Query 045545
Match_columns 158
No_of_seqs 195 out of 2186
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 04:57:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045545.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045545hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ecf_A Glutamine phosphoribosy 100.0 1.1E-29 3.8E-34 224.6 7.4 151 2-152 325-479 (504)
2 1ao0_A Glutamine phosphoribosy 100.0 1E-29 3.6E-34 222.3 6.0 144 2-145 304-451 (459)
3 3lrt_A Ribose-phosphate pyroph 99.6 1.6E-15 5.6E-20 126.0 8.8 91 17-121 184-278 (286)
4 3dah_A Ribose-phosphate pyroph 99.6 1.6E-15 5.3E-20 127.9 8.5 85 16-113 196-280 (319)
5 1dku_A Protein (phosphoribosyl 99.6 1.5E-15 5.1E-20 127.6 8.1 80 29-121 210-300 (317)
6 3s5j_B Ribose-phosphate pyroph 99.6 2.3E-15 7.9E-20 127.2 8.0 92 17-121 194-297 (326)
7 1u9y_A RPPK;, ribose-phosphate 99.6 3.2E-15 1.1E-19 123.8 7.7 79 30-121 198-281 (284)
8 2ji4_A Phosphoribosyl pyrophos 99.5 7.8E-14 2.7E-18 119.8 8.7 79 30-121 266-356 (379)
9 1a3c_A PYRR, pyrimidine operon 99.3 1.5E-11 5E-16 94.4 8.2 60 30-89 92-157 (181)
10 1vdm_A Purine phosphoribosyltr 99.2 1.6E-11 5.3E-16 91.6 6.4 59 30-88 77-138 (153)
11 1ufr_A TT1027, PYR mRNA-bindin 99.2 4E-11 1.4E-15 92.1 7.6 60 30-89 90-155 (181)
12 1wd5_A Hypothetical protein TT 99.2 7E-11 2.4E-15 92.8 7.8 65 31-112 115-179 (208)
13 1tc1_A Protein (hypoxanthine p 99.2 5.1E-11 1.8E-15 95.2 7.0 67 29-96 96-168 (220)
14 1pzm_A HGPRT, hypoxanthine-gua 99.1 1.1E-10 3.7E-15 92.5 6.9 60 30-89 112-177 (211)
15 1hgx_A HGXPRTASE, hypoxanthine 99.1 1.5E-10 5E-15 89.2 7.4 60 30-89 89-155 (183)
16 1w30_A PYRR bifunctional prote 99.1 2.3E-10 7.9E-15 89.9 8.2 58 32-89 108-171 (201)
17 2geb_A Hypoxanthine-guanine ph 99.1 1.5E-10 5.2E-15 89.5 6.7 61 29-89 91-157 (185)
18 3o7m_A Hypoxanthine phosphorib 99.1 2.7E-10 9.3E-15 88.9 7.6 68 29-97 87-160 (186)
19 2jbh_A Phosphoribosyltransfera 99.1 1E-10 3.6E-15 93.3 5.3 67 32-99 130-202 (225)
20 2ywu_A Hypoxanthine-guanine ph 99.1 3.2E-10 1.1E-14 88.0 7.7 68 29-97 88-161 (181)
21 1yfz_A Hypoxanthine-guanine ph 99.1 2.3E-10 8E-15 89.7 6.7 61 29-89 111-177 (205)
22 2yzk_A OPRT, oprtase, orotate 99.1 5E-10 1.7E-14 86.1 8.3 74 31-125 101-175 (178)
23 1fsg_A HGPRTASE, hypoxanthine- 99.0 1.6E-10 5.6E-15 92.8 5.2 67 31-98 137-209 (233)
24 3ohp_A Hypoxanthine phosphorib 99.0 5.5E-10 1.9E-14 86.4 7.6 68 29-97 84-157 (177)
25 3hvu_A Hypoxanthine phosphorib 99.0 6.1E-10 2.1E-14 88.2 7.9 68 29-97 109-182 (204)
26 3m3h_A OPRT, oprtase, orotate 99.0 3.1E-10 1.1E-14 91.7 6.1 75 32-125 133-207 (234)
27 3dez_A OPRT, oprtase, orotate 99.0 3.4E-10 1.2E-14 92.0 6.1 75 32-125 145-219 (243)
28 1y0b_A Xanthine phosphoribosyl 99.0 6E-10 2.1E-14 86.4 7.1 67 34-111 118-184 (197)
29 1zn8_A APRT, adenine phosphori 99.0 6.9E-10 2.4E-14 85.0 6.8 39 34-72 118-156 (180)
30 2wns_A Orotate phosphoribosylt 99.0 6.1E-10 2.1E-14 87.6 6.0 90 34-157 109-198 (205)
31 1i5e_A Uracil phosphoribosyltr 99.0 6.7E-10 2.3E-14 88.0 5.5 69 29-112 117-185 (209)
32 1vch_A Phosphoribosyltransfera 98.9 7.4E-10 2.5E-14 84.2 5.2 39 34-72 118-156 (175)
33 1z7g_A HGPRT, HGPRTASE, hypoxa 98.9 7.9E-10 2.7E-14 87.8 5.6 59 32-90 122-186 (217)
34 3acd_A Hypoxanthine-guanine ph 98.9 3.1E-09 1.1E-13 82.6 8.0 61 29-89 88-154 (181)
35 2aee_A OPRT, oprtase, orotate 98.9 3.3E-09 1.1E-13 83.4 7.1 41 32-72 113-153 (211)
36 3ozf_A Hypoxanthine-guanine-xa 98.9 3.8E-09 1.3E-13 86.2 7.2 61 29-89 149-215 (250)
37 1qb7_A APRT, adenine phosphori 98.8 5.3E-09 1.8E-13 84.0 7.2 39 34-72 136-174 (236)
38 1g2q_A Adenine phosphoribosylt 98.8 3.7E-09 1.3E-13 81.7 6.0 41 32-72 118-158 (187)
39 2dy0_A APRT, adenine phosphori 98.8 3.5E-09 1.2E-13 81.9 5.9 40 33-72 123-162 (190)
40 2p1z_A Phosphoribosyltransfera 98.8 3.7E-09 1.3E-13 81.5 5.7 40 33-72 111-150 (180)
41 2ps1_A Orotate phosphoribosylt 98.8 4.6E-09 1.6E-13 83.7 5.9 85 31-125 120-205 (226)
42 1o5o_A Uracil phosphoribosyltr 98.8 6.3E-09 2.2E-13 83.5 6.4 69 29-112 129-197 (221)
43 1l1q_A Adenine phosphoribosylt 98.8 4.2E-09 1.5E-13 81.3 5.0 39 34-72 115-155 (186)
44 2e55_A Uracil phosphoribosyltr 98.7 7.4E-09 2.5E-13 82.3 5.1 68 29-112 115-182 (208)
45 2xbu_A Hypoxanthine-guanine ph 98.7 3.7E-09 1.3E-13 84.3 3.0 64 31-94 98-191 (221)
46 2ehj_A Uracil phosphoribosyltr 98.7 2.2E-08 7.4E-13 79.6 6.2 56 29-95 116-171 (208)
47 1v9s_A Uracil phosphoribosyltr 98.7 9.3E-09 3.2E-13 81.7 3.9 68 29-111 116-183 (208)
48 3mjd_A Orotate phosphoribosylt 98.7 2.4E-08 8E-13 80.6 5.5 82 32-125 132-213 (232)
49 1lh0_A OMP synthase; loop clos 98.6 3.2E-08 1.1E-12 78.2 5.3 80 32-125 114-193 (213)
50 3n2l_A OPRT, oprtase, orotate 98.6 3.2E-08 1.1E-12 80.2 4.2 79 32-125 139-218 (238)
51 1o57_A PUR operon repressor; p 98.6 4.5E-08 1.5E-12 81.1 4.9 40 33-72 193-232 (291)
52 3qw4_B UMP synthase; N-termina 98.5 1.7E-07 5.7E-12 82.1 7.3 88 34-156 363-451 (453)
53 1bd3_D Uprtase, uracil phospho 98.5 1.1E-07 3.7E-12 77.3 4.8 56 29-95 149-206 (243)
54 1nul_A XPRT, xanthine-guanine 98.5 2.9E-08 1E-12 74.4 0.9 58 33-95 78-138 (152)
55 1dqn_A Guanine phosphoribosylt 98.3 2.6E-07 9E-12 74.3 2.1 63 30-97 112-186 (230)
56 3dmp_A Uracil phosphoribosyltr 98.2 1.3E-06 4.4E-11 69.8 4.6 43 29-72 123-167 (217)
57 1xtt_A Probable uracil phospho 97.9 1.3E-05 4.4E-10 63.9 5.0 42 29-72 125-169 (216)
58 2k5c_A Uncharacterized protein 86.2 0.3 1E-05 33.3 1.6 60 88-155 19-82 (95)
59 3to5_A CHEY homolog; alpha(5)b 65.1 8.5 0.00029 27.3 4.4 32 36-70 12-43 (134)
60 2jtq_A Phage shock protein E; 55.5 25 0.00084 22.1 5.0 33 34-69 39-71 (85)
61 3hix_A ALR3790 protein; rhodan 52.1 17 0.0006 24.0 4.0 32 35-69 51-82 (106)
62 3ilm_A ALR3790 protein; rhodan 49.8 18 0.00061 25.5 3.9 32 35-69 55-86 (141)
63 3foj_A Uncharacterized protein 49.1 32 0.0011 22.3 4.9 31 35-69 55-85 (100)
64 3t4e_A Quinate/shikimate dehyd 48.3 32 0.0011 28.0 5.6 35 32-70 144-178 (312)
65 1gmx_A GLPE protein; transfera 47.9 20 0.00068 23.6 3.7 32 35-69 57-88 (108)
66 3tum_A Shikimate dehydrogenase 47.8 34 0.0011 27.2 5.6 35 32-70 121-155 (269)
67 3gk5_A Uncharacterized rhodane 45.1 27 0.00092 23.2 4.0 31 35-69 54-84 (108)
68 3dfz_A SIRC, precorrin-2 dehyd 43.5 28 0.00094 27.1 4.4 40 25-68 20-59 (223)
69 3eme_A Rhodanese-like domain p 40.9 43 0.0015 21.7 4.5 31 35-69 55-85 (103)
70 3tnl_A Shikimate dehydrogenase 40.2 46 0.0016 27.0 5.4 35 32-70 150-184 (315)
71 2hhg_A Hypothetical protein RP 39.5 41 0.0014 23.0 4.4 32 35-69 85-116 (139)
72 3pwz_A Shikimate dehydrogenase 39.3 54 0.0019 25.9 5.6 35 32-70 116-150 (272)
73 3fbt_A Chorismate mutase and s 38.7 47 0.0016 26.6 5.1 35 32-70 118-152 (282)
74 3iwh_A Rhodanese-like domain p 37.6 46 0.0016 22.1 4.3 31 35-68 55-85 (103)
75 3g5j_A Putative ATP/GTP bindin 37.4 45 0.0015 22.3 4.3 32 35-69 87-119 (134)
76 3jyo_A Quinate/shikimate dehyd 36.8 62 0.0021 25.7 5.6 35 32-70 123-157 (283)
77 3dah_A Ribose-phosphate pyroph 34.2 72 0.0025 26.1 5.7 43 30-72 48-94 (319)
78 3o8q_A Shikimate 5-dehydrogena 34.2 65 0.0022 25.6 5.3 35 32-70 122-156 (281)
79 2fsx_A RV0390, COG0607: rhodan 32.4 42 0.0014 23.5 3.5 32 35-69 79-110 (148)
80 1tq1_A AT5G66040, senescence-a 32.0 37 0.0013 23.2 3.1 32 35-69 81-112 (129)
81 1qxn_A SUD, sulfide dehydrogen 30.6 46 0.0016 23.1 3.5 32 35-69 81-112 (137)
82 1u9y_A RPPK;, ribose-phosphate 29.9 79 0.0027 25.1 5.2 43 30-72 41-86 (284)
83 3e17_A Tight junction protein 29.3 99 0.0034 19.5 4.7 38 34-72 41-78 (88)
84 3exc_X Uncharacterized protein 28.9 89 0.0031 20.7 4.5 67 36-117 3-71 (91)
85 2k0z_A Uncharacterized protein 27.8 79 0.0027 20.8 4.2 31 35-69 55-85 (110)
86 1vee_A Proline-rich protein fa 27.7 56 0.0019 22.4 3.5 32 35-69 73-104 (134)
87 3eod_A Protein HNR; response r 27.6 1.1E+02 0.0039 19.5 4.9 31 33-66 4-34 (130)
88 2vdc_G Glutamate synthase [NAD 27.5 94 0.0032 26.1 5.4 35 34-72 262-296 (456)
89 3d1p_A Putative thiosulfate su 26.8 76 0.0026 21.6 4.1 32 35-69 90-121 (139)
90 3mm4_A Histidine kinase homolo 26.5 1.2E+02 0.0041 21.8 5.4 34 33-69 58-91 (206)
91 3h1g_A Chemotaxis protein CHEY 26.4 80 0.0028 20.4 4.0 33 34-69 3-35 (129)
92 3s5j_B Ribose-phosphate pyroph 26.3 1.4E+02 0.0049 24.4 6.2 43 30-72 44-90 (326)
93 2ji4_A Phosphoribosyl pyrophos 25.4 1.1E+02 0.0036 25.6 5.3 42 30-71 73-118 (379)
94 1wv9_A Rhodanese homolog TT165 24.8 1.1E+02 0.0037 19.3 4.3 29 37-69 54-82 (94)
95 3olh_A MST, 3-mercaptopyruvate 24.6 79 0.0027 24.9 4.2 36 35-70 106-141 (302)
96 2d92_A INAD-like protein; PDZ 23.3 1.6E+02 0.0054 19.1 5.2 41 33-73 63-103 (108)
97 3f6p_A Transcriptional regulat 22.5 1.4E+02 0.0048 18.9 4.6 27 36-65 2-28 (120)
98 1pjq_A CYSG, siroheme synthase 22.2 98 0.0034 26.1 4.6 36 27-66 3-38 (457)
99 2z0l_A EA-D, BMRF1, early anti 22.1 90 0.0031 25.8 4.1 88 45-135 169-269 (318)
100 1e0c_A Rhodanese, sulfurtransf 21.9 1.1E+02 0.0039 23.2 4.6 34 34-70 79-113 (271)
101 3gd5_A Otcase, ornithine carba 21.8 1.6E+02 0.0053 24.2 5.5 31 32-65 153-183 (323)
102 3don_A Shikimate dehydrogenase 21.3 63 0.0022 25.7 3.0 35 32-70 113-147 (277)
103 3flh_A Uncharacterized protein 21.0 1.1E+02 0.0038 20.5 3.9 31 35-69 70-102 (124)
104 3gl9_A Response regulator; bet 21.0 1.6E+02 0.0053 18.8 4.6 26 37-65 3-28 (122)
105 2egg_A AROE, shikimate 5-dehyd 21.0 1.5E+02 0.0053 23.3 5.3 34 33-70 138-171 (297)
106 2gcu_A Putative hydroxyacylglu 20.3 1.7E+02 0.006 22.0 5.3 34 37-73 28-61 (245)
107 3c19_A Uncharacterized protein 20.3 67 0.0023 24.6 2.8 29 42-72 19-48 (186)
No 1
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.96 E-value=1.1e-29 Score=224.62 Aligned_cols=151 Identities=38% Similarity=0.585 Sum_probs=136.1
Q ss_pred CCCccccceeeCCChhhhcccCceeeccccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecce
Q 045545 2 NTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCY 81 (158)
Q Consensus 2 ~~n~~~~r~~~~~~~k~R~~~~~~~~~~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~ 81 (158)
+||+|.+|+++++++.+|..+++.++.+..++++||+||||||+++||+|+.++++.|+++||++|++++++||+..||+
T Consensus 325 ~k~r~~~~t~i~~~~~~R~~~v~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~p~~ 404 (504)
T 1ecf_A 325 VKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNV 404 (504)
T ss_dssp EECSCCCCCCCCSSSCCCCCCSTTTEEECGGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCCCCSCCC
T ss_pred EEecccCCceeCccHHHHHHHHHhhhccccccCCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEecCcccCCe
Confidence 68999999999988888877776666555678999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCHHHHHhcCccchhhheeeccCcccccChHHHHHHhcCCC---CCcccccccCcCCcC-cchhhhhhcc
Q 045545 82 YGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDS---QNFCYACFSGKYPVK-PEEMKVKRVG 152 (158)
Q Consensus 82 ~gi~~~~~~eli~~~~~~~~i~~~i~tdsi~~~sl~~l~~~~~~~~---~~~~~~cf~~~y~~~-~~~~~~~~~~ 152 (158)
+|++.++..+++..+.+.+++.+.++.|++.++|+++|+++++... .++|++||+|+||++ +++.+++.|.
T Consensus 405 ~gi~~~~~~~lv~~~~~~~e~~~~~~~~~l~~~s~~~l~~~~~~~~~~~~~~~~~cf~g~y~~~~~~~~~~~~~~ 479 (504)
T 1ecf_A 405 YGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLD 479 (504)
T ss_dssp SSCCCCCGGGCTTTTCCHHHHHHHHTCSEEEECCHHHHHHHHHTTCTTCCCCBCHHHHCCCTTSCCCHHHHHHHH
T ss_pred EEEEcCChHHeEEcCCCHHHHHHHcCCCEEEEEcHHHHHHHhccCCCccCCccceeCCCCCcCCCCCHHHHHHHH
Confidence 9999999889998888878899999999999999999999997642 379999999999999 8887776654
No 2
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.96 E-value=1e-29 Score=222.31 Aligned_cols=144 Identities=56% Similarity=0.932 Sum_probs=130.1
Q ss_pred CCCccccceeeCCChhhhcccCceeeccccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecce
Q 045545 2 NTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCY 81 (158)
Q Consensus 2 ~~n~~~~r~~~~~~~k~R~~~~~~~~~~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~ 81 (158)
.|++|.+|+++.+++.+|..+.+.++....++++||+||||||++|||+|+.++++.|+++||++|++++++||...+|+
T Consensus 304 ~k~r~~~~~~~~~~~~~R~~~~~~~~~~~~~~v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~pp~~~~~~ 383 (459)
T 1ao0_A 304 IKNRYVGRTFIQPSQALREQGVRMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIAHPCF 383 (459)
T ss_dssp EECTTCCTTSCCCCHHHHHHTCCSSEEECHHHHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSCCCCSCCC
T ss_pred EEecCCCccccCCCHHHHHhhhhhhcccccccCCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEecCCccccce
Confidence 58899999999999999987777666555578999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCHHHHHhcCccchhhheeeccCcccccChHHHHHHhcCCC----CCcccccccCcCCcCcch
Q 045545 82 YGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDS----QNFCYACFSGKYPVKPEE 145 (158)
Q Consensus 82 ~gi~~~~~~eli~~~~~~~~i~~~i~tdsi~~~sl~~l~~~~~~~~----~~~~~~cf~~~y~~~~~~ 145 (158)
+|++.++..+++..+.+.++|++.+++|+++++|+++|++++++.. .++|++||+|+||+++++
T Consensus 384 ~gid~~~~~~li~~~~~~~~i~~~~~~~~l~~~s~~~l~~~~~~~~~~~~~~~c~~cf~g~y~~~~~~ 451 (459)
T 1ao0_A 384 YGIDTSTHEELIASSHSVEEIRQEIGADTLSFLSVEGLLKGIGRKYDDSNCGQCLACFTGKYPTEIYQ 451 (459)
T ss_dssp SCTTTCCSSCCSTTTSCHHHHHHHHTCSEEEECCHHHHHHHHTCCCSSTTTTEECHHHHSCCSSCCCS
T ss_pred eeecCCCHHHhhccCCCHHHHHHHhCcCEEEEEcHHHHHHHhcCcccCcCCCccceeCCCCccCCCCh
Confidence 9999888888888877778999999999999999999999998742 379999999999998754
No 3
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.60 E-value=1.6e-15 Score=126.00 Aligned_cols=91 Identities=25% Similarity=0.253 Sum_probs=76.8
Q ss_pred hhhcccCceeeccccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcC
Q 045545 17 KIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNR 96 (158)
Q Consensus 17 k~R~~~~~~~~~~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~ 96 (158)
|+|......+.....++++||+|+||||+++||+|+.++++.|+++|+++|++ .++||++++++.+++ .
T Consensus 184 K~r~~~g~v~i~~~~~dv~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga~~v~~---------~~th~v~s~~a~~~l-~- 252 (286)
T 3lrt_A 184 KKRIDDRTVEMKVPNVDVNGKKLLIVDDIISTGGTIAKSSGLLREKGASKIYV---------SAVHGLFVNGSENKI-L- 252 (286)
T ss_dssp EEEETTEEEEEEESCCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEE---------EEEEECCCTTHHHHH-T-
T ss_pred eeecCCCcEEEeeccccCCcCEEEEEeccccccHHHHHHHHHHHhCCCCEEEE---------EEEEeecCchHHHHH-H-
Confidence 44533333344345678999999999999999999999999999999999997 689999999999988 6
Q ss_pred ccchhhheeeccCcccc----cChHHHHH
Q 045545 97 MSVEEIREFIGCDSLAF----LLIDSLNK 121 (158)
Q Consensus 97 ~~~~~i~~~i~tdsi~~----~sl~~l~~ 121 (158)
+.+++++.|||+|+ +|++++++
T Consensus 253 ---s~i~~vv~Tntip~~~~~~sva~lla 278 (286)
T 3lrt_A 253 ---QNADEIHVTDTVESKFSDISVYQEVC 278 (286)
T ss_dssp ---TTCSEEEEESSSCSTTEEECCHHHHH
T ss_pred ---cCCCEEEEecCCCCCceEEEhHHHHH
Confidence 68999999999996 77777776
No 4
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.60 E-value=1.6e-15 Score=127.88 Aligned_cols=85 Identities=25% Similarity=0.341 Sum_probs=62.8
Q ss_pred hhhhcccCceeeccccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhc
Q 045545 16 QKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISN 95 (158)
Q Consensus 16 ~k~R~~~~~~~~~~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~ 95 (158)
.|.|..........+.++++||+|+||||+++||+|+.++++.|+++||++|++ .++||++++++.+++..
T Consensus 196 ~K~r~~~~~v~~~~i~g~v~gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~---------~~tH~v~s~~a~~~l~~ 266 (319)
T 3dah_A 196 DKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFA---------YATHPVLSGGAADRIAA 266 (319)
T ss_dssp -------------------CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEE---------EEEEECCCTTHHHHHHT
T ss_pred EEEeccCCceEEEEccccCCCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEE---------EEEeecCChHHHHHHHh
Confidence 455544333333355688999999999999999999999999999999999996 78999999999999987
Q ss_pred CccchhhheeeccCcccc
Q 045545 96 RMSVEEIREFIGCDSLAF 113 (158)
Q Consensus 96 ~~~~~~i~~~i~tdsi~~ 113 (158)
+.+++++.|||+|+
T Consensus 267 ----~~i~~vv~t~tip~ 280 (319)
T 3dah_A 267 ----SALDELVVTDTIPL 280 (319)
T ss_dssp ----SSCSEEEEESSSCC
T ss_pred ----CCCCEEEEeccccC
Confidence 78999999999996
No 5
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.60 E-value=1.5e-15 Score=127.64 Aligned_cols=80 Identities=31% Similarity=0.420 Sum_probs=71.6
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeecc
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGC 108 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~t 108 (158)
.+.++++||+|+||||++|||+|+.++++.|+++||++|++ .++||++++++.+++.. +.+++++.|
T Consensus 210 ~l~~~v~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~---------~~tH~v~~~~a~~~l~~----~~i~~vv~t 276 (317)
T 1dku_A 210 NIVGNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYA---------CCTHPVLSGPAVERINN----STIKELVVT 276 (317)
T ss_dssp EEESCCTTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEE---------ECSEECCCTTHHHHHHT----SSEEEEEEE
T ss_pred EecccCCCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEE---------EEECcccChHHHHHHhh----CCCCEEEEe
Confidence 34578999999999999999999999999999999999996 68899999999998876 689999999
Q ss_pred Ccccc-----------cChHHHHH
Q 045545 109 DSLAF-----------LLIDSLNK 121 (158)
Q Consensus 109 dsi~~-----------~sl~~l~~ 121 (158)
||+|+ +|++++++
T Consensus 277 ~tip~~~~~~~~k~~~~~va~~~a 300 (317)
T 1dku_A 277 NSIKLPEEKKIERFKQLSVGPLLA 300 (317)
T ss_dssp TTSCC----CCSSEEEECCHHHHH
T ss_pred CCcCcchhhcCCCeEEEEhHHHHH
Confidence 99986 56666665
No 6
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.58 E-value=2.3e-15 Score=127.19 Aligned_cols=92 Identities=17% Similarity=0.135 Sum_probs=74.7
Q ss_pred hhhcccCceeeccccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcC
Q 045545 17 KIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNR 96 (158)
Q Consensus 17 k~R~~~~~~~~~~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~ 96 (158)
|+|....+.....+.++++||+|+||||+++||+|+.++++.|+++||++|++ .++||++++++.+++..
T Consensus 194 K~r~~~~~v~~~~l~g~v~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~---------~~tH~v~~~~a~e~l~~- 263 (326)
T 3s5j_B 194 KERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYA---------ILTHGIFSGPAISRINN- 263 (326)
T ss_dssp EC-------CCEEEESCCTTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEE---------EEEEECCCTTHHHHHHH-
T ss_pred EEecCCCeeeEEeccccCCCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEE---------EEEecccCchHHHHHhh-
Confidence 45543333322345789999999999999999999999999999999999996 68999999999999986
Q ss_pred ccchhhheeeccCcccc------------cChHHHHH
Q 045545 97 MSVEEIREFIGCDSLAF------------LLIDSLNK 121 (158)
Q Consensus 97 ~~~~~i~~~i~tdsi~~------------~sl~~l~~ 121 (158)
+.++++++|||+|+ +|++++++
T Consensus 264 ---~~i~~vv~t~tip~~~~~~~~~k~~~lsva~lla 297 (326)
T 3s5j_B 264 ---ACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILA 297 (326)
T ss_dssp ---SCCSEEEEETTSCCHHHHHTCTTEEEECCHHHHH
T ss_pred ---CCCCEEEEecCCCChhhhccCCCeEEEEcHHHHH
Confidence 78999999999985 57777776
No 7
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.57 E-value=3.2e-15 Score=123.75 Aligned_cols=79 Identities=25% Similarity=0.341 Sum_probs=70.2
Q ss_pred ccc-cCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeecc
Q 045545 30 VTG-VLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGC 108 (158)
Q Consensus 30 ~~~-~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~t 108 (158)
+.+ +++||+|+||||++|||+|+.++++.|+++||++|++ .++||++++++.+++.. +.+++++.|
T Consensus 198 l~g~~v~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~---------~~~h~v~s~~a~~~l~~----~~i~~vv~t 264 (284)
T 1u9y_A 198 PKTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIA---------ACVHPVLIGDALNKLYS----AGVEEVVGT 264 (284)
T ss_dssp BSSCCCTTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEE---------EEEECCCCTTHHHHHHH----HTCSEEEEE
T ss_pred ecCccCCCCEEEEEecccCchHHHHHHHHHHHHCCCcEEEE---------EEEeEecCcHHHHHHHh----CCCCEEEEe
Confidence 344 8999999999999999999999999999999999997 67899999999999886 679999999
Q ss_pred Ccccc----cChHHHHH
Q 045545 109 DSLAF----LLIDSLNK 121 (158)
Q Consensus 109 dsi~~----~sl~~l~~ 121 (158)
||+|+ +|++++++
T Consensus 265 ~ti~~~~~~~~va~~~a 281 (284)
T 1u9y_A 265 DTYLSEVSKVSVAEVIV 281 (284)
T ss_dssp TTSCCTTEEECCHHHHH
T ss_pred CCCCcCcEEEEhHHHHH
Confidence 99974 66666664
No 8
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.48 E-value=7.8e-14 Score=119.81 Aligned_cols=79 Identities=22% Similarity=0.286 Sum_probs=70.7
Q ss_pred ccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeeccC
Q 045545 30 VTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCD 109 (158)
Q Consensus 30 ~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~td 109 (158)
+.++++||+||||||+++||+|+.++++.|+++||++|++ .++||++++++.+++.. +.++++++||
T Consensus 266 l~g~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~---------~~tH~v~s~~a~~~l~~----s~id~vvvTn 332 (379)
T 2ji4_A 266 VVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFV---------MATHGLLSSDAPRRIEE----SAIDEVVVTN 332 (379)
T ss_dssp EESCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEE---------EEEEECCCTTHHHHHHH----SSCCEEEEES
T ss_pred cccCCCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEE---------EEEeecCCcHHHHHHHh----CCCCEEEEec
Confidence 4578999999999999999999999999999999999996 68999999999999986 6799999999
Q ss_pred cccc------------cChHHHHH
Q 045545 110 SLAF------------LLIDSLNK 121 (158)
Q Consensus 110 si~~------------~sl~~l~~ 121 (158)
|+|+ +|++++++
T Consensus 333 tip~~~~~~~~~k~~~~sva~lla 356 (379)
T 2ji4_A 333 TIPHEVQKLQCPKIKTVDISMILS 356 (379)
T ss_dssp SSCCHHHHHTCTTEEEECCHHHHH
T ss_pred CCCCchhhcccCCcEEEEhHHHHH
Confidence 9975 46666665
No 9
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.26 E-value=1.5e-11 Score=94.38 Aligned_cols=60 Identities=22% Similarity=0.378 Sum_probs=52.2
Q ss_pred ccccCCCCEEEEEeccccccHHHHHHHHHHHHcC-CcEEEEEeec--C---CceecceeeecCCCH
Q 045545 30 VTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAG-AKEVHMRIAS--P---PIIASCYYGVDTPSS 89 (158)
Q Consensus 30 ~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~G-a~~V~v~v~~--~---~~~~~~~~gi~~~~~ 89 (158)
+..+++||+||||||++|||+|+.++++.|+++| +++|+++++. + +-+.++|+|+..++.
T Consensus 92 ~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~~~~~~~~~dy~g~~ip~~ 157 (181)
T 1a3c_A 92 IPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTS 157 (181)
T ss_dssp CSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCCCSSSCCCSEEEEECCCC
T ss_pred cCcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccCCCcCCCCccEEEEECCCC
Confidence 3467899999999999999999999999999997 9999999885 1 225789999998864
No 10
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.22 E-value=1.6e-11 Score=91.60 Aligned_cols=59 Identities=32% Similarity=0.462 Sum_probs=50.9
Q ss_pred ccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecC---CceecceeeecCCC
Q 045545 30 VTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASP---PIIASCYYGVDTPS 88 (158)
Q Consensus 30 ~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~---~~~~~~~~gi~~~~ 88 (158)
...+++||+|+||||++|||+|+.++++.|+++|+++|.+++++. .-..++|+|+..++
T Consensus 77 ~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~~~~~~dy~g~~~~~ 138 (153)
T 1vdm_A 77 IHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWTSVVPDYYVFRTEK 138 (153)
T ss_dssp CCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTTCSSCCSBBCEECSS
T ss_pred CCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCCCceEEEEecCC
Confidence 346789999999999999999999999999999999999988851 12348999998876
No 11
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.19 E-value=4e-11 Score=92.14 Aligned_cols=60 Identities=25% Similarity=0.408 Sum_probs=51.6
Q ss_pred ccccCCCCEEEEEeccccccHHHHHHHHHHHHcC-CcEEEEEeec--C---CceecceeeecCCCH
Q 045545 30 VTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAG-AKEVHMRIAS--P---PIIASCYYGVDTPSS 89 (158)
Q Consensus 30 ~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~G-a~~V~v~v~~--~---~~~~~~~~gi~~~~~ 89 (158)
+..+++||+||||||++|||+|+.++++.|+++| +++|+++++. + .-+.++++|+..++.
T Consensus 90 ~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~~~~~~~~~d~~g~~i~~~ 155 (181)
T 1ufr_A 90 IPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRGHRELPIRADFVGKNVPTS 155 (181)
T ss_dssp ECSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCCCSSSBCCSEEEEECCCC
T ss_pred cCcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCCCCcCCccCcEEEEeCCCC
Confidence 3467899999999999999999999999999999 9999998885 1 125789999988754
No 12
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.16 E-value=7e-11 Score=92.82 Aligned_cols=65 Identities=20% Similarity=0.401 Sum_probs=51.4
Q ss_pred cccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeeccCc
Q 045545 31 TGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDS 110 (158)
Q Consensus 31 ~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~tds 110 (158)
..+++||+||||||+++||+|+.++++.|+++||++|+++++ ++.+++.+.+.. .. +++++++
T Consensus 115 ~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~-----------v~~~~~~~~l~~----~~--~~v~~~~ 177 (208)
T 1wd5_A 115 KAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVP-----------VASPEAVERLKA----RA--EVVALSV 177 (208)
T ss_dssp CCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEE-----------EBCHHHHHHHHT----TS--EEEEEEC
T ss_pred CCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEE-----------EcCHHHHHHhcc----cC--cEEEEec
Confidence 467899999999999999999999999999999999998653 555555565543 22 6777766
Q ss_pred cc
Q 045545 111 LA 112 (158)
Q Consensus 111 i~ 112 (158)
.+
T Consensus 178 ~~ 179 (208)
T 1wd5_A 178 PQ 179 (208)
T ss_dssp CT
T ss_pred Cc
Confidence 43
No 13
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.16 E-value=5.1e-11 Score=95.17 Aligned_cols=67 Identities=13% Similarity=0.180 Sum_probs=55.8
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--C----CceecceeeecCCCHHHHHhcC
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--P----PIIASCYYGVDTPSSEELISNR 96 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~----~~~~~~~~gi~~~~~~eli~~~ 96 (158)
.+..+++||+||||||+++||+|+.++++.|+++||++|+++++. | +.+.++++|+..++. .++..+
T Consensus 96 ~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~~~~~~~~~dy~g~~ip~~-fvvgyg 168 (220)
T 1tc1_A 96 DTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNA-FVIGYG 168 (220)
T ss_dssp CCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTCCSSCCCCSEEEEECCSC-EEEBTT
T ss_pred CCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccCcCCCCCCEEEEECCch-heeEcc
Confidence 345678999999999999999999999999999999999999985 3 225789999999876 444333
No 14
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.11 E-value=1.1e-10 Score=92.45 Aligned_cols=60 Identities=15% Similarity=0.265 Sum_probs=52.2
Q ss_pred ccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--C----CceecceeeecCCCH
Q 045545 30 VTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--P----PIIASCYYGVDTPSS 89 (158)
Q Consensus 30 ~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~----~~~~~~~~gi~~~~~ 89 (158)
+..+++||+||||||+++||+|+.++++.|+++||++|.++++. | ..+.++++|+..++.
T Consensus 112 ~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~~~~~~~~d~~g~~ip~~ 177 (211)
T 1pzm_A 112 VRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSGRKVDVLVDYPVITIPRA 177 (211)
T ss_dssp CSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCSEEEEECCSC
T ss_pred CCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCccCcCCCCCCEEEEECCCC
Confidence 34678999999999999999999999999999999999999885 2 125689999998874
No 15
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.11 E-value=1.5e-10 Score=89.21 Aligned_cols=60 Identities=20% Similarity=0.257 Sum_probs=51.1
Q ss_pred ccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--CC-----ceecceeeecCCCH
Q 045545 30 VTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--PP-----IIASCYYGVDTPSS 89 (158)
Q Consensus 30 ~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~~-----~~~~~~~gi~~~~~ 89 (158)
..++++||+||||||+++||+|+.++++.|+++|+++|+++++. +. ...++++|+..++.
T Consensus 89 ~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~g~~~~~~~~d~~g~~~p~~ 155 (183)
T 1hgx_A 89 LKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDIGKKAYDVPIDYCGFVVENR 155 (183)
T ss_dssp CSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCSSCSSCCCCSEEEEEECSS
T ss_pred CCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCcccccCCCCCCEEEEEeCCe
Confidence 35679999999999999999999999999999999999998873 22 24578899888764
No 16
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.10 E-value=2.3e-10 Score=89.94 Aligned_cols=58 Identities=22% Similarity=0.463 Sum_probs=50.1
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcC-CcEEEEEeec----C-CceecceeeecCCCH
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAG-AKEVHMRIAS----P-PIIASCYYGVDTPSS 89 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~G-a~~V~v~v~~----~-~~~~~~~~gi~~~~~ 89 (158)
.+++||+||||||+++||+|+.++++.|+++| +++|.++++. . .-+.++|+|+..++.
T Consensus 108 ~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~~~~~pi~~dy~g~~ip~~ 171 (201)
T 1w30_A 108 GGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRGHRELPLRADYVGKNVPTS 171 (201)
T ss_dssp TCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCCCSSSBCCSEEEEECCCC
T ss_pred ccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecCCCcCCCCCcEEEEECCCC
Confidence 34899999999999999999999999999999 9999999883 1 124689999988764
No 17
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.09 E-value=1.5e-10 Score=89.46 Aligned_cols=61 Identities=23% Similarity=0.303 Sum_probs=51.4
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--C----CceecceeeecCCCH
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--P----PIIASCYYGVDTPSS 89 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~----~~~~~~~~gi~~~~~ 89 (158)
...++++||+||||||+++||+|+.++++.|+++||++|.++++. + .-+.++++|+..++.
T Consensus 91 ~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~~~d~~g~~~p~~ 157 (185)
T 2geb_A 91 DHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERREADVKVDYCGFKIPDK 157 (185)
T ss_dssp CCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCCSCCCCSEEEEECCSC
T ss_pred cCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCcccCCCCCCEEEEEcCCC
Confidence 345678999999999999999999999999999999999998884 2 123478999888764
No 18
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.07 E-value=2.7e-10 Score=88.88 Aligned_cols=68 Identities=22% Similarity=0.287 Sum_probs=56.4
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--C----CceecceeeecCCCHHHHHhcCc
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--P----PIIASCYYGVDTPSSEELISNRM 97 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~----~~~~~~~~gi~~~~~~eli~~~~ 97 (158)
.+..+++||+||||||+++||+|+.++++.|+++||++|.++++. | +.+.++|+|+..++ .+++..++
T Consensus 87 ~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~~~~i~~dy~G~~ip~-~fvvGygl 160 (186)
T 3o7m_A 87 DIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRKVDLTAEYVGFQIPD-EFIVGYGI 160 (186)
T ss_dssp CCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCSEEEEECCC-SSEEBTTB
T ss_pred cCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCCCCcCCCCCCEEEEEcCC-CeEEECCC
Confidence 345678999999999999999999999999999999999998883 2 23579999999986 45554444
No 19
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.07 E-value=1e-10 Score=93.31 Aligned_cols=67 Identities=16% Similarity=0.281 Sum_probs=55.2
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--CC----ceecceeeecCCCHHHHHhcCccc
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--PP----IIASCYYGVDTPSSEELISNRMSV 99 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~~----~~~~~~~gi~~~~~~eli~~~~~~ 99 (158)
.+++||+||||||+++||+|+.++++.|+++||++|.++++. |. .+.++++|+..++. .++..+++.
T Consensus 130 ~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~~~~~~~~~dy~g~~ip~~-fvvgygld~ 202 (225)
T 2jbh_A 130 STLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTSRSDGFRPDYAGFEIPNL-FVVGYALDY 202 (225)
T ss_dssp GGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC-CCSCCCCSEEEEEECSS-CCBBTTBCB
T ss_pred cccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccccCCCCccEEEEECCCC-eEEEccccH
Confidence 678999999999999999999999999999999999999884 31 35679999998875 455444433
No 20
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.06 E-value=3.2e-10 Score=87.99 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=54.9
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecC------CceecceeeecCCCHHHHHhcCc
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASP------PIIASCYYGVDTPSSEELISNRM 97 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~------~~~~~~~~gi~~~~~~eli~~~~ 97 (158)
.+.++++||+||||||+++||+|+.++++.|+++|++++.++++.. ..+.++++|+..++. ..+..++
T Consensus 88 ~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~~~~~~~d~~g~~ip~~-fvvGygl 161 (181)
T 2ywu_A 88 DLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRRQVEVPIHYLGFEIEDA-YVYGYGL 161 (181)
T ss_dssp CCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCSEEEEECCSC-CEEBTTB
T ss_pred cCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCCCccCCCCCCEEEEEcCCC-eEEECCC
Confidence 3457799999999999999999999999999999999999988731 235689999998763 3343333
No 21
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.06 E-value=2.3e-10 Score=89.73 Aligned_cols=61 Identities=23% Similarity=0.297 Sum_probs=51.4
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecC-C-----ceecceeeecCCCH
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASP-P-----IIASCYYGVDTPSS 89 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~-~-----~~~~~~~gi~~~~~ 89 (158)
....+++||+||||||+++||+|+.++++.|+++|+++|.++++.. + -+.++++|+..++.
T Consensus 111 ~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~~~d~~g~~~p~~ 177 (205)
T 1yfz_A 111 DHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERREADVKVDYCGFKIPDK 177 (205)
T ss_dssp CCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCCSCCCCSEEEEECCSS
T ss_pred cCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCccccCCCCCCEEEEEcCCc
Confidence 3456789999999999999999999999999999999999988841 1 23478899888764
No 22
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.05 E-value=5e-10 Score=86.11 Aligned_cols=74 Identities=27% Similarity=0.373 Sum_probs=55.9
Q ss_pred cccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecC-CCHHHHHhcCccchhhheeeccC
Q 045545 31 TGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDT-PSSEELISNRMSVEEIREFIGCD 109 (158)
Q Consensus 31 ~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~-~~~~eli~~~~~~~~i~~~i~td 109 (158)
.++++||+|+||||++|||+|+.++++.|+++||+.+.++++ ++. +++.+.+.. .+.+
T Consensus 101 ~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l-----------~~r~~~~~~~l~~----------~g~~ 159 (178)
T 2yzk_A 101 EGDPPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVL-----------VDRGEGAGELLAR----------MGVR 159 (178)
T ss_dssp BTCCCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEE-----------EECCSSHHHHHHT----------TTCE
T ss_pred cccCCCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEE-----------EEcCcCHHHHHHH----------cCCc
Confidence 467899999999999999999999999999999998887664 222 233444432 2344
Q ss_pred cccccChHHHHHHhcC
Q 045545 110 SLAFLLIDSLNKMLGD 125 (158)
Q Consensus 110 si~~~sl~~l~~~~~~ 125 (158)
..+.++++++.+++.+
T Consensus 160 ~~sl~~~~~~~~~~~~ 175 (178)
T 2yzk_A 160 LVSVATLKTILEKLGW 175 (178)
T ss_dssp EEEEEEHHHHHHHTTC
T ss_pred EEEEeeHHHHHHHHHH
Confidence 5566788888887764
No 23
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.04 E-value=1.6e-10 Score=92.76 Aligned_cols=67 Identities=16% Similarity=0.265 Sum_probs=55.0
Q ss_pred cccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--CC----ceecceeeecCCCHHHHHhcCcc
Q 045545 31 TGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--PP----IIASCYYGVDTPSSEELISNRMS 98 (158)
Q Consensus 31 ~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~~----~~~~~~~gi~~~~~~eli~~~~~ 98 (158)
..+++||+||||||+++||+|+.++++.|+++||++|.++++. +. .+.++++|+..++. +++..+++
T Consensus 137 ~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~~~~~~~~~dy~g~~ip~~-fvVgygld 209 (233)
T 1fsg_A 137 LSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTDRSNSLKGDFVGFSIEDV-WIVGCCYD 209 (233)
T ss_dssp GGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCTTCCSCBCSEEEEEECSC-CEEBTTBC
T ss_pred ccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccccCCCCccEEEEEcCCc-ceEEcCcC
Confidence 3678999999999999999999999999999999999999885 31 35689999998764 34444433
No 24
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.03 E-value=5.5e-10 Score=86.38 Aligned_cols=68 Identities=21% Similarity=0.350 Sum_probs=55.1
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--C----CceecceeeecCCCHHHHHhcCc
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--P----PIIASCYYGVDTPSSEELISNRM 97 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~----~~~~~~~~gi~~~~~~eli~~~~ 97 (158)
.+..+++||+||||||+++||+|+.++++.|+++|+++|.++++. | ..+.++++|+..++. ..+..|+
T Consensus 84 ~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~~~~~~~~~d~~g~~~p~~-fvvgygl 157 (177)
T 3ohp_A 84 DLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPTRREVDVEVNWVGFEIPDE-FVVGVGI 157 (177)
T ss_dssp CCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCSEEEEECCSC-CEEBTTB
T ss_pred CCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCccccCCCCccEEEEEcCCC-eEEECCC
Confidence 445778999999999999999999999999999999999988873 2 135789999998863 4443443
No 25
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.03 E-value=6.1e-10 Score=88.25 Aligned_cols=68 Identities=28% Similarity=0.407 Sum_probs=55.6
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--C----CceecceeeecCCCHHHHHhcCc
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--P----PIIASCYYGVDTPSSEELISNRM 97 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~----~~~~~~~~gi~~~~~~eli~~~~ 97 (158)
.+..+++||+||||||+++||+|+.++++.|+++|+++|.++++. | ..+.++++|+..++ ..++..++
T Consensus 109 ~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~~~~~~~Dy~g~~ipd-~fvvGygl 182 (204)
T 3hvu_A 109 DLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGRKVDLKADYVGFTVPH-EFVVGYGL 182 (204)
T ss_dssp CCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGGGCSSCCCCSEEEEECCS-CCEEBTTB
T ss_pred CCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCCCCcCCCCCCEEEEEcCC-CeEEECCC
Confidence 345678999999999999999999999999999999999988873 1 23578999999986 34443443
No 26
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.02 E-value=3.1e-10 Score=91.68 Aligned_cols=75 Identities=21% Similarity=0.333 Sum_probs=56.8
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeeccCcc
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSL 111 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~tdsi 111 (158)
..++|++||||||++|||+|+.++++.|+++|++.+.++++ |....+...+.+.. .+.+-.
T Consensus 133 ~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l---------~~~~~~~~~e~l~~----------~gi~v~ 193 (234)
T 3m3h_A 133 KAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSI---------FTYELEAGKEKLEA----------ANVASY 193 (234)
T ss_dssp CCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEE---------EECCCHHHHHHHHH----------TTCCEE
T ss_pred ccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEE---------EECcCchHHHHHHh----------cCCCEE
Confidence 34699999999999999999999999999999999998543 44433334444432 345556
Q ss_pred cccChHHHHHHhcC
Q 045545 112 AFLLIDSLNKMLGD 125 (158)
Q Consensus 112 ~~~sl~~l~~~~~~ 125 (158)
+.+++++|++++.+
T Consensus 194 sL~~~~dl~~~~~~ 207 (234)
T 3m3h_A 194 SLSDYSALTEVAAE 207 (234)
T ss_dssp ESSCHHHHHHHHHH
T ss_pred EEeeHHHHHHHHHH
Confidence 67888898888754
No 27
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.01 E-value=3.4e-10 Score=91.97 Aligned_cols=75 Identities=16% Similarity=0.244 Sum_probs=56.7
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeeccCcc
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSL 111 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~tdsi 111 (158)
..++||+||||||++|||+|+.++++.|+++|++.+.++++ +....+...+.+.. .+.+-.
T Consensus 145 ~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l---------~d~~~~~a~e~l~~----------~gi~~~ 205 (243)
T 3dez_A 145 RVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAI---------FTYELPKATANFEK----------ASVKLV 205 (243)
T ss_dssp CCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEE---------EECCCHHHHHHHHH----------HTCCEE
T ss_pred ccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEE---------EECCCchHHHHHHh----------cCCCEE
Confidence 34799999999999999999999999999999999998654 22222334444432 244556
Q ss_pred cccChHHHHHHhcC
Q 045545 112 AFLLIDSLNKMLGD 125 (158)
Q Consensus 112 ~~~sl~~l~~~~~~ 125 (158)
+.+++++|++++.+
T Consensus 206 sL~~~~dl~~~~~~ 219 (243)
T 3dez_A 206 TLSNYSELIKVAKV 219 (243)
T ss_dssp ESSCHHHHHHHHHH
T ss_pred EEeeHHHHHHHHHH
Confidence 67888999888764
No 28
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.01 E-value=6e-10 Score=86.45 Aligned_cols=67 Identities=18% Similarity=0.291 Sum_probs=51.6
Q ss_pred CCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeeccCcc
Q 045545 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSL 111 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~tdsi 111 (158)
++||+|+||||++|||+|+.++++.|+++||+.|+++++ +.....+..+++... .-.+..++.+|++
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l---------~~~~~~~~~~~l~~~--~~~~~sl~~~~~i 184 (197)
T 1y0b_A 118 SDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIV---------IEKSFQPGRDELVKL--GYRVESLARIQSL 184 (197)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE---------EEETTSTHHHHHHHT--TCCEEEEEEEEEC
T ss_pred CCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEE---------EEecccchhhhHHhc--CCcEEEEEEEEEe
Confidence 699999999999999999999999999999999998654 223333566666530 0246677777776
No 29
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=98.99 E-value=6.9e-10 Score=84.99 Aligned_cols=39 Identities=33% Similarity=0.368 Sum_probs=36.7
Q ss_pred CCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEee
Q 045545 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~ 72 (158)
++||+|+||||++|||+|+.++++.|+++|++.|+++++
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l 156 (180)
T 1zn8_A 118 EPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSL 156 (180)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEE
Confidence 799999999999999999999999999999999998554
No 30
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=98.97 E-value=6.1e-10 Score=87.60 Aligned_cols=90 Identities=16% Similarity=0.314 Sum_probs=63.1
Q ss_pred CCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeeccCcccc
Q 045545 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAF 113 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~tdsi~~ 113 (158)
.+||+|+||||++|||+|+.++++.|+++|++.|.++++. ... .+..+.+.. .+.+-.+.
T Consensus 109 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~---------~~~-~~~~~~l~~----------~g~~v~sl 168 (205)
T 2wns_A 109 NPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLL---------DRE-QGGKDKLQA----------HGIRLHSV 168 (205)
T ss_dssp CTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEE---------ECC-SSHHHHHHT----------TTCEEEEE
T ss_pred CCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEE---------EcC-cchHHHHHH----------cCCeEEEE
Confidence 4899999999999999999999999999999999986652 221 244444432 23344555
Q ss_pred cChHHHHHHhcCCCCCcccccccCcCCcCcchhhhhhccccccC
Q 045545 114 LLIDSLNKMLGDDSQNFCYACFSGKYPVKPEEMKVKRVGEFVDD 157 (158)
Q Consensus 114 ~sl~~l~~~~~~~~~~~~~~cf~~~y~~~~~~~~~~~~~~~~~~ 157 (158)
+++.++.+++.+. | .+.+..+++|.+|.+|
T Consensus 169 ~~~~~~~~~~~~~----------~----~~~~~~~~~~~~~~~~ 198 (205)
T 2wns_A 169 CTLSKMLEILEQQ----------K----KVDAETVGRVKRFIQE 198 (205)
T ss_dssp EEHHHHHHHHHHT----------T----SSCHHHHHHHHHHHHC
T ss_pred EEHHHHHHHHHHc----------C----CCCHHHHHHHHHHHhC
Confidence 6678888777642 1 2466667777766543
No 31
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=98.95 E-value=6.7e-10 Score=88.04 Aligned_cols=69 Identities=17% Similarity=0.281 Sum_probs=56.6
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeecc
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGC 108 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~t 108 (158)
.+..+++||+|+||||+++||+|+.++++.|+++|+++|.++++ +..++..+.+.. ...+..+.|
T Consensus 117 ~lp~~i~~~~VllvDd~l~TG~T~~~a~~~L~~~G~~~I~~~~l-----------v~~~~g~~~l~~----~~p~~~I~t 181 (209)
T 1i5e_A 117 KLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFMCL-----------IAAPEGVKAVET----AHPDVDIYI 181 (209)
T ss_dssp ECCTTTTTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEECS-----------EECHHHHHHHHH----HCTTCEEEE
T ss_pred cCCCccCCCEEEEEcCCCcCHHHHHHHHHHHHHcCCCEEEEEEE-----------EECHHHHHHHHH----hCcCcEEEE
Confidence 34578999999999999999999999999999999999998654 555666666665 455667888
Q ss_pred Cccc
Q 045545 109 DSLA 112 (158)
Q Consensus 109 dsi~ 112 (158)
++|+
T Consensus 182 ~~id 185 (209)
T 1i5e_A 182 AALD 185 (209)
T ss_dssp SEEC
T ss_pred EEeC
Confidence 8885
No 32
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.94 E-value=7.4e-10 Score=84.24 Aligned_cols=39 Identities=28% Similarity=0.398 Sum_probs=37.4
Q ss_pred CCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEee
Q 045545 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~ 72 (158)
++||+|+||||++|||+|+.++++.|+++||++|+++++
T Consensus 118 v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l 156 (175)
T 1vch_A 118 LLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAV 156 (175)
T ss_dssp HTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEE
Confidence 599999999999999999999999999999999998876
No 33
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=98.94 E-value=7.9e-10 Score=87.81 Aligned_cols=59 Identities=24% Similarity=0.345 Sum_probs=50.7
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--C----CceecceeeecCCCHH
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--P----PIIASCYYGVDTPSSE 90 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~----~~~~~~~~gi~~~~~~ 90 (158)
.+++||+||||||+++||+|+.++++.|+++|+++|+++++. + ..+.++++|+..++..
T Consensus 122 ~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~~~~~~~~~dyvg~~~p~~f 186 (217)
T 1z7g_A 122 STLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKF 186 (217)
T ss_dssp GGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC-----CCCSEEEEEECSCC
T ss_pred cccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcccccCCCCCcEEEEEcCCCC
Confidence 678999999999999999999999999999999999988883 2 1357889999887644
No 34
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=98.91 E-value=3.1e-09 Score=82.59 Aligned_cols=61 Identities=20% Similarity=0.298 Sum_probs=53.5
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecC------CceecceeeecCCCH
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASP------PIIASCYYGVDTPSS 89 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~------~~~~~~~~gi~~~~~ 89 (158)
.+..+++||+||||||+++||.|+.++.+.|++.|++++.++++.. .-+.++|.|+..|+.
T Consensus 88 ~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~~~r~~pi~~DyvG~~ipd~ 154 (181)
T 3acd_A 88 DLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRRQVEVPIHYLGFEIEDA 154 (181)
T ss_dssp CCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCSEEEEECCSC
T ss_pred CCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcCccccCCCCCCEEEEECCCc
Confidence 5567899999999999999999999999999999999999999941 236789999999863
No 35
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=98.88 E-value=3.3e-09 Score=83.43 Aligned_cols=41 Identities=22% Similarity=0.366 Sum_probs=37.7
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEee
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~ 72 (158)
..++||+|+||||++|||+|+.++++.|+++|++.|.++++
T Consensus 113 ~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l 153 (211)
T 2aee_A 113 RVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAI 153 (211)
T ss_dssp CCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEE
Confidence 35899999999999999999999999999999999887654
No 36
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=98.87 E-value=3.8e-09 Score=86.20 Aligned_cols=61 Identities=26% Similarity=0.318 Sum_probs=52.1
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--C----CceecceeeecCCCH
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--P----PIIASCYYGVDTPSS 89 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~----~~~~~~~~gi~~~~~ 89 (158)
....+++||+||||||+++||.|+.++++.|+++|+++|.++++. | .-+.++|.|+..++.
T Consensus 149 ~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~~r~~~i~~DyvG~~ipd~ 215 (250)
T 3ozf_A 149 EDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDH 215 (250)
T ss_dssp CCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECCTTCCCCBCSEEEEEECSS
T ss_pred CCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCccccCCCCCcEEEEEcCCC
Confidence 445678999999999999999999999999999999999998883 1 125688999988763
No 37
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=98.84 E-value=5.3e-09 Score=84.04 Aligned_cols=39 Identities=31% Similarity=0.406 Sum_probs=36.6
Q ss_pred CCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEee
Q 045545 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~ 72 (158)
.+||+||||||++|||+|+.++++.|+++|++.|.++++
T Consensus 136 ~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l 174 (236)
T 1qb7_A 136 GKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSI 174 (236)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 589999999999999999999999999999999998654
No 38
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=98.84 E-value=3.7e-09 Score=81.66 Aligned_cols=41 Identities=22% Similarity=0.395 Sum_probs=38.3
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEee
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~ 72 (158)
..++||+|+||||++|||+|+.++++.|+++|+++|+++++
T Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l 158 (187)
T 1g2q_A 118 AIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFV 158 (187)
T ss_dssp SSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 35799999999999999999999999999999999998776
No 39
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=98.84 E-value=3.5e-09 Score=81.94 Aligned_cols=40 Identities=28% Similarity=0.487 Sum_probs=37.4
Q ss_pred cCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEee
Q 045545 33 VLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 33 ~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~ 72 (158)
.++||+||||||++|||+|+.++++.|+++||+.|+++++
T Consensus 123 ~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l 162 (190)
T 2dy0_A 123 IKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFI 162 (190)
T ss_dssp CCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEE
Confidence 4699999999999999999999999999999999998765
No 40
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=98.83 E-value=3.7e-09 Score=81.46 Aligned_cols=40 Identities=35% Similarity=0.536 Sum_probs=37.9
Q ss_pred cCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEee
Q 045545 33 VLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 33 ~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~ 72 (158)
.++||+|+||||++|||+|+.++++.|+++|++.|+++++
T Consensus 111 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l 150 (180)
T 2p1z_A 111 DVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATV 150 (180)
T ss_dssp CCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred CCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEE
Confidence 4799999999999999999999999999999999998776
No 41
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=98.82 E-value=4.6e-09 Score=83.69 Aligned_cols=85 Identities=18% Similarity=0.223 Sum_probs=56.6
Q ss_pred cccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCC-CHHHHHhcCccchhhheeeccC
Q 045545 31 TGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTP-SSEELISNRMSVEEIREFIGCD 109 (158)
Q Consensus 31 ~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~-~~~eli~~~~~~~~i~~~i~td 109 (158)
...++||+||||||++|||+|+.++++.|+++|++.+.++++... ..-|-... +... ..+++.+..+.+
T Consensus 120 ~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr----~~~g~~~~~~~~~------~~~~~~~~~g~~ 189 (226)
T 2ps1_A 120 GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDR----QEVVSTDDKEGLS------ATQTVSKKYGIP 189 (226)
T ss_dssp ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEC----CBBSCTTCSSCCB------HHHHHHHHHTCC
T ss_pred cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEc----cCcccccccccch------HHHHHHHhcCCe
Confidence 356899999999999999999999999999999999998776210 00000000 0000 001111234566
Q ss_pred cccccChHHHHHHhcC
Q 045545 110 SLAFLLIDSLNKMLGD 125 (158)
Q Consensus 110 si~~~sl~~l~~~~~~ 125 (158)
..+.++++++..++.+
T Consensus 190 v~sl~~~~~l~~~~~~ 205 (226)
T 2ps1_A 190 VLSIVSLIHIITYLEG 205 (226)
T ss_dssp EEEEEEHHHHHHHHGG
T ss_pred EEEEecHHHHHHHHHH
Confidence 6777888999888864
No 42
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=98.81 E-value=6.3e-09 Score=83.46 Aligned_cols=69 Identities=23% Similarity=0.344 Sum_probs=55.7
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeecc
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGC 108 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~t 108 (158)
.+..+++||+|+||||+++||+|+.++++.|++.|+++|.++++ +..++..+.+.. ...+..+.|
T Consensus 129 ~lp~di~gr~VilvDd~laTG~Tl~~ai~~L~~~G~~~I~~~~l-----------v~~~~g~~~l~~----~~p~v~I~t 193 (221)
T 1o5o_A 129 KLPPLNDDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLVAL-----------IAAPEGVEAVEK----KYEDVKIYV 193 (221)
T ss_dssp ECCCCCTTCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEECS-----------EECHHHHHHHHH----HCTTCEEEE
T ss_pred cCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEE-----------EeCHHHHHHHHH----HCCCcEEEE
Confidence 45678999999999999999999999999999999999997654 666667777765 444556667
Q ss_pred Cccc
Q 045545 109 DSLA 112 (158)
Q Consensus 109 dsi~ 112 (158)
++|.
T Consensus 194 ~~ID 197 (221)
T 1o5o_A 194 AALD 197 (221)
T ss_dssp SEEC
T ss_pred Eecc
Confidence 6663
No 43
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=98.79 E-value=4.2e-09 Score=81.33 Aligned_cols=39 Identities=23% Similarity=0.316 Sum_probs=37.1
Q ss_pred CCCCEEEEEeccccccHHHHHHHHHHHHcCCc--EEEEEee
Q 045545 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAK--EVHMRIA 72 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~--~V~v~v~ 72 (158)
++||+|+||||++|||+|+.++++.|+++||+ .|.++++
T Consensus 115 ~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l 155 (186)
T 1l1q_A 115 GPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVL 155 (186)
T ss_dssp CTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEE
Confidence 69999999999999999999999999999999 9998765
No 44
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=98.75 E-value=7.4e-09 Score=82.30 Aligned_cols=68 Identities=21% Similarity=0.206 Sum_probs=55.2
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeecc
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGC 108 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~t 108 (158)
.+. +++||+|+||||+++||+|+..+++.|++.|+++|.++++ +..++..+.+.. ...+..+.|
T Consensus 115 ~lp-di~~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~l-----------v~~~~g~~~l~~----~~p~v~I~t 178 (208)
T 2e55_A 115 RLP-ELKGKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHA-----------IAAPEGLKRIEE----KFKEVEIFV 178 (208)
T ss_dssp ECC-CCBTSEEEEECSEESSSHHHHHHHHHHHTTCBSEEEEEEE-----------EECHHHHHHHHH----HCTTSEEEE
T ss_pred CCC-CCCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEE-----------EECHHHHHHHHH----HCCCcEEEE
Confidence 445 8999999999999999999999999999999999998654 566666777765 444556667
Q ss_pred Cccc
Q 045545 109 DSLA 112 (158)
Q Consensus 109 dsi~ 112 (158)
+++.
T Consensus 179 ~~iD 182 (208)
T 2e55_A 179 GNVD 182 (208)
T ss_dssp EEEC
T ss_pred Eeec
Confidence 7764
No 45
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=98.73 E-value=3.7e-09 Score=84.33 Aligned_cols=64 Identities=20% Similarity=0.243 Sum_probs=49.5
Q ss_pred cccCCCCEEEEEeccccccHHHHHHHHHHHH--------cCC---------cEEEEEeecC---------C--ceec--c
Q 045545 31 TGVLEGKRVVVVDDSIVRGTTSSKIVRLLKE--------AGA---------KEVHMRIASP---------P--IIAS--C 80 (158)
Q Consensus 31 ~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~--------~Ga---------~~V~v~v~~~---------~--~~~~--~ 80 (158)
..+++||+||||||+++||.|+.++++.|++ .|+ +++.+++++. | .+.+ +
T Consensus 98 ~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~~~~~~~p~~~i~~~~D 177 (221)
T 2xbu_A 98 KLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQKPKKADLPAEMLNDKNR 177 (221)
T ss_dssp TCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECSCCSSCCCHHHHTCTTT
T ss_pred cccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccccccccCCccccCCCCC
Confidence 4679999999999999999999999999997 786 5888888852 1 0334 8
Q ss_pred eeeecCCCHHHHHh
Q 045545 81 YYGVDTPSSEELIS 94 (158)
Q Consensus 81 ~~gi~~~~~~eli~ 94 (158)
|+|+..++..+.+.
T Consensus 178 y~g~~i~~d~wIvf 191 (221)
T 2xbu_A 178 YFAAKTVPDKWYAY 191 (221)
T ss_dssp EEEEEEECSCCEEC
T ss_pred EEEEEeCCCCEEEc
Confidence 99988743334433
No 46
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=98.69 E-value=2.2e-08 Score=79.61 Aligned_cols=56 Identities=18% Similarity=0.381 Sum_probs=47.5
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhc
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISN 95 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~ 95 (158)
.+..+++||+|+||||+++||+|+.++++.|++.|+++|.++++ +..++..+.+..
T Consensus 116 ~lp~di~~r~VilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~l-----------v~~p~g~~~l~~ 171 (208)
T 2ehj_A 116 KLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVL-----------VAAPEGIAALEK 171 (208)
T ss_dssp ECCSCGGGCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEEEEEE-----------EECHHHHHHHHH
T ss_pred CCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEE-----------EeCHHHHHHHHH
Confidence 45678999999999999999999999999999999999998665 555666666654
No 47
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.68 E-value=9.3e-09 Score=81.72 Aligned_cols=68 Identities=21% Similarity=0.319 Sum_probs=53.6
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeecc
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGC 108 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~t 108 (158)
.+..+++||+|+||||+++||+|+..+++.|++.|+++|.++++ +..++..+.+.. ...+..+.|
T Consensus 116 ~lp~di~~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~l-----------v~~~~g~~~l~~----~~p~v~I~t 180 (208)
T 1v9s_A 116 KLPPDIAERRAFLLDPMLATGGSASLALSLLKERGATGVKLMAI-----------LAAPEGLERIAK----DHPDTEVVV 180 (208)
T ss_dssp ECCSCGGGSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEEEEE-----------EECHHHHHHHHH----HCTTCEEEE
T ss_pred cCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEE-----------EeCHHHHHHHHH----HCCCcEEEE
Confidence 45678999999999999999999999999999999999998654 556666676665 333444555
Q ss_pred Ccc
Q 045545 109 DSL 111 (158)
Q Consensus 109 dsi 111 (158)
+++
T Consensus 181 ~~i 183 (208)
T 1v9s_A 181 AAI 183 (208)
T ss_dssp EEE
T ss_pred Eee
Confidence 554
No 48
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=98.66 E-value=2.4e-08 Score=80.57 Aligned_cols=82 Identities=20% Similarity=0.240 Sum_probs=55.1
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeeccCcc
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSL 111 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~tdsi 111 (158)
..++|++||||||++|||+|+.++++.|+++|++.+.++++ ++.+..-. -...-+.+++.+-.+.+-.
T Consensus 132 ~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vl-----------vdr~e~g~-~~~~~a~~~~~~~~gv~v~ 199 (232)
T 3mjd_A 132 ADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLS-----------IDRQEKAK-DSDISATKKISQDFNIPVL 199 (232)
T ss_dssp SCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEE-----------EECCBCCT-TSSSCHHHHHHHHHCCCEE
T ss_pred cCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEE-----------EECCcCCc-cccchhHHHHHHHcCCcEE
Confidence 37899999999999999999999999999999999998776 22211000 0000000111122455666
Q ss_pred cccChHHHHHHhcC
Q 045545 112 AFLLIDSLNKMLGD 125 (158)
Q Consensus 112 ~~~sl~~l~~~~~~ 125 (158)
+..++++++.++.+
T Consensus 200 sL~~~~~l~~~~~~ 213 (232)
T 3mjd_A 200 AVTNFESIFEYVKE 213 (232)
T ss_dssp EEEEHHHHHHHHHH
T ss_pred EEEeHHHHHHHHHh
Confidence 67788888887763
No 49
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=98.62 E-value=3.2e-08 Score=78.18 Aligned_cols=80 Identities=25% Similarity=0.396 Sum_probs=54.1
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheeeccCcc
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSL 111 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~tdsi 111 (158)
..++| +|+||||++|||+|+.++++.|+++|++.+.++++... ...|-..-++. +++.+..+.+..
T Consensus 114 ~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr----~~~g~~~l~~~---------~~~~~~~g~~v~ 179 (213)
T 1lh0_A 114 SALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDR----QERGRGEISAI---------QEVERDYGCKVI 179 (213)
T ss_dssp SCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEC----CBBCSSSSBHH---------HHHHHHHCCEEE
T ss_pred CCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEc----ccCcccchhhH---------HHHHHHcCCCeE
Confidence 45799 99999999999999999999999999999998776210 00010000000 112222355566
Q ss_pred cccChHHHHHHhcC
Q 045545 112 AFLLIDSLNKMLGD 125 (158)
Q Consensus 112 ~~~sl~~l~~~~~~ 125 (158)
+.++++++..++.+
T Consensus 180 sl~~~~~l~~~~~~ 193 (213)
T 1lh0_A 180 SIITLKDLIAYLEE 193 (213)
T ss_dssp EEEEHHHHHHHHHH
T ss_pred EEEEHHHHHHHHHH
Confidence 67888888888764
No 50
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=98.58 E-value=3.2e-08 Score=80.16 Aligned_cols=79 Identities=25% Similarity=0.447 Sum_probs=56.5
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCH-HHHHhcCccchhhheeeccCc
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSS-EELISNRMSVEEIREFIGCDS 110 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~-~eli~~~~~~~~i~~~i~tds 110 (158)
..++| +|+||||++|||+|+.++++.|+++|++.+.++++ ++.+.. .+.+ ...+.+.+-.|.+.
T Consensus 139 ~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vl-----------vdr~egG~~~l---~a~~~~~~~~Gv~v 203 (238)
T 3n2l_A 139 SKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVA-----------IDRQEKGKGEL---SAIQEVERDFGCAV 203 (238)
T ss_dssp SCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEE-----------EECCCBCSSSS---BHHHHHHHHHCCEE
T ss_pred cccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEE-----------EEcccCccchh---hHHHHHHHHcCCCE
Confidence 46799 99999999999999999999999999999998765 332210 0000 00122322356666
Q ss_pred ccccChHHHHHHhcC
Q 045545 111 LAFLLIDSLNKMLGD 125 (158)
Q Consensus 111 i~~~sl~~l~~~~~~ 125 (158)
.+..+++++++++.+
T Consensus 204 ~SL~~~~~l~~~~~~ 218 (238)
T 3n2l_A 204 ISIVSLTDLITYLEQ 218 (238)
T ss_dssp EEEEEHHHHHHHHHS
T ss_pred EEEEEHHHHHHHHHH
Confidence 777889999998875
No 51
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=98.57 E-value=4.5e-08 Score=81.13 Aligned_cols=40 Identities=25% Similarity=0.419 Sum_probs=37.6
Q ss_pred cCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEee
Q 045545 33 VLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 33 ~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~ 72 (158)
.++|++||||||++|||+|+.++++.|+++||+.|.++++
T Consensus 193 l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vl 232 (291)
T 1o57_A 193 MKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVL 232 (291)
T ss_dssp SCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEE
T ss_pred CCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEE
Confidence 3689999999999999999999999999999999998776
No 52
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=98.51 E-value=1.7e-07 Score=82.10 Aligned_cols=88 Identities=23% Similarity=0.373 Sum_probs=62.8
Q ss_pred CCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecC-CCHHHHHhcCccchhhheeeccCccc
Q 045545 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDT-PSSEELISNRMSVEEIREFIGCDSLA 112 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~-~~~~eli~~~~~~~~i~~~i~tdsi~ 112 (158)
.+|++|+||||++|||+|+.++++.|+++|++.+.++++ ++. ....+.+. + .+.+..+
T Consensus 363 ~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~l-----------vdr~~~g~~~l~---------~-~g~~v~s 421 (453)
T 3qw4_B 363 KKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVL-----------VDRDMGAKAFLN---------K-LGYDFEA 421 (453)
T ss_dssp CTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEE-----------EECSSSHHHHHH---------H-TTCCEEE
T ss_pred CCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEE-----------EECCcchHHHHH---------h-cCCCEEE
Confidence 589999999999999999999999999999999998765 221 12333332 1 3555566
Q ss_pred ccChHHHHHHhcCCCCCcccccccCcCCcCcchhhhhhcccccc
Q 045545 113 FLLIDSLNKMLGDDSQNFCYACFSGKYPVKPEEMKVKRVGEFVD 156 (158)
Q Consensus 113 ~~sl~~l~~~~~~~~~~~~~~cf~~~y~~~~~~~~~~~~~~~~~ 156 (158)
.++++++++.+.+- | .+.+..++++.+|..
T Consensus 422 L~~~~dl~~~~~~~----------~----~i~~~~~~~~~~~~~ 451 (453)
T 3qw4_B 422 VVGLHQLLPLWRKS----------N----AITSQQEADVRAFLG 451 (453)
T ss_dssp EEEHHHHHHHTTTT----------T----CSCHHHHHHHHHHHT
T ss_pred EeEHHHHHHHHHHc----------C----CCCHHHHHHHHHHHh
Confidence 78889999888751 1 234556677766654
No 53
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.48 E-value=1.1e-07 Score=77.28 Aligned_cols=56 Identities=13% Similarity=0.219 Sum_probs=46.9
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCC--cEEEEEeecCCceecceeeecCCCHHHHHhc
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGA--KEVHMRIASPPIIASCYYGVDTPSSEELISN 95 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga--~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~ 95 (158)
.+..+++||+|+||||+++||+|+..+++.|++.|+ ++|.++++ +..++..+.+..
T Consensus 149 ~lp~di~~r~VilvDdmlaTG~T~~~ai~~L~~~G~~p~~I~~~~l-----------vaap~g~~~l~~ 206 (243)
T 1bd3_D 149 KLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNI-----------LAAPQGIERVFK 206 (243)
T ss_dssp ECCTTGGGSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGEEEEEE-----------EECHHHHHHHHH
T ss_pred cCCcccCCCEEEEECCccccHHHHHHHHHHHHHcCCCcceEEEEEE-----------EeCHHHHHHHHH
Confidence 456789999999999999999999999999999999 89988665 455555666654
No 54
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=98.46 E-value=2.9e-08 Score=74.43 Aligned_cols=58 Identities=22% Similarity=0.251 Sum_probs=42.7
Q ss_pred cCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec--C-CceecceeeecCCCHHHHHhc
Q 045545 33 VLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS--P-PIIASCYYGVDTPSSEELISN 95 (158)
Q Consensus 33 ~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~--~-~~~~~~~~gi~~~~~~eli~~ 95 (158)
+++||+||||||+++||+|+.++++.|++ +.++++. + .-..|+|+|...++..+....
T Consensus 78 ~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~~~~~~pDy~~~~~~~~~wi~fp 138 (152)
T 1nul_A 78 EGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQP 138 (152)
T ss_dssp SSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGGGGGGCSEEEEECCTTCEEECG
T ss_pred CCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECCCCccCCcEEEEEcCCCCEEEcC
Confidence 57999999999999999999999999986 4444442 1 124578888877654444433
No 55
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=98.26 E-value=2.6e-07 Score=74.29 Aligned_cols=63 Identities=21% Similarity=0.287 Sum_probs=46.6
Q ss_pred ccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec-CC-------ceecc---eeeec-CCCHHHHHhcCc
Q 045545 30 VTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS-PP-------IIASC---YYGVD-TPSSEELISNRM 97 (158)
Q Consensus 30 ~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~-~~-------~~~~~---~~gi~-~~~~~eli~~~~ 97 (158)
+..+++||+||||||+++||.|+.++++.|++ |.++++. .| .+.++ ++|+. .|++...+..|+
T Consensus 112 l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~~~~r~~~i~~D~~~yvg~~~ipd~~fvVGygl 186 (230)
T 1dqn_A 112 LKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDVDAIKKHSALADTKMFYGYTPMPKGSWLIGFGL 186 (230)
T ss_dssp HHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCHHHHHTSTTTTTCCEEEEECCCCTTCCEEBTTB
T ss_pred CccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCccccccCCcCCCCceEEEEEECCCCCeEEEcCc
Confidence 34679999999999999999999999999988 5555552 22 24577 89998 776333443333
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.18 E-value=1.3e-06 Score=69.81 Aligned_cols=43 Identities=16% Similarity=0.332 Sum_probs=39.0
Q ss_pred cccccCCCCEEEEEeccccccHHHHHHHHHHHHcCC--cEEEEEee
Q 045545 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGA--KEVHMRIA 72 (158)
Q Consensus 29 ~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga--~~V~v~v~ 72 (158)
.+. +++||.|+|+||++.||+|+.++++.|++.|+ ++|.++++
T Consensus 123 ~lP-~i~~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~~~~~ 167 (217)
T 3dmp_A 123 RLP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLAL 167 (217)
T ss_dssp ECC-CCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEECS
T ss_pred cCC-CCCCCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEEEEEE
Confidence 345 89999999999999999999999999999999 88888654
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=97.88 E-value=1.3e-05 Score=63.88 Aligned_cols=42 Identities=17% Similarity=0.269 Sum_probs=37.7
Q ss_pred cccccCCCC--EEEEEeccccccHHHHHHHHHHHHcCC-cEEEEEee
Q 045545 29 PVTGVLEGK--RVVVVDDSIVRGTTSSKIVRLLKEAGA-KEVHMRIA 72 (158)
Q Consensus 29 ~~~~~v~gk--~vliVDDvi~TG~Tl~~~~~~L~~~Ga-~~V~v~v~ 72 (158)
.+. ++++| .|+|+||++.||+|+.++++.|++ |+ ++|.++++
T Consensus 125 klP-~i~~~~~~VilvDp~laTG~T~~~ai~~L~~-G~p~~I~~~~~ 169 (216)
T 1xtt_A 125 KIP-DIRAKVDNVIIADPMIATASTMLKVLEEVVK-ANPKRIYIVSI 169 (216)
T ss_dssp ECC-CCCTTTCEEEEECSEESSSHHHHHHHHHHGG-GCCSEEEEECS
T ss_pred cCC-CccCCcceEEEEcCCccchHHHHHHHHHHHh-CCCCeEEEEEE
Confidence 344 89999 999999999999999999999999 99 88888654
No 58
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=86.22 E-value=0.3 Score=33.32 Aligned_cols=60 Identities=22% Similarity=0.282 Sum_probs=42.4
Q ss_pred CHHHHHhcCccchhhheeeccCcccccChHHHHHHhcCCCCC---cccccccCcC-CcCcchhhhhhccccc
Q 045545 88 SSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDSQN---FCYACFSGKY-PVKPEEMKVKRVGEFV 155 (158)
Q Consensus 88 ~~~eli~~~~~~~~i~~~i~tdsi~~~sl~~l~~~~~~~~~~---~~~~cf~~~y-~~~~~~~~~~~~~~~~ 155 (158)
++.++|.+.+..+..++++ -+.+.++.++.++ .- .|-.-|-|+| |...+|.-.|-||+|-
T Consensus 19 ~W~eLIeQML~~en~~ei~-------kDr~~Fl~~~e~F-~FkCP~CgEEFyG~~Lp~~EaeKVFELLNdFk 82 (95)
T 2k5c_A 19 KWEELIEEMLIIENFEEIV-------KDRERFLAQVEEF-VFKCPVCGEEFYGKTLPRREAEKVFELLNDFK 82 (95)
T ss_dssp CHHHHHHHSTTCSTHHHHT-------TCHHHHHHHHHHS-EEECTTTCCEEETTSSCTTTHHHHHHHHHSCS
T ss_pred CHHHHHHHHHhhccHHHHH-------hhHHHHHHHHHHH-hhcCCCccHHHhcccCChHHHHHHHHHHHHcc
Confidence 6788888876666655543 2356666666553 12 3555589999 9999999999999984
No 59
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=65.12 E-value=8.5 Score=27.25 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=21.2
Q ss_pred CCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEE
Q 045545 36 GKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 36 gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
+-+|+||||--+.-..+ .+.|++.|...+..+
T Consensus 12 ~~rILiVDD~~~~r~~l---~~~L~~~G~~~v~~a 43 (134)
T 3to5_A 12 NMKILIVDDFSTMRRIV---KNLLRDLGFNNTQEA 43 (134)
T ss_dssp TCCEEEECSCHHHHHHH---HHHHHHTTCCCEEEE
T ss_pred CCEEEEEeCCHHHHHHH---HHHHHHcCCcEEEEE
Confidence 44799999976544433 355778887766543
No 60
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=55.49 E-value=25 Score=22.08 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=27.5
Q ss_pred CCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
-+++.++++.+ +|.....++..|++.|-..+++
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v~~ 71 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHVEN 71 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSEEE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCEEe
Confidence 36788999875 6888888999999999988875
No 61
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=52.07 E-value=17 Score=24.03 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=26.8
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.|+++++ +|.....++..|++.|-..|++
T Consensus 51 ~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~~ 82 (106)
T 3hix_A 51 KSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVSE 82 (106)
T ss_dssp TTSCEEEECS---SHHHHHHHHHHHHHTTCSCEEE
T ss_pred CCCeEEEEEC---CCChHHHHHHHHHHcCCcCEEE
Confidence 5678888875 6888888999999999988875
No 62
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=49.84 E-value=18 Score=25.54 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=27.1
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.++++++ +|.....++..|++.|-..|++
T Consensus 55 ~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v~~ 86 (141)
T 3ilm_A 55 KSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVSE 86 (141)
T ss_dssp TTSEEEEECS---SHHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCeEEEEEC---CChHHHHHHHHHHHcCCCCEEE
Confidence 5678888876 7888888999999999988874
No 63
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=49.11 E-value=32 Score=22.27 Aligned_cols=31 Identities=16% Similarity=0.333 Sum_probs=26.1
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.+++.. .+|.....++..|++.|- .|+.
T Consensus 55 ~~~~ivvyC---~~g~rs~~a~~~L~~~G~-~v~~ 85 (100)
T 3foj_A 55 DNETYYIIC---KAGGRSAQVVQYLEQNGV-NAVN 85 (100)
T ss_dssp TTSEEEEEC---SSSHHHHHHHHHHHTTTC-EEEE
T ss_pred CCCcEEEEc---CCCchHHHHHHHHHHCCC-CEEE
Confidence 568888886 678888899999999999 7764
No 64
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=48.28 E-value=32 Score=28.03 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=29.9
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEE
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
.+++||+++|+ -+|++-..++..|.+.|++.|.++
T Consensus 144 ~~l~gk~~lVl----GAGGaaraia~~L~~~G~~~v~v~ 178 (312)
T 3t4e_A 144 FDMRGKTMVLL----GAGGAATAIGAQAAIEGIKEIKLF 178 (312)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCcCCCEEEEE----CcCHHHHHHHHHHHHcCCCEEEEE
Confidence 35789999987 469999999999999999988864
No 65
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=47.90 E-value=20 Score=23.65 Aligned_cols=32 Identities=22% Similarity=0.177 Sum_probs=26.6
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.++++.+ +|.....++..|++.|-..|+.
T Consensus 57 ~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~~ 88 (108)
T 1gmx_A 57 FDTPVMVMCY---HGNSSKGAAQYLLQQGYDVVYS 88 (108)
T ss_dssp TTSCEEEECS---SSSHHHHHHHHHHHHTCSSEEE
T ss_pred CCCCEEEEcC---CCchHHHHHHHHHHcCCceEEE
Confidence 5788888875 6788888999999999987774
No 66
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=47.83 E-value=34 Score=27.21 Aligned_cols=35 Identities=31% Similarity=0.339 Sum_probs=30.4
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEE
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
.+++||+++|+ -.|++.+.++-.|.+.|+.+|.++
T Consensus 121 ~~~~~~~~lil----GaGGaarai~~aL~~~g~~~i~i~ 155 (269)
T 3tum_A 121 FEPAGKRALVI----GCGGVGSAIAYALAEAGIASITLC 155 (269)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCcccCeEEEE----ecHHHHHHHHHHHHHhCCCeEEEe
Confidence 45689999865 799999999999999999999873
No 67
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=45.06 E-value=27 Score=23.18 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=26.0
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.++++. .+|.....++..|++.|- .|+.
T Consensus 54 ~~~~ivvyC---~~G~rs~~aa~~L~~~G~-~v~~ 84 (108)
T 3gk5_A 54 RDKKYAVIC---AHGNRSAAAVEFLSQLGL-NIVD 84 (108)
T ss_dssp TTSCEEEEC---SSSHHHHHHHHHHHTTTC-CEEE
T ss_pred CCCeEEEEc---CCCcHHHHHHHHHHHcCC-CEEE
Confidence 567888887 678888899999999999 7774
No 68
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=43.50 E-value=28 Score=27.06 Aligned_cols=40 Identities=25% Similarity=0.295 Sum_probs=31.3
Q ss_pred eeeccccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEE
Q 045545 25 LKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVH 68 (158)
Q Consensus 25 ~~~~~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~ 68 (158)
+.++|+--+++||+|||| -.|......++.|.++||....
T Consensus 20 ~~~~Pifl~L~gk~VLVV----GgG~va~~ka~~Ll~~GA~VtV 59 (223)
T 3dfz_A 20 RHMYTVMLDLKGRSVLVV----GGGTIATRRIKGFLQEGAAITV 59 (223)
T ss_dssp --CCEEEECCTTCCEEEE----CCSHHHHHHHHHHGGGCCCEEE
T ss_pred cCccccEEEcCCCEEEEE----CCCHHHHHHHHHHHHCCCEEEE
Confidence 445688889999999987 4688888889999999996443
No 69
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=40.87 E-value=43 Score=21.69 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=25.5
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.++++. .+|.....++..|++.|. .|+.
T Consensus 55 ~~~~iv~yC---~~g~rs~~a~~~L~~~G~-~v~~ 85 (103)
T 3eme_A 55 KNEIYYIVC---AGGVRSAKVVEYLEANGI-DAVN 85 (103)
T ss_dssp TTSEEEEEC---SSSSHHHHHHHHHHTTTC-EEEE
T ss_pred CCCeEEEEC---CCChHHHHHHHHHHHCCC-CeEE
Confidence 678888887 578788889999999999 6664
No 70
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=40.23 E-value=46 Score=27.04 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=29.6
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEE
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
.+++||+++|+= +|+.-..++..|.+.|++.|.++
T Consensus 150 ~~l~gk~~lVlG----aGG~g~aia~~L~~~Ga~~V~i~ 184 (315)
T 3tnl_A 150 HDIIGKKMTICG----AGGAATAICIQAALDGVKEISIF 184 (315)
T ss_dssp CCCTTSEEEEEC----CSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCccCCEEEEEC----CChHHHHHHHHHHHCCCCEEEEE
Confidence 457899999874 58999999999999999988864
No 71
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=39.46 E-value=41 Score=22.99 Aligned_cols=32 Identities=25% Similarity=0.276 Sum_probs=26.6
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.|++.+. +|.....++..|++.|-..|++
T Consensus 85 ~~~~ivvyC~---~G~rs~~a~~~L~~~G~~~v~~ 116 (139)
T 2hhg_A 85 EDKKFVFYCA---GGLRSALAAKTAQDMGLKPVAH 116 (139)
T ss_dssp SSSEEEEECS---SSHHHHHHHHHHHHHTCCSEEE
T ss_pred CCCeEEEECC---CChHHHHHHHHHHHcCCCCeEE
Confidence 6788999875 5777778999999999988875
No 72
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=39.28 E-value=54 Score=25.91 Aligned_cols=35 Identities=20% Similarity=0.298 Sum_probs=29.2
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEE
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
.+++||+++|+ -+|+.-..++..|.+.|+..|.++
T Consensus 116 ~~l~~k~~lvl----GaGg~~~aia~~L~~~G~~~v~i~ 150 (272)
T 3pwz_A 116 EPLRNRRVLLL----GAGGAVRGALLPFLQAGPSELVIA 150 (272)
T ss_dssp CCCTTSEEEEE----CCSHHHHHHHHHHHHTCCSEEEEE
T ss_pred CCccCCEEEEE----CccHHHHHHHHHHHHcCCCEEEEE
Confidence 35789999987 468999999999999999888864
No 73
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=38.67 E-value=47 Score=26.58 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=29.6
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEE
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
.+++||+++|+ -+|++-..++..|.+.|++.|.++
T Consensus 118 ~~~~~k~vlvl----GaGGaaraia~~L~~~G~~~v~v~ 152 (282)
T 3fbt_A 118 VEIKNNICVVL----GSGGAARAVLQYLKDNFAKDIYVV 152 (282)
T ss_dssp CCCTTSEEEEE----CSSTTHHHHHHHHHHTTCSEEEEE
T ss_pred CCccCCEEEEE----CCcHHHHHHHHHHHHcCCCEEEEE
Confidence 35789999986 478999999999999999988864
No 74
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=37.61 E-value=46 Score=22.14 Aligned_cols=31 Identities=26% Similarity=0.390 Sum_probs=25.2
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVH 68 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~ 68 (158)
+++.++++- .+|.....+++.|++.|-..++
T Consensus 55 ~~~~ivv~C---~~G~rS~~aa~~L~~~G~~~~~ 85 (103)
T 3iwh_A 55 KNEIYYIVC---AGGVRSAKVVEYLEANGIDAVN 85 (103)
T ss_dssp TTSEEEEEC---SSSSHHHHHHHHHHTTTCEEEE
T ss_pred CCCeEEEEC---CCCHHHHHHHHHHHHcCCCEEE
Confidence 677888874 5788888999999999997655
No 75
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=37.40 E-value=45 Score=22.27 Aligned_cols=32 Identities=28% Similarity=0.330 Sum_probs=25.6
Q ss_pred CC-CEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EG-KRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~g-k~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
++ +.|++..+ .+|.....++..|++.|- .|++
T Consensus 87 ~~~~~ivvyC~--~~G~rs~~a~~~L~~~G~-~v~~ 119 (134)
T 3g5j_A 87 LNYDNIVIYCA--RGGMRSGSIVNLLSSLGV-NVYQ 119 (134)
T ss_dssp TTCSEEEEECS--SSSHHHHHHHHHHHHTTC-CCEE
T ss_pred cCCCeEEEEEC--CCChHHHHHHHHHHHcCC-ceEE
Confidence 45 88888865 577778889999999999 6764
No 76
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=36.80 E-value=62 Score=25.66 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=29.4
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEE
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
.+++||+++|+= +|+.-..++..|.+.|+..|.++
T Consensus 123 ~~l~~k~vlVlG----aGG~g~aia~~L~~~G~~~v~i~ 157 (283)
T 3jyo_A 123 PNAKLDSVVQVG----AGGVGNAVAYALVTHGVQKLQVA 157 (283)
T ss_dssp TTCCCSEEEEEC----CSHHHHHHHHHHHHTTCSEEEEE
T ss_pred cCcCCCEEEEEC----CcHHHHHHHHHHHHCCCCEEEEE
Confidence 367899999873 58999999999999999988863
No 77
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=34.24 E-value=72 Score=26.10 Aligned_cols=43 Identities=23% Similarity=0.293 Sum_probs=31.3
Q ss_pred ccccCCCCEEEEEecccccc-HH---HHHHHHHHHHcCCcEEEEEee
Q 045545 30 VTGVLEGKRVVVVDDSIVRG-TT---SSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 30 ~~~~v~gk~vliVDDvi~TG-~T---l~~~~~~L~~~Ga~~V~v~v~ 72 (158)
+...++|++|+||-.....- .. +.-++..|+.+||++|.+++.
T Consensus 48 i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA~rIt~ViP 94 (319)
T 3dah_A 48 IQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASAGRITAAIP 94 (319)
T ss_dssp ECSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTBSEEEEEES
T ss_pred ECCCcCCCeEEEEccCCCCCcHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 45789999999997654321 12 445778899999999987653
No 78
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=34.22 E-value=65 Score=25.55 Aligned_cols=35 Identities=11% Similarity=0.330 Sum_probs=29.1
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEE
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
.+++||+++|+ -+|+.-..++..|.+.|+..|.++
T Consensus 122 ~~l~~k~vlvl----GaGg~g~aia~~L~~~G~~~v~v~ 156 (281)
T 3o8q_A 122 VLLKGATILLI----GAGGAARGVLKPLLDQQPASITVT 156 (281)
T ss_dssp CCCTTCEEEEE----CCSHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCccCCEEEEE----CchHHHHHHHHHHHhcCCCeEEEE
Confidence 35789999987 368888889999999999888864
No 79
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=32.36 E-value=42 Score=23.45 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=24.7
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.|++... +|.....++..|++.|-..|+.
T Consensus 79 ~~~~ivvyC~---~G~rS~~aa~~L~~~G~~~v~~ 110 (148)
T 2fsx_A 79 HERPVIFLCR---SGNRSIGAAEVATEAGITPAYN 110 (148)
T ss_dssp --CCEEEECS---SSSTHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEcC---CChhHHHHHHHHHHcCCcceEE
Confidence 5678888874 6777778999999999987775
No 80
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=32.00 E-value=37 Score=23.19 Aligned_cols=32 Identities=25% Similarity=0.209 Sum_probs=26.1
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.++++.. +|.....++..|++.|-..|+.
T Consensus 81 ~~~~ivvyC~---~G~rs~~aa~~L~~~G~~~v~~ 112 (129)
T 1tq1_A 81 QSDNIIVGCQ---SGGRSIKATTDLLHAGFTGVKD 112 (129)
T ss_dssp TTSSEEEEES---SCSHHHHHHHHHHHHHCCSEEE
T ss_pred CCCeEEEECC---CCcHHHHHHHHHHHcCCCCeEE
Confidence 5677888865 6888888999999999887774
No 81
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=30.65 E-value=46 Score=23.06 Aligned_cols=32 Identities=25% Similarity=0.197 Sum_probs=26.2
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.|++.. .+|.....++..|++.|-..|+.
T Consensus 81 ~~~~ivvyC---~~G~rS~~aa~~L~~~G~~~v~~ 112 (137)
T 1qxn_A 81 PEKPVVVFC---KTAARAALAGKTLREYGFKTIYN 112 (137)
T ss_dssp TTSCEEEEC---CSSSCHHHHHHHHHHHTCSCEEE
T ss_pred CCCeEEEEc---CCCcHHHHHHHHHHHcCCcceEE
Confidence 677888887 46777788999999999988875
No 82
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=29.93 E-value=79 Score=25.12 Aligned_cols=43 Identities=9% Similarity=0.302 Sum_probs=31.1
Q ss_pred ccccCCCCEEEEEeccccccHH---HHHHHHHHHHcCCcEEEEEee
Q 045545 30 VTGVLEGKRVVVVDDSIVRGTT---SSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 30 ~~~~v~gk~vliVDDvi~TG~T---l~~~~~~L~~~Ga~~V~v~v~ 72 (158)
+...++|++|+|+-.....-.. +.-+++.|+.+||++|.+++.
T Consensus 41 i~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~~~~a~~i~~v~P 86 (284)
T 1u9y_A 41 IVDEINDDEAVIINTQKNQNDAIVETILLCDALRDEGVKKITLVAP 86 (284)
T ss_dssp ECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHTTTCCEEEEECS
T ss_pred eCCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCceEEEEec
Confidence 4567899999999876542122 334678899999999887543
No 83
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=29.27 E-value=99 Score=19.48 Aligned_cols=38 Identities=8% Similarity=0.333 Sum_probs=30.5
Q ss_pred CCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEee
Q 045545 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~ 72 (158)
-.|-.++=|++.-.+|.|..++.+.++..+. .+.+.+.
T Consensus 41 ~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~-~v~L~v~ 78 (88)
T 3e17_A 41 HEGDIILKINGTVTENMSLTDARKLIEKSRG-KLQLVVL 78 (88)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHTTT-EEEEEEC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEe
Confidence 3577888999999999999999999998765 5665554
No 84
>3exc_X Uncharacterized protein; ferredoxin fold, double split beta-alpha-beta fold, dimer, C aspartate, RNA'ASE, hydrolase; 2.25A {Sulfolobus solfataricus} SCOP: d.58.58.0
Probab=28.92 E-value=89 Score=20.72 Aligned_cols=67 Identities=16% Similarity=0.274 Sum_probs=42.6
Q ss_pred CCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecceeeecCCCHHHHHhcCccchhhheee--ccCcccc
Q 045545 36 GKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFI--GCDSLAF 113 (158)
Q Consensus 36 gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i--~tdsi~~ 113 (158)
+..++|+=|+-+. .....+++.|++.|-..|. ...+-|..++.....+. ..+.+++ ..|++-+
T Consensus 3 ~M~vlV~YDI~~~-krr~kv~k~l~~yGl~rvQ---------~SVFe~~lt~~~~~~L~-----~~L~~~id~~~Dsv~i 67 (91)
T 3exc_X 3 GMKLLVVYDVSDD-SKRNKLANNLKKLGLERIQ---------RSAFEGDMDSQRMKDLV-----RVVKLIVDTNTDIVHI 67 (91)
T ss_dssp -CEEEEEEECCSH-HHHHHHHHHHHHTTCEEEE---------TTEEEEECC--CHHHHH-----HHHHHHSCTTTCEEEE
T ss_pred ceEEEEEEeCCCc-hHHHHHHHHHHHhCCccce---------eeEEEEECCHHHHHHHH-----HHHHHhcCCCCCEEEE
Confidence 4568888898765 3568899999999976666 34555554444444443 3566666 3677776
Q ss_pred cChH
Q 045545 114 LLID 117 (158)
Q Consensus 114 ~sl~ 117 (158)
..+.
T Consensus 68 y~l~ 71 (91)
T 3exc_X 68 IPLG 71 (91)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 5543
No 85
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=27.77 E-value=79 Score=20.76 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=25.2
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.+++.. .+|.....++..|++.|-.. +.
T Consensus 55 ~~~~ivvyC---~~G~rs~~aa~~L~~~G~~~-~~ 85 (110)
T 2k0z_A 55 KDKKVLLHC---RAGRRALDAAKSMHELGYTP-YY 85 (110)
T ss_dssp SSSCEEEEC---SSSHHHHHHHHHHHHTTCCC-EE
T ss_pred CCCEEEEEe---CCCchHHHHHHHHHHCCCCE-EE
Confidence 677888887 57888888999999999876 54
No 86
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=27.71 E-value=56 Score=22.38 Aligned_cols=32 Identities=16% Similarity=0.121 Sum_probs=25.8
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.++++ +.+|.....+++.|+++|-..|+.
T Consensus 73 ~~~~ivv~---C~sG~RS~~aa~~L~~~G~~~v~~ 104 (134)
T 1vee_A 73 ENTTLYIL---DKFDGNSELVAELVALNGFKSAYA 104 (134)
T ss_dssp GGCEEEEE---CSSSTTHHHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEE---eCCCCcHHHHHHHHHHcCCcceEE
Confidence 56777775 568888888999999999988774
No 87
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=27.65 E-value=1.1e+02 Score=19.48 Aligned_cols=31 Identities=26% Similarity=0.349 Sum_probs=20.2
Q ss_pred cCCCCEEEEEeccccccHHHHHHHHHHHHcCCcE
Q 045545 33 VLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKE 66 (158)
Q Consensus 33 ~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~ 66 (158)
...+++|+||||--.....+ .+.|.+.|...
T Consensus 4 ~~~~~~ilivdd~~~~~~~l---~~~L~~~g~~v 34 (130)
T 3eod_A 4 PLVGKQILIVEDEQVFRSLL---DSWFSSLGATT 34 (130)
T ss_dssp TTTTCEEEEECSCHHHHHHH---HHHHHHTTCEE
T ss_pred CCCCCeEEEEeCCHHHHHHH---HHHHHhCCceE
Confidence 34678999999865544444 44566777653
No 88
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=27.45 E-value=94 Score=26.11 Aligned_cols=35 Identities=34% Similarity=0.360 Sum_probs=29.4
Q ss_pred CCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEee
Q 045545 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~ 72 (158)
..||+|++| -.|.|-.+++..+.+.|+++|.++.-
T Consensus 262 ~~gk~VvVI----GgG~~a~d~A~~~~r~Ga~~Vtiv~r 296 (456)
T 2vdc_G 262 AAGKHVVVL----GGGDTAMDCVRTAIRQGATSVKCLYR 296 (456)
T ss_dssp CCCSEEEEE----CSSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred cCCCEEEEE----CCChhHHHHHHHHHHcCCCEEEEEEe
Confidence 578999987 68889999999999999998887643
No 89
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=26.84 E-value=76 Score=21.61 Aligned_cols=32 Identities=9% Similarity=0.226 Sum_probs=26.1
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+++.+++... +|.....++..|++.|-..|++
T Consensus 90 ~~~~ivvyC~---~G~rs~~aa~~L~~~G~~~v~~ 121 (139)
T 3d1p_A 90 SAKELIFYCA---SGKRGGEAQKVASSHGYSNTSL 121 (139)
T ss_dssp TTSEEEEECS---SSHHHHHHHHHHHTTTCCSEEE
T ss_pred CCCeEEEECC---CCchHHHHHHHHHHcCCCCeEE
Confidence 5788888764 5888888999999999887774
No 90
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=26.46 E-value=1.2e+02 Score=21.82 Aligned_cols=34 Identities=41% Similarity=0.602 Sum_probs=22.2
Q ss_pred cCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 33 VLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 33 ~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
...+.+||||||--..... ..+.|++.|...|..
T Consensus 58 ~~~~~~ILiVdDd~~~~~~---l~~~L~~~g~~~v~~ 91 (206)
T 3mm4_A 58 FLRGKRVLVVDDNFISRKV---ATGKLKKMGVSEVEQ 91 (206)
T ss_dssp TTTTCEEEEECSCHHHHHH---HHHHHHHTTCSEEEE
T ss_pred ccCCCEEEEEeCCHHHHHH---HHHHHHHcCCCeeee
Confidence 4578899999996544433 345566777655554
No 91
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=26.38 E-value=80 Score=20.40 Aligned_cols=33 Identities=27% Similarity=0.287 Sum_probs=19.3
Q ss_pred CCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
..+.+|+||||--.....+ .+.|++.|...+..
T Consensus 3 ~~~~~iLivdd~~~~~~~l---~~~L~~~g~~~v~~ 35 (129)
T 3h1g_A 3 LGSMKLLVVDDSSTMRRII---KNTLSRLGYEDVLE 35 (129)
T ss_dssp ---CCEEEECSCHHHHHHH---HHHHHHTTCCCEEE
T ss_pred CCCcEEEEEeCCHHHHHHH---HHHHHHcCCcEEEE
Confidence 3456799999966544444 34566777764443
No 92
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=26.33 E-value=1.4e+02 Score=24.42 Aligned_cols=43 Identities=19% Similarity=0.197 Sum_probs=30.5
Q ss_pred ccccCCCCEEEEEeccccc-cHH---HHHHHHHHHHcCCcEEEEEee
Q 045545 30 VTGVLEGKRVVVVDDSIVR-GTT---SSKIVRLLKEAGAKEVHMRIA 72 (158)
Q Consensus 30 ~~~~v~gk~vliVDDvi~T-G~T---l~~~~~~L~~~Ga~~V~v~v~ 72 (158)
+...++|++|+||-..... -.. +.-++..||.++|++|.+++.
T Consensus 44 i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA~rIt~ViP 90 (326)
T 3s5j_B 44 IGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVIP 90 (326)
T ss_dssp ECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEES
T ss_pred ECCCcCCCcEEEEecCCCCccHHHHHHHHHHHHHHhcCCcEEEEecc
Confidence 4578999999999764322 122 334668889999999987643
No 93
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=25.37 E-value=1.1e+02 Score=25.63 Aligned_cols=42 Identities=24% Similarity=0.200 Sum_probs=30.7
Q ss_pred ccccCCCCEEEEEecccc-ccHH---HHHHHHHHHHcCCcEEEEEe
Q 045545 30 VTGVLEGKRVVVVDDSIV-RGTT---SSKIVRLLKEAGAKEVHMRI 71 (158)
Q Consensus 30 ~~~~v~gk~vliVDDvi~-TG~T---l~~~~~~L~~~Ga~~V~v~v 71 (158)
+...++|++|+||-.... .-.. +.-++..||.++|++|.+++
T Consensus 73 i~esvrg~dV~iiqs~~~~~nd~lmeLl~~idA~k~asA~rit~Vi 118 (379)
T 2ji4_A 73 IQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVI 118 (379)
T ss_dssp ECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred eCCCcCCCEEEEEeCCCCCccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 456799999999988653 1223 33466789999999998754
No 94
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=24.77 E-value=1.1e+02 Score=19.30 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=23.7
Q ss_pred CEEEEEeccccccHHHHHHHHHHHHcCCcEEEE
Q 045545 37 KRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 37 k~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v 69 (158)
+.+++... +|.....++..|++.|-. |+.
T Consensus 54 ~~ivvyC~---~g~rs~~a~~~L~~~G~~-v~~ 82 (94)
T 1wv9_A 54 RPLLLVCE---KGLLSQVAALYLEAEGYE-AMS 82 (94)
T ss_dssp SCEEEECS---SSHHHHHHHHHHHHHTCC-EEE
T ss_pred CCEEEEcC---CCChHHHHHHHHHHcCCc-EEE
Confidence 77888764 688888899999999988 764
No 95
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=24.65 E-value=79 Score=24.94 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=28.1
Q ss_pred CCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEE
Q 045545 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
+++.|++.|+.-..|.....++..|+..|-..|+++
T Consensus 106 ~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L 141 (302)
T 3olh_A 106 AATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLL 141 (302)
T ss_dssp SSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEE
T ss_pred CCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEEC
Confidence 678899998754445567788999999999888765
No 96
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=23.34 E-value=1.6e+02 Score=19.15 Aligned_cols=41 Identities=32% Similarity=0.477 Sum_probs=31.8
Q ss_pred cCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec
Q 045545 33 VLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS 73 (158)
Q Consensus 33 ~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~ 73 (158)
--.|-.++=|++.-.++.|..++.+.++..+...|.+.+..
T Consensus 63 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R 103 (108)
T 2d92_A 63 LLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICS 103 (108)
T ss_dssp CCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEc
Confidence 34567888899988888889999999998765567765543
No 97
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=22.50 E-value=1.4e+02 Score=18.92 Aligned_cols=27 Identities=26% Similarity=0.300 Sum_probs=16.5
Q ss_pred CCEEEEEeccccccHHHHHHHHHHHHcCCc
Q 045545 36 GKRVVVVDDSIVRGTTSSKIVRLLKEAGAK 65 (158)
Q Consensus 36 gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~ 65 (158)
+++|+||||--.....+ ...|.+.|..
T Consensus 2 ~~~ilivdd~~~~~~~l---~~~L~~~g~~ 28 (120)
T 3f6p_A 2 DKKILVVDDEKPIADIL---EFNLRKEGYE 28 (120)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred CCeEEEEECCHHHHHHH---HHHHHhCCEE
Confidence 35799999865443333 3456666654
No 98
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=22.21 E-value=98 Score=26.13 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=29.4
Q ss_pred eccccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcE
Q 045545 27 LSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKE 66 (158)
Q Consensus 27 ~~~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~ 66 (158)
.+|+.-+++||+|+|| -.|.+-...++.|.++|+..
T Consensus 3 ~~P~~~~l~~~~vlVv----GgG~va~~k~~~L~~~ga~V 38 (457)
T 1pjq_A 3 HLPIFCQLRDRDCLIV----GGGDVAERKARLLLEAGARL 38 (457)
T ss_dssp CEEEEECCBTCEEEEE----CCSHHHHHHHHHHHHTTBEE
T ss_pred ceeeEEECCCCEEEEE----CCCHHHHHHHHHHHhCcCEE
Confidence 3466678899999965 68888888999999999863
No 99
>2z0l_A EA-D, BMRF1, early antigen protein D; alpha/beta protein, activator, DNA-binding, early protein, nucleus, transcription; 2.90A {Human herpesvirus 4}
Probab=22.06 E-value=90 Score=25.81 Aligned_cols=88 Identities=13% Similarity=0.181 Sum_probs=53.6
Q ss_pred cccccHHHHHHHHHHHHcCCcEEEEEeecCC-----------ceecceeeecCCCHHHHHhcCccchhhheeeccCcccc
Q 045545 45 SIVRGTTSSKIVRLLKEAGAKEVHMRIASPP-----------IIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAF 113 (158)
Q Consensus 45 vi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~-----------~~~~~~~gi~~~~~~eli~~~~~~~~i~~~i~tdsi~~ 113 (158)
++=+..|.....+.||+++.+.|.+-+- +. ....++.....++...+....-...+. ..+..|...+
T Consensus 169 V~Ls~KT~~~LqKWLRq~kt~~Vrv~lN-etL~V~v~tvgd~skTvd~kp~~v~p~~~~~~~~~K~~D~-G~V~~D~~~~ 246 (318)
T 2z0l_A 169 VLLMPKTASSLQKWARQQGSGGVKVTLN-PDLYVTTYTSGEACLTLDYKPLSVGPYEAFTGPVAKAQDV-GAVEAHVVCS 246 (318)
T ss_dssp EECCHHHHHHHHHHHHHTTTSEEEEEEE-TTTTEEEEEETTEEEEEECEECSSCGGGSSCSCBSSCCCE-EEECSCEEEE
T ss_pred EEEcHHHHHHHHHHHHHcCCCceEEEec-CceEEEEEEeCCceeEEEeecccCCchhhcccccccccce-eEEecceEEE
Confidence 4457889999999999999988664322 21 123344444443332221100111122 2356788889
Q ss_pred cChHHHHHHhcC--CCCCcccccc
Q 045545 114 LLIDSLNKMLGD--DSQNFCYACF 135 (158)
Q Consensus 114 ~sl~~l~~~~~~--~~~~~~~~cf 135 (158)
.+++-|.++|+- | +..|..||
T Consensus 247 V~l~sL~aALglCKI-Pgv~vP~~ 269 (318)
T 2z0l_A 247 VAADSLAAALSLCRI-PAVSVPIL 269 (318)
T ss_dssp EEHHHHHHHHHHHCC-TTTEEEEE
T ss_pred EeHHHHHHHhcccCC-CceeeeeE
Confidence 999999999853 4 67888887
No 100
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=21.91 E-value=1.1e+02 Score=23.15 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=26.5
Q ss_pred CCCCEEEEEeccccccH-HHHHHHHHHHHcCCcEEEEE
Q 045545 34 LEGKRVVVVDDSIVRGT-TSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 34 v~gk~vliVDDvi~TG~-Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
-+++.|++.++ +|. ....++..|+..|-..|+++
T Consensus 79 ~~~~~vvvyc~---~g~~~s~~a~~~L~~~G~~~v~~L 113 (271)
T 1e0c_A 79 RPEAVYVVYDD---EGGGWAGRFIWLLDVIGQQRYHYL 113 (271)
T ss_dssp CTTCEEEEECS---SSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCeEEEEcC---CCCccHHHHHHHHHHcCCCCeEEe
Confidence 36788999885 455 66778899999999888754
No 101
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=21.78 E-value=1.6e+02 Score=24.21 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=26.6
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCc
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAK 65 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~ 65 (158)
|.++|.+|.+|=|. +.+....+..+...|++
T Consensus 153 g~l~glkva~vGD~---~rva~Sl~~~~~~~G~~ 183 (323)
T 3gd5_A 153 GRLAGLKLAYVGDG---NNVAHSLLLGCAKVGMS 183 (323)
T ss_dssp SCCTTCEEEEESCC---CHHHHHHHHHHHHHTCE
T ss_pred CCCCCCEEEEECCC---CcHHHHHHHHHHHcCCE
Confidence 67899999999998 78888888888888875
No 102
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=21.31 E-value=63 Score=25.65 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=29.1
Q ss_pred ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEE
Q 045545 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 32 ~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
.+++||+++|+ -+|+.-..++..|.+.|++.|.++
T Consensus 113 ~~l~~k~vlvl----GaGg~g~aia~~L~~~G~~~v~v~ 147 (277)
T 3don_A 113 EGIEDAYILIL----GAGGASKGIANELYKIVRPTLTVA 147 (277)
T ss_dssp TTGGGCCEEEE----CCSHHHHHHHHHHHTTCCSCCEEE
T ss_pred CCcCCCEEEEE----CCcHHHHHHHHHHHHCCCCEEEEE
Confidence 35789999976 469999999999999999888764
No 103
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=20.97 E-value=1.1e+02 Score=20.47 Aligned_cols=31 Identities=29% Similarity=0.238 Sum_probs=23.5
Q ss_pred CCCEEEEEeccccccHH--HHHHHHHHHHcCCcEEEE
Q 045545 35 EGKRVVVVDDSIVRGTT--SSKIVRLLKEAGAKEVHM 69 (158)
Q Consensus 35 ~gk~vliVDDvi~TG~T--l~~~~~~L~~~Ga~~V~v 69 (158)
+++.++++.. +|.. ...++..|++.|-. |+.
T Consensus 70 ~~~~ivvyC~---~g~r~~s~~a~~~L~~~G~~-v~~ 102 (124)
T 3flh_A 70 PAKTYVVYDW---TGGTTLGKTALLVLLSAGFE-AYE 102 (124)
T ss_dssp TTSEEEEECS---SSSCSHHHHHHHHHHHHTCE-EEE
T ss_pred CCCeEEEEeC---CCCchHHHHHHHHHHHcCCe-EEE
Confidence 5788888864 5655 56788999999986 664
No 104
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=20.96 E-value=1.6e+02 Score=18.80 Aligned_cols=26 Identities=38% Similarity=0.471 Sum_probs=16.1
Q ss_pred CEEEEEeccccccHHHHHHHHHHHHcCCc
Q 045545 37 KRVVVVDDSIVRGTTSSKIVRLLKEAGAK 65 (158)
Q Consensus 37 k~vliVDDvi~TG~Tl~~~~~~L~~~Ga~ 65 (158)
++|+||||--..... ....|++.|..
T Consensus 3 ~~ILivdd~~~~~~~---l~~~l~~~g~~ 28 (122)
T 3gl9_A 3 KKVLLVDDSAVLRKI---VSFNLKKEGYE 28 (122)
T ss_dssp CEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred ceEEEEeCCHHHHHH---HHHHHHHCCcE
Confidence 579999986543333 34456667754
No 105
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=20.96 E-value=1.5e+02 Score=23.27 Aligned_cols=34 Identities=29% Similarity=0.441 Sum_probs=28.3
Q ss_pred cCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEE
Q 045545 33 VLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70 (158)
Q Consensus 33 ~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~ 70 (158)
+++|++++|+ -+|+.-..++..|.+.|+..|.++
T Consensus 138 ~l~~~~vlVl----GaGg~g~aia~~L~~~G~~~V~v~ 171 (297)
T 2egg_A 138 TLDGKRILVI----GAGGGARGIYFSLLSTAAERIDMA 171 (297)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHTTTCSEEEEE
T ss_pred CCCCCEEEEE----CcHHHHHHHHHHHHHCCCCEEEEE
Confidence 5789999886 468888889999999999888864
No 106
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=20.32 E-value=1.7e+02 Score=21.99 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=20.8
Q ss_pred CEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeec
Q 045545 37 KRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIAS 73 (158)
Q Consensus 37 k~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~ 73 (158)
+.++|||=... +.....+.|++.|...-+++..|
T Consensus 28 ~~~ilID~g~~---~~~~~~~~l~~~g~~i~~Il~TH 61 (245)
T 2gcu_A 28 KPALLIDPVDK---TVDRDLKLIDELGLKLIYAMNTH 61 (245)
T ss_dssp CEEEEESCBGG---GHHHHHHHHHHHTCEEEEEECSS
T ss_pred CcEEEEeCCCc---hHHHHHHHHHHCCCeeeEEEeCC
Confidence 45666664432 24556677888887655565554
No 107
>3c19_A Uncharacterized protein MK0293; protein structure initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 2.50A {Methanopyrus kandleri AV19}
Probab=20.27 E-value=67 Score=24.58 Aligned_cols=29 Identities=21% Similarity=0.250 Sum_probs=24.7
Q ss_pred EeccccccHHHHHHHHHHHH-cCCcEEEEEee
Q 045545 42 VDDSIVRGTTSSKIVRLLKE-AGAKEVHMRIA 72 (158)
Q Consensus 42 VDDvi~TG~Tl~~~~~~L~~-~Ga~~V~v~v~ 72 (158)
|||+ ||.-+-.+.+.|.+ +||..|++.-.
T Consensus 19 IDD~--tpE~lg~~~e~L~~~aGAlDV~~tPi 48 (186)
T 3c19_A 19 LDDR--DGEVLGDAIQKLIEREEVLACHAVPC 48 (186)
T ss_dssp EETT--STTHHHHHHHHHTTSTTEEEEEEEEE
T ss_pred CCCC--CHHHHHHHHHHHHhhCCCeEEEeeec
Confidence 6776 79999999999999 99999987544
Done!