RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 045545
(158 letters)
>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase,
C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 123 bits (311), Expect = 1e-36
Identities = 83/158 (52%), Positives = 115/158 (72%), Gaps = 5/158 (3%)
Query: 1 MNTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLK 60
+ RY TFI+PSQ +R+ GV++KLS V GV+EGKRVV+VDDSIVRGTTS +IV +L+
Sbjct: 69 LIKNRYVGRTFIQPSQALREQGVRMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLR 128
Query: 61 EAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLN 120
EAGA EVH++I+SPPI C+YG+DT + EELI++ SV+EIR+ IG D+L+FL ++ L
Sbjct: 129 EAGATEVHVKISSPPIAHPCFYGIDTSTHEELIASSHSVDEIRQEIGADTLSFLSVEGLL 188
Query: 121 KMLG----DDSQNFCYACFSGKYPVK-PEEMKVKRVGE 153
K +G D + C ACF+GKYP + ++ + V E
Sbjct: 189 KGIGRKYDDSNCGQCLACFTGKYPTEIYQDTVLPHVKE 226
>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 243
Score = 123 bits (309), Expect = 3e-36
Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 3/144 (2%)
Query: 3 TTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEA 62
RY TFI P Q++R V+ KL+ K V++VDDSIVRGTTS +I+ + +EA
Sbjct: 77 KNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREA 136
Query: 63 GAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKM 122
GAK+V++ A+P I YG+D PS+ ELI++ V+EIR+ IG D L F ++ L
Sbjct: 137 GAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDA 196
Query: 123 LGD---DSQNFCYACFSGKYPVKP 143
+ D Q F + F+G Y K
Sbjct: 197 VRAENPDIQQFECSVFNGVYVTKD 220
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426
(TTHA1462) {Thermus thermophilus [TaxId: 274]}
Length = 208
Score = 59.4 bits (143), Expect = 4e-12
Identities = 18/121 (14%), Positives = 45/121 (37%), Gaps = 18/121 (14%)
Query: 5 RYEHETFIEPS-----QKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLL 59
RY ++++E +R + + +G+ VV+VDD + G + + ++
Sbjct: 84 RYADQSYLEREAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVV 143
Query: 60 KEAGAKEVHMR--IASPPIIASC-----YYGVDTPSSEELIS------NRMSVEEIREFI 106
+ G + V + +ASP + + P + ++ E++ +
Sbjct: 144 FQEGPRRVVVAVPVASPEAVERLKARAEVVALSVPQDFAAVGAYYLDFGEVTDEDVEAIL 203
Query: 107 G 107
Sbjct: 204 L 204
>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase
TTHA1613 {Thermus thermophilus [TaxId: 274]}
Length = 174
Score = 47.0 bits (111), Expect = 8e-08
Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 6 YEHETFIEPSQKIRDFGVKLKLSPVT--GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAG 63
Y + I+ Q + ++ L +RVV+V D + G T + +++ AG
Sbjct: 87 YMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAG 146
Query: 64 AKEVHM 69
V
Sbjct: 147 GHVVAR 152
>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 184
Score = 44.3 bits (104), Expect = 8e-07
Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 30 VTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSS 89
V G + G+ ++VDD I + +LKE GA ++++ + A ++ S
Sbjct: 77 VVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSV 136
Query: 90 EELISNRMSVEEIREFIGCDSLAFLLIDSL 119
+E++ +V + + C + + I +
Sbjct: 137 DEVVVTN-TVPHEVQKLQCPKIKTVDISLI 165
>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase
{Bacillus subtilis [TaxId: 1423]}
Length = 191
Score = 42.3 bits (99), Expect = 4e-06
Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 5 RYEHETFIEPSQKIRDF--GVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEA 62
+ + T + + V+++DD + G + +V ++K+A
Sbjct: 84 SLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQA 143
Query: 63 GAKEVHM 69
GA +
Sbjct: 144 GASIAGI 150
>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase
{Bacillus subtilis [TaxId: 1423]}
Length = 149
Score = 39.9 bits (93), Expect = 2e-05
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPS 88
+ G +EGK +++DD I T + L E GAKEV+ P + ++ +
Sbjct: 43 NIVGNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVERINNST 102
Query: 89 SEELI-SNRMSVEEIREF--IGCDSLAFLLIDSLNKMLGDDS 127
+EL+ +N + + E ++ S+ LL +++ ++ S
Sbjct: 103 IKELVVTNSIKLPEEKKIERFKQLSVGPLLAEAIIRVHEQQS 144
>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 178
Score = 33.5 bits (76), Expect = 0.005
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 36 GKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69
G V++VDD I G +++ L+++ A +
Sbjct: 122 GSNVIIVDDIIATGGSAAAAGELVEQLEANLLEY 155
>d1nula_ c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase)
{Escherichia coli [TaxId: 562]}
Length = 150
Score = 31.9 bits (72), Expect = 0.015
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSE 90
+G+ +V+DD + G T+ I + +A + + A P++ Y VD P
Sbjct: 77 GDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVD--DYVVDIPQDT 131
>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId:
5661]}
Length = 236
Score = 32.4 bits (73), Expect = 0.017
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 33 VLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69
+ +G RVV++DD + G T+ ++L++ + A V M
Sbjct: 135 IGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEM 171
>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine
phosphoribosyltransferase PH0095 {Pyrococcus horikoshii
[TaxId: 53953]}
Length = 153
Score = 31.3 bits (70), Expect = 0.026
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 29 PVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVH---MRIASPPIIASCYYGVD 85
P+ G L+ KRVV+VDD G T ++ +K+ GAKE+ + + + YY
Sbjct: 76 PIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWTSVVPDYYVFR 135
Query: 86 T 86
T
Sbjct: 136 T 136
>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium
tuberculosis, TB, gene InhA [TaxId: 1773]}
Length = 268
Score = 30.5 bits (67), Expect = 0.064
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Query: 31 TGVLEGKRVVVVDDSIVRGTTSSK-----IVRLLKEAGAK 65
TG+L+GKR++V G + I R+ +E GA+
Sbjct: 1 TGLLDGKRILVS------GIITDSSIAFHIARVAQEQGAQ 34
>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId:
5741]}
Length = 181
Score = 30.0 bits (67), Expect = 0.076
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 36 GKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIA 72
V++ DD + G T + L + AG K ++ I
Sbjct: 116 HDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYIN 152
>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 178
Score = 30.0 bits (67), Expect = 0.079
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 36 GKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69
G+RVVVVDD + G T + LL A+ +
Sbjct: 118 GQRVVVVDDLLATGGTMNAACELLGRLQAEVLEC 151
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 366
Score = 30.3 bits (67), Expect = 0.080
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Query: 11 FIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMR 70
FI P++ ++ V K++ + G + VV+ D IV IV LK+ +
Sbjct: 6 FISPAKYVQGKNVITKIANYLEGI-GNKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVV 64
Query: 71 IASPPIIASCYYGVD 85
+ +
Sbjct: 65 FSGEASRNEVERIAN 79
>d1o57a2 c.61.1.1 (A:75-276) Pur operon repressor (PurR), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 202
Score = 28.9 bits (64), Expect = 0.19
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 36 GKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69
G V+++DD + G T + ++ LL E A +
Sbjct: 122 GSNVLIIDDFMKAGGTINGMINLLDEFNANVAGI 155
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima
[TaxId: 2336]}
Length = 364
Score = 28.8 bits (63), Expect = 0.24
Identities = 11/70 (15%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Query: 10 TFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAK-EVH 68
T I P + ++ G L + VV+DD + + + ++
Sbjct: 5 TTIFPGRYVQGAGAINILEEELSRFGERAFVVIDDFVDKNVLGENFFSSFTKVRVNKQIF 64
Query: 69 MRIASPPIIA 78
S I
Sbjct: 65 GGECSDEEIE 74
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus
[TaxId: 1394]}
Length = 208
Score = 28.8 bits (64), Expect = 0.26
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM--RIASPP 75
+E + ++VD + G ++ + LK+ GAK + IA+P
Sbjct: 121 VEERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFMCLIAAPE 164
>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3,
RGS3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 26.7 bits (59), Expect = 0.43
Identities = 4/40 (10%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRI 71
G+ + V+ +++ V ++ ++ E+ + +
Sbjct: 35 GLQQLDTVLQLNERPVEHWKCVELAHEIRSCP-SEIILLV 73
>d1a3ca_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Bacillus
subtilis [TaxId: 1423]}
Length = 178
Score = 27.3 bits (60), Expect = 0.57
Identities = 9/46 (19%), Positives = 20/46 (43%)
Query: 22 GVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEV 67
+K + + + ++V++VDD + G T + L + G
Sbjct: 82 EPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSS 127
>d1yfza1 c.61.1.1 (A:3-180) Xanthine-guanine PRTase (XPRTase)
{Thermoanaerobacter tengcongensis [TaxId: 119072]}
Length = 178
Score = 27.2 bits (60), Expect = 0.60
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 22 GVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM------RIASPP 75
G+ + +EGK V++V+D I G T + + L + + +
Sbjct: 78 GIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERREA 137
Query: 76 IIASCYYGVDTP 87
+ Y G P
Sbjct: 138 DVKVDYCGFKIP 149
>d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1,
GRIP1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 95
Score = 26.7 bits (59), Expect = 0.62
Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPP 75
G R++ ++ S ++G S+ + LL+ AG + V ++I
Sbjct: 49 IGDRILAINSSSLKGKPLSEAIHLLQMAG-ETVTLKIKKQT 88
>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter
pylori [TaxId: 210]}
Length = 274
Score = 27.7 bits (60), Expect = 0.64
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 11/39 (28%)
Query: 32 GVLEGKRVVVVDDSIVRGTTSSK-----IVRLLKEAGAK 65
G L+GK+ ++V G ++K I + GA
Sbjct: 1 GFLKGKKGLIV------GVANNKSIAYGIAQSCFNQGAT 33
>d2bgca1 a.4.5.4 (A:138-237) Listeriolysin regulatory protein PrfA,
C-terminal domain {Bacteria (Listeria monocytogenes)
[TaxId: 1639]}
Length = 100
Score = 25.9 bits (57), Expect = 1.1
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 70 RIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCD 109
I S +I + YG +TP ++ + ++++E+ G
Sbjct: 5 SICSQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIA 44
>d1lh0a_ c.61.1.1 (A:) Orotate PRTase {Salmonella typhimurium
[TaxId: 90371]}
Length = 213
Score = 26.6 bits (58), Expect = 1.3
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHM 69
G RV++VDD I GT + + +++ GA +
Sbjct: 113 GSALQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGV 150
>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli
[TaxId: 562]}
Length = 258
Score = 26.4 bits (57), Expect = 1.4
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 32 GVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAK 65
G L GKR++V + I + + GA+
Sbjct: 1 GFLSGKRILVTGVASKLSIAYG-IAQAMHREGAE 33
>d2fvga1 b.49.3.1 (A:65-148) Endoglucanase TM1049 {Thermotoga
maritima [TaxId: 2336]}
Length = 84
Score = 25.1 bits (55), Expect = 1.7
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 16 QKIRDFGVKLKLSPVTGV----LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRI 71
KI G K+ PV GV L GK V V + V G + R + + ++RI
Sbjct: 5 SKIEKDG-KVSFLPVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRI 63
>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate
dehydrogenase/cyclohydrolase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 171
Score = 25.8 bits (56), Expect = 1.8
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 18 IRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGA 64
+ + L P L GK+ +V++ S + G + LL GA
Sbjct: 11 LEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRP---LAALLANDGA 54
>d1ufxa_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 25.3 bits (55), Expect = 2.2
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAG 63
G ++ V+ +RG + R++ EA
Sbjct: 53 VGHVILEVNGLTLRGKEHREAARIIAEAF 81
>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 118
Score = 25.0 bits (54), Expect = 3.4
Identities = 9/46 (19%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 33 VLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAK---EVHMRIASPP 75
V++G ++ ++ IV T ++ L++A + + + +A P
Sbjct: 62 VVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCP 107
>d1yifa1 b.29.1.23 (A:325-533) Beta-D-xylosidase C-terminal domain
{Bacillus subtilis [TaxId: 1423]}
Length = 209
Score = 25.1 bits (54), Expect = 3.7
Identities = 8/56 (14%), Positives = 20/56 (35%)
Query: 30 VTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVD 85
VT E R++ + + +++ K V++R+ +Y +
Sbjct: 98 VTHDEELGRILELTICDNFSFSQPLNNKIVIPREVKYVYLRVNIEKDKYYYFYSFN 153
>d1w30a_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 182
Score = 25.0 bits (54), Expect = 3.9
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 35 EGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEV 67
+ V++VDD + G + + L++ G
Sbjct: 100 DDALVILVDDVLYSGRSVRSALDALRDVGRPRA 132
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 248
Score = 25.3 bits (53), Expect = 4.1
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 34 LEGKRVVVVDDSIVRGTTSS 53
+GK+V + DSI
Sbjct: 6 WQGKKVGYIGDSITDPNCYG 25
>d1mc0a2 d.110.2.1 (A:402-555) 3',5'-cyclic nucleotide
phosphodiesterase 2A, GAF A and GAF B domains {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 24.6 bits (52), Expect = 4.6
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 99 VEEIREFIGCDSLAFLLID 117
+ E R + + L+D
Sbjct: 10 ITEARNLSNAEICSVFLLD 28
>d1wyha1 g.39.1.3 (A:35-66) Four and a half LIM domains 3, FHL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 32
Score = 22.8 bits (49), Expect = 5.0
Identities = 4/15 (26%), Positives = 8/15 (53%)
Query: 125 DDSQNFCYACFSGKY 139
D ++C C+ K+
Sbjct: 17 DKGAHYCVPCYENKF 31
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId:
2336]}
Length = 118
Score = 24.5 bits (53), Expect = 5.0
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Query: 36 GKRVVVVDDS-IVRGTTSSKIVRLLKEAGAKEVH 68
GKRV++VDD+ +R + ++ +AG +
Sbjct: 1 GKRVLIVDDAAFMRMM----LKDIITKAGYEVAG 30
>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon
AmiR {Pseudomonas aeruginosa [TaxId: 287]}
Length = 189
Score = 24.6 bits (52), Expect = 5.0
Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 7/58 (12%)
Query: 28 SPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVD 85
+ + G L +V+V++ +V L G P + VD
Sbjct: 3 NSLLGSLRELQVLVLNPPGEVSDA---LVLQLIRIG----CSVRQCWPPPEAFDVPVD 53
>d2fpna1 d.129.10.1 (A:1-214) Hypothetical protein YwmB {Bacillus
subtilis [TaxId: 1423]}
Length = 214
Score = 24.9 bits (54), Expect = 5.4
Identities = 8/38 (21%), Positives = 13/38 (34%), Gaps = 9/38 (23%)
Query: 30 VTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEV 67
+ G L+ + K +LL E A+ V
Sbjct: 131 LNGHLDDN---------MNIVLQKKANQLLNEFQARSV 159
>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 118
Score = 24.2 bits (52), Expect = 5.4
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 25 LKLSPVTGVLEGKRVVVVDDSIV---RGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCY 81
L+L V G EG + S + R ++I +K+AG H+RI + +
Sbjct: 13 LRLVFVKGPREGDALDYKPGSTIRVGRIVRGNEIA--IKDAGISTKHLRIE---SDSGNW 67
Query: 82 YGVDTPSSEELISNRMSVEE 101
D SS + N +++
Sbjct: 68 VIQDLGSSNGTLLNSNALDP 87
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR,
naphtol reductase) {Rice blast fungus (Magnaporthe
grisea) [TaxId: 148305]}
Length = 272
Score = 24.7 bits (53), Expect = 5.7
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 13/44 (29%)
Query: 27 LSPVTGVLEGKRVVVVDDSIVRGTTSSK-----IVRLLKEAGAK 65
L P + LEGK +V T + + + L G K
Sbjct: 9 LGPQSASLEGKVALV--------TGAGRGIGREMAMELGRRGCK 44
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional
dehydrogenase/ferrochelatase Met8p, N-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 150
Score = 24.3 bits (52), Expect = 6.8
Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 4/32 (12%)
Query: 34 LEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAK 65
L+ KR++++ G + L G K
Sbjct: 11 LKDKRILLIGG----GEVGLTRLYKLMPTGCK 38
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.136 0.389
Gapped
Lambda K H
0.267 0.0349 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 599,047
Number of extensions: 27540
Number of successful extensions: 151
Number of sequences better than 10.0: 1
Number of HSP's gapped: 149
Number of HSP's successfully gapped: 50
Length of query: 158
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 80
Effective length of database: 1,336,656
Effective search space: 106932480
Effective search space used: 106932480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.7 bits)