BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045540
(428 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase
pdb|2BGH|B Chain B, Crystal Structure Of Vinorine Synthase
Length = 421
Score = 244 bits (623), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 233/432 (53%), Gaps = 37/432 (8%)
Query: 3 VEVISKETIKPSTPTPKHRQIYKFSFTDQISPSFYIPLIYFY-NLNDHKLGNNIISGDLK 61
+E +S+E I PS+PTP+ + YK S DQ+ + +IP I FY N D L S LK
Sbjct: 5 MEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLK 64
Query: 62 KSLSKVLTHYYPLAGCLN-DDYVDCNDKGVLFLEAKVKCNLSQIIGEP-NPRKLNKFLPD 119
+SLSKVLTH+YPLAG +N + VDCND GV F+EA+V+ LSQ I KL+++LP
Sbjct: 65 QSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPS 124
Query: 120 HV---------KNFILAIQVNFFNCGNIAIGACVSHKIADASTFITFIKNWXXXXXXXXX 170
++ LA++++FF CG AIG +SHKIAD + TF+ W
Sbjct: 125 AAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCR---- 180
Query: 171 XXDDSVKICPEL-LSATLFPPRDVGESCRVSLPAEKNIVCKSFVFRGSRIAALKEKYAGG 229
++ + P L+A FPP D S L ++N+V K FVF +I AL+ + +
Sbjct: 181 --GETEIVLPNFDLAARHFPPVDNTPSPE--LVPDENVVMKRFVFDKEKIGALRAQASSA 236
Query: 230 IHP---TRVEALSAFIWSRFAASTEIKIGPERVSMLVHAVNLRKRMDPPQPDDSFGNISG 286
+RV+ + A+IW T K G + ++V AVNLR RM+PP P + GNI+
Sbjct: 237 SEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIAT 296
Query: 287 PTATIISEDIGEECYGLVKMFRDAIGKINKDYAKKLQEGVFEHFGLLGSINDDGFDRREV 346
+ + ++ L+ R ++ K D+ +L +G+ + L + +E+
Sbjct: 297 LLFAAVDAEWDKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYEL---------EPQEL 347
Query: 347 VNFYYTSLCRFPLYEADFGWGKPIWVAWGGWPYRNIAVLMDTKCGNGIEAWIHLKEEDMV 406
++F TS CR Y+ DFGWGKP+ +P RN A+LMDT+ G+G+EAW+ + E++M
Sbjct: 348 LSF--TSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDEMA 405
Query: 407 KFEADKEFLSYV 418
E LS V
Sbjct: 406 MLPV--ELLSLV 415
>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora
pdb|4G0B|B Chain B, Structure Of Native Hct From Coffea Canephora
Length = 436
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 194/445 (43%), Gaps = 51/445 (11%)
Query: 1 MDVEVISKETIKPSTPTPKHRQIYKFSFTDQISPSFYIPLIYFYNLNDHKLGNNIISGDL 60
M +EV ++P+ TP R ++ S D + P+F+ P +YFY N + L
Sbjct: 3 MKIEVKESTMVRPAQETPG-RNLWN-SNVDLVVPNFHTPSVYFYRPTGSS--NFFDAKVL 58
Query: 61 KKSLSKVLTHYYPLAGCLNDDY-----VDCNDKGVLFLEAKVKCNLSQIIGEPNPRKLNK 115
K +LS+ L +YP+AG L D ++CN +GVLF+EA+ + +L +
Sbjct: 59 KDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRR 118
Query: 116 FLP--DHVKNF----ILAIQVNFFNCGNIAIGACVSHKIADASTFITFIKNWXXXXXXXX 169
+P D+ + +L +QV +F CG +++G + H AD + + FI +W
Sbjct: 119 LIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLD 178
Query: 170 XXXDDSVKICPELLSATLFPPRDVGE------------SCRVSLPAEKN-----IVCKSF 212
P + TL RD + + +VS K+ F
Sbjct: 179 V-------TLPPFIDRTLLRARDPPQPQFQHIEYQPPPALKVSPQTAKSDSVPETAVSIF 231
Query: 213 VFRGSRIAALKEKY---AGGIHPTRVEALSAFIWSRFAASTEIKIGPERVSMLVHAVNLR 269
+I+ALK K I + E L+ +W + +++ ++ + L A + R
Sbjct: 232 KLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGR 289
Query: 270 KRMDPPQPDDSFGNI---SGPTATIISEDIGEECYGLVKMFRDAIGKINKDYAKKLQEGV 326
R+ P P FGN+ + P A + Y K+ DA+ +++ DY + + +
Sbjct: 290 ARLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKI-HDALARMDNDYLRSALDYL 348
Query: 327 FEHFGLLGSINDDGFDRREVVNFYYTSLCRFPLYEADFGWGKPIWVAWGGWPYRNIAVLM 386
L + G + N TS R P+++ADFGWG+PI++ GG Y ++ ++
Sbjct: 349 ELQPDLKALVR--GAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIL 406
Query: 387 DTKCGNG-IEAWIHLKEEDMVKFEA 410
+ +G + I L+ E M F++
Sbjct: 407 PSPTNDGSMSVAISLQGEHMKLFQS 431
>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 2)
Length = 439
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 193/445 (43%), Gaps = 51/445 (11%)
Query: 1 MDVEVISKETIKPSTPTPKHRQIYKFSFTDQISPSFYIPLIYFYNLNDHKLGNNIISGDL 60
M +EV ++P+ TP R ++ S D + P+F+ P +YFY N + L
Sbjct: 6 MKIEVKESTMVRPAQETPG-RNLWN-SNVDLVVPNFHTPSVYFYRPTGSS--NFFDAKVL 61
Query: 61 KKSLSKVLTHYYPLAGCLNDDY-----VDCNDKGVLFLEAKVKCNLSQIIGEPNPRKLNK 115
K +LS+ L +YP+AG L D ++CN +GVLF+EA+ + +L +
Sbjct: 62 KDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRR 121
Query: 116 FLP--DHVKNF----ILAIQVNFFNCGNIAIGACVSHKIADASTFITFIKNWXXXXXXXX 169
+P D+ + +L +QV +F CG +++G + H AD + + FI +W
Sbjct: 122 LIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLD 181
Query: 170 XXXDDSVKICPELLSATLF----PPRDVGESCRVSLPAEKNIVCKS-------------F 212
P + TL PP+ + P + ++ F
Sbjct: 182 V-------TLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIF 234
Query: 213 VFRGSRIAALKEKY---AGGIHPTRVEALSAFIWSRFAASTEIKIGPERVSMLVHAVNLR 269
+I+ALK K I + E L+ +W + +++ ++ + L A + R
Sbjct: 235 KLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGR 292
Query: 270 KRMDPPQPDDSFGNI---SGPTATIISEDIGEECYGLVKMFRDAIGKINKDYAKKLQEGV 326
R+ P P FGN+ + P A + Y K+ DA+ +++ DY + + +
Sbjct: 293 ARLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKI-HDALARMDNDYLRSALDYL 351
Query: 327 FEHFGLLGSINDDGFDRREVVNFYYTSLCRFPLYEADFGWGKPIWVAWGGWPYRNIAVLM 386
L + G + N TS R P+++ADFGWG+PI++ GG Y ++ ++
Sbjct: 352 ELQPDLKALVR--GAHTFKXPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIL 409
Query: 387 DTKCGNG-IEAWIHLKEEDMVKFEA 410
+ +G + I L+ E M F++
Sbjct: 410 PSPTNDGSMSVAISLQGEHMKLFQS 434
>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 1)
pdb|4G22|B Chain B, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 1)
Length = 439
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 192/445 (43%), Gaps = 51/445 (11%)
Query: 1 MDVEVISKETIKPSTPTPKHRQIYKFSFTDQISPSFYIPLIYFYNLNDHKLGNNIISGDL 60
M +EV ++P+ TP R ++ S D + P+F+ P +YFY N + L
Sbjct: 6 MKIEVKESTMVRPAQETPG-RNLWN-SNVDLVVPNFHTPSVYFYRPTGSS--NFFDAKVL 61
Query: 61 KKSLSKVLTHYYPLAGCLNDDY-----VDCNDKGVLFLEAKVKCNLSQIIGEPNPRKLNK 115
K +LS+ L +YP+AG L D ++CN +GVLF+EA+ + +L +
Sbjct: 62 KDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRR 121
Query: 116 FLP--DHVKNF----ILAIQVNFFNCGNIAIGACVSHKIADASTFITFIKNWXXXXXXXX 169
+P D+ + +L +QV +F G +++G + H AD + + FI +W
Sbjct: 122 LIPAVDYSQGISSYALLVLQVTYFKXGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLD 181
Query: 170 XXXDDSVKICPELLSATLF----PPRDVGESCRVSLPAEKNIVCKS-------------F 212
P + TL PP+ + P + ++ F
Sbjct: 182 V-------TLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIF 234
Query: 213 VFRGSRIAALKEKY---AGGIHPTRVEALSAFIWSRFAASTEIKIGPERVSMLVHAVNLR 269
+I+ALK K I + E L+ +W + +++ ++ + L A + R
Sbjct: 235 KLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGR 292
Query: 270 KRMDPPQPDDSFGNI---SGPTATIISEDIGEECYGLVKMFRDAIGKINKDYAKKLQEGV 326
R+ P P FGN+ + P A + Y K+ DA+ +++ DY + + +
Sbjct: 293 ARLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKI-HDALARMDNDYLRSALDYL 351
Query: 327 FEHFGLLGSINDDGFDRREVVNFYYTSLCRFPLYEADFGWGKPIWVAWGGWPYRNIAVLM 386
L + G + N TS R P+++ADFGWG+PI++ GG Y ++ ++
Sbjct: 352 ELQPDLKALVR--GAHTFKXPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIL 409
Query: 387 DTKCGNG-IEAWIHLKEEDMVKFEA 410
+ +G + I L+ E M F++
Sbjct: 410 PSPTNDGSMSVAISLQGEHMKLFQS 434
>pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
Complexed With Malonyl-coa
pdb|2E1T|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
Complexed With Malonyl-coa
pdb|2E1U|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
pdb|2E1U|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
Length = 454
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 158/408 (38%), Gaps = 63/408 (15%)
Query: 7 SKETIKPSTPTPKHRQIYKFSFTDQISPSFYIPLIYFYNLN-DHKLGNNIISGDLKKSLS 65
S+ + P T K Q+ F F SP I ++FY L + ++K SLS
Sbjct: 13 SQVSPPPDTLGDKSLQLTFFDFFWLRSPP--INNLFFYELPITRSQFTETVVPNIKHSLS 70
Query: 66 KVLTHYYPLAGCL----------NDDYVDCNDKGVLFLEAKVKCNLSQIIGEPNPRKLNK 115
L H+YP G L YV+ + V F E + +L+++ G +PR +K
Sbjct: 71 ITLKHFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNL--DLNELTGN-HPRNCDK 127
Query: 116 F------------LPDHVKNFILAIQVNFFNCGNIAIGACVSHKIADASTFITFIKNWXX 163
F L D +K + ++QV F IAIG H + DAST F+K W
Sbjct: 128 FYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTS 187
Query: 164 XXXXXXXXXD----------DSVKICPELLSATLFPPRDVGES-----CRVSLPAEKNIV 208
D + P L A L R ES SL + +
Sbjct: 188 IARSGNNDESFLANGTRPLYDRIIKYPMLDEAYL--KRAKVESFNEDYVTQSLAGPSDKL 245
Query: 209 CKSFVFRGSRIAALKEKYAGGI----HPTRVEALSAFIWSRFAASTEIKIGPERVSMLVH 264
+F+ + I LK++ + + + A+IWS A S +++ +
Sbjct: 246 RATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSRN-----DKLQLFGF 300
Query: 265 AVNLRKRMDPPQPDDSFGNISGPTATIISED--IGEECY-GLVKMFRDAIGKINKDYAKK 321
++ R RM PP P FGN G A I + IG+E + K+ + + K DY
Sbjct: 301 PIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDG 360
Query: 322 LQEGVFEHFGLLGSINDDGFDRREVVNFYYTSLCRFPLYEADFGWGKP 369
+ + E F ND + + + + Y+ DFGWGKP
Sbjct: 361 VLKDDMESF------NDLVSEGMPTTMTWVSGTPKLRFYDMDFGWGKP 402
>pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
Methionine Derivative
pdb|2E1V|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
Methionine Derivative
Length = 454
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 157/408 (38%), Gaps = 63/408 (15%)
Query: 7 SKETIKPSTPTPKHRQIYKFSFTDQISPSFYIPLIYFYNLN-DHKLGNNIISGDLKKSLS 65
S+ + P T K Q+ F F SP I ++FY L + ++K SLS
Sbjct: 13 SQVSPPPDTLGDKSLQLTFFDFFWLRSPP--INNLFFYELPITRSQFTETVVPNIKHSLS 70
Query: 66 KVLTHYYPLAGCL----------NDDYVDCNDKGVLFLEAKVKCNLSQIIGEPNPRKLNK 115
L H+YP G L YV+ + V F E + +L+++ G +PR +K
Sbjct: 71 ITLKHFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNL--DLNELTGN-HPRNCDK 127
Query: 116 F------------LPDHVKNFILAIQVNFFNCGNIAIGACVSHKIADASTFITFIKNWXX 163
F L D +K + ++QV F IAIG H + DAST F+K W
Sbjct: 128 FYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTS 187
Query: 164 XXXXXXXXXD----------DSVKICPELLSATLFPPRDVGES-----CRVSLPAEKNIV 208
D + P L A L R ES SL + +
Sbjct: 188 IARSGNNDESFLANGTRPLYDRIIKYPXLDEAYL--KRAKVESFNEDYVTQSLAGPSDKL 245
Query: 209 CKSFVFRGSRIAALKEKYAGGI----HPTRVEALSAFIWSRFAASTEIKIGPERVSMLVH 264
+F+ + I LK++ + + + A+IWS A S +++ +
Sbjct: 246 RATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSRN-----DKLQLFGF 300
Query: 265 AVNLRKRMDPPQPDDSFGNISGPTATIISED--IGEECY-GLVKMFRDAIGKINKDYAKK 321
++ R R PP P FGN G A I + IG+E + K+ + + K DY
Sbjct: 301 PIDRRARXKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDG 360
Query: 322 LQEGVFEHFGLLGSINDDGFDRREVVNFYYTSLCRFPLYEADFGWGKP 369
+ + E F ND + + + + Y+ DFGWGKP
Sbjct: 361 VLKDDXESF------NDLVSEGXPTTXTWVSGTPKLRFYDXDFGWGKP 402
>pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase
(Ntmat1) Complexed With Malonyl-Coa
Length = 453
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 134/353 (37%), Gaps = 55/353 (15%)
Query: 60 LKKSLSKVLTHYYPLAG---CLND-------DYVDCNDKGVLFLEAKVKCNLSQIIGEPN 109
LK SLS L +Y PLAG C D YV N V+F E+ N N
Sbjct: 60 LKDSLSLTLKYYLPLAGNVACPQDWSGYPELRYVTGNSVSVIFSESDXDFNYLIGYHPRN 119
Query: 110 PRKLNKFLPDHVK---------NFILAIQVNFFNCGNIAIGACVSHKIADASTFITFIKN 160
+ F+P + +LAIQV F I+IG H D +T + F++
Sbjct: 120 TKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATIVKFVRA 179
Query: 161 WXXXXXXXXXXXDDSVKICPELLSATLFPPRDVGES--------------CRVSLPAEKN 206
W + + P + + P VG S V P +K
Sbjct: 180 WALLNKFGGDEQFLANEFIPFYDRSVIKDPNGVGXSIWNEXKKYKHXXKXSDVVTPPDK- 238
Query: 207 IVCKSFVFRGSRIAALKE----KYAGGIHPTRVEALSAFIWS---RFAASTEIKIGPERV 259
V +F+ I LK + H T A++W+ + A+T +I
Sbjct: 239 -VRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGX 297
Query: 260 SMLVHAVNLRKRMDPPQPDDSFGN-ISGPTATIISEDI-GEECYGL-VKMFRDAIGKINK 316
A + R + +PP P FGN + G A D+ G+E + + V++ +AI K K
Sbjct: 298 EFFGCAADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRXK 357
Query: 317 DYAKKLQEGVFEHFGLLGSINDDGFDRREVVNFYYTSLCRFPLYEADFGWGKP 369
D L F+ + D D + ++ + + LY ADFGWG+P
Sbjct: 358 DEEWILSGSWFKEY--------DKVDAKRSLSVAGSP--KLDLYAADFGWGRP 400
>pdb|2RKV|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Coenzyme A And T-2 Mycotoxin
pdb|3B2S|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Coenzyme A And Deoxynivalenol
pdb|3B30|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Ethyl Coenzyme A
Length = 451
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 13/75 (17%)
Query: 352 TSLCRFPLYEADFGWG--------KPIWVAWGGWPYRNIAVLMDTKCGNGIEAWIHLKEE 403
+S + L++ DFG G +PI+ P ++ M K A + L++E
Sbjct: 378 SSWAKVGLWDYDFGLGLGKPETVRRPIFE-----PVESLMYFMPKKPDGEFCAALSLRDE 432
Query: 404 DMVKFEADKEFLSYV 418
DM + +ADKE+ Y
Sbjct: 433 DMDRLKADKEWTKYA 447
>pdb|3DFZ|A Chain A, Sirc, Precorrin-2 Dehydrogenase
pdb|3DFZ|B Chain B, Sirc, Precorrin-2 Dehydrogenase
Length = 223
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 104 IIGEPNPRKLNKFLPDHVKNFILAIQVNFFNCGNIAIGACVSH 146
I+ N + +NKF+ H+KN L + F+ GNI I A S
Sbjct: 95 IVVATNDQAVNKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSR 137
>pdb|2ZBA|A Chain A, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|B Chain B, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|C Chain C, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|D Chain D, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
Length = 459
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 360 YEADFGWGKPIWVAWGGW-PYRNIAVLMDTKCGNGIEAWIHLKEEDMVKFEADKEFLSYV 418
Y+ FG GKP V + P+ ++ K A I L++ED + +AD+E+ Y
Sbjct: 396 YDFGFGLGKPESVRRPRFEPFESLXYFXPKKPDGEFTASISLRDEDXERLKADEEWTKYA 455
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,231,772
Number of Sequences: 62578
Number of extensions: 559344
Number of successful extensions: 1137
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1101
Number of HSP's gapped (non-prelim): 19
length of query: 428
length of database: 14,973,337
effective HSP length: 102
effective length of query: 326
effective length of database: 8,590,381
effective search space: 2800464206
effective search space used: 2800464206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)