BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045548
(221 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3JWE|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
pdb|3JWE|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
Length = 320
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 116/220 (52%), Gaps = 10/220 (4%)
Query: 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI-VLKAVLDPKFE 59
HG S+G V V+D+ V+ + D PGLP F GHS G AI +L A P
Sbjct: 97 HGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERP--- 153
Query: 60 ANVAGVVLTSPAVGVEP-SHPIFVVLAP-IVSFLLPRYQISAANKNGMPVSRDPEALVAK 117
+ AG+VL SP V P S F VLA +++ +LP + + + + SR+ +
Sbjct: 154 GHFAGMVLISPLVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVL--SRNKTEVDIY 211
Query: 118 YTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYA 177
+DPL+ ++V G ++L + ++R L +L VPFLLL G+AD + D + + L + A
Sbjct: 212 NSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELA 271
Query: 178 SSADKTMKLYQGFLHDLLFE-PE-RDDIVKDIIDWLCCRV 215
S DKT+K+Y+G H L E PE + + +I W+ R
Sbjct: 272 KSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 311
>pdb|3HJU|A Chain A, Crystal Structure Of Human Monoglyceride Lipase
pdb|3HJU|B Chain B, Crystal Structure Of Human Monoglyceride Lipase
Length = 342
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 116/220 (52%), Gaps = 10/220 (4%)
Query: 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI-VLKAVLDPKFE 59
HG S+G V V+D+ V+ + D PGLP F GHS G AI +L A P
Sbjct: 98 HGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERP--- 154
Query: 60 ANVAGVVLTSPAVGVEP-SHPIFVVLAP-IVSFLLPRYQISAANKNGMPVSRDPEALVAK 117
+ AG+VL SP V P S F VLA +++ +LP + + + + SR+ +
Sbjct: 155 GHFAGMVLISPLVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVL--SRNKTEVDIY 212
Query: 118 YTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYA 177
+DPL+ ++V G ++L + ++R L +L VPFLLL G+AD + D + + L + A
Sbjct: 213 NSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELA 272
Query: 178 SSADKTMKLYQGFLHDLLFE-PE-RDDIVKDIIDWLCCRV 215
S DKT+K+Y+G H L E PE + + +I W+ R
Sbjct: 273 KSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 312
>pdb|3PE6|A Chain A, Crystal Structure Of A Soluble Form Of Human Mgll In
Complex With An Inhibitor
Length = 303
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Query: 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI-VLKAVLDPKFE 59
HG S+G V V+D+ V+ + D PGLP F GHS G AI +L A P
Sbjct: 80 HGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERP--- 136
Query: 60 ANVAGVVLTSPAVGVEP-SHPIFVVLAP-IVSFLLPRYQISAANKNGMPVSRDPEALVAK 117
+ AG+VL SP V P S F VLA +++ +LP +S+ + +SR+ +
Sbjct: 137 GHFAGMVLISPLVLANPESATTFKVLAAKVLNSVLP--NLSSGPIDSSVLSRNKTEVDIY 194
Query: 118 YTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYA 177
+DPL+ ++V G ++L + ++R L +L VPFLLL G+AD + D + + L + A
Sbjct: 195 NSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELA 254
Query: 178 SSADKTMKLYQGFLHDLLFE-PE-RDDIVKDIIDWLCCRV 215
S DKT+K+Y+G H L E PE + + +I W+ R
Sbjct: 255 KSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 294
>pdb|3JW8|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase
pdb|3JW8|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase
Length = 320
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 10/220 (4%)
Query: 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI-VLKAVLDPKFE 59
HG S+G V V+D+ V+ D PGLP F GHS G AI +L A P
Sbjct: 97 HGQSEGERXVVSDFHVFVRDVLQHVDSXQKDYPGLPVFLLGHSXGGAIAILTAAERP--- 153
Query: 60 ANVAGVVLTSPAVGVEP-SHPIFVVLAP-IVSFLLPRYQISAANKNGMPVSRDPEALVAK 117
+ AG VL SP V P S F VLA +++ +LP + + + + SR+ +
Sbjct: 154 GHFAGXVLISPLVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVL--SRNKTEVDIY 211
Query: 118 YTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYA 177
+DPL+ ++V G ++L + ++R L +L VPFLLL G+AD + D + + L + A
Sbjct: 212 NSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLXELA 271
Query: 178 SSADKTMKLYQGFLHDLLFE-PE-RDDIVKDIIDWLCCRV 215
S DKT+K+Y+G H L E PE + + +I W+ R
Sbjct: 272 KSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINXWVSQRT 311
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 141 TYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPER 200
T +L ++ VP L++HG AD V EAS + A T+K+Y G H L + +
Sbjct: 203 TDFTEDLKKIDVPTLVVHGDADQVVPIEAS-GIASAALVKGSTLKIYSGAPHGLT-DTHK 260
Query: 201 DDIVKDII 208
D + D++
Sbjct: 261 DQLNADLL 268
>pdb|3PF8|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
pdb|3PF8|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
Length = 270
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 76/194 (39%), Gaps = 35/194 (18%)
Query: 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEA 60
HG SDG + L+ ++D + V D + GHS G V+ ++L +
Sbjct: 86 HGDSDGKFENMTVLNE-IEDANAILNYVKTDPHVRNIYLVGHSQGG--VVASMLAGLYPD 142
Query: 61 NVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAK--Y 118
+ VVL +PA ++ A N V+ +P+ + + +
Sbjct: 143 LIKKVVLLAPAATLKGD---------------------ALEGNTQGVTYNPDHIPDRLPF 181
Query: 119 TDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYAS 178
D + +R+ I ++ + P L+HGT DTV P ASKK +
Sbjct: 182 KDLTLGGFYLRIAQQLPIYEVSAQFTK-------PVCLIHGTDDTVVSPNASKKYDQIYQ 234
Query: 179 SADKTMKLYQGFLH 192
++ T+ L +G H
Sbjct: 235 NS--TLHLIEGADH 246
>pdb|3PF9|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant
pdb|3PFB|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFB|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFC|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Ferulic
Acid
pdb|3S2Z|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
pdb|3S2Z|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
Length = 270
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 153 PFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLH 192
P L+HGT DTV P ASKK + ++ T+ L +G H
Sbjct: 209 PVCLIHGTDDTVVSPNASKKYDQIYQNS--TLHLIEGADH 246
>pdb|3QM1|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate, Form Ii
Length = 265
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 153 PFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLH 192
P L+HGT DTV P ASKK + ++ T+ L +G H
Sbjct: 209 PVCLIHGTDDTVVSPNASKKYDQIYQNS--TLHLIEGADH 246
>pdb|2CXH|A Chain A, Crystal Structure Of Probable Ribosomal Biogenesis Protein
From Aeropyrum Pernix K1
Length = 217
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 21 MKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPI 80
++ FV+ + A PG F GH + + +A++ V G +P + +
Sbjct: 48 IRSFVKDLSATIPGAFRFTRGHYSXEELAREAIIRGADRIVVVGERRGNPGI-----IRV 102
Query: 81 FVVLAP-----IVSFLLPRYQISAANKNGMPVSRDPEALVAKYTD 120
+ V P IVSF++ +S + G+P R E LVA+ D
Sbjct: 103 YAVEGPERPDNIVSFIVKGVSLSRERRWGLPSLRGGEVLVARPLD 147
>pdb|3C5V|A Chain A, Pp2a-Specific Methylesterase Apo Form (Pme)
Length = 316
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 145 RNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSAD--KTMKLYQGFLHDL 194
RNL +V + + +T PE SKK H Y + KT K + G+ L
Sbjct: 184 RNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGL 235
>pdb|4DIU|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or94
Length = 248
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 146 NLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVK 205
+L+ + P ++ D + +P+++ ++ S K +K Y+ H + + E+D + +
Sbjct: 176 HLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHE 235
Query: 206 DI------IDWL 211
DI +DWL
Sbjct: 236 DIYAFLESLDWL 247
>pdb|3AKC|A Chain A, Crystal Structure Of Cmp Kinase In Complex With Cdp And
Adp From Thermus Thermophilus Hb8
pdb|3AKD|A Chain A, Crystal Structure Of Cmp Kinase In Complex With Cdp From
Thermus Thermophilus Hb8
pdb|3AKE|A Chain A, Crystal Structure Of Cmp Kinase In Complex With Cmp From
Thermus Thermophilus Hb8
Length = 208
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 139 ITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYAS-------SADKTMKLYQGFL 191
+ ++ R L + PF+ T PEA+ K + AS A + + Y+ L
Sbjct: 106 VRAWVNRRLKEVPPPFVAEGRDMGTAVFPEAAHKFYLTASPEVRAWRRARERPQAYEEVL 165
Query: 192 HDLLFEPERD 201
DLL ERD
Sbjct: 166 RDLLRRDERD 175
>pdb|1L7A|A Chain A, Structural Genomics, Crystal Structure Of Cephalosporin C
Deacetylase
pdb|1L7A|B Chain B, Structural Genomics, Crystal Structure Of Cephalosporin C
Deacetylase
Length = 318
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 24/121 (19%)
Query: 111 PEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRN---------------------LNR 149
P+A VA Y + +I V L I ++ +RN +R
Sbjct: 197 PKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADR 256
Query: 150 LKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLL--FEPERDDIVKDI 207
+KVP L+ G D VT P + + + K +K+Y+ F H+ + F+ E+ K I
Sbjct: 257 VKVPVLMSIGLIDKVTPPSTVFAAYNHLETK-KELKVYRYFGHEYIPAFQTEKLAFFKQI 315
Query: 208 I 208
+
Sbjct: 316 L 316
>pdb|3AZP|A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant
pdb|3AZP|B Chain B, Crystal Structure Of Puromycin Hydrolase S511a Mutant
pdb|3AZQ|A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant
Complexed With Pgg
pdb|3AZQ|B Chain B, Crystal Structure Of Puromycin Hydrolase S511a Mutant
Complexed With Pgg
Length = 662
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 148 NRLKVPFLLLHGTADTVTDPEASKKL 173
+R++VPFLLL G D V PE +
Sbjct: 579 DRVRVPFLLLQGLEDPVCPPEQCDRF 604
>pdb|3AZO|A Chain A, Crystal Structure Of Puromycin Hydrolase
pdb|3AZO|B Chain B, Crystal Structure Of Puromycin Hydrolase
Length = 662
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 148 NRLKVPFLLLHGTADTVTDPEASKKL 173
+R++VPFLLL G D V PE +
Sbjct: 579 DRVRVPFLLLQGLEDPVCPPEQCDRF 604
>pdb|1ORV|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26)
pdb|1ORV|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26)
pdb|1ORV|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26)
pdb|1ORV|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26)
pdb|1ORW|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Peptidomimetic Inhibitor
pdb|1ORW|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Peptidomimetic Inhibitor
pdb|1ORW|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Peptidomimetic Inhibitor
pdb|1ORW|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Peptidomimetic Inhibitor
pdb|2BUA|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Low Molecular Weight Inhibitor.
pdb|2BUA|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Low Molecular Weight Inhibitor.
pdb|2BUA|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Low Molecular Weight Inhibitor.
pdb|2BUA|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Low Molecular Weight Inhibitor.
pdb|2BUC|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Tetrahydroisoquinoline
Inhibitor
pdb|2BUC|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Tetrahydroisoquinoline
Inhibitor
pdb|2BUC|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Tetrahydroisoquinoline
Inhibitor
pdb|2BUC|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
(Cd26) In Complex With A Tetrahydroisoquinoline
Inhibitor
pdb|2AJ8|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
7-Benzyl-1,3-
Dimethyl-8-Piperazin-1-Yl-3,7-Dihydro-Purine-2,6-Dione
(Bdpx)
pdb|2AJ8|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
7-Benzyl-1,3-
Dimethyl-8-Piperazin-1-Yl-3,7-Dihydro-Purine-2,6-Dione
(Bdpx)
pdb|2AJ8|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
7-Benzyl-1,3-
Dimethyl-8-Piperazin-1-Yl-3,7-Dihydro-Purine-2,6-Dione
(Bdpx)
pdb|2AJ8|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
7-Benzyl-1,3-
Dimethyl-8-Piperazin-1-Yl-3,7-Dihydro-Purine-2,6-Dione
(Bdpx)
pdb|2AJB|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
pdb|2AJB|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
pdb|2AJB|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
pdb|2AJB|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
pdb|2AJC|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
pdb|2AJC|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
pdb|2AJC|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
pdb|2AJC|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
pdb|2AJD|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
L-Pro-Boro-L- Pro (Boropro)
pdb|2AJD|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
L-Pro-Boro-L- Pro (Boropro)
pdb|2AJD|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
L-Pro-Boro-L- Pro (Boropro)
pdb|2AJD|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
L-Pro-Boro-L- Pro (Boropro)
Length = 728
Score = 28.9 bits (63), Expect = 2.1, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S +L K
Sbjct: 646 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQLSK 683
>pdb|1TQH|A Chain A, Covalent Reaction Intermediate Revealed In Crystal
Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est30
Length = 247
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/71 (21%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 146 NLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVK 205
+L+ + P ++ D + +P+++ ++ S K +K Y+ H + + E+D + +
Sbjct: 177 HLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHE 236
Query: 206 DI------IDW 210
DI +DW
Sbjct: 237 DIYAFLESLDW 247
>pdb|2GBC|A Chain A, Native Dpp-Iv (Cd26) From Rat
pdb|2GBC|B Chain B, Native Dpp-Iv (Cd26) From Rat
pdb|2GBF|A Chain A, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #1
pdb|2GBF|B Chain B, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #1
pdb|2GBG|A Chain A, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #2
pdb|2GBG|B Chain B, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #2
pdb|2GBI|A Chain A, Rat Dpp-Iv With Xanthine Inhibitor 4
pdb|2GBI|B Chain B, Rat Dpp-Iv With Xanthine Inhibitor 4
pdb|2I3Z|A Chain A, Rat Dpp-iv With Xanthine Mimetic Inhibitor #7
pdb|2I3Z|B Chain B, Rat Dpp-iv With Xanthine Mimetic Inhibitor #7
pdb|2OAE|A Chain A, Crystal Structure Of Rat Dipeptidyl Peptidase (Dppiv) With
Thiazole-Based Peptide Mimetic #31
pdb|2OAE|B Chain B, Crystal Structure Of Rat Dipeptidyl Peptidase (Dppiv) With
Thiazole-Based Peptide Mimetic #31
pdb|4FFV|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With 11a19 Fab
pdb|4FFV|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With 11a19 Fab
pdb|4FFW|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With Fab + Sitagliptin
pdb|4FFW|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With Fab + Sitagliptin
Length = 730
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 648 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 685
>pdb|1R9N|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
Length = 739
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 657 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 694
>pdb|2BGR|A Chain A, Crystal Structure Of Hiv-1 Tat Derived Nonapeptides
Tat(1-9) Bound To The Active Site Of Dipeptidyl
Peptidase Iv (Cd26)
pdb|2BGR|B Chain B, Crystal Structure Of Hiv-1 Tat Derived Nonapeptides
Tat(1-9) Bound To The Active Site Of Dipeptidyl
Peptidase Iv (Cd26)
Length = 738
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 656 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 693
>pdb|1X70|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With A Beta Amino
Acid Inhibitor
pdb|1X70|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With A Beta Amino
Acid Inhibitor
pdb|2FJP|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|2FJP|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|2HHA|A Chain A, The Structure Of Dpp4 In Complex With An Oxadiazole
Inhibitor
pdb|2HHA|B Chain B, The Structure Of Dpp4 In Complex With An Oxadiazole
Inhibitor
pdb|2IIT|A Chain A, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-one Inhibitor
pdb|2IIT|B Chain B, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-one Inhibitor
pdb|2IIV|A Chain A, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-One Inhibitor
pdb|2IIV|B Chain B, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-One Inhibitor
pdb|2OPH|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With An Alpha
Amino Acid Inhibitor
pdb|2OPH|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With An Alpha
Amino Acid Inhibitor
pdb|2P8S|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
CYCLOHEXALAMINE Inhibitor
pdb|2P8S|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
CYCLOHEXALAMINE Inhibitor
pdb|2QOE|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With A
Triazolopiperazine- Based Beta Amino Acid Inhibitor
pdb|2QOE|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With A
Triazolopiperazine- Based Beta Amino Acid Inhibitor
pdb|3C43|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLOUROOLEFIN Inhibitor
pdb|3C43|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLOUROOLEFIN Inhibitor
pdb|3C45|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLUOROOLEFIN Inhibitor
pdb|3C45|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLUOROOLEFIN Inhibitor
pdb|3D4L|A Chain A, Human Dipeptidyl Peptidase Iv/cd26 In Complex With A Novel
Inhibitor
pdb|3D4L|B Chain B, Human Dipeptidyl Peptidase Iv/cd26 In Complex With A Novel
Inhibitor
pdb|2QKY|A Chain A, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|2QKY|B Chain B, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|2QKY|C Chain C, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|2QKY|D Chain D, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|3HAB|A Chain A, The Structure Of Dpp4 In Complex With Piperidine Fused
Benzimidazole 25
pdb|3HAB|B Chain B, The Structure Of Dpp4 In Complex With Piperidine Fused
Benzimidazole 25
pdb|3HAC|A Chain A, The Structure Of Dpp-4 In Complex With Piperidine Fused
Imidazopyridine 34
pdb|3HAC|B Chain B, The Structure Of Dpp-4 In Complex With Piperidine Fused
Imidazopyridine 34
Length = 728
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 646 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 683
>pdb|1U8E|A Chain A, Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F
pdb|1U8E|B Chain B, Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F
Length = 728
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 646 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 683
>pdb|1R9M|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution.
pdb|1R9M|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution.
pdb|1R9M|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution.
pdb|1R9M|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution
Length = 733
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 651 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 688
>pdb|1J2E|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv
pdb|1J2E|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv
pdb|1WCY|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (dppiv)
Complex With Diprotin A
pdb|1WCY|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (dppiv)
Complex With Diprotin A
pdb|3VJM|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #1
pdb|3VJM|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #1
pdb|3VJK|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With Mp-513
pdb|3VJK|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With Mp-513
pdb|3VJL|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #2
pdb|3VJL|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #2
Length = 740
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 652 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 689
>pdb|1PFQ|A Chain A, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv /
Cd26
pdb|1PFQ|B Chain B, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv /
Cd26
Length = 731
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 649 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 686
>pdb|1N1M|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|1N1M|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|1NU6|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv)
pdb|1NU6|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv)
pdb|1NU8|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv) In Complex With Diprotin A (Ili)
pdb|1NU8|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv) In Complex With Diprotin A (Ili)
pdb|1TK3|A Chain A, Crystal Structure Of Human Apo Dipeptidyl Peptidase IvCD26
pdb|1TK3|B Chain B, Crystal Structure Of Human Apo Dipeptidyl Peptidase IvCD26
pdb|1TKR|A Chain A, Human Dipeptidyl Peptidase IvCD26 INHIBITED WITH
DIISOPROPYL Fluorophosphate
pdb|1TKR|B Chain B, Human Dipeptidyl Peptidase IvCD26 INHIBITED WITH
DIISOPROPYL Fluorophosphate
pdb|1W1I|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1RWQ|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With
5-Aminomethyl-6-(2,4-
Dichloro-Phenyl)-2-(3,
5-Dimethoxy-Phenyl)-Pyrimidin-4-Ylamine
pdb|1RWQ|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With
5-Aminomethyl-6-(2,4-
Dichloro-Phenyl)-2-(3,
5-Dimethoxy-Phenyl)-Pyrimidin-4-Ylamine
pdb|2BGN|A Chain A, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|B Chain B, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|C Chain C, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|D Chain D, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2AJL|I Chain I, X-Ray Structure Of Novel Biaryl-Based Dipeptidyl Peptidase
Iv Inhibitor
pdb|2AJL|J Chain J, X-Ray Structure Of Novel Biaryl-Based Dipeptidyl Peptidase
Iv Inhibitor
pdb|2BUB|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|2BUB|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|2OGZ|A Chain A, Crystal Structure Of Dpp-Iv Complexed With Lilly Aryl
Ketone Inhibitor
pdb|2OGZ|B Chain B, Crystal Structure Of Dpp-Iv Complexed With Lilly Aryl
Ketone Inhibitor
pdb|2OQI|A Chain A, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OQI|B Chain B, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OQI|C Chain C, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OQI|D Chain D, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OLE|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complex With Cyclic Hydrazine Derivatives
pdb|2OLE|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complex With Cyclic Hydrazine Derivatives
pdb|3BJM|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With (1s,3s,
5s)-2-[(2s)-
2-Amino-2-(3-Hydroxytricyclo[3.3.1.13,7]dec-1-
Yl)acetyl]-2- Azabicyclo[3.1.0]hexane-3-Carbonitrile
(Cas), (1s,3s,5s)-2-((2s)-2-
Amino-2-(3-Hydroxyadamantan-1-
Yl)acetyl)-2-Azabicyclo[3.1.0]hexane- 3-Carbonitrile
(Iupac), Or Bms-477118
pdb|3BJM|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With (1s,3s,
5s)-2-[(2s)-
2-Amino-2-(3-Hydroxytricyclo[3.3.1.13,7]dec-1-
Yl)acetyl]-2- Azabicyclo[3.1.0]hexane-3-Carbonitrile
(Cas), (1s,3s,5s)-2-((2s)-2-
Amino-2-(3-Hydroxyadamantan-1-
Yl)acetyl)-2-Azabicyclo[3.1.0]hexane- 3-Carbonitrile
(Iupac), Or Bms-477118
pdb|3EIO|A Chain A, Crystal Structure Analysis Of Dppiv Inhibitor
pdb|3EIO|B Chain B, Crystal Structure Analysis Of Dppiv Inhibitor
pdb|3H0C|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|3H0C|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|3KWF|A Chain A, Human Dpp-Iv With Carmegliptin
(S)-1-((2s,3s,11bs)-2-Amino-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,1-
A]isoquinolin-3-Yl)-4-Fluoromethyl-Pyrrolidin-2-One
pdb|3KWF|B Chain B, Human Dpp-Iv With Carmegliptin
(S)-1-((2s,3s,11bs)-2-Amino-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,1-
A]isoquinolin-3-Yl)-4-Fluoromethyl-Pyrrolidin-2-One
pdb|3OC0|A Chain A, Structure Of Human Dpp-Iv With Hts Hit
(2s,3s,11bs)-3-Butyl-9,10-
Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|3OC0|B Chain B, Structure Of Human Dpp-Iv With Hts Hit
(2s,3s,11bs)-3-Butyl-9,10-
Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|3KWJ|A Chain A, Strucutre Of Human Dpp-Iv With
(2s,3s,11bs)-3-(3-Fluoromethyl-Phenyl)-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|3KWJ|B Chain B, Strucutre Of Human Dpp-Iv With
(2s,3s,11bs)-3-(3-Fluoromethyl-Phenyl)-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|4DSA|A Chain A, Crystal Structure Of Dpp-iv With Compound C1
pdb|4DSA|B Chain B, Crystal Structure Of Dpp-iv With Compound C1
pdb|4DSZ|A Chain A, Crystal Structure Of Dpp-iv With Compound C2
pdb|4DSZ|B Chain B, Crystal Structure Of Dpp-iv With Compound C2
pdb|4DTC|A Chain A, Crystal Structure Of Dpp-iv With Compound C5
pdb|4DTC|B Chain B, Crystal Structure Of Dpp-iv With Compound C5
Length = 728
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 646 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 683
>pdb|4A5S|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Noval
Heterocyclic Dpp4 Inhibitor
pdb|4A5S|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A Noval
Heterocyclic Dpp4 Inhibitor
Length = 740
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 646 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 683
>pdb|3QBJ|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
pdb|3QBJ|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
Length = 748
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 654 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 691
>pdb|3Q8W|A Chain A, A B-Aminoacyl Containing Thiazolidine Derivative And Dppiv
Complex
pdb|3Q8W|B Chain B, A B-Aminoacyl Containing Thiazolidine Derivative And Dppiv
Complex
Length = 732
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 646 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 683
>pdb|3NOX|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-(6-
(Aminomethyl)-5-(2,4-Dichlorophenyl)-7-Methylimidazo[1,
2-A]pyrimidin- 2-Yl)(Morpholino)methanone
pdb|3NOX|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-(6-
(Aminomethyl)-5-(2,4-Dichlorophenyl)-7-Methylimidazo[1,
2-A]pyrimidin- 2-Yl)(Morpholino)methanone
pdb|3SWW|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3SWW|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3SX4|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3SX4|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3Q0T|A Chain A, Crystal Structure Of Human Dpp-iv In Complex Withsa-(+)-
Methyl2-(3-
(aminomethyl)-4-(2,4-dichlorophenyl)-2-methyl-
7-oxo-5h-pyrrolo[3,4- B]pyridin-6(7h)-yl)acetate
pdb|3Q0T|B Chain B, Crystal Structure Of Human Dpp-iv In Complex Withsa-(+)-
Methyl2-(3-
(aminomethyl)-4-(2,4-dichlorophenyl)-2-methyl-
7-oxo-5h-pyrrolo[3,4- B]pyridin-6(7h)-yl)acetate
Length = 753
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 648 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 685
>pdb|3CCB|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|C Chain C, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|D Chain D, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|C Chain C, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|D Chain D, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3G0B|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0C|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0D|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0G|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3O95|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O9V|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3OPM|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|4G1F|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
Length = 740
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 658 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 695
>pdb|2QJR|A Chain A, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf
pdb|2QJR|B Chain B, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf
pdb|3F8S|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
pdb|3F8S|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
Length = 748
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 654 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 691
>pdb|2JID|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4-
Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine
pdb|2JID|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4-
Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine
Length = 736
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 654 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 691
>pdb|2RIP|A Chain A, Structure Of Dppiv In Complex With An Inhibitor
Length = 729
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 647 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 684
>pdb|2ONC|A Chain A, Crystal Structure Of Human Dpp-4
pdb|2ONC|B Chain B, Crystal Structure Of Human Dpp-4
pdb|2ONC|C Chain C, Crystal Structure Of Human Dpp-4
pdb|2ONC|D Chain D, Crystal Structure Of Human Dpp-4
Length = 731
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 649 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 686
>pdb|2RGU|A Chain A, Crystal Structure Of Complex Of Human Dpp4 And Inhibitor
pdb|2RGU|B Chain B, Crystal Structure Of Complex Of Human Dpp4 And Inhibitor
Length = 734
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 646 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 683
>pdb|2QT9|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QT9|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QTB|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QTB|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
Length = 766
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 684 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 721
>pdb|2G5P|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ac
pdb|2G5P|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ac
pdb|2G5T|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ag
pdb|2G5T|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ag
pdb|2G63|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2G63|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2G63|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2G63|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2I03|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2I03|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2I03|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2I03|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2OQV|A Chain A, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidine-
Constrained Phenethylamine
pdb|2OQV|B Chain B, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidine-
Constrained Phenethylamine
pdb|2I78|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2I78|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2I78|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2I78|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2OAG|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
pdb|2OAG|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
pdb|2OAG|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
pdb|2OAG|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
Length = 726
Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 138 RITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175
R +T + R N +V +LL+HGTAD + S ++ K
Sbjct: 646 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISK 683
>pdb|1R1D|A Chain A, Structure Of A Carboxylesterase From Bacillus
Stearothermophilus
pdb|1R1D|B Chain B, Structure Of A Carboxylesterase From Bacillus
Stearothermophilus
Length = 247
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/74 (20%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 143 LQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDD 202
++ +L+ + P ++ D +P+++ ++ S K +K Y+ H + + E+D
Sbjct: 174 VRAHLDLVYAPTFVVQARHDEXINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQ 233
Query: 203 IVKDI------IDW 210
+ +DI +DW
Sbjct: 234 LHEDIYAFLESLDW 247
>pdb|3H04|A Chain A, The Crystal Structure Of The Protein With Unknown Function
From Staphylococcus Aureus Subsp. Aureus Mu50
Length = 275
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVL 50
SLD ++D+ + + + P F FG S+GA + L
Sbjct: 74 SLDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSL 111
>pdb|1ODT|C Chain C, Cephalosporin C Deacetylase Mutated, In Complex With
Acetate
pdb|1ODT|H Chain H, Cephalosporin C Deacetylase Mutated, In Complex With
Acetate
Length = 318
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 111 PEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRN---------------------LNR 149
P+A VA Y + +I V L I ++ +RN +R
Sbjct: 197 PKAAVADYPYLSNFERAIDVALEEPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADR 256
Query: 150 LKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLL--FEPER 200
+KVP L+ G D VT P + + + K +K+Y+ F H+ + F+ E+
Sbjct: 257 VKVPVLMSIGLIDKVTPPSTVFAAYNHLETK-KELKVYRYFGHEYIPAFQTEK 308
>pdb|1XZI|A Chain A, Fusarium Solani Cutinase Mutant With Thr 119 Replaced By
His
Length = 214
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 16 AAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV--LDPKFEANVAGVVL 67
AA+++M ++ P GHS GAA+ ++ LD +AG VL
Sbjct: 93 AAIREMLGLFQQANTKCPDATLIAGGHSQGAALAAASIEDLDSAIRDKIAGTVL 146
>pdb|3LOC|A Chain A, Crystal Structure Of Putative Transcriptional Regulator
Ycdc
pdb|3LOC|B Chain B, Crystal Structure Of Putative Transcriptional Regulator
Ycdc
pdb|3LOC|C Chain C, Crystal Structure Of Putative Transcriptional Regulator
Ycdc
pdb|3LOC|D Chain D, Crystal Structure Of Putative Transcriptional Regulator
Ycdc
Length = 212
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 16 AAVKDMKLFVEKVLADNPGLP-CFCFGHSTGAAIV-------LKAVLDPKFEANVAGVVL 67
AA+K+ +V D P FC GA ++ LKA++D K A +AG V
Sbjct: 92 AAIKEYIRLKLEVSRDYPQASRLFCXEXLAGAPLLXDELTGDLKALIDEK-SALIAGWVK 150
Query: 68 TSPAVGVEPSHPIFVVLA 85
+ ++P H IF + A
Sbjct: 151 SGKLAPIDPQHLIFXIWA 168
>pdb|3CN7|A Chain A, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN7|B Chain B, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN7|C Chain C, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN7|D Chain D, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN9|A Chain A, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Orthorhombic Crystal
Form
pdb|3CN9|B Chain B, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Orthorhombic Crystal
Form
Length = 226
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 136 ILRITTY------LQRNLNRLKVPFLLLHGTADTVTDPEASKKLH 174
+L ++TY L + ++P L LHG+ D V DP + H
Sbjct: 145 VLALSTYAPTFDDLALDERHKRIPVLHLHGSQDDVVDPALGRAAH 189
>pdb|1TIA|A Chain A, An Unusual Buried Polar Cluster In A Family Of Fungal
Lipases
Length = 279
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 15 DAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD 55
D +K++K +V+A NP GHS GAA+ A D
Sbjct: 121 DDIIKELK----EVVAQNPNYELVVVGHSLGAAVATLAATD 157
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,780,351
Number of Sequences: 62578
Number of extensions: 270788
Number of successful extensions: 814
Number of sequences better than 100.0: 51
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 771
Number of HSP's gapped (non-prelim): 51
length of query: 221
length of database: 14,973,337
effective HSP length: 95
effective length of query: 126
effective length of database: 9,028,427
effective search space: 1137581802
effective search space used: 1137581802
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)