~ll~h 294 (320)
T 3a99_A 261 ---------FFRQ----------RVSSECQHLIRWCLALRP-SDRPTFEEIQNH 294 (320)
T ss_dssp ---------CCSS----------CCCHHHHHHHHHHTCSSG-GGSCCHHHHHTS
T ss_pred ---------cccc----------cCCHHHHHHHHHHccCCh-hhCcCHHHHhcC
Confidence 0000 112357889999999999 999999999873
No 282
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.5e-35 Score=323.38 Aligned_cols=280 Identities=20% Similarity=0.246 Sum_probs=215.7
Q ss_pred cCChhHHHHHHHHHhccccCCCcccccCC----CCCCCCcceeeeEee--------CCCCeEEEEEeecccccccCCCCC
Q 045539 29 SNITTDQQALLALKAHISYDHTNLFARNW----TSSTSVCSWIGITCD--------VNSHRVIGLNISSFNLQGTIPPQL 96 (897)
Q Consensus 29 ~~~~~~~~aLl~~k~~~~~~~~~~~~~~w----~~~~~~c~w~gv~c~--------~~~~~v~~l~l~~~~l~g~~~~~l 96 (897)
++..+|++||++||+++..|+.+... +| ..+.++|.|.||+|+ ....+|+.|+|++++++ .+|+.+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~-~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHS-AWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHH-HHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhh-hhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 45678999999999999778777665 89 456789999999995 23468999999999998 889999
Q ss_pred CCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccc
Q 045539 97 GNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLAR 176 (897)
Q Consensus 97 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~ 176 (897)
+++++|++|+|++|.++ .+|..++++++|++|+|++|++. .+|..+.++++|++|+|++|++.+.+|..++..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~----- 173 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST----- 173 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE-----
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc-----
Confidence 99999999999999999 89999999999999999999998 778889999999999999999998999876541
Q ss_pred cccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccc
Q 045539 177 LAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNL 256 (897)
Q Consensus 177 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (897)
..+..|.++++|++|+|++|+++ .+|..+. .+++|++|+|++|.+++ +|..+..+++|++|+|++|.
T Consensus 174 ----------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~-~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~ 240 (328)
T 4fcg_A 174 ----------DASGEHQGLVNLQSLRLEWTGIR-SLPASIA-NLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCT 240 (328)
T ss_dssp ----------C-CCCEEESTTCCEEEEEEECCC-CCCGGGG-GCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCT
T ss_pred ----------cchhhhccCCCCCEEECcCCCcC-cchHhhc-CCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCc
Confidence 01223555666666666666666 6665543 56667777777777663 45567777777777777777
Q ss_pred cccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCcccc
Q 045539 257 FSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVG 336 (897)
Q Consensus 257 l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~ 336 (897)
+.+.+|.. +.++++|++|+|++|++.+.+ |..+.
T Consensus 241 ~~~~~p~~---------------------~~~l~~L~~L~L~~n~~~~~~-------------------------p~~~~ 274 (328)
T 4fcg_A 241 ALRNYPPI---------------------FGGRAPLKRLILKDCSNLLTL-------------------------PLDIH 274 (328)
T ss_dssp TCCBCCCC---------------------TTCCCCCCEEECTTCTTCCBC-------------------------CTTGG
T ss_pred chhhhHHH---------------------hcCCCCCCEEECCCCCchhhc-------------------------chhhh
Confidence 77666654 355677777777777666543 34455
Q ss_pred CccCCcEEEccCCCCCCCccccccCccchhhhcccCcccc
Q 045539 337 NLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLA 376 (897)
Q Consensus 337 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 376 (897)
.+++|++|+|++|++.+.+|..++++++|+.+++..|.+.
T Consensus 275 ~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 275 RLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp GCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 6677777777777777777777777777777777766655
No 283
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.8e-36 Score=348.35 Aligned_cols=264 Identities=23% Similarity=0.278 Sum_probs=195.8
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCccceEeeeecC------CCc
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQ-YERALKSFEDECEVMKRIRHRNLVKIISSCSN------DDF 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 687 (897)
.++|++.+.||+|+||.||+|.+. +|+.||||+++.. .....+.+.+|++++++++||||+++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 478999999999999999999875 6899999998754 34456788999999999999999999999865 678
Q ss_pred eEEEEEeccCCChhHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCc---EEEeecc
Q 045539 688 KALIMKYMPNGSLENCLYSGT--CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMV---AHISDFG 762 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~---~kL~DFg 762 (897)
.++||||+++++|.+++.... ..+++..+..++.|++.||+|| |+.||+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yL---Hs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL---HENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHH---HHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999998654 3588899999999999999999 7899999999999999987664 9999999
Q ss_pred CccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHH
Q 045539 763 IAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVM 842 (897)
Q Consensus 763 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 842 (897)
.+........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||.... ....|..........
T Consensus 170 ~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC-----
T ss_pred cccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccch
Confidence 9987654322 234579999999999999999999999999999999999999996521 111111110000000
Q ss_pred HH-hhhhhc------chhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHH
Q 045539 843 EV-IDTNLL------RGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIF 890 (897)
Q Consensus 843 ~~-i~~~l~------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl 890 (897)
.. ...... ...+............+.+++.+|+..|| ++|||++|++
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP-~kRPTa~elL 296 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQ-RQRGTDPQNP 296 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSC-C---CCTTCC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCH-hhCcCHHHHh
Confidence 00 000000 00000000001234568899999999999 9999998754
No 284
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.6e-34 Score=317.35 Aligned_cols=306 Identities=24% Similarity=0.375 Sum_probs=180.9
Q ss_pred CCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccc
Q 045539 97 GNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLAR 176 (897)
Q Consensus 97 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~ 176 (897)
..+++|++|++++|.++ .+| .+..+++|++|++++|++.+..+ +.++++|++|+|++|.+++ +| .+.++++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCE
Confidence 45677788888888776 344 37777888888888887766544 7777777777777777763 33 5677777777
Q ss_pred cccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccc
Q 045539 177 LAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNL 256 (897)
Q Consensus 177 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (897)
|++++|++++..+ +.++++|++|++++|.....++. +..+++|++|++++|.
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~--------------------------~~~l~~L~~L~l~~~~ 166 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLSP--------------------------LSNMTGLNYLTVTESK 166 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG--------------------------GTTCTTCCEEECCSSC
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCcccccc--------------------------hhhCCCCcEEEecCCC
Confidence 7777777766544 66666666666666644423222 3344444444444444
Q ss_pred cccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCcccc
Q 045539 257 FSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVG 336 (897)
Q Consensus 257 l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~ 336 (897)
+.+..+ +..+++|++|++++|++.+.. . +.
T Consensus 167 ~~~~~~-----------------------~~~l~~L~~L~l~~n~l~~~~--------------------------~-~~ 196 (347)
T 4fmz_A 167 VKDVTP-----------------------IANLTDLYSLSLNYNQIEDIS--------------------------P-LA 196 (347)
T ss_dssp CCCCGG-----------------------GGGCTTCSEEECTTSCCCCCG--------------------------G-GG
T ss_pred cCCchh-----------------------hccCCCCCEEEccCCcccccc--------------------------c-cc
Confidence 432221 234445555555555444220 0 33
Q ss_pred CccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCccccccccccee
Q 045539 337 NLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVL 416 (897)
Q Consensus 337 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 416 (897)
.+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|++|++++|++++. +.+..+++|+.|
T Consensus 197 ~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L 270 (347)
T 4fmz_A 197 SLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKML 270 (347)
T ss_dssp GCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred CCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEE
Confidence 44455555555555554333 4555555555555555553322 55555666666666666532 345566666666
Q ss_pred ccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcC
Q 045539 417 YLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLS 496 (897)
Q Consensus 417 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 496 (897)
++++|++++. ..+..+++|+ .|++++|++++..|..++.+++|++|++++|++++..| +..++
T Consensus 271 ~l~~n~l~~~--~~~~~l~~L~-------------~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~ 333 (347)
T 4fmz_A 271 NVGSNQISDI--SVLNNLSQLN-------------SLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLS 333 (347)
T ss_dssp ECCSSCCCCC--GGGGGCTTCS-------------EEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCT
T ss_pred EccCCccCCC--hhhcCCCCCC-------------EEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhh
Confidence 6666666643 2355555555 44445555555566667777777777888887776555 77778
Q ss_pred CCcEEeccCCccC
Q 045539 497 SLEVLDLSKNKIS 509 (897)
Q Consensus 497 ~L~~L~Ls~N~l~ 509 (897)
+|+.|++++|.|+
T Consensus 334 ~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 334 KMDSADFANQVIK 346 (347)
T ss_dssp TCSEESSSCC---
T ss_pred ccceeehhhhccc
Confidence 8888888888775
No 285
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.3e-34 Score=317.80 Aligned_cols=307 Identities=24% Similarity=0.368 Sum_probs=225.3
Q ss_pred ccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccccccccccccccccccccccccccc
Q 045539 120 IFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALK 199 (897)
Q Consensus 120 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 199 (897)
+..+++|++|++++|.+... + .+..+++|++|++++|++++ +|. +..+++|++|++++|+++.+ ..+.++
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l---- 109 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITDI--SALQNL---- 109 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC--GGGTTC----
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccCc--hHHcCC----
Confidence 45667777777777766543 2 25566666666666666653 333 55555555555555555543 124444
Q ss_pred ccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccCCCCc
Q 045539 200 EIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPE 279 (897)
Q Consensus 200 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~ 279 (897)
++|++|++++|.+.+..+ +..+++|+.|++++|......+
T Consensus 110 ---------------------~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~----------------- 149 (347)
T 4fmz_A 110 ---------------------TNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS----------------- 149 (347)
T ss_dssp ---------------------TTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-----------------
T ss_pred ---------------------CcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-----------------
Confidence 445555555555443322 6677888888888885443332
Q ss_pred ccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccc
Q 045539 280 LSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITF 359 (897)
Q Consensus 280 ~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 359 (897)
.+..+++|++|++++|++.+.. .+..+++|++|++++|++++..+ +
T Consensus 150 -----~~~~l~~L~~L~l~~~~~~~~~---------------------------~~~~l~~L~~L~l~~n~l~~~~~--~ 195 (347)
T 4fmz_A 150 -----PLSNMTGLNYLTVTESKVKDVT---------------------------PIANLTDLYSLSLNYNQIEDISP--L 195 (347)
T ss_dssp -----GGTTCTTCCEEECCSSCCCCCG---------------------------GGGGCTTCSEEECTTSCCCCCGG--G
T ss_pred -----chhhCCCCcEEEecCCCcCCch---------------------------hhccCCCCCEEEccCCccccccc--c
Confidence 2567889999999999887531 16678899999999999998544 8
Q ss_pred cCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceE
Q 045539 360 SQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILF 439 (897)
Q Consensus 360 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 439 (897)
..+++|+.|++++|++.+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+++. ..+..+++|++
T Consensus 196 ~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~ 269 (347)
T 4fmz_A 196 ASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKM 269 (347)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCE
T ss_pred cCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCE
Confidence 899999999999999996555 8889999999999999985444 88999999999999999863 45777888885
Q ss_pred EeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhh
Q 045539 440 IDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKL 519 (897)
Q Consensus 440 L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 519 (897)
|++++|. +++. +.+..+++|+.|++++|++++..|..++.+++|++|+|++|++++..| +..+
T Consensus 270 L~l~~n~-------------l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l 332 (347)
T 4fmz_A 270 LNVGSNQ-------------ISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASL 332 (347)
T ss_dssp EECCSSC-------------CCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGC
T ss_pred EEccCCc-------------cCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhh
Confidence 5555554 4432 357889999999999999998888889999999999999999997666 8899
Q ss_pred cccceEeccCCccc
Q 045539 520 LYLKHLNLSFNKLE 533 (897)
Q Consensus 520 ~~L~~L~ls~N~l~ 533 (897)
++|+.|++++|+++
T Consensus 333 ~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 333 SKMDSADFANQVIK 346 (347)
T ss_dssp TTCSEESSSCC---
T ss_pred hccceeehhhhccc
Confidence 99999999999875
No 286
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.4e-35 Score=314.20 Aligned_cols=227 Identities=13% Similarity=0.095 Sum_probs=181.6
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 691 (897)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 368999999999999999999876 48999999997543 34457889999999999999999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||++|++|.+++..+ ....++..++.|++.||+|| |++||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~l---H~~givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAA---HRAGVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHH---HHCCCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 9999999999998653 35667899999999999999 88999999999999999999999998543
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccc--hhHHhhhcCCchHHHHhhhhh
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELS--LNRWINDLLPVSVMEVIDTNL 849 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l 849 (897)
|++ .++.++|||||||++|||++|+.||......... .........+ ...
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~------- 226 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPI-EPA------- 226 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBC-CHH-------
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCC-Chh-------
Confidence 333 3678999999999999999999999863222100 0000000000 000
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHhhcCC
Q 045539 850 LRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFSALDP 895 (897)
Q Consensus 850 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~~L~~ 895 (897)
.....+..++.+++.+||+.|| ++| |++|+++.|++
T Consensus 227 --------~~~~~~~~~l~~li~~~l~~dP-~~R-s~~el~~~L~~ 262 (286)
T 3uqc_A 227 --------DIDRDIPFQISAVAARSVQGDG-GIR-SASTLLNLMQQ 262 (286)
T ss_dssp --------HHCTTSCHHHHHHHHHHHCTTS-SCC-CHHHHHHHHHH
T ss_pred --------hcccCCCHHHHHHHHHHcccCC-ccC-CHHHHHHHHHH
Confidence 0011233457899999999999 999 99999998853
No 287
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7.7e-36 Score=323.78 Aligned_cols=256 Identities=32% Similarity=0.518 Sum_probs=236.0
Q ss_pred CCCcEEEecCCCCCC--CCCCcccCchHHHHHHHhcc-CCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchh
Q 045539 290 KKLKVLILTGNPLDG--ILPKSKGNLSLSLEIILMDN-CSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQ 366 (897)
Q Consensus 290 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 366 (897)
.+++.|+|++|++++ .+|..+..++ +|++|++++ |.+++.+|..|+++++|++|+|++|++++.+|..|.++++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~-~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCT-TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCC-CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 579999999999999 8899999887 899999994 999999999999999999999999999988999999999999
Q ss_pred hhcccCcccccccchhhhcccccccccccccccccCCCccccccc-ccceeccccccccCCccccccccccceEEeecCC
Q 045539 367 ALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLT-SLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSN 445 (897)
Q Consensus 367 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 445 (897)
+|+|++|++++.+|..+..+++|++|+|++|++++.+|..+++++ +|+.|++++|++++.+|..+..++ |+
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~------- 200 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LA------- 200 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CS-------
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-cc-------
Confidence 999999999999999999999999999999999999999999998 899999999999988998888775 66
Q ss_pred cccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceE
Q 045539 446 SLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHL 525 (897)
Q Consensus 446 ~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 525 (897)
.|++++|++++.+|..++.+++|+.|+|++|++++.+|. +..+++|++|+|++|+|+|.+|.++..+++|+.|
T Consensus 201 ------~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 273 (313)
T 1ogq_A 201 ------FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSL 273 (313)
T ss_dssp ------EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEE
T ss_pred ------EEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEE
Confidence 666677777778899999999999999999999987776 8899999999999999999999999999999999
Q ss_pred eccCCcccccCCCCCCCCCCCcccccchhhhhhhhh
Q 045539 526 NLSFNKLEGEIPRGGPFANLTAKSFMGNELLKMLLL 561 (897)
Q Consensus 526 ~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~l 561 (897)
+|++|+++|.+|..+.+++++.+.+.||+++|+.++
T Consensus 274 ~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 274 NVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp ECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred ECcCCcccccCCCCccccccChHHhcCCCCccCCCC
Confidence 999999999999998899999999999999998643
No 288
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-34 Score=342.87 Aligned_cols=309 Identities=18% Similarity=0.187 Sum_probs=230.7
Q ss_pred eEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEee
Q 045539 77 RVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLS 156 (897)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 156 (897)
.+..++++++.+.+..+..++.+++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 45678899998886555567899999999999999998888899999999999999999999999999999999999999
Q ss_pred ecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccccceeeccccccccc
Q 045539 157 INGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGT 236 (897)
Q Consensus 157 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~ 236 (897)
+|.+++..+..|+++++|++|+|++|.++++.|..|.++++|++|+|++|.+++ ++. ..+++|+.|++++|.+++.
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~---~~l~~L~~L~l~~n~l~~l 207 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VDL---SLIPSLFHANVSYNLLSTL 207 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB-CCG---GGCTTCSEEECCSSCCSEE
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC-cCh---hhhhhhhhhhcccCccccc
Confidence 999996555567999999999999999999999999999999999999999984 331 2345555555555555421
Q ss_pred ccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHH
Q 045539 237 VPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLS 316 (897)
Q Consensus 237 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~ 316 (897)
... ++|+.|++++|.+....+
T Consensus 208 -----~~~---------------------------------------------~~L~~L~ls~n~l~~~~~--------- 228 (597)
T 3oja_B 208 -----AIP---------------------------------------------IAVEELDASHNSINVVRG--------- 228 (597)
T ss_dssp -----ECC---------------------------------------------TTCSEEECCSSCCCEEEC---------
T ss_pred -----cCC---------------------------------------------chhheeeccCCccccccc---------
Confidence 122 345555555555542211
Q ss_pred HHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccc
Q 045539 317 LEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQG 396 (897)
Q Consensus 317 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 396 (897)
. ..++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..|..+++|++|+|++
T Consensus 229 -----------------~--~~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 287 (597)
T 3oja_B 229 -----------------P--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISN 287 (597)
T ss_dssp -----------------S--CCSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTT
T ss_pred -----------------c--cCCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCC
Confidence 0 013566666666666652 5566666777777777777766677777777777777777
Q ss_pred cccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCccccc
Q 045539 397 NKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQ 476 (897)
Q Consensus 397 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~ 476 (897)
|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|++|++++|.+. +. | ++.+++|+.
T Consensus 288 N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~-------------~~-~--~~~~~~L~~ 349 (597)
T 3oja_B 288 NRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-------------TL-K--LSTHHTLKN 349 (597)
T ss_dssp SCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC-------------CC-C--CCTTCCCSE
T ss_pred CCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCC-------------Cc-C--hhhcCCCCE
Confidence 77774 5666667777888888888877 46666777777775555554443 22 2 556788888
Q ss_pred ccccCceeccc
Q 045539 477 MFLEYNRLEGS 487 (897)
Q Consensus 477 L~ls~N~l~~~ 487 (897)
|++++|.+++.
T Consensus 350 L~l~~N~~~~~ 360 (597)
T 3oja_B 350 LTLSHNDWDCN 360 (597)
T ss_dssp EECCSSCEEHH
T ss_pred EEeeCCCCCCh
Confidence 99999998864
No 289
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-34 Score=324.62 Aligned_cols=308 Identities=19% Similarity=0.188 Sum_probs=207.3
Q ss_pred eEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEee
Q 045539 77 RVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLS 156 (897)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 156 (897)
.+..++++++.++...+..+..+++|++|+|++|.+++..|..|+++++|++|+|++|++.+.+|..+.++++|++|+|+
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 125 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECC
Confidence 56789999999885444457899999999999999998888899999999999999999999999999999999999999
Q ss_pred ecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccccceeeccccccccc
Q 045539 157 INGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGT 236 (897)
Q Consensus 157 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~ 236 (897)
+|+++...+..|+++++|++|++++|+++++.+..|.++++|++|++++|++++ ++. ..+++|+.|++++|.+++.
T Consensus 126 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~---~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 126 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VDL---SLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB-CCG---GGCTTCSEEECCSSCCSEE
T ss_pred CCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc-ccc---ccccccceeeccccccccc
Confidence 999994444457999999999999999999999999999999999999999983 331 2456666666666665431
Q ss_pred ccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHH
Q 045539 237 VPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLS 316 (897)
Q Consensus 237 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~ 316 (897)
...++|+.|++++|.++..... .
T Consensus 202 -----~~~~~L~~L~l~~n~l~~~~~~------------------------~---------------------------- 224 (390)
T 3o6n_A 202 -----AIPIAVEELDASHNSINVVRGP------------------------V---------------------------- 224 (390)
T ss_dssp -----ECCSSCSEEECCSSCCCEEECC------------------------C----------------------------
T ss_pred -----CCCCcceEEECCCCeeeecccc------------------------c----------------------------
Confidence 2233455555555544433111 1
Q ss_pred HHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccc
Q 045539 317 LEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQG 396 (897)
Q Consensus 317 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 396 (897)
.++|+.|++++|++++. ..+..+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 225 ---------------------~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (390)
T 3o6n_A 225 ---------------------NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISN 281 (390)
T ss_dssp ---------------------CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCS
T ss_pred ---------------------cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCC
Confidence 13445555555555442 3444455555555555555544455555555555555555
Q ss_pred cccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCccccc
Q 045539 397 NKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQ 476 (897)
Q Consensus 397 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~ 476 (897)
|++++ +|..+..+++|+.|++++|+++ .+|..+..+++|++|++++|.++. . | +..+++|+.
T Consensus 282 n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~-------------~-~--~~~~~~L~~ 343 (390)
T 3o6n_A 282 NRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT-------------L-K--LSTHHTLKN 343 (390)
T ss_dssp SCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-------------C-C--CCTTCCCSE
T ss_pred CcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce-------------e-C--chhhccCCE
Confidence 55552 3444455555666666666555 244445555555544444433321 1 1 445566666
Q ss_pred ccccCceecc
Q 045539 477 MFLEYNRLEG 486 (897)
Q Consensus 477 L~ls~N~l~~ 486 (897)
|++++|++++
T Consensus 344 L~l~~N~~~~ 353 (390)
T 3o6n_A 344 LTLSHNDWDC 353 (390)
T ss_dssp EECCSSCEEH
T ss_pred EEcCCCCccc
Confidence 6666666664
No 290
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.8e-34 Score=311.36 Aligned_cols=230 Identities=18% Similarity=0.232 Sum_probs=179.0
Q ss_pred hcCCCcC-CeeecccceEEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHH-HhcCCCccceEeeeecC----CCce
Q 045539 616 TDRFSEN-NLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVM-KRIRHRNLVKIISSCSN----DDFK 688 (897)
Q Consensus 616 ~~~y~~~-~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 688 (897)
.++|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|++++ +..+||||+++++++.. +...
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 4677777 78999999999999874 6899999998754 4566788888 55589999999999876 6788
Q ss_pred EEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC---CCcEEEeeccCc
Q 045539 689 ALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE---DMVAHISDFGIA 764 (897)
Q Consensus 689 ~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~---~~~~kL~DFg~a 764 (897)
++||||+++++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998754 4689999999999999999999 8899999999999999997 789999999998
Q ss_pred cccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHH
Q 045539 765 KLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEV 844 (897)
Q Consensus 765 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (897)
.... +..++.++||||+||++|||++|+.||......... ....
T Consensus 168 ~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~--~~~~---------- 211 (299)
T 3m2w_A 168 KETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--PGMK---------- 211 (299)
T ss_dssp EECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------CCSC----------
T ss_pred cccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh--HHHH----------
Confidence 6532 234678999999999999999999999653211100 0000
Q ss_pred hhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHHHHh
Q 045539 845 IDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGWIFS 891 (897)
Q Consensus 845 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~evl~ 891 (897)
....................++.+++.+||+.|| ++|||++|+++
T Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP-~~Rps~~e~l~ 256 (299)
T 3m2w_A 212 -TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP-TQRMTITEFMN 256 (299)
T ss_dssp -CSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSST-TTSCCHHHHHT
T ss_pred -HHHhhccccCCchhcccCCHHHHHHHHHHcccCh-hhCCCHHHHhc
Confidence 0000000000011112334568899999999999 99999999986
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-34 Score=348.34 Aligned_cols=236 Identities=21% Similarity=0.291 Sum_probs=189.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec--CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCccceEeeeecCCCc-----
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ--DGMEVAVKVFHQQ-YERALKSFEDECEVMKRIRHRNLVKIISSCSNDDF----- 687 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 687 (897)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999875 5899999998643 23455678899999999999999999999987655
Q ss_pred eEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 688 KALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 688 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
.|+||||++|++|.+++.. .+++.++..++.||+.||+|| |++||+||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~l---H~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYL---HSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHH---HHCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999987755 589999999999999999999 78999999999999999886 8999999999876
Q ss_pred CCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhh
Q 045539 768 SGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDT 847 (897)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 847 (897)
... ....||+.|+|||++.++. +.++|||||||++|+|++|..||........ +..
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~~~------- 287 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------PED------- 287 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------CTT-------
T ss_pred ccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------ccc-------
Confidence 533 3456999999999876554 8899999999999999999988765322110 000
Q ss_pred hhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCC-HHHHHhhc
Q 045539 848 NLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGAD-MGWIFSAL 893 (897)
Q Consensus 848 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt-~~evl~~L 893 (897)
.+ .......+.+++.+||+.|| ++||+ ++++.+.|
T Consensus 288 ----~~------~~~~~~~l~~li~~~l~~dP-~~R~~~~~~l~~~l 323 (681)
T 2pzi_A 288 ----DP------VLKTYDSYGRLLRRAIDPDP-RQRFTTAEEMSAQL 323 (681)
T ss_dssp ----CH------HHHHCHHHHHHHHHHTCSSG-GGSCSSHHHHHHHH
T ss_pred ----cc------ccccCHHHHHHHhhhccCCh-hhCCCHHHHHHHHH
Confidence 00 01122457889999999999 99996 44444433
No 292
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=9.6e-35 Score=319.14 Aligned_cols=242 Identities=17% Similarity=0.168 Sum_probs=182.9
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhh--------HHHHHHHHHHHHHHHhcC----------------
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQY--------ERALKSFEDECEVMKRIR---------------- 671 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------------- 671 (897)
.++|++.+.||+|+||+||+|++ +|+.||||+++... ....+.+.+|+++++.++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999988 58999999997542 223467889999999886
Q ss_pred ----------CCccceEeeeecC-------------CCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 045539 672 ----------HRNLVKIISSCSN-------------DDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALE 728 (897)
Q Consensus 672 ----------h~niv~l~~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~ 728 (897)
||||+++++++.+ ++..|+||||+++|++.+.+.. ..+++.++..++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 4555555555543 7789999999999977666644 34899999999999999999
Q ss_pred HHHhcC-CCCcEeCCCCCCCeeeCCCC--------------------cEEEeeccCccccCCCCceeeeeccccCcccCC
Q 045539 729 YLHFGH-STPIIHCDLKPSNVLLDEDM--------------------VAHISDFGIAKLLSGEDQLSIQIQTLATIGYMA 787 (897)
Q Consensus 729 ~Lh~~h-~~~ivH~Dlkp~NIll~~~~--------------------~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~a 787 (897)
|| | ++||+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 176 ~l---H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~a 245 (336)
T 2vuw_A 176 VA---EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMD 245 (336)
T ss_dssp HH---HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTC
T ss_pred HH---HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccC
Confidence 99 7 89999999999999999887 9999999999876432 2369999999
Q ss_pred cCccCCCCCCccchHHHHHHH-HHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHH
Q 045539 788 PEYGTKGRVCTRGDVYSYGIM-LMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLS 866 (897)
Q Consensus 788 PE~~~~~~~~~~sDv~slGvi-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 866 (897)
||++.+.. +.++||||+|++ .+++++|..||... .|... ....+.... ................+
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHY----LTDKMLKQM-TFKTKCNTPAMKQIKRK 311 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHH----HHHHHHHTC-CCSSCCCSHHHHHHHHH
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhH----HHHhhhhhh-ccCcccchhhhhhcCHH
Confidence 99987666 899999998777 78899999998541 01000 001111110 00111111223456677
Q ss_pred HHHHHhHccCCCCCCCCCCHHHHH
Q 045539 867 VLNLATECTIESRDGNGADMGWIF 890 (897)
Q Consensus 867 l~~l~~~cl~~dP~~~RPt~~evl 890 (897)
+.+++.+|++.| |++|++
T Consensus 312 ~~dli~~~L~~d------sa~e~l 329 (336)
T 2vuw_A 312 IQEFHRTMLNFS------SATDLL 329 (336)
T ss_dssp HHHHHHHGGGSS------SHHHHH
T ss_pred HHHHHHHHhccC------CHHHHH
Confidence 899999999765 689888
No 293
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-34 Score=327.07 Aligned_cols=240 Identities=15% Similarity=0.114 Sum_probs=179.7
Q ss_pred hcCCCcCCeeecccceEEEEEEec-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCC-CccceEe-----------
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQY---ERALKSFEDECEVMKRIRH-RNLVKII----------- 679 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l~----------- 679 (897)
...|...+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|+.+++.++| ++...+.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345778899999999999999855 69999999987332 2335778999999999987 3222111
Q ss_pred ----------eeecC-----CCceEEEEEeccCCChhHhhh------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 045539 680 ----------SSCSN-----DDFKALIMKYMPNGSLENCLY------SGTCMLDIFQRLNIMIDVALALEYLHFGHSTPI 738 (897)
Q Consensus 680 ----------~~~~~-----~~~~~lv~e~~~~gsL~~~l~------~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~i 738 (897)
.++.. ....+++|+++ +++|.+++. .....+++..+..++.|+++||+|| |++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL---HHYGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH---HHTTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHH---HhCCc
Confidence 11111 12356777765 789998884 2234578889999999999999999 88999
Q ss_pred EeCCCCCCCeeeCCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCcc----------CCCCCCccchHHHHHHH
Q 045539 739 IHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYG----------TKGRVCTRGDVYSYGIM 808 (897)
Q Consensus 739 vH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDv~slGvi 808 (897)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||+
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 99999999999999999999999998865322 334567 999999988 66678899999999999
Q ss_pred HHHHHcCCCCCcccccCccchhHHhhhcCCchHHHHhhhhhcchhhhhHHHHHHHHHHHHHHHhHccCCCCCCCCCCHHH
Q 045539 809 LMEMFTKKKPTDEIFIGELSLNRWINDLLPVSVMEVIDTNLLRGEERFFAAKEQILLSVLNLATECTIESRDGNGADMGW 888 (897)
Q Consensus 809 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~~RPt~~e 888 (897)
+|||++|+.||........ ....+.... .+..++.+++.+||+.|| ++|||+.|
T Consensus 307 l~elltg~~Pf~~~~~~~~-----------------~~~~~~~~~--------~~~~~~~~li~~~l~~dP-~~Rpt~~~ 360 (413)
T 3dzo_A 307 IYWIWCADLPNTDDAALGG-----------------SEWIFRSCK--------NIPQPVRALLEGFLRYPK-EDRLLPLQ 360 (413)
T ss_dssp HHHHHHSSCCCCTTGGGSC-----------------SGGGGSSCC--------CCCHHHHHHHHHHTCSSG-GGSCCHHH
T ss_pred HHHHHHCCCCCCCcchhhh-----------------HHHHHhhcc--------cCCHHHHHHHHHHccCCh-hhCcCHHH
Confidence 9999999999976322110 001111000 112457899999999999 99999988
Q ss_pred HHh
Q 045539 889 IFS 891 (897)
Q Consensus 889 vl~ 891 (897)
+++
T Consensus 361 ~l~ 363 (413)
T 3dzo_A 361 AME 363 (413)
T ss_dssp HTT
T ss_pred HHh
Confidence 865
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=9.2e-33 Score=302.73 Aligned_cols=294 Identities=21% Similarity=0.275 Sum_probs=175.8
Q ss_pred CCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccc
Q 045539 101 SLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFA 180 (897)
Q Consensus 101 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~ 180 (897)
+|+.+++++|.++ .+|..+. ++|++|+|++|++.+.. |..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~------------------------~~~~~~l~~L~~L~L~ 86 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELR------------------------KDDFKGLQHLYALVLV 86 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEEC------------------------TTTTTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccC------------------------HhHhhCCCCCcEEECC
Confidence 5666666666665 4555443 45555555555544443 4445555555555555
Q ss_pred cccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEcccccccc-
Q 045539 181 TNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSG- 259 (897)
Q Consensus 181 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~- 259 (897)
+|+++++.|..|.++++|++|+|++|+++ .+|..++ ++|++|++++|.+++..+..|.++++|+.|++++|.++.
T Consensus 87 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 162 (332)
T 2ft3_A 87 NNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENS 162 (332)
T ss_dssp SSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGG
T ss_pred CCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccC
Confidence 55555555555666666666666666665 5555543 566777777777665555567777777777777777653
Q ss_pred -ccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCc
Q 045539 260 -FIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNL 338 (897)
Q Consensus 260 -~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l 338 (897)
..+.. +..+ +|++|++++|+++++ | ..+.
T Consensus 163 ~~~~~~---------------------~~~l-~L~~L~l~~n~l~~l-~-------------------------~~~~-- 192 (332)
T 2ft3_A 163 GFEPGA---------------------FDGL-KLNYLRISEAKLTGI-P-------------------------KDLP-- 192 (332)
T ss_dssp GSCTTS---------------------SCSC-CCSCCBCCSSBCSSC-C-------------------------SSSC--
T ss_pred CCCccc---------------------ccCC-ccCEEECcCCCCCcc-C-------------------------cccc--
Confidence 33322 2333 666666666666542 1 1111
Q ss_pred cCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceecc
Q 045539 339 GNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYL 418 (897)
Q Consensus 339 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 418 (897)
++|++|++++|++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|++
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 46777777777777766677777777777777777777666667777777777777777777 66666777777777777
Q ss_pred ccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceec--ccCCCCCCCcC
Q 045539 419 GLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLE--GSIPESFGDLS 496 (897)
Q Consensus 419 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~--~~~p~~~~~l~ 496 (897)
++|++++..+..|....- -.....|+.|++++|.+. +..|..|..++
T Consensus 272 ~~N~l~~~~~~~~~~~~~-------------------------------~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~ 320 (332)
T 2ft3_A 272 HTNNITKVGVNDFCPVGF-------------------------------GVKRAYYNGISLFNNPVPYWEVQPATFRCVT 320 (332)
T ss_dssp CSSCCCBCCTTSSSCSSC-------------------------------CSSSCCBSEEECCSSSSCGGGSCGGGGTTBC
T ss_pred CCCCCCccChhHcccccc-------------------------------ccccccccceEeecCcccccccCcccccccc
Confidence 777777654444443210 001234555555555554 44555566666
Q ss_pred CCcEEeccCCc
Q 045539 497 SLEVLDLSKNK 507 (897)
Q Consensus 497 ~L~~L~Ls~N~ 507 (897)
+|+.|+|++|+
T Consensus 321 ~L~~l~l~~n~ 331 (332)
T 2ft3_A 321 DRLAIQFGNYK 331 (332)
T ss_dssp CSTTEEC----
T ss_pred hhhhhhccccc
Confidence 66666666653
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.1e-32 Score=302.24 Aligned_cols=288 Identities=24% Similarity=0.273 Sum_probs=210.7
Q ss_pred cccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccCC
Q 045539 197 ALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSS 276 (897)
Q Consensus 197 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~ 276 (897)
+++.+++++|.++ .+|..++ ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~------------ 97 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKA------------ 97 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGG------------
T ss_pred cCCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhH------------
Confidence 4566666666665 5555443 45666666666666655666666666777777666666655543
Q ss_pred CCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCC--CC
Q 045539 277 TPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLT--EP 354 (897)
Q Consensus 277 ~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~ 354 (897)
+.++++|++|+|++|+++. +|..+. .+|++|++++|.+++..+..|..+++|++|++++|.++ +.
T Consensus 98 ---------~~~l~~L~~L~L~~n~l~~-l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 164 (332)
T 2ft3_A 98 ---------FSPLRKLQKLYISKNHLVE-IPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGF 164 (332)
T ss_dssp ---------STTCTTCCEEECCSSCCCS-CCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGS
T ss_pred ---------hhCcCCCCEEECCCCcCCc-cCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCC
Confidence 3455666677777766663 333332 25666666666666666677888999999999999986 36
Q ss_pred ccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCcccccccc
Q 045539 355 IPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNL 434 (897)
Q Consensus 355 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 434 (897)
.+..|..+ +|+.|++++|++++ +|..+. ++|++|++++|++++..|..+.++++|+.|++++|++++..+..+..+
T Consensus 165 ~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 240 (332)
T 2ft3_A 165 EPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFL 240 (332)
T ss_dssp CTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGC
T ss_pred CcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCC
Confidence 77888888 89999999999985 555443 789999999999998777889999999999999999998777788888
Q ss_pred ccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCc------CCCcEEeccCCcc
Q 045539 435 KDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDL------SSLEVLDLSKNKI 508 (897)
Q Consensus 435 ~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l 508 (897)
++|++|++++| +++ .+|..+..+++|++|++++|++++..+..|... .+|+.|++++|.+
T Consensus 241 ~~L~~L~L~~N-------------~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~ 306 (332)
T 2ft3_A 241 PTLRELHLDNN-------------KLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPV 306 (332)
T ss_dssp TTCCEEECCSS-------------CCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSS
T ss_pred CCCCEEECCCC-------------cCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcc
Confidence 88885555544 444 567788889999999999999987777777653 6788999999988
Q ss_pred C--CCCchhhhhhcccceEeccCCc
Q 045539 509 S--GAIPASLQKLLYLKHLNLSFNK 531 (897)
Q Consensus 509 ~--~~~p~~~~~l~~L~~L~ls~N~ 531 (897)
. +..|..+..+++|+.+++++|+
T Consensus 307 ~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 307 PYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccCcccccccchhhhhhccccc
Confidence 7 5777888889999999998885
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.4e-32 Score=297.99 Aligned_cols=252 Identities=22% Similarity=0.321 Sum_probs=167.9
Q ss_pred CCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccccccc
Q 045539 100 SSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAF 179 (897)
Q Consensus 100 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L 179 (897)
.+|+.++++++.++ .+|..+. ++|++|+|++|++.+..+..|.++++|++|+|++|+++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~------------------ 89 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS------------------ 89 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCC------------------
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCC------------------
Confidence 35677777777766 4555443 45666666666655555545555555555555555555
Q ss_pred ccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEcccccccc
Q 045539 180 ATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSG 259 (897)
Q Consensus 180 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 259 (897)
++.|..|.++++|++|+|++|+++ .+|..++ ++|++|++++|.+++..+..+.++++|+.|++++|.+..
T Consensus 90 ------~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 159 (330)
T 1xku_A 90 ------KISPGAFAPLVKLERLYLSKNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS 159 (330)
T ss_dssp ------CBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG
T ss_pred ------eeCHHHhcCCCCCCEEECCCCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc
Confidence 444444555555555555555555 4554443 567777777777776666677778888888888887753
Q ss_pred --ccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccC
Q 045539 260 --FIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGN 337 (897)
Q Consensus 260 --~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~ 337 (897)
..+. .+.++++|++|++++|+++.+ |. .+
T Consensus 160 ~~~~~~---------------------~~~~l~~L~~L~l~~n~l~~l-~~-------------------------~~-- 190 (330)
T 1xku_A 160 SGIENG---------------------AFQGMKKLSYIRIADTNITTI-PQ-------------------------GL-- 190 (330)
T ss_dssp GGBCTT---------------------GGGGCTTCCEEECCSSCCCSC-CS-------------------------SC--
T ss_pred cCcChh---------------------hccCCCCcCEEECCCCccccC-Cc-------------------------cc--
Confidence 3332 245677888888888877642 21 11
Q ss_pred ccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceec
Q 045539 338 LGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLY 417 (897)
Q Consensus 338 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 417 (897)
.++|++|++++|++++..|..|.++++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|+
T Consensus 191 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 269 (330)
T 1xku_A 191 PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269 (330)
T ss_dssp CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEE
Confidence 157788888888888777777888888888888888887776777777888888888888887 6777777888888888
Q ss_pred cccccccCCcccccc
Q 045539 418 LGLNRFTSALPSTIW 432 (897)
Q Consensus 418 L~~N~l~~~~p~~~~ 432 (897)
+++|++++..+..|.
T Consensus 270 l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 270 LHNNNISAIGSNDFC 284 (330)
T ss_dssp CCSSCCCCCCTTSSS
T ss_pred CCCCcCCccChhhcC
Confidence 888888765555554
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=3.4e-32 Score=298.03 Aligned_cols=270 Identities=21% Similarity=0.236 Sum_probs=193.3
Q ss_pred cceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCcccc
Q 045539 64 CSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFF 143 (897)
Q Consensus 64 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 143 (897)
|+|+.+.|+ +++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|++.+..|..
T Consensus 31 c~l~~l~~~------------~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 95 (330)
T 1xku_A 31 CHLRVVQCS------------DLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA 95 (330)
T ss_dssp EETTEEECT------------TSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTT
T ss_pred CCCeEEEec------------CCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHH
Confidence 566666554 44555 5666554 68999999999999877779999999999999999999999999
Q ss_pred ccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCcccccccccc
Q 045539 144 IFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNV 223 (897)
Q Consensus 144 ~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L 223 (897)
|.++++|++|+|++|+++ .+|..+. ++|++|++++|+++++.+..|.++++|++|++++|+++..
T Consensus 96 ~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------ 160 (330)
T 1xku_A 96 FAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS------------ 160 (330)
T ss_dssp TTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGG------------
T ss_pred hcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCcc------------
Confidence 999999999999999998 6777665 7889999999998888888888888888888888877521
Q ss_pred ceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCC
Q 045539 224 ETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLD 303 (897)
Q Consensus 224 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~ 303 (897)
+..+..+.++++|++|++++|.++..... -.++|++|++++|+++
T Consensus 161 -----------~~~~~~~~~l~~L~~L~l~~n~l~~l~~~------------------------~~~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 161 -----------GIENGAFQGMKKLSYIRIADTNITTIPQG------------------------LPPSLTELHLDGNKIT 205 (330)
T ss_dssp -----------GBCTTGGGGCTTCCEEECCSSCCCSCCSS------------------------CCTTCSEEECTTSCCC
T ss_pred -----------CcChhhccCCCCcCEEECCCCccccCCcc------------------------ccccCCEEECCCCcCC
Confidence 13334455555566666666655532211 0145666666666655
Q ss_pred CCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhh
Q 045539 304 GILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDEL 383 (897)
Q Consensus 304 ~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 383 (897)
+. .|..|..+++|++|++++|++++..+..|..+++|++|+|++|+++ .+|..+
T Consensus 206 ~~-------------------------~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 259 (330)
T 1xku_A 206 KV-------------------------DAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259 (330)
T ss_dssp EE-------------------------CTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred cc-------------------------CHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh
Confidence 32 2344556667777777777777666666777777777777777777 566667
Q ss_pred hcccccccccccccccccCCCcccccc------cccceecccccccc
Q 045539 384 CHLARLHSLVLQGNKFSGSIPSCLGNL------TSLRVLYLGLNRFT 424 (897)
Q Consensus 384 ~~l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~ 424 (897)
..+++|++|++++|+|++..+..|... +.|+.|++++|.+.
T Consensus 260 ~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred ccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 777777777777777776555555432 44555555555553
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.1e-36 Score=350.13 Aligned_cols=287 Identities=19% Similarity=0.196 Sum_probs=134.4
Q ss_pred CCceecccCccccCcCCcc-ccCCCCCcEEeccCccccC----CccccccccccccEEEeeecCCCCCCCccc-cCcc--
Q 045539 101 SLQTLDLSHNKLSGNIPSS-IFNMHTLKLLYFSDNQLFG----SLSFFIFNVSSVTTIDLSINGLSGEMPREI-GNLP-- 172 (897)
Q Consensus 101 ~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l-~~l~-- 172 (897)
+|++|||++|+++...... +..+++|++|+|++|++.+ .++..+..+++|++|||++|.+....+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 3444444444443221111 3344444444444444432 123333444444444444444433222221 1222
Q ss_pred --cccccccccccccc----cccccccccccccccccccccccccCCccc----cccccccceeeccccccccc----cc
Q 045539 173 --YLARLAFATNNLVG----VAPVTIFNMSALKEIYLLNNSLSGSLPSRI----DLSLPNVETLNLGINSFYGT----VP 238 (897)
Q Consensus 173 --~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~~l~~L~~L~L~~N~l~~~----~p 238 (897)
+|++|+|++|+++. ..+..+.++++|++|+|++|++++..+..+ ....++|++|+|++|.+++. ++
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 35555555555442 224445555555555555555543222211 11234566666666655542 24
Q ss_pred ccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccc-cccCCCcEEEecCCCCCCCCCCcccCchHHH
Q 045539 239 SSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSL-TNCKKLKVLILTGNPLDGILPKSKGNLSLSL 317 (897)
Q Consensus 239 ~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 317 (897)
..+..+++|++|++++|.++...+..+.. .+ ...++|++|++++|++++.. .
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~-----------------~l~~~~~~L~~L~L~~n~l~~~~----------~ 216 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQ-----------------GLKDSPCQLEALKLESCGVTSDN----------C 216 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHH-----------------HHHHSCCCCCEEECTTSCCBTTH----------H
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHH-----------------HHhcCCCCceEEEccCCCCcHHH----------H
Confidence 45555667777777777665443322210 01 12346666666666655320 0
Q ss_pred HHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCc-----cccccCccchhhhcccCcccccc----cchhhhcccc
Q 045539 318 EIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPI-----PITFSQLQTLQALGLTRNKLAGP----ITDELCHLAR 388 (897)
Q Consensus 318 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~ 388 (897)
+ .++..+..+++|++|++++|++++.. +..+..+++|++|+|++|++++. ++..+..+++
T Consensus 217 ~-----------~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 285 (461)
T 1z7x_W 217 R-----------DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKES 285 (461)
T ss_dssp H-----------HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTT
T ss_pred H-----------HHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCC
Confidence 0 12334455666666666666665422 22233455666666666666543 3444555566
Q ss_pred cccccccccccccCCCcccccc-----cccceeccccccccC
Q 045539 389 LHSLVLQGNKFSGSIPSCLGNL-----TSLRVLYLGLNRFTS 425 (897)
Q Consensus 389 L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~ 425 (897)
|++|+|++|++++..+..+... ++|+.|++++|.+++
T Consensus 286 L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 327 (461)
T 1z7x_W 286 LKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTA 327 (461)
T ss_dssp CCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred cceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCch
Confidence 6666666666554333333221 355555555555543
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2e-35 Score=339.66 Aligned_cols=360 Identities=21% Similarity=0.205 Sum_probs=235.2
Q ss_pred CCCcEEeccCccccCCcccc-ccccccccEEEeeecCCCC----CCCccccCccccccccccccccccccccccc-ccc-
Q 045539 124 HTLKLLYFSDNQLFGSLSFF-IFNVSSVTTIDLSINGLSG----EMPREIGNLPYLARLAFATNNLVGVAPVTIF-NMS- 196 (897)
Q Consensus 124 ~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~LdLs~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~-~l~- 196 (897)
++|++|+|++|++....... +..+++|++|+|++|+++. .++..+..+++|++|+|++|++++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56788888888887654333 7778888888888888874 3456677778888888888887765544433 344
Q ss_pred ---cccccccccccccc----cCCccccccccccceeeccccccccccccccc-----CCCcccEEEccccccccccCcc
Q 045539 197 ---ALKEIYLLNNSLSG----SLPSRIDLSLPNVETLNLGINSFYGTVPSSIT-----NASKLSDLELGVNLFSGFIPNT 264 (897)
Q Consensus 197 ---~L~~L~L~~N~l~~----~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~~~~~ 264 (897)
+|++|+|++|+++. .+|..+ ..+++|++|+|++|.+++..+..+. ..++|++|+|++|.+++.....
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l-~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTL-RTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHT-TSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHH-ccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 57777777777763 233333 2566777777777776554443332 2446777777777666543222
Q ss_pred ccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccc-cCccCCcE
Q 045539 265 FVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVV-GNLGNLLV 343 (897)
Q Consensus 265 f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~ 343 (897)
+. ..+..+++|++|++++|++.+..+. .+ ...+ ...++|++
T Consensus 162 l~-----------------~~l~~~~~L~~L~L~~n~i~~~~~~----------~l-----------~~~l~~~~~~L~~ 203 (461)
T 1z7x_W 162 LA-----------------SVLRAKPDFKELTVSNNDINEAGVR----------VL-----------CQGLKDSPCQLEA 203 (461)
T ss_dssp HH-----------------HHHHHCTTCCEEECCSSBCHHHHHH----------HH-----------HHHHHHSCCCCCE
T ss_pred HH-----------------HHHhhCCCCCEEECcCCCcchHHHH----------HH-----------HHHHhcCCCCceE
Confidence 11 1234556677777776665432110 00 0011 12446777
Q ss_pred EEccCCCCCCC----ccccccCccchhhhcccCcccccccchh-----hhcccccccccccccccccC----CCcccccc
Q 045539 344 LELGGNNLTEP----IPITFSQLQTLQALGLTRNKLAGPITDE-----LCHLARLHSLVLQGNKFSGS----IPSCLGNL 410 (897)
Q Consensus 344 L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-----~~~l~~L~~L~L~~N~l~~~----~p~~~~~l 410 (897)
|++++|.+++. ++..+..+++|++|+|++|++++..... +..+++|++|++++|++++. ++..+.++
T Consensus 204 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 283 (461)
T 1z7x_W 204 LKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAK 283 (461)
T ss_dssp EECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC
T ss_pred EEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhC
Confidence 77777777664 3555666677777777777766533222 22356777777777777643 45556666
Q ss_pred cccceeccccccccCCcccccccc-----ccceEEeecCCcccccceeecccCcCCCC----CcccccCCcccccccccC
Q 045539 411 TSLRVLYLGLNRFTSALPSTIWNL-----KDILFIDVSSNSLNVLIGLNFSRNNLSGD----IPITIGGLKNLQQMFLEY 481 (897)
Q Consensus 411 ~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~ls~N~l~~l~~l~ls~n~l~~~----~p~~~~~l~~L~~L~ls~ 481 (897)
++|+.|++++|.+++..+..+... ++|+ .|++++|.+++. +|..+..+++|++|++++
T Consensus 284 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~-------------~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~ 350 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGARLLCETLLEPGCQLE-------------SLWVKSCSFTAACCSHFSSVLAQNRFLLELQISN 350 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCC-------------EEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCS
T ss_pred CCcceEECCCCCCchHHHHHHHHHhccCCccce-------------eeEcCCCCCchHHHHHHHHHHhhCCCccEEEccC
Confidence 777777777777665433333322 3444 666666666655 566778889999999999
Q ss_pred ceecccCCCCCCC-----cCCCcEEeccCCccCC----CCchhhhhhcccceEeccCCccccc
Q 045539 482 NRLEGSIPESFGD-----LSSLEVLDLSKNKISG----AIPASLQKLLYLKHLNLSFNKLEGE 535 (897)
Q Consensus 482 N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~ 535 (897)
|++++..+..+.. .++|++|+|++|++++ .+|..+..+++|++|+|++|++++.
T Consensus 351 n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 351 NRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp SBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred CccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 9998765555543 6799999999999986 7899999999999999999999864
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.9e-32 Score=301.45 Aligned_cols=294 Identities=20% Similarity=0.222 Sum_probs=218.6
Q ss_pred CCCCCCCcceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccc
Q 045539 57 WTSSTSVCSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQL 136 (897)
Q Consensus 57 w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 136 (897)
|.....+|.|.|+ |+ .++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++
T Consensus 23 ~~~~~~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 88 (353)
T 2z80_A 23 SNQASLSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGI 88 (353)
T ss_dssp ----CCEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCccCCCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCcc
Confidence 3334567999998 76 3556666 6777665 5899999999999977777899999999999999999
Q ss_pred cCCccccccccccccEEEeeecCCCCCCCccccCccccccccccccccccccc-ccccccccccccccccccccccCCcc
Q 045539 137 FGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAP-VTIFNMSALKEIYLLNNSLSGSLPSR 215 (897)
Q Consensus 137 ~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~ 215 (897)
.+..+..|.++++|++|||++|++++..+..|+++++|++|+|++|+++++.+ ..+.++++|++|++++|...+.++..
T Consensus 89 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 168 (353)
T 2z80_A 89 NTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRK 168 (353)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTT
T ss_pred CccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHH
Confidence 99889999999999999999999995444558999999999999999998766 57889999999999998533366655
Q ss_pred ccccccccceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEE
Q 045539 216 IDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVL 295 (897)
Q Consensus 216 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L 295 (897)
.+..+++|++|++++|.+++..|..+..+++|++|++++|.++...+.. +..+++|++|
T Consensus 169 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~---------------------~~~~~~L~~L 227 (353)
T 2z80_A 169 DFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIF---------------------VDVTSSVECL 227 (353)
T ss_dssp TTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHH---------------------HHHTTTEEEE
T ss_pred HccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhh---------------------hhhcccccEE
Confidence 5567888899999999888888888888888888888888876443322 2346788888
Q ss_pred EecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCccc
Q 045539 296 ILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKL 375 (897)
Q Consensus 296 ~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 375 (897)
++++|++++..+..+.. ....+.++.++|++|.+++ |.+
T Consensus 228 ~L~~n~l~~~~~~~l~~----------------------~~~~~~l~~l~L~~~~l~~-------------------~~l 266 (353)
T 2z80_A 228 ELRDTDLDTFHFSELST----------------------GETNSLIKKFTFRNVKITD-------------------ESL 266 (353)
T ss_dssp EEESCBCTTCCCC----------------------------CCCCCCEEEEESCBCCH-------------------HHH
T ss_pred ECCCCcccccccccccc----------------------ccccchhhccccccccccC-------------------cch
Confidence 88888887654332211 1223445566665555443 222
Q ss_pred ccccchhhhcccccccccccccccccCCCcc-cccccccceeccccccccCCcc
Q 045539 376 AGPITDELCHLARLHSLVLQGNKFSGSIPSC-LGNLTSLRVLYLGLNRFTSALP 428 (897)
Q Consensus 376 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p 428 (897)
. .+|+.+..+++|++|+|++|+++ .+|.. |.++++|+.|++++|++++..|
T Consensus 267 ~-~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 267 F-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp H-HHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred h-hhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 2 35666777777888888888887 44544 5778888888888888776544
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.5e-30 Score=281.60 Aligned_cols=283 Identities=23% Similarity=0.274 Sum_probs=202.3
Q ss_pred cceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCC--cc
Q 045539 64 CSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGS--LS 141 (897)
Q Consensus 64 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~ 141 (897)
|.|.+|.|+.. +++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|++... .+
T Consensus 7 C~~~~l~c~~~------------~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 71 (306)
T 2z66_A 7 CSGTEIRCNSK------------GLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS 71 (306)
T ss_dssp EETTEEECCSS------------CCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEE
T ss_pred eCCCEEEcCCC------------Ccc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcc
Confidence 89999998643 343 5666543 6899999999999855455689999999999999998743 36
Q ss_pred ccccccccccEEEeeecCCCCCCCccccCccccccccccccccccccc-ccccccccccccccccccccccCCccccccc
Q 045539 142 FFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAP-VTIFNMSALKEIYLLNNSLSGSLPSRIDLSL 220 (897)
Q Consensus 142 ~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l 220 (897)
..+.++++|++|+|++|.+. .+|..+..+++|++|++++|++++..+ ..+.++++|++|++++|++++..|.. +..+
T Consensus 72 ~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l 149 (306)
T 2z66_A 72 QSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI-FNGL 149 (306)
T ss_dssp HHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTT-TTTC
T ss_pred cccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhh-cccC
Confidence 67778899999999999988 577778888888888888888888765 56778888888888888887444433 3467
Q ss_pred cccceeecccccccc-cccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecC
Q 045539 221 PNVETLNLGINSFYG-TVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTG 299 (897)
Q Consensus 221 ~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~ 299 (897)
++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..|.. +.++++|++|+|++
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~---------------------~~~l~~L~~L~L~~ 208 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA---------------------FNSLSSLQVLNMSH 208 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT---------------------TTTCTTCCEEECTT
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHH---------------------hcCCCCCCEEECCC
Confidence 777777777777765 56777777777777777777777665543 34556677777777
Q ss_pred CCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCcc-chhhhcccCcccccc
Q 045539 300 NPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQ-TLQALGLTRNKLAGP 378 (897)
Q Consensus 300 N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~ 378 (897)
|++++. .+..+..+++|++|++++|++++..|..+..++ +|++|+|++|.+++.
T Consensus 209 N~l~~~-------------------------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 209 NNFFSL-------------------------DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SCCSBC-------------------------CSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CccCcc-------------------------ChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 766543 233456677778888888887777777777774 777777777777754
Q ss_pred cc--hhhhcccccccccccccccccCCCccccc
Q 045539 379 IT--DELCHLARLHSLVLQGNKFSGSIPSCLGN 409 (897)
Q Consensus 379 ~~--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 409 (897)
.+ .....+...+.+.+..+.+....|..+.+
T Consensus 264 c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 264 CEHQSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp GGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred cChHHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 32 11223444555566666666666665544
No 302
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.6e-30 Score=304.94 Aligned_cols=293 Identities=23% Similarity=0.260 Sum_probs=203.6
Q ss_pred cccccCCCCCCCCcceeeeEee------CCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCC
Q 045539 51 NLFARNWTSSTSVCSWIGITCD------VNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMH 124 (897)
Q Consensus 51 ~~~~~~w~~~~~~c~w~gv~c~------~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 124 (897)
..+. +|..+.+||.|+|..|. .....++.|++++++++ .+|..+. ++|++|+|++|+|+ .+|. .++
T Consensus 10 ~~w~-~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 10 AVWS-AWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp CHHH-HHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHH-HHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 3344 88888889999775432 12234788999999988 7888776 79999999999998 5665 578
Q ss_pred CCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccc
Q 045539 125 TLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLL 204 (897)
Q Consensus 125 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 204 (897)
+|++|+|++|+|++..+ .+++|++|+|++|++++ +|. .+++|+.|++++|+++++.+ .+++|++|+|+
T Consensus 82 ~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls 149 (622)
T 3g06_A 82 ELRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVS 149 (622)
T ss_dssp TCCEEEECSCCCSCCCC----CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECC
T ss_pred CCCEEEcCCCcCCcCCC----CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcCCC----CCCCCCEEECc
Confidence 89999999998875433 67888899999998884 555 56778888888888887633 24778888888
Q ss_pred cccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccc
Q 045539 205 NNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLS 284 (897)
Q Consensus 205 ~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~ 284 (897)
+|+++ .+|. .+++|+.|++++|.+++ +| ..+++|+.|++++|.++++.+
T Consensus 150 ~N~l~-~l~~----~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~---------------------- 198 (622)
T 3g06_A 150 DNQLA-SLPA----LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT---------------------- 198 (622)
T ss_dssp SSCCS-CCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----------------------
T ss_pred CCcCC-CcCC----ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC----------------------
Confidence 88887 4553 24567777777777764 34 345667777777777664321
Q ss_pred cccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccc
Q 045539 285 SLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQT 364 (897)
Q Consensus 285 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 364 (897)
.+++|+.|++++|.++.+ |. .+++|+.|+|++|+|++ +| ..+++
T Consensus 199 ---~~~~L~~L~L~~N~l~~l--------------------------~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~ 242 (622)
T 3g06_A 199 ---LPSELYKLWAYNNRLTSL--------------------------PA---LPSGLKELIVSGNRLTS-LP---VLPSE 242 (622)
T ss_dssp ---CCTTCCEEECCSSCCSSC--------------------------CC---CCTTCCEEECCSSCCSC-CC---CCCTT
T ss_pred ---ccchhhEEECcCCccccc--------------------------CC---CCCCCCEEEccCCccCc-CC---CCCCc
Confidence 125666677776666532 11 13567777777777776 44 34566
Q ss_pred hhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccc
Q 045539 365 LQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLK 435 (897)
Q Consensus 365 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 435 (897)
|+.|+|++|+|++ +|. .+++|++|+|++|+|+ .+|..+.++++|+.|+|++|++++..|..+..++
T Consensus 243 L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 243 LKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 7777777777773 444 4566777777777777 5677777777777777777777766666555443
No 303
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=4.4e-32 Score=296.00 Aligned_cols=289 Identities=18% Similarity=0.252 Sum_probs=165.6
Q ss_pred HhccccCCCcccccCCCC--CCCCcceeeeEeeCCCCeEEEEEeecccccccCCCCC--CCCCCCceecccCccccCcCC
Q 045539 42 KAHISYDHTNLFARNWTS--STSVCSWIGITCDVNSHRVIGLNISSFNLQGTIPPQL--GNLSSLQTLDLSHNKLSGNIP 117 (897)
Q Consensus 42 k~~~~~~~~~~~~~~w~~--~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l--~~l~~L~~L~Ls~n~l~~~~p 117 (897)
|+++ .|+..++. .|.. ..++|.|.++-|.............+.... .++..+ ...++++.|+|++|+++ .+|
T Consensus 22 ~~~~-~~~~~aLl-~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~-~~~~~l~~~~~~~l~~L~L~~n~l~-~lp 97 (328)
T 4fcg_A 22 STAL-RPYHDVLS-QWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFP 97 (328)
T ss_dssp -CCC-CCHHHHHH-HHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHH-HHHHHHHHHTSTTCCEEEEESSCCS-SCC
T ss_pred cccC-chHHHHHH-HHHHhccCCchhhhhhhcccccccccccccCCcchh-hhHHHHhcccccceeEEEccCCCch-hcC
Confidence 3444 35555665 7875 357899999888432210000011111110 111111 13467788888888887 677
Q ss_pred ccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccccccccccccccccccccccccc
Q 045539 118 SSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSA 197 (897)
Q Consensus 118 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 197 (897)
..++++++|++|+|++|++. .+|..+.++++|++|+|++|+++ .+|..|++ +++
T Consensus 98 ~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~------------------------l~~ 151 (328)
T 4fcg_A 98 DQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIAS------------------------LNR 151 (328)
T ss_dssp SCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGG------------------------CTT
T ss_pred hhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhc------------------------CcC
Confidence 77777888888877777776 56666666777777777777666 55555544 455
Q ss_pred ccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccCCC
Q 045539 198 LKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSST 277 (897)
Q Consensus 198 L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~ 277 (897)
|++|+|++|++.+.+|..+.. ...+..+.++++|++|+|++|.++ .+|..
T Consensus 152 L~~L~L~~n~~~~~~p~~~~~----------------~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~------------- 201 (328)
T 4fcg_A 152 LRELSIRACPELTELPEPLAS----------------TDASGEHQGLVNLQSLRLEWTGIR-SLPAS------------- 201 (328)
T ss_dssp CCEEEEEEETTCCCCCSCSEE----------------EC-CCCEEESTTCCEEEEEEECCC-CCCGG-------------
T ss_pred CCEEECCCCCCccccChhHhh----------------ccchhhhccCCCCCEEECcCCCcC-cchHh-------------
Confidence 555555555555555544321 011233455566666666666655 22322
Q ss_pred CcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccc
Q 045539 278 PELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPI 357 (897)
Q Consensus 278 ~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 357 (897)
+.++++|++|+|++|+++++ |..++.+++|++|+|++|++.+.+|.
T Consensus 202 --------l~~l~~L~~L~L~~N~l~~l--------------------------~~~l~~l~~L~~L~Ls~n~~~~~~p~ 247 (328)
T 4fcg_A 202 --------IANLQNLKSLKIRNSPLSAL--------------------------GPAIHHLPKLEELDLRGCTALRNYPP 247 (328)
T ss_dssp --------GGGCTTCCEEEEESSCCCCC--------------------------CGGGGGCTTCCEEECTTCTTCCBCCC
T ss_pred --------hcCCCCCCEEEccCCCCCcC--------------------------chhhccCCCCCEEECcCCcchhhhHH
Confidence 34455666666666655531 22345566666666666666666666
Q ss_pred cccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceecccccccc
Q 045539 358 TFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFT 424 (897)
Q Consensus 358 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 424 (897)
.|.++++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..++++++|+.+++..|.+.
T Consensus 248 ~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 248 IFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred HhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 6666666666666666666666666666666666666666666666666666666666666655443
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.3e-30 Score=284.96 Aligned_cols=277 Identities=18% Similarity=0.202 Sum_probs=210.7
Q ss_pred CCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccccccc
Q 045539 100 SSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAF 179 (897)
Q Consensus 100 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L 179 (897)
+.....|+++|+++ .+|..+. ++|++|+|++|++.+..+..+.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 33445788999998 7887766 58999999999999888889999999999999999999877888999999999999
Q ss_pred ccccccccccccccccccccccccccccccccCCc-cccccccccceeecccc-cccccccccccCCCcccEEEcccccc
Q 045539 180 ATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPS-RIDLSLPNVETLNLGIN-SFYGTVPSSITNASKLSDLELGVNLF 257 (897)
Q Consensus 180 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~L~~N~l 257 (897)
++|+++++.+..|.++++|++|+|++|+++ .+|. ..+..+++|++|++++| .+....+..+.++++|++|++++|.+
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 999999988877999999999999999998 6776 56667888899999888 46666677888888888888888888
Q ss_pred ccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccC
Q 045539 258 SGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGN 337 (897)
Q Consensus 258 ~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~ 337 (897)
++..|.. +.++++|++|++++|++... .+..+..
T Consensus 187 ~~~~~~~---------------------l~~l~~L~~L~l~~n~l~~~-------------------------~~~~~~~ 220 (353)
T 2z80_A 187 QSYEPKS---------------------LKSIQNVSHLILHMKQHILL-------------------------LEIFVDV 220 (353)
T ss_dssp CEECTTT---------------------TTTCSEEEEEEEECSCSTTH-------------------------HHHHHHH
T ss_pred CccCHHH---------------------HhccccCCeecCCCCccccc-------------------------hhhhhhh
Confidence 7776654 35567788888888776522 1112344
Q ss_pred ccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhccccccccccccccccc----CCCccccccccc
Q 045539 338 LGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSG----SIPSCLGNLTSL 413 (897)
Q Consensus 338 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L 413 (897)
+++|++|++++|++++..+..+... ...+.++.++|++|.+++ .+|..+.++++|
T Consensus 221 ~~~L~~L~L~~n~l~~~~~~~l~~~---------------------~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L 279 (353)
T 2z80_A 221 TSSVECLELRDTDLDTFHFSELSTG---------------------ETNSLIKKFTFRNVKITDESLFQVMKLLNQISGL 279 (353)
T ss_dssp TTTEEEEEEESCBCTTCCCC---------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTC
T ss_pred cccccEEECCCCccccccccccccc---------------------cccchhhccccccccccCcchhhhHHHHhcccCC
Confidence 6778888888888877544433221 112233334444444433 577889999999
Q ss_pred ceeccccccccCCcccc-ccccccceEEeecCCccc
Q 045539 414 RVLYLGLNRFTSALPST-IWNLKDILFIDVSSNSLN 448 (897)
Q Consensus 414 ~~L~L~~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~ 448 (897)
+.|++++|+++. +|.. |..+++|++|++++|.+.
T Consensus 280 ~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~~~ 314 (353)
T 2z80_A 280 LELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWD 314 (353)
T ss_dssp CEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBC
T ss_pred CEEECCCCCCCc-cCHHHHhcCCCCCEEEeeCCCcc
Confidence 999999999995 5554 688999997777666654
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.9e-33 Score=332.34 Aligned_cols=434 Identities=15% Similarity=0.089 Sum_probs=277.0
Q ss_pred CcceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccc---cCcCCcccc------------CCCCCc
Q 045539 63 VCSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKL---SGNIPSSIF------------NMHTLK 127 (897)
Q Consensus 63 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l---~~~~p~~~~------------~l~~L~ 127 (897)
|++|.++.+.. .+. +.+.. .....++..+..+++|++|+|+++.. .+.+|..++ ++++|+
T Consensus 41 ck~W~~~~~~~--~~~--l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSET--REH--VTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHH--CCE--EEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhcc--ccE--EEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 55899995432 122 22222 23333444566788899999987532 234554444 789999
Q ss_pred EEeccCccccCCcccccccc--ccccEEEeeecC-CCC-CCCccccCccccccccccccccccc----cccccccccccc
Q 045539 128 LLYFSDNQLFGSLSFFIFNV--SSVTTIDLSING-LSG-EMPREIGNLPYLARLAFATNNLVGV----APVTIFNMSALK 199 (897)
Q Consensus 128 ~L~Ls~N~l~~~~~~~~~~l--~~L~~LdLs~N~-l~~-~~p~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~ 199 (897)
+|+|++|.+.+..+..+... .+|++|+|++|. ++. .++....++++|++|+|++|.+++. .+..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999998887777777764 459999999886 211 1222334788999999999988766 334556788999
Q ss_pred ccccccccccc----cCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccC
Q 045539 200 EIYLLNNSLSG----SLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTS 275 (897)
Q Consensus 200 ~L~L~~N~l~~----~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~ 275 (897)
+|++++|.+++ .++. +...+++|++|+|++|.+.+ +|..+.++++|++|+++++......+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~------------ 261 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLET-IARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPE------------ 261 (592)
T ss_dssp EEECTTCCCSSCCHHHHHH-HHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTT------------
T ss_pred EEEeeccCCCccCHHHHHH-HHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHH------------
Confidence 99999999872 2222 23367899999999998875 678888999999999986432211111
Q ss_pred CCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcC-ccccCccCCcEEEccCCCCCC-
Q 045539 276 STPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIP-QVVGNLGNLLVLELGGNNLTE- 353 (897)
Q Consensus 276 ~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~- 353 (897)
....+..+++|+.|+++++.. +.+|..+..++ +|++|++++|.+++... ..+..+++|++|+++ |.+++
T Consensus 262 ------~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~-~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~ 332 (592)
T 3ogk_B 262 ------KYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAA-QIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDR 332 (592)
T ss_dssp ------SSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGG-GCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHH
T ss_pred ------HHHHhhccccccccCccccch-hHHHHHHhhcC-CCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHH
Confidence 112356778888888887533 23344444443 56666666666554332 335666777777776 33322
Q ss_pred CccccccCccchhhhccc-----------Ccccccccc-hhhhcccccccccccccccccCCCccccc-ccccceeccc-
Q 045539 354 PIPITFSQLQTLQALGLT-----------RNKLAGPIT-DELCHLARLHSLVLQGNKFSGSIPSCLGN-LTSLRVLYLG- 419 (897)
Q Consensus 354 ~~~~~~~~l~~L~~L~Ls-----------~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~- 419 (897)
.++..+..+++|++|+|+ .|.+++... ..+..+++|++|+++.|++++..+..++. +++|+.|+++
T Consensus 333 ~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~ 412 (592)
T 3ogk_B 333 GLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVL 412 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEE
T ss_pred HHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEee
Confidence 223333456667777776 245554322 22334667777777667776655555544 6667777774
Q ss_pred ---cccccCC-----ccccccccccceEEeecCCcccccceeecccCcCCCCCcccccC-CcccccccccCceecc-cCC
Q 045539 420 ---LNRFTSA-----LPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGG-LKNLQQMFLEYNRLEG-SIP 489 (897)
Q Consensus 420 ---~N~l~~~-----~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~-l~~L~~L~ls~N~l~~-~~p 489 (897)
.|.+++. ++..+.++++|+.|+++++ .+.+++..+..++. +++|++|++++|++++ .++
T Consensus 413 ~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~-----------~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 481 (592)
T 3ogk_B 413 LDREERITDLPLDNGVRSLLIGCKKLRRFAFYLR-----------QGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLM 481 (592)
T ss_dssp CSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECC-----------GGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHH
T ss_pred cCCCccccCchHHHHHHHHHHhCCCCCEEEEecC-----------CCCccHHHHHHHHHhCccceEeeccCCCCCHHHHH
Confidence 5556542 3333455666665544321 12244444444443 7889999999999876 345
Q ss_pred CCCCCcCCCcEEeccCCccCCC-CchhhhhhcccceEeccCCccccc
Q 045539 490 ESFGDLSSLEVLDLSKNKISGA-IPASLQKLLYLKHLNLSFNKLEGE 535 (897)
Q Consensus 490 ~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~ 535 (897)
..+..+++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++.
T Consensus 482 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 482 EFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 5567788999999999998754 445556789999999999997753
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.1e-31 Score=287.58 Aligned_cols=251 Identities=18% Similarity=0.159 Sum_probs=170.1
Q ss_pred CCCCCceecccCccccCcCCccccCCCCCcEEeccCcccc-CCcccccc-------ccccccEEEeeecCCCCCCCccc-
Q 045539 98 NLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLF-GSLSFFIF-------NVSSVTTIDLSINGLSGEMPREI- 168 (897)
Q Consensus 98 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~-------~l~~L~~LdLs~N~l~~~~p~~l- 168 (897)
..++|++|++++|.+ .+|..+... |++|+|++|++. ..+|..+. ++++|++|+|++|++++.+|..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 345666777777776 566655544 667777777763 34454444 56677777777777776677665
Q ss_pred -cCccccccccccccccccccccccccc-----ccccccccccccccccCCccccccccccceeeccccccccc--cccc
Q 045539 169 -GNLPYLARLAFATNNLVGVAPVTIFNM-----SALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGT--VPSS 240 (897)
Q Consensus 169 -~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~--~p~~ 240 (897)
+.+++|++|+|++|++++. |..+.++ ++|++|+|++|++++ ++...+..+++|++|+|++|++.+. .|..
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLN-FSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCC-CCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCcc-chHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 6777777777777777776 6666666 677777777777763 3333334677777777777776654 2334
Q ss_pred c--cCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHH
Q 045539 241 I--TNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLE 318 (897)
Q Consensus 241 l--~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~ 318 (897)
+ ..+++|++|+|++|++++...... ..+.++++|++|+|++|++++..|.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~------------------~~~~~l~~L~~L~Ls~N~l~~~~~~---------- 246 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCS------------------ALAAARVQLQGLDLSHNSLRDAAGA---------- 246 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHH------------------HHHHTTCCCSEEECTTSCCCSSCCC----------
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHH------------------HHHhcCCCCCEEECCCCcCCcccch----------
Confidence 4 778888888888888874221100 0134668888888888888865431
Q ss_pred HHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccc
Q 045539 319 IILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNK 398 (897)
Q Consensus 319 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 398 (897)
..+..+++|++|+|++|+|+. +|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|+
T Consensus 247 --------------~~~~~l~~L~~L~Ls~N~l~~-ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~ 307 (312)
T 1wwl_A 247 --------------PSCDWPSQLNSLNLSFTGLKQ-VPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNP 307 (312)
T ss_dssp --------------SCCCCCTTCCEEECTTSCCSS-CCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCT
T ss_pred --------------hhhhhcCCCCEEECCCCccCh-hhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCC
Confidence 224456788888888888884 666665 7888888888888865 55 7888888888888888
Q ss_pred ccc
Q 045539 399 FSG 401 (897)
Q Consensus 399 l~~ 401 (897)
+++
T Consensus 308 l~~ 310 (312)
T 1wwl_A 308 FLD 310 (312)
T ss_dssp TTC
T ss_pred CCC
Confidence 874
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.7e-29 Score=273.38 Aligned_cols=276 Identities=22% Similarity=0.243 Sum_probs=194.2
Q ss_pred cccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEcccccccccc--CccccccccccccCC
Q 045539 199 KEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFI--PNTFVNMADNYLTSS 276 (897)
Q Consensus 199 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~--~~~f~~l~~~~l~~~ 276 (897)
+.++++++.++ .+|..+. ++|++|+|++|.++...+..|.++++|++|+|++|.++... +..
T Consensus 10 ~~l~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~------------ 73 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQS------------ 73 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHH------------
T ss_pred CEEEcCCCCcc-cCCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccc------------
Confidence 35566666665 5665443 46677777777776444445677777777777777765332 221
Q ss_pred CCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCcc
Q 045539 277 TPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIP 356 (897)
Q Consensus 277 ~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 356 (897)
+..+++|++|+|++|++.+ +|..+..+++|++|++++|++++..+
T Consensus 74 ---------~~~~~~L~~L~Ls~n~i~~--------------------------l~~~~~~l~~L~~L~l~~n~l~~~~~ 118 (306)
T 2z66_A 74 ---------DFGTTSLKYLDLSFNGVIT--------------------------MSSNFLGLEQLEHLDFQHSNLKQMSE 118 (306)
T ss_dssp ---------HHSCSCCCEEECCSCSEEE--------------------------EEEEEETCTTCCEEECTTSEEESSTT
T ss_pred ---------cccccccCEEECCCCcccc--------------------------ChhhcCCCCCCCEEECCCCccccccc
Confidence 2345677777777776652 33446667778888888887776554
Q ss_pred -ccccCccchhhhcccCcccccccchhhhccccccccccccccccc-CCCcccccccccceeccccccccCCcccccccc
Q 045539 357 -ITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSG-SIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNL 434 (897)
Q Consensus 357 -~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 434 (897)
..+..+++|++|++++|++.+..+..+..+++|++|++++|++++ .+|..+..+++|+.|++++|++++..|..+..+
T Consensus 119 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 198 (306)
T 2z66_A 119 FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 198 (306)
T ss_dssp TTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred chhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCC
Confidence 567777788888888888777777777778888888888888876 567788888888888888888887777778777
Q ss_pred ccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcC-CCcEEeccCCccCCCCc
Q 045539 435 KDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLS-SLEVLDLSKNKISGAIP 513 (897)
Q Consensus 435 ~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p 513 (897)
++|+. |+|++|++++..+..+..+++|++|++++|++++..|..+..++ +|++|+|++|.+++.-+
T Consensus 199 ~~L~~-------------L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 199 SSLQV-------------LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp TTCCE-------------EECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CCCCE-------------EECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 77774 44444555555566778888999999999999988888888884 89999999999986532
Q ss_pred --hhhhhhcccceEeccCCcccccCCC
Q 045539 514 --ASLQKLLYLKHLNLSFNKLEGEIPR 538 (897)
Q Consensus 514 --~~~~~l~~L~~L~ls~N~l~~~~p~ 538 (897)
....-+...+.+.+..|.+.+..|.
T Consensus 266 ~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 266 HQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp GHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred hHHHHHHHHhhhhhhccccccccCCch
Confidence 2223344555666777777777665
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=5.9e-29 Score=284.46 Aligned_cols=173 Identities=20% Similarity=0.207 Sum_probs=116.3
Q ss_pred cccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCC
Q 045539 85 SFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEM 164 (897)
Q Consensus 85 ~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~ 164 (897)
+.+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|.+..+..|.++++|++|+|++|++++..
T Consensus 63 ~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 139 (452)
T 3zyi_A 63 RRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIP 139 (452)
T ss_dssp SSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCC
T ss_pred CCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccC
Confidence 34444 4665554 57888888888888777778888888888888888887777777888888888888888887655
Q ss_pred CccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCC
Q 045539 165 PREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNA 244 (897)
Q Consensus 165 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 244 (897)
+..|+++++|++|+|++|+++.+.+..|.++++|++|+|++|...+.++...+..+++|++|+|++|.+++. | .+..+
T Consensus 140 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l 217 (452)
T 3zyi_A 140 SGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPL 217 (452)
T ss_dssp TTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTC
T ss_pred hhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-ccccc
Confidence 566777777888887777777777777777777777777775444455555555555555555555555432 2 34444
Q ss_pred CcccEEEccccccccccC
Q 045539 245 SKLSDLELGVNLFSGFIP 262 (897)
Q Consensus 245 ~~L~~L~L~~N~l~~~~~ 262 (897)
++|+.|+|++|.+++..|
T Consensus 218 ~~L~~L~Ls~N~l~~~~~ 235 (452)
T 3zyi_A 218 VGLEELEMSGNHFPEIRP 235 (452)
T ss_dssp TTCCEEECTTSCCSEECG
T ss_pred ccccEEECcCCcCcccCc
Confidence 444444444444444333
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.5e-28 Score=278.30 Aligned_cols=174 Identities=20% Similarity=0.229 Sum_probs=136.3
Q ss_pred ecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCC
Q 045539 84 SSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGE 163 (897)
Q Consensus 84 ~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ 163 (897)
++.+++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++.+..+..|.++++|++|+|++|++++.
T Consensus 51 ~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~ 127 (440)
T 3zyj_A 51 VRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTI 127 (440)
T ss_dssp CSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSC
T ss_pred CCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCee
Confidence 344555 6777665 7899999999999988889999999999999999999998889999999999999999999966
Q ss_pred CCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccC
Q 045539 164 MPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITN 243 (897)
Q Consensus 164 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 243 (897)
.+..|..+++|++|+|++|+++.+.+..|.++++|++|+|++|...+.++...+..+++|++|+|++|.++. +| .+..
T Consensus 128 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~ 205 (440)
T 3zyj_A 128 PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTP 205 (440)
T ss_dssp CTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTT
T ss_pred CHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCC
Confidence 666799999999999999999988888888899999999988655556666666666666666666666652 22 3445
Q ss_pred CCcccEEEccccccccccC
Q 045539 244 ASKLSDLELGVNLFSGFIP 262 (897)
Q Consensus 244 l~~L~~L~L~~N~l~~~~~ 262 (897)
+++|+.|+|++|.+++..|
T Consensus 206 l~~L~~L~Ls~N~l~~~~~ 224 (440)
T 3zyj_A 206 LIKLDELDLSGNHLSAIRP 224 (440)
T ss_dssp CSSCCEEECTTSCCCEECT
T ss_pred CcccCEEECCCCccCccCh
Confidence 5555555555555544444
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.5e-30 Score=282.31 Aligned_cols=256 Identities=19% Similarity=0.177 Sum_probs=203.0
Q ss_pred ccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCC-CCCCCcccc-------Cccccccccccccccccccc
Q 045539 118 SSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGL-SGEMPREIG-------NLPYLARLAFATNNLVGVAP 189 (897)
Q Consensus 118 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l-~~~~p~~l~-------~l~~L~~L~L~~N~l~~~~~ 189 (897)
+.++..++|++|++++|++ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++..|
T Consensus 37 ~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 112 (312)
T 1wwl_A 37 ELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAP 112 (312)
T ss_dssp EEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCC
T ss_pred EEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhH
Confidence 3567788999999999999 677766655 99999999999 556787776 89999999999999999888
Q ss_pred ccc--cccccccccccccccccccCCccccccc-----cccceeecccccccccccccccCCCcccEEEccccccccccC
Q 045539 190 VTI--FNMSALKEIYLLNNSLSGSLPSRIDLSL-----PNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIP 262 (897)
Q Consensus 190 ~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 262 (897)
..+ .++++|++|+|++|++++. |..+. .+ ++|++|+|++|++.+..|..|+++++|++|+|++|++.+..+
T Consensus 113 ~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~-~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 190 (312)
T 1wwl_A 113 PPLLEATGPDLNILNLRNVSWATR-DAWLA-ELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG 190 (312)
T ss_dssp CCSSSCCSCCCSEEEEESCBCSSS-SSHHH-HHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHH
T ss_pred HHHHHhcCCCccEEEccCCCCcch-hHHHH-HHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchH
Confidence 876 8999999999999999965 65443 44 899999999999999988999999999999999999876522
Q ss_pred --ccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccC
Q 045539 263 --NTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGN 340 (897)
Q Consensus 263 --~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~ 340 (897)
..+ .+.++++|++|+|++|++++.. . .....+..+++
T Consensus 191 ~~~~~-------------------~~~~l~~L~~L~L~~N~l~~~~-----~-----------------~~~~~~~~l~~ 229 (312)
T 1wwl_A 191 LISAL-------------------CPLKFPTLQVLALRNAGMETPS-----G-----------------VCSALAAARVQ 229 (312)
T ss_dssp HHHHS-------------------CTTSCTTCCEEECTTSCCCCHH-----H-----------------HHHHHHHTTCC
T ss_pred HHHHH-------------------HhccCCCCCEEECCCCcCcchH-----H-----------------HHHHHHhcCCC
Confidence 111 1267789999999999887420 0 11123456788
Q ss_pred CcEEEccCCCCCCCcc-ccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccc
Q 045539 341 LLVLELGGNNLTEPIP-ITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLG 419 (897)
Q Consensus 341 L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 419 (897)
|++|++++|++++.+| ..+..+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|+++
T Consensus 230 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~ 304 (312)
T 1wwl_A 230 LQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLK 304 (312)
T ss_dssp CSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECT
T ss_pred CCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEecc
Confidence 9999999999988764 45666788888888888887 5666555 6777777777777754 55 7777777777777
Q ss_pred cccccC
Q 045539 420 LNRFTS 425 (897)
Q Consensus 420 ~N~l~~ 425 (897)
+|++++
T Consensus 305 ~N~l~~ 310 (312)
T 1wwl_A 305 GNPFLD 310 (312)
T ss_dssp TCTTTC
T ss_pred CCCCCC
Confidence 777764
No 311
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.3e-29 Score=291.64 Aligned_cols=148 Identities=18% Similarity=0.121 Sum_probs=91.3
Q ss_pred chhhhcccCcccccccchhhhcccccccccccccccccCCCcccc-cccccceeccccccccCCccccccccccceEEee
Q 045539 364 TLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLG-NLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDV 442 (897)
Q Consensus 364 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 442 (897)
+|+.|+|++|++++..|..+..+++|++|+|++|++++.+|..+. .+++|+.|+|++|.+++. |. ...+++|+
T Consensus 121 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~---- 194 (487)
T 3oja_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLK---- 194 (487)
T ss_dssp SCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCC----
T ss_pred CCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCC----
Confidence 344444444444444444444444444455555555444444443 455555555555555543 11 11244444
Q ss_pred cCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccC-CCCchhhhhhcc
Q 045539 443 SSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKIS-GAIPASLQKLLY 521 (897)
Q Consensus 443 s~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~ 521 (897)
.|+|++|.+++ +|+.++.+++|+.|+|++|+|++ +|..+..+++|+.|++++|.++ +.+|..+..++.
T Consensus 195 ---------~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~ 263 (487)
T 3oja_A 195 ---------TLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQR 263 (487)
T ss_dssp ---------EEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHH
T ss_pred ---------EEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCC
Confidence 33344444443 34447778888888888888885 7888889999999999999998 778888999999
Q ss_pred cceEecc
Q 045539 522 LKHLNLS 528 (897)
Q Consensus 522 L~~L~ls 528 (897)
|+.++++
T Consensus 264 L~~l~~~ 270 (487)
T 3oja_A 264 VQTVAKQ 270 (487)
T ss_dssp HHHHHHH
T ss_pred CcEEecc
Confidence 9888886
No 312
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.9e-28 Score=262.22 Aligned_cols=179 Identities=22% Similarity=0.231 Sum_probs=132.3
Q ss_pred EEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeec
Q 045539 79 IGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSIN 158 (897)
Q Consensus 79 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N 158 (897)
+.++.++++++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++.+..+..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45667777777 566544 578999999999999777788999999999999999998888888999999999999999
Q ss_pred C-CCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccc
Q 045539 159 G-LSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTV 237 (897)
Q Consensus 159 ~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~ 237 (897)
. +....|..|..+++|++|++++|+++++.|..|.++++|++|++++|+++ .+|...+..+++|++|+|++|++++..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-ccCHhHhccCCCccEEECCCCcccccC
Confidence 7 77655788888888888888888888887877888888888888888776 444444445555666666665555444
Q ss_pred cccccCCCcccEEEcccccccccc
Q 045539 238 PSSITNASKLSDLELGVNLFSGFI 261 (897)
Q Consensus 238 p~~l~~l~~L~~L~L~~N~l~~~~ 261 (897)
+..+..+++|++|++++|.+++..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~ 193 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVH 193 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEEC
T ss_pred HHHhcCccccCEEECCCCcccccC
Confidence 444555555555555555444433
No 313
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2.1e-28 Score=279.99 Aligned_cols=246 Identities=22% Similarity=0.240 Sum_probs=165.5
Q ss_pred ceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccc
Q 045539 103 QTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATN 182 (897)
Q Consensus 103 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N 182 (897)
+.++.+++.++ .+|..+. ++|++|+|++|+|.+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 45677778887 6776665 67888888888888777777777888888888888777666677777777777777777
Q ss_pred cccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccc-ccccc
Q 045539 183 NLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNL-FSGFI 261 (897)
Q Consensus 183 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~ 261 (897)
+++.+.+..|.++++|++|+|++|+++ .+|.. .|.++++|++|+|++|. +....
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~------------------------~~~~l~~L~~L~l~~~~~l~~i~ 188 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSY------------------------AFNRVPSLMRLDLGELKKLEYIS 188 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCC-EECTT------------------------TTTTCTTCCEEECCCCTTCCEEC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcc-eeCHh------------------------HHhcCCcccEEeCCCCCCccccC
Confidence 777666666666666666666666665 44443 44455555555555532 22222
Q ss_pred CccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCC
Q 045539 262 PNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNL 341 (897)
Q Consensus 262 ~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L 341 (897)
+. .+.++++|++|+|++|+++++ | .+..+++|
T Consensus 189 ~~---------------------~~~~l~~L~~L~L~~n~l~~~-~--------------------------~~~~l~~L 220 (452)
T 3zyi_A 189 EG---------------------AFEGLFNLKYLNLGMCNIKDM-P--------------------------NLTPLVGL 220 (452)
T ss_dssp TT---------------------TTTTCTTCCEEECTTSCCSSC-C--------------------------CCTTCTTC
T ss_pred hh---------------------hccCCCCCCEEECCCCccccc-c--------------------------cccccccc
Confidence 21 134556666666666666532 1 14456677
Q ss_pred cEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccc
Q 045539 342 LVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLN 421 (897)
Q Consensus 342 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 421 (897)
++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 221 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 300 (452)
T 3zyi_A 221 EELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300 (452)
T ss_dssp CEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSS
T ss_pred cEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCC
Confidence 77777777777766777777777777777777777666667777777777777777777666666677777777777777
Q ss_pred ccc
Q 045539 422 RFT 424 (897)
Q Consensus 422 ~l~ 424 (897)
.+.
T Consensus 301 p~~ 303 (452)
T 3zyi_A 301 PWN 303 (452)
T ss_dssp CEE
T ss_pred CcC
Confidence 665
No 314
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.5e-28 Score=261.36 Aligned_cols=255 Identities=21% Similarity=0.225 Sum_probs=189.5
Q ss_pred ceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccc
Q 045539 103 QTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATN 182 (897)
Q Consensus 103 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N 182 (897)
++++.+++.++ .+|..+ .++|++|+|++|++.+..+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 68899999998 677655 478999999999999888888999999999999999999777888999999999999999
Q ss_pred c-ccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEcccccccccc
Q 045539 183 N-LVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFI 261 (897)
Q Consensus 183 ~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 261 (897)
+ ++.+.|..|.++++|++|++++|++++ ++...+..+++|++|+|++|.+++..+..+..+++|++|+|++|.+++..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCE-ECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 7 888888888888889999888888884 44444446778888888888887666666777777888877777777655
Q ss_pred CccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCC
Q 045539 262 PNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNL 341 (897)
Q Consensus 262 ~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L 341 (897)
+.. +.++++|++|+|++|++++. .|..|..+++|
T Consensus 170 ~~~---------------------~~~l~~L~~L~l~~n~l~~~-------------------------~~~~~~~l~~L 203 (285)
T 1ozn_A 170 ERA---------------------FRGLHSLDRLLLHQNRVAHV-------------------------HPHAFRDLGRL 203 (285)
T ss_dssp TTT---------------------TTTCTTCCEEECCSSCCCEE-------------------------CTTTTTTCTTC
T ss_pred HHH---------------------hcCccccCEEECCCCccccc-------------------------CHhHccCcccc
Confidence 543 34566777777777766543 34455566677
Q ss_pred cEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccc
Q 045539 342 LVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLG 408 (897)
Q Consensus 342 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 408 (897)
+.|++++|++++..+..|..+++|+.|+|++|.+....+.. .....++.+..+.|.+....|..+.
T Consensus 204 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 204 MTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp CEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGT
T ss_pred cEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhC
Confidence 77777777777766666777777777777777776543321 1223455556666666666666554
No 315
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=278.12 Aligned_cols=246 Identities=23% Similarity=0.258 Sum_probs=164.3
Q ss_pred ceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccc
Q 045539 103 QTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATN 182 (897)
Q Consensus 103 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N 182 (897)
+.++.++++++ .+|..+. +++++|+|++|++.+..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 46788888888 7887666 67888999998888777777777777777777777777655566777777777777777
Q ss_pred cccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccc-ccccc
Q 045539 183 NLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNL-FSGFI 261 (897)
Q Consensus 183 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~ 261 (897)
+++.+.+..|.++++|++|+|++|+++ .+|. ..|.++++|++|+|++|. +....
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~------------------------~~~~~l~~L~~L~l~~~~~l~~i~ 177 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIE-SIPS------------------------YAFNRIPSLRRLDLGELKRLSYIS 177 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCC-EECT------------------------TTTTTCTTCCEEECCCCTTCCEEC
T ss_pred cCCeeCHhHhhccccCceeeCCCCccc-ccCH------------------------HHhhhCcccCEeCCCCCCCcceeC
Confidence 666666666666666666666666665 3333 344555555555555532 22222
Q ss_pred CccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCC
Q 045539 262 PNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNL 341 (897)
Q Consensus 262 ~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L 341 (897)
+.. +.++++|++|+|++|+++.+ | .+..+++|
T Consensus 178 ~~~---------------------~~~l~~L~~L~L~~n~l~~~--------------------------~-~~~~l~~L 209 (440)
T 3zyj_A 178 EGA---------------------FEGLSNLRYLNLAMCNLREI--------------------------P-NLTPLIKL 209 (440)
T ss_dssp TTT---------------------TTTCSSCCEEECTTSCCSSC--------------------------C-CCTTCSSC
T ss_pred cch---------------------hhcccccCeecCCCCcCccc--------------------------c-ccCCCccc
Confidence 211 34556666666666666522 1 14456677
Q ss_pred cEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccc
Q 045539 342 LVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLN 421 (897)
Q Consensus 342 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 421 (897)
++|+|++|+++++.|..|.++++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 210 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 289 (440)
T 3zyj_A 210 DELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289 (440)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSS
T ss_pred CEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCC
Confidence 77777777777766777777777777777777777666666777777777777777777666666677777777777777
Q ss_pred ccc
Q 045539 422 RFT 424 (897)
Q Consensus 422 ~l~ 424 (897)
.+.
T Consensus 290 p~~ 292 (440)
T 3zyj_A 290 PWN 292 (440)
T ss_dssp CEE
T ss_pred Ccc
Confidence 665
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6.4e-30 Score=277.91 Aligned_cols=256 Identities=18% Similarity=0.155 Sum_probs=131.2
Q ss_pred eecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccccccccccc
Q 045539 104 TLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNN 183 (897)
Q Consensus 104 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~ 183 (897)
.++++.+.+...++..+..+++|++|+|++|++.+..|..|.++++|++|+|++|++++..| ++.+++|++|+|++|+
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~ 91 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNY 91 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSE
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCc
Confidence 34444444443333333344455555555555555444555555555555555555543322 5555555555555555
Q ss_pred ccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccCc
Q 045539 184 LVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPN 263 (897)
Q Consensus 184 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 263 (897)
++++.+ .++|++|++++|++++..+. .+++|++|++++|++++..+..+..+++|++|+|++|.+++..+.
T Consensus 92 l~~l~~-----~~~L~~L~l~~n~l~~~~~~----~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 92 VQELLV-----GPSIETLHAANNNISRVSCS----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp EEEEEE-----CTTCCEEECCSSCCSEEEEC----CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred cccccC-----CCCcCEEECCCCccCCcCcc----ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 554422 25556666666655532221 235566666666666655555666666666666666666655444
Q ss_pred cccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcE
Q 045539 264 TFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLV 343 (897)
Q Consensus 264 ~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 343 (897)
.+ ...+++|++|+|++|++++..+ ...+++|++
T Consensus 163 ~~--------------------~~~l~~L~~L~L~~N~l~~~~~---------------------------~~~l~~L~~ 195 (317)
T 3o53_A 163 EL--------------------AASSDTLEHLNLQYNFIYDVKG---------------------------QVVFAKLKT 195 (317)
T ss_dssp GG--------------------GGGTTTCCEEECTTSCCCEEEC---------------------------CCCCTTCCE
T ss_pred HH--------------------hhccCcCCEEECCCCcCccccc---------------------------ccccccCCE
Confidence 32 1245566666666666653310 112445555
Q ss_pred EEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccc-cCCCcccccccccceeccc
Q 045539 344 LELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFS-GSIPSCLGNLTSLRVLYLG 419 (897)
Q Consensus 344 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~ 419 (897)
|+|++|++++ +|..|..+++|++|+|++|+++ .+|..+..+++|+.|++++|+++ +.+|..+..+++|+.|+++
T Consensus 196 L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 196 LDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp EECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred EECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 5555555554 2223555555555555555555 24444555555555555555555 4444555555555555555
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.4e-29 Score=271.28 Aligned_cols=161 Identities=20% Similarity=0.142 Sum_probs=104.3
Q ss_pred ccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhh-cccccccccccccccccCCCccccccccccee
Q 045539 338 LGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELC-HLARLHSLVLQGNKFSGSIPSCLGNLTSLRVL 416 (897)
Q Consensus 338 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 416 (897)
+++|++|++++|++++..+..|..+++|++|+|++|++++..+..+. .+++|++|+|++|+++
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~---------------- 182 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY---------------- 182 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC----------------
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc----------------
Confidence 34566666666666655555555555555555555555544444432 3444555555555444
Q ss_pred ccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcC
Q 045539 417 YLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLS 496 (897)
Q Consensus 417 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 496 (897)
+. |. ...+++|+ .|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..++
T Consensus 183 --------~~-~~-~~~l~~L~-------------~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 183 --------DV-KG-QVVFAKLK-------------TLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp --------EE-EC-CCCCTTCC-------------EEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred --------cc-cc-ccccccCC-------------EEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 32 11 11234444 33333333332 3444777888888999999998 5788899999
Q ss_pred CCcEEeccCCccC-CCCchhhhhhcccceEecc-CCcccccCCCC
Q 045539 497 SLEVLDLSKNKIS-GAIPASLQKLLYLKHLNLS-FNKLEGEIPRG 539 (897)
Q Consensus 497 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls-~N~l~~~~p~~ 539 (897)
+|+.|+|++|.++ +.+|..+..+++|+.|+++ .+.++|..|..
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred CCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 9999999999998 7889999999999999999 55677777754
No 318
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.1e-31 Score=318.84 Aligned_cols=415 Identities=14% Similarity=0.062 Sum_probs=289.5
Q ss_pred eEEEEEeecccc---cccCCCCCC------------CCCCCceecccCccccCcCCccccCC--CCCcEEeccCcc-ccC
Q 045539 77 RVIGLNISSFNL---QGTIPPQLG------------NLSSLQTLDLSHNKLSGNIPSSIFNM--HTLKLLYFSDNQ-LFG 138 (897)
Q Consensus 77 ~v~~l~l~~~~l---~g~~~~~l~------------~l~~L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~Ls~N~-l~~ 138 (897)
++..|+|+++.. .|.+|..++ .+++|++|+|++|.+++..+..++.+ .+|++|+|++|. +..
T Consensus 74 ~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~ 153 (592)
T 3ogk_B 74 NLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTT 153 (592)
T ss_dssp TCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEH
T ss_pred CCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCH
Confidence 477888876432 245565555 68899999999998887767777664 449999999886 211
Q ss_pred -CccccccccccccEEEeeecCCCCC----CCccccCcccccccccccccccc----ccccccccccccccccccccccc
Q 045539 139 -SLSFFIFNVSSVTTIDLSINGLSGE----MPREIGNLPYLARLAFATNNLVG----VAPVTIFNMSALKEIYLLNNSLS 209 (897)
Q Consensus 139 -~~~~~~~~l~~L~~LdLs~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~ 209 (897)
.++....++++|++|+|++|.+++. ++..+..+++|++|++++|.+++ ..+..+.++++|++|+|++|.+.
T Consensus 154 ~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~ 233 (592)
T 3ogk_B 154 DGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL 233 (592)
T ss_dssp HHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG
T ss_pred HHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH
Confidence 1233345788999999999988765 33445678899999999999873 33445667889999999999887
Q ss_pred ccCCccccccccccceeeccccccc---ccccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccc
Q 045539 210 GSLPSRIDLSLPNVETLNLGINSFY---GTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSL 286 (897)
Q Consensus 210 ~~~p~~~~~~l~~L~~L~L~~N~l~---~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l 286 (897)
+ +|.. +..+++|+.|+++.+... +..+..+..+++|+.|+++++... .+|. .+
T Consensus 234 ~-l~~~-~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~---------------------~~ 289 (592)
T 3ogk_B 234 E-LVGF-FKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPI---------------------LF 289 (592)
T ss_dssp G-GHHH-HHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGG---------------------GG
T ss_pred H-HHHH-HhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHH---------------------HH
Confidence 4 5533 447789999998864332 344567778888888888875322 2222 13
Q ss_pred cccCCCcEEEecCCCCCCCCCC-cccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccC-----------CCCCCC
Q 045539 287 TNCKKLKVLILTGNPLDGILPK-SKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGG-----------NNLTEP 354 (897)
Q Consensus 287 ~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~-----------N~l~~~ 354 (897)
..+++|++|+|++|.+++.... .+..++ +|+.|++.++...+.++..+..+++|++|++++ |.+++.
T Consensus 290 ~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~-~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~ 368 (592)
T 3ogk_B 290 PFAAQIRKLDLLYALLETEDHCTLIQKCP-NLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR 368 (592)
T ss_dssp GGGGGCCEEEETTCCCCHHHHHHHHTTCT-TCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH
T ss_pred hhcCCCcEEecCCCcCCHHHHHHHHHhCc-CCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH
Confidence 5677888888888886543321 123343 677777774333334455557789999999993 677653
Q ss_pred cc-ccccCccchhhhcccCcccccccchhhhc-cccccccccc----ccccccC-----CCcccccccccceecccccc-
Q 045539 355 IP-ITFSQLQTLQALGLTRNKLAGPITDELCH-LARLHSLVLQ----GNKFSGS-----IPSCLGNLTSLRVLYLGLNR- 422 (897)
Q Consensus 355 ~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~L~~N~- 422 (897)
.. ..+..+++|++|+++.|++++..+..+.. +++|+.|+++ .|++++. ++..+.++++|+.|++++|.
T Consensus 369 ~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~ 448 (592)
T 3ogk_B 369 GLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQG 448 (592)
T ss_dssp HHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGG
T ss_pred HHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCC
Confidence 22 23456899999999999999888888776 8999999996 7788853 33346779999999998543
Q ss_pred -ccCCccccccc-cccceEEeecCCcccccceeecccCcCCC-CCcccccCCcccccccccCceeccc-CCCCCCCcCCC
Q 045539 423 -FTSALPSTIWN-LKDILFIDVSSNSLNVLIGLNFSRNNLSG-DIPITIGGLKNLQQMFLEYNRLEGS-IPESFGDLSSL 498 (897)
Q Consensus 423 -l~~~~p~~~~~-l~~L~~L~ls~N~l~~l~~l~ls~n~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L 498 (897)
+++..+..+.. +++|++|++ ++|++++ .++..+..+++|++|++++|.+++. ++..+..+++|
T Consensus 449 ~l~~~~~~~~~~~~~~L~~L~L-------------~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L 515 (592)
T 3ogk_B 449 GLTDLGLSYIGQYSPNVRWMLL-------------GYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSL 515 (592)
T ss_dssp GCCHHHHHHHHHSCTTCCEEEE-------------CSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSC
T ss_pred CccHHHHHHHHHhCccceEeec-------------cCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCcc
Confidence 66655555543 667775554 5555554 3455567889999999999998754 44445678999
Q ss_pred cEEeccCCccCCCCchhh-hhhcccceEeccC
Q 045539 499 EVLDLSKNKISGAIPASL-QKLLYLKHLNLSF 529 (897)
Q Consensus 499 ~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~ 529 (897)
++|+|++|++++.-...+ ..++.+....+..
T Consensus 516 ~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 516 RYLWVQGYRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp CEEEEESCBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred CeeECcCCcCCHHHHHHHHHhCCCcEEEEecC
Confidence 999999999986533333 3456665554443
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.1e-27 Score=280.81 Aligned_cols=149 Identities=29% Similarity=0.340 Sum_probs=94.8
Q ss_pred cCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceecc
Q 045539 339 GNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYL 418 (897)
Q Consensus 339 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 418 (897)
++|+.|++++|++++ +| ..+++|+.|+|++|++++ +|.. +++|+.|++++|+++ .+|.. +++|+.|++
T Consensus 161 ~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~L 228 (622)
T 3g06_A 161 SELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIV 228 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEEC
T ss_pred CCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEc
Confidence 345666666666665 33 334556666666666653 2321 356666777777776 44432 356777777
Q ss_pred ccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCC
Q 045539 419 GLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSL 498 (897)
Q Consensus 419 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 498 (897)
++|++++ +| ..+++|+. |+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|.++++|
T Consensus 229 s~N~L~~-lp---~~l~~L~~-------------L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L 286 (622)
T 3g06_A 229 SGNRLTS-LP---VLPSELKE-------------LMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSE 286 (622)
T ss_dssp CSSCCSC-CC---CCCTTCCE-------------EECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTT
T ss_pred cCCccCc-CC---CCCCcCcE-------------EECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhcccc
Confidence 7777775 44 23345553 344444444 2344 4577888888888888 678888888888
Q ss_pred cEEeccCCccCCCCchhhhhhcc
Q 045539 499 EVLDLSKNKISGAIPASLQKLLY 521 (897)
Q Consensus 499 ~~L~Ls~N~l~~~~p~~~~~l~~ 521 (897)
+.|+|++|.+++.+|..+..++.
T Consensus 287 ~~L~L~~N~l~~~~~~~l~~L~~ 309 (622)
T 3g06_A 287 TTVNLEGNPLSERTLQALREITS 309 (622)
T ss_dssp CEEECCSCCCCHHHHHHHHHHHH
T ss_pred CEEEecCCCCCCcCHHHHHhccc
Confidence 88888888888888887777653
No 320
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=2.5e-29 Score=293.05 Aligned_cols=186 Identities=17% Similarity=0.119 Sum_probs=132.6
Q ss_pred eeecccceEEEEEEe-cCCceEEEEEechh----------hHHHHHHHHHHHHHHHhc-CCCccceEeeeecCCCceEEE
Q 045539 624 LIGIGSFGSIYVARL-QDGMEVAVKVFHQQ----------YERALKSFEDECEVMKRI-RHRNLVKIISSCSNDDFKALI 691 (897)
Q Consensus 624 ~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 691 (897)
..+.|++|.+..++. -.|+.||+|++.+. .....+.|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 345666666666542 35899999998643 233457799999999999 599999999999999999999
Q ss_pred EEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCC
Q 045539 692 MKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 771 (897)
Q Consensus 692 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~ 771 (897)
|||++|++|.+++...+ +++.. +|+.||+.||+|+ |++|||||||||+|||++++|.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~yl---H~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAAL---EKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHH---HHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHH---HHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999998765 46654 5889999999999 89999999999999999999999999999998764332
Q ss_pred ceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCC
Q 045539 772 QLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPT 819 (897)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~ 819 (897)
......+||+.|+|||++.+ .+..++|+||+|++.+++.++..|+
T Consensus 394 --~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 394 --SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred --ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 22345679999999998765 5677899999999998887765554
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=2.2e-27 Score=251.70 Aligned_cols=220 Identities=25% Similarity=0.314 Sum_probs=197.2
Q ss_pred CCCcceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCc
Q 045539 61 TSVCSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSL 140 (897)
Q Consensus 61 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 140 (897)
.++|.|.|+.|+.. +.+..+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++....
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 46899999999754 24567999999998 5787665 68999999999999777779999999999999999999888
Q ss_pred cccccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccc
Q 045539 141 SFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSL 220 (897)
Q Consensus 141 ~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l 220 (897)
+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+++++.+..|.++++|++|+|++|+++ .+|...+..+
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l 156 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKL 156 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTC
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC-ccCHhHccCC
Confidence 888999999999999999999777778899999999999999999999999999999999999999998 6777777789
Q ss_pred cccceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCC
Q 045539 221 PNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGN 300 (897)
Q Consensus 221 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N 300 (897)
++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+.. +..+++|+.|+|++|
T Consensus 157 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---------------------~~~l~~L~~L~l~~N 215 (270)
T 2o6q_A 157 TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGA---------------------FDSLEKLKMLQLQEN 215 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTT---------------------TTTCTTCCEEECCSS
T ss_pred cccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHH---------------------hccccCCCEEEecCC
Confidence 99999999999999888888999999999999999999776654 356789999999999
Q ss_pred CCCCCC
Q 045539 301 PLDGIL 306 (897)
Q Consensus 301 ~l~~~~ 306 (897)
++....
T Consensus 216 ~~~c~c 221 (270)
T 2o6q_A 216 PWDCTC 221 (270)
T ss_dssp CBCCSS
T ss_pred CeeCCC
Confidence 987543
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-27 Score=274.79 Aligned_cols=238 Identities=21% Similarity=0.210 Sum_probs=134.0
Q ss_pred CCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccccc
Q 045539 98 NLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARL 177 (897)
Q Consensus 98 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L 177 (897)
..++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+| +..+++|++|||++|.|+
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~---------------- 93 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ---------------- 93 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEE----------------
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCC----------------
Confidence 33466666666666665555666666666666666666654443 555555555555555554
Q ss_pred ccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEcccccc
Q 045539 178 AFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLF 257 (897)
Q Consensus 178 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 257 (897)
++.+ .++|++|++++|.+++..+. .+++|++|+|++|.+++..|..++++++|+.|+|++|.+
T Consensus 94 --------~l~~-----~~~L~~L~L~~N~l~~~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 156 (487)
T 3oja_A 94 --------ELLV-----GPSIETLHAANNNISRVSCS----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI 156 (487)
T ss_dssp --------EEEE-----CTTCCEEECCSSCCCCEEEC----CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCC
T ss_pred --------CCCC-----CCCcCEEECcCCcCCCCCcc----ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCC
Confidence 3322 14455555555555432221 234556666666666655566666666666666666666
Q ss_pred ccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccC
Q 045539 258 SGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGN 337 (897)
Q Consensus 258 ~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~ 337 (897)
++.+|..| ...+++|++|+|++|.+++..+ +..
T Consensus 157 ~~~~~~~l--------------------~~~l~~L~~L~Ls~N~l~~~~~---------------------------~~~ 189 (487)
T 3oja_A 157 DTVNFAEL--------------------AASSDTLEHLNLQYNFIYDVKG---------------------------QVV 189 (487)
T ss_dssp CEEEGGGG--------------------GGGTTTCCEEECTTSCCCEEEC---------------------------CCC
T ss_pred CCcChHHH--------------------hhhCCcccEEecCCCccccccc---------------------------ccc
Confidence 66555433 1245666666666666654311 123
Q ss_pred ccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccc-cCCCccccccccccee
Q 045539 338 LGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFS-GSIPSCLGNLTSLRVL 416 (897)
Q Consensus 338 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L 416 (897)
+++|++|+|++|+|+++ |..|..+++|+.|+|++|++++ +|..+..+++|+.|++++|.+. +.+|..+..++.|+.+
T Consensus 190 l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l 267 (487)
T 3oja_A 190 FAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTV 267 (487)
T ss_dssp CTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHH
T ss_pred CCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEE
Confidence 45566666666666653 3335566666666666666663 4555566666666666666665 4555556666666666
Q ss_pred ccc
Q 045539 417 YLG 419 (897)
Q Consensus 417 ~L~ 419 (897)
+++
T Consensus 268 ~~~ 270 (487)
T 3oja_A 268 AKQ 270 (487)
T ss_dssp HHH
T ss_pred ecc
Confidence 664
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=1.4e-30 Score=309.27 Aligned_cols=187 Identities=15% Similarity=0.150 Sum_probs=123.6
Q ss_pred CcceeeeEeeCCCCeEEEEEeecccccccCC-CCCCCCCCCceecccCccccC---cCCc------------cccCCCCC
Q 045539 63 VCSWIGITCDVNSHRVIGLNISSFNLQGTIP-PQLGNLSSLQTLDLSHNKLSG---NIPS------------SIFNMHTL 126 (897)
Q Consensus 63 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~-~~l~~l~~L~~L~Ls~n~l~~---~~p~------------~~~~l~~L 126 (897)
|++|.++.. .....+++.... +..| ..+..+++|++|+|+++.... ..|. ....+++|
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhh----hhceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 557888822 123345554332 1222 235567889999998875321 2221 23467889
Q ss_pred cEEeccCccccCCcccccc-ccccccEEEeeec-CCCCC-CCccccCccccccccccccccccccccccc----cccccc
Q 045539 127 KLLYFSDNQLFGSLSFFIF-NVSSVTTIDLSIN-GLSGE-MPREIGNLPYLARLAFATNNLVGVAPVTIF----NMSALK 199 (897)
Q Consensus 127 ~~L~Ls~N~l~~~~~~~~~-~l~~L~~LdLs~N-~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~----~l~~L~ 199 (897)
++|+|++|.+.+..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 9999999988877766665 6889999999988 55432 344455788999999999988876555444 566899
Q ss_pred cccccccc--ccccCCccccccccccceeecccccccccccccccCCCcccEEEcccc
Q 045539 200 EIYLLNNS--LSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVN 255 (897)
Q Consensus 200 ~L~L~~N~--l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 255 (897)
+|++++|. ++......+...+++|++|+|++|...+.++..+.++++|+.|+++.+
T Consensus 188 ~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 188 SLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp EEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBC
T ss_pred EEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccc
Confidence 99999886 221111222234688999999888333347788888889999986554
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.7e-25 Score=238.09 Aligned_cols=208 Identities=20% Similarity=0.214 Sum_probs=165.5
Q ss_pred HHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhccccccccccc
Q 045539 316 SLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQ 395 (897)
Q Consensus 316 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 395 (897)
++++|++++|++++..+..|.++++|++|++++|+++++.+..|.++++|++|+|++|++++..+..|..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 44555555555555556677888899999999999988777788899999999999999988888888899999999999
Q ss_pred ccccccCCCcccccccccceeccccccccCC-ccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCccc
Q 045539 396 GNKFSGSIPSCLGNLTSLRVLYLGLNRFTSA-LPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNL 474 (897)
Q Consensus 396 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L 474 (897)
+|++++..+..++++++|++|++++|++++. +|..+.++++|++|+ +++|++++..+..+..+++|
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~-------------Ls~N~l~~~~~~~~~~l~~L 175 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD-------------LSSNKIQSIYCTDLRVLHQM 175 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE-------------CCSSCCCEECGGGGHHHHTC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEE-------------CCCCCCCcCCHHHhhhhhhc
Confidence 9999877776788999999999999998864 588888888888444 44455555556677777777
Q ss_pred c----cccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcccccCC
Q 045539 475 Q----QMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIP 537 (897)
Q Consensus 475 ~----~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 537 (897)
+ .|++++|++++..+..+. ..+|+.|+|++|+|++..+..+..+++|+.|+|++|++++..|
T Consensus 176 ~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 176 PLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp TTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 7 788999999865555554 4589999999999997666677889999999999999987554
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=7.5e-29 Score=294.48 Aligned_cols=382 Identities=13% Similarity=0.145 Sum_probs=228.1
Q ss_pred eEEEEEeecccccc---cCCCC------------CCCCCCCceecccCccccCcCCcccc-CCCCCcEEeccCc-cccCC
Q 045539 77 RVIGLNISSFNLQG---TIPPQ------------LGNLSSLQTLDLSHNKLSGNIPSSIF-NMHTLKLLYFSDN-QLFGS 139 (897)
Q Consensus 77 ~v~~l~l~~~~l~g---~~~~~------------l~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~ 139 (897)
++..|+++++.... ..|.. ...+++|++|+|++|.+++..+..+. ++++|++|+|++| .+...
T Consensus 67 ~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~ 146 (594)
T 2p1m_B 67 KVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTD 146 (594)
T ss_dssp TCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHH
T ss_pred CceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHH
Confidence 47788888765322 22222 23578999999999999877777776 7899999999999 55433
Q ss_pred -ccccccccccccEEEeeecCCCCCCCcccc----Cccccccccccccc--cccc-ccccccccccccccccccc-cccc
Q 045539 140 -LSFFIFNVSSVTTIDLSINGLSGEMPREIG----NLPYLARLAFATNN--LVGV-APVTIFNMSALKEIYLLNN-SLSG 210 (897)
Q Consensus 140 -~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~----~l~~L~~L~L~~N~--l~~~-~~~~~~~l~~L~~L~L~~N-~l~~ 210 (897)
++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. +... .+..+.++++|++|+|++| .++
T Consensus 147 ~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~- 225 (594)
T 2p1m_B 147 GLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE- 225 (594)
T ss_dssp HHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-
T ss_pred HHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-
Confidence 455566899999999999998876655444 67799999999997 3211 1222345799999999998 444
Q ss_pred cCCccccccccccceeeccc-------ccccccccccccCCCcccEE-EccccccccccCccccccccccccCCCCcccc
Q 045539 211 SLPSRIDLSLPNVETLNLGI-------NSFYGTVPSSITNASKLSDL-ELGVNLFSGFIPNTFVNMADNYLTSSTPELSF 282 (897)
Q Consensus 211 ~~p~~~~~~l~~L~~L~L~~-------N~l~~~~p~~l~~l~~L~~L-~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~ 282 (897)
.+|..+ ..+++|+.|+++. |.+.+ ++..+.++++|+.| .+...... .++.
T Consensus 226 ~l~~~~-~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~-~l~~------------------- 283 (594)
T 2p1m_B 226 KLATLL-QRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVPA-YLPA------------------- 283 (594)
T ss_dssp HHHHHH-HHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCGG-GGGG-------------------
T ss_pred HHHHHH-hcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccchh-hHHH-------------------
Confidence 354443 3688999999544 44544 44577888999988 33322211 1111
Q ss_pred cccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCC-ccccccC
Q 045539 283 LSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEP-IPITFSQ 361 (897)
Q Consensus 283 l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~ 361 (897)
.+..+++|++|+|++|.+++.. ++..+..+++|++|++++| ++.. ++.....
T Consensus 284 --~~~~~~~L~~L~L~~~~l~~~~------------------------l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~ 336 (594)
T 2p1m_B 284 --VYSVCSRLTTLNLSYATVQSYD------------------------LVKLLCQCPKLQRLWVLDY-IEDAGLEVLAST 336 (594)
T ss_dssp --GHHHHTTCCEEECTTCCCCHHH------------------------HHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHH
T ss_pred --HHHhhCCCCEEEccCCCCCHHH------------------------HHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHh
Confidence 1346788999999999865321 1122345667777777776 3321 1222234
Q ss_pred ccchhhhcc---------cCcccccccchhhh-cccccccccccccccccCCCcccc-cccccceeccc--c----cccc
Q 045539 362 LQTLQALGL---------TRNKLAGPITDELC-HLARLHSLVLQGNKFSGSIPSCLG-NLTSLRVLYLG--L----NRFT 424 (897)
Q Consensus 362 l~~L~~L~L---------s~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~ 424 (897)
+++|++|++ +.|.+++.....+. .+++|++|+++.|++++..+..+. .+++|+.|+++ + |.++
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~ 416 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT 416 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc
Confidence 666777766 33455543333333 367777777777777655554454 46777777777 3 4454
Q ss_pred CC-----ccccccccccceEEeecCCc-----------ccccceeecccCcCCCCCcccc-cCCcccccccccCceeccc
Q 045539 425 SA-----LPSTIWNLKDILFIDVSSNS-----------LNVLIGLNFSRNNLSGDIPITI-GGLKNLQQMFLEYNRLEGS 487 (897)
Q Consensus 425 ~~-----~p~~~~~l~~L~~L~ls~N~-----------l~~l~~l~ls~n~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~ 487 (897)
+. ++..+..+++|+.|+++++- ++.|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++.
T Consensus 417 ~~~~~~~~~~l~~~~~~L~~L~L~~~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 417 LEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp CCCTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred CCchhhHHHHHHhhCCCccEEeecCcccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 21 12224556666655554410 1223344444444433333332 3345555555555555332
Q ss_pred CCC-CCCCcCCCcEEeccCCcc
Q 045539 488 IPE-SFGDLSSLEVLDLSKNKI 508 (897)
Q Consensus 488 ~p~-~~~~l~~L~~L~Ls~N~l 508 (897)
.+. .+..+++|+.|++++|++
T Consensus 497 ~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 497 ALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHHhCCCCCEEeeeCCCC
Confidence 221 223345555555555554
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=7.2e-25 Score=233.18 Aligned_cols=220 Identities=20% Similarity=0.233 Sum_probs=126.1
Q ss_pred eecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccc
Q 045539 156 SINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYG 235 (897)
Q Consensus 156 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~ 235 (897)
++..+. .+|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|+++ .++...+..+++|++|+|++|.+++
T Consensus 15 ~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (276)
T 2z62_A 15 MELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQS 90 (276)
T ss_dssp TTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCE
T ss_pred cCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCC-ccCHHHccCCcCCCEEECCCCccCc
Confidence 333443 4444433 34555666666665555555556666666666666655 3333333355555555555565555
Q ss_pred cccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchH
Q 045539 236 TVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSL 315 (897)
Q Consensus 236 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 315 (897)
..+..|.++++|++|++++|.+++..+.. +.++++|++|++++|++++.
T Consensus 91 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------------------~~~l~~L~~L~l~~n~l~~~---------- 139 (276)
T 2z62_A 91 LALGAFSGLSSLQKLVAVETNLASLENFP---------------------IGHLKTLKELNVAHNLIQSF---------- 139 (276)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCC---------------------CTTCTTCCEEECCSSCCCCC----------
T ss_pred cChhhhcCCccccEEECCCCCccccCchh---------------------cccCCCCCEEECcCCcccee----------
Confidence 55556666666666666666665544422 34556666666666665532
Q ss_pred HHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchh----hhcccCcccccccchhhhccccccc
Q 045539 316 SLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQ----ALGLTRNKLAGPITDELCHLARLHS 391 (897)
Q Consensus 316 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~ 391 (897)
.+|..++.+++|++|++++|++++..+..|..+++|+ .|++++|++++..+..+. ..+|++
T Consensus 140 --------------~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~ 204 (276)
T 2z62_A 140 --------------KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKE 204 (276)
T ss_dssp --------------CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEE
T ss_pred --------------cCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccE
Confidence 1344556666777777777777666566666666655 556666666644443333 235666
Q ss_pred ccccccccccCCCcccccccccceeccccccccC
Q 045539 392 LVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTS 425 (897)
Q Consensus 392 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 425 (897)
|+|++|++++..+..+.++++|+.|++++|++++
T Consensus 205 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 205 LALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp EECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred EECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 6666666665444555666666666666666664
No 327
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=6.3e-25 Score=230.01 Aligned_cols=193 Identities=22% Similarity=0.245 Sum_probs=175.9
Q ss_pred CCcceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCcc
Q 045539 62 SVCSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLS 141 (897)
Q Consensus 62 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 141 (897)
+||.|.|++|... ...+++++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++.+..+
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 5899999999643 235789999998 6787765 699999999999999888899999999999999999999999
Q ss_pred ccccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCcccccccc
Q 045539 142 FFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLP 221 (897)
Q Consensus 142 ~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~ 221 (897)
..|.++++|++|+|++|++++..+..|+.+++|++|+|++|+++++.+..|.++++|++|+|++|+++ .+|...+..++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~ 155 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLT 155 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC-ccCHHHcCcCc
Confidence 99999999999999999999777788999999999999999999999888999999999999999999 66766666899
Q ss_pred ccceeecccccccccccccccCCCcccEEEcccccccccc
Q 045539 222 NVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFI 261 (897)
Q Consensus 222 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 261 (897)
+|++|+|++|++++..+..+..+++|+.|+|++|.+++..
T Consensus 156 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred CCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 9999999999999888889999999999999999998653
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.6e-25 Score=235.86 Aligned_cols=159 Identities=26% Similarity=0.266 Sum_probs=78.0
Q ss_pred cCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceE
Q 045539 360 SQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILF 439 (897)
Q Consensus 360 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 439 (897)
..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|+++++|++|++++|++++..+..+..+++|+
T Consensus 82 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~- 160 (272)
T 3rfs_A 82 KELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLT- 160 (272)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-
T ss_pred cCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCC-
Confidence 3333333333333333333333333444444444444444433333344444444444444444443333344444444
Q ss_pred EeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhh
Q 045539 440 IDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKL 519 (897)
Q Consensus 440 L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 519 (897)
.|++++|++++..|..++.+++|++|++++|++++..|..|..+++|+.|+|++|.+++..|
T Consensus 161 ------------~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~------ 222 (272)
T 3rfs_A 161 ------------ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP------ 222 (272)
T ss_dssp ------------EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT------
T ss_pred ------------EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc------
Confidence 22333333333334445556666666666666666555556666666666666666654432
Q ss_pred cccceEeccCCcccccCCC
Q 045539 520 LYLKHLNLSFNKLEGEIPR 538 (897)
Q Consensus 520 ~~L~~L~ls~N~l~~~~p~ 538 (897)
+|+.|+++.|+++|.+|.
T Consensus 223 -~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 223 -GIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp -TTHHHHHHHHHTGGGBBC
T ss_pred -HHHHHHHHHHhCCCcccC
Confidence 455666666666666664
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=4.1e-24 Score=226.46 Aligned_cols=205 Identities=23% Similarity=0.276 Sum_probs=162.0
Q ss_pred CCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhc
Q 045539 290 KKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALG 369 (897)
Q Consensus 290 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 369 (897)
.+.+.+++++|+++.+ |. .+. ++|++|+|++|+++++.+..|.++++|++|+
T Consensus 16 ~~~~~l~~~~~~l~~i-p~-------------------------~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 67 (270)
T 2o6q_A 16 NNKNSVDCSSKKLTAI-PS-------------------------NIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLY 67 (270)
T ss_dssp TTTTEEECTTSCCSSC-CS-------------------------CCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEE
T ss_pred CCCCEEEccCCCCCcc-CC-------------------------CCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEE
Confidence 3578899999888743 32 121 4678888888888887777888888888888
Q ss_pred ccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccc
Q 045539 370 LTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNV 449 (897)
Q Consensus 370 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 449 (897)
|++|+++...+..|..+++|++|+|++|++++..+..|.++++|++|++++|++++..+..|..+++|++|
T Consensus 68 l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L--------- 138 (270)
T 2o6q_A 68 LNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYL--------- 138 (270)
T ss_dssp CCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEE---------
T ss_pred CCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEE---------
Confidence 88888886666667788888888888888887666777888888888888888888777777888877744
Q ss_pred cceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccC
Q 045539 450 LIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSF 529 (897)
Q Consensus 450 l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 529 (897)
+|++|++++..+..++.+++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++
T Consensus 139 ----~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 214 (270)
T 2o6q_A 139 ----SLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQE 214 (270)
T ss_dssp ----ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred ----ECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecC
Confidence 4445555555556688889999999999999977777788999999999999999976666788899999999999
Q ss_pred Cccccc
Q 045539 530 NKLEGE 535 (897)
Q Consensus 530 N~l~~~ 535 (897)
|++.+.
T Consensus 215 N~~~c~ 220 (270)
T 2o6q_A 215 NPWDCT 220 (270)
T ss_dssp SCBCCS
T ss_pred CCeeCC
Confidence 988654
No 330
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=2.1e-25 Score=258.46 Aligned_cols=188 Identities=19% Similarity=0.192 Sum_probs=145.4
Q ss_pred CCCcCCeeecccceEEEEEEecCCceEEEEEechhh--------HHHHHHHHHHHHHHHhcCCCccceEeeeecCCCceE
Q 045539 618 RFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQY--------ERALKSFEDECEVMKRIRHRNLVKIISSCSNDDFKA 689 (897)
Q Consensus 618 ~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 689 (897)
.+...+.||+|+||.||+|+.. ++.+++|+..... ....+++.+|++++++++||||+++..++...+..|
T Consensus 337 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 337 RKIPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp -----------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTE
T ss_pred cCCCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccE
Confidence 3345679999999999999554 7889999864221 123466899999999999999996666665677789
Q ss_pred EEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCC
Q 045539 690 LIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 769 (897)
Q Consensus 690 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~ 769 (897)
+||||+++++|.+++.. +..++.|+++||+|| |++||+||||||+||+++. .+||+|||+|+....
T Consensus 416 lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~L---H~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKL---HKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHH---HHTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHH---HHCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999999876 557999999999999 8899999999999999998 999999999998754
Q ss_pred CCcee-----eeeccccCcccCCcCccCC--CCCCccchHHHHHHHHHHHHcCCCCCc
Q 045539 770 EDQLS-----IQIQTLATIGYMAPEYGTK--GRVCTRGDVYSYGIMLMEMFTKKKPTD 820 (897)
Q Consensus 770 ~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~slGvil~elltg~~p~~ 820 (897)
..... ......||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 32211 1134579999999999876 567888999999999999888877764
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=3e-24 Score=229.47 Aligned_cols=203 Identities=23% Similarity=0.220 Sum_probs=142.4
Q ss_pred ccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccch
Q 045539 286 LTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTL 365 (897)
Q Consensus 286 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 365 (897)
+.++++++++++++|.++.+ | ..+. ++++.|+|++|++++..+..|.++++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~~i-p-------------------------~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L 57 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTAL-P-------------------------PDLP--KDTTILHLSENLLYTFSLATLMPYTRL 57 (290)
T ss_dssp EECSTTCCEEECTTSCCSSC-C-------------------------SCCC--TTCCEEECTTSCCSEEEGGGGTTCTTC
T ss_pred ccccCCccEEECCCCCCCcC-C-------------------------CCCC--CCCCEEEcCCCcCCccCHHHhhcCCCC
Confidence 56677888888888887743 2 1111 467777777777777667777777777
Q ss_pred hhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCC
Q 045539 366 QALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSN 445 (897)
Q Consensus 366 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 445 (897)
++|+|++|++++..+. ..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..|..|.++++|+
T Consensus 58 ~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~------- 127 (290)
T 1p9a_G 58 TQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ------- 127 (290)
T ss_dssp CEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCC-------
T ss_pred CEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCC-------
Confidence 7777777777753332 56777777777777777 6677777777777777777777766666677777766
Q ss_pred cccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceE
Q 045539 446 SLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHL 525 (897)
Q Consensus 446 ~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 525 (897)
.|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|
T Consensus 128 ------~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l 200 (290)
T 1p9a_G 128 ------ELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFA 200 (290)
T ss_dssp ------EEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEE
T ss_pred ------EEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeE
Confidence 3444444455455566677777777777777777555556677777888888888777 677777777777777
Q ss_pred eccCCccc
Q 045539 526 NLSFNKLE 533 (897)
Q Consensus 526 ~ls~N~l~ 533 (897)
+|++|++.
T Consensus 201 ~L~~Np~~ 208 (290)
T 1p9a_G 201 FLHGNPWL 208 (290)
T ss_dssp ECCSCCBC
T ss_pred EeCCCCcc
Confidence 77777764
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=3.8e-24 Score=226.92 Aligned_cols=211 Identities=19% Similarity=0.247 Sum_probs=165.7
Q ss_pred CCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccc
Q 045539 96 LGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLA 175 (897)
Q Consensus 96 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~ 175 (897)
+..+++|+.|++++|.++ .++ .++.+++|++|+|++|++.+. ..+..+++|++|+|++|.+++..|..|+++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 456778888888888887 333 578888888888888888763 3677888888888888888876667778888888
Q ss_pred ccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEcccc
Q 045539 176 RLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVN 255 (897)
Q Consensus 176 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 255 (897)
+|+|++|+++++.+..|.++++|++|+|++|+++ .+|...+..+++|++|+|++|++++..+..+..+++|++|++++|
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccC-ccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 8888888888887777888888888888888887 566665567888888888888888777777888899999999999
Q ss_pred ccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccc
Q 045539 256 LFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVV 335 (897)
Q Consensus 256 ~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~ 335 (897)
.+++..+.. +..+++|++|++++|++.+..| .++.+.+..|.++|.+|..+
T Consensus 192 ~l~~~~~~~---------------------~~~l~~L~~L~l~~N~~~~~~~--------~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 192 QLKSVPDGV---------------------FDRLTSLQYIWLHDNPWDCTCP--------GIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp CCSCCCTTT---------------------TTTCTTCCEEECCSSCBCCCTT--------TTHHHHHHHHHTGGGBBCTT
T ss_pred cCCccCHHH---------------------HhCCcCCCEEEccCCCccccCc--------HHHHHHHHHHhCCCcccCcc
Confidence 888776654 3567889999999998876544 46677777777777777766
Q ss_pred cCccC
Q 045539 336 GNLGN 340 (897)
Q Consensus 336 ~~l~~ 340 (897)
+.+..
T Consensus 243 ~~~~~ 247 (272)
T 3rfs_A 243 GSVAP 247 (272)
T ss_dssp SCBCG
T ss_pred cccCC
Confidence 65544
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=5.3e-24 Score=221.27 Aligned_cols=198 Identities=14% Similarity=0.126 Sum_probs=178.7
Q ss_pred CeEEEEEeecccccccCCCCCCCCCCCceecccCcc-ccCcCCccccCCCCCcEEeccC-ccccCCccccccccccccEE
Q 045539 76 HRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNK-LSGNIPSSIFNMHTLKLLYFSD-NQLFGSLSFFIFNVSSVTTI 153 (897)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L 153 (897)
..+..|++++|++++..+.+++++++|++|+|++|+ +++..+..|.++++|++|+|++ |++.+..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 468999999999998777799999999999999997 8866677899999999999999 99998888999999999999
Q ss_pred EeeecCCCCCCCccccCccccc---ccccccc-ccccccccccccccccc-ccccccccccccCCccccccccccceeec
Q 045539 154 DLSINGLSGEMPREIGNLPYLA---RLAFATN-NLVGVAPVTIFNMSALK-EIYLLNNSLSGSLPSRIDLSLPNVETLNL 228 (897)
Q Consensus 154 dLs~N~l~~~~p~~l~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~~l~~L~~L~L 228 (897)
+|++|++++ +|. |+.+++|+ +|++++| +++++.+..|.++++|+ +|++++|+++ .+|...+.. ++|+.|+|
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~L 186 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG-TKLDAVYL 186 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT-CEEEEEEC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC-CCCCEEEc
Confidence 999999995 777 88999998 9999999 99999999999999999 9999999999 889888755 89999999
Q ss_pred cccc-ccccccccccCC-CcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCC
Q 045539 229 GINS-FYGTVPSSITNA-SKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNP 301 (897)
Q Consensus 229 ~~N~-l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~ 301 (897)
++|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++.
T Consensus 187 ~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~------------------------~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK------------------------GLEHLKELIARNTW 237 (239)
T ss_dssp TTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT------------------------TCTTCSEEECTTC-
T ss_pred CCCCCcccCCHHHhhccccCCcEEECCCCccccCChh------------------------HhccCceeeccCcc
Confidence 9995 987778889999 9999999999999876553 35788899988763
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=3.4e-26 Score=253.39 Aligned_cols=130 Identities=19% Similarity=0.139 Sum_probs=84.4
Q ss_pred EEeecccccccCCCCCCCCCCCceecccCccccCcCC----ccccCCC-CCcEEeccCccccCCcccccccc-----ccc
Q 045539 81 LNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIP----SSIFNMH-TLKLLYFSDNQLFGSLSFFIFNV-----SSV 150 (897)
Q Consensus 81 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l-----~~L 150 (897)
.+++.++++|.+|..+...++|++|||++|.+++..+ ..|.+++ +|++|+|++|++.+..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566777777777666666667777777777775555 5666676 67777777777776666666664 677
Q ss_pred cEEEeeecCCCCCCCccccC----c-ccccccccccccccccccccccc-----cccccccccccccccc
Q 045539 151 TTIDLSINGLSGEMPREIGN----L-PYLARLAFATNNLVGVAPVTIFN-----MSALKEIYLLNNSLSG 210 (897)
Q Consensus 151 ~~LdLs~N~l~~~~p~~l~~----l-~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~ 210 (897)
++|||++|++++..+..++. + ++|++|+|++|++++..+..+.. .++|++|+|++|++++
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 77777777776655554333 2 66666777777666665544433 2466666666666653
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.6e-25 Score=247.99 Aligned_cols=270 Identities=17% Similarity=0.122 Sum_probs=173.8
Q ss_pred eecccCccccCcCCccccCCCCCcEEeccCccccCCcc----ccccccc-cccEEEeeecCCCCCCCccccCc-----cc
Q 045539 104 TLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLS----FFIFNVS-SVTTIDLSINGLSGEMPREIGNL-----PY 173 (897)
Q Consensus 104 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~-~L~~LdLs~N~l~~~~p~~l~~l-----~~ 173 (897)
.++|++|+++|.+|..+...++|++|+|++|++.+..+ ..+.+++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46889999999999888888889999999999988877 7778888 89999999999998777777776 88
Q ss_pred cccccccccccccccccccccc-----ccccccccccccccccCCccccc---c-ccccceeecccccccccc----ccc
Q 045539 174 LARLAFATNNLVGVAPVTIFNM-----SALKEIYLLNNSLSGSLPSRIDL---S-LPNVETLNLGINSFYGTV----PSS 240 (897)
Q Consensus 174 L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~---~-l~~L~~L~L~~N~l~~~~----p~~ 240 (897)
|++|+|++|++++..+..+... ++|++|+|++|++++..+..+.. . .++|++|+|++|.+++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999988877755544 78888888888887544333221 1 247777777777776433 333
Q ss_pred ccCCC-cccEEEccccccccccCccccccccccccCCCCccccccccccc-CCCcEEEecCCCCCCCCCCcccCchHHHH
Q 045539 241 ITNAS-KLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNC-KKLKVLILTGNPLDGILPKSKGNLSLSLE 318 (897)
Q Consensus 241 l~~l~-~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~ 318 (897)
+..++ +|++|+|++|.+++..+..+.. .+..+ ++|++|+|++|++++....
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~-----------------~l~~~~~~L~~L~Ls~N~i~~~~~~---------- 214 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAK-----------------FLASIPASVTSLDLSANLLGLKSYA---------- 214 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHH-----------------HHHTSCTTCCEEECTTSCGGGSCHH----------
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHH-----------------HHHhCCCCCCEEECCCCCCChhHHH----------
Confidence 34444 7777777777776655543321 13334 3677777777766532110
Q ss_pred HHHhccCCCCCCcCccccC-ccCCcEEEccCCCCCCCcc----ccccCccchhhhcccCcccccccchhhhccccccccc
Q 045539 319 IILMDNCSISGNIPQVVGN-LGNLLVLELGGNNLTEPIP----ITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLV 393 (897)
Q Consensus 319 ~L~l~~n~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 393 (897)
.++..+.. .++|++|+|++|++++..+ ..+..+++|++|+|++|++.+..+..+.
T Consensus 215 -----------~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~--------- 274 (362)
T 3goz_A 215 -----------ELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCK--------- 274 (362)
T ss_dssp -----------HHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHH---------
T ss_pred -----------HHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHH---------
Confidence 12223333 2466777777777666443 2234445555555555554432222111
Q ss_pred ccccccccCCCcccccccccceeccccccccCCcc
Q 045539 394 LQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALP 428 (897)
Q Consensus 394 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 428 (897)
.++..+.++++|+.|++++|++....+
T Consensus 275 --------~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 275 --------ALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp --------HHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred --------HHHHHhccCCceEEEecCCCcCCCcch
Confidence 122345566666667777666655433
No 336
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=8.8e-24 Score=225.86 Aligned_cols=205 Identities=25% Similarity=0.212 Sum_probs=177.1
Q ss_pred ccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccc
Q 045539 335 VGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLR 414 (897)
Q Consensus 335 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 414 (897)
++++++++++++++|.++. +|..+. ++++.|+|++|++++..+..|..+++|++|+|++|++++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 6788999999999999997 454443 6899999999999998899999999999999999999965443 7899999
Q ss_pred eeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCC
Q 045539 415 VLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGD 494 (897)
Q Consensus 415 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 494 (897)
.|++++|+++ .+|..+..+++|+ .|+|++|++++..|..|..+++|++|+|++|+|++..+..|..
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~-------------~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 146 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALT-------------VLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP 146 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCC-------------EEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred EEECCCCcCC-cCchhhccCCCCC-------------EEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhccc
Confidence 9999999998 5788888888888 5555666666666788999999999999999999887888999
Q ss_pred cCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcccccCCCCCCCCCCCcccccchhhhhh
Q 045539 495 LSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIPRGGPFANLTAKSFMGNELLKM 558 (897)
Q Consensus 495 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~ 558 (897)
+++|+.|+|++|+|++..+..+..+++|+.|+|++|+++..++......++..+.+.|||+.|.
T Consensus 147 l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 147 TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred ccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 9999999999999996666678899999999999999996555445566788889999999885
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=1.1e-25 Score=251.78 Aligned_cols=257 Identities=19% Similarity=0.239 Sum_probs=180.3
Q ss_pred cccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCC---CCCCCcccC
Q 045539 236 TVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLD---GILPKSKGN 312 (897)
Q Consensus 236 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~---~~~p~~~~~ 312 (897)
.++..+..+++|+.|+|++|.++...+..+. ..+..+++|++|+|++|.+. +.+|..
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~-----------------~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~--- 82 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLS-----------------ENIASKKDLEIAEFSDIFTGRVKDEIPEA--- 82 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHH-----------------HTTTTCTTCCEEECCSCCTTSCGGGSHHH---
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHH-----------------HHHHhCCCccEEeCcccccCccccchhHH---
Confidence 3455566677777777777777655443321 12456777888888776443 222221
Q ss_pred chHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCC----CccccccCccchhhhcccCcccccccchhhhc---
Q 045539 313 LSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTE----PIPITFSQLQTLQALGLTRNKLAGPITDELCH--- 385 (897)
Q Consensus 313 l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--- 385 (897)
++.+ ...+..+++|++|+|++|++++ .+|..+..+++|++|+|++|++++..+..+..
T Consensus 83 ----~~~l-----------~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 147 (386)
T 2ca6_A 83 ----LRLL-----------LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQ 147 (386)
T ss_dssp ----HHHH-----------HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred ----HHHH-----------HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHH
Confidence 1111 1345677888888888888887 46667778888888888888887544444443
Q ss_pred -c---------cccccccccccccc-cCCC---cccccccccceeccccccccC-----CccccccccccceEEeecCCc
Q 045539 386 -L---------ARLHSLVLQGNKFS-GSIP---SCLGNLTSLRVLYLGLNRFTS-----ALPSTIWNLKDILFIDVSSNS 446 (897)
Q Consensus 386 -l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~ls~N~ 446 (897)
+ ++|++|+|++|+++ +.+| ..+..+++|+.|++++|+++. ..|..+..+++|+.|++++|.
T Consensus 148 ~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~ 227 (386)
T 2ca6_A 148 ELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNT 227 (386)
T ss_dssp HHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSC
T ss_pred HHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCC
Confidence 3 88999999999987 3444 456778889999999998872 344477778888855555444
Q ss_pred ccccceeecccCcCCCCCcccccCCcccccccccCceeccc----CCCCC--CCcCCCcEEeccCCccCC----CCchhh
Q 045539 447 LNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGS----IPESF--GDLSSLEVLDLSKNKISG----AIPASL 516 (897)
Q Consensus 447 l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~ 516 (897)
++.-- .+.+|..+..+++|++|+|++|++++. +|..+ +.+++|+.|+|++|+|++ .+|..+
T Consensus 228 l~~~g---------~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 228 FTHLG---------SSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp CHHHH---------HHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred CCcHH---------HHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 32100 045677888899999999999999875 56666 448999999999999997 488888
Q ss_pred -hhhcccceEeccCCcccccC
Q 045539 517 -QKLLYLKHLNLSFNKLEGEI 536 (897)
Q Consensus 517 -~~l~~L~~L~ls~N~l~~~~ 536 (897)
.++++|+.|+|++|++++..
T Consensus 299 ~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 299 DEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHCTTCCEEECTTSBSCTTS
T ss_pred HhcCCCceEEEccCCcCCcch
Confidence 66899999999999987543
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=1.5e-25 Score=245.95 Aligned_cols=189 Identities=15% Similarity=0.210 Sum_probs=125.6
Q ss_pred CCCcceeeeEeeCCCCeEEEEEeecccccccCCCCCCCC--CCCceecccCccccCcCCccccCCCCCcEEeccCccccC
Q 045539 61 TSVCSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNL--SSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFG 138 (897)
Q Consensus 61 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 138 (897)
.-|.+|.++.|+. ..+..++++++++. +..++.+ ++++.|++++|.+++..|. +.++++|++|+|++|.+.+
T Consensus 34 ~vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 3466899998863 34677888888776 3456666 7888899998888876655 6678888888888888876
Q ss_pred C-ccccccccccccEEEeeecCCCCCCCccccCcccccccccccc-ccccc-ccccccccccccccccccc-ccccc-CC
Q 045539 139 S-LSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATN-NLVGV-APVTIFNMSALKEIYLLNN-SLSGS-LP 213 (897)
Q Consensus 139 ~-~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~p 213 (897)
. ++..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. .+..+.++++|++|++++| .+++. ++
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 5 7777888888888888888887777777777888888888887 56652 4555666777777777777 66532 22
Q ss_pred cccccccc-ccceeecccc--ccc-ccccccccCCCcccEEEccccc
Q 045539 214 SRIDLSLP-NVETLNLGIN--SFY-GTVPSSITNASKLSDLELGVNL 256 (897)
Q Consensus 214 ~~~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~L~~N~ 256 (897)
..+ ..++ +|++|+|++| .++ +.+|..+..+++|++|++++|.
T Consensus 188 ~~~-~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 233 (336)
T 2ast_B 188 VAV-AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV 233 (336)
T ss_dssp HHH-HHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCT
T ss_pred HHH-HhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCC
Confidence 222 2344 5555555555 232 2333333444444444444443
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.9e-25 Score=249.96 Aligned_cols=94 Identities=26% Similarity=0.348 Sum_probs=51.0
Q ss_pred cccCccCCcEEEccCCCCC----CCccccccCccchhhhcccCcccccc----cchhhhc--cccccccccccccccc--
Q 045539 334 VVGNLGNLLVLELGGNNLT----EPIPITFSQLQTLQALGLTRNKLAGP----ITDELCH--LARLHSLVLQGNKFSG-- 401 (897)
Q Consensus 334 ~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~--l~~L~~L~L~~N~l~~-- 401 (897)
.+..+++|++|+|++|.++ +.+|..+..+++|++|+|++|++++. ++..+.. +++|++|+|++|++++
T Consensus 211 ~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g 290 (386)
T 2ca6_A 211 GLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDA 290 (386)
T ss_dssp TGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHH
T ss_pred HhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHH
Confidence 3445555666666666654 33445555555555555555555543 3344422 5566666666666654
Q ss_pred --CCCccc-ccccccceeccccccccCCc
Q 045539 402 --SIPSCL-GNLTSLRVLYLGLNRFTSAL 427 (897)
Q Consensus 402 --~~p~~~-~~l~~L~~L~L~~N~l~~~~ 427 (897)
.+|..+ .++++|+.|++++|++++..
T Consensus 291 ~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 291 VRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 255444 44566666666666665443
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=6.8e-23 Score=212.87 Aligned_cols=187 Identities=24% Similarity=0.269 Sum_probs=156.1
Q ss_pred cCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCcc-ccCCccccccccccccEEEeee-cCCCCCCCccc
Q 045539 91 TIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQ-LFGSLSFFIFNVSSVTTIDLSI-NGLSGEMPREI 168 (897)
Q Consensus 91 ~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~LdLs~-N~l~~~~p~~l 168 (897)
.+|. +. ++|++|+|++|++++..+..|+++++|++|++++|+ +....+..|.++++|++|+|++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 5666 43 389999999999997777789999999999999997 8888888999999999999999 99997666789
Q ss_pred cCccccccccccccccccccccccccccccc---ccccccc-cccccCCccccccccccc-eeecccccccccccccccC
Q 045539 169 GNLPYLARLAFATNNLVGVAPVTIFNMSALK---EIYLLNN-SLSGSLPSRIDLSLPNVE-TLNLGINSFYGTVPSSITN 243 (897)
Q Consensus 169 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~~l~~L~-~L~L~~N~l~~~~p~~l~~ 243 (897)
.++++|++|++++|+++++ |. |.++++|+ +|++++| +++ .+|...+..+++|+ +|++++|+++ .+|.....
T Consensus 102 ~~l~~L~~L~l~~n~l~~l-p~-~~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~ 177 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKMF-PD-LTKVYSTDIFFILEITDNPYMT-SIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFN 177 (239)
T ss_dssp ECCTTCCEEEEEEECCCSC-CC-CTTCCBCCSEEEEEEESCTTCC-EECTTTTTTTBSSEEEEECCSCCCC-EECTTTTT
T ss_pred CCCCCCCEEeCCCCCCccc-cc-cccccccccccEEECCCCcchh-hcCcccccchhcceeEEEcCCCCCc-ccCHhhcC
Confidence 9999999999999999985 44 88888888 9999999 887 67777677889999 9999999998 45544333
Q ss_pred CCcccEEEccccc-cccccCccccccccccccCCCCccccccccccc-CCCcEEEecCCCCCCC
Q 045539 244 ASKLSDLELGVNL-FSGFIPNTFVNMADNYLTSSTPELSFLSSLTNC-KKLKVLILTGNPLDGI 305 (897)
Q Consensus 244 l~~L~~L~L~~N~-l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l-~~L~~L~Ls~N~l~~~ 305 (897)
.++|+.|+|++|+ +++..+..| .++ ++|++|++++|+++++
T Consensus 178 ~~~L~~L~L~~n~~l~~i~~~~~---------------------~~l~~~L~~L~l~~N~l~~l 220 (239)
T 2xwt_C 178 GTKLDAVYLNKNKYLTVIDKDAF---------------------GGVYSGPSLLDVSQTSVTAL 220 (239)
T ss_dssp TCEEEEEECTTCTTCCEECTTTT---------------------TTCSBCCSEEECTTCCCCCC
T ss_pred CCCCCEEEcCCCCCcccCCHHHh---------------------hccccCCcEEECCCCccccC
Confidence 3889999999995 887766543 566 7899999999888753
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=3.2e-23 Score=224.30 Aligned_cols=158 Identities=18% Similarity=0.216 Sum_probs=80.4
Q ss_pred CCCceecccCccccCcCCccc--cCCCCCcEEeccCccccCCcc----ccccccccccEEEeeecCCCCCCCccccCccc
Q 045539 100 SSLQTLDLSHNKLSGNIPSSI--FNMHTLKLLYFSDNQLFGSLS----FFIFNVSSVTTIDLSINGLSGEMPREIGNLPY 173 (897)
Q Consensus 100 ~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~ 173 (897)
++|++|+|++|.+++..|..+ .++++|++|+|++|++.+..+ ..+..+++|++|+|++|++.+..|..|+.+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 445555555555555555555 555555555555555554333 22334555555555555555544555555555
Q ss_pred cccccccccccccc---cc-ccccccccccccccccccccccCCc---cccccccccceeecccccccccccccccCC--
Q 045539 174 LARLAFATNNLVGV---AP-VTIFNMSALKEIYLLNNSLSGSLPS---RIDLSLPNVETLNLGINSFYGTVPSSITNA-- 244 (897)
Q Consensus 174 L~~L~L~~N~l~~~---~~-~~~~~l~~L~~L~L~~N~l~~~~p~---~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-- 244 (897)
|++|+|++|++.+. .+ ..+.++++|++|+|++|+++ .++. .++..+++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 55555555554431 11 11245555555555555554 2222 122344555555555555555555444444
Q ss_pred -CcccEEEccccccc
Q 045539 245 -SKLSDLELGVNLFS 258 (897)
Q Consensus 245 -~~L~~L~L~~N~l~ 258 (897)
++|++|+|++|+++
T Consensus 250 ~~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 250 SSALNSLNLSFAGLE 264 (310)
T ss_dssp CTTCCCEECCSSCCC
T ss_pred cCcCCEEECCCCCCC
Confidence 35555555555555
No 342
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.5e-22 Score=211.89 Aligned_cols=183 Identities=21% Similarity=0.237 Sum_probs=139.7
Q ss_pred cCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceecc
Q 045539 339 GNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYL 418 (897)
Q Consensus 339 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 418 (897)
.+.++++++++.++. +|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|+.|+|
T Consensus 14 ~~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 356678888888876 444443 46778888888888777777888888888888888888777777888888888888
Q ss_pred ccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCC
Q 045539 419 GLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSL 498 (897)
Q Consensus 419 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 498 (897)
++|++++..+..|..+++|+ .|+|++|++++..+..|+.+++|++|+|++|+|++..|..|..+++|
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~-------------~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 157 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLD-------------KLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNL 157 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCC-------------EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCCcccccChhHhcccCCCC-------------EEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCC
Confidence 88888876667777777777 44444555555556667788888888888888887666678888888
Q ss_pred cEEeccCCccCCCCchhhhhhcccceEeccCCcccccCC
Q 045539 499 EVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIP 537 (897)
Q Consensus 499 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 537 (897)
++|+|++|+|++..|..+..+++|+.|+|++|++++..+
T Consensus 158 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 158 QTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 888888888887777788888888888888888876533
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=5.9e-23 Score=222.20 Aligned_cols=190 Identities=21% Similarity=0.200 Sum_probs=108.9
Q ss_pred cCCcEEEccCCCCCCCccccc--cCccchhhhcccCcccccccc----hhhhcccccccccccccccccCCCcccccccc
Q 045539 339 GNLLVLELGGNNLTEPIPITF--SQLQTLQALGLTRNKLAGPIT----DELCHLARLHSLVLQGNKFSGSIPSCLGNLTS 412 (897)
Q Consensus 339 ~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 412 (897)
++|++|++++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..++++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 446666666666666666655 666666666666666665433 23345666666666666666555566666666
Q ss_pred cceeccccccccCC--c--cccccccccceEEeecCCccc--------------ccceeecccCcCCCCCcccccCC---
Q 045539 413 LRVLYLGLNRFTSA--L--PSTIWNLKDILFIDVSSNSLN--------------VLIGLNFSRNNLSGDIPITIGGL--- 471 (897)
Q Consensus 413 L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~ls~N~l~--------------~l~~l~ls~n~l~~~~p~~~~~l--- 471 (897)
|++|+|++|++.+. + +..+..+++|++|++++|+++ .|+.|+|++|++++.+|..++.+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 66666666665432 1 122345555665555554442 22355555555555555555554
Q ss_pred cccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCccc
Q 045539 472 KNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLE 533 (897)
Q Consensus 472 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 533 (897)
++|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|+.|+|++|+++
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 46666666666666 4555553 5666666666666632 32 455566666666666654
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=4.8e-24 Score=233.82 Aligned_cols=149 Identities=21% Similarity=0.199 Sum_probs=81.1
Q ss_pred CceecccCccccCcCCccccCC--CCCcEEeccCccccCCccccccccccccEEEeeecCCCCC-CCccccCcccccccc
Q 045539 102 LQTLDLSHNKLSGNIPSSIFNM--HTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGE-MPREIGNLPYLARLA 178 (897)
Q Consensus 102 L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~-~p~~l~~l~~L~~L~ 178 (897)
++.||+++|.+. |..+..+ +++++|++++|.+.+.++. +..+++|++|+|++|.+++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 566777777665 4556665 6677777777766655544 33566666666666666543 555556666666666
Q ss_pred cccccccccccccccccccccccccccc-ccccc-CCccccccccccceeecccc-ccccc-ccccccCCC-cccEEEcc
Q 045539 179 FATNNLVGVAPVTIFNMSALKEIYLLNN-SLSGS-LPSRIDLSLPNVETLNLGIN-SFYGT-VPSSITNAS-KLSDLELG 253 (897)
Q Consensus 179 L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~~L~L~ 253 (897)
|++|++++..+..++++++|++|+|++| .+++. ++. ....+++|++|+|++| .+++. ++..+..++ +|++|+++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~-~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQT-LLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHH-HHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHH-HHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 6666666555555555666666666655 34431 221 1223444444444444 44432 233344444 44444444
Q ss_pred cc
Q 045539 254 VN 255 (897)
Q Consensus 254 ~N 255 (897)
+|
T Consensus 204 ~~ 205 (336)
T 2ast_B 204 GY 205 (336)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=2.8e-22 Score=220.70 Aligned_cols=125 Identities=18% Similarity=0.171 Sum_probs=76.1
Q ss_pred cceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCcc-c
Q 045539 64 CSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLS-F 142 (897)
Q Consensus 64 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~ 142 (897)
|+|..|.|+ +++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.++ .
T Consensus 9 C~~~~v~C~------------~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQ------------ESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEE------------STTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEec------------CCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 677777775 34455 567665 3678888888888885445578888888888888887755443 4
Q ss_pred cccccccccE-EEeeecCCCCCCCccccCccccccccccccccccccccccccccccccccc
Q 045539 143 FIFNVSSVTT-IDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYL 203 (897)
Q Consensus 143 ~~~~l~~L~~-LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 203 (897)
.|.++++|+. +++++|++++..|..|..+++|++|++++|+++.+.+..+....++..|++
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l 135 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDI 135 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEE
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhh
Confidence 5566665543 455556666444555555555555555555555444444444444444444
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=8.7e-23 Score=224.81 Aligned_cols=241 Identities=16% Similarity=0.130 Sum_probs=156.2
Q ss_pred cEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccccce-eecc
Q 045539 151 TTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVET-LNLG 229 (897)
Q Consensus 151 ~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~-L~L~ 229 (897)
++++.++|+++ .+|..+. +++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+|...+..++++.+ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45666677776 6676552 567777888888877777778888888888888888776777777777777654 5666
Q ss_pred cccccccccccccCCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecC-CCCCCCCCC
Q 045539 230 INSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTG-NPLDGILPK 308 (897)
Q Consensus 230 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~-N~l~~~~p~ 308 (897)
.|+++...|..|.++++|++|++++|++++..+..+ ....++..|++.+ |++..+.+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~---------------------~~~~~l~~l~l~~~~~i~~l~~~ 147 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK---------------------IHSLQKVLLDIQDNINIHTIERN 147 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTT---------------------CCBSSCEEEEEESCTTCCEECTT
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhh---------------------cccchhhhhhhcccccccccccc
Confidence 788887777888888888888888888877665443 2345677777765 345433222
Q ss_pred cccCchHHHHHHHhccCCCCCCcCccccCc-cCCcEEEccCCCCCCCccccccCccchhhhcccC-cccccccchhhhcc
Q 045539 309 SKGNLSLSLEIILMDNCSISGNIPQVVGNL-GNLLVLELGGNNLTEPIPITFSQLQTLQALGLTR-NKLAGPITDELCHL 386 (897)
Q Consensus 309 ~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l 386 (897)
.|..+ ..++.|+|++|+|+.+.+..| ...+|++|++++ |+++...++.|..+
T Consensus 148 -------------------------~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l 201 (350)
T 4ay9_X 148 -------------------------SFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGA 201 (350)
T ss_dssp -------------------------SSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTE
T ss_pred -------------------------chhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccC
Confidence 23333 246677777777776433333 445677777764 45554444566777
Q ss_pred cccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCC
Q 045539 387 ARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSN 445 (897)
Q Consensus 387 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 445 (897)
++|++|+|++|+|+...+..+.++++|+.+++. .++ .+| .+.++++|+.++++++
T Consensus 202 ~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~--~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 202 SGPVILDISRTRIHSLPSYGLENLKKLRARSTY--NLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp ECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT--TCC-CCC-CTTTCCSCCEEECSCH
T ss_pred cccchhhcCCCCcCccChhhhccchHhhhccCC--CcC-cCC-CchhCcChhhCcCCCC
Confidence 777777777777774444445555555554442 233 344 3566677776666543
No 347
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=4.2e-23 Score=238.91 Aligned_cols=205 Identities=21% Similarity=0.320 Sum_probs=168.0
Q ss_pred CCCCCCCCc-----ceeee-EeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEE
Q 045539 56 NWTSSTSVC-----SWIGI-TCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLL 129 (897)
Q Consensus 56 ~w~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 129 (897)
+|..+.++| .|.|+ .|.. ++++.|+|+++++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L 105 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYL 105 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEE
Confidence 676666677 79999 7864 479999999999997 888774 89999999999999 678 567999999
Q ss_pred eccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccccccccccccccccccccccccccccccccccccc
Q 045539 130 YFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLS 209 (897)
Q Consensus 130 ~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 209 (897)
+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|+++.+ .+++|++|+|++|+|+
T Consensus 106 ~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~ 173 (571)
T 3cvr_A 106 DACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLT 173 (571)
T ss_dssp ECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCS
T ss_pred EccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCC
Confidence 999999988 555 655 99999999999996 777 68999999999999998643 6789999999999999
Q ss_pred ccCCccccccccccceeecccccccccccccccCCCcc-------cEEEccccccccccCccccccccccccCCCCcccc
Q 045539 210 GSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKL-------SDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSF 282 (897)
Q Consensus 210 ~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-------~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~ 282 (897)
+ +|. +. ++|+.|+|++|.|+ .+|. +.. +| +.|+|++|+|+.+ |..
T Consensus 174 ~-lp~-l~---~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~l-p~~------------------ 225 (571)
T 3cvr_A 174 F-LPE-LP---ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITHI-PEN------------------ 225 (571)
T ss_dssp C-CCC-CC---TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCCC-CGG------------------
T ss_pred C-cch-hh---CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcceec-CHH------------------
Confidence 5 887 43 89999999999998 6666 654 77 9999999999854 332
Q ss_pred cccccccCCCcEEEecCCCCCCCCCCcccC
Q 045539 283 LSSLTNCKKLKVLILTGNPLDGILPKSKGN 312 (897)
Q Consensus 283 l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 312 (897)
+..+++|++|+|++|++++.+|..+..
T Consensus 226 ---l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 226 ---ILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp ---GGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred ---HhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 345789999999999998776654443
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=3.1e-22 Score=216.02 Aligned_cols=196 Identities=24% Similarity=0.385 Sum_probs=158.0
Q ss_pred ccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccch
Q 045539 286 LTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTL 365 (897)
Q Consensus 286 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 365 (897)
...+++|++|++++|.+... | .+..+++|++|++++|++++..+ +..+++|
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l--------------------------~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L 87 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTTI--------------------------E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKI 87 (308)
T ss_dssp HHHHHTCCEEECTTSCCCCC--------------------------T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSC
T ss_pred HHHcCCcCEEEeeCCCccCc--------------------------h-hhhccCCCCEEEccCCcCCCChh--HccCCCC
Confidence 45678899999999988742 2 35678899999999999988555 8899999
Q ss_pred hhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCC
Q 045539 366 QALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSN 445 (897)
Q Consensus 366 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 445 (897)
++|+|++|++++. ..+..+++|++|++++|++++ +|. +..+++|+.|++++|++++..+ +..+++|++|++++
T Consensus 88 ~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~- 160 (308)
T 1h6u_A 88 TELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGN- 160 (308)
T ss_dssp CEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCS-
T ss_pred CEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccC-
Confidence 9999999999864 368889999999999999985 443 8899999999999999987544 77777777555544
Q ss_pred cccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceE
Q 045539 446 SLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHL 525 (897)
Q Consensus 446 ~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 525 (897)
|++++. +. +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++.. .+..+++|+.|
T Consensus 161 ------------n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L 222 (308)
T 1h6u_A 161 ------------AQVSDL-TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIV 222 (308)
T ss_dssp ------------SCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEE
T ss_pred ------------CcCCCC-hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEE
Confidence 444443 33 7889999999999999986443 889999999999999998544 38899999999
Q ss_pred eccCCccccc
Q 045539 526 NLSFNKLEGE 535 (897)
Q Consensus 526 ~ls~N~l~~~ 535 (897)
+|++|++++.
T Consensus 223 ~l~~N~i~~~ 232 (308)
T 1h6u_A 223 TLTNQTITNQ 232 (308)
T ss_dssp EEEEEEEECC
T ss_pred EccCCeeecC
Confidence 9999999863
No 349
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=4e-22 Score=215.16 Aligned_cols=212 Identities=22% Similarity=0.345 Sum_probs=107.0
Q ss_pred ccccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEE
Q 045539 172 PYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLE 251 (897)
Q Consensus 172 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 251 (897)
.++..+.+..+.+++... +..+++|++|++++|.++ .+|. +..+++|++|+|++|.+++..+ +..+++|++|+
T Consensus 19 ~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~~--~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~ 91 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIEG--VQYLNNLIGLELKDNQITDLAP--LKNLTKITELE 91 (308)
T ss_dssp HHHHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEE
T ss_pred HHHHHHHhCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cchh--hhccCCCCEEEccCCcCCCChh--HccCCCCCEEE
Confidence 334444455555444322 345556666666666655 3442 2245566666666666554333 55666666666
Q ss_pred ccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCc
Q 045539 252 LGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNI 331 (897)
Q Consensus 252 L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~ 331 (897)
|++|.+++.. .+..+++|++|+|++|+++++.
T Consensus 92 L~~n~l~~~~-----------------------~~~~l~~L~~L~l~~n~l~~~~------------------------- 123 (308)
T 1h6u_A 92 LSGNPLKNVS-----------------------AIAGLQSIKTLDLTSTQITDVT------------------------- 123 (308)
T ss_dssp CCSCCCSCCG-----------------------GGTTCTTCCEEECTTSCCCCCG-------------------------
T ss_pred ccCCcCCCch-----------------------hhcCCCCCCEEECCCCCCCCch-------------------------
Confidence 6666555421 1345556666666666555320
Q ss_pred CccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCccccccc
Q 045539 332 PQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLT 411 (897)
Q Consensus 332 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 411 (897)
.+..+++|++|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++..+ +..++
T Consensus 124 --~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~ 195 (308)
T 1h6u_A 124 --PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLP 195 (308)
T ss_dssp --GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCT
T ss_pred --hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCC
Confidence 13444555555555555554332 4555555555555555553222 4555555555555555553222 45555
Q ss_pred ccceeccccccccCCccccccccccceEEeecCCccc
Q 045539 412 SLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLN 448 (897)
Q Consensus 412 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 448 (897)
+|+.|++++|++++..| +..+++|+.|++++|.++
T Consensus 196 ~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 196 NLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp TCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred CCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 55555555555554322 444555554444444443
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=2.1e-22 Score=204.35 Aligned_cols=183 Identities=23% Similarity=0.276 Sum_probs=128.3
Q ss_pred CcceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccc
Q 045539 63 VCSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSF 142 (897)
Q Consensus 63 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 142 (897)
.|+|.+|.|+.. +++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++.+..+.
T Consensus 6 ~C~~~~v~c~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 6 SCSGTTVECYSQ------------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp EEETTEEECCSS------------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EECCCEEEecCC------------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 389999999743 222 344333 34677777777777765555677777777777777777766666
Q ss_pred cccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCccccccccc
Q 045539 143 FIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPN 222 (897)
Q Consensus 143 ~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~ 222 (897)
.|.++++|++|+|++|++++..+..|+++++|++|+|++|+++++.+..|.++++|++|+|++|+++ .+|...+..+++
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~ 149 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTS 149 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTT
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc-eeCHHHhccCCC
Confidence 6777777777777777777555555677777777777777777776666777777777777777777 455555556777
Q ss_pred cceeecccccccccccccccCCCcccEEEccccccccccCcccccc
Q 045539 223 VETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNM 268 (897)
Q Consensus 223 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l 268 (897)
|++|+|++|.+.+ .+++|++|+++.|.++|.+|..+..+
T Consensus 150 L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 150 LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp CCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred ccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 7777777776653 34567777777777777777766554
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.7e-22 Score=214.35 Aligned_cols=153 Identities=17% Similarity=0.145 Sum_probs=122.3
Q ss_pred HHHHHHHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhH------------------HHHHHHHHHHHHHHhc
Q 045539 609 YHELLRATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYE------------------RALKSFEDECEVMKRI 670 (897)
Q Consensus 609 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l 670 (897)
...+......|.+.+.||+|+||.||+|++.+|+.||+|+++.... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3344455567778899999999999999987799999999864321 2356788999999999
Q ss_pred CCCccceEeeeecCCCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeee
Q 045539 671 RHRNLVKIISSCSNDDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLL 750 (897)
Q Consensus 671 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll 750 (897)
+ | +++++++.. +..|+||||++|++|.+ +.. .+...++.|++.||+|| |++||+||||||+||++
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~l---H~~giiHrDlkp~NILl 226 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKF---YHRGIVHGDLSQYNVLV 226 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEE
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHH---HHCCCEeCCCCHHHEEE
Confidence 9 4 666665543 56699999999999988 422 23457999999999999 89999999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccC
Q 045539 751 DEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGT 792 (897)
Q Consensus 751 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 792 (897)
+ ++.+||+|||+|+. +..|.|||++.
T Consensus 227 ~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp E-TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred E-CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 9 99999999999863 34478888753
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.2e-20 Score=191.43 Aligned_cols=181 Identities=22% Similarity=0.245 Sum_probs=115.6
Q ss_pred ceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccc
Q 045539 103 QTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATN 182 (897)
Q Consensus 103 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N 182 (897)
+.++++++.++ .+|..+ .++|++|+|++|++.+..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 46777888887 566544 357888888888887777777777888888888888887555555677777777777777
Q ss_pred cccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccC
Q 045539 183 NLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIP 262 (897)
Q Consensus 183 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 262 (897)
+++++.+..|.++++|++|+|++|+++ .+|. ..+..+++|++|+|++|.+++..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~------------------------~~~~~l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQ-SLPD------------------------GVFDKLTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-CCCT------------------------TTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCc-ccCH------------------------hHhccCCcCCEEECCCCccceeCH
Confidence 777666666666666666666666665 3333 334445555555555555554433
Q ss_pred ccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccC
Q 045539 263 NTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGN 340 (897)
Q Consensus 263 ~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~ 340 (897)
.. +..+++|++|++++|++.+..| +++.|.+..|+++|.+|..++.++.
T Consensus 142 ~~---------------------~~~l~~L~~L~l~~N~~~~~~~--------~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 142 GV---------------------FDRLTSLQYIWLHDNPWDCTCP--------GIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TT---------------------TTTCTTCCEEECCSCCBCCCTT--------TTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HH---------------------hccCCCccEEEecCCCeecCCC--------CHHHHHHHHHhCCceeeccCccccC
Confidence 22 2345566666666665554332 4566666666666666666655544
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=2.6e-21 Score=223.92 Aligned_cols=190 Identities=24% Similarity=0.310 Sum_probs=123.8
Q ss_pred CCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhc
Q 045539 290 KKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALG 369 (897)
Q Consensus 290 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 369 (897)
.+|+.|+|++|++++ +|..+. .+|++|++++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|+.|+
T Consensus 59 ~~L~~L~Ls~n~L~~-lp~~l~---~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~ 126 (571)
T 3cvr_A 59 NQFSELQLNRLNLSS-LPDNLP---PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLD 126 (571)
T ss_dssp TTCSEEECCSSCCSC-CCSCCC---TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEE
T ss_pred CCccEEEeCCCCCCc-cCHhHc---CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEE
Confidence 489999999999987 555443 25777777777777 445 346677777777777776 454 554 677777
Q ss_pred ccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccc
Q 045539 370 LTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNV 449 (897)
Q Consensus 370 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 449 (897)
|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|++++ +|. +. ++|++|++++
T Consensus 127 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~----- 189 (571)
T 3cvr_A 127 VDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVST----- 189 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCS-----
T ss_pred CCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcC-----
Confidence 77777775 444 46677777777777774 554 45677777777777765 555 43 5555444333
Q ss_pred cceeecccCcCCCCCcccccCCccc-------ccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcc
Q 045539 450 LIGLNFSRNNLSGDIPITIGGLKNL-------QQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLY 521 (897)
Q Consensus 450 l~~l~ls~n~l~~~~p~~~~~l~~L-------~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 521 (897)
|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+..
T Consensus 190 --------N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 190 --------NLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp --------SCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred --------CCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 3333 3343 332 44 77777777777 46766667777777777777777777777766654
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=1.2e-20 Score=194.28 Aligned_cols=162 Identities=23% Similarity=0.252 Sum_probs=118.8
Q ss_pred CCCCCCCCcceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCcc
Q 045539 56 NWTSSTSVCSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQ 135 (897)
Q Consensus 56 ~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 135 (897)
-|..++..|+|.+|.|+.. +++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 11 ~~~~~~~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 3445778899999999642 233 5676554 889999999999998888899999999999999999
Q ss_pred ccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCcc
Q 045539 136 LFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSR 215 (897)
Q Consensus 136 l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 215 (897)
|....+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+++.+ |..+.++++|++|+|++|+++ .+|..
T Consensus 76 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~l-p~~~~~l~~L~~L~L~~N~l~-~~~~~ 153 (229)
T 3e6j_A 76 LGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTEL-PRGIERLTHLTHLALDQNQLK-SIPHG 153 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSC-CTTGGGCTTCSEEECCSSCCC-CCCTT
T ss_pred CCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccccc-CcccccCCCCCEEECCCCcCC-ccCHH
Confidence 9777777788888888888888888866566677777777777777777744 555666677777777776666 44444
Q ss_pred ccccccccceeeccccccc
Q 045539 216 IDLSLPNVETLNLGINSFY 234 (897)
Q Consensus 216 ~~~~l~~L~~L~L~~N~l~ 234 (897)
.+..+++|+.|+|++|.+.
T Consensus 154 ~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp TTTTCTTCCEEECTTSCBC
T ss_pred HHhCCCCCCEEEeeCCCcc
Confidence 4444455555555555444
No 355
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=1.2e-21 Score=235.34 Aligned_cols=240 Identities=20% Similarity=0.184 Sum_probs=89.6
Q ss_pred CChhHHHHHHHHHhccccCCCcccccCCC-CCCCCcceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceeccc
Q 045539 30 NITTDQQALLALKAHISYDHTNLFARNWT-SSTSVCSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLS 108 (897)
Q Consensus 30 ~~~~~~~aLl~~k~~~~~~~~~~~~~~w~-~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls 108 (897)
....++++|+++..+.......... .|. ..+.++.|.+++++. .+|+.|+|.++++.+ ++.. .|+.++|+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~-----~l~~l~Ls 199 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQ-QPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQA-----LLQHKKLS 199 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccC-CCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhh-----HhhcCccC
Confidence 4467889999998877433333222 564 345578999998864 678999998888875 3333 34555666
Q ss_pred CccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccccccccc
Q 045539 109 HNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVA 188 (897)
Q Consensus 109 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 188 (897)
+|.|.+. +++.|++. .++..+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|+|+ .+
T Consensus 200 ~~~i~~~--------------~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~l 262 (727)
T 4b8c_D 200 QYSIDED--------------DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-EL 262 (727)
T ss_dssp -------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CC
T ss_pred cccccCc--------------ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-cc
Confidence 6655421 23333332 34444555555555555555555 55555555555555555555555 33
Q ss_pred cccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccCcccccc
Q 045539 189 PVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNM 268 (897)
Q Consensus 189 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l 268 (897)
|..|+++++|++|+|++|+|+ .+|..+. .+++|++|+|++|.|+ .+|..|+++
T Consensus 263 p~~~~~l~~L~~L~Ls~N~l~-~lp~~~~-~l~~L~~L~L~~N~l~-~lp~~~~~l------------------------ 315 (727)
T 4b8c_D 263 PAEIKNLSNLRVLDLSHNRLT-SLPAELG-SCFQLKYFYFFDNMVT-TLPWEFGNL------------------------ 315 (727)
T ss_dssp CGGGGGGTTCCEEECTTSCCS-SCCSSGG-GGTTCSEEECCSSCCC-CCCSSTTSC------------------------
T ss_pred ChhhhCCCCCCEEeCcCCcCC-ccChhhc-CCCCCCEEECCCCCCC-ccChhhhcC------------------------
Confidence 445555555555555555555 4444432 3444444444444443 334444444
Q ss_pred ccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccC
Q 045539 269 ADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGG 348 (897)
Q Consensus 269 ~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 348 (897)
++|++|+|++|+|++.+|..+..+......+++.+|.+++.+|.. |..|+++.
T Consensus 316 ---------------------~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~ 368 (727)
T 4b8c_D 316 ---------------------CNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINT 368 (727)
T ss_dssp ---------------------TTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------------
T ss_pred ---------------------CCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeec
Confidence 455555555555555555555444434556778888888877754 45566666
Q ss_pred C
Q 045539 349 N 349 (897)
Q Consensus 349 N 349 (897)
|
T Consensus 369 n 369 (727)
T 4b8c_D 369 D 369 (727)
T ss_dssp -
T ss_pred c
Confidence 6
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=2.1e-20 Score=218.84 Aligned_cols=193 Identities=27% Similarity=0.322 Sum_probs=122.1
Q ss_pred cccccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEE
Q 045539 171 LPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDL 250 (897)
Q Consensus 171 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 250 (897)
+.++..+.+..+.+..+.+ +..+++|+.|+|++|.++ .+|. +..+++|+.|+|++|.+.+..| +..+++|+.|
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCTT--GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CChH--HccCCCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 4455556666666665543 456666677777776665 4442 2356666677777766665444 6667777777
Q ss_pred EccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCC
Q 045539 251 ELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGN 330 (897)
Q Consensus 251 ~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~ 330 (897)
+|++|.+++.. .+..+++|+.|+|++|++.++
T Consensus 93 ~Ls~N~l~~l~-----------------------~l~~l~~L~~L~Ls~N~l~~l------------------------- 124 (605)
T 1m9s_A 93 FLDENKIKDLS-----------------------SLKDLKKLKSLSLEHNGISDI------------------------- 124 (605)
T ss_dssp ECCSSCCCCCT-----------------------TSTTCTTCCEEECTTSCCCCC-------------------------
T ss_pred ECcCCCCCCCh-----------------------hhccCCCCCEEEecCCCCCCC-------------------------
Confidence 77777665421 245666777777777766532
Q ss_pred cCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccc
Q 045539 331 IPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNL 410 (897)
Q Consensus 331 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 410 (897)
..+..+++|+.|+|++|+++++ ..|..+++|+.|+|++|+|.+..| +..+++|+.|+|++|+|++. ..+..+
T Consensus 125 --~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l 196 (605)
T 1m9s_A 125 --NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGL 196 (605)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTC
T ss_pred --ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccC
Confidence 1245566677777777777664 456667777777777777765554 66677777777777777643 346677
Q ss_pred cccceeccccccccCC
Q 045539 411 TSLRVLYLGLNRFTSA 426 (897)
Q Consensus 411 ~~L~~L~L~~N~l~~~ 426 (897)
++|+.|+|++|++++.
T Consensus 197 ~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 197 KNLDVLELFSQECLNK 212 (605)
T ss_dssp TTCSEEECCSEEEECC
T ss_pred CCCCEEEccCCcCcCC
Confidence 7777777777777653
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=5.5e-20 Score=196.57 Aligned_cols=191 Identities=23% Similarity=0.277 Sum_probs=158.8
Q ss_pred HHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhccccccccccc
Q 045539 316 SLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQ 395 (897)
Q Consensus 316 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 395 (897)
.+..+.+..+.+++..+ +..+++|+.|++++|.+++. + .+..+++|++|+|++|++++..+ +..+++|++|+++
T Consensus 25 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred HHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECC
Confidence 56666777777775443 46789999999999999875 3 48889999999999999997655 8999999999999
Q ss_pred ccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccc
Q 045539 396 GNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQ 475 (897)
Q Consensus 396 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~ 475 (897)
+|++++ +| .+..+++|+.|++++|++++. ..+..+++|++|++++| ++++. ..++.+++|+
T Consensus 99 ~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n-------------~l~~~--~~l~~l~~L~ 159 (291)
T 1h6t_A 99 ENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNN-------------KITDI--TVLSRLTKLD 159 (291)
T ss_dssp SSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSS-------------CCCCC--GGGGGCTTCS
T ss_pred CCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCC-------------cCCcc--hhhccCCCCC
Confidence 999985 44 489999999999999999863 46778888885555555 44443 4688899999
Q ss_pred cccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCccccc
Q 045539 476 QMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGE 535 (897)
Q Consensus 476 ~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 535 (897)
.|++++|++++..| +..+++|+.|+|++|+|++ +| .+..+++|+.|++++|+++..
T Consensus 160 ~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 160 TLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred EEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 99999999997555 9999999999999999984 55 489999999999999999863
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=4.8e-22 Score=231.49 Aligned_cols=233 Identities=18% Similarity=0.193 Sum_probs=148.9
Q ss_pred ceeeeEeeCCCCeEEEEEeeccccccc---------------------CC-------CCCCCCCCCceecccCccccCcC
Q 045539 65 SWIGITCDVNSHRVIGLNISSFNLQGT---------------------IP-------PQLGNLSSLQTLDLSHNKLSGNI 116 (897)
Q Consensus 65 ~w~gv~c~~~~~~v~~l~l~~~~l~g~---------------------~~-------~~l~~l~~L~~L~Ls~n~l~~~~ 116 (897)
.|..+.|+...++|..+++..-.+.-. .| ..+..+++|+.|+|++|+++ .+
T Consensus 286 ~W~~~~~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~L~~L~Ls~n~L~-~L 364 (567)
T 1dce_A 286 EWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEKST-VL 364 (567)
T ss_dssp CCBCTTSSCCSEEEEEEECCGGGTSTTSSEEEEEEEETTTTEEEEEEEETTCSEEEEECCSTTTTSSSCCCCHHHHH-HH
T ss_pred eeccCCcccccceeEEeecCccccccccccceEEEeeccCCCCccccccCCCchhhhcccccCccceeccCChhhHH-hh
Confidence 588777776667777777754332110 00 01356778888888888886 67
Q ss_pred CccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccc-ccccccccccccccccc
Q 045539 117 PSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLA-FATNNLVGVAPVTIFNM 195 (897)
Q Consensus 117 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~-L~~N~l~~~~~~~~~~l 195 (897)
|.++++|++|++|++++|......+..+ ..+.+.+.+|..++++++|+.|+ ++.|.+
T Consensus 365 p~~i~~l~~L~~L~l~~n~~l~~l~~ll-----------~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~----------- 422 (567)
T 1dce_A 365 QSELESCKELQELEPENKWCLLTIILLM-----------RALDPLLYEKETLQYFSTLKAVDPMRAAYL----------- 422 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHH-----------HHHCTGGGHHHHHHHHHHHHHHCGGGHHHH-----------
T ss_pred HHHHHHHHHHHHhccccchhhhhHHHHH-----------HhcccccCCHHHHHHHHhcccCcchhhccc-----------
Confidence 8888888888888886664211111111 12234557788888888888888 666643
Q ss_pred ccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccCccccccccccccC
Q 045539 196 SALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMADNYLTS 275 (897)
Q Consensus 196 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~ 275 (897)
.+|+.+.+++|.++ .+|. ..|+.|+|++|.+++ +|. ++.+++|+.|+|++|.|+ .+|..
T Consensus 423 ~~L~~l~l~~n~i~-~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~----------- 481 (567)
T 1dce_A 423 DDLRSKFLLENSVL-KMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPA----------- 481 (567)
T ss_dssp HHHHHHHHHHHHHH-HHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGG-----------
T ss_pred chhhhhhhhccccc-ccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchh-----------
Confidence 46778888888887 3332 358899999999986 565 888888888888888877 33432
Q ss_pred CCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCc
Q 045539 276 STPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPI 355 (897)
Q Consensus 276 ~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 355 (897)
++++++|++|+|++|+|+++ | .++.+++|++|+|++|+|++..
T Consensus 482 ----------~~~l~~L~~L~Ls~N~l~~l--------------------------p-~l~~l~~L~~L~Ls~N~l~~~~ 524 (567)
T 1dce_A 482 ----------LAALRCLEVLQASDNALENV--------------------------D-GVANLPRLQELLLCNNRLQQSA 524 (567)
T ss_dssp ----------GGGCTTCCEEECCSSCCCCC--------------------------G-GGTTCSSCCEEECCSSCCCSSS
T ss_pred ----------hhcCCCCCEEECCCCCCCCC--------------------------c-ccCCCCCCcEEECCCCCCCCCC
Confidence 34556666666666665531 2 3445556666666666666554
Q ss_pred -cccccCccchhhhcccCcccccc
Q 045539 356 -PITFSQLQTLQALGLTRNKLAGP 378 (897)
Q Consensus 356 -~~~~~~l~~L~~L~Ls~N~l~~~ 378 (897)
|..|+.+++|+.|+|++|++++.
T Consensus 525 ~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 525 AIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp TTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CcHHHhcCCCCCEEEecCCcCCCC
Confidence 55555555555555555555543
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=1.3e-19 Score=185.04 Aligned_cols=154 Identities=19% Similarity=0.239 Sum_probs=115.3
Q ss_pred cceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCcccc
Q 045539 64 CSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFF 143 (897)
Q Consensus 64 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 143 (897)
|.|..|.|+ +++++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|.+..|..
T Consensus 11 C~~~~v~c~------------~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~ 75 (220)
T 2v9t_B 11 CSNNIVDCR------------GKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDA 75 (220)
T ss_dssp EETTEEECT------------TSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTT
T ss_pred ECCCEEEcC------------CCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHH
Confidence 667766664 34455 5676654 68999999999999777778999999999999999998888888
Q ss_pred ccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCcccccccccc
Q 045539 144 IFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNV 223 (897)
Q Consensus 144 ~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L 223 (897)
|.++++|++|+|++|+|++..+..|..+++|++|+|++|+++++.|..|.++++|++|+|++|+++ .++...+..+++|
T Consensus 76 ~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L 154 (220)
T 2v9t_B 76 FQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPLRAI 154 (220)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTC
T ss_pred hhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC-EECHHHHhCCCCC
Confidence 888888999999988888544555778888888888888888887777777777777777777776 3443333344555
Q ss_pred ceeecccccc
Q 045539 224 ETLNLGINSF 233 (897)
Q Consensus 224 ~~L~L~~N~l 233 (897)
++|+|++|.+
T Consensus 155 ~~L~L~~N~~ 164 (220)
T 2v9t_B 155 QTMHLAQNPF 164 (220)
T ss_dssp CEEECCSSCE
T ss_pred CEEEeCCCCc
Confidence 5555555544
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=7.1e-20 Score=202.36 Aligned_cols=176 Identities=27% Similarity=0.248 Sum_probs=156.2
Q ss_pred EEEeecccccccCCCCCCCCCCCceecccCccccCcCCcccc-CCCCCcEEeccCccccCCccccccccccccEEEeeec
Q 045539 80 GLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIF-NMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSIN 158 (897)
Q Consensus 80 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N 158 (897)
.+++++++++ .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|.+..+..|.++++|++|||++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 3566677777 4777664 4689999999999988888887 9999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCcccc---ccccccceeecccccccc
Q 045539 159 GLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRID---LSLPNVETLNLGINSFYG 235 (897)
Q Consensus 159 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~---~~l~~L~~L~L~~N~l~~ 235 (897)
+|++..+..|.++++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ .+|..++ ..+++|+.|+|++|+|++
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 999777778999999999999999999999999999999999999999999 6888776 468999999999999997
Q ss_pred cccccccCCCc--ccEEEcccccccc
Q 045539 236 TVPSSITNASK--LSDLELGVNLFSG 259 (897)
Q Consensus 236 ~~p~~l~~l~~--L~~L~L~~N~l~~ 259 (897)
..+..+..++. |+.|+|++|.+..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 77788888887 4899999999873
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=1.1e-19 Score=194.34 Aligned_cols=192 Identities=27% Similarity=0.327 Sum_probs=117.0
Q ss_pred cccccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEE
Q 045539 171 LPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDL 250 (897)
Q Consensus 171 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 250 (897)
+.++..+.+..+.+++..+ +..+++|++|++++|.++ .++. ...+++|++|+|++|++++..+ +..+++|++|
T Consensus 23 l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~~--~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L 95 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWL 95 (291)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HHHHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cChh--HhcCCCCCEEEccCCccCCCcc--cccCCCCCEE
Confidence 3445555566666655433 346666777777777666 3433 2346666667777666665443 6667777777
Q ss_pred EccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCC
Q 045539 251 ELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGN 330 (897)
Q Consensus 251 ~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~ 330 (897)
++++|.+++.. .+..+++|++|++++|+++++
T Consensus 96 ~l~~n~l~~~~-----------------------~l~~l~~L~~L~L~~n~i~~~------------------------- 127 (291)
T 1h6t_A 96 FLDENKVKDLS-----------------------SLKDLKKLKSLSLEHNGISDI------------------------- 127 (291)
T ss_dssp ECCSSCCCCGG-----------------------GGTTCTTCCEEECTTSCCCCC-------------------------
T ss_pred ECCCCcCCCCh-----------------------hhccCCCCCEEECCCCcCCCC-------------------------
Confidence 77777665421 135566677777777766532
Q ss_pred cCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccc
Q 045539 331 IPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNL 410 (897)
Q Consensus 331 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 410 (897)
..+..+++|++|++++|++++. ..+..+++|+.|+|++|++++..+ +..+++|++|++++|++++ +| .+..+
T Consensus 128 --~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l 199 (291)
T 1h6t_A 128 --NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGL 199 (291)
T ss_dssp --GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTC
T ss_pred --hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccC
Confidence 1244566677777777776664 456666666666666666665443 6666666666666666663 33 26666
Q ss_pred cccceeccccccccC
Q 045539 411 TSLRVLYLGLNRFTS 425 (897)
Q Consensus 411 ~~L~~L~L~~N~l~~ 425 (897)
++|+.|++++|+++.
T Consensus 200 ~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 200 KNLDVLELFSQECLN 214 (291)
T ss_dssp TTCSEEEEEEEEEEC
T ss_pred CCCCEEECcCCcccC
Confidence 666666666666654
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=2.6e-21 Score=225.36 Aligned_cols=104 Identities=24% Similarity=0.252 Sum_probs=64.3
Q ss_pred ccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCC-Cccccccccc
Q 045539 335 VGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSI-PSCLGNLTSL 413 (897)
Q Consensus 335 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L 413 (897)
|+.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .++.+++|++|+|++|+|++.. |..++++++|
T Consensus 459 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L 535 (567)
T 1dce_A 459 LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRL 535 (567)
T ss_dssp GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCC
Confidence 455566666666666666 355666666666666666666664 44 5666666666666666666554 6666667777
Q ss_pred ceeccccccccCCcccc---ccccccceEEe
Q 045539 414 RVLYLGLNRFTSALPST---IWNLKDILFID 441 (897)
Q Consensus 414 ~~L~L~~N~l~~~~p~~---~~~l~~L~~L~ 441 (897)
+.|+|++|++++.+|.. +..+++|+.|+
T Consensus 536 ~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 536 VLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp CEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 77777777766544321 22355666553
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.1e-19 Score=200.87 Aligned_cols=176 Identities=25% Similarity=0.259 Sum_probs=128.7
Q ss_pred cEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhh-cccccccccccccccccCCCcccccccccceecccc
Q 045539 342 LVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELC-HLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGL 420 (897)
Q Consensus 342 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 420 (897)
+.+++++|+++. +|..+. +.++.|+|++|+|++..+..|. .+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 577888888876 454443 3477788888888877677676 788888888888888876667788888888888888
Q ss_pred ccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCC---CCcCC
Q 045539 421 NRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESF---GDLSS 497 (897)
Q Consensus 421 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~---~~l~~ 497 (897)
|++++..+..|..+++|++ |+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++
T Consensus 98 N~l~~~~~~~~~~l~~L~~-------------L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~ 164 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEV-------------LLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPK 164 (361)
T ss_dssp SCCCEECTTTTTTCTTCCE-------------EECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTT
T ss_pred CcCCcCCHHHhCCCcCCCE-------------EECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCc
Confidence 8888766667777777774 4444445555567778888888888888888885433334 56888
Q ss_pred CcEEeccCCccCCCCchhhhhhccc--ceEeccCCccc
Q 045539 498 LEVLDLSKNKISGAIPASLQKLLYL--KHLNLSFNKLE 533 (897)
Q Consensus 498 L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~ls~N~l~ 533 (897)
|+.|||++|+|++..+..+..++.+ +.|+|++|++.
T Consensus 165 L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 165 LMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 9999999999986666777777763 77787777775
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=1.8e-19 Score=184.08 Aligned_cols=153 Identities=24% Similarity=0.321 Sum_probs=87.4
Q ss_pred cEEEccCCCCCCCccccccCccchhhhcccCcccccccc-hhhhcccccccccccccccccCCCcccccccccceecccc
Q 045539 342 LVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPIT-DELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGL 420 (897)
Q Consensus 342 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 420 (897)
+.+++++|.+++ +|..+. ..+++|+|++|++++..+ ..|..+++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 477777777776 444432 234566666666665433 3355555555666665555554444555555555555555
Q ss_pred ccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcE
Q 045539 421 NRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEV 500 (897)
Q Consensus 421 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 500 (897)
|++++.. |..|+.+++|++|+|++|+|++..|..|.++++|++
T Consensus 91 N~l~~~~-------------------------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 133 (220)
T 2v70_A 91 NRLENVQ-------------------------------------HKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRL 133 (220)
T ss_dssp SCCCCCC-------------------------------------GGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSE
T ss_pred CccCccC-------------------------------------HhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCE
Confidence 5555444 444455555555555555555555555666666666
Q ss_pred EeccCCccCCCCchhhhhhcccceEeccCCcccc
Q 045539 501 LDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEG 534 (897)
Q Consensus 501 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 534 (897)
|+|++|+|++..|..|..+++|+.|+|++|++.+
T Consensus 134 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 134 LSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp EECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred EECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 6666666665555566666666666666665554
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=3.2e-19 Score=208.87 Aligned_cols=192 Identities=22% Similarity=0.272 Sum_probs=159.3
Q ss_pred HHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhccccccccccc
Q 045539 316 SLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQ 395 (897)
Q Consensus 316 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 395 (897)
.+..+.+..+.+++..+ +..+++|+.|++++|.++.+ + .+..+++|+.|+|++|++++..+ +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 56677777787776554 56789999999999999874 3 58899999999999999997655 8899999999999
Q ss_pred ccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccc
Q 045539 396 GNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQ 475 (897)
Q Consensus 396 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~ 475 (897)
+|++++ +| .+..+++|+.|+|++|++++. ..+..+++|+.|++++| ++++. ..++.+++|+
T Consensus 96 ~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N-------------~l~~l--~~l~~l~~L~ 156 (605)
T 1m9s_A 96 ENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNN-------------KITDI--TVLSRLTKLD 156 (605)
T ss_dssp SSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSS-------------CCCCC--GGGGSCTTCS
T ss_pred CCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCC-------------ccCCc--hhhcccCCCC
Confidence 999985 44 789999999999999999863 45778888885555554 44443 5688899999
Q ss_pred cccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcccccC
Q 045539 476 QMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEI 536 (897)
Q Consensus 476 ~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 536 (897)
.|+|++|+|++..| +..+++|+.|+|++|+|++ + ..+..+++|+.|+|++|++++..
T Consensus 157 ~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 157 TLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-L-RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-C-GGGTTCTTCSEEECCSEEEECCC
T ss_pred EEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-C-hHHccCCCCCEEEccCCcCcCCc
Confidence 99999999997666 9999999999999999985 4 46899999999999999998753
No 366
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=4.1e-19 Score=181.44 Aligned_cols=153 Identities=19% Similarity=0.193 Sum_probs=141.0
Q ss_pred ceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccc
Q 045539 103 QTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATN 182 (897)
Q Consensus 103 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N 182 (897)
+.+++++|+++ .+|..+. ++|++|+|++|+|.+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57899999998 6787766 78999999999999999999999999999999999999888999999999999999999
Q ss_pred cccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEcccccccc
Q 045539 183 NLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSG 259 (897)
Q Consensus 183 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 259 (897)
+|+.+.+..|.++++|++|+|++|+++ .++...+..+++|++|+|++|.+++..+..|..+++|+.|+|++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCC-EeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 999998888999999999999999999 4555556689999999999999999888899999999999999999864
No 367
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=5e-19 Score=180.76 Aligned_cols=156 Identities=22% Similarity=0.280 Sum_probs=126.4
Q ss_pred HHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCcc-ccccCccchhhhcccCcccccccchhhhcccccccccccc
Q 045539 318 EIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIP-ITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQG 396 (897)
Q Consensus 318 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 396 (897)
+.+++++|.++. +|..+. ..+++|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 367889999985 565553 467899999999998755 5689999999999999999988888999999999999999
Q ss_pred cccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCccccc
Q 045539 397 NKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQ 476 (897)
Q Consensus 397 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~ 476 (897)
|++++..|..|.++++|+.|+|++|++++..|.. |..+++|++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-------------------------------------~~~l~~L~~ 133 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDS-------------------------------------FIGLSSVRL 133 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTS-------------------------------------STTCTTCSE
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhH-------------------------------------cCCCccCCE
Confidence 9999888888999999998888888887654444 445566666
Q ss_pred ccccCceecccCCCCCCCcCCCcEEeccCCccCCCCc
Q 045539 477 MFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIP 513 (897)
Q Consensus 477 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 513 (897)
|+|++|+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 134 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 134 LSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp EECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred EECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 6677777776667777778888888888888776544
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.3e-19 Score=217.62 Aligned_cols=208 Identities=20% Similarity=0.181 Sum_probs=125.6
Q ss_pred CcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhccc
Q 045539 292 LKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLT 371 (897)
Q Consensus 292 L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 371 (897)
|+.++|+.|.|. .+.+..|.+. ..++.+..+++|+.|+|++|.++. +|..+.++++|++|+|+
T Consensus 193 l~~l~Ls~~~i~---------------~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~~l~~L~~L~Ls 255 (727)
T 4b8c_D 193 LQHKKLSQYSID---------------EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIFN-ISANIFKYDFLTRLYLN 255 (727)
T ss_dssp ---------------------------------------------CCCCCCEEECTTSCCSC-CCGGGGGCCSCSCCBCT
T ss_pred hhcCccCccccc---------------Ccccccccee-cChhhhccCCCCcEEECCCCCCCC-CChhhcCCCCCCEEEee
Confidence 455666666544 3344455555 668889999999999999999995 66667799999999999
Q ss_pred CcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccc
Q 045539 372 RNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLI 451 (897)
Q Consensus 372 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~ 451 (897)
+|+|+ .+|..|+.+++|++|+|++|+|+ .+|..|+++++|++|+|++|.|+ .+|..|+++++|+
T Consensus 256 ~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~------------- 319 (727)
T 4b8c_D 256 GNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQ------------- 319 (727)
T ss_dssp TSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCC-------------
T ss_pred CCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCcc-------------
Confidence 99999 88999999999999999999999 78999999999999999999998 6788899998888
Q ss_pred eeecccCcCCCCCcccccCCcc-cccccccCceecccCCCCCCCcCCCcEEeccCC--------ccCCCCchhhhhhccc
Q 045539 452 GLNFSRNNLSGDIPITIGGLKN-LQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKN--------KISGAIPASLQKLLYL 522 (897)
Q Consensus 452 ~l~ls~n~l~~~~p~~~~~l~~-L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L 522 (897)
.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|.. |+.|++++| .|.+..+..+..+..+
T Consensus 320 ~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~ 393 (727)
T 4b8c_D 320 FLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKR 393 (727)
T ss_dssp CEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------------------
T ss_pred EEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhccccc
Confidence 6666777777888888766533 345889999999988864 566777777 4555556666777778
Q ss_pred ceEeccCCcccccCCC
Q 045539 523 KHLNLSFNKLEGEIPR 538 (897)
Q Consensus 523 ~~L~ls~N~l~~~~p~ 538 (897)
....+++|-+.+....
T Consensus 394 ~~~~ls~Nil~~~~~~ 409 (727)
T 4b8c_D 394 TFTVLSYNTLCQHYAT 409 (727)
T ss_dssp --------CCCGGGCC
T ss_pred ceeeeeccccccccCc
Confidence 8889999988765443
No 369
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=1.1e-18 Score=179.35 Aligned_cols=153 Identities=23% Similarity=0.292 Sum_probs=84.6
Q ss_pred CcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceecccc
Q 045539 341 LLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGL 420 (897)
Q Consensus 341 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 420 (897)
-+.+++++++++. +|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 4567777777765 443332 5566666666666665566666666666666666666544444455566666666666
Q ss_pred ccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcE
Q 045539 421 NRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEV 500 (897)
Q Consensus 421 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 500 (897)
|++++..+..|. .+++|++|+|++|+|+ .+|..+..+++|++
T Consensus 98 N~l~~l~~~~~~-------------------------------------~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~ 139 (229)
T 3e6j_A 98 NQLTVLPSAVFD-------------------------------------RLVHLKELFMCCNKLT-ELPRGIERLTHLTH 139 (229)
T ss_dssp SCCCCCCTTTTT-------------------------------------TCTTCCEEECCSSCCC-SCCTTGGGCTTCSE
T ss_pred CcCCccChhHhC-------------------------------------cchhhCeEeccCCccc-ccCcccccCCCCCE
Confidence 655544444444 4444445555555554 34555555555555
Q ss_pred EeccCCccCCCCchhhhhhcccceEeccCCcccc
Q 045539 501 LDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEG 534 (897)
Q Consensus 501 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 534 (897)
|+|++|+|++..+..+..+++|+.|+|++|++.+
T Consensus 140 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 140 LALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred EECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 5555555554434445555555555555555443
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1e-18 Score=183.65 Aligned_cols=171 Identities=20% Similarity=0.291 Sum_probs=107.3
Q ss_pred CcccccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccE
Q 045539 170 NLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSD 249 (897)
Q Consensus 170 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 249 (897)
++.++..+++++|.++++. .+..+++|++|++++|+++ .+| . ...+++|++|+|++|++++..+ +.++++|++
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~-l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-G-MQFFTNLKELHLSHNQISDLSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-T-GGGCTTCCEEECCSSCCCCCGG--GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-H-HhhCCCCCEEECCCCccCCChh--hccCCCCCE
Confidence 4566666677777766654 4666777777777777776 455 2 2356666666776666665443 666677777
Q ss_pred EEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCC
Q 045539 250 LELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISG 329 (897)
Q Consensus 250 L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~ 329 (897)
|+|++|++++..+ +.. ++|++|+|++|+++++
T Consensus 90 L~L~~N~l~~l~~-----------------------~~~-~~L~~L~L~~N~l~~~------------------------ 121 (263)
T 1xeu_A 90 LSVNRNRLKNLNG-----------------------IPS-ACLSRLFLDNNELRDT------------------------ 121 (263)
T ss_dssp EECCSSCCSCCTT-----------------------CCC-SSCCEEECCSSCCSBS------------------------
T ss_pred EECCCCccCCcCc-----------------------ccc-CcccEEEccCCccCCC------------------------
Confidence 7777776665322 112 5666666666666532
Q ss_pred CcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccC
Q 045539 330 NIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGS 402 (897)
Q Consensus 330 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 402 (897)
..+..+++|++|++++|++++. + .+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 122 ---~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 122 ---DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp ---GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ---hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 1255666777777777777664 2 466667777777777777654 5566666777777777776644
No 371
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=7.8e-19 Score=184.01 Aligned_cols=137 Identities=20% Similarity=0.254 Sum_probs=107.7
Q ss_pred CCCcCCeeecccceEEEEEEe-cCCce--EEEEEechhhH------------------------HHHHHHHHHHHHHHhc
Q 045539 618 RFSENNLIGIGSFGSIYVARL-QDGME--VAVKVFHQQYE------------------------RALKSFEDECEVMKRI 670 (897)
Q Consensus 618 ~y~~~~~lg~G~~g~Vy~a~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~E~~~l~~l 670 (897)
-|.+.+.||+|+||.||+|.+ .+|+. ||||+++.... .....+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 366789999999999999988 67999 99998754311 1124678999999999
Q ss_pred CCCcc--ceEeeeecCCCceEEEEEeccC-C----ChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCcEeCC
Q 045539 671 RHRNL--VKIISSCSNDDFKALIMKYMPN-G----SLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGH-STPIIHCD 742 (897)
Q Consensus 671 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h-~~~ivH~D 742 (897)
.|+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.|++|| | +.||+|||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~l---H~~~givHrD 196 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRL---YQEAELVHAD 196 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHH---HHTSCEECSS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHH---HHHCCEEeCC
Confidence 88754 444443 356899999942 3 67665432 22446778999999999999 7 99999999
Q ss_pred CCCCCeeeCCCCcEEEeeccCcccc
Q 045539 743 LKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 743 lkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=1.8e-18 Score=173.47 Aligned_cols=155 Identities=16% Similarity=0.193 Sum_probs=126.5
Q ss_pred CCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccc
Q 045539 96 LGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLA 175 (897)
Q Consensus 96 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~ 175 (897)
.+.+++|++|++++|.++ .+| .+..+++|++|++++|.+.. +..+..+++|++|++++|++++..|..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356788889999999888 666 68888999999999986643 34788888999999999999877888899999999
Q ss_pred cccccccccccccccccccccccccccccccc-ccccCCccccccccccceeecccccccccccccccCCCcccEEEccc
Q 045539 176 RLAFATNNLVGVAPVTIFNMSALKEIYLLNNS-LSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGV 254 (897)
Q Consensus 176 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 254 (897)
+|++++|++++..|..+.++++|++|+|++|+ ++ .+| .+..+++|++|++++|.+++. + .+..+++|++|++++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~--~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM--PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG--GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECB
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH--hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeC
Confidence 99999999998888888999999999999998 54 666 244788999999999999763 3 788999999999999
Q ss_pred ccccc
Q 045539 255 NLFSG 259 (897)
Q Consensus 255 N~l~~ 259 (897)
|+|.+
T Consensus 191 N~i~~ 195 (197)
T 4ezg_A 191 QTIGG 195 (197)
T ss_dssp C----
T ss_pred cccCC
Confidence 98764
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=2.7e-18 Score=172.26 Aligned_cols=105 Identities=18% Similarity=0.280 Sum_probs=72.9
Q ss_pred cccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCccccccccc
Q 045539 334 VVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSL 413 (897)
Q Consensus 334 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 413 (897)
..+.+++|+.|++++|.++. +| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..|..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 34677888888888888885 44 57777888888888886652 3366677777777777777776666777777777
Q ss_pred ceeccccccccCCccccccccccceEEee
Q 045539 414 RVLYLGLNRFTSALPSTIWNLKDILFIDV 442 (897)
Q Consensus 414 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 442 (897)
++|++++|++++..|..+..+++|++|++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 77777777776655555555555553333
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=3.9e-18 Score=179.24 Aligned_cols=168 Identities=17% Similarity=0.265 Sum_probs=117.2
Q ss_pred HHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhccccccccccc
Q 045539 316 SLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQ 395 (897)
Q Consensus 316 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 395 (897)
.+..+++++|.+++.. .+..+++|++|++++|+++.+ + .+..+++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 6778888888887544 578889999999999999874 4 67888888888888888886544 7888888888888
Q ss_pred ccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccc
Q 045539 396 GNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQ 475 (897)
Q Consensus 396 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~ 475 (897)
+|++++ +|... . ++|+.|++++|++++. + .+..+++|++|++++|+ +++. | .++.+++|+
T Consensus 94 ~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~-------------i~~~-~-~l~~l~~L~ 153 (263)
T 1xeu_A 94 RNRLKN-LNGIP-S-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNK-------------LKSI-V-MLGFLSKLE 153 (263)
T ss_dssp SSCCSC-CTTCC-C-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSC-------------CCBC-G-GGGGCTTCC
T ss_pred CCccCC-cCccc-c-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCc-------------CCCC-h-HHccCCCCC
Confidence 888874 44322 2 7788888888877753 2 46666666644444333 3322 2 456666777
Q ss_pred cccccCceecccCCCCCCCcCCCcEEeccCCccCCC
Q 045539 476 QMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGA 511 (897)
Q Consensus 476 ~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 511 (897)
.|++++|++++. ..+..+++|+.|++++|++++.
T Consensus 154 ~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 154 VLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp EEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred EEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 777777777654 5566666677777777766643
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=8.2e-19 Score=191.27 Aligned_cols=101 Identities=21% Similarity=0.160 Sum_probs=64.2
Q ss_pred ccCCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccc-cccccccccccCCCccccccccccee
Q 045539 338 LGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLH-SLVLQGNKFSGSIPSCLGNLTSLRVL 416 (897)
Q Consensus 338 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L 416 (897)
+++|+.|+|++|+++.+.+..|.++++|+.|+|.+| ++...+.+|.++++|+ .+++.+ +++...+.+|.++++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 566777777777776666666677777777777666 5555555666666666 666666 5554445666666666666
Q ss_pred ccccccccCCccccccccccceEE
Q 045539 417 YLGLNRFTSALPSTIWNLKDILFI 440 (897)
Q Consensus 417 ~L~~N~l~~~~p~~~~~l~~L~~L 440 (897)
+++.|+++...+..|.++++|+.+
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEE
T ss_pred EeCCCccCccchhhhcCCcchhhh
Confidence 666666665555556666555544
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=1.7e-17 Score=165.53 Aligned_cols=131 Identities=19% Similarity=0.180 Sum_probs=116.1
Q ss_pred EEeecccccccCCCCCCCCCCCceecccCccccCcCCc-cccCCCCCcEEeccCccccCCccccccccccccEEEeeecC
Q 045539 81 LNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPS-SIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSING 159 (897)
Q Consensus 81 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~ 159 (897)
+++++++++ .+|..+.. +|++|+|++|+|++..+. .|+++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 13 l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 13 VDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp EECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 445566674 68877654 999999999999976664 48999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCCc
Q 045539 160 LSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPS 214 (897)
Q Consensus 160 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 214 (897)
|++..|..|.++++|++|+|++|+++++.|..|..+++|++|+|++|.+++..+.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 9988888899999999999999999999999999999999999999999876553
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=5.6e-18 Score=169.00 Aligned_cols=130 Identities=24% Similarity=0.297 Sum_probs=59.4
Q ss_pred hhhcccCcccccccchhhhcccccccccccccccccCCCc-ccccccccceeccccccccCCccccccccccceEEeecC
Q 045539 366 QALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPS-CLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSS 444 (897)
Q Consensus 366 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 444 (897)
+.+++++|+++ .+|..+. .+|++|++++|+|++..+. .|+++++|++|+|++|++++..|..|.++++|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~------ 81 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQ------ 81 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCC------
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCC------
Confidence 44555555554 3333332 1455555555555533332 244555555555555555544444444444444
Q ss_pred CcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCC
Q 045539 445 NSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGA 511 (897)
Q Consensus 445 N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 511 (897)
.|+|++|+|++..|..|+.+++|++|+|++|+|++.+|..|..+++|++|+|++|.+++.
T Consensus 82 -------~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 82 -------ELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp -------EEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred -------EEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 222233333333344444444444444444444444444444444444444444444443
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=2.5e-18 Score=187.46 Aligned_cols=289 Identities=13% Similarity=0.097 Sum_probs=173.4
Q ss_pred ccCCCCCCC--CCCCceecccCccccCcCCccccC-CCCCcEEeccCcccc--CCccccccccccccEEEeeecCCCCCC
Q 045539 90 GTIPPQLGN--LSSLQTLDLSHNKLSGNIPSSIFN-MHTLKLLYFSDNQLF--GSLSFFIFNVSSVTTIDLSINGLSGEM 164 (897)
Q Consensus 90 g~~~~~l~~--l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~LdLs~N~l~~~~ 164 (897)
|+++..+.. +.+++.|.++++ +.+.--..+.. +++|++|||++|++. ...+..+ +.+..+++..|.+.
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I~--- 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFVP--- 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEEC---
T ss_pred CcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---cccccccccccccC---
Confidence 344444443 677888888764 22111122333 677888888888776 2222222 22445555555322
Q ss_pred CccccC--------cccccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccc---
Q 045539 165 PREIGN--------LPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSF--- 233 (897)
Q Consensus 165 p~~l~~--------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l--- 233 (897)
+..|.+ +++|+.|+|.+ .++.+.+.+|.+|++|++|++++|.++ .++...|....++..+.++.+..
T Consensus 86 ~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~~ 163 (329)
T 3sb4_A 86 AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYRF 163 (329)
T ss_dssp TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHHT
T ss_pred HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhhc
Confidence 234555 77777777777 777777777777777777777777776 66666666666666555554321
Q ss_pred -cccccccccCCCccc-EEEccccccccccCcccc-------ccccccccCCCCcccccccc-cccCCCcEEEecCCCCC
Q 045539 234 -YGTVPSSITNASKLS-DLELGVNLFSGFIPNTFV-------NMADNYLTSSTPELSFLSSL-TNCKKLKVLILTGNPLD 303 (897)
Q Consensus 234 -~~~~p~~l~~l~~L~-~L~L~~N~l~~~~~~~f~-------~l~~~~l~~~~~~~~~l~~l-~~l~~L~~L~Ls~N~l~ 303 (897)
.......|.++..|+ .+.+....- ++..+. ++....+...... .....+ ..+++|+.++|++|+++
T Consensus 164 ~~~i~~~~f~~~~~L~~~i~~~~~~~---l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~ 239 (329)
T 3sb4_A 164 KNRWEHFAFIEGEPLETTIQVGAMGK---LEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNAT 239 (329)
T ss_dssp STTTTTSCEEESCCCEEEEEECTTCC---HHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCC
T ss_pred cccccccccccccccceeEEecCCCc---HHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcc
Confidence 112233344444544 333322110 000000 0000000000000 000000 12556666666665554
Q ss_pred CCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchh-hhcccCcccccccchh
Q 045539 304 GILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQ-ALGLTRNKLAGPITDE 382 (897)
Q Consensus 304 ~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~ 382 (897)
.+.+.+|.++++|+.|+|.+| ++.+.+.+|.++++|+ .+++.+ +++...+.+
T Consensus 240 -------------------------~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~a 292 (329)
T 3sb4_A 240 -------------------------TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGA 292 (329)
T ss_dssp -------------------------EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTT
T ss_pred -------------------------eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhh
Confidence 345567888999999999998 8888888999999999 999998 787777889
Q ss_pred hhcccccccccccccccccCCCcccccccccceecc
Q 045539 383 LCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYL 418 (897)
Q Consensus 383 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 418 (897)
|.++++|+.|++++|+++...+.+|.++++|+.++.
T Consensus 293 F~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 293 FMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp TTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred hhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999999999999999999777789999999998874
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=9e-17 Score=158.09 Aligned_cols=135 Identities=27% Similarity=0.312 Sum_probs=110.6
Q ss_pred cceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCcccc
Q 045539 64 CSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFF 143 (897)
Q Consensus 64 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 143 (897)
|+|.+|.|+.. +++ .+|..+ .++|++|+|++|++++..+..|+++++|++|+|++|++.+..+..
T Consensus 7 C~~~~l~~~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 7 CSGTEIRCNSK------------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EETTEEECCSS------------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred eCCCEEEecCC------------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 78998888642 344 455444 378999999999999777777899999999999999998888888
Q ss_pred ccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccccccccccccccccCC
Q 045539 144 IFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLP 213 (897)
Q Consensus 144 ~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 213 (897)
+.++++|++|+|++|++++..+..|..+++|++|+|++|+++++.+..+.++++|++|+|++|.+++..|
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8899999999999999997666678888888888888888888877777888888888888888875433
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=8.5e-17 Score=156.79 Aligned_cols=108 Identities=20% Similarity=0.306 Sum_probs=52.8
Q ss_pred CCCceecccCcccc-CcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccc
Q 045539 100 SSLQTLDLSHNKLS-GNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLA 178 (897)
Q Consensus 100 ~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ 178 (897)
++|++|+|++|.++ +.+|..+..+++|++|+|++|++.+. ..+..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 44454455555555555555554443 4444455555555555555544444444445555555
Q ss_pred ccccccccccc-cccccccccccccccccccc
Q 045539 179 FATNNLVGVAP-VTIFNMSALKEIYLLNNSLS 209 (897)
Q Consensus 179 L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 209 (897)
|++|+++++.+ ..+.++++|++|++++|.++
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~ 133 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVT 133 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCc
Confidence 55555444321 34444444444444444444
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=6.8e-17 Score=157.47 Aligned_cols=136 Identities=20% Similarity=0.254 Sum_probs=124.2
Q ss_pred CeEEEEEeeccccc-ccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEE
Q 045539 76 HRVIGLNISSFNLQ-GTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTID 154 (897)
Q Consensus 76 ~~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ld 154 (897)
.++..|++++|+++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|++.+.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56889999999998 89999999999999999999999965 7899999999999999999998899999999999999
Q ss_pred eeecCCCCCCC--ccccCccccccccccccccccccc---ccccccccccccccccccccccCCcc
Q 045539 155 LSINGLSGEMP--REIGNLPYLARLAFATNNLVGVAP---VTIFNMSALKEIYLLNNSLSGSLPSR 215 (897)
Q Consensus 155 Ls~N~l~~~~p--~~l~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~p~~ 215 (897)
|++|++++ +| ..++.+++|++|++++|++++..+ ..+..+++|++|++++|.+. ++|..
T Consensus 102 Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp CBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred ccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 99999995 44 789999999999999999999876 57899999999999999987 55543
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=1.1e-16 Score=152.52 Aligned_cols=108 Identities=19% Similarity=0.258 Sum_probs=63.1
Q ss_pred CCCceecccCcccc-CcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccc
Q 045539 100 SSLQTLDLSHNKLS-GNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLA 178 (897)
Q Consensus 100 ~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ 178 (897)
++|++|++++|.++ +.+|..+..+++|++|++++|++.+. ..+..+++|++|+|++|++++.+|..++.+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55666666666665 55565566666666666666666544 4555566666666666666554555555556666666
Q ss_pred ccccccccc-cccccccccccccccccccccc
Q 045539 179 FATNNLVGV-APVTIFNMSALKEIYLLNNSLS 209 (897)
Q Consensus 179 L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~ 209 (897)
+++|+++++ .+..+.++++|++|++++|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 666665554 2345555555555555555555
No 383
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=1.1e-16 Score=173.66 Aligned_cols=138 Identities=17% Similarity=0.206 Sum_probs=101.4
Q ss_pred cCCCcCCeeecccceEEEEEEecCCceEEEEEechhhH----------------------HHHHHHHHHHHHHHhcCCCc
Q 045539 617 DRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYE----------------------RALKSFEDECEVMKRIRHRN 674 (897)
Q Consensus 617 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~n 674 (897)
.-|++.+.||+|++|.||+|...+|+.||||+++.... .......+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34899999999999999999999999999998753210 00111235666666665443
Q ss_pred cc--eEeeeecCCCceEEEEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCC
Q 045539 675 LV--KIISSCSNDDFKALIMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDE 752 (897)
Q Consensus 675 iv--~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~ 752 (897)
+. ..+++ ...++||||++|++|.++... .....++.|++.++.+| |+.|||||||||.|||+++
T Consensus 175 v~vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~l---H~~gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRL---AKHGLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEEEE
T ss_pred CCCCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEEEeC
Confidence 32 22222 123799999999998765322 23456889999999999 7889999999999999987
Q ss_pred CC----------cEEEeeccCccccC
Q 045539 753 DM----------VAHISDFGIAKLLS 768 (897)
Q Consensus 753 ~~----------~~kL~DFg~a~~~~ 768 (897)
++ .+.|+||+-+....
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCcccccccccceEEEEeCCcccCC
Confidence 76 48999999876544
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=5.8e-16 Score=154.32 Aligned_cols=125 Identities=24% Similarity=0.294 Sum_probs=105.0
Q ss_pred EEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCC
Q 045539 81 LNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGL 160 (897)
Q Consensus 81 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l 160 (897)
+++++++++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 445566666 5776654 68999999999998 7888899999999999999999888888899999999999999999
Q ss_pred CCCCCccccCccccccccccccccccccccccccccccccccccccccc
Q 045539 161 SGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLS 209 (897)
Q Consensus 161 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 209 (897)
++..|..|..+++|++|+|++|+|+.+.+..|.++++|+.|+|++|.+.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 8777778888888888888888888887777888888888888888776
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=1.2e-16 Score=152.27 Aligned_cols=128 Identities=17% Similarity=0.187 Sum_probs=117.4
Q ss_pred CeEEEEEeeccccc-ccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEE
Q 045539 76 HRVIGLNISSFNLQ-GTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTID 154 (897)
Q Consensus 76 ~~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ld 154 (897)
.++..|++++++++ +.+|..++.+++|++|+|++|.+++. ..++++++|++|+|++|++.+.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46889999999998 89999999999999999999999965 7899999999999999999998999999999999999
Q ss_pred eeecCCCCC-CCccccCccccccccccccccccccc---cccccccccccccccc
Q 045539 155 LSINGLSGE-MPREIGNLPYLARLAFATNNLVGVAP---VTIFNMSALKEIYLLN 205 (897)
Q Consensus 155 Ls~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~ 205 (897)
+++|++++. .|..++.+++|++|++++|++++..+ ..+..+++|++|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999963 34889999999999999999999877 6789999999999874
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=151.85 Aligned_cols=128 Identities=27% Similarity=0.390 Sum_probs=96.6
Q ss_pred ccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCccccc
Q 045539 390 HSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIG 469 (897)
Q Consensus 390 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~ 469 (897)
+.+++++|+++ .+|..+. ++|+.|++++|.++ .+|..|.++++|+ .|+|++|+|++..|..|.
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~-------------~L~Ls~N~i~~i~~~~f~ 75 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLT-------------LIDLSNNRISTLSNQSFS 75 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCC-------------EEECCSSCCCCCCTTTTT
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCC-------------EEECCCCcCCEeCHhHcc
Confidence 45777777777 5665543 46788888888887 4667777777776 444555555556667788
Q ss_pred CCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcccc
Q 045539 470 GLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEG 534 (897)
Q Consensus 470 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 534 (897)
++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++.+
T Consensus 76 ~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 76 NMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp TCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 88888888888888888777788888888888888888886555678888888888888888764
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=1.8e-15 Score=148.68 Aligned_cols=132 Identities=20% Similarity=0.277 Sum_probs=78.5
Q ss_pred ccccccccccccCCCcccccccccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCCCCCccccc
Q 045539 390 HSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIG 469 (897)
Q Consensus 390 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~ 469 (897)
+.+++++|+++ .+|..+. ++|+.|++++|++++..+..+..+++|+ .|++++|++++..+..++
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~-------------~L~l~~n~l~~~~~~~~~ 73 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLT-------------KLSLSQNQIQSLPDGVFD 73 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCS-------------EEECCSSCCCCCCTTTTT
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCccccc-------------EEECCCCcceEeChhHcc
Confidence 44555555555 3443332 4566666666666654444555555555 333333344434444556
Q ss_pred CCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCcccccCC
Q 045539 470 GLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLEGEIP 537 (897)
Q Consensus 470 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 537 (897)
.+++|++|++++|+|++..+..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|++++..|
T Consensus 74 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 74 KLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 66777777777777776555566777777777777777775544455667777777777777665443
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=2.2e-17 Score=165.74 Aligned_cols=155 Identities=18% Similarity=0.230 Sum_probs=109.8
Q ss_pred CCCCCCceecccCccccCcCCc------cccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccC
Q 045539 97 GNLSSLQTLDLSHNKLSGNIPS------SIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGN 170 (897)
Q Consensus 97 ~~l~~L~~L~Ls~n~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~ 170 (897)
.....++.++++.+.++|.+|. .|+++++|++|+|++|++.+ +| .+.++++|++|+|++|+++ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3455666777777777766665 67777777777777777766 44 6777777777777777777 56777777
Q ss_pred cccccccccccccccccccccccccccccccccccccccccCCc-cccccccccceeeccccccccccccc---------
Q 045539 171 LPYLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPS-RIDLSLPNVETLNLGINSFYGTVPSS--------- 240 (897)
Q Consensus 171 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~~l~~L~~L~L~~N~l~~~~p~~--------- 240 (897)
+++|++|+|++|+++++ | .+.++++|++|++++|+++ .++. .....+++|++|++++|.+++.+|..
T Consensus 92 ~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 92 ADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred CCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCC-chhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 77777777777777775 3 4777778888888888777 3332 23346778888888888887666653
Q ss_pred -ccCCCcccEEEcccccccc
Q 045539 241 -ITNASKLSDLELGVNLFSG 259 (897)
Q Consensus 241 -l~~l~~L~~L~L~~N~l~~ 259 (897)
+..+++|+.|| +|.++.
T Consensus 169 ~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHCSSCSEEC--CGGGTT
T ss_pred HHHhCCCcEEEC--CcccCH
Confidence 78888999887 666553
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=6.9e-15 Score=163.67 Aligned_cols=113 Identities=12% Similarity=0.104 Sum_probs=60.9
Q ss_pred ccccCccCCcEEEccCCCCC-----CCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCccc
Q 045539 333 QVVGNLGNLLVLELGGNNLT-----EPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCL 407 (897)
Q Consensus 333 ~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 407 (897)
.+|.++++|+.+++.+|.+. .+.+..|.++++|+.++|. +.++.....+|.++++|+.++|..| ++..-+.+|
T Consensus 265 ~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF 342 (401)
T 4fdw_A 265 RAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAF 342 (401)
T ss_dssp TTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSS
T ss_pred hHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhC
Confidence 34555555555555555443 3344555555555555555 3344444555556666666666433 443445556
Q ss_pred ccccccceeccccccccCCccccccccc-cceEEeecCCccc
Q 045539 408 GNLTSLRVLYLGLNRFTSALPSTIWNLK-DILFIDVSSNSLN 448 (897)
Q Consensus 408 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~ 448 (897)
.++ +|+.+++++|.+....+..|.+++ +++.|.+..+.+.
T Consensus 343 ~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 343 NNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 666 666666666665554555555553 4555555555443
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.56 E-value=1.8e-14 Score=160.19 Aligned_cols=269 Identities=11% Similarity=0.118 Sum_probs=138.3
Q ss_pred CCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccccccc
Q 045539 100 SSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAF 179 (897)
Q Consensus 100 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L 179 (897)
..++.+.+.+ .++..-+.+|.++ +|+.+.|.+| +..+....|.++ +|+.+++.. .++..-+..|.++++|+.++|
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4455555542 3443334455553 5666666555 544455555553 466666553 344333445555555555555
Q ss_pred ccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEcccccccc
Q 045539 180 ATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSG 259 (897)
Q Consensus 180 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 259 (897)
.+|+++.+...+|. +++|+++.|.++ ++ .|+...|..+++|+.+++..| ++..-...|.+ ++|+.+.|. |.++.
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~ 261 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTN 261 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccE
Confidence 55555555555554 355555555533 43 455555555555555555543 33333444444 455555552 33333
Q ss_pred ccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCcc
Q 045539 260 FIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLG 339 (897)
Q Consensus 260 ~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~ 339 (897)
+...+ +.++++|+.+++.+|.+.. +.+....+.+|.+++
T Consensus 262 I~~~a---------------------F~~c~~L~~l~l~~~~~~~--------------------~~~~~I~~~aF~~c~ 300 (401)
T 4fdw_A 262 IASRA---------------------FYYCPELAEVTTYGSTFND--------------------DPEAMIHPYCLEGCP 300 (401)
T ss_dssp ECTTT---------------------TTTCTTCCEEEEESSCCCC--------------------CTTCEECTTTTTTCT
T ss_pred EChhH---------------------hhCCCCCCEEEeCCccccC--------------------CcccEECHHHhhCCc
Confidence 33332 2445555555555554431 111123344556666
Q ss_pred CCcEEEccCCCCCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCccccccc-ccceecc
Q 045539 340 NLLVLELGGNNLTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLT-SLRVLYL 418 (897)
Q Consensus 340 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L 418 (897)
+|+.++|. +.++.+...+|.++++|+.+.|..| ++.....+|.++ +|+.+++++|.+....+..|.+++ .++.|++
T Consensus 301 ~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~v 377 (401)
T 4fdw_A 301 KLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRV 377 (401)
T ss_dssp TCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEE
T ss_pred cCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEe
Confidence 66666666 3355555556666666666666433 444445556666 666666666666544445555553 4556666
Q ss_pred ccccc
Q 045539 419 GLNRF 423 (897)
Q Consensus 419 ~~N~l 423 (897)
..+.+
T Consensus 378 p~~~~ 382 (401)
T 4fdw_A 378 PAESV 382 (401)
T ss_dssp CGGGH
T ss_pred CHHHH
Confidence 55544
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=3.8e-17 Score=163.95 Aligned_cols=151 Identities=23% Similarity=0.286 Sum_probs=94.8
Q ss_pred cchhhhcccCcccccccch------hhhcccccccccccccccccCCCcccccccccceeccccccccCCcccccccccc
Q 045539 363 QTLQALGLTRNKLAGPITD------ELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPSTIWNLKD 436 (897)
Q Consensus 363 ~~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 436 (897)
..++.++++.|.+.+.+|. .+..+++|++|+|++|++++ +| .+.++++|+.|++++|+++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3444444444544444443 66667777777777777764 55 6666777777777777776 45666666666
Q ss_pred ceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCC-CCCCCcCCCcEEeccCCccCCCCch-
Q 045539 437 ILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIP-ESFGDLSSLEVLDLSKNKISGAIPA- 514 (897)
Q Consensus 437 L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~- 514 (897)
|++|++++|. +++ +| .++.+++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 95 L~~L~L~~N~-------------l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~ 159 (198)
T 1ds9_A 95 LEELWISYNQ-------------IAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKEN 159 (198)
T ss_dssp CSEEEEEEEE-------------CCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTT
T ss_pred CCEEECcCCc-------------CCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccc
Confidence 6644444433 332 23 46667777777777777774222 3577777888888888887765554
Q ss_pred ---------hhhhhcccceEeccCCccc
Q 045539 515 ---------SLQKLLYLKHLNLSFNKLE 533 (897)
Q Consensus 515 ---------~~~~l~~L~~L~ls~N~l~ 533 (897)
.+..+++|+.|| +|+++
T Consensus 160 ~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 160 NATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp TTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred cchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 277778888776 66654
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=2.6e-15 Score=147.40 Aligned_cols=134 Identities=19% Similarity=0.119 Sum_probs=63.2
Q ss_pred CCCCCCCceecccCccccCcCCccccCCC-CCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccc
Q 045539 96 LGNLSSLQTLDLSHNKLSGNIPSSIFNMH-TLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYL 174 (897)
Q Consensus 96 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L 174 (897)
+.++.+|++|+|++|+++ .+|. +..+. +|++|+|++|++.+. ..+..+++|++|+|++|+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~------------- 77 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC------------- 77 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-------------
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-------------
Confidence 344555555555555555 2332 33332 555555555555432 33444444444444444444
Q ss_pred cccccccccccccccccccccccccccccccccccccCCc-cccccccccceeecccccccccccc----cccCCCcccE
Q 045539 175 ARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPS-RIDLSLPNVETLNLGINSFYGTVPS----SITNASKLSD 249 (897)
Q Consensus 175 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~ 249 (897)
++.+..+.++++|++|+|++|+++ .+|. ..+..+++|++|++++|.++ .+|. .+..+++|+.
T Consensus 78 -----------~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~ 144 (176)
T 1a9n_A 78 -----------RIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRV 144 (176)
T ss_dssp -----------EECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSE
T ss_pred -----------ccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccce
Confidence 433333344444444444444443 3332 11224445555555555554 2333 2556666677
Q ss_pred EEcccccccc
Q 045539 250 LELGVNLFSG 259 (897)
Q Consensus 250 L~L~~N~l~~ 259 (897)
||++.|.+..
T Consensus 145 Ld~~~n~~~~ 154 (176)
T 1a9n_A 145 LDFQKVKLKE 154 (176)
T ss_dssp ETTEECCHHH
T ss_pred eCCCcCCHHH
Confidence 7776666543
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=7.7e-15 Score=143.99 Aligned_cols=133 Identities=20% Similarity=0.205 Sum_probs=83.1
Q ss_pred hhcccccccccccccccccCCCccccccc-ccceeccccccccCCccccccccccceEEeecCCcccccceeecccCcCC
Q 045539 383 LCHLARLHSLVLQGNKFSGSIPSCLGNLT-SLRVLYLGLNRFTSALPSTIWNLKDILFIDVSSNSLNVLIGLNFSRNNLS 461 (897)
Q Consensus 383 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~ 461 (897)
+..+.+|+.|++++|+++ .+|. +..+. +|+.|++++|.+++. ..+..+++|++ |++++|+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~-------------L~Ls~N~l~ 77 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKT-------------LLVNNNRIC 77 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCE-------------EECCSSCCC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCE-------------EECCCCccc
Confidence 334455666666666665 3333 33333 666666666666643 44555555553 333333444
Q ss_pred CCCcccccCCcccccccccCceecccCCC--CCCCcCCCcEEeccCCccCCCCchh----hhhhcccceEeccCCcccc
Q 045539 462 GDIPITIGGLKNLQQMFLEYNRLEGSIPE--SFGDLSSLEVLDLSKNKISGAIPAS----LQKLLYLKHLNLSFNKLEG 534 (897)
Q Consensus 462 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~ls~N~l~~ 534 (897)
+..|..++.+++|++|++++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.||+++|....
T Consensus 78 ~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 78 RIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred ccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 333334467777777777777775 4555 6778888888888888887 56664 7888888888888887653
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=7.1e-14 Score=136.05 Aligned_cols=105 Identities=20% Similarity=0.190 Sum_probs=81.4
Q ss_pred EEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecC
Q 045539 80 GLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSING 159 (897)
Q Consensus 80 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~ 159 (897)
.+++++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|.+..+..|.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 3555666776 4776663 788888888888887778888888888888888888887777777888888888888888
Q ss_pred CCCCCCccccCccccccccccccccccc
Q 045539 160 LSGEMPREIGNLPYLARLAFATNNLVGV 187 (897)
Q Consensus 160 l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 187 (897)
|++..+..|.++++|++|+|++|+++..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 8865555677777777777777777654
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.46 E-value=3.2e-13 Score=150.85 Aligned_cols=153 Identities=8% Similarity=0.034 Sum_probs=74.8
Q ss_pred CCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcc
Q 045539 93 PPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLP 172 (897)
Q Consensus 93 ~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~ 172 (897)
..+|.++++|+.++|.. .++..-..+|.++++|+.++|.++ +.......|.++.+|+.+.+..+ +.......|.+..
T Consensus 64 ~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 34566667777777653 355344456666777777766544 44444555666666665555433 2212233344433
Q ss_pred cccccccccccccccccccccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEc
Q 045539 173 YLARLAFATNNLVGVAPVTIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLEL 252 (897)
Q Consensus 173 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 252 (897)
.+...... .+..+...+|.++++|+.+.+.++. . .++...|..+++|+.+++..| ++......|.+++.|+.+.+
T Consensus 141 ~~~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~-~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~ 215 (394)
T 4fs7_A 141 FKEITIPE--GVTVIGDEAFATCESLEYVSLPDSM-E-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEF 215 (394)
T ss_dssp CSEEECCT--TCCEECTTTTTTCTTCCEEECCTTC-C-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCC
T ss_pred ccccccCc--cccccchhhhcccCCCcEEecCCcc-c-eeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeec
Confidence 32222221 2222334455555555555554432 2 345555555555555555444 33233344444444444444
Q ss_pred c
Q 045539 253 G 253 (897)
Q Consensus 253 ~ 253 (897)
.
T Consensus 216 ~ 216 (394)
T 4fs7_A 216 P 216 (394)
T ss_dssp C
T ss_pred C
Confidence 3
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.44 E-value=5.5e-13 Score=148.89 Aligned_cols=336 Identities=11% Similarity=0.041 Sum_probs=219.8
Q ss_pred cccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccc
Q 045539 111 KLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPV 190 (897)
Q Consensus 111 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 190 (897)
.++..-..+|.++++|+.+.|..+ +..+...+|.++++|+.++|..+ ++..-...|.++++|+.+.+..+ +..+...
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 355455678999999999999854 77777889999999999999865 55344567889999999887754 6777777
Q ss_pred cccccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccccccccCcccccccc
Q 045539 191 TIFNMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTFVNMAD 270 (897)
Q Consensus 191 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~ 270 (897)
+|.++..++........ .+....|..+++|+.+.+.++. .......|.++++|+.+++..| ++.+...+|
T Consensus 135 aF~~~~~~~~~~~~~~~---~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F----- 204 (394)
T 4fs7_A 135 AFKGCDFKEITIPEGVT---VIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCF----- 204 (394)
T ss_dssp TTTTCCCSEEECCTTCC---EECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTT-----
T ss_pred eeecccccccccCcccc---ccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhh-----
Confidence 88887655544443332 4566777788999999998664 4455678899999999999876 444444433
Q ss_pred ccccCCCCcccccccccccCCCcEEEecCCCCCCCCCCcccCchHHHHHHHhccCCCCCCcCccccCccCCcEEEccCCC
Q 045539 271 NYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDGILPKSKGNLSLSLEIILMDNCSISGNIPQVVGNLGNLLVLELGGNN 350 (897)
Q Consensus 271 ~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 350 (897)
.++..|+.+.+..+... +.+.+....+|+.+.+..+
T Consensus 205 ----------------~~~~~L~~i~~~~~~~~---------------------------i~~~~~~~~~l~~i~ip~~- 240 (394)
T 4fs7_A 205 ----------------AECILLENMEFPNSLYY---------------------------LGDFALSKTGVKNIIIPDS- 240 (394)
T ss_dssp ----------------TTCTTCCBCCCCTTCCE---------------------------ECTTTTTTCCCCEEEECTT-
T ss_pred ----------------ccccccceeecCCCceE---------------------------eehhhcccCCCceEEECCC-
Confidence 45566666555544221 1111222345555555432
Q ss_pred CCCCccccccCccchhhhcccCcccccccchhhhcccccccccccccccccCCCcccccccccceeccccccccCCcccc
Q 045539 351 LTEPIPITFSQLQTLQALGLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSLRVLYLGLNRFTSALPST 430 (897)
Q Consensus 351 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 430 (897)
++.+....|.++..|+.+.+..+... .....|.....++.+....+.+. ...|..+.+|+.+.+..+ ++..-..+
T Consensus 241 ~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~a 315 (394)
T 4fs7_A 241 FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEA 315 (394)
T ss_dssp CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTT
T ss_pred ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhh
Confidence 33334455666666666666655433 44455666666666666555432 245666777777777654 55444556
Q ss_pred ccccccceEEeecCCcccccceeecccCcCCCCCcccccCCcccccccccCceecccCCCCCCCcCCCcEEeccCCccCC
Q 045539 431 IWNLKDILFIDVSSNSLNVLIGLNFSRNNLSGDIPITIGGLKNLQQMFLEYNRLEGSIPESFGDLSSLEVLDLSKNKISG 510 (897)
Q Consensus 431 ~~~l~~L~~L~ls~N~l~~l~~l~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 510 (897)
|.++.+|+.+++..+ ++..-..+|.++.+|+.+.+..| ++..-...|.++.+|+.+++..| ++
T Consensus 316 F~~c~~L~~i~lp~~--------------v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~- 378 (394)
T 4fs7_A 316 FESCTSLVSIDLPYL--------------VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE- 378 (394)
T ss_dssp TTTCTTCCEECCCTT--------------CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-
T ss_pred hcCCCCCCEEEeCCc--------------ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-
Confidence 777777775555322 22223456778888888888777 66555678888899999988765 33
Q ss_pred CCchhhhhhcccceE
Q 045539 511 AIPASLQKLLYLKHL 525 (897)
Q Consensus 511 ~~p~~~~~l~~L~~L 525 (897)
.+...|.++++|+.+
T Consensus 379 ~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 379 QYRYDFEDTTKFKWI 393 (394)
T ss_dssp GGGGGBCTTCEEEEE
T ss_pred EhhheecCCCCCcEE
Confidence 445677778777764
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=1.5e-13 Score=134.30 Aligned_cols=106 Identities=22% Similarity=0.253 Sum_probs=84.3
Q ss_pred EEEEeecccccccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeec
Q 045539 79 IGLNISSFNLQGTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSIN 158 (897)
Q Consensus 79 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N 158 (897)
+.+++++++++ .+|..+. ++|++|+|++|+|++..|..|+++++|++|+|++|+|++.++..|.++++|++|||++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 35778888885 6777665 88899999999998888888888999999999998888877777788888888888888
Q ss_pred CCCCCCCccccCccccccccccccccccc
Q 045539 159 GLSGEMPREIGNLPYLARLAFATNNLVGV 187 (897)
Q Consensus 159 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 187 (897)
+|++..+..|..+++|++|+|++|++...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 88855445577777777777777777654
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=2.7e-13 Score=131.93 Aligned_cols=107 Identities=27% Similarity=0.337 Sum_probs=98.6
Q ss_pred CceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCccccccccccc
Q 045539 102 LQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFAT 181 (897)
Q Consensus 102 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~ 181 (897)
.+.|++++|+++ .+|..+. ++|++|+|++|+|.+..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 478999999998 6887774 8999999999999999999999999999999999999977777789999999999999
Q ss_pred cccccccccccccccccccccccccccccc
Q 045539 182 NNLVGVAPVTIFNMSALKEIYLLNNSLSGS 211 (897)
Q Consensus 182 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 211 (897)
|+|+++.+..|.++++|++|+|++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999999988999999999999999999843
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=3.8e-13 Score=131.37 Aligned_cols=104 Identities=19% Similarity=0.278 Sum_probs=97.0
Q ss_pred ceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccc
Q 045539 103 QTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATN 182 (897)
Q Consensus 103 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N 182 (897)
+.+++++|+++ .+|..+. ++|++|+|++|+|.+.+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 7888775 89999999999999999999999999999999999999765666899999999999999
Q ss_pred ccccccccccccccccccccccccccc
Q 045539 183 NLVGVAPVTIFNMSALKEIYLLNNSLS 209 (897)
Q Consensus 183 ~l~~~~~~~~~~l~~L~~L~L~~N~l~ 209 (897)
+|+++.+..|.++++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 999998888999999999999999998
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=8.1e-13 Score=144.93 Aligned_cols=110 Identities=17% Similarity=0.166 Sum_probs=94.3
Q ss_pred cceeeeEeeCCCCeEEEEEeecccccccCCCCCCCCCCCceecccC-ccccCcCCccccCCCCCcEEeccCccccCCccc
Q 045539 64 CSWIGITCDVNSHRVIGLNISSFNLQGTIPPQLGNLSSLQTLDLSH-NKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSF 142 (897)
Q Consensus 64 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 142 (897)
|.|.+|.|+.. |+|+ .+|. |..+++|++|+|++ |.|++..|..|++|++|++|+|++|+|++.+|.
T Consensus 8 C~~~~v~~~~~-----------n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCTRD-----------GALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECCSS-----------CCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcCCC-----------CCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 88888887532 1566 4888 99999999999996 999988888999999999999999999999999
Q ss_pred cccccccccEEEeeecCCCCCCCccccCccccccccccccccccc
Q 045539 143 FIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGV 187 (897)
Q Consensus 143 ~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 187 (897)
.|.++++|++|||++|+|++..+..|..++ |+.|+|++|.+...
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 999999999999999999965555566665 99999999988754
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=2.4e-14 Score=157.75 Aligned_cols=14 Identities=21% Similarity=0.304 Sum_probs=8.1
Q ss_pred ccccEEEeeecCCC
Q 045539 148 SSVTTIDLSINGLS 161 (897)
Q Consensus 148 ~~L~~LdLs~N~l~ 161 (897)
++|+.|+|++|.++
T Consensus 72 ~~L~~L~Ls~n~l~ 85 (372)
T 3un9_A 72 SSLRQLNLAGVRMT 85 (372)
T ss_dssp TTCCEEECTTSCCC
T ss_pred hhCCEEEecCCCCC
Confidence 44556666666555
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=1.8e-12 Score=142.10 Aligned_cols=105 Identities=21% Similarity=0.250 Sum_probs=94.6
Q ss_pred ceecccCc-cccCcCCccccCCCCCcEEeccC-ccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccc
Q 045539 103 QTLDLSHN-KLSGNIPSSIFNMHTLKLLYFSD-NQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFA 180 (897)
Q Consensus 103 ~~L~Ls~n-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~ 180 (897)
..++++++ +|+ .+|. |..+++|++|+|++ |+|.+.++..|.++++|++|+|++|+|++..|..|++|++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35788888 898 5888 99999999999996 99999999999999999999999999998888899999999999999
Q ss_pred cccccccccccccccccccccccccccccc
Q 045539 181 TNNLVGVAPVTIFNMSALKEIYLLNNSLSG 210 (897)
Q Consensus 181 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 210 (897)
+|+|+++.+..|..++ |+.|+|++|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9999998887777776 9999999999873
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=3.8e-14 Score=156.11 Aligned_cols=88 Identities=23% Similarity=0.204 Sum_probs=57.3
Q ss_pred ccCCcEEEccCCCCCCCccccccCc-----cchhhhcccCcccccccchhhh-cccccccccccccccccCCCcccc---
Q 045539 338 LGNLLVLELGGNNLTEPIPITFSQL-----QTLQALGLTRNKLAGPITDELC-HLARLHSLVLQGNKFSGSIPSCLG--- 408 (897)
Q Consensus 338 l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~--- 408 (897)
+++|+.|+|++|.++......+... ++|++|+|++|.++......+. .+++|++|+|++|+|+......++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4678899999999886544444433 6788888888888754444433 456777788888777644333332
Q ss_pred --cccccceeccccccccC
Q 045539 409 --NLTSLRVLYLGLNRFTS 425 (897)
Q Consensus 409 --~l~~L~~L~L~~N~l~~ 425 (897)
..++|+.|+|++|.++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~ 169 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTA 169 (372)
T ss_dssp HSTTCCCCEEECCSSCCHH
T ss_pred HhcCCccceeeCCCCCCCh
Confidence 34556666666666653
No 404
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=6e-12 Score=132.07 Aligned_cols=147 Identities=16% Similarity=0.133 Sum_probs=116.5
Q ss_pred HHHHhcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCccceEeeeecCCCceEE
Q 045539 612 LLRATDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIR-HRNLVKIISSCSNDDFKAL 690 (897)
Q Consensus 612 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 690 (897)
+....+.|+.....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..++++++++.+.+..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3455678988888999999999999865 6899999987532222346889999999995 6778899999988889999
Q ss_pred EEEeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------
Q 045539 691 IMKYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFG------------------------------------- 733 (897)
Q Consensus 691 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~------------------------------------- 733 (897)
||||++|.++.+.... ......++.+++++++.||..
T Consensus 88 v~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 9999999999876321 123347889999999999751
Q ss_pred -------------------CCCCcEeCCCCCCCeeeCCCCcEEEeeccCcc
Q 045539 734 -------------------HSTPIIHCDLKPSNVLLDEDMVAHISDFGIAK 765 (897)
Q Consensus 734 -------------------h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~ 765 (897)
+..+++|||++|.||+++++..+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 11568999999999999876666799999765
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.21 E-value=6.5e-11 Score=132.02 Aligned_cols=130 Identities=11% Similarity=0.114 Sum_probs=63.9
Q ss_pred ccccCCC-CCcEEeccCccccCCccccccccccccEEEeeecC---CCCCCCccccCccccccccccccccccccccccc
Q 045539 118 SSIFNMH-TLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSING---LSGEMPREIGNLPYLARLAFATNNLVGVAPVTIF 193 (897)
Q Consensus 118 ~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~---l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 193 (897)
.+|.++. .|+.+.+.++ ++.+...+|.++++|+.+.++.|. ++..-...|.++.+|+.+.+..+ ++.+...+|.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 3454442 3555555443 444445555555555555555543 33222344555555555555433 4455555566
Q ss_pred ccccccccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEcc
Q 045539 194 NMSALKEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELG 253 (897)
Q Consensus 194 ~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (897)
++.+|+.+.+..+ +. .++...+....+|+.+.+..+ ++..-...|.+ .+|+.+.+.
T Consensus 135 ~c~~L~~i~lp~~-~~-~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip 190 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VT-SVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIP 190 (394)
T ss_dssp TCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEEC
T ss_pred hhcccccccccce-ee-eecccceecccccccccccce-eeEeccccccc-cceeEEEEC
Confidence 6666666666433 22 455555555555555555443 22222333332 445555544
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.17 E-value=1.9e-10 Score=128.28 Aligned_cols=124 Identities=12% Similarity=0.129 Sum_probs=89.9
Q ss_pred cCCccccccccc-cccEEEeeecCCCCCCCccccCccccccccccccc---ccccccccccccccccccccccccccccC
Q 045539 137 FGSLSFFIFNVS-SVTTIDLSINGLSGEMPREIGNLPYLARLAFATNN---LVGVAPVTIFNMSALKEIYLLNNSLSGSL 212 (897)
Q Consensus 137 ~~~~~~~~~~l~-~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 212 (897)
+.+...+|.+++ .|+.+.+..+ ++..-...|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+.++ ++ .+
T Consensus 52 t~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~-~I 128 (394)
T 4gt6_A 52 SKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT-EI 128 (394)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS-EE
T ss_pred eEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc-ee
Confidence 344556777774 5899998754 664556778899999999988774 77788888999999998888755 44 67
Q ss_pred CccccccccccceeecccccccccccccccCCCcccEEEccccccccccCccc
Q 045539 213 PSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNLFSGFIPNTF 265 (897)
Q Consensus 213 p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~f 265 (897)
+...+....+|+.+.+..+ +.......|..+.+|+.+.+..+ ++.+...+|
T Consensus 129 ~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF 179 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAF 179 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred hhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccc
Confidence 7777778888888888754 34455667788888888888654 443333333
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.13 E-value=6.9e-11 Score=123.76 Aligned_cols=139 Identities=15% Similarity=0.099 Sum_probs=102.5
Q ss_pred hcCCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCc--cceEeeeecCCCceEEEEE
Q 045539 616 TDRFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRN--LVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 616 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e 693 (897)
...|.+....+.|..+.||++...+|+.+++|+.... ....+.+|+++++.+.+.+ +.+++++...++..++|||
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 3445543333466679999998777889999997654 2245678999999986444 5668888888888999999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGH--------------------------------------- 734 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h--------------------------------------- 734 (897)
|++|.++. ... .+ ...++.++++.++.||...
T Consensus 96 ~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 96 EVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp CCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred ecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 99999884 211 12 2357788888888885321
Q ss_pred ----------------CCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 735 ----------------STPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 735 ----------------~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
..+++|||++|.||++++++.+.|+|||.+..
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998776677999998753
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.02 E-value=1.5e-12 Score=134.42 Aligned_cols=147 Identities=18% Similarity=0.179 Sum_probs=82.1
Q ss_pred CcceeeeEeeCCCCeEEEEEeec---ccccccCCC-CCCCCCCCceecccCccccCcCCc-cccCCCCCcE--EeccCcc
Q 045539 63 VCSWIGITCDVNSHRVIGLNISS---FNLQGTIPP-QLGNLSSLQTLDLSHNKLSGNIPS-SIFNMHTLKL--LYFSDNQ 135 (897)
Q Consensus 63 ~c~w~gv~c~~~~~~v~~l~l~~---~~l~g~~~~-~l~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~--L~Ls~N~ 135 (897)
.|+|.|+.|+.+..+|+.+-..+ ..+.|.+++ .+..++. .|...+|.-++.++- .|...+.|+. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 69999999998777887666555 344555542 2222222 233334443333322 1444455554 5666664
Q ss_pred cc---CCccccccccccccEEEeeecCCCC--CCCccccCcccccccccccccccccccccccccc--cccccccccccc
Q 045539 136 LF---GSLSFFIFNVSSVTTIDLSINGLSG--EMPREIGNLPYLARLAFATNNLVGVAPVTIFNMS--ALKEIYLLNNSL 208 (897)
Q Consensus 136 l~---~~~~~~~~~l~~L~~LdLs~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l 208 (897)
.. +..+....++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 32 2222223456677777777777775 3345556677777777777777665 1233333 666666666666
Q ss_pred cccCC
Q 045539 209 SGSLP 213 (897)
Q Consensus 209 ~~~~p 213 (897)
.+.+|
T Consensus 233 ~~~~~ 237 (267)
T 3rw6_A 233 CDTFR 237 (267)
T ss_dssp GGGCS
T ss_pred ccccC
Confidence 65554
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=7.4e-11 Score=128.62 Aligned_cols=182 Identities=14% Similarity=0.196 Sum_probs=127.7
Q ss_pred CCeEEEEEeecccccc-c-------CCCCCCCCCCCceecccCcccc---------CcCCccccCCCCCcEEeccCcccc
Q 045539 75 SHRVIGLNISSFNLQG-T-------IPPQLGNLSSLQTLDLSHNKLS---------GNIPSSIFNMHTLKLLYFSDNQLF 137 (897)
Q Consensus 75 ~~~v~~l~l~~~~l~g-~-------~~~~l~~l~~L~~L~Ls~n~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~ 137 (897)
..+|++|.+...+..| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 4568888887666553 2 2455677899999999765431 234455678899999999988311
Q ss_pred CCccccccccccccEEEeeecCCCCCCCcccc--Cccccccccccc--cccc------ccccccc--ccccccccccccc
Q 045539 138 GSLSFFIFNVSSVTTIDLSINGLSGEMPREIG--NLPYLARLAFAT--NNLV------GVAPVTI--FNMSALKEIYLLN 205 (897)
Q Consensus 138 ~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~--~l~~L~~L~L~~--N~l~------~~~~~~~--~~l~~L~~L~L~~ 205 (897)
.++. + .+++|++|+|+.|.+.......+. .+++|++|+|+. |... .+.+ .+ ..+++|++|+|++
T Consensus 186 -~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~-~l~~~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 186 -SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP-LFSKDRFPNLKWLGIVD 261 (362)
T ss_dssp -BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG-GSCTTTCTTCCEEEEES
T ss_pred -eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH-HHhcCCCCCcCEEeCCC
Confidence 2222 3 388999999999987644334444 789999999863 2221 1111 22 3578999999999
Q ss_pred ccccccCCcccc--ccccccceeeccccccccc----ccccccCCCcccEEEccccccccc
Q 045539 206 NSLSGSLPSRID--LSLPNVETLNLGINSFYGT----VPSSITNASKLSDLELGVNLFSGF 260 (897)
Q Consensus 206 N~l~~~~p~~~~--~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~ 260 (897)
|.+++..+..++ ..+++|++|+|+.|.+.+. ++..+.++++|+.|+|++|.++..
T Consensus 262 ~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 262 AEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp CTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred CCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 999854433332 2578999999999999874 455556789999999999988754
No 410
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.92 E-value=6.1e-10 Score=119.36 Aligned_cols=185 Identities=17% Similarity=0.177 Sum_probs=125.6
Q ss_pred CCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCc--cceEeeeecCCC---ceEEEEEec
Q 045539 622 NNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIR-HRN--LVKIISSCSNDD---FKALIMKYM 695 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~ 695 (897)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++.....++ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4668999999999873 56999986543 33467889999999884 322 455665554433 458999999
Q ss_pred cCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 045539 696 PNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFG------------------------------------------ 733 (897)
Q Consensus 696 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~------------------------------------------ 733 (897)
+|.++.+.... .++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99988754332 367778888899999999888741
Q ss_pred -------------CCCCcEeCCCCCCCeeeCC--CCcEEEeeccCccccCCCCceeeeeccccCccc---CCcCccCC--
Q 045539 734 -------------HSTPIIHCDLKPSNVLLDE--DMVAHISDFGIAKLLSGEDQLSIQIQTLATIGY---MAPEYGTK-- 793 (897)
Q Consensus 734 -------------h~~~ivH~Dlkp~NIll~~--~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y---~aPE~~~~-- 793 (897)
....++|+|++|.||++++ ...+.++||+.+..-.+..... ....+ ..|+....
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~------~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFI------SLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHH------TTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHH------HHHhhccccCHHHHHHHH
Confidence 1145899999999999998 5568899999886543211100 00111 22221100
Q ss_pred ---C---------CCCccchHHHHHHHHHHHHcCCCCCcc
Q 045539 794 ---G---------RVCTRGDVYSYGIMLMEMFTKKKPTDE 821 (897)
Q Consensus 794 ---~---------~~~~~sDv~slGvil~elltg~~p~~~ 821 (897)
+ ......+.|++|.++|++.+|+.+|-.
T Consensus 250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 0 011235899999999999999887643
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.92 E-value=2e-09 Score=118.34 Aligned_cols=142 Identities=15% Similarity=0.197 Sum_probs=108.0
Q ss_pred cCCeeecccceEEEEEEecCCceEEEEEec--hhh-HHHHHHHHHHHHHHHhcC--CCccceEeeeecCC---CceEEEE
Q 045539 621 ENNLIGIGSFGSIYVARLQDGMEVAVKVFH--QQY-ERALKSFEDECEVMKRIR--HRNLVKIISSCSND---DFKALIM 692 (897)
Q Consensus 621 ~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 692 (897)
..+.++.|.++.||+++.. +..+++|+.. ... ......+.+|+++++.+. +..++++++++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4577899999999999876 4678899876 332 122356788999999997 45688999988776 4589999
Q ss_pred EeccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 045539 693 KYMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGH-------------------------------------- 734 (897)
Q Consensus 693 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h-------------------------------------- 734 (897)
||++|..+.+... ..++..++..++.+++++|+.||...
T Consensus 121 e~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 9999988754211 23678888999999999999998520
Q ss_pred -----------------CCCcEeCCCCCCCeeeCCCCc--EEEeeccCccc
Q 045539 735 -----------------STPIIHCDLKPSNVLLDEDMV--AHISDFGIAKL 766 (897)
Q Consensus 735 -----------------~~~ivH~Dlkp~NIll~~~~~--~kL~DFg~a~~ 766 (897)
..+++|||++|.||+++.++. +.++||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 357999999999999997753 68999998865
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.88 E-value=6e-10 Score=121.41 Aligned_cols=186 Identities=15% Similarity=0.174 Sum_probs=128.9
Q ss_pred CCCCceecccCccccC-c-------CCccccCCCCCcEEeccCcccc---------CCccccccccccccEEEeeecCCC
Q 045539 99 LSSLQTLDLSHNKLSG-N-------IPSSIFNMHTLKLLYFSDNQLF---------GSLSFFIFNVSSVTTIDLSINGLS 161 (897)
Q Consensus 99 l~~L~~L~Ls~n~l~~-~-------~p~~~~~l~~L~~L~Ls~N~l~---------~~~~~~~~~l~~L~~LdLs~N~l~ 161 (897)
+..++.|.+......| . +..++..+++|+.|.+.++... +.+...+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3467778777655542 1 2344667899999999776431 235566778899999999998422
Q ss_pred CCCCccccCccccccccccccccccccccccc--cccccccccccc--cccccc-----CCcccc-ccccccceeecccc
Q 045539 162 GEMPREIGNLPYLARLAFATNNLVGVAPVTIF--NMSALKEIYLLN--NSLSGS-----LPSRID-LSLPNVETLNLGIN 231 (897)
Q Consensus 162 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~~-~~l~~L~~L~L~~N 231 (897)
.++. +. +++|++|+|..+.+.......+. .+++|++|+|+. |...+. +...+. ..+|+|++|+|++|
T Consensus 186 -~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~ 262 (362)
T 2ra8_A 186 -SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDA 262 (362)
T ss_dssp -BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESC
T ss_pred -eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCC
Confidence 3343 43 89999999999988765544454 789999999863 222222 111111 24799999999999
Q ss_pred ccccccccccc---CCCcccEEEccccccccccCccccccccccccCCCCcccccccccccCCCcEEEecCCCCCC
Q 045539 232 SFYGTVPSSIT---NASKLSDLELGVNLFSGFIPNTFVNMADNYLTSSTPELSFLSSLTNCKKLKVLILTGNPLDG 304 (897)
Q Consensus 232 ~l~~~~p~~l~---~l~~L~~L~L~~N~l~~~~~~~f~~l~~~~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~ 304 (897)
.+.+..+..+. .+++|++|+|+.|.+.+.....+ ...+.++++|+.|+|++|.++.
T Consensus 263 ~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L-----------------~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 263 EEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLL-----------------LDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHH-----------------HTTHHHHTTCSEEECCSBBCCH
T ss_pred CCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHH-----------------HhhcccCCcceEEECCCCcCCH
Confidence 99765544443 58899999999999886543322 1224567999999999998874
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.79 E-value=5.6e-08 Score=107.56 Aligned_cols=58 Identities=0% Similarity=-0.069 Sum_probs=33.0
Q ss_pred CCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccccCCccccccccccccEEEee
Q 045539 96 LGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLS 156 (897)
Q Consensus 96 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 156 (897)
+..-.+|+.+.+.. .++..-..+|.++++|+.++|..+ +..+....|.++ +|+.+.+.
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~ 99 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGM 99 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEEC
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECC
Confidence 34445666666653 354344556777777777777544 555555556555 45555544
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.79 E-value=6.6e-08 Score=107.01 Aligned_cols=129 Identities=7% Similarity=-0.002 Sum_probs=82.4
Q ss_pred cccCCCCCcEEeccCccccCCccccccccccccEEEeeecCCCCCCCccccCcccccccccccccccccccccccccccc
Q 045539 119 SIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSINGLSGEMPREIGNLPYLARLAFATNNLVGVAPVTIFNMSAL 198 (897)
Q Consensus 119 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 198 (897)
.+....+|+.+.+.++ ++.+...+|.++.+|+.++|..+ ++..-...|.+. +|+.+.+.. .++.+...+|.+. +|
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~aF~~~-~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGME-RVKKFGDYVFQGT-DL 115 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECT-TCCEECTTTTTTC-CC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCc-eeeEeccceeccC-Cc
Confidence 4666788999888754 66677788999999999999754 553334566665 577766654 3666666666654 68
Q ss_pred cccccccccccccCCccccccccccceeecccccccccccccccCCCcccEEEccccc
Q 045539 199 KEIYLLNNSLSGSLPSRIDLSLPNVETLNLGINSFYGTVPSSITNASKLSDLELGVNL 256 (897)
Q Consensus 199 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (897)
+++.+.++ ++ .+....+.. .+++.+.+..+ ++......|.++.+++...+..+.
T Consensus 116 ~~i~lp~~-~~-~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~ 169 (379)
T 4h09_A 116 DDFEFPGA-TT-EIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNN 169 (379)
T ss_dssp SEEECCTT-CC-EECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTC
T ss_pred ccccCCCc-cc-ccccccccc-ceeeeeeccce-eeccccchhccccccccccccccc
Confidence 88887654 22 444444433 34555555433 333445566667777777666544
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.65 E-value=1.3e-07 Score=101.80 Aligned_cols=137 Identities=18% Similarity=0.237 Sum_probs=103.9
Q ss_pred CCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCC----CccceEeeeecCCCceEEEEE
Q 045539 618 RFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRH----RNLVKIISSCSNDDFKALIMK 693 (897)
Q Consensus 618 ~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e 693 (897)
.+...+.++.|....||++ |+.+++|+..... ....+.+|+++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5666788999999999998 6789999875432 23568899999999875 234555555 46689999
Q ss_pred eccCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 045539 694 YMPNGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGH--------------------------------------- 734 (897)
Q Consensus 694 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h--------------------------------------- 734 (897)
|++|.++.+.... .++..+...++.++++.++.||...
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999988743321 2567777888888888888887321
Q ss_pred ---------------------CCCcEeCCCCCCCeeeCCCCcEEEeeccCcccc
Q 045539 735 ---------------------STPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 767 (897)
Q Consensus 735 ---------------------~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~ 767 (897)
...++|+|++|.||+++.+..+.++||+.+...
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999998766799999988653
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.57 E-value=1.5e-09 Score=106.84 Aligned_cols=119 Identities=10% Similarity=0.087 Sum_probs=76.5
Q ss_pred cCCCCCCCCCCCceecccCc-cccC----cCCccccCCCCCcEEeccCccccCCc----cccccccccccEEEeeecCCC
Q 045539 91 TIPPQLGNLSSLQTLDLSHN-KLSG----NIPSSIFNMHTLKLLYFSDNQLFGSL----SFFIFNVSSVTTIDLSINGLS 161 (897)
Q Consensus 91 ~~~~~l~~l~~L~~L~Ls~n-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~LdLs~N~l~ 161 (897)
.+...+...++|++|+|++| .+.. .+...+...++|++|+|++|+|.... ...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455677888999999998 8863 24455667788999999999886533 344555577888888888877
Q ss_pred CC----CCccccCccccccccc--ccccccccccc----ccccccccccccccccccc
Q 045539 162 GE----MPREIGNLPYLARLAF--ATNNLVGVAPV----TIFNMSALKEIYLLNNSLS 209 (897)
Q Consensus 162 ~~----~p~~l~~l~~L~~L~L--~~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~ 209 (897)
.. +...+...+.|++|+| ++|.|+..... .+...++|++|+|++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 42 2344555566777777 66666654322 2233355555555555553
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.49 E-value=1.2e-08 Score=105.21 Aligned_cols=61 Identities=20% Similarity=0.248 Sum_probs=39.4
Q ss_pred CcccccCCcccccccccCceecccCCCCCCCcC--CCcEEeccCCccCCCCch-------hhhhhcccceEe
Q 045539 464 IPITIGGLKNLQQMFLEYNRLEGSIPESFGDLS--SLEVLDLSKNKISGAIPA-------SLQKLLYLKHLN 526 (897)
Q Consensus 464 ~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 526 (897)
+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|. .+..+++|+.||
T Consensus 188 l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 188 MSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred chhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 445556667777777777777653 3344444 777888888887766652 356677777765
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.48 E-value=1.1e-06 Score=93.68 Aligned_cols=136 Identities=15% Similarity=0.132 Sum_probs=99.2
Q ss_pred CCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCC---ccceEeeeec-CCCceEEEEEeccC
Q 045539 622 NNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHR---NLVKIISSCS-NDDFKALIMKYMPN 697 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 697 (897)
.+.++.|....||+. |+.+++|+... ......+.+|+++++.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888999999998 57899998643 23346788999999999742 3566777663 45678899999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 045539 698 GSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFG-------------------------------------------- 733 (897)
Q Consensus 698 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~-------------------------------------------- 733 (897)
.++.+.... .++..+...++.++++.|+.||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 988763221 145556666677777777666632
Q ss_pred -------------CCCCcEeCCCCCCCeeeCC---CCc-EEEeeccCccc
Q 045539 734 -------------HSTPIIHCDLKPSNVLLDE---DMV-AHISDFGIAKL 766 (897)
Q Consensus 734 -------------h~~~ivH~Dlkp~NIll~~---~~~-~kL~DFg~a~~ 766 (897)
....++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335699999999999987 455 58999998764
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.45 E-value=1.2e-06 Score=91.67 Aligned_cols=136 Identities=20% Similarity=0.160 Sum_probs=100.3
Q ss_pred Ceeecccce-EEEEEEec-CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCccceEeeeecCCCceEEEEEeccCCC
Q 045539 623 NLIGIGSFG-SIYVARLQ-DGMEVAVKVFHQQYERALKSFEDECEVMKRIR-HRNLVKIISSCSNDDFKALIMKYMPNGS 699 (897)
Q Consensus 623 ~~lg~G~~g-~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 699 (897)
+.+..|..+ .||+.... +++.+++|+-.... ...+.+|++.++.+. +--+.++++++.+++..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~---~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGSV---ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETHH---HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCCC---HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345556655 69998765 46789999876442 345778999998885 3347788999999999999999999998
Q ss_pred hhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhc----------------------------------------------
Q 045539 700 LENCLYSGTCMLDIFQRLNIMIDVALALEYLHFG---------------------------------------------- 733 (897)
Q Consensus 700 L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~---------------------------------------------- 733 (897)
+.+...... .....+..+++..|+.||..
T Consensus 107 ~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 107 AFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 877654321 23345667777777777631
Q ss_pred ---------CCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 734 ---------HSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 734 ---------h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
+...++|+|+.+.||++++++.+-|+||+.+..
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 122379999999999999887778999998753
No 420
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.37 E-value=1.4e-06 Score=95.11 Aligned_cols=77 Identities=10% Similarity=0.119 Sum_probs=59.0
Q ss_pred CCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCc--cceEeeeecCC-CceEEEEEec
Q 045539 619 FSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRN--LVKIISSCSND-DFKALIMKYM 695 (897)
Q Consensus 619 y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~ 695 (897)
....+.++.|....+|+.+. +|+.+++|+.... ..+.+|+.+++.+.... +.++++++.+. +..|+||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 33457789999999999986 4789999987643 25778999999887433 56777776654 6789999999
Q ss_pred cCCChh
Q 045539 696 PNGSLE 701 (897)
Q Consensus 696 ~~gsL~ 701 (897)
+|.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 987664
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.34 E-value=1.3e-06 Score=92.00 Aligned_cols=77 Identities=14% Similarity=0.120 Sum_probs=61.0
Q ss_pred CcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCC---ccceEeeeecCCCceEEEEEecc
Q 045539 620 SENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHR---NLVKIISSCSNDDFKALIMKYMP 696 (897)
Q Consensus 620 ~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~ 696 (897)
...+.++.|.++.||+++..+|+.+++|+...........+.+|++.++.+++. .+++++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345789999999999999888999999996543222235788999999999865 577888764 3689999999
Q ss_pred CCCh
Q 045539 697 NGSL 700 (897)
Q Consensus 697 ~gsL 700 (897)
|+++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 422
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.26 E-value=7.6e-08 Score=94.52 Aligned_cols=94 Identities=20% Similarity=0.233 Sum_probs=66.7
Q ss_pred CccccCccCCcEEEccCC-CCCCC----ccccccCccchhhhcccCccccccc----chhhhcccccccccccccccccC
Q 045539 332 PQVVGNLGNLLVLELGGN-NLTEP----IPITFSQLQTLQALGLTRNKLAGPI----TDELCHLARLHSLVLQGNKFSGS 402 (897)
Q Consensus 332 p~~~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~ 402 (897)
...+...++|++|+|++| .++.. +...+...++|++|+|++|+|.... .+.+...++|++|+|++|.|+..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345677889999999999 88753 2344556678889999999887533 33444557788888888888743
Q ss_pred ----CCcccccccccceecc--ccccccC
Q 045539 403 ----IPSCLGNLTSLRVLYL--GLNRFTS 425 (897)
Q Consensus 403 ----~p~~~~~l~~L~~L~L--~~N~l~~ 425 (897)
+...+...++|++|+| ++|.++.
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 3445566677788888 6777764
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.21 E-value=1.2e-06 Score=95.79 Aligned_cols=81 Identities=7% Similarity=0.072 Sum_probs=57.7
Q ss_pred CCee-ecccceEEEEEEec-------CCceEEEEEechhhH---HHHHHHHHHHHHHHhcC-C--CccceEeeeecCC--
Q 045539 622 NNLI-GIGSFGSIYVARLQ-------DGMEVAVKVFHQQYE---RALKSFEDECEVMKRIR-H--RNLVKIISSCSND-- 685 (897)
Q Consensus 622 ~~~l-g~G~~g~Vy~a~~~-------~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 685 (897)
.+.| +.|....+|+.... +++.+++|+...... .....+.+|+++++.+. + -.+.+++.++.++
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998754 267899998754320 01245678888888885 3 3577888887665
Q ss_pred -CceEEEEEeccCCChhH
Q 045539 686 -DFKALIMKYMPNGSLEN 702 (897)
Q Consensus 686 -~~~~lv~e~~~~gsL~~ 702 (897)
+..++||||++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 45789999999877653
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.02 E-value=1.5e-05 Score=88.53 Aligned_cols=75 Identities=12% Similarity=0.099 Sum_probs=50.2
Q ss_pred CCeeecccceEEEEEEec-CCceEEEEEechhhH-------HHHHHHHHHHHHHHhcCC--C-ccceEeeeecCCCceEE
Q 045539 622 NNLIGIGSFGSIYVARLQ-DGMEVAVKVFHQQYE-------RALKSFEDECEVMKRIRH--R-NLVKIISSCSNDDFKAL 690 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~l 690 (897)
.+.+|.|..+.||+++.. +++.|++|....... ...+++..|+++++.+.. | .+++++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 467899999999999754 468899998653211 123456779999988742 3 344666543 345689
Q ss_pred EEEeccCC
Q 045539 691 IMKYMPNG 698 (897)
Q Consensus 691 v~e~~~~g 698 (897)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999774
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.97 E-value=2.2e-05 Score=85.08 Aligned_cols=138 Identities=14% Similarity=0.142 Sum_probs=80.1
Q ss_pred CeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcC--CCccceEeee------ecCCCceEEEEEe
Q 045539 623 NLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIR--HRNLVKIISS------CSNDDFKALIMKY 694 (897)
Q Consensus 623 ~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~------~~~~~~~~lv~e~ 694 (897)
+.++.|..+.||++...+| .+++|+..... ..+..|+++++.+. .-.+++++.. ...++..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4466677899999987654 59999987532 23344555555553 1123444431 1345678899999
Q ss_pred ccCCChh-----H---------hhhc--C----C-------CCCCHHHH-------------------------------
Q 045539 695 MPNGSLE-----N---------CLYS--G----T-------CMLDIFQR------------------------------- 716 (897)
Q Consensus 695 ~~~gsL~-----~---------~l~~--~----~-------~~~~~~~~------------------------------- 716 (897)
++|.++. + .++. . . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9987542 0 1111 0 0 00122110
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcc
Q 045539 717 LNIMIDVALALEYLHF----------GHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAK 765 (897)
Q Consensus 717 ~~i~~~i~~~L~~Lh~----------~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~ 765 (897)
..+..++..++++|+. ....+++|||+++.||+++.++.+.++||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345566642 135789999999999999888899999999775
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.83 E-value=8.5e-05 Score=78.79 Aligned_cols=136 Identities=13% Similarity=0.103 Sum_probs=92.3
Q ss_pred CCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcC---CCccceEeeeecCCCceEEEEEeccCC
Q 045539 622 NNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIR---HRNLVKIISSCSNDDFKALIMKYMPNG 698 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~g 698 (897)
.+.|+.|....+|+.... ++.+++|+.... ....+..|++.++.+. ...++++++++..++..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 467899999999999864 678999987644 2456788999998884 356888999888888899999999987
Q ss_pred ChhH-----------hhhcCCC---------------------CCCHHHHH---HHH----------------HHHHHHH
Q 045539 699 SLEN-----------CLYSGTC---------------------MLDIFQRL---NIM----------------IDVALAL 727 (897)
Q Consensus 699 sL~~-----------~l~~~~~---------------------~~~~~~~~---~i~----------------~~i~~~L 727 (897)
.+.. .++.... .-+|.... ++. ..+...+
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1222110 11343321 111 1112122
Q ss_pred -HHHHh-cCCCCcEeCCCCCCCeeeCCCCcEEEeecc
Q 045539 728 -EYLHF-GHSTPIIHCDLKPSNVLLDEDMVAHISDFG 762 (897)
Q Consensus 728 -~~Lh~-~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg 762 (897)
..|.. .....++|+|+.+.|++++.++ +.++||+
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23311 1256799999999999999887 8899974
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.82 E-value=3.3e-06 Score=80.64 Aligned_cols=59 Identities=5% Similarity=0.019 Sum_probs=32.1
Q ss_pred CCCceecccCccccCcCCccccCCCCCcEEeccCcc-ccCCcccccccc----ccccEEEeeec
Q 045539 100 SSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQ-LFGSLSFFIFNV----SSVTTIDLSIN 158 (897)
Q Consensus 100 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~LdLs~N 158 (897)
-.|++|||+++.++..--..+.++++|++|+|++|. +++..-..++.+ ++|++|||++|
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C 124 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISC 124 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCC
Confidence 357777777776664434445666666666666663 443333333332 24555555554
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.72 E-value=6.4e-06 Score=78.62 Aligned_cols=83 Identities=11% Similarity=0.148 Sum_probs=46.1
Q ss_pred CCcEEeccCccccCCccccccccccccEEEeeecC-CCCCCCccccCc----ccccccccccc-cccccccccccccccc
Q 045539 125 TLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLSING-LSGEMPREIGNL----PYLARLAFATN-NLVGVAPVTIFNMSAL 198 (897)
Q Consensus 125 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~-l~~~~p~~l~~l----~~L~~L~L~~N-~l~~~~~~~~~~l~~L 198 (897)
+|++|||+++.++...-..+.++++|++|+|++|. ++..--..++.+ ++|++|+|++| +|+...-..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 46666666666655555555566666666666663 443222234443 24666666665 3555444455566666
Q ss_pred ccccccccc
Q 045539 199 KEIYLLNNS 207 (897)
Q Consensus 199 ~~L~L~~N~ 207 (897)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.61 E-value=0.00016 Score=76.27 Aligned_cols=79 Identities=14% Similarity=0.119 Sum_probs=58.4
Q ss_pred CCCcCCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCC---CccceEeeeecCCCceEEEEEe
Q 045539 618 RFSENNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRH---RNLVKIISSCSNDDFKALIMKY 694 (897)
Q Consensus 618 ~y~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~lv~e~ 694 (897)
+....+.+|.|..+.||+.+..+|+.|++|+...........+..|++.|+.+.. -.+++++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 4455678999999999999999999999998764433333467889999998852 2355666543 24789999
Q ss_pred ccCCCh
Q 045539 695 MPNGSL 700 (897)
Q Consensus 695 ~~~gsL 700 (897)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987643
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.58 E-value=0.00014 Score=77.91 Aligned_cols=158 Identities=14% Similarity=0.176 Sum_probs=91.0
Q ss_pred ccCCHHHHHHHhcCCCcC-----CeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCc--cce
Q 045539 605 RRFSYHELLRATDRFSEN-----NLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRN--LVK 677 (897)
Q Consensus 605 ~~~~~~~~~~~~~~y~~~-----~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 677 (897)
..++.+++.....+|... +.|+.|....+|+....+| .+++|+..... ....+..|+++++.+.... +.+
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCc
Confidence 345677777777777652 3466788899999987655 68899887531 1234556777777774222 333
Q ss_pred Eeeee------cCCCceEEEEEeccCCChhH-----h---------hhcC--C--CC----CC---HHHHHH--------
Q 045539 678 IISSC------SNDDFKALIMKYMPNGSLEN-----C---------LYSG--T--CM----LD---IFQRLN-------- 718 (897)
Q Consensus 678 l~~~~------~~~~~~~lv~e~~~~gsL~~-----~---------l~~~--~--~~----~~---~~~~~~-------- 718 (897)
++... ...+..+++|+|++|..+.. + ++.. . .. .. |.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 43221 12356789999999865421 0 1110 0 00 11 111000
Q ss_pred ----HHHHHHHHHHHHHh----cCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcc
Q 045539 719 ----IMIDVALALEYLHF----GHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAK 765 (897)
Q Consensus 719 ----i~~~i~~~L~~Lh~----~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~ 765 (897)
+...+.+.++++.. ....+++|+|+.+.||+++++..+.++||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 01113344555532 124579999999999999887666899999765
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.54 E-value=0.00018 Score=80.23 Aligned_cols=79 Identities=15% Similarity=0.183 Sum_probs=49.4
Q ss_pred CCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCceeeeecccc--CcccCCcCccCCC---CCCccchHHHHHHH
Q 045539 734 HSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSIQIQTLA--TIGYMAPEYGTKG---RVCTRGDVYSYGIM 808 (897)
Q Consensus 734 h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~sDv~slGvi 808 (897)
+...++|||++|.||+++.++ ++++||+.+..-.+..... ...+ ...|.+|+..... ......++.+....
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIG---AYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQ 305 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHH---HHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHH
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHH---HHHHHHHHHHHhcccccccccchHHHHHHHHHHHHH
Confidence 578899999999999998776 9999999887532111000 0001 1345666543211 12234566688888
Q ss_pred HHHHHcCC
Q 045539 809 LMEMFTKK 816 (897)
Q Consensus 809 l~elltg~ 816 (897)
+|+.+++.
T Consensus 306 ~~~~y~~~ 313 (420)
T 2pyw_A 306 TWNLFNKR 313 (420)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877653
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.44 E-value=0.00028 Score=76.01 Aligned_cols=140 Identities=11% Similarity=0.081 Sum_probs=75.4
Q ss_pred CeeecccceE-EEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcC-C-CccceEeeeecCCCceEEEEEeccCCC
Q 045539 623 NLIGIGSFGS-IYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIR-H-RNLVKIISSCSNDDFKALIMKYMPNGS 699 (897)
Q Consensus 623 ~~lg~G~~g~-Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~niv~l~~~~~~~~~~~lv~e~~~~gs 699 (897)
+.++.|+... +|+....+|+.+++|....... ..+..|+++++.+. + -.+.+++.+..+.+ +++||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4565555554 6677654467788887554321 23345677777664 2 23566776644443 78999997766
Q ss_pred hhHhhhcCC-------------------------CCCCHHHHH-------HH-------------HHHHHHHHHHHH---
Q 045539 700 LENCLYSGT-------------------------CMLDIFQRL-------NI-------------MIDVALALEYLH--- 731 (897)
Q Consensus 700 L~~~l~~~~-------------------------~~~~~~~~~-------~i-------------~~~i~~~L~~Lh--- 731 (897)
+.+++.... ..++..... .+ ...+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654332110 112211100 00 001111122221
Q ss_pred hcCCCCcEeCCCCCCCeeeCCC----CcEEEeeccCcccc
Q 045539 732 FGHSTPIIHCDLKPSNVLLDED----MVAHISDFGIAKLL 767 (897)
Q Consensus 732 ~~h~~~ivH~Dlkp~NIll~~~----~~~kL~DFg~a~~~ 767 (897)
..+...++|||+.+.||+++.+ +.+.++||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1245689999999999999874 68999999988653
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.39 E-value=0.00065 Score=72.89 Aligned_cols=159 Identities=11% Similarity=0.105 Sum_probs=92.5
Q ss_pred cccCCHHHHHHHhcCCCc-----CCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCC--ccc
Q 045539 604 IRRFSYHELLRATDRFSE-----NNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHR--NLV 676 (897)
Q Consensus 604 ~~~~~~~~~~~~~~~y~~-----~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv 676 (897)
....+.+++....+.|.. .+.++ |....||++...+|+.+++|+..... .....+..|..+++.+... .++
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeec
Confidence 344566666666665543 23466 88889999987778889999986431 1224566788888777522 244
Q ss_pred eEeee-----ecCCCceEEEEEeccCCChh-----Hh---------hhc----C----CCCCCHHHH-------------
Q 045539 677 KIISS-----CSNDDFKALIMKYMPNGSLE-----NC---------LYS----G----TCMLDIFQR------------- 716 (897)
Q Consensus 677 ~l~~~-----~~~~~~~~lv~e~~~~gsL~-----~~---------l~~----~----~~~~~~~~~------------- 716 (897)
+++.. ...++..+++|||++|.++. .+ ++. . ....++...
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL 165 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence 44443 12245568899999886542 11 110 0 011222211
Q ss_pred ---------HHHHHHHHHHHHHHHh-cCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 717 ---------LNIMIDVALALEYLHF-GHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 717 ---------~~i~~~i~~~L~~Lh~-~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
...+.+++..++.... .....++|||+++.||+++ + .+.++||+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 166 IPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 0111122222222210 1356789999999999999 4 899999998754
No 434
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.31 E-value=0.00054 Score=74.66 Aligned_cols=140 Identities=12% Similarity=0.125 Sum_probs=85.0
Q ss_pred CCeeecccceEEEEEEec--------CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCccceEeeeecCCCceEEEE
Q 045539 622 NNLIGIGSFGSIYVARLQ--------DGMEVAVKVFHQQYERALKSFEDECEVMKRIR-HRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 692 (897)
.+.+..|-...+|++... +++.|++|+.... ........+|.++++.+. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356778888999999865 2578999986432 122345568999998885 3334677777764 2999
Q ss_pred EeccCCChhHh-----------------hhcCC----CCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 045539 693 KYMPNGSLENC-----------------LYSGT----CMLD--IFQRLNIMIDVAL-------------------ALEYL 730 (897)
Q Consensus 693 e~~~~gsL~~~-----------------l~~~~----~~~~--~~~~~~i~~~i~~-------------------~L~~L 730 (897)
||++|.++..- ++.-. .... +.++.++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998765321 11111 1122 3445555544322 12222
Q ss_pred H-----hcCCCCcEeCCCCCCCeeeCCC----CcEEEeeccCccc
Q 045539 731 H-----FGHSTPIIHCDLKPSNVLLDED----MVAHISDFGIAKL 766 (897)
Q Consensus 731 h-----~~h~~~ivH~Dlkp~NIll~~~----~~~kL~DFg~a~~ 766 (897)
. ......++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 1234578999999999999876 7899999998753
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.18 E-value=0.00066 Score=71.90 Aligned_cols=128 Identities=13% Similarity=0.122 Sum_probs=77.1
Q ss_pred CCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCcc-ceEeeeecCCCceEEEEEec-cCCC
Q 045539 622 NNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNL-VKIISSCSNDDFKALIMKYM-PNGS 699 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~gs 699 (897)
.+.|+.|....+|++ +.+++|+........ ....+|+.+++.+....+ .++++++. +..++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCcc
Confidence 678999999999998 569999876532211 122468888877752222 56666543 3347899999 6655
Q ss_pred hhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------------------
Q 045539 700 LENCLYSGTCMLDIFQRLNIMIDVALALEYLHF----------------------------------------------- 732 (897)
Q Consensus 700 L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~----------------------------------------------- 732 (897)
+...-... ...+..++++.|+.+|.
T Consensus 95 l~~~~~~~--------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 166 (301)
T 3dxq_A 95 MSPEKFKT--------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL 166 (301)
T ss_dssp CCHHHHHH--------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred CCHhhHhh--------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 53210000 00112222222222221
Q ss_pred ---cCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccc
Q 045539 733 ---GHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 766 (897)
Q Consensus 733 ---~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~ 766 (897)
.....++|+|+.|.||+ ..++.+.++||..+..
T Consensus 167 ~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 167 AAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp HSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 13345899999999999 5566789999998764
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.14 E-value=0.00051 Score=76.62 Aligned_cols=73 Identities=16% Similarity=0.238 Sum_probs=50.8
Q ss_pred CCeeecccceEEEEEEecC--------CceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCccceEeeeecCCCceEEEE
Q 045539 622 NNLIGIGSFGSIYVARLQD--------GMEVAVKVFHQQYERALKSFEDECEVMKRIR-HRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 692 (897)
.+.|+.|....||++...+ ++.|++|+...... ...+.+|..+++.+. +.-.+++++.+.+ .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4678889999999998753 57899999854211 134457888888885 3334677776653 3899
Q ss_pred EeccCCCh
Q 045539 693 KYMPNGSL 700 (897)
Q Consensus 693 e~~~~gsL 700 (897)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987554
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.13 E-value=2.5e-05 Score=76.02 Aligned_cols=88 Identities=11% Similarity=0.123 Sum_probs=54.3
Q ss_pred CCCCCCCCCceecccCc-cccC----cCCccccCCCCCcEEeccCccccCCc----cccccccccccEEEeeecCCCCCC
Q 045539 94 PQLGNLSSLQTLDLSHN-KLSG----NIPSSIFNMHTLKLLYFSDNQLFGSL----SFFIFNVSSVTTIDLSINGLSGEM 164 (897)
Q Consensus 94 ~~l~~l~~L~~L~Ls~n-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~LdLs~N~l~~~~ 164 (897)
..+.+-+.|++|+|++| +|.. .+-+.+..-+.|++|+|++|+|.... ...+..-+.|++|+|++|.|...-
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 33455678888888885 7752 24455666678888888888886443 334445567788888888776422
Q ss_pred C----ccccCccccccccccc
Q 045539 165 P----REIGNLPYLARLAFAT 181 (897)
Q Consensus 165 p----~~l~~l~~L~~L~L~~ 181 (897)
- ..+..-+.|++|+|++
T Consensus 115 a~ala~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCC
T ss_pred HHHHHHHHhhCCceeEEECCC
Confidence 1 2233334455555553
No 438
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.12 E-value=0.00074 Score=75.65 Aligned_cols=74 Identities=15% Similarity=0.188 Sum_probs=49.4
Q ss_pred CCeeecccceEEEEEEecC-CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCcc-ceEeeeecCCCceEEEEEeccCCC
Q 045539 622 NNLIGIGSFGSIYVARLQD-GMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNL-VKIISSCSNDDFKALIMKYMPNGS 699 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gs 699 (897)
.+.|+.|-...+|++...+ ++.|++|+......... ...+|..+++.+...++ +++++++.. ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 4678889999999998775 57899998754321111 11578899998874444 577777742 35999998865
Q ss_pred h
Q 045539 700 L 700 (897)
Q Consensus 700 L 700 (897)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 5
No 439
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.83 E-value=0.0018 Score=70.65 Aligned_cols=74 Identities=14% Similarity=0.226 Sum_probs=45.9
Q ss_pred CCeeecccceEEEEEEecC---------CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCc-cceEeeeecCCCceEEE
Q 045539 622 NNLIGIGSFGSIYVARLQD---------GMEVAVKVFHQQYERALKSFEDECEVMKRIRHRN-LVKIISSCSNDDFKALI 691 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv 691 (897)
.+.++.|....+|++...+ ++.+++|+........ .....|.++++.+...+ +.++++... .++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~-~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL-YNTISEFEVYKTMSKYKIAPQLLNTFN----GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT-SCHHHHHHHHHHHHHTTSSCCEEEEET----TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce-ecHHHHHHHHHHHHhcCCCCceEEecC----CcEE
Confidence 3567888889999998654 2689999876532211 12357888888875323 456665542 3689
Q ss_pred EEeccCCCh
Q 045539 692 MKYMPNGSL 700 (897)
Q Consensus 692 ~e~~~~gsL 700 (897)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999988654
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.80 E-value=0.0018 Score=69.66 Aligned_cols=66 Identities=11% Similarity=0.118 Sum_probs=43.7
Q ss_pred ccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcC---CCccceEeee------ecCCCceEEEEEeccCC
Q 045539 628 GSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIR---HRNLVKIISS------CSNDDFKALIMKYMPNG 698 (897)
Q Consensus 628 G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~------~~~~~~~~lv~e~~~~g 698 (897)
|....||+....+| .+++|+...... ..|+++++.+. -|.+++.+.. ...++..+++|+|++|.
T Consensus 34 g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~ 106 (339)
T 3i1a_A 34 DTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAP 106 (339)
T ss_dssp CSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCC
T ss_pred ccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCC
Confidence 33689999988777 899998765431 34566666553 2324555432 23356789999999987
Q ss_pred Ch
Q 045539 699 SL 700 (897)
Q Consensus 699 sL 700 (897)
.+
T Consensus 107 ~~ 108 (339)
T 3i1a_A 107 NG 108 (339)
T ss_dssp BT
T ss_pred cC
Confidence 65
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.67 E-value=0.0019 Score=58.54 Aligned_cols=56 Identities=23% Similarity=0.256 Sum_probs=37.4
Q ss_pred cccccCceec-ccCCCCCCCcCCCcEEeccCCccCCCCchhhhhhcccceEeccCCccc
Q 045539 476 QMFLEYNRLE-GSIPESFGDLSSLEVLDLSKNKISGAIPASLQKLLYLKHLNLSFNKLE 533 (897)
Q Consensus 476 ~L~ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 533 (897)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4556666665 23554432 36788888888888555666777888888877777664
No 442
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.63 E-value=0.0058 Score=59.56 Aligned_cols=105 Identities=12% Similarity=0.017 Sum_probs=70.7
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCccccCCCCceeeee
Q 045539 698 GSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSIQI 777 (897)
Q Consensus 698 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~~~~~~~~~~~~~ 777 (897)
-+|.+.+...+.++++++++.++.|.+.+|...-. ++.-..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc------------
Confidence 38999999988899999999999999999877621 11111333456889999999888764 1111
Q ss_pred ccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCc
Q 045539 778 QTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTD 820 (897)
Q Consensus 778 ~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~ 820 (897)
.....+.|||... ...+.+.=|||+|+++|..+--..|-+
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~ 137 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN 137 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence 0123466888753 355678899999999999998666543
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.63 E-value=0.005 Score=67.26 Aligned_cols=141 Identities=15% Similarity=0.149 Sum_probs=85.6
Q ss_pred CCeeecccceEEEEEEecC--------CceEEEEEechhhHH---------H---------HHHHHHHHHHHHhcC-CCc
Q 045539 622 NNLIGIGSFGSIYVARLQD--------GMEVAVKVFHQQYER---------A---------LKSFEDECEVMKRIR-HRN 674 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~~---------~---------~~~~~~E~~~l~~l~-h~n 674 (897)
.+.|..|-...+|++...+ ++.|++++.-..... . .+....|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3567778889999998753 367899887433211 0 112235888888885 444
Q ss_pred cceEeeeecCCCceEEEEEeccCCChhHh-----------------hhcCC----CCCC--HHHHHHHHHHHH-------
Q 045539 675 LVKIISSCSNDDFKALIMKYMPNGSLENC-----------------LYSGT----CMLD--IFQRLNIMIDVA------- 724 (897)
Q Consensus 675 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~~----~~~~--~~~~~~i~~~i~------- 724 (897)
..++++++..+ +|+||++|.+|..- ++... .... +..+.++..++.
T Consensus 137 ~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 66788877543 89999997655221 11111 1122 223333433221
Q ss_pred ---------------HHH----HHHHh-cCCCCcEeCCCCCCCeeeCCC------CcEEEeeccCccc
Q 045539 725 ---------------LAL----EYLHF-GHSTPIIHCDLKPSNVLLDED------MVAHISDFGIAKL 766 (897)
Q Consensus 725 ---------------~~L----~~Lh~-~h~~~ivH~Dlkp~NIll~~~------~~~kL~DFg~a~~ 766 (897)
.-+ +++.. .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 22211 244578999999999999876 7899999998753
No 444
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.60 E-value=0.00022 Score=69.29 Aligned_cols=14 Identities=43% Similarity=0.430 Sum_probs=6.8
Q ss_pred cCCcEEEccCCCCC
Q 045539 339 GNLLVLELGGNNLT 352 (897)
Q Consensus 339 ~~L~~L~L~~N~l~ 352 (897)
+.|++|+|++|.|+
T Consensus 98 ~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 98 PSLRVLNVESNFLT 111 (197)
T ss_dssp SSCCEEECCSSBCC
T ss_pred CccCeEecCCCcCC
Confidence 34445555555444
No 445
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.48 E-value=0.003 Score=57.21 Aligned_cols=55 Identities=16% Similarity=0.208 Sum_probs=31.7
Q ss_pred EEEeeccccc-ccCCCCCCCCCCCceecccCccccCcCCccccCCCCCcEEeccCccc
Q 045539 80 GLNISSFNLQ-GTIPPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLYFSDNQL 136 (897)
Q Consensus 80 ~l~l~~~~l~-g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 136 (897)
.++-++++|+ ..+|..+. .+|++|||++|+|+...+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 3555666665 34554332 3466666666666654455556666666666666644
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.50 E-value=0.035 Score=61.13 Aligned_cols=74 Identities=12% Similarity=0.200 Sum_probs=49.7
Q ss_pred CCeeecccceEEEEEEecC--------CceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCccceEeeeecCCCceEEEE
Q 045539 622 NNLIGIGSFGSIYVARLQD--------GMEVAVKVFHQQYERALKSFEDECEVMKRIR-HRNLVKIISSCSNDDFKALIM 692 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 692 (897)
.+.+..|-...+|+....+ ++.|++|+........ -...+|.++++.+. +.-..++++.+. .+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-YDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-CCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-cCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567788889999998763 5789999875432211 12256888888875 333456666443 27899
Q ss_pred EeccCCCh
Q 045539 693 KYMPNGSL 700 (897)
Q Consensus 693 e~~~~gsL 700 (897)
||++|.++
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998764
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.00 E-value=0.1 Score=57.36 Aligned_cols=30 Identities=27% Similarity=0.375 Sum_probs=25.2
Q ss_pred CcEeCCCCCCCeee------CCCCcEEEeeccCccc
Q 045539 737 PIIHCDLKPSNVLL------DEDMVAHISDFGIAKL 766 (897)
Q Consensus 737 ~ivH~Dlkp~NIll------~~~~~~kL~DFg~a~~ 766 (897)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4566899999998764
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.64 E-value=1.9 Score=41.91 Aligned_cols=122 Identities=13% Similarity=0.190 Sum_probs=80.5
Q ss_pred CCCccceEeeeecCCCceEEEEEecc-CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCee
Q 045539 671 RHRNLVKIISSCSNDDFKALIMKYMP-NGSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVL 749 (897)
Q Consensus 671 ~h~niv~l~~~~~~~~~~~lv~e~~~-~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIl 749 (897)
.||+.++. .+-.+++.+.+.++.-+ +-++.. + ...+...+++++..|+....++ ..=+|--++|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i----k~~~~~eKlr~l~ni~~l~~~~-----~~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I----KSFTKNEKLRYLLNIKNLEEVN-----RTRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G----GGSCHHHHHHHHHHGGGGGGGG-----GSSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H----HhcCHHHHHHHHHHHHHHHHHh-----cCceEEEEecceEE
Confidence 48888866 45556665555555433 223333 2 2367889999999998877554 23478889999999
Q ss_pred eCCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCcccccCcc
Q 045539 750 LDEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEIFIGEL 827 (897)
Q Consensus 750 l~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~~~~~~ 827 (897)
++.++.+++.-.|....+ +|. ..+...=.-.+=+++..+++++..|++-..+..
T Consensus 112 f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G~l 165 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEGNL 165 (215)
T ss_dssp ECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHSCG
T ss_pred EcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcChH
Confidence 999999999877754322 222 112222234567889999999999987655533
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=73.94 E-value=8.8 Score=37.39 Aligned_cols=117 Identities=10% Similarity=0.135 Sum_probs=76.6
Q ss_pred CCCccceEeeeecCCCceEEEEEeccC-CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeCCCCCCCee
Q 045539 671 RHRNLVKIISSCSNDDFKALIMKYMPN-GSLENCLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHCDLKPSNVL 749 (897)
Q Consensus 671 ~h~niv~l~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~Lh~~h~~~ivH~Dlkp~NIl 749 (897)
.||++ -..+-.+++...+.++.-++ -++... . ..+...+++++.+++.... .|...-+|--++|+||+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-~----~~~~~eKlrll~nl~~L~~----~~~~~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-R----KTTLLSRIRAAIHLVSKVK----HHSARRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-H----TSCHHHHHHHHHHHHHHHS----SCCSSSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-H----hcCHHHHHHHHHHHHHHHH----HhhhCceeEEEeCceEE
Confidence 47887 33344666666666665433 244432 2 3678889999998887655 13455688899999999
Q ss_pred eCCCCcEEEeeccCccccCCCCceeeeeccccCcccCCcCccCCCCCCccchHHHHHHHHHHHHcCCCCCccc
Q 045539 750 LDEDMVAHISDFGIAKLLSGEDQLSIQIQTLATIGYMAPEYGTKGRVCTRGDVYSYGIMLMEMFTKKKPTDEI 822 (897)
Q Consensus 750 l~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvil~elltg~~p~~~~ 822 (897)
++.++.+++.-.|.-.. ++|.- .+..-=.-.+=+++..++.++..|++-
T Consensus 117 f~~~~~p~i~hRGi~~~-------------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 117 FNRALEPFFLHVGVKES-------------------LPPDE-----WDDERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp ECTTCCEEESCCEETTT-------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred EeCCCcEEEEEcCCccc-------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999987775332 23331 111112334668888899998888763
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=70.24 E-value=0.57 Score=52.23 Aligned_cols=59 Identities=15% Similarity=0.081 Sum_probs=16.7
Q ss_pred cCCeeecccceEEEEEEecC-CceEEE------EEechhh--HHHHHHHHHHHHHHHhcCCCccceEeeee
Q 045539 621 ENNLIGIGSFGSIYVARLQD-GMEVAV------KVFHQQY--ERALKSFEDECEVMKRIRHRNLVKIISSC 682 (897)
Q Consensus 621 ~~~~lg~G~~g~Vy~a~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 682 (897)
..+.+| ||+||+|.+.. ..+||+ |..+... .+....+.+|..+++..+|||+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 445666 99999998764 467888 6655322 22345678899999999999999987764
No 451
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=43.34 E-value=2.8e+02 Score=31.92 Aligned_cols=45 Identities=22% Similarity=0.155 Sum_probs=32.9
Q ss_pred HHHHHHHHHHH--HHHHHHHhcCCCCcEeCCCCCCCeeeCCCCcEEEeeccCcc
Q 045539 714 FQRLNIMIDVA--LALEYLHFGHSTPIIHCDLKPSNVLLDEDMVAHISDFGIAK 765 (897)
Q Consensus 714 ~~~~~i~~~i~--~~L~~Lh~~h~~~ivH~Dlkp~NIll~~~~~~kL~DFg~a~ 765 (897)
..+..++..+| ..+.|+ +-=+|=.++|||++.+|.+.=+|||.+.
T Consensus 529 ~ar~nF~~SlA~~Svv~YI-------LGlGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYL-------LGVGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHH-------HTCCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHH-------ccCCCCCCcceEEeCCCCEEEEeehhhh
Confidence 34455555554 345666 2237889999999999999999999874
No 452
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=37.61 E-value=26 Score=24.27 Aligned_cols=10 Identities=10% Similarity=-0.037 Sum_probs=4.5
Q ss_pred hhhhhhhhhc
Q 045539 577 LTLKWKLIEC 586 (897)
Q Consensus 577 ~~~~~~~~~~ 586 (897)
.+++|++++.
T Consensus 31 ~~~~~RRr~~ 40 (44)
T 2ks1_B 31 IGLFMRRRHI 40 (44)
T ss_dssp HHHHHHTTTC
T ss_pred HHHHhhhhHh
Confidence 3444544433
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=35.14 E-value=32 Score=23.84 Aligned_cols=12 Identities=8% Similarity=-0.102 Sum_probs=5.3
Q ss_pred Hhhhhhhhhhcc
Q 045539 576 TLTLKWKLIECW 587 (897)
Q Consensus 576 ~~~~~~~~~~~~ 587 (897)
..+++|++++..
T Consensus 29 ~~~~~~RRRr~~ 40 (44)
T 2l2t_A 29 TFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHTTCSS
T ss_pred HHHHHhhhhhhh
Confidence 334445544433
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.83 E-value=39 Score=28.20 Aligned_cols=39 Identities=8% Similarity=-0.009 Sum_probs=18.1
Q ss_pred CccccCCCCCcEEeccCccccCCccccccccccccEEEee
Q 045539 117 PSSIFNMHTLKLLYFSDNQLFGSLSFFIFNVSSVTTIDLS 156 (897)
Q Consensus 117 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 156 (897)
..+|.++++|+.+.+-.+ ++.+....|.+|.+|+.+.+.
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 344555555555555443 333334444444444444443
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=32.89 E-value=33 Score=28.67 Aligned_cols=46 Identities=17% Similarity=0.084 Sum_probs=30.6
Q ss_pred CCCCCcCccccCccCCcEEEccCCCCCCCccccccCccchhhhcccC
Q 045539 326 SISGNIPQVVGNLGNLLVLELGGNNLTEPIPITFSQLQTLQALGLTR 372 (897)
Q Consensus 326 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 372 (897)
.++.+...+|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 445555667777777777777654 5555566777777777766654
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=31.03 E-value=3.6e+02 Score=30.52 Aligned_cols=82 Identities=13% Similarity=0.109 Sum_probs=49.9
Q ss_pred ceEeeeecCCCceEEEEEeccCCChhHhhhcCC--------------C--CCCHHHHHHHHHHHH--HHHHHHHhcCCCC
Q 045539 676 VKIISSCSNDDFKALIMKYMPNGSLENCLYSGT--------------C--MLDIFQRLNIMIDVA--LALEYLHFGHSTP 737 (897)
Q Consensus 676 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~--~~~~~~~~~i~~~i~--~~L~~Lh~~h~~~ 737 (897)
++.|.+........ +.|++++.++.+.+...+ . ...+..+..++..+| ..+.|+
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YI------- 473 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYI------- 473 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHH-------
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhhee-------
Confidence 34455554444433 357777665555543221 0 012445555665554 346666
Q ss_pred cEeCCCCCCCeeeCCCCcEEEeeccCcc
Q 045539 738 IIHCDLKPSNVLLDEDMVAHISDFGIAK 765 (897)
Q Consensus 738 ivH~Dlkp~NIll~~~~~~kL~DFg~a~ 765 (897)
+-=+|=.++|||++.+|.+.=+|||.+.
T Consensus 474 LGigDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 474 LGVGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HTCCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred eeccCCCCcceeEcCCCCEeeeehHHhh
Confidence 2236888999999999999999999874
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=29.89 E-value=1.4e+02 Score=30.95 Aligned_cols=136 Identities=14% Similarity=0.102 Sum_probs=69.5
Q ss_pred CCeeecccceEEEEEEecCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCccceEeee--------------------
Q 045539 622 NNLIGIGSFGSIYVARLQDGMEVAVKVFHQQYERALKSFEDECEVMKRIRHRNLVKIISS-------------------- 681 (897)
Q Consensus 622 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~-------------------- 681 (897)
++....|. +.||.+.. ++..|+||-.. ....+.+-.++...-.+.-|+..-+.-.
T Consensus 74 I~~s~~Gs-tgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~ 148 (342)
T 1cja_A 74 IERSEKGT-EGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRV 148 (342)
T ss_dssp EEECCSTT-SCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCH
T ss_pred EEeccCCC-CCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHH
Confidence 34444554 55665554 47889999542 1223344444444444555553222211
Q ss_pred --ecCCCceEEEEEeccCCChhHhhhcCC-CCCCHHHHHHHHHHHH--HHHHHHHhcCCCC-cEe-CCCCCCCeeeCCCC
Q 045539 682 --CSNDDFKALIMKYMPNGSLENCLYSGT-CMLDIFQRLNIMIDVA--LALEYLHFGHSTP-IIH-CDLKPSNVLLDEDM 754 (897)
Q Consensus 682 --~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~--~~L~~Lh~~h~~~-ivH-~Dlkp~NIll~~~~ 754 (897)
........++|||.+|..|.+.-...- ..+.. +...++. -++..+....++- .++ .--.+.|||+++++
T Consensus 149 l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n 224 (342)
T 1cja_A 149 ITTLANQANILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERG 224 (342)
T ss_dssp HHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBT
T ss_pred HHHhhcccceehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCC
Confidence 001224569999999877654321100 11222 2233332 2344443323332 221 23588999997655
Q ss_pred -cEEEeeccCccc
Q 045539 755 -VAHISDFGIAKL 766 (897)
Q Consensus 755 -~~kL~DFg~a~~ 766 (897)
.+.++|-+.+..
T Consensus 225 ~~~~~IDhn~af~ 237 (342)
T 1cja_A 225 ATVVPIDSKIIPL 237 (342)
T ss_dssp TCEEECSCCCCCC
T ss_pred CeEEEEcCCcccc
Confidence 488999988864
No 458
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=29.28 E-value=38 Score=22.65 Aligned_cols=21 Identities=10% Similarity=0.176 Sum_probs=12.2
Q ss_pred hhhhhhhhhhhhhHHHHHHHh
Q 045539 557 KMLLLVIILPLSTALIVVVTL 577 (897)
Q Consensus 557 c~~~l~~vi~~~~~~~~~~~~ 577 (897)
-+.+.++++..++++.+++.+
T Consensus 10 ~GaIAGiVvG~v~gv~li~~l 30 (38)
T 2k1k_A 10 GGEIVAVIFGLLLGAALLLGI 30 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeeeehHHHHHHHHHHHH
Confidence 356667777666665544433
No 459
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=27.43 E-value=18 Score=20.06 Aligned_cols=9 Identities=44% Similarity=1.306 Sum_probs=7.0
Q ss_pred CCcceeeeE
Q 045539 62 SVCSWIGIT 70 (897)
Q Consensus 62 ~~c~w~gv~ 70 (897)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999974
Done!