Query 045548
Match_columns 221
No_of_seqs 124 out of 1086
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 03:11:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045548.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045548hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1455 Lysophospholipase [Lip 100.0 7.5E-41 1.6E-45 257.2 20.2 211 1-214 93-312 (313)
2 PLN02652 hydrolase; alpha/beta 100.0 4E-33 8.7E-38 230.5 25.2 216 1-216 174-389 (395)
3 COG2267 PldB Lysophospholipase 100.0 2.2E-33 4.7E-38 224.1 19.5 213 1-215 72-295 (298)
4 TIGR01607 PST-A Plasmodium sub 100.0 1.1E-30 2.3E-35 212.4 20.6 208 1-212 85-331 (332)
5 PLN02385 hydrolase; alpha/beta 100.0 2E-27 4.3E-32 194.9 23.3 212 1-215 126-346 (349)
6 PLN02298 hydrolase, alpha/beta 100.0 2.5E-27 5.3E-32 192.9 23.4 212 1-216 98-319 (330)
7 PHA02857 monoglyceride lipase; 100.0 4.1E-27 8.9E-32 186.9 23.9 208 1-214 63-273 (276)
8 PRK10749 lysophospholipase L2; 100.0 1E-25 2.2E-30 183.4 24.3 211 1-214 92-329 (330)
9 COG1647 Esterase/lipase [Gener 99.9 4.8E-22 1E-26 146.8 15.8 174 14-213 65-243 (243)
10 PLN02824 hydrolase, alpha/beta 99.9 8.2E-21 1.8E-25 152.2 13.0 200 1-213 66-293 (294)
11 PLN02965 Probable pheophorbida 99.9 2.3E-20 5E-25 146.7 14.4 201 1-214 41-253 (255)
12 TIGR02240 PHA_depoly_arom poly 99.9 3.4E-20 7.3E-25 147.4 15.4 201 1-215 62-267 (276)
13 PRK03592 haloalkane dehalogena 99.8 1.5E-19 3.3E-24 144.9 17.6 205 1-215 64-290 (295)
14 PRK00870 haloalkane dehalogena 99.8 2.4E-19 5.3E-24 144.2 16.7 203 1-214 84-301 (302)
15 PLN02679 hydrolase, alpha/beta 99.8 1.4E-19 3E-24 149.0 13.3 202 1-213 125-356 (360)
16 TIGR03611 RutD pyrimidine util 99.8 5.2E-19 1.1E-23 137.9 14.6 198 1-212 50-256 (257)
17 TIGR03056 bchO_mg_che_rel puta 99.8 1.9E-18 4.2E-23 136.7 14.8 200 1-212 65-278 (278)
18 PRK13604 luxD acyl transferase 99.8 3.1E-18 6.6E-23 135.5 14.2 166 2-195 77-246 (307)
19 TIGR03100 hydr1_PEP hydrolase, 99.8 5.4E-18 1.2E-22 134.6 15.7 196 1-212 68-273 (274)
20 PRK08775 homoserine O-acetyltr 99.8 3E-18 6.4E-23 140.3 14.0 203 1-214 110-339 (343)
21 PRK03204 haloalkane dehalogena 99.8 1.2E-17 2.6E-22 133.5 16.8 196 1-211 71-285 (286)
22 PRK10673 acyl-CoA esterase; Pr 99.8 8E-18 1.7E-22 131.8 14.9 197 1-213 53-254 (255)
23 TIGR01738 bioH putative pimelo 99.8 1E-17 2.2E-22 129.4 14.5 65 144-211 181-245 (245)
24 TIGR02427 protocat_pcaD 3-oxoa 99.8 1.1E-18 2.3E-23 135.2 8.9 190 1-212 50-251 (251)
25 PLN03084 alpha/beta hydrolase 99.8 2.7E-17 5.9E-22 135.7 17.2 200 1-212 164-382 (383)
26 PLN02578 hydrolase 99.8 2.6E-17 5.6E-22 135.3 16.7 199 1-212 123-353 (354)
27 TIGR03343 biphenyl_bphD 2-hydr 99.8 5.6E-18 1.2E-22 134.7 12.2 195 1-212 71-281 (282)
28 PRK06489 hypothetical protein; 99.8 2.7E-17 5.9E-22 135.5 16.6 67 144-214 285-357 (360)
29 TIGR01836 PHA_synth_III_C poly 99.8 9.5E-18 2E-22 137.7 13.3 194 13-214 113-350 (350)
30 PLN03087 BODYGUARD 1 domain co 99.8 3.4E-17 7.3E-22 138.0 16.8 202 1-213 243-478 (481)
31 PRK10349 carboxylesterase BioH 99.8 2.7E-17 5.9E-22 129.2 14.7 193 1-212 50-254 (256)
32 TIGR01250 pro_imino_pep_2 prol 99.7 2.6E-17 5.6E-22 130.2 13.0 195 1-212 64-288 (288)
33 TIGR01392 homoserO_Ac_trn homo 99.7 1.8E-16 3.8E-21 130.3 18.0 68 144-212 281-351 (351)
34 PRK07581 hypothetical protein; 99.7 7.2E-17 1.6E-21 131.9 15.0 70 144-216 268-338 (339)
35 PF12697 Abhydrolase_6: Alpha/ 99.7 1.6E-18 3.4E-23 132.1 4.9 184 1-205 35-227 (228)
36 PRK11126 2-succinyl-6-hydroxy- 99.7 4.1E-17 8.9E-22 126.9 11.6 190 1-213 38-241 (242)
37 TIGR01249 pro_imino_pep_1 prol 99.7 1.4E-16 3.1E-21 128.4 14.0 200 1-210 64-305 (306)
38 PRK06765 homoserine O-acetyltr 99.7 1.4E-15 3.1E-20 125.8 18.9 69 144-213 316-387 (389)
39 PLN02894 hydrolase, alpha/beta 99.7 1E-15 2.2E-20 127.7 18.1 70 144-216 318-387 (402)
40 KOG1454 Predicted hydrolase/ac 99.7 4.4E-16 9.6E-21 125.9 15.2 202 1-214 97-324 (326)
41 KOG4409 Predicted hydrolase/ac 99.7 4.2E-16 9.1E-21 123.1 13.9 204 1-213 127-363 (365)
42 TIGR03695 menH_SHCHC 2-succiny 99.7 9.9E-16 2.1E-20 118.3 15.7 200 1-212 38-251 (251)
43 PRK00175 metX homoserine O-ace 99.7 3.5E-15 7.7E-20 123.7 19.6 70 144-214 302-374 (379)
44 PLN02511 hydrolase 99.7 6.6E-16 1.4E-20 128.3 12.7 204 1-215 140-366 (388)
45 PRK14875 acetoin dehydrogenase 99.7 2E-15 4.4E-20 124.6 13.5 184 1-213 168-370 (371)
46 KOG4178 Soluble epoxide hydrol 99.6 6.2E-15 1.3E-19 115.9 13.8 202 1-214 82-320 (322)
47 PRK10985 putative hydrolase; P 99.6 5.5E-15 1.2E-19 120.1 13.5 188 17-214 113-320 (324)
48 PF00561 Abhydrolase_1: alpha/ 99.6 3.1E-16 6.7E-21 120.4 3.8 195 1-208 11-229 (230)
49 PLN02211 methyl indole-3-aceta 99.6 1.2E-14 2.5E-19 115.4 12.6 198 1-213 56-269 (273)
50 PLN02980 2-oxoglutarate decarb 99.6 1.2E-14 2.6E-19 138.5 14.7 200 1-216 1408-1641(1655)
51 PF00326 Peptidase_S9: Prolyl 99.6 3.3E-14 7.2E-19 108.8 13.2 163 15-217 42-212 (213)
52 PRK05855 short chain dehydroge 99.6 2.5E-14 5.4E-19 124.7 13.8 64 147-214 229-292 (582)
53 PLN02872 triacylglycerol lipas 99.6 5.5E-14 1.2E-18 116.5 15.0 200 12-216 137-391 (395)
54 KOG2382 Predicted alpha/beta h 99.6 4.7E-14 1E-18 111.0 13.1 203 1-214 91-313 (315)
55 PRK05077 frsA fermentation/res 99.6 1.3E-13 2.8E-18 115.3 16.0 62 148-215 352-413 (414)
56 KOG1552 Predicted alpha/beta h 99.6 2.7E-14 5.9E-19 108.7 10.4 153 1-215 99-253 (258)
57 PRK10566 esterase; Provisional 99.5 3.8E-13 8.2E-18 105.2 15.9 63 147-214 181-248 (249)
58 PRK07868 acyl-CoA synthetase; 99.5 9.4E-14 2E-18 127.8 12.2 68 146-215 292-362 (994)
59 PRK11071 esterase YqiA; Provis 99.5 3.1E-12 6.8E-17 96.1 13.9 55 150-212 135-189 (190)
60 COG3208 GrsT Predicted thioest 99.4 2.7E-12 5.8E-17 97.3 11.6 179 11-213 53-235 (244)
61 TIGR01838 PHA_synth_I poly(R)- 99.4 5.3E-12 1.2E-16 107.8 11.3 51 145-197 409-459 (532)
62 PF12695 Abhydrolase_5: Alpha/ 99.4 5.7E-12 1.2E-16 90.2 9.8 101 19-193 44-145 (145)
63 PRK11460 putative hydrolase; P 99.4 3.1E-11 6.7E-16 93.6 14.1 60 151-215 148-209 (232)
64 PF02230 Abhydrolase_2: Phosph 99.4 3.1E-11 6.7E-16 92.6 13.7 130 14-215 83-216 (216)
65 KOG4391 Predicted alpha/beta h 99.4 2E-12 4.4E-17 95.8 6.6 165 1-215 117-283 (300)
66 KOG4667 Predicted esterase [Li 99.3 1.3E-11 2.8E-16 91.5 10.2 181 2-215 74-259 (269)
67 KOG2984 Predicted hydrolase [G 99.3 2.3E-12 4.9E-17 94.6 4.4 182 1-214 82-276 (277)
68 KOG1838 Alpha/beta hydrolase [ 99.3 1.4E-10 3.1E-15 94.5 14.1 190 18-215 181-389 (409)
69 COG4757 Predicted alpha/beta h 99.3 9.4E-11 2E-15 87.9 10.9 181 14-211 84-280 (281)
70 TIGR01849 PHB_depoly_PhaZ poly 99.2 1.9E-10 4.1E-15 95.0 13.2 68 146-213 332-405 (406)
71 COG1506 DAP2 Dipeptidyl aminop 99.2 1.6E-10 3.4E-15 101.6 13.5 72 146-217 546-619 (620)
72 COG0596 MhpC Predicted hydrola 99.2 1.6E-10 3.5E-15 89.1 12.0 65 145-211 215-279 (282)
73 COG0429 Predicted hydrolase of 99.2 8E-11 1.7E-15 93.0 9.9 189 18-215 131-341 (345)
74 PLN02442 S-formylglutathione h 99.2 9.1E-10 2E-14 87.9 16.0 134 17-194 125-263 (283)
75 PF01738 DLH: Dienelactone hyd 99.2 4.4E-10 9.6E-15 86.3 12.5 132 14-214 75-217 (218)
76 PF08538 DUF1749: Protein of u 99.2 4.9E-11 1.1E-15 94.0 6.7 195 7-212 77-303 (303)
77 TIGR01839 PHA_synth_II poly(R) 99.2 4.8E-10 1E-14 95.4 13.1 173 12-192 265-480 (560)
78 TIGR02821 fghA_ester_D S-formy 99.2 2.4E-09 5.2E-14 85.2 15.3 150 17-214 121-274 (275)
79 PF05448 AXE1: Acetyl xylan es 99.1 9.9E-10 2.1E-14 88.8 11.1 164 14-214 152-320 (320)
80 COG2945 Predicted hydrolase of 99.1 2.1E-09 4.6E-14 78.5 10.8 133 2-212 72-205 (210)
81 PF06821 Ser_hydrolase: Serine 99.1 4.1E-09 8.8E-14 77.7 11.9 114 20-194 38-154 (171)
82 COG0400 Predicted esterase [Ge 99.0 2E-08 4.3E-13 76.0 12.3 120 19-214 81-205 (207)
83 PF08840 BAAT_C: BAAT / Acyl-C 99.0 1.4E-09 3.1E-14 83.1 6.2 70 147-216 111-212 (213)
84 TIGR03101 hydr2_PEP hydrolase, 98.9 6.9E-09 1.5E-13 81.8 8.5 69 1-73 67-135 (266)
85 PF05728 UPF0227: Uncharacteri 98.9 4.4E-08 9.5E-13 73.1 12.3 55 150-212 133-187 (187)
86 COG2021 MET2 Homoserine acetyl 98.9 2E-07 4.2E-12 75.1 16.0 67 145-213 300-367 (368)
87 TIGR01840 esterase_phb esteras 98.9 2.1E-08 4.6E-13 76.6 10.2 52 17-71 75-129 (212)
88 PLN00021 chlorophyllase 98.9 4.2E-08 9.1E-13 79.2 12.1 126 35-217 126-286 (313)
89 COG0412 Dienelactone hydrolase 98.8 1.6E-07 3.4E-12 73.0 13.9 131 15-215 90-234 (236)
90 PF10230 DUF2305: Uncharacteri 98.8 5.7E-08 1.2E-12 76.8 11.4 67 9-75 56-125 (266)
91 KOG3043 Predicted hydrolase re 98.8 3.6E-08 7.7E-13 73.9 7.5 129 14-215 99-241 (242)
92 COG3243 PhaC Poly(3-hydroxyalk 98.7 2.7E-07 5.8E-12 75.4 12.7 68 146-215 325-400 (445)
93 PF06500 DUF1100: Alpha/beta h 98.7 1.4E-07 3E-12 77.8 9.6 165 15-215 242-410 (411)
94 PRK10162 acetyl esterase; Prov 98.7 1E-06 2.3E-11 71.5 14.6 171 15-215 129-316 (318)
95 PRK05371 x-prolyl-dipeptidyl a 98.7 2E-06 4.3E-11 77.3 17.1 71 145-216 449-521 (767)
96 PF06028 DUF915: Alpha/beta hy 98.7 1.2E-06 2.5E-11 68.6 13.7 158 13-211 81-252 (255)
97 KOG2564 Predicted acetyltransf 98.6 5.9E-08 1.3E-12 75.1 5.1 67 1-69 113-179 (343)
98 COG3545 Predicted esterase of 98.6 2.4E-06 5.3E-11 61.9 12.7 118 34-213 58-178 (181)
99 PF06342 DUF1057: Alpha/beta h 98.6 3.4E-06 7.3E-11 65.8 14.0 64 1-71 73-136 (297)
100 KOG2624 Triglyceride lipase-ch 98.5 3.9E-06 8.4E-11 69.6 13.4 203 12-215 137-399 (403)
101 COG3458 Acetyl esterase (deace 98.5 2.1E-06 4.5E-11 66.4 10.8 158 16-214 155-317 (321)
102 PF03583 LIP: Secretory lipase 98.5 1.1E-05 2.4E-10 64.6 15.3 65 150-218 218-285 (290)
103 PRK10115 protease 2; Provision 98.4 1E-05 2.3E-10 72.2 15.4 163 17-217 504-678 (686)
104 COG3571 Predicted hydrolase of 98.4 3.3E-06 7.2E-11 60.3 9.7 111 15-195 73-183 (213)
105 PF07859 Abhydrolase_3: alpha/ 98.4 6E-07 1.3E-11 68.3 6.6 62 12-74 43-112 (211)
106 PLN02733 phosphatidylcholine-s 98.4 5E-07 1.1E-11 76.0 6.3 61 13-73 140-202 (440)
107 PF00975 Thioesterase: Thioest 98.4 6E-06 1.3E-10 63.6 11.0 174 11-211 45-229 (229)
108 PF07819 PGAP1: PGAP1-like pro 98.4 1.8E-06 3.9E-11 66.6 7.6 58 14-71 59-122 (225)
109 PF03096 Ndr: Ndr family; Int 98.3 5E-06 1.1E-10 65.4 9.1 188 7-213 74-278 (283)
110 PF06057 VirJ: Bacterial virul 98.3 6.6E-06 1.4E-10 60.8 9.2 141 13-213 46-191 (192)
111 PF02273 Acyl_transf_2: Acyl t 98.3 5E-05 1.1E-09 58.1 13.9 161 2-194 70-238 (294)
112 TIGR03230 lipo_lipase lipoprot 98.3 3.5E-06 7.5E-11 70.7 7.7 56 14-71 96-153 (442)
113 cd00707 Pancreat_lipase_like P 98.3 2.2E-06 4.7E-11 68.2 6.2 56 14-71 89-146 (275)
114 KOG3253 Predicted alpha/beta h 98.2 9.3E-06 2E-10 69.1 9.8 126 27-215 242-375 (784)
115 PRK04940 hypothetical protein; 98.2 0.00013 2.8E-09 53.8 14.2 52 155-213 128-179 (180)
116 cd00519 Lipase_3 Lipase (class 98.2 4.5E-06 9.7E-11 64.6 5.9 67 7-73 100-169 (229)
117 COG0657 Aes Esterase/lipase [L 98.1 3.9E-05 8.4E-10 62.1 11.1 170 13-212 125-308 (312)
118 PF08386 Abhydrolase_4: TAP-li 98.1 1E-05 2.3E-10 54.5 6.5 60 151-213 34-93 (103)
119 KOG2100 Dipeptidyl aminopeptid 98.1 6.7E-05 1.4E-09 67.6 13.3 156 18-216 589-749 (755)
120 cd00741 Lipase Lipase. Lipase 98.1 9.7E-06 2.1E-10 58.7 6.4 46 9-54 2-47 (153)
121 PF05705 DUF829: Eukaryotic pr 98.1 0.00027 5.8E-09 55.0 14.5 64 148-211 175-240 (240)
122 COG4814 Uncharacterized protei 98.1 0.00028 6.1E-09 54.3 13.7 156 14-213 115-286 (288)
123 PF02450 LCAT: Lecithin:choles 98.0 9E-06 1.9E-10 67.8 6.0 58 14-72 99-160 (389)
124 TIGR00976 /NonD putative hydro 98.0 1.1E-05 2.5E-10 70.3 6.7 69 1-73 64-133 (550)
125 KOG2931 Differentiation-relate 98.0 8.7E-05 1.9E-09 58.2 10.3 190 7-213 97-305 (326)
126 PF03959 FSH1: Serine hydrolas 98.0 8.8E-06 1.9E-10 62.2 4.7 48 148-197 158-205 (212)
127 PF01764 Lipase_3: Lipase (cla 98.0 2.1E-05 4.5E-10 55.9 5.9 65 9-73 37-107 (140)
128 KOG3975 Uncharacterized conser 98.0 9.1E-05 2E-09 56.8 9.4 59 151-211 242-300 (301)
129 KOG2112 Lysophospholipase [Lip 98.0 0.00025 5.4E-09 53.0 11.4 57 151-213 144-203 (206)
130 TIGR03502 lipase_Pla1_cef extr 97.9 5.8E-05 1.3E-09 67.5 8.0 44 12-55 520-575 (792)
131 PF11339 DUF3141: Protein of u 97.9 0.00086 1.9E-08 56.8 14.3 56 13-71 117-174 (581)
132 PF10503 Esterase_phd: Esteras 97.9 0.0003 6.5E-09 53.9 10.9 49 19-70 79-130 (220)
133 KOG4627 Kynurenine formamidase 97.9 4.3E-05 9.3E-10 56.9 5.8 138 12-196 112-250 (270)
134 COG1073 Hydrolases of the alph 97.8 7.4E-05 1.6E-09 59.2 6.8 69 147-215 227-298 (299)
135 PF09752 DUF2048: Uncharacteri 97.7 0.00059 1.3E-08 55.3 11.2 58 151-211 289-346 (348)
136 PLN02454 triacylglycerol lipas 97.7 9.4E-05 2E-09 61.3 6.1 58 16-73 207-272 (414)
137 PF12740 Chlorophyllase2: Chlo 97.7 0.0023 5.1E-08 50.0 13.4 107 36-199 92-211 (259)
138 COG2819 Predicted hydrolase of 97.6 9.7E-05 2.1E-09 57.5 4.9 55 17-75 120-175 (264)
139 PTZ00472 serine carboxypeptida 97.6 0.00019 4.2E-09 61.2 6.9 73 1-73 133-217 (462)
140 PF00756 Esterase: Putative es 97.6 0.00013 2.8E-09 57.0 5.1 55 17-75 98-153 (251)
141 COG5153 CVT17 Putative lipase 97.5 0.00021 4.7E-09 55.8 5.1 55 13-71 254-308 (425)
142 KOG4540 Putative lipase essent 97.5 0.00021 4.7E-09 55.8 5.1 55 13-71 254-308 (425)
143 PF05990 DUF900: Alpha/beta hy 97.5 0.00032 7E-09 54.4 6.0 60 14-73 72-138 (233)
144 PF05057 DUF676: Putative seri 97.4 0.00019 4.2E-09 55.1 4.4 42 12-53 53-96 (217)
145 KOG1515 Arylacetamide deacetyl 97.4 0.004 8.6E-08 50.8 11.8 171 14-214 143-335 (336)
146 PLN02517 phosphatidylcholine-s 97.4 0.00014 3E-09 62.6 3.4 58 14-71 192-262 (642)
147 PLN02571 triacylglycerol lipas 97.4 0.00047 1E-08 57.3 6.3 37 18-54 207-245 (413)
148 COG3319 Thioesterase domains o 97.4 0.00041 8.8E-09 54.4 5.5 59 12-73 45-104 (257)
149 KOG2369 Lecithin:cholesterol a 97.4 0.00029 6.3E-09 58.8 4.8 41 14-54 161-201 (473)
150 KOG2551 Phospholipase/carboxyh 97.3 0.00089 1.9E-08 50.6 6.7 63 147-215 159-221 (230)
151 PF10142 PhoPQ_related: PhoPQ- 97.3 0.023 4.9E-07 47.0 15.3 65 148-217 259-323 (367)
152 KOG2281 Dipeptidyl aminopeptid 97.3 0.0066 1.4E-07 52.8 12.3 68 146-213 797-866 (867)
153 KOG3724 Negative regulator of 97.3 0.0005 1.1E-08 60.7 5.5 33 37-69 184-217 (973)
154 PLN02847 triacylglycerol lipas 97.2 0.00044 9.6E-09 59.5 4.7 47 7-53 223-269 (633)
155 PF11187 DUF2974: Protein of u 97.1 0.0011 2.3E-08 51.1 5.3 52 20-72 70-124 (224)
156 PF01083 Cutinase: Cutinase; 97.1 0.00031 6.8E-09 52.2 2.0 60 10-69 56-119 (179)
157 COG4188 Predicted dienelactone 97.0 0.00028 6E-09 57.4 1.5 54 145-198 245-299 (365)
158 PLN02310 triacylglycerol lipas 97.0 0.001 2.2E-08 55.2 4.7 22 33-54 207-228 (405)
159 PLN00413 triacylglycerol lipas 97.0 0.0012 2.5E-08 55.7 4.9 34 20-53 269-302 (479)
160 COG4782 Uncharacterized protei 97.0 0.0017 3.8E-08 52.6 5.6 59 15-73 171-235 (377)
161 PRK10439 enterobactin/ferric e 97.0 0.0023 4.9E-08 53.9 6.6 35 36-73 289-324 (411)
162 PLN02408 phospholipase A1 97.0 0.0015 3.2E-08 53.6 5.2 38 17-54 180-219 (365)
163 PLN03037 lipase class 3 family 96.9 0.0012 2.6E-08 56.2 4.5 39 34-73 317-360 (525)
164 PF06259 Abhydrolase_8: Alpha/ 96.9 0.0038 8.3E-08 46.1 6.7 58 14-73 87-146 (177)
165 PLN02162 triacylglycerol lipas 96.9 0.0016 3.5E-08 54.8 5.0 34 20-53 263-296 (475)
166 PLN02934 triacylglycerol lipas 96.9 0.0014 3E-08 55.7 4.7 34 20-53 306-339 (515)
167 PF05677 DUF818: Chlamydia CHL 96.9 0.0027 5.8E-08 51.2 5.8 50 2-55 183-235 (365)
168 PF05577 Peptidase_S28: Serine 96.9 0.006 1.3E-07 51.8 8.3 57 13-72 88-148 (434)
169 KOG3101 Esterase D [General fu 96.8 0.0039 8.5E-08 46.9 5.8 55 14-71 120-175 (283)
170 PF01674 Lipase_2: Lipase (cla 96.7 0.0022 4.8E-08 49.1 4.3 38 16-54 57-94 (219)
171 smart00824 PKS_TE Thioesterase 96.7 0.004 8.8E-08 46.6 5.7 56 13-71 45-101 (212)
172 PLN02324 triacylglycerol lipas 96.7 0.0033 7.2E-08 52.3 5.3 38 17-54 195-234 (415)
173 PLN02719 triacylglycerol lipas 96.7 0.003 6.5E-08 53.7 5.0 38 17-54 275-317 (518)
174 PRK10252 entF enterobactin syn 96.6 0.0036 7.7E-08 60.2 5.7 57 12-71 1113-1170(1296)
175 PLN02753 triacylglycerol lipas 96.6 0.0036 7.7E-08 53.4 4.9 38 17-54 289-331 (531)
176 PLN02761 lipase class 3 family 96.6 0.004 8.7E-08 53.1 4.9 37 17-53 270-312 (527)
177 COG1075 LipA Predicted acetylt 96.5 0.0052 1.1E-07 50.4 5.4 59 13-71 105-163 (336)
178 PLN02802 triacylglycerol lipas 96.5 0.0047 1E-07 52.5 4.9 36 19-54 312-349 (509)
179 PF11288 DUF3089: Protein of u 96.5 0.0074 1.6E-07 45.6 5.4 40 15-54 74-114 (207)
180 KOG4569 Predicted lipase [Lipi 96.4 0.0046 1E-07 50.7 4.6 36 19-54 155-190 (336)
181 PF06850 PHB_depo_C: PHB de-po 96.4 0.0052 1.1E-07 45.7 4.1 66 148-213 130-201 (202)
182 PF03403 PAF-AH_p_II: Platelet 96.4 0.0032 7E-08 52.4 3.4 33 36-71 229-261 (379)
183 COG4099 Predicted peptidase [G 96.4 0.0098 2.1E-07 47.2 5.7 28 151-178 315-342 (387)
184 PF10340 DUF2424: Protein of u 96.2 0.016 3.5E-07 47.8 6.6 63 13-75 173-238 (374)
185 KOG2183 Prolylcarboxypeptidase 96.2 0.0079 1.7E-07 49.7 4.7 64 7-74 138-205 (492)
186 PF00151 Lipase: Lipase; Inte 96.2 0.012 2.7E-07 48.1 5.8 57 15-71 128-186 (331)
187 KOG4840 Predicted hydrolases o 96.0 0.0035 7.6E-08 47.5 1.4 62 12-73 84-145 (299)
188 PF02129 Peptidase_S15: X-Pro 95.5 0.052 1.1E-06 43.0 6.7 68 1-73 68-137 (272)
189 KOG1553 Predicted alpha/beta h 95.2 0.047 1E-06 44.3 5.3 36 32-71 308-344 (517)
190 COG1505 Serine proteases of th 95.1 0.095 2.1E-06 45.5 7.1 164 13-215 476-647 (648)
191 PF07224 Chlorophyllase: Chlor 95.1 0.04 8.7E-07 43.1 4.4 39 36-74 121-159 (307)
192 KOG3847 Phospholipase A2 (plat 94.9 0.017 3.7E-07 46.1 2.0 34 35-71 241-274 (399)
193 PF05277 DUF726: Protein of un 94.6 0.11 2.4E-06 42.6 6.2 40 33-72 218-260 (345)
194 COG0627 Predicted esterase [Ge 94.6 0.058 1.3E-06 43.8 4.5 57 17-75 133-190 (316)
195 COG2382 Fes Enterochelin ester 94.4 0.1 2.2E-06 41.6 5.4 49 23-73 161-213 (299)
196 PF07519 Tannase: Tannase and 94.4 0.06 1.3E-06 46.3 4.5 64 151-214 353-427 (474)
197 PF04301 DUF452: Protein of un 94.4 0.28 6E-06 37.4 7.6 37 155-196 169-205 (213)
198 cd00312 Esterase_lipase Estera 94.0 0.054 1.2E-06 46.8 3.4 56 16-71 152-212 (493)
199 PTZ00472 serine carboxypeptida 94.0 0.13 2.8E-06 44.2 5.7 62 151-213 364-458 (462)
200 PLN02213 sinapoylglucose-malat 94.0 0.21 4.6E-06 40.7 6.7 58 16-73 29-97 (319)
201 KOG2029 Uncharacterized conser 93.8 0.089 1.9E-06 45.6 4.2 50 21-70 510-570 (697)
202 PF07082 DUF1350: Protein of u 93.6 0.23 5E-06 38.6 5.8 34 34-69 89-122 (250)
203 PF00450 Peptidase_S10: Serine 93.3 0.32 7E-06 40.8 6.8 64 10-73 108-182 (415)
204 PF00450 Peptidase_S10: Serine 93.2 0.1 2.3E-06 43.8 3.8 60 152-212 331-414 (415)
205 PF12048 DUF3530: Protein of u 93.0 0.46 9.9E-06 38.6 6.9 53 17-71 176-228 (310)
206 PLN03016 sinapoylglucose-malat 92.3 0.57 1.2E-05 39.9 6.9 61 151-213 347-430 (433)
207 KOG1282 Serine carboxypeptidas 92.3 0.6 1.3E-05 39.9 6.9 62 12-73 142-214 (454)
208 PF00135 COesterase: Carboxyle 92.2 0.25 5.5E-06 42.9 4.9 57 15-71 183-244 (535)
209 COG1770 PtrB Protease II [Amin 92.1 4.2 9.1E-05 36.2 11.9 53 18-73 508-563 (682)
210 PLN02209 serine carboxypeptida 92.1 0.61 1.3E-05 39.8 6.8 61 151-213 351-434 (437)
211 PLN02633 palmitoyl protein thi 92.0 0.78 1.7E-05 37.0 6.9 61 8-73 69-133 (314)
212 PF12715 Abhydrolase_7: Abhydr 92.0 0.2 4.4E-06 41.5 3.7 31 36-70 227-258 (390)
213 COG2272 PnbA Carboxylesterase 91.8 0.27 5.9E-06 41.9 4.4 57 17-73 157-218 (491)
214 KOG1551 Uncharacterized conser 91.4 6.1 0.00013 31.3 11.2 58 154-214 309-366 (371)
215 PF08237 PE-PPE: PE-PPE domain 91.3 0.55 1.2E-05 36.2 5.3 40 12-53 27-66 (225)
216 KOG1283 Serine carboxypeptidas 90.5 0.82 1.8E-05 37.0 5.6 68 6-73 90-167 (414)
217 COG3509 LpqC Poly(3-hydroxybut 89.4 1.5 3.1E-05 35.2 6.2 50 18-70 125-177 (312)
218 PF02089 Palm_thioest: Palmito 87.8 1.8 3.8E-05 34.5 5.8 52 19-73 63-118 (279)
219 COG4287 PqaA PhoPQ-activated p 87.2 0.8 1.7E-05 37.8 3.6 48 148-196 326-373 (507)
220 PLN02606 palmitoyl-protein thi 87.0 3 6.5E-05 33.7 6.7 57 15-73 74-134 (306)
221 COG3150 Predicted esterase [Ge 86.9 1.1 2.3E-05 32.9 3.7 58 147-212 128-187 (191)
222 PF11144 DUF2920: Protein of u 86.3 2.5 5.4E-05 35.4 6.1 51 19-72 164-219 (403)
223 KOG2182 Hydrolytic enzymes of 85.0 3.7 8.1E-05 35.3 6.6 56 13-71 147-206 (514)
224 KOG1516 Carboxylesterase and r 84.4 0.44 9.6E-06 41.7 1.0 51 20-70 175-230 (545)
225 PLN03016 sinapoylglucose-malat 83.6 2 4.3E-05 36.7 4.6 58 16-73 143-211 (433)
226 KOG3967 Uncharacterized conser 83.5 3.6 7.8E-05 31.5 5.3 38 36-73 191-228 (297)
227 PLN02209 serine carboxypeptida 83.2 2.4 5.1E-05 36.3 4.8 59 15-73 144-213 (437)
228 COG4553 DepA Poly-beta-hydroxy 83.0 1.8 3.8E-05 34.7 3.7 65 151-215 339-408 (415)
229 PLN02213 sinapoylglucose-malat 81.6 4.3 9.3E-05 33.1 5.6 61 151-213 233-316 (319)
230 PF02129 Peptidase_S15: X-Pro 80.9 2.7 5.9E-05 33.2 4.2 45 146-192 223-270 (272)
231 KOG2541 Palmitoyl protein thio 80.4 5.5 0.00012 31.5 5.5 58 14-74 70-131 (296)
232 COG3946 VirJ Type IV secretory 78.9 2.5 5.3E-05 35.4 3.3 40 13-52 304-343 (456)
233 PF10081 Abhydrolase_9: Alpha/ 74.2 4.4 9.6E-05 32.3 3.5 37 36-72 110-147 (289)
234 KOG2521 Uncharacterized conser 70.5 20 0.00043 29.7 6.6 67 149-215 223-291 (350)
235 PF07519 Tannase: Tannase and 70.1 7.2 0.00016 33.8 4.2 36 36-74 116-152 (474)
236 KOG1282 Serine carboxypeptidas 66.6 30 0.00064 29.9 7.1 70 144-214 356-448 (454)
237 COG5023 Tubulin [Cytoskeleton] 66.5 7.8 0.00017 32.1 3.4 43 7-49 102-144 (443)
238 KOG2385 Uncharacterized conser 61.5 28 0.00061 30.4 5.9 39 33-71 445-486 (633)
239 COG2936 Predicted acyl esteras 59.5 21 0.00045 31.6 5.0 68 2-73 92-160 (563)
240 TIGR03131 malonate_mdcH malona 58.8 16 0.00034 29.3 4.0 19 35-53 76-94 (295)
241 COG0331 FabD (acyl-carrier-pro 58.8 14 0.0003 30.1 3.6 21 33-53 83-103 (310)
242 TIGR00128 fabD malonyl CoA-acy 55.4 19 0.00042 28.5 4.0 19 35-53 83-101 (290)
243 KOG4372 Predicted alpha/beta h 55.3 3.2 6.9E-05 34.7 -0.5 16 36-51 151-166 (405)
244 PF14253 AbiH: Bacteriophage a 54.9 6.1 0.00013 31.1 1.0 12 36-47 236-247 (270)
245 PF00698 Acyl_transf_1: Acyl t 52.6 9.8 0.00021 30.9 1.9 19 35-53 84-102 (318)
246 KOG1202 Animal-type fatty acid 51.5 34 0.00073 33.5 5.2 47 22-69 2169-2216(2376)
247 PF05576 Peptidase_S37: PS-10 51.5 38 0.00082 28.8 5.0 67 1-71 99-169 (448)
248 PF00091 Tubulin: Tubulin/FtsZ 50.6 22 0.00048 27.1 3.5 33 17-49 106-138 (216)
249 PRK03482 phosphoglycerate muta 50.5 50 0.0011 24.9 5.5 38 12-51 120-157 (215)
250 smart00827 PKS_AT Acyl transfe 50.4 13 0.00029 29.6 2.3 19 35-53 82-100 (298)
251 KOG2237 Predicted serine prote 50.3 18 0.00039 32.4 3.1 54 17-73 529-585 (712)
252 TIGR00976 /NonD putative hydro 49.0 50 0.0011 29.2 5.8 46 145-193 226-272 (550)
253 PF14606 Lipase_GDSL_3: GDSL-l 46.6 27 0.00058 26.0 3.2 30 13-42 72-101 (178)
254 cd07212 Pat_PNPLA9 Patatin-lik 45.9 17 0.00036 29.6 2.3 18 37-54 34-51 (312)
255 cd07198 Patatin Patatin-like p 41.8 46 0.001 24.2 3.9 19 36-54 27-45 (172)
256 cd07207 Pat_ExoU_VipD_like Exo 41.1 55 0.0012 24.1 4.3 31 23-54 16-46 (194)
257 TIGR02816 pfaB_fam PfaB family 41.0 40 0.00087 29.8 3.9 23 31-53 261-283 (538)
258 PF03709 OKR_DC_1_N: Orn/Lys/A 39.5 55 0.0012 22.2 3.7 27 18-44 51-77 (115)
259 PF07578 LAB_N: Lipid A Biosyn 39.1 24 0.00051 21.9 1.6 14 36-49 53-66 (72)
260 KOG2308 Phosphatidic acid-pref 38.9 17 0.00037 33.0 1.4 37 17-53 397-435 (741)
261 PF05576 Peptidase_S37: PS-10 38.8 29 0.00063 29.5 2.6 61 147-212 347-412 (448)
262 cd07209 Pat_hypo_Ecoli_Z1214_l 38.0 55 0.0012 24.9 3.9 31 24-55 16-46 (215)
263 PF13289 SIR2_2: SIR2-like dom 37.1 76 0.0017 21.8 4.3 14 34-47 86-99 (143)
264 cd01836 FeeA_FeeB_like SGNH_hy 36.3 63 0.0014 23.6 4.0 28 13-40 85-112 (191)
265 PLN02752 [acyl-carrier protein 36.1 30 0.00065 28.4 2.4 18 36-53 125-142 (343)
266 cd07227 Pat_Fungal_NTE1 Fungal 35.9 63 0.0014 25.7 4.0 19 37-55 40-58 (269)
267 cd01820 PAF_acetylesterase_lik 35.9 68 0.0015 24.1 4.1 29 13-41 107-135 (214)
268 COG2939 Carboxypeptidase C (ca 35.7 35 0.00077 29.6 2.7 58 13-71 171-235 (498)
269 PRK10279 hypothetical protein; 34.4 63 0.0014 26.2 3.9 19 36-54 34-52 (300)
270 cd01844 SGNH_hydrolase_like_6 33.7 74 0.0016 23.0 3.9 25 16-40 75-99 (177)
271 COG0069 GltB Glutamate synthas 33.2 69 0.0015 27.9 4.0 30 4-37 277-306 (485)
272 cd04506 SGNH_hydrolase_YpmR_li 33.1 67 0.0014 23.8 3.7 29 14-42 101-129 (204)
273 COG3887 Predicted signaling pr 33.0 1.2E+02 0.0026 27.2 5.4 48 17-70 322-376 (655)
274 cd00286 Tubulin_FtsZ Tubulin/F 32.8 67 0.0014 26.2 3.9 39 8-46 62-100 (328)
275 cd04502 SGNH_hydrolase_like_7 32.8 94 0.002 22.2 4.3 29 13-41 68-96 (171)
276 PF06500 DUF1100: Alpha/beta h 32.3 67 0.0015 27.3 3.8 63 151-214 189-255 (411)
277 cd02651 nuc_hydro_IU_UC_XIUA n 32.0 74 0.0016 25.7 3.9 49 21-72 101-151 (302)
278 cd01833 XynB_like SGNH_hydrola 32.0 87 0.0019 21.9 4.0 28 13-40 58-85 (157)
279 cd01825 SGNH_hydrolase_peri1 S 31.8 87 0.0019 22.6 4.1 29 13-41 75-103 (189)
280 smart00824 PKS_TE Thioesterase 31.6 36 0.00078 24.8 2.0 60 149-210 151-211 (212)
281 PF10605 3HBOH: 3HB-oligomer h 31.5 91 0.002 28.0 4.5 36 37-74 287-323 (690)
282 TIGR03162 ribazole_cobC alpha- 31.5 96 0.0021 22.4 4.2 32 12-43 115-146 (177)
283 KOG3734 Predicted phosphoglyce 31.1 1E+02 0.0022 24.6 4.4 42 12-53 172-213 (272)
284 PF12715 Abhydrolase_7: Abhydr 31.0 15 0.00032 30.8 -0.2 37 151-189 306-343 (390)
285 cd07208 Pat_hypo_Ecoli_yjju_li 30.9 92 0.002 24.4 4.3 18 37-54 29-46 (266)
286 COG0420 SbcD DNA repair exonuc 30.6 68 0.0015 26.9 3.6 23 145-167 69-91 (390)
287 COG0740 ClpP Protease subunit 30.5 81 0.0017 23.9 3.6 38 17-54 40-77 (200)
288 cd07213 Pat17_PNPLA8_PNPLA9_li 30.1 90 0.0019 25.0 4.1 18 37-54 36-53 (288)
289 cd01841 NnaC_like NnaC (CMP-Ne 30.1 1E+02 0.0022 22.0 4.2 28 13-40 69-96 (174)
290 cd07225 Pat_PNPLA6_PNPLA7 Pata 29.7 46 0.00099 27.0 2.4 19 36-54 44-62 (306)
291 PRK15004 alpha-ribazole phosph 29.6 1E+02 0.0022 23.0 4.1 33 12-44 119-151 (199)
292 PRK13462 acid phosphatase; Pro 29.5 1.2E+02 0.0026 22.8 4.6 32 12-43 117-148 (203)
293 PRK09955 rihB ribonucleoside h 29.3 1.2E+02 0.0025 24.8 4.7 48 22-72 105-154 (313)
294 PF01734 Patatin: Patatin-like 29.1 92 0.002 22.2 3.8 21 35-55 27-47 (204)
295 KOG1374 Gamma tubulin [Cytoske 28.9 80 0.0017 26.6 3.5 47 1-48 96-145 (448)
296 PF03283 PAE: Pectinacetyleste 28.9 96 0.0021 25.9 4.2 33 21-53 140-174 (361)
297 cd07217 Pat17_PNPLA8_PNPLA9_li 28.7 47 0.001 27.5 2.3 17 38-54 44-60 (344)
298 PRK13463 phosphatase PhoE; Pro 28.6 99 0.0021 23.2 3.9 32 12-43 121-152 (203)
299 cd07205 Pat_PNPLA6_PNPLA7_NTE1 28.3 1.2E+02 0.0026 21.9 4.3 19 36-54 29-47 (175)
300 cd07204 Pat_PNPLA_like Patatin 28.3 92 0.002 24.3 3.8 17 38-54 34-50 (243)
301 cd07211 Pat_PNPLA8 Patatin-lik 28.1 47 0.001 26.8 2.2 17 38-54 44-60 (308)
302 PRK12551 ATP-dependent Clp pro 28.1 1.2E+02 0.0026 22.9 4.2 39 15-53 36-74 (196)
303 cd07210 Pat_hypo_W_succinogene 28.0 1.1E+02 0.0024 23.4 4.1 19 36-54 29-47 (221)
304 cd07218 Pat_iPLA2 Calcium-inde 27.8 98 0.0021 24.2 3.8 17 38-54 33-49 (245)
305 cd00455 nuc_hydro nuc_hydro: N 27.4 77 0.0017 25.5 3.3 47 23-72 101-149 (295)
306 KOG2088 Predicted lipase/calmo 27.3 56 0.0012 29.3 2.6 26 28-53 245-270 (596)
307 PF12740 Chlorophyllase2: Chlo 27.2 2.9E+02 0.0063 22.0 6.3 62 151-215 16-78 (259)
308 PF08257 Sulfakinin: Sulfakini 27.1 34 0.00074 12.0 0.5 6 188-193 2-7 (9)
309 cd01828 sialate_O-acetylestera 27.1 1.2E+02 0.0027 21.5 4.2 27 14-40 67-93 (169)
310 PF09994 DUF2235: Uncharacteri 27.1 1.3E+02 0.0028 24.0 4.5 34 20-53 76-110 (277)
311 TIGR01203 HGPRTase hypoxanthin 26.2 2E+02 0.0044 20.9 5.1 40 13-52 4-43 (166)
312 PF08477 Miro: Miro-like prote 26.0 1.2E+02 0.0025 19.9 3.7 24 19-42 93-116 (119)
313 PRK14513 ATP-dependent Clp pro 25.9 1.1E+02 0.0023 23.3 3.6 40 15-54 38-77 (201)
314 COG1957 URH1 Inosine-uridine n 25.8 1.8E+02 0.0039 23.8 5.1 52 20-74 103-156 (311)
315 PRK11789 N-acetyl-anhydromuran 25.8 78 0.0017 23.7 2.8 30 15-44 129-158 (185)
316 COG3675 Predicted lipase [Lipi 25.6 37 0.00081 27.3 1.1 42 25-67 164-208 (332)
317 PRK06193 hypothetical protein; 25.1 98 0.0021 23.6 3.3 30 13-44 136-165 (206)
318 PF09949 DUF2183: Uncharacteri 25.0 96 0.0021 20.6 2.9 41 23-66 53-96 (100)
319 PRK08644 thiamine biosynthesis 25.0 2.7E+02 0.0059 21.1 5.8 58 8-70 1-60 (212)
320 cd02189 delta_tubulin The tubu 25.0 83 0.0018 27.1 3.2 41 8-48 99-139 (446)
321 cd01406 SIR2-like Sir2-like: P 24.9 1.2E+02 0.0027 23.3 4.0 48 1-51 143-196 (242)
322 cd06059 Tubulin The tubulin su 24.4 88 0.0019 26.2 3.2 41 8-48 62-102 (382)
323 PLN00220 tubulin beta chain; P 24.4 87 0.0019 27.0 3.2 42 7-48 102-143 (447)
324 PTZ00387 epsilon tubulin; Prov 24.1 1.1E+02 0.0025 26.5 3.9 41 8-48 104-144 (465)
325 PRK10768 ribonucleoside hydrol 24.0 1.4E+02 0.0031 24.1 4.3 47 23-72 105-153 (304)
326 cd07228 Pat_NTE_like_bacteria 24.0 1.4E+02 0.0031 21.6 4.0 19 36-54 29-47 (175)
327 cd01819 Patatin_and_cPLA2 Pata 24.0 1.5E+02 0.0033 21.1 4.0 18 36-53 29-46 (155)
328 cd01823 SEST_like SEST_like. A 23.9 1.1E+02 0.0024 23.7 3.6 29 13-41 125-153 (259)
329 cd01838 Isoamyl_acetate_hydrol 23.9 1.4E+02 0.0031 21.6 4.1 29 13-41 86-114 (199)
330 CHL00028 clpP ATP-dependent Cl 23.7 1.3E+02 0.0029 22.7 3.8 40 15-54 41-80 (200)
331 cd03145 GAT1_cyanophycinase Ty 23.7 3.3E+02 0.0072 20.7 6.6 23 154-176 2-24 (217)
332 cd07222 Pat_PNPLA4 Patatin-lik 23.5 1.2E+02 0.0027 23.6 3.7 19 37-55 33-51 (246)
333 cd07220 Pat_PNPLA2 Patatin-lik 23.4 1.3E+02 0.0027 23.7 3.7 19 36-54 37-55 (249)
334 TIGR00583 mre11 DNA repair pro 23.4 56 0.0012 27.8 1.9 17 149-165 108-124 (405)
335 PRK10443 rihA ribonucleoside h 23.1 1.4E+02 0.0031 24.2 4.1 49 22-73 105-155 (311)
336 KOG2565 Predicted hydrolases o 23.0 1.7E+02 0.0036 24.9 4.4 63 149-215 402-464 (469)
337 cd02187 beta_tubulin The tubul 22.9 1.1E+02 0.0024 26.1 3.6 41 8-48 102-142 (425)
338 PLN02238 hypoxanthine phosphor 22.6 2.4E+02 0.0052 21.0 5.0 40 12-51 12-51 (189)
339 cd07221 Pat_PNPLA3 Patatin-lik 22.6 1.3E+02 0.0029 23.6 3.7 18 37-54 34-51 (252)
340 PTZ00335 tubulin alpha chain; 22.4 1E+02 0.0022 26.7 3.2 41 8-48 105-145 (448)
341 COG3673 Uncharacterized conser 22.3 1.2E+02 0.0026 25.1 3.4 31 33-69 120-150 (423)
342 PF08484 Methyltransf_14: C-me 22.3 2.9E+02 0.0062 20.0 5.2 51 16-71 52-103 (160)
343 TIGR03712 acc_sec_asp2 accesso 22.1 1.1E+02 0.0025 26.6 3.4 34 36-73 358-391 (511)
344 PTZ00010 tubulin beta chain; P 22.1 1E+02 0.0023 26.5 3.3 41 8-48 103-143 (445)
345 cd07216 Pat17_PNPLA8_PNPLA9_li 22.0 64 0.0014 26.1 1.9 16 38-53 45-60 (309)
346 cd01831 Endoglucanase_E_like E 22.0 2.7E+02 0.0058 19.8 5.1 28 13-40 75-102 (169)
347 cd02654 nuc_hydro_CjNH nuc_hyd 21.9 2.2E+02 0.0048 23.2 5.0 46 24-72 119-166 (318)
348 PRK11148 cyclic 3',5'-adenosin 21.7 2.6E+02 0.0057 22.0 5.3 19 145-163 79-97 (275)
349 COG1752 RssA Predicted esteras 21.5 1.5E+02 0.0032 23.9 4.0 19 36-54 40-58 (306)
350 PF06490 FleQ: Flagellar regul 21.2 1.4E+02 0.0031 19.9 3.2 27 20-46 55-81 (109)
351 COG3023 ampD N-acetyl-anhydrom 21.1 86 0.0019 24.7 2.3 29 15-43 125-154 (257)
352 cd02186 alpha_tubulin The tubu 20.9 1.2E+02 0.0025 26.1 3.3 41 8-48 104-144 (434)
353 PF01645 Glu_synthase: Conserv 20.8 1.3E+02 0.0028 25.3 3.5 22 18-39 187-208 (368)
354 PF08885 GSCFA: GSCFA family; 20.8 1.6E+02 0.0035 23.2 3.8 25 13-37 146-170 (251)
355 cd04121 Rab40 Rab40 subfamily. 20.7 1.9E+02 0.0041 21.4 4.1 25 17-41 93-117 (189)
356 PF02044 Bombesin: Bombesin-li 20.3 21 0.00046 14.3 -0.6 7 39-45 5-11 (14)
357 PF03629 DUF303: Domain of unk 20.3 1.4E+02 0.003 23.3 3.4 36 1-42 151-188 (255)
358 PF09370 TIM-br_sig_trns: TIM- 20.2 85 0.0018 25.0 2.1 54 12-71 192-249 (268)
359 cd07199 Pat17_PNPLA8_PNPLA9_li 20.2 83 0.0018 24.6 2.2 17 38-54 37-53 (258)
No 1
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=7.5e-41 Score=257.20 Aligned_cols=211 Identities=45% Similarity=0.725 Sum_probs=183.8
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHH--HhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCC-
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKV--LADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEP- 76 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~--~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~- 76 (221)
||+|+|.++|+++++.+++|+..+.+.+ +.+++++|.||+||||||+|++.++. +|+ -.+|+|+++|+..+.+
T Consensus 93 hG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~---~w~G~ilvaPmc~i~~~ 169 (313)
T KOG1455|consen 93 HGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN---FWDGAILVAPMCKISED 169 (313)
T ss_pred CCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc---ccccceeeecccccCCc
Confidence 8999999999999999999999999974 45788999999999999999999876 564 6899999999876654
Q ss_pred --CccHHHHHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcE
Q 045548 77 --SHPIFVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPF 154 (221)
Q Consensus 77 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 154 (221)
..|....+++.+..+.|++...+.........++++.......||+++.+..++++++++++...++.++++++++|.
T Consensus 170 ~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPf 249 (313)
T KOG1455|consen 170 TKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPF 249 (313)
T ss_pred cCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccE
Confidence 345677788888888888764332211123578888888888999999999999999999999999999999999999
Q ss_pred EEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCC-C--CChHHHHHHHHHHHHHh
Q 045548 155 LLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLF-E--PERDDIVKDIIDWLCCR 214 (221)
Q Consensus 155 Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~-e--~~~~~v~~~i~~fl~~~ 214 (221)
|++||++|.+++++.++.+++.+.+.+|++++|||++|.++. | ++.+.|+.+|++||+++
T Consensus 250 lilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 250 LILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred EEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999885 3 46899999999999986
No 2
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=4e-33 Score=230.50 Aligned_cols=216 Identities=62% Similarity=1.052 Sum_probs=172.1
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccH
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPI 80 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~ 80 (221)
||+|++..++.++++.+++|+..+++.+..++++.|++++||||||.+++.++.+|+.+++++++|+.+|+....+..++
T Consensus 174 hG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~~~~~~~~ 253 (395)
T PLN02652 174 HGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALRVKPAHPI 253 (395)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcccccccchHH
Confidence 89999988888899999999999999999888888999999999999999887766544589999999998776544343
Q ss_pred HHHHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecC
Q 045548 81 FVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGT 160 (221)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~ 160 (221)
.....+++....|.+.+..........+++++.....+.+|+.+.+..+..+..++.+..+++.+.+.++++|+|++||+
T Consensus 254 ~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~ 333 (395)
T PLN02652 254 VGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGT 333 (395)
T ss_pred HHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeC
Confidence 33344444444555444332222234456666666667788877666666666666666566677889999999999999
Q ss_pred CCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhhc
Q 045548 161 ADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRVH 216 (221)
Q Consensus 161 ~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~~ 216 (221)
+|.++|++.++++++++.+.++++++|+|++|++++|++++++++++.+||..++.
T Consensus 334 ~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 334 ADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 99999999999999998777789999999999999998899999999999998763
No 3
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=100.00 E-value=2.2e-33 Score=224.12 Aligned_cols=213 Identities=32% Similarity=0.498 Sum_probs=166.7
Q ss_pred CCCCC-CcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCC---
Q 045548 1 HGGSD-GLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEP--- 76 (221)
Q Consensus 1 hG~S~-~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~--- 76 (221)
||+|. +.+|++.+|+++++|+..+++.+...+++.|++|+||||||+|++.++.+. +.+++|+||+||+++...
T Consensus 72 hG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~--~~~i~~~vLssP~~~l~~~~~ 149 (298)
T COG2267 72 HGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARY--PPRIDGLVLSSPALGLGGAIL 149 (298)
T ss_pred CCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhC--CccccEEEEECccccCChhHH
Confidence 89999 999999999999999999999999888999999999999999999998642 248999999999988764
Q ss_pred CccHHHHHHHHHHhhcCCCcccc---ccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHH-HHHHhCCCCCC
Q 045548 77 SHPIFVVLAPIVSFLLPRYQISA---ANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITT-YLQRNLNRLKV 152 (221)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~ 152 (221)
..+...........+.|.+.+.. .+...-..+++++.+..+..||++..+.....+......... .......++++
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~ 229 (298)
T COG2267 150 RLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIAL 229 (298)
T ss_pred HHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccC
Confidence 11112222222222333333322 012222468899888888899986666666666555444333 22334667899
Q ss_pred cEEEeecCCCcccC-hHHHHHHHHHcCCCCceEEEcCCcccccCCCCCh--HHHHHHHHHHHHHhh
Q 045548 153 PFLLLHGTADTVTD-PEASKKLHKYASSADKTMKLYQGFLHDLLFEPER--DDIVKDIIDWLCCRV 215 (221)
Q Consensus 153 P~Lii~G~~D~iv~-~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~--~~v~~~i~~fl~~~~ 215 (221)
|+|+++|++|++|+ .+.+.++++++...++++++|+|++|++++|.++ +++++++.+|+.+..
T Consensus 230 PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 230 PVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred CEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 99999999999999 7999999999988889999999999999999988 999999999999875
No 4
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.98 E-value=1.1e-30 Score=212.43 Aligned_cols=208 Identities=23% Similarity=0.433 Sum_probs=160.4
Q ss_pred CCCCCCc---ccccCCHHHHHHHHHHHHHHHHh-------------------cCC-CCCeEEEecchhHHHHHHHhc-CC
Q 045548 1 HGGSDGL---HAYVHSLDAAVKDMKLFVEKVLA-------------------DNP-GLPCFCFGHSTGAAIVLKAVL-DP 56 (221)
Q Consensus 1 hG~S~~~---~g~~~~~~~~~~dl~~~~~~~~~-------------------~~~-~~p~~l~GhSmGG~ia~~~a~-~~ 56 (221)
||+|++. +|++.+++++++|+..+++.+++ ++| +.|++|+||||||++++.+++ .+
T Consensus 85 HG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 85 HGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred cCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhc
Confidence 8999874 77778999999999999999876 466 789999999999999998874 33
Q ss_pred CCC-----CCccEEEEeCCcccCCCC--------ccHHHHHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCC
Q 045548 57 KFE-----ANVAGVVLTSPAVGVEPS--------HPIFVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLV 123 (221)
Q Consensus 57 ~~~-----~~i~~lil~sp~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (221)
+.. ..++|+|++||++.+... ......+...+..+.|.+.+.. ..+.++++.....+..||++
T Consensus 165 ~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~Dp~~ 240 (332)
T TIGR01607 165 KSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK----KIRYEKSPYVNDIIKFDKFR 240 (332)
T ss_pred cccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC----ccccccChhhhhHHhcCccc
Confidence 211 258999999998654211 0112223334444555543321 12455666666677789998
Q ss_pred cCCCcchhHHHHHHHHHHHHHHhCCCC--CCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChH
Q 045548 124 YTGSIRVRTGYEILRITTYLQRNLNRL--KVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERD 201 (221)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~ 201 (221)
+.+.++.++..++.+..+.+...+.++ ++|+|++||++|.+++++.++.+++++.+.++++++|+|++|+++.|.+++
T Consensus 241 ~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~ 320 (332)
T TIGR01607 241 YDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNE 320 (332)
T ss_pred cCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHH
Confidence 776777888888877776666666666 799999999999999999999999988777899999999999999998899
Q ss_pred HHHHHHHHHHH
Q 045548 202 DIVKDIIDWLC 212 (221)
Q Consensus 202 ~v~~~i~~fl~ 212 (221)
++++++.+||+
T Consensus 321 ~v~~~i~~wL~ 331 (332)
T TIGR01607 321 EVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHHhh
Confidence 99999999986
No 5
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=2e-27 Score=194.86 Aligned_cols=212 Identities=33% Similarity=0.533 Sum_probs=140.9
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhc--CCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCC
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLAD--NPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPS 77 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~--~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~ 77 (221)
||.|++++++..+++.+++|+.++++.+..+ +++.|++|+||||||.+++.++. +| ++++|+||++|+......
T Consensus 126 ~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p---~~v~glVLi~p~~~~~~~ 202 (349)
T PLN02385 126 FGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQP---NAWDGAILVAPMCKIADD 202 (349)
T ss_pred CCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCc---chhhheeEeccccccccc
Confidence 8999998888889999999999999988653 34568999999999999999875 44 479999999997653221
Q ss_pred ---ccHHHHHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcE
Q 045548 78 ---HPIFVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPF 154 (221)
Q Consensus 78 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 154 (221)
.+........+....+...............++.........+...+..........++++....+...+.++++|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~ 282 (349)
T PLN02385 203 VVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPL 282 (349)
T ss_pred ccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCE
Confidence 11111222222222232211110000000112211111111111222222233444455544445567788999999
Q ss_pred EEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCC---hHHHHHHHHHHHHHhh
Q 045548 155 LLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPE---RDDIVKDIIDWLCCRV 215 (221)
Q Consensus 155 Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~---~~~v~~~i~~fl~~~~ 215 (221)
|++||++|.++|++.++.+++.+.+.+++++++++++|.++.|.. .++|+++|++||+++.
T Consensus 283 Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 283 LILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 999999999999999999999987667899999999999887632 4569999999999875
No 6
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=2.5e-27 Score=192.93 Aligned_cols=212 Identities=37% Similarity=0.647 Sum_probs=145.5
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhc--CCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCC
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLAD--NPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPS 77 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~--~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~ 77 (221)
||.|++.+++..+++.+++|+.++++.+... .++.|++|+||||||++++.++. +| ++++++|+++|+......
T Consensus 98 hG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~ 174 (330)
T PLN02298 98 HGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANP---EGFDGAVLVAPMCKISDK 174 (330)
T ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCc---ccceeEEEecccccCCcc
Confidence 8999988887789999999999999999764 34568999999999999998875 44 479999999997654321
Q ss_pred c--cH-HHHHHHHHHhhcCCCccccccCCCCCC-CCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCc
Q 045548 78 H--PI-FVVLAPIVSFLLPRYQISAANKNGMPV-SRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVP 153 (221)
Q Consensus 78 ~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 153 (221)
. ++ ......++..+.+....... ...... ............++..+.+.....+..++.+..+...+.+.++++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 253 (330)
T PLN02298 175 IRPPWPIPQILTFVARFLPTLAIVPT-ADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIP 253 (330)
T ss_pred cCCchHHHHHHHHHHHHCCCCccccC-CCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCC
Confidence 1 11 11122233333333211110 000000 1111111112234544433333334445555545556778899999
Q ss_pred EEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCC-CC--hHHHHHHHHHHHHHhhc
Q 045548 154 FLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFE-PE--RDDIVKDIIDWLCCRVH 216 (221)
Q Consensus 154 ~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e-~~--~~~v~~~i~~fl~~~~~ 216 (221)
+|++||++|.++|++.++++++.++..++++++++|++|+++.+ ++ ++++.+++.+||.+.+.
T Consensus 254 vLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 254 FIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred EEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999877678999999999999875 33 47789999999999873
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=99.96 E-value=4.1e-27 Score=186.93 Aligned_cols=208 Identities=27% Similarity=0.475 Sum_probs=142.7
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccH
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPI 80 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~ 80 (221)
||.|++..+...++...++|+..+++.+....+..|++|+||||||.+++.++.. .+++++++||++|+..... .+.
T Consensus 63 ~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~--~p~~i~~lil~~p~~~~~~-~~~ 139 (276)
T PHA02857 63 HGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYK--NPNLFTAMILMSPLVNAEA-VPR 139 (276)
T ss_pred CCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHh--CccccceEEEecccccccc-ccH
Confidence 8999886655668888899999999888777777789999999999999998753 1347999999999765321 122
Q ss_pred HHHHHHH-HHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeec
Q 045548 81 FVVLAPI-VSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHG 159 (221)
Q Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G 159 (221)
...+... .....+...... ........+.........+|+.........+...+......+.+.+.++++|+|++||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G 217 (276)
T PHA02857 140 LNLLAAKLMGIFYPNKIVGK--LCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQG 217 (276)
T ss_pred HHHHHHHHHHHhCCCCccCC--CCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEec
Confidence 1111111 111111111100 0000123333344444556654332233333334433334456678899999999999
Q ss_pred CCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCC--hHHHHHHHHHHHHHh
Q 045548 160 TADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPE--RDDIVKDIIDWLCCR 214 (221)
Q Consensus 160 ~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~--~~~v~~~i~~fl~~~ 214 (221)
++|.++|++.++++.+.+.. ++++++++++||.++.|.+ ++++++++.+||+++
T Consensus 218 ~~D~i~~~~~~~~l~~~~~~-~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 218 TNNEISDVSGAYYFMQHANC-NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCCCcCChHHHHHHHHHccC-CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999999999988754 5799999999999998854 899999999999986
No 8
>PRK10749 lysophospholipase L2; Provisional
Probab=99.95 E-value=1e-25 Score=183.43 Aligned_cols=211 Identities=19% Similarity=0.269 Sum_probs=139.7
Q ss_pred CCCCCCc-----ccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccC
Q 045548 1 HGGSDGL-----HAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGV 74 (221)
Q Consensus 1 hG~S~~~-----~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~ 74 (221)
||.|+++ +|+..+++.+++|+..+++.+....+..|++++||||||.+++.++. +| +.++++|+++|+.+.
T Consensus 92 ~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p---~~v~~lvl~~p~~~~ 168 (330)
T PRK10749 92 QGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHP---GVFDAIALCAPMFGI 168 (330)
T ss_pred CCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCC---CCcceEEEECchhcc
Confidence 8999753 45567899999999999998876666679999999999999998875 44 479999999998664
Q ss_pred CCCcc--HHHHHHHHHHhh---cCCCccccccCC-----CCCCCCCHHH----HHHHhCCCCCcCCCcchhHHHHHHHHH
Q 045548 75 EPSHP--IFVVLAPIVSFL---LPRYQISAANKN-----GMPVSRDPEA----LVAKYTDPLVYTGSIRVRTGYEILRIT 140 (221)
Q Consensus 75 ~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (221)
....+ ........+... ............ ...++.+++. ......+|.+..+.....+..+.....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (330)
T PRK10749 169 VLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAG 248 (330)
T ss_pred CCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHH
Confidence 32211 111111111110 000000000000 0012333322 222334554322223334444443333
Q ss_pred HHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCC-----CCceEEEcCCcccccCCCCC--hHHHHHHHHHHHHH
Q 045548 141 TYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASS-----ADKTMKLYQGFLHDLLFEPE--RDDIVKDIIDWLCC 213 (221)
Q Consensus 141 ~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~-----~~~~~~~~~~~~H~i~~e~~--~~~v~~~i~~fl~~ 213 (221)
..+...+.++++|+|+|||++|++||++.++.+++.++. .++++++|+|++|++++|.+ +++++++|.+||++
T Consensus 249 ~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 249 EQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred HHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 344567888999999999999999999999988887642 35689999999999999875 89999999999987
Q ss_pred h
Q 045548 214 R 214 (221)
Q Consensus 214 ~ 214 (221)
+
T Consensus 329 ~ 329 (330)
T PRK10749 329 H 329 (330)
T ss_pred c
Confidence 5
No 9
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.89 E-value=4.8e-22 Score=146.81 Aligned_cols=174 Identities=20% Similarity=0.236 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHH-hcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhc
Q 045548 14 LDAAVKDMKLFVEKVL-ADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLL 92 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~-~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~ 92 (221)
.++-.+|+.+..+.++ ..++ .|+++|-||||++++.+|.+- .++++|.++++.+..........+..++..
T Consensus 65 ~~DW~~~v~d~Y~~L~~~gy~--eI~v~GlSmGGv~alkla~~~----p~K~iv~m~a~~~~k~~~~iie~~l~y~~~-- 136 (243)
T COG1647 65 PRDWWEDVEDGYRDLKEAGYD--EIAVVGLSMGGVFALKLAYHY----PPKKIVPMCAPVNVKSWRIIIEGLLEYFRN-- 136 (243)
T ss_pred HHHHHHHHHHHHHHHHHcCCC--eEEEEeecchhHHHHHHHhhC----CccceeeecCCcccccchhhhHHHHHHHHH--
Confidence 3444566666777776 3444 499999999999999998642 379998887766644332222222222211
Q ss_pred CCCccccccCCCCCCCCCHHHHHHHh---C-CCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChH
Q 045548 93 PRYQISAANKNGMPVSRDPEALVAKY---T-DPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPE 168 (221)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~ 168 (221)
+ +. ....+.+...+.+ . .|+ .....+..+.+.++..+..|..|+++++|.+|+.||.+
T Consensus 137 --~--kk------~e~k~~e~~~~e~~~~~~~~~--------~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~ 198 (243)
T COG1647 137 --A--KK------YEGKDQEQIDKEMKSYKDTPM--------TTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAE 198 (243)
T ss_pred --h--hh------ccCCCHHHHHHHHHHhhcchH--------HHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHH
Confidence 0 00 0122333332222 1 122 22234555566778889999999999999999999999
Q ss_pred HHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 169 ASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
++..+++.+.+.+|++++|+++||.|.++.++++|.+++++||+.
T Consensus 199 sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 199 SANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999963
No 10
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=8.2e-21 Score=152.18 Aligned_cols=200 Identities=16% Similarity=0.182 Sum_probs=117.0
Q ss_pred CCCCCCcc------cccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCccc
Q 045548 1 HGGSDGLH------AYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 1 hG~S~~~~------g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~ 73 (221)
||.|+.+. ...++++++++|+.++++.+.. .+++|+||||||.+++.++. +| ++|+++|+++|...
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~----~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lili~~~~~ 138 (294)
T PLN02824 66 YGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVG----DPAFVICNSVGGVVGLQAAVDAP---ELVRGVMLINISLR 138 (294)
T ss_pred CCCCCCCccccccccccCCHHHHHHHHHHHHHHhcC----CCeEEEEeCHHHHHHHHHHHhCh---hheeEEEEECCCcc
Confidence 78998653 2346899999999999998754 36999999999999999986 44 48999999987542
Q ss_pred CC--CCcc-HHH----HHHHHHH------hhcCCCcc----ccc-cC-CCCCCCCCHHHHHHHhCCCCCcCCCcchhHHH
Q 045548 74 VE--PSHP-IFV----VLAPIVS------FLLPRYQI----SAA-NK-NGMPVSRDPEALVAKYTDPLVYTGSIRVRTGY 134 (221)
Q Consensus 74 ~~--~~~~-~~~----~~~~~~~------~~~~~~~~----~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (221)
.. ...+ ... .+...+. .+...... ... .. .......+.+.. ..+..+....+ ......
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~ 215 (294)
T PLN02824 139 GLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELV-EAILRPGLEPG--AVDVFL 215 (294)
T ss_pred cccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHH-HHHHhccCCch--HHHHHH
Confidence 11 0011 111 1111110 00000000 000 00 000000011111 11111111000 000111
Q ss_pred HHHHHH--HHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 135 EILRIT--TYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 135 ~~~~~~--~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
.+.... ....+.++++++|+|+|+|++|.++|.+.++.+.+.++ ..++++++++||..+.| .++++.+.|.+|++
T Consensus 216 ~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 292 (294)
T PLN02824 216 DFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDA--VEDFIVLPGVGHCPQDE-APELVNPLIESFVA 292 (294)
T ss_pred HHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCC--ccceEEeCCCCCChhhh-CHHHHHHHHHHHHh
Confidence 111000 01134577899999999999999999999888655443 46899999999988776 67889999999997
Q ss_pred H
Q 045548 213 C 213 (221)
Q Consensus 213 ~ 213 (221)
+
T Consensus 293 ~ 293 (294)
T PLN02824 293 R 293 (294)
T ss_pred c
Confidence 5
No 11
>PLN02965 Probable pheophorbidase
Probab=99.85 E-value=2.3e-20 Score=146.69 Aligned_cols=201 Identities=15% Similarity=0.132 Sum_probs=117.8
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccH
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPI 80 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~ 80 (221)
||.|+.+.+..++++.+++|+.++++.+.. +.+++|+||||||.+++.++.+ ++++|+++|++++........+.
T Consensus 41 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvGhSmGG~ia~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~ 115 (255)
T PLN02965 41 AGISLTDSNTVSSSDQYNRPLFALLSDLPP---DHKVILVGHSIGGGSVTEALCK--FTDKISMAIYVAAAMVKPGSIIS 115 (255)
T ss_pred CCCCCCCccccCCHHHHHHHHHHHHHhcCC---CCCEEEEecCcchHHHHHHHHh--CchheeEEEEEccccCCCCCCcc
Confidence 799987654456899999999999998642 2379999999999999999863 13489999998864211100000
Q ss_pred HHHHHHHHHhhcCCCcc--ccccCCCC-CCCCCHHHHHHH-hCCC-CC-------cCCCcchhHHHHHHHHHHHHHHhCC
Q 045548 81 FVVLAPIVSFLLPRYQI--SAANKNGM-PVSRDPEALVAK-YTDP-LV-------YTGSIRVRTGYEILRITTYLQRNLN 148 (221)
Q Consensus 81 ~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~-~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (221)
................ ........ ......+..... +.+. .. ............. ......+.
T Consensus 116 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 190 (255)
T PLN02965 116 -PRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDL----DKLPPNPE 190 (255)
T ss_pred -HHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhh----hhccchhh
Confidence 0000000000000000 00000000 000001111011 1110 00 0000000000000 11122455
Q ss_pred CCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 149 RLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 149 ~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
++++|+|+++|++|.++|++.++.+.+.+++ .++++++++||..+.| +++++++.|.+|++..
T Consensus 191 ~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~--a~~~~i~~~GH~~~~e-~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 191 AEKVPRVYIKTAKDNLFDPVRQDVMVENWPP--AQTYVLEDSDHSAFFS-VPTTLFQYLLQAVSSL 253 (255)
T ss_pred cCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc--ceEEEecCCCCchhhc-CHHHHHHHHHHHHHHh
Confidence 7999999999999999999999999988875 4889999999998887 6899999999998764
No 12
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.85 E-value=3.4e-20 Score=147.36 Aligned_cols=201 Identities=17% Similarity=0.225 Sum_probs=119.5
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCC--CCc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVE--PSH 78 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~--~~~ 78 (221)
||.|+.+.+. .+++.+++|+.++++.+.. .+++|+||||||.+++++|.+ .+++++++||++|+.... +..
T Consensus 62 ~G~S~~~~~~-~~~~~~~~~~~~~i~~l~~----~~~~LvG~S~GG~va~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~ 134 (276)
T TIGR02240 62 VGGSSTPRHP-YRFPGLAKLAARMLDYLDY----GQVNAIGVSWGGALAQQFAHD--YPERCKKLILAATAAGAVMVPGK 134 (276)
T ss_pred CCCCCCCCCc-CcHHHHHHHHHHHHHHhCc----CceEEEEECHHHHHHHHHHHH--CHHHhhheEEeccCCccccCCCc
Confidence 8999876543 5799999999999999843 269999999999999999863 134899999999865421 111
Q ss_pred cHHH-HHHHHHHhhcCCCcccc-ccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHH-HHHHhCCCCCCcEE
Q 045548 79 PIFV-VLAPIVSFLLPRYQISA-ANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITT-YLQRNLNRLKVPFL 155 (221)
Q Consensus 79 ~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~P~L 155 (221)
+... ..........+...... ..........+++.... ......... ............. .....+.++++|+|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~i~~P~l 211 (276)
T TIGR02240 135 PKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELAMA-HASKVRSGG--KLGYYWQLFAGLGWTSIHWLHKIQQPTL 211 (276)
T ss_pred hhHHHHhcCchhhhccccccchhhhhccceeeccchhhhh-hhhhcccCC--CchHHHHHHHHcCCchhhHhhcCCCCEE
Confidence 1100 00000000000000000 00000000011111111 110010000 1111111111111 11245788999999
Q ss_pred EeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhh
Q 045548 156 LLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 156 ii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
+|+|++|+++|++.++++.+.++. .+++++++ ||+.+.| .++++++.|.+|+++..
T Consensus 212 ii~G~~D~~v~~~~~~~l~~~~~~--~~~~~i~~-gH~~~~e-~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 212 VLAGDDDPIIPLINMRLLAWRIPN--AELHIIDD-GHLFLIT-RAEAVAPIIMKFLAEER 267 (276)
T ss_pred EEEeCCCCcCCHHHHHHHHHhCCC--CEEEEEcC-CCchhhc-cHHHHHHHHHHHHHHhh
Confidence 999999999999999999888864 68888886 9988876 67899999999998763
No 13
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.84 E-value=1.5e-19 Score=144.88 Aligned_cols=205 Identities=13% Similarity=0.144 Sum_probs=116.9
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCC--C
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEP--S 77 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~--~ 77 (221)
||.|+.+... ++++.+++|+..+++.+.. .+++++||||||.+++.++. +| ++++++|+++|...... .
T Consensus 64 ~G~S~~~~~~-~~~~~~a~dl~~ll~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lil~~~~~~~~~~~~ 135 (295)
T PRK03592 64 MGASDKPDID-YTFADHARYLDAWFDALGL----DDVVLVGHDWGSALGFDWAARHP---DRVRGIAFMEAIVRPMTWDD 135 (295)
T ss_pred CCCCCCCCCC-CCHHHHHHHHHHHHHHhCC----CCeEEEEECHHHHHHHHHHHhCh---hheeEEEEECCCCCCcchhh
Confidence 7999876433 4899999999999998754 36999999999999999876 44 48999999997433211 0
Q ss_pred cc-HHHHHHHHHHhhc--CCC-----cccc-ccCCCCCCCCCHHHHHH---HhCCCCCcCCCcch-------hHHHHHHH
Q 045548 78 HP-IFVVLAPIVSFLL--PRY-----QISA-ANKNGMPVSRDPEALVA---KYTDPLVYTGSIRV-------RTGYEILR 138 (221)
Q Consensus 78 ~~-~~~~~~~~~~~~~--~~~-----~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------~~~~~~~~ 138 (221)
.+ ........+.... ..+ .+.. ...........++.+.. .+.++......... ........
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (295)
T PRK03592 136 FPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVA 215 (295)
T ss_pred cchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHh
Confidence 00 0111111111000 000 0000 00000000011111111 11111100000000 00000111
Q ss_pred HHHHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhh
Q 045548 139 ITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 139 ~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
........+.++++|+|+|||++|.++++....++...... +.++++++++||..+.| .++++.+.|.+|+++..
T Consensus 216 ~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e-~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 216 LVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPN-QLEITVFGAGLHFAQED-SPEEIGAAIAAWLRRLR 290 (295)
T ss_pred hhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhh-hcceeeccCcchhhhhc-CHHHHHHHHHHHHHHhc
Confidence 11122455788999999999999999966666565544322 46899999999999877 57999999999998653
No 14
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.83 E-value=2.4e-19 Score=144.22 Aligned_cols=203 Identities=16% Similarity=0.169 Sum_probs=114.7
Q ss_pred CCCCCCccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCC-
Q 045548 1 HGGSDGLHA-YVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPS- 77 (221)
Q Consensus 1 hG~S~~~~g-~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~- 77 (221)
||.|+.+.. ...+++.+++|+.++++++.. .+++++||||||.+++.++. +| ++++++|+++|.......
T Consensus 84 ~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~ 156 (302)
T PRK00870 84 FGRSDKPTRREDYTYARHVEWMRSWFEQLDL----TDVTLVCQDWGGLIGLRLAAEHP---DRFARLVVANTGLPTGDGP 156 (302)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHcCC----CCEEEEEEChHHHHHHHHHHhCh---hheeEEEEeCCCCCCcccc
Confidence 799976532 235899999999999988643 36999999999999999875 44 489999999874321110
Q ss_pred cc-HHHHHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCC-CcchhHHH---------HHHHHHHHHHHh
Q 045548 78 HP-IFVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTG-SIRVRTGY---------EILRITTYLQRN 146 (221)
Q Consensus 78 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~ 146 (221)
.+ .......+. ...+..................+.... +..+..... ....+... ............
T Consensus 157 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (302)
T PRK00870 157 MPDAFWAWRAFS-QYSPVLPVGRLVNGGTVRDLSDAVRAA-YDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAV 234 (302)
T ss_pred chHHHhhhhccc-ccCchhhHHHHhhccccccCCHHHHHH-hhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHh
Confidence 00 000000000 000000000000000000011111111 111100000 00000000 000011112345
Q ss_pred CCCCCCcEEEeecCCCcccChHHHHHHHHHcCCC-CceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 147 LNRLKVPFLLLHGTADTVTDPEASKKLHKYASSA-DKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 147 ~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~-~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
+.++++|+|+|||++|.++|... +++.+.++.. .+++.+++++||.++.| .++++.+.|.+|+++.
T Consensus 235 l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 235 LERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQED-SGEELAEAVLEFIRAT 301 (302)
T ss_pred hhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhh-ChHHHHHHHHHHHhcC
Confidence 78899999999999999999876 7777777643 23478999999998776 5689999999999753
No 15
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.82 E-value=1.4e-19 Score=149.05 Aligned_cols=202 Identities=20% Similarity=0.264 Sum_probs=113.8
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCc-
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSH- 78 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~- 78 (221)
||.|+.+.+..++++.+++|+.++++.+.. .+++|+||||||.+++.++. ++ +++|+++||++|........
T Consensus 125 ~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~~--P~rV~~LVLi~~~~~~~~~~~ 198 (360)
T PLN02679 125 FGASDKPPGFSYTMETWAELILDFLEEVVQ----KPTVLIGNSVGSLACVIAASEST--RDLVRGLVLLNCAGGMNNKAV 198 (360)
T ss_pred CCCCCCCCCccccHHHHHHHHHHHHHHhcC----CCeEEEEECHHHHHHHHHHHhcC--hhhcCEEEEECCccccccccc
Confidence 799987654446889999999999997643 36999999999999988764 21 34899999998754321100
Q ss_pred --cHH-HHHHHH---HHhhc--CCCc---ccccc---------CCC-CCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHH
Q 045548 79 --PIF-VVLAPI---VSFLL--PRYQ---ISAAN---------KNG-MPVSRDPEALVAKYTDPLVYTGSIRVRTGYEIL 137 (221)
Q Consensus 79 --~~~-~~~~~~---~~~~~--~~~~---~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (221)
.+. ....+. +.... +... +.... ... .......+.....+..+....+. ........
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 276 (360)
T PLN02679 199 VDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGA--LDAFVSIV 276 (360)
T ss_pred cchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCCh--HHHHHHHH
Confidence 000 000000 00000 0000 00000 000 00000011111111112111110 01111111
Q ss_pred HH--HHHHHHhCCCCCCcEEEeecCCCcccChHHH-----HHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHH
Q 045548 138 RI--TTYLQRNLNRLKVPFLLLHGTADTVTDPEAS-----KKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDW 210 (221)
Q Consensus 138 ~~--~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~-----~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~f 210 (221)
.. .......++++++|+|++||++|+++|++.. +.+.+.++ +.++++++++||..+.| .++++++.|.+|
T Consensus 277 ~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip--~~~l~~i~~aGH~~~~E-~Pe~~~~~I~~F 353 (360)
T PLN02679 277 TGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLP--NVTLYVLEGVGHCPHDD-RPDLVHEKLLPW 353 (360)
T ss_pred hcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCC--ceEEEEcCCCCCCcccc-CHHHHHHHHHHH
Confidence 00 0012345778999999999999999998732 23334444 47899999999988776 689999999999
Q ss_pred HHH
Q 045548 211 LCC 213 (221)
Q Consensus 211 l~~ 213 (221)
|++
T Consensus 354 L~~ 356 (360)
T PLN02679 354 LAQ 356 (360)
T ss_pred HHh
Confidence 976
No 16
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.82 E-value=5.2e-19 Score=137.90 Aligned_cols=198 Identities=18% Similarity=0.215 Sum_probs=116.6
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCcc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHP 79 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~ 79 (221)
||.|++......++++.++|+.++++.+.. .+++++||||||.+++.++. +| +.++++|+++++....+...
T Consensus 50 ~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~G~S~Gg~~a~~~a~~~~---~~v~~~i~~~~~~~~~~~~~ 122 (257)
T TIGR03611 50 TGRSPGELPPGYSIAHMADDVLQLLDALNI----ERFHFVGHALGGLIGLQLALRYP---ERLLSLVLINAWSRPDPHTR 122 (257)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHHHHhCC----CcEEEEEechhHHHHHHHHHHCh---HHhHHheeecCCCCCChhHH
Confidence 788987544456899999999999987743 36999999999999999875 33 37999999987544321110
Q ss_pred -HHHHHHHHHHhhcCCCccccccC----CCCCCCCCHHHHHHHhCCCCC-cCCCcchhHHHHHHH-HHH-HHHHhCCCCC
Q 045548 80 -IFVVLAPIVSFLLPRYQISAANK----NGMPVSRDPEALVAKYTDPLV-YTGSIRVRTGYEILR-ITT-YLQRNLNRLK 151 (221)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~-~~~~~~~~i~ 151 (221)
.......++... ....+..... ..................... +.+. ........ ... .....+.+++
T Consensus 123 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~ 198 (257)
T TIGR03611 123 RCFDVRIALLQHA-GPEAYVHAQALFLYPADWISENAARLAADEAHALAHFPGK---ANVLRRINALEAFDVSARLDRIQ 198 (257)
T ss_pred HHHHHHHHHHhcc-CcchhhhhhhhhhccccHhhccchhhhhhhhhcccccCcc---HHHHHHHHHHHcCCcHHHhcccC
Confidence 000011111100 0000000000 000000000000000000000 0000 00011000 000 1234577899
Q ss_pred CcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 152 VPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 152 ~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
+|+|+++|++|.++|++.++++++.+++ .+++.++++||..+.+ +++++.+.|.+||+
T Consensus 199 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 199 HPVLLIANRDDMLVPYTQSLRLAAALPN--AQLKLLPYGGHASNVT-DPETFNRALLDFLK 256 (257)
T ss_pred ccEEEEecCcCcccCHHHHHHHHHhcCC--ceEEEECCCCCCcccc-CHHHHHHHHHHHhc
Confidence 9999999999999999999998888764 5888999999987765 78889999999986
No 17
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.80 E-value=1.9e-18 Score=136.69 Aligned_cols=200 Identities=22% Similarity=0.268 Sum_probs=114.1
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCC-cc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPS-HP 79 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~-~~ 79 (221)
||.|+.+.....+++.+++|+.++++.+.. .+++|+||||||.+++.++.. ++++++++|++++....... ..
T Consensus 65 ~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~----~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~~v~~~~~~~~~~~~~~ 138 (278)
T TIGR03056 65 HGFTRAPFRFRFTLPSMAEDLSALCAAEGL----SPDGVIGHSAGAAIALRLALD--GPVTPRMVVGINAALMPFEGMAG 138 (278)
T ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHcCC----CCceEEEECccHHHHHHHHHh--CCcccceEEEEcCcccccccccc
Confidence 789987655446899999999999987532 368999999999999998763 13479999998875432110 00
Q ss_pred -HHHHHHHHHHh--hcCCCccc-cccCCCCC-----CC--CCHHHHHHHhCCCCCcCCCcchhHHHHHHHHH--HHHHHh
Q 045548 80 -IFVVLAPIVSF--LLPRYQIS-AANKNGMP-----VS--RDPEALVAKYTDPLVYTGSIRVRTGYEILRIT--TYLQRN 146 (221)
Q Consensus 80 -~~~~~~~~~~~--~~~~~~~~-~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 146 (221)
........+.. ..+..... ........ .. .+.... ..+.+... .........+..... ......
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 215 (278)
T TIGR03056 139 TLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGM-TYYGRLIR--SPAHVDGALSMMAQWDLAPLNRD 215 (278)
T ss_pred cccchhhHhhhhcccchHHHHhhcccCcchhHHhhccccccccchh-hHHHHhhc--CchhhhHHHHHhhcccccchhhh
Confidence 00000000000 00000000 00000000 00 000000 00000000 000000011110000 012345
Q ss_pred CCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 147 LNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 147 ~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
++++++|+|+++|++|.++|++.++++.+.++ +.+++.++++||.++.| +++++.+.|.+|++
T Consensus 216 ~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e-~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 216 LPRITIPLHLIAGEEDKAVPPDESKRAATRVP--TATLHVVPGGGHLVHEE-QADGVVGLILQAAE 278 (278)
T ss_pred cccCCCCEEEEEeCCCcccCHHHHHHHHHhcc--CCeEEEECCCCCccccc-CHHHHHHHHHHHhC
Confidence 77899999999999999999999998887765 46899999999988776 57899999999984
No 18
>PRK13604 luxD acyl transferase; Provisional
Probab=99.79 E-value=3.1e-18 Score=135.54 Aligned_cols=166 Identities=12% Similarity=0.104 Sum_probs=102.7
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccHH
Q 045548 2 GGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPIF 81 (221)
Q Consensus 2 G~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~~ 81 (221)
|.|+|..... ++....+|+..++++++... ..++.|+||||||++++.+|... +++++|+.+|...... ..
T Consensus 77 GeS~G~~~~~-t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~~----~v~~lI~~sp~~~l~d---~l 147 (307)
T PRK13604 77 GLSSGTIDEF-TMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINEI----DLSFLITAVGVVNLRD---TL 147 (307)
T ss_pred CCCCCccccC-cccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcCC----CCCEEEEcCCcccHHH---HH
Confidence 8898865443 55567899999999998764 34799999999999998776532 4899999999865421 11
Q ss_pred HHHHHHHHhhc---CCCccccc-cCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEe
Q 045548 82 VVLAPIVSFLL---PRYQISAA-NKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLL 157 (221)
Q Consensus 82 ~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii 157 (221)
...+.... |....+.. ...+..+.. ...+...+. ..+.. .....+.+++++.|+|+|
T Consensus 148 ---~~~~~~~~~~~p~~~lp~~~d~~g~~l~~-~~f~~~~~~--------------~~~~~-~~s~i~~~~~l~~PvLiI 208 (307)
T PRK13604 148 ---ERALGYDYLSLPIDELPEDLDFEGHNLGS-EVFVTDCFK--------------HGWDT-LDSTINKMKGLDIPFIAF 208 (307)
T ss_pred ---HHhhhcccccCcccccccccccccccccH-HHHHHHHHh--------------cCccc-cccHHHHHhhcCCCEEEE
Confidence 11111000 10000000 000000000 000000000 00000 001123466788999999
Q ss_pred ecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccC
Q 045548 158 HGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLL 195 (221)
Q Consensus 158 ~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~ 195 (221)
||++|.+||++.++++++.+.+.+++++.+||++|++.
T Consensus 209 HG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 209 TANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred EcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 99999999999999999998777899999999999863
No 19
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.79 E-value=5.4e-18 Score=134.61 Aligned_cols=196 Identities=17% Similarity=0.191 Sum_probs=116.5
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCC-CeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCcc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGL-PCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHP 79 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~-p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~ 79 (221)
||.|++.. .+++...+|+.++++.++.+.++. +++++||||||.+++.++..+ .+++++|+++|+........
T Consensus 68 ~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~---~~v~~lil~~p~~~~~~~~~ 141 (274)
T TIGR03100 68 MGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD---LRVAGLVLLNPWVRTEAAQA 141 (274)
T ss_pred CCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC---CCccEEEEECCccCCcccch
Confidence 78887642 467788999999999998765443 599999999999999887543 37999999999755322111
Q ss_pred HHHHHHHHHHh-hcCCCccccccCCC-CCCCCCHHHHHHHh--CCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEE
Q 045548 80 IFVVLAPIVSF-LLPRYQISAANKNG-MPVSRDPEALVAKY--TDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFL 155 (221)
Q Consensus 80 ~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 155 (221)
.. ....++.. .... .+......+ ..+......+.... ..+. +....... ....+.+.+.++++|+|
T Consensus 142 ~~-~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~l~~~~~P~l 211 (274)
T TIGR03100 142 AS-RIRHYYLGQLLSA-DFWRKLLSGEVNLGSSLRGLGDALLKARQK---GDEVAHGG-----LAERMKAGLERFQGPVL 211 (274)
T ss_pred HH-HHHHHHHHHHhCh-HHHHHhcCCCccHHHHHHHHHHHHHhhhhc---CCCcccch-----HHHHHHHHHHhcCCcEE
Confidence 10 11111110 0000 000000000 00000001111100 0000 00111111 22334556777899999
Q ss_pred EeecCCCcccChHH-----HHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 156 LLHGTADTVTDPEA-----SKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 156 ii~G~~D~iv~~~~-----~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
+++|+.|.+.+.-. ++++.+.+.+.++++..+++++|.++.|..++++.+.|.+||+
T Consensus 212 l~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 212 FILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred EEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 99999999864221 1333444555678999999999988888889999999999996
No 20
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.79 E-value=3e-18 Score=140.35 Aligned_cols=203 Identities=18% Similarity=0.182 Sum_probs=112.6
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCcc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHP 79 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~ 79 (221)
||.|... .++++++++|+.++++.+..+ .+++|+||||||.+++.+|. +| ++++++||+++.....+...
T Consensus 110 ~g~s~~~---~~~~~~~a~dl~~ll~~l~l~---~~~~lvG~SmGG~vA~~~A~~~P---~~V~~LvLi~s~~~~~~~~~ 180 (343)
T PRK08775 110 ADGSLDV---PIDTADQADAIALLLDALGIA---RLHAFVGYSYGALVGLQFASRHP---ARVRTLVVVSGAHRAHPYAA 180 (343)
T ss_pred CCCCCCC---CCCHHHHHHHHHHHHHHcCCC---cceEEEEECHHHHHHHHHHHHCh---HhhheEEEECccccCCHHHH
Confidence 5655422 246788999999999987542 23579999999999999876 44 48999999987543221100
Q ss_pred HHHHHHHHHHhhcCCCccc-c----ccCCCCCCCCCHHHHHHHhCCCC-CcCC-------------------CcchhHHH
Q 045548 80 IFVVLAPIVSFLLPRYQIS-A----ANKNGMPVSRDPEALVAKYTDPL-VYTG-------------------SIRVRTGY 134 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------------~~~~~~~~ 134 (221)
................... . ............+.....+.... .... ........
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 260 (343)
T PRK08775 181 AWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYL 260 (343)
T ss_pred HHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHH
Confidence 0010001100000000000 0 00000000001111111111000 0000 00000000
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCC-cccccCCCCChHHHHHHHHHHHHH
Q 045548 135 EILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQG-FLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 135 ~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
.+..........+.+|++|+|+++|++|.++|++.++++.+.+.. +.+++++++ +||..+.| +++++.+.|.+||.+
T Consensus 261 ~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p-~a~l~~i~~~aGH~~~lE-~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 261 RLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGP-RGSLRVLRSPYGHDAFLK-ETDRIDAILTTALRS 338 (343)
T ss_pred HHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC-CCeEEEEeCCccHHHHhc-CHHHHHHHHHHHHHh
Confidence 111000000123678999999999999999999998888888732 468999985 99999998 689999999999976
Q ss_pred h
Q 045548 214 R 214 (221)
Q Consensus 214 ~ 214 (221)
.
T Consensus 339 ~ 339 (343)
T PRK08775 339 T 339 (343)
T ss_pred c
Confidence 5
No 21
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.78 E-value=1.2e-17 Score=133.47 Aligned_cols=196 Identities=16% Similarity=0.209 Sum_probs=109.5
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCcc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHP 79 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~ 79 (221)
||.|+.+....++++.+.+++..+++++.. .+++++||||||.+++.++. +| ++++++|+++|.........
T Consensus 71 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~va~~~a~~~p---~~v~~lvl~~~~~~~~~~~~ 143 (286)
T PRK03204 71 FGLSERPSGFGYQIDEHARVIGEFVDHLGL----DRYLSMGQDWGGPISMAVAVERA---DRVRGVVLGNTWFWPADTLA 143 (286)
T ss_pred CCCCCCCCccccCHHHHHHHHHHHHHHhCC----CCEEEEEECccHHHHHHHHHhCh---hheeEEEEECccccCCCchh
Confidence 788987644345788889999988887632 36999999999999999875 44 48999999887542211100
Q ss_pred HHHHHHHHH------Hhhc-CCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHH-----H---HHHHHH
Q 045548 80 IFVVLAPIV------SFLL-PRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEIL-----R---ITTYLQ 144 (221)
Q Consensus 80 ~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~ 144 (221)
. .....+. .... .................+.+.... +....... ..+...... . ....+.
T Consensus 144 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T PRK03204 144 M-KAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAH-YRAVQPNA---AARRGVAEMPKQILAARPLLARLA 218 (286)
T ss_pred H-HHHHHHhccccchhhhhhhhHHHHHhccccccCCCCHHHHHH-hcCCCCCH---HHHHHHHHHHHhcchhhHHHHHhh
Confidence 0 0000000 0000 000000000000000011111111 11111100 000000000 0 001111
Q ss_pred HhCCC--CCCcEEEeecCCCcccChH-HHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHH
Q 045548 145 RNLNR--LKVPFLLLHGTADTVTDPE-ASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWL 211 (221)
Q Consensus 145 ~~~~~--i~~P~Lii~G~~D~iv~~~-~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl 211 (221)
..+.+ +++|+|+|||++|.++++. .++.+.+.++. .++++++++||.++.| .++++.+.|.+|+
T Consensus 219 ~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~--~~~~~i~~aGH~~~~e-~Pe~~~~~i~~~~ 285 (286)
T PRK03204 219 REVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPD--HVLVELPNAKHFIQED-APDRIAAAIIERF 285 (286)
T ss_pred hhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCC--CeEEEcCCCccccccc-CHHHHHHHHHHhc
Confidence 12222 2899999999999998765 46777777764 6999999999998776 6899999999997
No 22
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.78 E-value=8e-18 Score=131.83 Aligned_cols=197 Identities=16% Similarity=0.122 Sum_probs=111.9
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc--ccCCCCc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA--VGVEPSH 78 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~--~~~~~~~ 78 (221)
||.|+.... .+++++++|+.++++.+.. .+++|+||||||.+++.++.+ ++++|+++|++++. .......
T Consensus 53 ~G~s~~~~~--~~~~~~~~d~~~~l~~l~~----~~~~lvGhS~Gg~va~~~a~~--~~~~v~~lvli~~~~~~~~~~~~ 124 (255)
T PRK10673 53 HGLSPRDPV--MNYPAMAQDLLDTLDALQI----EKATFIGHSMGGKAVMALTAL--APDRIDKLVAIDIAPVDYHVRRH 124 (255)
T ss_pred CCCCCCCCC--CCHHHHHHHHHHHHHHcCC----CceEEEEECHHHHHHHHHHHh--CHhhcceEEEEecCCCCccchhh
Confidence 788887654 4889999999999998743 359999999999999998753 13479999997532 1111000
Q ss_pred c-HHHHHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCc--chhHHHHHHHHHHHHHHhCCCCCCcEE
Q 045548 79 P-IFVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSI--RVRTGYEILRITTYLQRNLNRLKVPFL 155 (221)
Q Consensus 79 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~P~L 155 (221)
. ......................... .. ..+.........+. .+.. ......+..... ...+.++++++|+|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l 199 (255)
T PRK10673 125 DEIFAAINAVSEAGATTRQQAAAIMRQ-HL--NEEGVIQFLLKSFV-DGEWRFNVPVLWDQYPHI-VGWEKIPAWPHPAL 199 (255)
T ss_pred HHHHHHHHHhhhcccccHHHHHHHHHH-hc--CCHHHHHHHHhcCC-cceeEeeHHHHHHhHHHH-hCCcccCCCCCCeE
Confidence 0 0000000000000000000000000 00 00111110000000 0000 000000100000 01134567899999
Q ss_pred EeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 156 LLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 156 ii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
+|+|++|.+++.+.++.+.+.++ +.+++++++++|....| .++++.+.+.+||.+
T Consensus 200 ~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~-~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 200 FIRGGNSPYVTEAYRDDLLAQFP--QARAHVIAGAGHWVHAE-KPDAVLRAIRRYLND 254 (255)
T ss_pred EEECCCCCCCCHHHHHHHHHhCC--CcEEEEeCCCCCeeecc-CHHHHHHHHHHHHhc
Confidence 99999999999999998888766 46889999999987765 578899999999975
No 23
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.77 E-value=1e-17 Score=129.38 Aligned_cols=65 Identities=18% Similarity=0.339 Sum_probs=57.4
Q ss_pred HHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHH
Q 045548 144 QRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWL 211 (221)
Q Consensus 144 ~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl 211 (221)
...+.++++|+|+++|++|.++|++..+.+.+.++ +.++++++++||..+.| +++++.+.|.+|+
T Consensus 181 ~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fi 245 (245)
T TIGR01738 181 RQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP--HSELYIFAKAAHAPFLS-HAEAFCALLVAFK 245 (245)
T ss_pred HHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC--CCeEEEeCCCCCCcccc-CHHHHHHHHHhhC
Confidence 45678899999999999999999999988888776 46899999999999887 6899999999985
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.77 E-value=1.1e-18 Score=135.23 Aligned_cols=190 Identities=18% Similarity=0.209 Sum_probs=113.1
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccH
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPI 80 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~ 80 (221)
||.|+..... .+++..++|+.++++.+.. .+++++||||||.+++.+|... +++++++|+++|.........+
T Consensus 50 ~G~s~~~~~~-~~~~~~~~~~~~~i~~~~~----~~v~liG~S~Gg~~a~~~a~~~--p~~v~~li~~~~~~~~~~~~~~ 122 (251)
T TIGR02427 50 HGLSDAPEGP-YSIEDLADDVLALLDHLGI----ERAVFCGLSLGGLIAQGLAARR--PDRVRALVLSNTAAKIGTPESW 122 (251)
T ss_pred CCCCCCCCCC-CCHHHHHHHHHHHHHHhCC----CceEEEEeCchHHHHHHHHHHC--HHHhHHHhhccCccccCchhhH
Confidence 6888765433 4889999999999987743 3699999999999999887531 2479999998875432211111
Q ss_pred HHHHH------------HHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCC
Q 045548 81 FVVLA------------PIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLN 148 (221)
Q Consensus 81 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (221)
..... ..+..++ .. .. .............. +................ .....+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~ 190 (251)
T TIGR02427 123 NARIAAVRAEGLAALADAVLERWF-----TP----GF-REAHPARLDLYRNM-LVRQPPDGYAGCCAAIR-DADFRDRLG 190 (251)
T ss_pred HHHHhhhhhccHHHHHHHHHHHHc-----cc----cc-ccCChHHHHHHHHH-HHhcCHHHHHHHHHHHh-cccHHHHhh
Confidence 11000 0000000 00 00 00011110000000 00000000000000000 011234567
Q ss_pred CCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 149 RLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 149 ~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
++++|+|+++|++|.++|.+..+.+.+.++ +.+++++++++|.++.+ .++++.+.+.+|+.
T Consensus 191 ~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~-~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 191 AIAVPTLCIAGDQDGSTPPELVREIADLVP--GARFAEIRGAGHIPCVE-QPEAFNAALRDFLR 251 (251)
T ss_pred hcCCCeEEEEeccCCcCChHHHHHHHHhCC--CceEEEECCCCCccccc-ChHHHHHHHHHHhC
Confidence 889999999999999999999888888775 46899999999998876 57889999999873
No 25
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.77 E-value=2.7e-17 Score=135.73 Aligned_cols=200 Identities=16% Similarity=0.168 Sum_probs=117.7
Q ss_pred CCCCCCccc---ccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCC-
Q 045548 1 HGGSDGLHA---YVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEP- 76 (221)
Q Consensus 1 hG~S~~~~g---~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~- 76 (221)
||.|+.+.. ..++++.+++|+.++++++..+ +++|+||||||.+++.++.. ++++++++|+++|......
T Consensus 164 ~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~----~~~LvG~s~GG~ia~~~a~~--~P~~v~~lILi~~~~~~~~~ 237 (383)
T PLN03084 164 FGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSD----KVSLVVQGYFSPPVVKYASA--HPDKIKKLILLNPPLTKEHA 237 (383)
T ss_pred CCCCCCCcccccccCCHHHHHHHHHHHHHHhCCC----CceEEEECHHHHHHHHHHHh--ChHhhcEEEEECCCCccccc
Confidence 799987642 3468999999999999998543 59999999999999998763 2348999999998743221
Q ss_pred CccH-HHHHHH-HHHhhcCCCccccc--c-CCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHH--------HHH
Q 045548 77 SHPI-FVVLAP-IVSFLLPRYQISAA--N-KNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRIT--------TYL 143 (221)
Q Consensus 77 ~~~~-~~~~~~-~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 143 (221)
..+. ...... +...++....+... . ......... +.....+..++...+.... ....+.+.. ..+
T Consensus 238 ~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~-~l~~~~r~~~~~l~~~~~~l 315 (383)
T PLN03084 238 KLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMK-EDDAMVYRRPYLTSGSSGF-ALNAISRSMKKELKKYIEEM 315 (383)
T ss_pred cchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCC-HHHHHHHhccccCCcchHH-HHHHHHHHhhcccchhhHHH
Confidence 1111 110101 01100000000000 0 000000011 1122223333322211100 001111111 011
Q ss_pred HHhC--CCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 144 QRNL--NRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 144 ~~~~--~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
...+ .++++|+|++||++|.+++.+.++++.+.. +.+++++++++|.++.| .++++++.|.+||.
T Consensus 316 ~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~---~a~l~vIp~aGH~~~~E-~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 316 RSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKSS---QHKLIELPMAGHHVQED-CGEELGGIISGILS 382 (383)
T ss_pred HhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHhc---CCeEEEECCCCCCcchh-CHHHHHHHHHHHhh
Confidence 1111 358999999999999999999988877752 46899999999988776 68999999999986
No 26
>PLN02578 hydrolase
Probab=99.77 E-value=2.6e-17 Score=135.31 Aligned_cols=199 Identities=21% Similarity=0.266 Sum_probs=114.3
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCC-Cc-
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEP-SH- 78 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~-~~- 78 (221)
||.|+++... ++.+.+.+|+.++++.+.. .|++++||||||.+++.+|.+ ++++++++|+++|...... ..
T Consensus 123 ~G~S~~~~~~-~~~~~~a~~l~~~i~~~~~----~~~~lvG~S~Gg~ia~~~A~~--~p~~v~~lvLv~~~~~~~~~~~~ 195 (354)
T PLN02578 123 FGWSDKALIE-YDAMVWRDQVADFVKEVVK----EPAVLVGNSLGGFTALSTAVG--YPELVAGVALLNSAGQFGSESRE 195 (354)
T ss_pred CCCCCCcccc-cCHHHHHHHHHHHHHHhcc----CCeEEEEECHHHHHHHHHHHh--ChHhcceEEEECCCccccccccc
Confidence 7899886543 4788889999999998753 369999999999999998863 1348999999876422110 00
Q ss_pred ---------cHHHH--HHH---HHHhhcCCCcc---c------cc-cCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHH
Q 045548 79 ---------PIFVV--LAP---IVSFLLPRYQI---S------AA-NKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGY 134 (221)
Q Consensus 79 ---------~~~~~--~~~---~~~~~~~~~~~---~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (221)
..... ..+ ..........+ . .. ...........+.+.+....+....+. ....+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 273 (354)
T PLN02578 196 KEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNA--GEVYY 273 (354)
T ss_pred cccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCch--HHHHH
Confidence 00000 000 00000000000 0 00 000000000011111111111110000 01111
Q ss_pred HHHHH-H----H-HHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHH
Q 045548 135 EILRI-T----T-YLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDII 208 (221)
Q Consensus 135 ~~~~~-~----~-~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~ 208 (221)
.+... . . ...+.++++++|+|++||++|.++|.+.++++.+.++. .+++++ ++||+++.| .++++.+.|.
T Consensus 274 ~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~--a~l~~i-~~GH~~~~e-~p~~~~~~I~ 349 (354)
T PLN02578 274 RLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPD--TTLVNL-QAGHCPHDE-VPEQVNKALL 349 (354)
T ss_pred HHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CEEEEe-CCCCCcccc-CHHHHHHHHH
Confidence 11110 0 0 12345778999999999999999999999998888764 578888 589998776 6899999999
Q ss_pred HHHH
Q 045548 209 DWLC 212 (221)
Q Consensus 209 ~fl~ 212 (221)
+|++
T Consensus 350 ~fl~ 353 (354)
T PLN02578 350 EWLS 353 (354)
T ss_pred HHHh
Confidence 9986
No 27
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.77 E-value=5.6e-18 Score=134.71 Aligned_cols=195 Identities=17% Similarity=0.196 Sum_probs=109.9
Q ss_pred CCCCCCcc-cccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCC--
Q 045548 1 HGGSDGLH-AYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEP-- 76 (221)
Q Consensus 1 hG~S~~~~-g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~-- 76 (221)
||.|+... ....+. .+++|+.++++.+.. .+++++||||||.+++.++. +| ++++++|+++|......
T Consensus 71 ~G~S~~~~~~~~~~~-~~~~~l~~~l~~l~~----~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~ 142 (282)
T TIGR03343 71 FNKSDAVVMDEQRGL-VNARAVKGLMDALDI----EKAHLVGNSMGGATALNFALEYP---DRIGKLILMGPGGLGPSLF 142 (282)
T ss_pred CCCCCCCcCcccccc-hhHHHHHHHHHHcCC----CCeeEEEECchHHHHHHHHHhCh---HhhceEEEECCCCCCcccc
Confidence 78888642 111122 467888888887643 36999999999999999876 44 48999999987521110
Q ss_pred -CccHHHHHHHHHHhh-cCCCc-cccccCCC-C-CCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHH------H-HHHHH
Q 045548 77 -SHPIFVVLAPIVSFL-LPRYQ-ISAANKNG-M-PVSRDPEALVAKYTDPLVYTGSIRVRTGYEILR------I-TTYLQ 144 (221)
Q Consensus 77 -~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~ 144 (221)
..+. .....+.... .+... +....... . ....+.+............. .....+.. . .....
T Consensus 143 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 216 (282)
T TIGR03343 143 APMPM-EGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQP-----EHLKNFLISSQKAPLSTWDVT 216 (282)
T ss_pred ccCch-HHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCH-----HHHHHHHHhccccccccchHH
Confidence 0110 0000111000 00000 00000000 0 00001110000000000000 00000000 0 00123
Q ss_pred HhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 145 RNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 145 ~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
..++++++|+|+++|++|.++|++.++++.+.++ +.++++++++||+.+.| .++++.+.|.+||+
T Consensus 217 ~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~--~~~~~~i~~agH~~~~e-~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 217 ARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP--DAQLHVFSRCGHWAQWE-HADAFNRLVIDFLR 281 (282)
T ss_pred HHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC--CCEEEEeCCCCcCCccc-CHHHHHHHHHHHhh
Confidence 4577899999999999999999999999888876 47999999999998777 57889999999986
No 28
>PRK06489 hypothetical protein; Provisional
Probab=99.77 E-value=2.7e-17 Score=135.49 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=57.1
Q ss_pred HHhCCCCCCcEEEeecCCCcccChHHH--HHHHHHcCCCCceEEEcCCc----ccccCCCCChHHHHHHHHHHHHHh
Q 045548 144 QRNLNRLKVPFLLLHGTADTVTDPEAS--KKLHKYASSADKTMKLYQGF----LHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 144 ~~~~~~i~~P~Lii~G~~D~iv~~~~~--~~~~~~~~~~~~~~~~~~~~----~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
.+.+.+|++|+|+|+|++|.++|++.+ +++.+.++. .++++++++ ||..+ | +++++.+.|.+||++.
T Consensus 285 ~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~--a~l~~i~~a~~~~GH~~~-e-~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 285 SPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH--GRLVLIPASPETRGHGTT-G-SAKFWKAYLAEFLAQV 357 (360)
T ss_pred HHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC--CeEEEECCCCCCCCcccc-c-CHHHHHHHHHHHHHhc
Confidence 456778999999999999999999875 677777764 589999996 99885 5 7899999999999764
No 29
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.76 E-value=9.5e-18 Score=137.72 Aligned_cols=194 Identities=18% Similarity=0.183 Sum_probs=113.6
Q ss_pred CHHHHHH-HHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCccHHHHHH-----
Q 045548 13 SLDAAVK-DMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHPIFVVLA----- 85 (221)
Q Consensus 13 ~~~~~~~-dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~----- 85 (221)
++++++. |+.++++.+....+..+++++||||||.+++.++. +| ++++++|+++|...............
T Consensus 113 ~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~---~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~ 189 (350)
T TIGR01836 113 TLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYP---DKIKNLVTMVTPVDFETPGNMLSNWARHVDI 189 (350)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCc---hheeeEEEeccccccCCCCchhhhhccccCH
Confidence 6677764 58899999988877778999999999999998765 44 37999999988765432111100000
Q ss_pred ------------HHHH----hhcCCCccccccCCCCCCCCCHHHHHH------HhCCCCCcCCCcchhHHHHHHHHH---
Q 045548 86 ------------PIVS----FLLPRYQISAANKNGMPVSRDPEALVA------KYTDPLVYTGSIRVRTGYEILRIT--- 140 (221)
Q Consensus 86 ------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--- 140 (221)
.++. ...|................+++.+.. .+.+.... ......++++..
T Consensus 190 ~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~----~~~~~~~~~~~~~~~ 265 (350)
T TIGR01836 190 DLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQ----AGEAFRQFVKDFYQQ 265 (350)
T ss_pred HHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCc----cHHHHHHHHHHHHhc
Confidence 0000 000100000000000000122222111 11221111 111111221110
Q ss_pred H-HH---------HHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCC-CC-ChHHHHHHHH
Q 045548 141 T-YL---------QRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLF-EP-ERDDIVKDII 208 (221)
Q Consensus 141 ~-~~---------~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~-e~-~~~~v~~~i~ 208 (221)
+ .. ..++.++++|+|+++|++|.++|++.++.+++.+++.++++++++ ++|..+. ++ .++++++++.
T Consensus 266 n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~ 344 (350)
T TIGR01836 266 NGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIG 344 (350)
T ss_pred CcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHH
Confidence 0 00 113557899999999999999999999999999887778899998 5675544 44 3799999999
Q ss_pred HHHHHh
Q 045548 209 DWLCCR 214 (221)
Q Consensus 209 ~fl~~~ 214 (221)
+||.++
T Consensus 345 ~wl~~~ 350 (350)
T TIGR01836 345 KWLQAR 350 (350)
T ss_pred HHHHhC
Confidence 999763
No 30
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.76 E-value=3.4e-17 Score=138.02 Aligned_cols=202 Identities=15% Similarity=0.167 Sum_probs=113.8
Q ss_pred CCCCCCcccccCCHHHHHHHHH-HHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMK-LFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSH 78 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~-~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~ 78 (221)
||.|+.+....++++++++|+. .+++.+. ..+++++||||||.+++.++. +| ++++++||++|.....+..
T Consensus 243 ~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg----~~k~~LVGhSmGG~iAl~~A~~~P---e~V~~LVLi~~~~~~~~~~ 315 (481)
T PLN03087 243 FGRSPKPADSLYTLREHLEMIERSVLERYK----VKSFHIVAHSLGCILALALAVKHP---GAVKSLTLLAPPYYPVPKG 315 (481)
T ss_pred CCCCcCCCCCcCCHHHHHHHHHHHHHHHcC----CCCEEEEEECHHHHHHHHHHHhCh---HhccEEEEECCCccccccc
Confidence 7999876444568899999884 6777653 246999999999999999875 44 4899999998754432211
Q ss_pred cHHHHHHHHHHhhc-----CCCccccc-----c--CCCC--CCCCCHHHHH---HHhCCCCCcC----------CCcchh
Q 045548 79 PIFVVLAPIVSFLL-----PRYQISAA-----N--KNGM--PVSRDPEALV---AKYTDPLVYT----------GSIRVR 131 (221)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~~~~-----~--~~~~--~~~~~~~~~~---~~~~~~~~~~----------~~~~~~ 131 (221)
... ....+.... +...+... . .... ....++.... .......... ......
T Consensus 316 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 393 (481)
T PLN03087 316 VQA--TQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWH 393 (481)
T ss_pred hhH--HHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHH
Confidence 100 000000000 00000000 0 0000 0000110000 0000000000 000000
Q ss_pred HHHHHHH-----HHHHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHH
Q 045548 132 TGYEILR-----ITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKD 206 (221)
Q Consensus 132 ~~~~~~~-----~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~ 206 (221)
....+.. ....+.....++++|+|++||++|.++|++.++.+.+.++. .++++++++||..+.-..++++++.
T Consensus 394 ~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~--a~l~vI~~aGH~~~v~e~p~~fa~~ 471 (481)
T PLN03087 394 TLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPR--ARVKVIDDKDHITIVVGRQKEFARE 471 (481)
T ss_pred HHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC--CEEEEeCCCCCcchhhcCHHHHHHH
Confidence 0000000 00111222346899999999999999999999999888864 6999999999987763356889999
Q ss_pred HHHHHHH
Q 045548 207 IIDWLCC 213 (221)
Q Consensus 207 i~~fl~~ 213 (221)
|.+|...
T Consensus 472 L~~F~~~ 478 (481)
T PLN03087 472 LEEIWRR 478 (481)
T ss_pred HHHHhhc
Confidence 9998754
No 31
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.76 E-value=2.7e-17 Score=129.19 Aligned_cols=193 Identities=20% Similarity=0.223 Sum_probs=107.0
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCC--Cc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEP--SH 78 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~--~~ 78 (221)
||.|++... .+++++++++.++ . ..+++++||||||.+++.+|.. ++++++++|+++|...... ..
T Consensus 50 ~G~S~~~~~--~~~~~~~~~l~~~----~----~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lili~~~~~~~~~~~~ 117 (256)
T PRK10349 50 FGRSRGFGA--LSLADMAEAVLQQ----A----PDKAIWLGWSLGGLVASQIALT--HPERVQALVTVASSPCFSARDEW 117 (256)
T ss_pred CCCCCCCCC--CCHHHHHHHHHhc----C----CCCeEEEEECHHHHHHHHHHHh--ChHhhheEEEecCccceecCCCC
Confidence 788886542 4677766665532 1 2368999999999999999863 2358999999876422111 00
Q ss_pred c--HHHHHHHHHHhhcCCCc-----cccccCCCCCCCCCHH--HHHHH-hCCCCCcCCCcchhHHHHHHHHHHHHHHhCC
Q 045548 79 P--IFVVLAPIVSFLLPRYQ-----ISAANKNGMPVSRDPE--ALVAK-YTDPLVYTGSIRVRTGYEILRITTYLQRNLN 148 (221)
Q Consensus 79 ~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (221)
+ .......+......... +....... ......+ .+... ...+.. .........+... ...+.+.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~l~ 193 (256)
T PRK10349 118 PGIKPDVLAGFQQQLSDDFQRTVERFLALQTMG-TETARQDARALKKTVLALPMP--EVDVLNGGLEILK-TVDLRQPLQ 193 (256)
T ss_pred CcccHHHHHHHHHHHHhchHHHHHHHHHHHHcc-CchHHHHHHHHHHHhhccCCC--cHHHHHHHHHHHH-hCccHHHHh
Confidence 1 00001111000000000 00000000 0000000 00110 011110 0000011111111 012345678
Q ss_pred CCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 149 RLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 149 ~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
++++|+|+++|++|.++|.+.++.+.+.++ +.++++++++||.++.| .++++.+.+.+|-+
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i~--~~~~~~i~~~gH~~~~e-~p~~f~~~l~~~~~ 254 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLWP--HSESYIFAKAAHAPFIS-HPAEFCHLLVALKQ 254 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhCC--CCeEEEeCCCCCCcccc-CHHHHHHHHHHHhc
Confidence 899999999999999999999888777776 46999999999998887 67889999988854
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.75 E-value=2.6e-17 Score=130.18 Aligned_cols=195 Identities=22% Similarity=0.284 Sum_probs=109.0
Q ss_pred CCCCCCcccc--cCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCC
Q 045548 1 HGGSDGLHAY--VHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPS 77 (221)
Q Consensus 1 hG~S~~~~g~--~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~ 77 (221)
||.|+.+... ..+++.+++|+.++++++.. .+++++||||||.+++.++. +| ++++++|++++......
T Consensus 64 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~liG~S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~- 135 (288)
T TIGR01250 64 CGYSDQPDDSDELWTIDYFVDELEEVREKLGL----DKFYLLGHSWGGMLAQEYALKYG---QHLKGLIISSMLDSAPE- 135 (288)
T ss_pred CCCCCCCCcccccccHHHHHHHHHHHHHHcCC----CcEEEEEeehHHHHHHHHHHhCc---cccceeeEecccccchH-
Confidence 6888765322 25789999999998887643 25999999999999999875 44 47999999987543211
Q ss_pred ccHHHHHHHHHHhhcCCCcc---ccccCCCCCCCCCHH---HHHHHhCCCCCcCCCcc----------hhHHHHHH----
Q 045548 78 HPIFVVLAPIVSFLLPRYQI---SAANKNGMPVSRDPE---ALVAKYTDPLVYTGSIR----------VRTGYEIL---- 137 (221)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------~~~~~~~~---- 137 (221)
........... .+.... ....... . ..+.. .+...+..........+ ....+...
T Consensus 136 --~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (288)
T TIGR01250 136 --YVKELNRLRKE-LPPEVRAAIKRCEASG-D-YDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPN 210 (288)
T ss_pred --HHHHHHHHHhh-cChhHHHHHHHHHhcc-C-cchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCc
Confidence 00000000000 000000 0000000 0 00000 00000000000000000 00000000
Q ss_pred ------HHH-HHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHH
Q 045548 138 ------RIT-TYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDW 210 (221)
Q Consensus 138 ------~~~-~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~f 210 (221)
... ....+.+.++++|+|+++|++|.+ +++..+++.+.++ +.+++++++++|..+.| .++++.+.|.+|
T Consensus 211 ~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e-~p~~~~~~i~~f 286 (288)
T TIGR01250 211 EFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIA--GSRLVVFPDGSHMTMIE-DPEVYFKLLSDF 286 (288)
T ss_pred cccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhcc--CCeEEEeCCCCCCcccC-CHHHHHHHHHHH
Confidence 000 012345678999999999999985 6677888777665 35899999999999887 689999999999
Q ss_pred HH
Q 045548 211 LC 212 (221)
Q Consensus 211 l~ 212 (221)
|+
T Consensus 287 l~ 288 (288)
T TIGR01250 287 IR 288 (288)
T ss_pred hC
Confidence 84
No 33
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.74 E-value=1.8e-16 Score=130.27 Aligned_cols=68 Identities=28% Similarity=0.411 Sum_probs=56.6
Q ss_pred HHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceE---EEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 144 QRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTM---KLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 144 ~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~---~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
.+.+++|++|+|+|+|++|.++|++.++.+.+.++.....+ .+++++||..+.| +++++.+.|.+||+
T Consensus 281 ~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le-~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 281 TEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLV-ETDQVEELIRGFLR 351 (351)
T ss_pred HHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhc-CHHHHHHHHHHHhC
Confidence 35677899999999999999999999999999887542221 2568999999887 67999999999984
No 34
>PRK07581 hypothetical protein; Validated
Probab=99.74 E-value=7.2e-17 Score=131.94 Aligned_cols=70 Identities=11% Similarity=0.044 Sum_probs=60.2
Q ss_pred HHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCC-cccccCCCCChHHHHHHHHHHHHHhhc
Q 045548 144 QRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQG-FLHDLLFEPERDDIVKDIIDWLCCRVH 216 (221)
Q Consensus 144 ~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~H~i~~e~~~~~v~~~i~~fl~~~~~ 216 (221)
.+.+++|++|||+|+|++|.++|++.++.+.+.++. .+++++++ +||..+.| +.+++...|.+||.+.+.
T Consensus 268 ~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~--a~l~~i~~~~GH~~~~~-~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 268 AAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN--AELRPIESIWGHLAGFG-QNPADIAFIDAALKELLA 338 (339)
T ss_pred HHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CeEEEeCCCCCcccccc-CcHHHHHHHHHHHHHHHh
Confidence 456778999999999999999999999998888764 68999999 99988777 568888999999988654
No 35
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.74 E-value=1.6e-18 Score=132.07 Aligned_cols=184 Identities=23% Similarity=0.316 Sum_probs=110.6
Q ss_pred CCCCCCccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCc
Q 045548 1 HGGSDGLHA-YVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSH 78 (221)
Q Consensus 1 hG~S~~~~g-~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~ 78 (221)
||.|+.... ...++++.++|+.++++++.. .+++++||||||.+++.++. +|+ +++++|+++|........
T Consensus 35 ~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~ 107 (228)
T PF12697_consen 35 HGRSDPPPDYSPYSIEDYAEDLAELLDALGI----KKVILVGHSMGGMIALRLAARYPD---RVKGLVLLSPPPPLPDSP 107 (228)
T ss_dssp STTSSSHSSGSGGSHHHHHHHHHHHHHHTTT----SSEEEEEETHHHHHHHHHHHHSGG---GEEEEEEESESSSHHHHH
T ss_pred ccccccccccCCcchhhhhhhhhhccccccc----cccccccccccccccccccccccc---ccccceeecccccccccc
Confidence 688887543 346889999999999998765 37999999999999999875 553 899999999875421100
Q ss_pred --cHH-HHHHHHHHhhcCC-CccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHH---HHHHHHHhCCCCC
Q 045548 79 --PIF-VVLAPIVSFLLPR-YQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILR---ITTYLQRNLNRLK 151 (221)
Q Consensus 79 --~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~ 151 (221)
... .....+....... ..+... ........+........ ......+..+ ........+++++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (228)
T PF12697_consen 108 SRSFGPSFIRRLLAWRSRSLRRLASR---FFYRWFDGDEPEDLIRS--------SRRALAEYLRSNLWQADLSEALPRIK 176 (228)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHTHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHGSS
T ss_pred cccccchhhhhhhhcccccccccccc---ccccccccccccccccc--------cccccccccccccccccccccccccC
Confidence 000 0011111000000 000000 00000000100000000 0011111111 1223345677889
Q ss_pred CcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHH
Q 045548 152 VPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVK 205 (221)
Q Consensus 152 ~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~ 205 (221)
+|+++++|++|.+++.+..+.+.+.++ +++++++++++|+++.| +++++++
T Consensus 177 ~pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~-~p~~~~~ 227 (228)
T PF12697_consen 177 VPVLVIHGEDDPIVPPESAEELADKLP--NAELVVIPGAGHFLFLE-QPDEVAE 227 (228)
T ss_dssp SEEEEEEETTSSSSHHHHHHHHHHHST--TEEEEEETTSSSTHHHH-SHHHHHH
T ss_pred CCeEEeecCCCCCCCHHHHHHHHHHCC--CCEEEEECCCCCccHHH-CHHHHhc
Confidence 999999999999999999999888775 47999999999998886 5666554
No 36
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.73 E-value=4.1e-17 Score=126.91 Aligned_cols=190 Identities=14% Similarity=0.149 Sum_probs=105.6
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCcc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHP 79 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~ 79 (221)
||.|+.+.. .+++.+++|+.++++.+. ..+++++||||||.+++.++. ++. .++++++++++..+......
T Consensus 38 ~G~S~~~~~--~~~~~~~~~l~~~l~~~~----~~~~~lvG~S~Gg~va~~~a~~~~~--~~v~~lvl~~~~~~~~~~~~ 109 (242)
T PRK11126 38 HGGSAAISV--DGFADVSRLLSQTLQSYN----ILPYWLVGYSLGGRIAMYYACQGLA--GGLCGLIVEGGNPGLQNAEE 109 (242)
T ss_pred CCCCCCccc--cCHHHHHHHHHHHHHHcC----CCCeEEEEECHHHHHHHHHHHhCCc--ccccEEEEeCCCCCCCCHHH
Confidence 788887543 489999999999998763 247999999999999999875 332 25999999887644322110
Q ss_pred -HHHHH--HHHHHhhcCCC--cc-cccc-CC-CCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHH-----HHHHHHh
Q 045548 80 -IFVVL--APIVSFLLPRY--QI-SAAN-KN-GMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRI-----TTYLQRN 146 (221)
Q Consensus 80 -~~~~~--~~~~~~~~~~~--~~-~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 146 (221)
..... ..+.....+.. .+ .... .. ........ ............+ ......... .....+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 183 (242)
T PRK11126 110 RQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQ--RQQLVAKRSNNNG----AAVAAMLEATSLAKQPDLRPA 183 (242)
T ss_pred HHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccH--HHHHHHhcccCCH----HHHHHHHHhcCcccCCcHHHH
Confidence 00000 00000000000 00 0000 00 00001100 0000000000000 000001000 0123456
Q ss_pred CCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 147 LNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 147 ~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
+.++++|+|++||++|+++. .+.++. +.++++++++||..+.| .++++.+.|.+|+++
T Consensus 184 l~~i~~P~lii~G~~D~~~~-----~~~~~~---~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 184 LQALTFPFYYLCGERDSKFQ-----ALAQQL---ALPLHVIPNAGHNAHRE-NPAAFAASLAQILRL 241 (242)
T ss_pred hhccCCCeEEEEeCCcchHH-----HHHHHh---cCeEEEeCCCCCchhhh-ChHHHHHHHHHHHhh
Confidence 78899999999999998653 222332 46899999999988887 578999999999975
No 37
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.72 E-value=1.4e-16 Score=128.41 Aligned_cols=200 Identities=19% Similarity=0.211 Sum_probs=106.9
Q ss_pred CCCCCCccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCc
Q 045548 1 HGGSDGLHA-YVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSH 78 (221)
Q Consensus 1 hG~S~~~~g-~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~ 78 (221)
||.|+++.. +..+.+++++|+..+++++.. .+++++||||||.+++.++. +| ++++++|++++........
T Consensus 64 ~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~----~~~~lvG~S~GG~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~ 136 (306)
T TIGR01249 64 CGKSTPHACLEENTTWDLVADIEKLREKLGI----KNWLVFGGSWGSTLALAYAQTHP---EVVTGLVLRGIFLLREKEW 136 (306)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHcCC----CCEEEEEECHHHHHHHHHHHHCh---HhhhhheeeccccCCHHHH
Confidence 799987543 234678888999888887643 35999999999999999875 44 4799999998754321100
Q ss_pred cHH----------HHHHHHHHhhcCCC---ccccccCCCCCCCCCHH-------HHHHHhCCCCCcCCC--c----c--h
Q 045548 79 PIF----------VVLAPIVSFLLPRY---QISAANKNGMPVSRDPE-------ALVAKYTDPLVYTGS--I----R--V 130 (221)
Q Consensus 79 ~~~----------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~--~----~--~ 130 (221)
.+. ..+..++....... .+..... ........+ .......+....... . . .
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (306)
T TIGR01249 137 SWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNAYH-DRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKF 215 (306)
T ss_pred HHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHHHH-HHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHH
Confidence 000 00111111000000 0000000 000111111 000000011100000 0 0 0
Q ss_pred hHHH-HHH-------HH---HHHHHHhCCCC-CCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCC
Q 045548 131 RTGY-EIL-------RI---TTYLQRNLNRL-KVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEP 198 (221)
Q Consensus 131 ~~~~-~~~-------~~---~~~~~~~~~~i-~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~ 198 (221)
...+ .+. .. .......+.++ ++|+|++||++|.++|++.++++.+.++ ++++++++++||..+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~ 293 (306)
T TIGR01249 216 SLAFARLENHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP--EAELKVTNNAGHSAFDPN 293 (306)
T ss_pred HHHHHHHHHhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC--CCEEEEECCCCCCCCChH
Confidence 0000 100 00 01123456677 6999999999999999999999998876 468999999999876543
Q ss_pred ChHHHHHHHHHH
Q 045548 199 ERDDIVKDIIDW 210 (221)
Q Consensus 199 ~~~~v~~~i~~f 210 (221)
..+++.+.+.+|
T Consensus 294 ~~~~i~~~~~~~ 305 (306)
T TIGR01249 294 NLAALVHALETY 305 (306)
T ss_pred HHHHHHHHHHHh
Confidence 344444444443
No 38
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.71 E-value=1.4e-15 Score=125.81 Aligned_cols=69 Identities=13% Similarity=0.091 Sum_probs=59.5
Q ss_pred HHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCC--CCceEEEcCC-cccccCCCCChHHHHHHHHHHHHH
Q 045548 144 QRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASS--ADKTMKLYQG-FLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 144 ~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~--~~~~~~~~~~-~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
.+.+.++++|+|+|+|++|.++|++.++++.+.++. .+.+++++++ .||+.+.| +++++.+.|.+||++
T Consensus 316 ~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le-~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 316 EEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVF-DIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhc-CHHHHHHHHHHHHcc
Confidence 456778999999999999999999999998888863 2578899986 99998887 678999999999975
No 39
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.71 E-value=1e-15 Score=127.71 Aligned_cols=70 Identities=11% Similarity=0.042 Sum_probs=56.0
Q ss_pred HHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhhc
Q 045548 144 QRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRVH 216 (221)
Q Consensus 144 ~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~~ 216 (221)
...+.++++|+++|+|++|.+++ ...+++.+... ...++++++++||.++.| +++++++.+.+|++....
T Consensus 318 ~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E-~P~~f~~~l~~~~~~~~~ 387 (402)
T PLN02894 318 LESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMK-VPCEIIRVPQGGHFVFLD-NPSGFHSAVLYACRKYLS 387 (402)
T ss_pred hhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcC-CCCcEEEeCCCCCeeecc-CHHHHHHHHHHHHHHhcc
Confidence 45678899999999999998765 55556666653 246899999999998887 678899999999887663
No 40
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.71 E-value=4.4e-16 Score=125.93 Aligned_cols=202 Identities=22% Similarity=0.272 Sum_probs=111.8
Q ss_pred CC-CCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEE---EeCCcccCC
Q 045548 1 HG-GSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVV---LTSPAVGVE 75 (221)
Q Consensus 1 hG-~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~li---l~sp~~~~~ 75 (221)
|| .|..+++-.+++...++-+..+... +...|++++||||||.+|+.+|. +| +.++++| +++|.....
T Consensus 97 ~g~~s~~~~~~~y~~~~~v~~i~~~~~~----~~~~~~~lvghS~Gg~va~~~Aa~~P---~~V~~lv~~~~~~~~~~~~ 169 (326)
T KOG1454|consen 97 HGYSSPLPRGPLYTLRELVELIRRFVKE----VFVEPVSLVGHSLGGIVALKAAAYYP---ETVDSLVLLDLLGPPVYST 169 (326)
T ss_pred CCcCCCCCCCCceehhHHHHHHHHHHHh----hcCcceEEEEeCcHHHHHHHHHHhCc---ccccceeeecccccccccC
Confidence 56 4555677666655555555555544 44567999999999999998875 45 4799999 666654432
Q ss_pred CCcc-HHHH-HHHHH---HhhcCCCcccc-c-cC----CCCC-C----CCCHHHHHHHhCCC----CCcCCCcchhHHHH
Q 045548 76 PSHP-IFVV-LAPIV---SFLLPRYQISA-A-NK----NGMP-V----SRDPEALVAKYTDP----LVYTGSIRVRTGYE 135 (221)
Q Consensus 76 ~~~~-~~~~-~~~~~---~~~~~~~~~~~-~-~~----~~~~-~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 135 (221)
+... .... ...+. ....|...... . .. ..+. . ..+.+........+ ....+..... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 247 (326)
T KOG1454|consen 170 PKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLF--LE 247 (326)
T ss_pred CcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEE--Ee
Confidence 2211 1100 11010 00011000000 0 00 0000 0 00111111100000 0000000000 00
Q ss_pred HHHHHHHHHHhCCCCC-CcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 136 ILRITTYLQRNLNRLK-VPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 136 ~~~~~~~~~~~~~~i~-~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
+..-.......+.++. +|+|++||++|+++|.+.++.+.++++ +.+++.++++||..+.| .++++++.|..|+...
T Consensus 248 ~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p--n~~~~~I~~~gH~~h~e-~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 248 LLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLP--NAELVEIPGAGHLPHLE-RPEEVAALLRSFIARL 324 (326)
T ss_pred ccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCC--CceEEEeCCCCcccccC-CHHHHHHHHHHHHHHh
Confidence 0000012334566776 999999999999999999999998884 57999999999988775 6799999999999864
No 41
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.70 E-value=4.2e-16 Score=123.06 Aligned_cols=204 Identities=18% Similarity=0.186 Sum_probs=109.5
Q ss_pred CCCCCCcccccCC---HHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCC-
Q 045548 1 HGGSDGLHAYVHS---LDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVE- 75 (221)
Q Consensus 1 hG~S~~~~g~~~~---~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~- 75 (221)
+|+|+.++=..+. -.++++.+.+|-.....+ +.+|+||||||-++..+|+ +| ++|+.|||++|+.-..
T Consensus 127 ~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~----KmilvGHSfGGYLaa~YAlKyP---erV~kLiLvsP~Gf~~~ 199 (365)
T KOG4409|consen 127 FGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLE----KMILVGHSFGGYLAAKYALKYP---ERVEKLILVSPWGFPEK 199 (365)
T ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCc----ceeEeeccchHHHHHHHHHhCh---HhhceEEEecccccccC
Confidence 6899886433221 334555555555444332 5999999999999999986 55 5899999999973211
Q ss_pred C--------Ccc-HHHHHHHHHHhhcCCCccccccC--------------CCCCCCCCHHHHHHHhC--CCCCcCCCcch
Q 045548 76 P--------SHP-IFVVLAPIVSFLLPRYQISAANK--------------NGMPVSRDPEALVAKYT--DPLVYTGSIRV 130 (221)
Q Consensus 76 ~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 130 (221)
+ ..+ +.+.+......+.|...++.... ...+-....+.+.++.. .-....|....
T Consensus 200 ~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~f 279 (365)
T KOG4409|consen 200 PDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAF 279 (365)
T ss_pred CCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHH
Confidence 1 011 22111111111111000000000 00000001111122111 10000010000
Q ss_pred hHHHHH-HHHHHHHHHhCCCCC--CcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHH
Q 045548 131 RTGYEI-LRITTYLQRNLNRLK--VPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDI 207 (221)
Q Consensus 131 ~~~~~~-~~~~~~~~~~~~~i~--~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i 207 (221)
+..++. .-+...+.+++..++ +|+++|+|++| +++..+..+..+.+.....+++.++++||.++.| +++.+++.+
T Consensus 280 k~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~d-WmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylD-np~~Fn~~v 357 (365)
T KOG4409|consen 280 KNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRD-WMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLD-NPEFFNQIV 357 (365)
T ss_pred HHHHhccchhhhhHHHHHHhhccCCCEEEEecCcc-cccchhHHHHHHHhhcccceEEEecCCCceeecC-CHHHHHHHH
Confidence 000100 001112234455554 99999999998 5677777777776666678999999999999887 678888999
Q ss_pred HHHHHH
Q 045548 208 IDWLCC 213 (221)
Q Consensus 208 ~~fl~~ 213 (221)
+.++++
T Consensus 358 ~~~~~~ 363 (365)
T KOG4409|consen 358 LEECDK 363 (365)
T ss_pred HHHHhc
Confidence 988875
No 42
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.70 E-value=9.9e-16 Score=118.26 Aligned_cols=200 Identities=21% Similarity=0.239 Sum_probs=105.0
Q ss_pred CCCCCCccc-ccCCHHHHHHH-HHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCC
Q 045548 1 HGGSDGLHA-YVHSLDAAVKD-MKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPS 77 (221)
Q Consensus 1 hG~S~~~~g-~~~~~~~~~~d-l~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~ 77 (221)
||.|+.+.. ...++++.++| +..+++.+ +..+++++||||||.+++.++. +| +.++++|+++|.......
T Consensus 38 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~ia~~~a~~~~---~~v~~lil~~~~~~~~~~ 110 (251)
T TIGR03695 38 HGSSQSPDEIERYDFEEAAQDILATLLDQL----GIEPFFLVGYSMGGRIALYYALQYP---ERVQGLILESGSPGLATE 110 (251)
T ss_pred CCCCCCCCccChhhHHHHHHHHHHHHHHHc----CCCeEEEEEeccHHHHHHHHHHhCc---hheeeeEEecCCCCcCch
Confidence 688876432 34567777777 55555554 3457999999999999999875 44 379999999875443211
Q ss_pred ccHHH------HHHHHHHhh-cCCC-c-cccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHH--HHHHHHHh
Q 045548 78 HPIFV------VLAPIVSFL-LPRY-Q-ISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILR--ITTYLQRN 146 (221)
Q Consensus 78 ~~~~~------~~~~~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 146 (221)
..... .....+... ...+ . +............+.............. ............. ........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 189 (251)
T TIGR03695 111 EERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLAN-NPEGLAKMLRATGLGKQPSLWPK 189 (251)
T ss_pred HhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHHHHhcccc-cchHHHHHHHHhhhhcccchHHH
Confidence 00000 000000000 0000 0 0000000000000111000000000000 0000000000000 00112345
Q ss_pred CCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 147 LNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 147 ~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
+.++++|+|+++|++|..++ +..+.+.+..+ +.+++++++++|..+.| +++++.+.|.+||+
T Consensus 190 ~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~--~~~~~~~~~~gH~~~~e-~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 190 LQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP--NLTLVIIANAGHNIHLE-NPEAFAKILLAFLE 251 (251)
T ss_pred hhCCCCceEEEeeCcchHHH-HHHHHHHhcCC--CCcEEEEcCCCCCcCcc-ChHHHHHHHHHHhC
Confidence 67899999999999998774 45566555544 57899999999998887 46889999999983
No 43
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.70 E-value=3.5e-15 Score=123.72 Aligned_cols=70 Identities=19% Similarity=0.205 Sum_probs=59.3
Q ss_pred HHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCC--ceEEEcC-CcccccCCCCChHHHHHHHHHHHHHh
Q 045548 144 QRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSAD--KTMKLYQ-GFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 144 ~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~--~~~~~~~-~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
.+.+.+|++|+|+|+|++|.++|++.++.+.+.++... .++++++ ++||..+.| +++++.+.|.+||.+.
T Consensus 302 ~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le-~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 302 AAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLL-DDPRYGRLVRAFLERA 374 (379)
T ss_pred HHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhc-CHHHHHHHHHHHHHhh
Confidence 45678999999999999999999999999999887532 2666665 999998887 5688999999999875
No 44
>PLN02511 hydrolase
Probab=99.68 E-value=6.6e-16 Score=128.30 Aligned_cols=204 Identities=11% Similarity=0.109 Sum_probs=109.9
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCC---
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEP--- 76 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~--- 76 (221)
||.|+......+ ....++|+.++++++..++++.|++++||||||.+++.++. +++ ...+.+++++++......
T Consensus 140 ~G~s~~~~~~~~-~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~-~~~v~~~v~is~p~~l~~~~~ 217 (388)
T PLN02511 140 CADSPVTTPQFY-SASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGE-NCPLSGAVSLCNPFDLVIADE 217 (388)
T ss_pred CCCCCCCCcCEE-cCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCC-CCCceEEEEECCCcCHHHHHH
Confidence 677775322111 24668899999999999988889999999999999999864 443 123788877665433210
Q ss_pred --CccHHHHHHHHH----HhhcCCC--cccccc-CCC---CCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHH
Q 045548 77 --SHPIFVVLAPIV----SFLLPRY--QISAAN-KNG---MPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQ 144 (221)
Q Consensus 77 --~~~~~~~~~~~~----~~~~~~~--~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (221)
...+...+...+ ....... .+.... ... ................+.. + +. ...+... .....
T Consensus 218 ~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~--g-f~--~~~~yy~-~~s~~ 291 (388)
T PLN02511 218 DFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSF--G-FK--SVDAYYS-NSSSS 291 (388)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcC--C-CC--CHHHHHH-HcCch
Confidence 000000000100 0000000 000000 000 0000111111111111110 0 00 0011100 00123
Q ss_pred HhCCCCCCcEEEeecCCCcccChHHH-HHHHHHcCCCCceEEEcCCcccccCCCCChHH------HHHHHHHHHHHhh
Q 045548 145 RNLNRLKVPFLLLHGTADTVTDPEAS-KKLHKYASSADKTMKLYQGFLHDLLFEPERDD------IVKDIIDWLCCRV 215 (221)
Q Consensus 145 ~~~~~i~~P~Lii~G~~D~iv~~~~~-~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~------v~~~i~~fl~~~~ 215 (221)
..+++|++|+|+|+|++|+++|++.. ....+.. ++.++++++++||..+.|.. +. +.+.+.+||....
T Consensus 292 ~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~~~~E~p-~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 292 DSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHLGWVAGP-EAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred hhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCcceeccccCC-CCCCCCccHHHHHHHHHHHHH
Confidence 46788999999999999999998765 3334443 35789999999999988742 22 4577888887653
No 45
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.66 E-value=2e-15 Score=124.64 Aligned_cols=184 Identities=20% Similarity=0.270 Sum_probs=106.6
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCc-
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSH- 78 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~- 78 (221)
||.|++... ..+++++++++..+++.+.. .+++++||||||.+++.++. +| ++++++|+++|........
T Consensus 168 ~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~~a~~~a~~~~---~~v~~lv~~~~~~~~~~~~~ 239 (371)
T PRK14875 168 HGASSKAVG-AGSLDELAAAVLAFLDALGI----ERAHLVGHSMGGAVALRLAARAP---QRVASLTLIAPAGLGPEING 239 (371)
T ss_pred CCCCCCCCC-CCCHHHHHHHHHHHHHhcCC----ccEEEEeechHHHHHHHHHHhCc---hheeEEEEECcCCcCcccch
Confidence 677765432 35788899999888876532 36999999999999998875 34 4799999998753221111
Q ss_pred cHHHH---------HHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHH-HHHHH-------HH
Q 045548 79 PIFVV---------LAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGY-EILRI-------TT 141 (221)
Q Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~ 141 (221)
.+... +.+++..... . ................. .... ...+ .+... ..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~ 304 (371)
T PRK14875 240 DYIDGFVAAESRRELKPVLELLFA-----D------PALVTRQMVEDLLKYKR--LDGV--DDALRALADALFAGGRQRV 304 (371)
T ss_pred hHHHHhhcccchhHHHHHHHHHhc-----C------hhhCCHHHHHHHHHHhc--cccH--HHHHHHHHHHhccCcccch
Confidence 01000 1111110000 0 00000010000000000 0000 0000 00000 01
Q ss_pred HHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 142 YLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 142 ~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
.....+.++++|+|+++|++|.++|++.++.+. ...++.+++++||..+.+ +++++.+.|.+|+++
T Consensus 305 ~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~-----~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 305 DLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP-----DGVAVHVLPGAGHMPQME-AAADVNRLLAEFLGK 370 (371)
T ss_pred hHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc-----CCCeEEEeCCCCCChhhh-CHHHHHHHHHHHhcc
Confidence 123456788999999999999999988765432 246899999999988777 578899999999864
No 46
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.64 E-value=6.2e-15 Score=115.94 Aligned_cols=202 Identities=19% Similarity=0.250 Sum_probs=115.4
Q ss_pred CCCCCCccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCc
Q 045548 1 HGGSDGLHA-YVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSH 78 (221)
Q Consensus 1 hG~S~~~~g-~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~ 78 (221)
+|.|+.+.. ..++++.++.|+..+++.+.. .+++++||++|+.+|..+++ +| ++++|+|.++-... .+..
T Consensus 82 yG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~----~k~~lvgHDwGaivaw~la~~~P---erv~~lv~~nv~~~-~p~~ 153 (322)
T KOG4178|consen 82 YGFSDAPPHISEYTIDELVGDIVALLDHLGL----KKAFLVGHDWGAIVAWRLALFYP---ERVDGLVTLNVPFP-NPKL 153 (322)
T ss_pred CCCCCCCCCcceeeHHHHHHHHHHHHHHhcc----ceeEEEeccchhHHHHHHHHhCh---hhcceEEEecCCCC-Cccc
Confidence 588998766 667899999999999999974 36999999999999999876 55 48999998874322 1110
Q ss_pred -cHHHHHHHHHH-hhcCCCc--------------------cccccCCCC---C--CCCC----HHHHHHHhCCCC---Cc
Q 045548 79 -PIFVVLAPIVS-FLLPRYQ--------------------ISAANKNGM---P--VSRD----PEALVAKYTDPL---VY 124 (221)
Q Consensus 79 -~~~~~~~~~~~-~~~~~~~--------------------~~~~~~~~~---~--~~~~----~~~~~~~~~~~~---~~ 124 (221)
+.-...+-+.. .+...++ +........ . ...+ .+.-...+...+ .+
T Consensus 154 ~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~ 233 (322)
T KOG4178|consen 154 KPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGF 233 (322)
T ss_pred chhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccc
Confidence 00000000000 0000000 000000000 0 0000 011011111111 11
Q ss_pred CCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChH-HHHHHHHHcCCCCceEEEcCCcccccCCCCChHHH
Q 045548 125 TGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPE-ASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDI 203 (221)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~-~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v 203 (221)
.|.+ ...+++-+..+-....+.++++|+++|+|+.|.+.+.. .++.+.+.++. ..+.++++|+||.+..| ++++|
T Consensus 234 ~gpl--Nyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~-l~~~vv~~~~gH~vqqe-~p~~v 309 (322)
T KOG4178|consen 234 TGPL--NYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR-LTERVVIEGIGHFVQQE-KPQEV 309 (322)
T ss_pred cccc--hhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhcc-ccceEEecCCccccccc-CHHHH
Confidence 1111 11111111111012245678999999999999999987 33444445554 24788999999988766 68999
Q ss_pred HHHHHHHHHHh
Q 045548 204 VKDIIDWLCCR 214 (221)
Q Consensus 204 ~~~i~~fl~~~ 214 (221)
.+.+++|+++.
T Consensus 310 ~~~i~~f~~~~ 320 (322)
T KOG4178|consen 310 NQAILGFINSF 320 (322)
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 47
>PRK10985 putative hydrolase; Provisional
Probab=99.64 E-value=5.5e-15 Score=120.13 Aligned_cols=188 Identities=17% Similarity=0.189 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCcccCCCC-----ccHHHHHHHHHHh
Q 045548 17 AVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPAVGVEPS-----HPIFVVLAPIVSF 90 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~~~~~~~-----~~~~~~~~~~~~~ 90 (221)
..+|+..+++.+.++++..|++++||||||.+++.++ .++. ...++++|+++|+...... ..+...+...+..
T Consensus 113 ~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~-~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~ 191 (324)
T PRK10985 113 ETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGD-DLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLN 191 (324)
T ss_pred chHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCC-CCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHH
Confidence 3689999999998877777999999999999877665 3332 1248888887765432210 0010011111100
Q ss_pred hcC-CCccccccCCCCCCCCCHHHH---------HHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecC
Q 045548 91 LLP-RYQISAANKNGMPVSRDPEAL---------VAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGT 160 (221)
Q Consensus 91 ~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~ 160 (221)
.+. ..........+ ....+.+.+ .+....++. + + ....+.... ....+.++++++|+|+|+|+
T Consensus 192 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~fd~~~~~~~~--g-~--~~~~~~y~~-~~~~~~l~~i~~P~lii~g~ 264 (324)
T PRK10985 192 LLKANAARKLAAYPG-TLPINLAQLKSVRRLREFDDLITARIH--G-F--ADAIDYYRQ-CSALPLLNQIRKPTLIIHAK 264 (324)
T ss_pred HHHHHHHHHHHhccc-cccCCHHHHhcCCcHHHHhhhheeccC--C-C--CCHHHHHHH-CChHHHHhCCCCCEEEEecC
Confidence 000 00000000000 001111111 111112210 1 0 011111111 11235678899999999999
Q ss_pred CCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCC---hHH-HHHHHHHHHHHh
Q 045548 161 ADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPE---RDD-IVKDIIDWLCCR 214 (221)
Q Consensus 161 ~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~---~~~-v~~~i~~fl~~~ 214 (221)
+|++++++....+.+..+ +.++.+++++||..+.|.. ... .-+.+.+|+...
T Consensus 265 ~D~~~~~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 265 DDPFMTHEVIPKPESLPP--NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCCCChhhChHHHHhCC--CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 999999988776654433 4688899999999888742 111 224566677543
No 48
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.61 E-value=3.1e-16 Score=120.43 Aligned_cols=195 Identities=21% Similarity=0.187 Sum_probs=106.5
Q ss_pred CCCCCC---cccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcc----
Q 045548 1 HGGSDG---LHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAV---- 72 (221)
Q Consensus 1 hG~S~~---~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~---- 72 (221)
+|.|++ ......+.+++++++..+++.+..+ +++++||||||.+++.++. +|+ +++++|+++++.
T Consensus 11 ~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~vG~S~Gg~~~~~~a~~~p~---~v~~lvl~~~~~~~~~ 83 (230)
T PF00561_consen 11 FGYSSPHWDPDFPDYTTDDLAADLEALREALGIK----KINLVGHSMGGMLALEYAAQYPE---RVKKLVLISPPPDLPD 83 (230)
T ss_dssp STTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS----SEEEEEETHHHHHHHHHHHHSGG---GEEEEEEESESSHHHH
T ss_pred CCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC----CeEEEEECCChHHHHHHHHHCch---hhcCcEEEeeeccchh
Confidence 577875 3334456788888888888877543 4999999999999999875 654 899999999851
Q ss_pred cC-CCCccH--HH-H----HHH-HHHhhcCCCccccccCCCC--CCCCCHHHH--HHHhCCCCCcCCCcchhHHHH-H--
Q 045548 73 GV-EPSHPI--FV-V----LAP-IVSFLLPRYQISAANKNGM--PVSRDPEAL--VAKYTDPLVYTGSIRVRTGYE-I-- 136 (221)
Q Consensus 73 ~~-~~~~~~--~~-~----~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~-- 136 (221)
.. .+..+. .. . ... ......+.+.......... ....+.... ......+... ......+. .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 160 (230)
T PF00561_consen 84 GLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAET---DAFDNMFWNALG 160 (230)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHH---HHHHHHHHHHHH
T ss_pred hhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHH---HHHhhhcccccc
Confidence 11 000000 00 0 000 0000000000000000000 000000000 0000000000 00000000 0
Q ss_pred HHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHH
Q 045548 137 LRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDII 208 (221)
Q Consensus 137 ~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~ 208 (221)
..........+.++++|+|+++|++|.++|++.+..+.+.+++ .++++++++||..+.+ +.+++.+.|.
T Consensus 161 ~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~GH~~~~~-~~~~~~~~i~ 229 (230)
T PF00561_consen 161 YFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN--SQLVLIEGSGHFAFLE-GPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT--EEEEEETTCCSTHHHH-SHHHHHHHHH
T ss_pred ccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC--CEEEECCCCChHHHhc-CHHhhhhhhc
Confidence 0011123456788999999999999999999999998888775 6899999999987665 5566665553
No 49
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.61 E-value=1.2e-14 Score=115.45 Aligned_cols=198 Identities=16% Similarity=0.120 Sum_probs=107.2
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccH
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPI 80 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~ 80 (221)
||.|........+++++++++.++++.+.. ..+++|+||||||++++.++.. ++++++++|++++..........
T Consensus 56 ~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~---~~~v~lvGhS~GG~v~~~~a~~--~p~~v~~lv~~~~~~~~~g~~~~ 130 (273)
T PLN02211 56 AGIDQSDADSVTTFDEYNKPLIDFLSSLPE---NEKVILVGHSAGGLSVTQAIHR--FPKKICLAVYVAATMLKLGFQTD 130 (273)
T ss_pred CCCCCCCcccCCCHHHHHHHHHHHHHhcCC---CCCEEEEEECchHHHHHHHHHh--ChhheeEEEEeccccCCCCCCHH
Confidence 677755433336889999999988887532 2479999999999999988752 23479999999764221110000
Q ss_pred HHHHH--HHHHhhcCC----CccccccCCCCCCCCCHHHHHHH-hCC-CCCcCCCcchhHHHHHHH------HHH-HHHH
Q 045548 81 FVVLA--PIVSFLLPR----YQISAANKNGMPVSRDPEALVAK-YTD-PLVYTGSIRVRTGYEILR------ITT-YLQR 145 (221)
Q Consensus 81 ~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~------~~~-~~~~ 145 (221)
..... +........ ....... ......-..+..... +.+ |.. .......... ..+ ....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 204 (273)
T PLN02211 131 EDMKDGVPDLSEFGDVYELGFGLGPDQ-PPTSAIIKKEFRRKILYQMSPQE-----DSTLAAMLLRPGPILALRSARFEE 204 (273)
T ss_pred HHHhccccchhhhccceeeeeccCCCC-CCceeeeCHHHHHHHHhcCCCHH-----HHHHHHHhcCCcCccccccccccc
Confidence 00000 000000000 0000000 000000011111111 111 000 0000000000 000 0111
Q ss_pred hCCCC-CCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 146 NLNRL-KVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 146 ~~~~i-~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
...++ ++|+++|+|++|.++|++..+.+.+.++. .+++.++ +||..+.+ .++++.+.|.+....
T Consensus 205 ~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~--~~~~~l~-~gH~p~ls-~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 205 ETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPP--SQVYELE-SDHSPFFS-TPFLLFGLLIKAAAS 269 (273)
T ss_pred cccccCccceEEEEeCCCCCCCHHHHHHHHHhCCc--cEEEEEC-CCCCcccc-CHHHHHHHHHHHHHH
Confidence 23355 79999999999999999999998888764 4788887 79998887 678888888877543
No 50
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.61 E-value=1.2e-14 Score=138.45 Aligned_cols=200 Identities=18% Similarity=0.200 Sum_probs=114.1
Q ss_pred CCCCCCcc-------cccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcc
Q 045548 1 HGGSDGLH-------AYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAV 72 (221)
Q Consensus 1 hG~S~~~~-------g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~ 72 (221)
||.|+... ....+++.+++|+.++++.+.. .+++|+||||||.+++.++. +| ++++++|++++..
T Consensus 1408 ~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~----~~v~LvGhSmGG~iAl~~A~~~P---~~V~~lVlis~~p 1480 (1655)
T PLN02980 1408 HGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITP----GKVTLVGYSMGARIALYMALRFS---DKIEGAVIISGSP 1480 (1655)
T ss_pred CCCCCCccccccccccccCCHHHHHHHHHHHHHHhCC----CCEEEEEECHHHHHHHHHHHhCh---HhhCEEEEECCCC
Confidence 78886532 1235788999999999887643 36999999999999999875 44 4899999987643
Q ss_pred cCCCCccH-HHH-----HHHHHH-----hhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHH--
Q 045548 73 GVEPSHPI-FVV-----LAPIVS-----FLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRI-- 139 (221)
Q Consensus 73 ~~~~~~~~-~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 139 (221)
+....... ... ....+. .+...+ +...... .....+. ........+. . .........+..
T Consensus 1481 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~~~~--~~~~~~~-~~~~~~~~~~-~--~~~~~~~~~l~~~~ 1553 (1655)
T PLN02980 1481 GLKDEVARKIRSAKDDSRARMLIDHGLEIFLENW-YSGELWK--SLRNHPH-FNKIVASRLL-H--KDVPSLAKLLSDLS 1553 (1655)
T ss_pred ccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHh-ccHHHhh--hhccCHH-HHHHHHHHHh-c--CCHHHHHHHHHHhh
Confidence 32211000 000 000000 000000 0000000 0000110 0000000000 0 000000111110
Q ss_pred ---HHHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCC----------CceEEEcCCcccccCCCCChHHHHHH
Q 045548 140 ---TTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSA----------DKTMKLYQGFLHDLLFEPERDDIVKD 206 (221)
Q Consensus 140 ---~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~----------~~~~~~~~~~~H~i~~e~~~~~v~~~ 206 (221)
.....+.++++++|+|+|+|++|.+++ +.++++.+.++.. ..++++++++||..+.| +++++++.
T Consensus 1554 ~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE-~Pe~f~~~ 1631 (1655)
T PLN02980 1554 IGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLE-NPLPVIRA 1631 (1655)
T ss_pred hcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHH-CHHHHHHH
Confidence 012345688999999999999999885 6667777776542 24899999999998887 57889999
Q ss_pred HHHHHHHhhc
Q 045548 207 IIDWLCCRVH 216 (221)
Q Consensus 207 i~~fl~~~~~ 216 (221)
|.+||.+...
T Consensus 1632 I~~FL~~~~~ 1641 (1655)
T PLN02980 1632 LRKFLTRLHN 1641 (1655)
T ss_pred HHHHHHhccc
Confidence 9999998753
No 51
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.59 E-value=3.3e-14 Score=108.77 Aligned_cols=163 Identities=20% Similarity=0.194 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHHhcC--CCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhh
Q 045548 15 DAAVKDMKLFVEKVLADN--PGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFL 91 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~--~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~ 91 (221)
...++|+.+.++.+..+. ...++.++|||+||.+++.++. +|+ .++++|..+|...........
T Consensus 42 ~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~---~f~a~v~~~g~~d~~~~~~~~---------- 108 (213)
T PF00326_consen 42 QADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPD---RFKAAVAGAGVSDLFSYYGTT---------- 108 (213)
T ss_dssp HHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCC---GSSEEEEESE-SSTTCSBHHT----------
T ss_pred ccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccce---eeeeeeccceecchhcccccc----------
Confidence 456889999999997764 1236999999999999998876 554 789999998875543211000
Q ss_pred cCCCccccccCCCCCCCCCHHH-HHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCC--CCCcEEEeecCCCcccChH
Q 045548 92 LPRYQISAANKNGMPVSRDPEA-LVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNR--LKVPFLLLHGTADTVTDPE 168 (221)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~P~Lii~G~~D~iv~~~ 168 (221)
..... ....+.++.. ....+.-.+ -...+.+ +++|+|++||++|.+||++
T Consensus 109 -----------------~~~~~~~~~~~~~~~~------~~~~~~~~s----~~~~~~~~~~~~P~li~hG~~D~~Vp~~ 161 (213)
T PF00326_consen 109 -----------------DIYTKAEYLEYGDPWD------NPEFYRELS----PISPADNVQIKPPVLIIHGENDPRVPPS 161 (213)
T ss_dssp -----------------CCHHHGHHHHHSSTTT------SHHHHHHHH----HGGGGGGCGGGSEEEEEEETTBSSSTTH
T ss_pred -----------------cccccccccccCccch------hhhhhhhhc----cccccccccCCCCEEEEccCCCCccCHH
Confidence 00000 0000111100 001111110 0123344 8999999999999999999
Q ss_pred HHHHHHHHcCC--CCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhhcC
Q 045548 169 ASKKLHKYASS--ADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRVHG 217 (221)
Q Consensus 169 ~~~~~~~~~~~--~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~~~ 217 (221)
.+.++++.+.. .+.++++||+++|.+.....+.+..+.+.+|+++.+.+
T Consensus 162 ~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 162 QSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 99999887643 34789999999996655555678899999999998743
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=99.59 E-value=2.5e-14 Score=124.66 Aligned_cols=64 Identities=14% Similarity=0.141 Sum_probs=52.9
Q ss_pred CCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 147 LNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 147 ~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
...+++|+|+|+|++|+++|++..+.+.+.++ ..++++++ +||..+.| +++++.+.|.+|+.+.
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~-~gH~~~~e-~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALYDDLSRWVP--RLWRREIK-AGHWLPMS-HPQVLAAAVAEFVDAV 292 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHhccccccCC--cceEEEcc-CCCcchhh-ChhHHHHHHHHHHHhc
Confidence 44589999999999999999999888776665 35777776 58998877 5788999999999863
No 53
>PLN02872 triacylglycerol lipase
Probab=99.59 E-value=5.5e-14 Score=116.50 Aligned_cols=200 Identities=15% Similarity=0.209 Sum_probs=116.9
Q ss_pred CCHHHHH-HHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCC-CccHHHHHHH-HH
Q 045548 12 HSLDAAV-KDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEP-SHPIFVVLAP-IV 88 (221)
Q Consensus 12 ~~~~~~~-~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~-~~~~~~~~~~-~~ 88 (221)
.++++++ .|+.++++++..... .+++++||||||.+++.++.+|++.+.|+.+++++|...... ..++...+.. .+
T Consensus 137 ~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~ 215 (395)
T PLN02872 137 WSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAALTQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHL 215 (395)
T ss_pred CcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHhhChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhH
Confidence 3677777 899999999976433 589999999999999866656654457899999999755432 2233221111 01
Q ss_pred Hh---hcCCCccccccC--CCC--CCCC-------------------CHHHHHHHhCCCCCcCCCcchhHHHHHHHHH--
Q 045548 89 SF---LLPRYQISAANK--NGM--PVSR-------------------DPEALVAKYTDPLVYTGSIRVRTGYEILRIT-- 140 (221)
Q Consensus 89 ~~---~~~~~~~~~~~~--~~~--~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 140 (221)
.. .+....+..... ..+ .++. |...+...... .+++.+.+...-...+.
T Consensus 216 ~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~---~pagtS~k~~~H~~Q~~~s 292 (395)
T PLN02872 216 DQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEY---EPHPSSVKNLRHLFQMIRK 292 (395)
T ss_pred HHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhc---CCCcchHHHHHHHHHHHhc
Confidence 00 011111100000 000 0000 00000000000 01111111111000000
Q ss_pred ------------H---H---HHH--hCCCC--CCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccc--cCC
Q 045548 141 ------------T---Y---LQR--NLNRL--KVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHD--LLF 196 (221)
Q Consensus 141 ------------~---~---~~~--~~~~i--~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~--i~~ 196 (221)
+ | .-+ ++.++ ++|+++++|++|.+++++.++++.+.+++ ..+++.+++++|. ++.
T Consensus 293 ~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~-~~~l~~l~~~gH~dfi~~ 371 (395)
T PLN02872 293 GTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS-KPELLYLENYGHIDFLLS 371 (395)
T ss_pred CCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC-ccEEEEcCCCCCHHHHhC
Confidence 0 0 001 24566 58999999999999999999999999875 3588899999997 556
Q ss_pred CCChHHHHHHHHHHHHHhhc
Q 045548 197 EPERDDIVKDIIDWLCCRVH 216 (221)
Q Consensus 197 e~~~~~v~~~i~~fl~~~~~ 216 (221)
+.+++++++.|++||++...
T Consensus 372 ~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 372 TSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred cchHHHHHHHHHHHHHHhhh
Confidence 77899999999999997653
No 54
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.58 E-value=4.7e-14 Score=111.00 Aligned_cols=203 Identities=19% Similarity=0.255 Sum_probs=114.5
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhH-HHHHHHhc-CCCCCCCccEEEEe--CCcccCCC
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGA-AIVLKAVL-DPKFEANVAGVVLT--SPAVGVEP 76 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG-~ia~~~a~-~~~~~~~i~~lil~--sp~~~~~~ 76 (221)
||.|+-..++ +...+++|+..|++.........|++++|||||| .+++..++ .| ..+..+|+. +|. ....
T Consensus 91 HG~Sp~~~~h--~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p---~~~~rliv~D~sP~-~~~~ 164 (315)
T KOG2382|consen 91 HGSSPKITVH--NYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKP---DLIERLIVEDISPG-GVGR 164 (315)
T ss_pred CCCCcccccc--CHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcC---cccceeEEEecCCc-cCCc
Confidence 8999987776 5799999999999999765445689999999999 33433333 34 368888774 453 2111
Q ss_pred CccHHHHHHHHHHhhcCCCccc--cccCC----CCCCCCCHH--HHHHHhCCC--C--CcCCCcchhHHHHHHHHH--HH
Q 045548 77 SHPIFVVLAPIVSFLLPRYQIS--AANKN----GMPVSRDPE--ALVAKYTDP--L--VYTGSIRVRTGYEILRIT--TY 142 (221)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~--~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~--~~ 142 (221)
.......+...+... ..... ...+. ......+.- .....+..+ . .+...+.+....+++.-. ..
T Consensus 165 ~~~e~~e~i~~m~~~--d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s 242 (315)
T KOG2382|consen 165 SYGEYRELIKAMIQL--DLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILS 242 (315)
T ss_pred ccchHHHHHHHHHhc--cccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhc
Confidence 111111111111110 00000 00000 000001100 011111110 0 011111111122221110 00
Q ss_pred HHHhC--CCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 143 LQRNL--NRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 143 ~~~~~--~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
....+ .....|||+++|.++..+|.+.-.++.+..+. .+++.++++||.++.| .+++++..|.+|++..
T Consensus 243 ~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~--~e~~~ld~aGHwVh~E-~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 243 YWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN--VEVHELDEAGHWVHLE-KPEEFIESISEFLEEP 313 (315)
T ss_pred ccccccccccccceeEEecCCCCCcChhHHHHHHHhccc--hheeecccCCceeecC-CHHHHHHHHHHHhccc
Confidence 11222 45689999999999999999988877666664 7999999999999988 5799999999998764
No 55
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.57 E-value=1.3e-13 Score=115.33 Aligned_cols=62 Identities=21% Similarity=0.230 Sum_probs=51.9
Q ss_pred CCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhh
Q 045548 148 NRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 148 ~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
.++++|+|+|||++|+++|++.++.+.+..+ +.+++.++++.| . ..++++++.+.+||.+.+
T Consensus 352 ~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~--~~~l~~i~~~~~---~-e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 352 RRCPTPMLSGYWKNDPFSPEEDSRLIASSSA--DGKLLEIPFKPV---Y-RNFDKALQEISDWLEDRL 413 (414)
T ss_pred cCCCCcEEEEecCCCCCCCHHHHHHHHHhCC--CCeEEEccCCCc---c-CCHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999998776654 568999998722 2 268999999999998764
No 56
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=2.7e-14 Score=108.73 Aligned_cols=153 Identities=20% Similarity=0.246 Sum_probs=108.5
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcC-CCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCcc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADN-PGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHP 79 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~-~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~ 79 (221)
.|.|+|.. +-....+|+.++.+.++.++ +..+++|+|||||...++.+|..- +++++||.||.....+
T Consensus 99 yG~S~G~p----sE~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~----~~~alVL~SPf~S~~r--- 167 (258)
T KOG1552|consen 99 YGRSSGKP----SERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRY----PLAAVVLHSPFTSGMR--- 167 (258)
T ss_pred ccccCCCc----ccccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcC----CcceEEEeccchhhhh---
Confidence 37777753 22366889999999999998 578999999999999998887531 3899999999644211
Q ss_pred HHHHHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeec
Q 045548 80 IFVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHG 159 (221)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G 159 (221)
.+ .+.. ..+ . ..|. +. .....+.|++|+|++||
T Consensus 168 -------v~---~~~~-~~~-------~----------~~d~------------f~-------~i~kI~~i~~PVLiiHg 200 (258)
T KOG1552|consen 168 -------VA---FPDT-KTT-------Y----------CFDA------------FP-------NIEKISKITCPVLIIHG 200 (258)
T ss_pred -------hh---ccCc-ceE-------E----------eecc------------cc-------ccCcceeccCCEEEEec
Confidence 00 0100 000 0 0000 00 02457788999999999
Q ss_pred CCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCC-hHHHHHHHHHHHHHhh
Q 045548 160 TADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPE-RDDIVKDIIDWLCCRV 215 (221)
Q Consensus 160 ~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~-~~~v~~~i~~fl~~~~ 215 (221)
++|.+||......+++.++.+ .+-.+.+|++|.- .+ .+++...+..|+....
T Consensus 201 tdDevv~~sHg~~Lye~~k~~-~epl~v~g~gH~~---~~~~~~yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 201 TDDEVVDFSHGKALYERCKEK-VEPLWVKGAGHND---IELYPEYIEHLRRFISSVL 253 (258)
T ss_pred ccCceecccccHHHHHhcccc-CCCcEEecCCCcc---cccCHHHHHHHHHHHHHhc
Confidence 999999999999999998653 5778889999952 22 3577788888877654
No 57
>PRK10566 esterase; Provisional
Probab=99.55 E-value=3.8e-13 Score=105.19 Aligned_cols=63 Identities=24% Similarity=0.337 Sum_probs=52.0
Q ss_pred CCCC-CCcEEEeecCCCcccChHHHHHHHHHcCCC----CceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 147 LNRL-KVPFLLLHGTADTVTDPEASKKLHKYASSA----DKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 147 ~~~i-~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~----~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
+.++ ++|+|++||++|.++|++.++++.+.+... ..++++++|++|.+. ++.++++++||++.
T Consensus 181 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 181 LEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT-----PEALDAGVAFFRQH 248 (249)
T ss_pred hhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC-----HHHHHHHHHHHHhh
Confidence 4555 799999999999999999999998877543 257788999999752 45789999999875
No 58
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.52 E-value=9.4e-14 Score=127.83 Aligned_cols=68 Identities=18% Similarity=0.270 Sum_probs=57.8
Q ss_pred hCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceE-EEcCCcccccCC--CCChHHHHHHHHHHHHHhh
Q 045548 146 NLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTM-KLYQGFLHDLLF--EPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 146 ~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~-~~~~~~~H~i~~--e~~~~~v~~~i~~fl~~~~ 215 (221)
.+.+|++|+|++||++|+++|++.++.+.+.+++. ++ .+++++||+.+. ...+++++..|.+||.++-
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a--~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNA--EVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--eEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 46789999999999999999999999998888754 55 677999997665 3457899999999999864
No 59
>PRK11071 esterase YqiA; Provisional
Probab=99.46 E-value=3.1e-12 Score=96.12 Aligned_cols=55 Identities=20% Similarity=0.170 Sum_probs=46.3
Q ss_pred CCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 150 LKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 150 i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
..+|++++||++|++||++.+.++++.+ ++++++|+.|.. .+.+++++.+.+|+.
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~-----~~~~~~ggdH~f---~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC-----RQTVEEGGNHAF---VGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc-----ceEEECCCCcch---hhHHHhHHHHHHHhc
Confidence 6788899999999999999999988853 566789999975 234889999999975
No 60
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.43 E-value=2.7e-12 Score=97.28 Aligned_cols=179 Identities=16% Similarity=0.231 Sum_probs=96.7
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC--CCCCCCccEEEEeCC-cccCCCCccHHH-HHHH
Q 045548 11 VHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD--PKFEANVAGVVLTSP-AVGVEPSHPIFV-VLAP 86 (221)
Q Consensus 11 ~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~--~~~~~~i~~lil~sp-~~~~~~~~~~~~-~~~~ 86 (221)
+.+++.+++.++..+.. .+++.|+.++||||||++|.+.|.. .... ...++.+++. +-.......+.. .=..
T Consensus 53 ~~di~~Lad~la~el~~---~~~d~P~alfGHSmGa~lAfEvArrl~~~g~-~p~~lfisg~~aP~~~~~~~i~~~~D~~ 128 (244)
T COG3208 53 LTDIESLADELANELLP---PLLDAPFALFGHSMGAMLAFEVARRLERAGL-PPRALFISGCRAPHYDRGKQIHHLDDAD 128 (244)
T ss_pred cccHHHHHHHHHHHhcc---ccCCCCeeecccchhHHHHHHHHHHHHHcCC-CcceEEEecCCCCCCcccCCccCCCHHH
Confidence 45667777766665553 3457899999999999999988742 1111 3677766541 111110000000 0001
Q ss_pred HHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccC
Q 045548 87 IVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTD 166 (221)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~ 166 (221)
++..+. .+.... ..+-.|++-+.. + -..+++.+.+.+ .|....-..++||+.++-|++|+.|+
T Consensus 129 ~l~~l~---~lgG~p---~e~led~El~~l-~--------LPilRAD~~~~e--~Y~~~~~~pl~~pi~~~~G~~D~~vs 191 (244)
T COG3208 129 FLADLV---DLGGTP---PELLEDPELMAL-F--------LPILRADFRALE--SYRYPPPAPLACPIHAFGGEKDHEVS 191 (244)
T ss_pred HHHHHH---HhCCCC---hHHhcCHHHHHH-H--------HHHHHHHHHHhc--ccccCCCCCcCcceEEeccCcchhcc
Confidence 111000 000000 001122221110 0 012233333221 12112224689999999999999999
Q ss_pred hHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 167 PEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
.+....+.++ .+.+.++.+++| +|+..++ ..+++...|.+.+..
T Consensus 192 ~~~~~~W~~~-t~~~f~l~~fdG-gHFfl~~-~~~~v~~~i~~~l~~ 235 (244)
T COG3208 192 RDELGAWREH-TKGDFTLRVFDG-GHFFLNQ-QREEVLARLEQHLAH 235 (244)
T ss_pred HHHHHHHHHh-hcCCceEEEecC-cceehhh-hHHHHHHHHHHHhhh
Confidence 9998875555 455789999996 7976554 567788888777753
No 61
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.37 E-value=5.3e-12 Score=107.79 Aligned_cols=51 Identities=12% Similarity=0.076 Sum_probs=44.4
Q ss_pred HhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCC
Q 045548 145 RNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFE 197 (221)
Q Consensus 145 ~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e 197 (221)
..+.+|++|+|+++|++|.++|++.++.+.+.++. .+.++++++||..+.+
T Consensus 409 ~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~--~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 409 LDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGG--PKTFVLGESGHIAGVV 459 (532)
T ss_pred cchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCC--CEEEEECCCCCchHhh
Confidence 46778999999999999999999999998888763 5778899999988765
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.37 E-value=5.7e-12 Score=90.15 Aligned_cols=101 Identities=26% Similarity=0.414 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHhc-CCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcCCCcc
Q 045548 19 KDMKLFVEKVLAD-NPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPRYQI 97 (221)
Q Consensus 19 ~dl~~~~~~~~~~-~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (221)
+++.++++.+... ....+++++||||||.+++.++... .+++++|+++|. +
T Consensus 44 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~---~~v~~~v~~~~~----~--------------------- 95 (145)
T PF12695_consen 44 DAVERVLADIRAGYPDPDRIILIGHSMGGAIAANLAARN---PRVKAVVLLSPY----P--------------------- 95 (145)
T ss_dssp HHHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHHHHS---TTESEEEEESES----S---------------------
T ss_pred HHHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHhhhc---cceeEEEEecCc----c---------------------
Confidence 3556666654222 2345899999999999999887532 279999999882 0
Q ss_pred ccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHc
Q 045548 98 SAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYA 177 (221)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~ 177 (221)
. .+.+.+.++|+++++|++|.++|++..+++++++
T Consensus 96 -~--------------------------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~ 130 (145)
T PF12695_consen 96 -D--------------------------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEAL 130 (145)
T ss_dssp -G--------------------------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHH
T ss_pred -c--------------------------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHc
Confidence 0 0012234559999999999999999999999998
Q ss_pred CCCCceEEEcCCcccc
Q 045548 178 SSADKTMKLYQGFLHD 193 (221)
Q Consensus 178 ~~~~~~~~~~~~~~H~ 193 (221)
+ .++++..++|++|.
T Consensus 131 ~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 131 P-GPKELYIIPGAGHF 145 (145)
T ss_dssp C-SSEEEEEETTS-TT
T ss_pred C-CCcEEEEeCCCcCc
Confidence 8 56899999999994
No 63
>PRK11460 putative hydrolase; Provisional
Probab=99.36 E-value=3.1e-11 Score=93.60 Aligned_cols=60 Identities=22% Similarity=0.273 Sum_probs=47.8
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCC--CCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhh
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASS--ADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~--~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
++|+|++||++|++||++.++++.+.+.. .+.+++.|++++|.+. ++..+++.+||.+.+
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~-----~~~~~~~~~~l~~~l 209 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID-----PRLMQFALDRLRYTV 209 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC-----HHHHHHHHHHHHHHc
Confidence 68999999999999999999888877643 3467889999999862 456677777777654
No 64
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.35 E-value=3.1e-11 Score=92.59 Aligned_cols=130 Identities=25% Similarity=0.367 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhh
Q 045548 14 LDAAVKDMKLFVEKVLAD-NPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFL 91 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~-~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~ 91 (221)
++...+-+.++++..... .+..+++|.|.|.||.+++.++. +| ..+.|+|.+|+.+-..
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p---~~~~gvv~lsG~~~~~---------------- 143 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYP---EPLAGVVALSGYLPPE---------------- 143 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTS---STSSEEEEES---TTG----------------
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcC---cCcCEEEEeecccccc----------------
Confidence 444555566777665443 23447999999999999999986 44 3799999988642100
Q ss_pred cCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHH
Q 045548 92 LPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASK 171 (221)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~ 171 (221)
. ..... ..... ++|++++||++|+++|.+.++
T Consensus 144 -------~------~~~~~---------------------------------~~~~~--~~pi~~~hG~~D~vvp~~~~~ 175 (216)
T PF02230_consen 144 -------S------ELEDR---------------------------------PEALA--KTPILIIHGDEDPVVPFEWAE 175 (216)
T ss_dssp -------C------CCHCC---------------------------------HCCCC--TS-EEEEEETT-SSSTHHHHH
T ss_pred -------c------ccccc---------------------------------ccccC--CCcEEEEecCCCCcccHHHHH
Confidence 0 00000 01111 789999999999999998888
Q ss_pred HHHHHcCCC--CceEEEcCCcccccCCCCChHHHHHHHHHHHHHhh
Q 045548 172 KLHKYASSA--DKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 172 ~~~~~~~~~--~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
+..+.+... +.+++.|+|.+|.+ ..+.++++.+||.+.+
T Consensus 176 ~~~~~L~~~~~~v~~~~~~g~gH~i-----~~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 176 KTAEFLKAAGANVEFHEYPGGGHEI-----SPEELRDLREFLEKHI 216 (216)
T ss_dssp HHHHHHHCTT-GEEEEEETT-SSS-------HHHHHHHHHHHHHH-
T ss_pred HHHHHHHhcCCCEEEEEcCCCCCCC-----CHHHHHHHHHHHhhhC
Confidence 877766432 46889999999986 3567888999998763
No 65
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.35 E-value=2e-12 Score=95.84 Aligned_cols=165 Identities=18% Similarity=0.276 Sum_probs=108.7
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhc--CCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLAD--NPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSH 78 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~--~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~ 78 (221)
+|.|+|.. |-+-+.-|-...++.+-.+ ....+++|+|.|+||++|+.+|.+. ..++.++|+.+....+...
T Consensus 117 YG~S~Gsp----sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~--~~ri~~~ivENTF~SIp~~- 189 (300)
T KOG4391|consen 117 YGKSEGSP----SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKN--SDRISAIIVENTFLSIPHM- 189 (300)
T ss_pred cccCCCCc----cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccc--hhheeeeeeechhccchhh-
Confidence 58888842 3334455777777877643 2245799999999999998776432 3489999998875443210
Q ss_pred cHHHHHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEee
Q 045548 79 PIFVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLH 158 (221)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~ 158 (221)
..+ .++|.. . +. ++ .+.++- ... -...+..-++|.|++.
T Consensus 190 -----~i~---~v~p~~-------------~--k~--------------i~-~lc~kn--~~~-S~~ki~~~~~P~LFiS 228 (300)
T KOG4391|consen 190 -----AIP---LVFPFP-------------M--KY--------------IP-LLCYKN--KWL-SYRKIGQCRMPFLFIS 228 (300)
T ss_pred -----hhh---eeccch-------------h--hH--------------HH-HHHHHh--hhc-chhhhccccCceEEee
Confidence 000 000000 0 00 00 000000 000 0223456689999999
Q ss_pred cCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhh
Q 045548 159 GTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 159 G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
|.+|.+|||..-+.+++.+++..|++..||++-|.-++- -+-.++.|.+||.+..
T Consensus 229 GlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i--~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 229 GLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI--CDGYFQAIEDFLAEVV 283 (300)
T ss_pred cCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE--eccHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999965442 3558899999998764
No 66
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.34 E-value=1.3e-11 Score=91.49 Aligned_cols=181 Identities=17% Similarity=0.254 Sum_probs=105.7
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCc--
Q 045548 2 GGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSH-- 78 (221)
Q Consensus 2 G~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~-- 78 (221)
|.|+|.- +...+...++|+..+++++....--.| +++|||=||.+++.++. ++ -++-+|-++.-+......
T Consensus 74 GeS~gsf-~~Gn~~~eadDL~sV~q~~s~~nr~v~-vi~gHSkGg~Vvl~ya~K~~----d~~~viNcsGRydl~~~I~e 147 (269)
T KOG4667|consen 74 GESEGSF-YYGNYNTEADDLHSVIQYFSNSNRVVP-VILGHSKGGDVVLLYASKYH----DIRNVINCSGRYDLKNGINE 147 (269)
T ss_pred CCcCCcc-ccCcccchHHHHHHHHHHhccCceEEE-EEEeecCccHHHHHHHHhhc----CchheEEcccccchhcchhh
Confidence 7888864 335677888999999999976432334 48999999999998875 33 266677776543322110
Q ss_pred cHHHHHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCC--CCcEEE
Q 045548 79 PIFVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRL--KVPFLL 156 (221)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~Li 156 (221)
........++.. -.....++ .+.... + .++..... .++...+.+...+| +||+|-
T Consensus 148 Rlg~~~l~~ike-~Gfid~~~-rkG~y~-----------------~--rvt~eSlm--drLntd~h~aclkId~~C~VLT 204 (269)
T KOG4667|consen 148 RLGEDYLERIKE-QGFIDVGP-RKGKYG-----------------Y--RVTEESLM--DRLNTDIHEACLKIDKQCRVLT 204 (269)
T ss_pred hhcccHHHHHHh-CCceecCc-ccCCcC-----------------c--eecHHHHH--HHHhchhhhhhcCcCccCceEE
Confidence 000001111110 00000000 000000 0 00000111 11112233344445 799999
Q ss_pred eecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhh
Q 045548 157 LHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 157 i~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
+||..|.|||.+.+.+|++.+++ ++++++||+.|+... .-++.....+.|..-+.
T Consensus 205 vhGs~D~IVPve~AkefAk~i~n--H~L~iIEgADHnyt~--~q~~l~~lgl~f~k~r~ 259 (269)
T KOG4667|consen 205 VHGSEDEIVPVEDAKEFAKIIPN--HKLEIIEGADHNYTG--HQSQLVSLGLEFIKTRI 259 (269)
T ss_pred EeccCCceeechhHHHHHHhccC--CceEEecCCCcCccc--hhhhHhhhcceeEEeee
Confidence 99999999999999999999987 689999999998544 23455555555655443
No 67
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.30 E-value=2.3e-12 Score=94.57 Aligned_cols=182 Identities=17% Similarity=0.155 Sum_probs=105.4
Q ss_pred CCCCCCcccccCCHHHHHHHH---HHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCC
Q 045548 1 HGGSDGLHAYVHSLDAAVKDM---KLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPS 77 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl---~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~ 77 (221)
+|.|-++.-- ...+..-+|. ..+.++++. .|+.++|.|=||..++..|.. +++.|+++|+.+........
T Consensus 82 YG~SrPP~Rk-f~~~ff~~Da~~avdLM~aLk~----~~fsvlGWSdGgiTalivAak--~~e~v~rmiiwga~ayvn~~ 154 (277)
T KOG2984|consen 82 YGTSRPPERK-FEVQFFMKDAEYAVDLMEALKL----EPFSVLGWSDGGITALIVAAK--GKEKVNRMIIWGAAAYVNHL 154 (277)
T ss_pred CCCCCCCccc-chHHHHHHhHHHHHHHHHHhCC----CCeeEeeecCCCeEEEEeecc--Chhhhhhheeecccceecch
Confidence 4666554211 1344444444 444444433 379999999999999876542 23479999887765443321
Q ss_pred c-cHHHHHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHH---------HHHHHHhC
Q 045548 78 H-PIFVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRI---------TTYLQRNL 147 (221)
Q Consensus 78 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 147 (221)
- ..+. -.+-.+.|.++.+ +.+++.|. +. .++..+ .+.++. .++++-.+
T Consensus 155 ~~ma~k-giRdv~kWs~r~R---------------~P~e~~Yg-~e----~f~~~w-a~wvD~v~qf~~~~dG~fCr~~l 212 (277)
T KOG2984|consen 155 GAMAFK-GIRDVNKWSARGR---------------QPYEDHYG-PE----TFRTQW-AAWVDVVDQFHSFCDGRFCRLVL 212 (277)
T ss_pred hHHHHh-chHHHhhhhhhhc---------------chHHHhcC-HH----HHHHHH-HHHHHHHHHHhhcCCCchHhhhc
Confidence 0 0000 0011111111111 11111110 00 000001 011111 12345578
Q ss_pred CCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 148 NRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 148 ~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
++++||+||+||+.|++|+-..+..+.+..+ ..++.++|.++|++++. -.+++...+++||++.
T Consensus 213 p~vkcPtli~hG~kDp~~~~~hv~fi~~~~~--~a~~~~~peGkHn~hLr-ya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 213 PQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS--LAKVEIHPEGKHNFHLR-YAKEFNKLVLDFLKST 276 (277)
T ss_pred ccccCCeeEeeCCcCCCCCCCCccchhhhcc--cceEEEccCCCcceeee-chHHHHHHHHHHHhcc
Confidence 9999999999999999999888777666654 46899999999999886 4688999999999864
No 68
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.28 E-value=1.4e-10 Score=94.50 Aligned_cols=190 Identities=17% Similarity=0.228 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCcccC--CC--Ccc-HHHHHHHHHH--
Q 045548 18 VKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPAVGV--EP--SHP-IFVVLAPIVS-- 89 (221)
Q Consensus 18 ~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~~~~--~~--~~~-~~~~~~~~~~-- 89 (221)
.+|+.++++.+++++|+.|.+.+|.||||.+...+. +..+...-+.|+++++|+--. .. ..+ ....+-+.+.
T Consensus 181 t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~ 260 (409)
T KOG1838|consen 181 TEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLN 260 (409)
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHh
Confidence 579999999999999999999999999999999885 332222346777888897321 10 000 0111111111
Q ss_pred ---hhcCCCc-cc--cccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCc
Q 045548 90 ---FLLPRYQ-IS--AANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADT 163 (221)
Q Consensus 90 ---~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~ 163 (221)
...+... +. ........-++.-++..+.+..++. |. ....+..+- ......+.+|++|+|+|++.+|+
T Consensus 261 l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~--gf---~~~deYY~~-aSs~~~v~~I~VP~L~ina~DDP 334 (409)
T KOG1838|consen 261 LKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMF--GF---KSVDEYYKK-ASSSNYVDKIKVPLLCINAADDP 334 (409)
T ss_pred HHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhc--CC---CcHHHHHhh-cchhhhcccccccEEEEecCCCC
Confidence 1111110 00 0000000011222222222222211 10 011111111 11235678999999999999999
Q ss_pred ccChHHHHHHHHHc-CCCCceEEEcCCcccccCCCC---ChHHHHHH-HHHHHHHhh
Q 045548 164 VTDPEASKKLHKYA-SSADKTMKLYQGFLHDLLFEP---ERDDIVKD-IIDWLCCRV 215 (221)
Q Consensus 164 iv~~~~~~~~~~~~-~~~~~~~~~~~~~~H~i~~e~---~~~~v~~~-i~~fl~~~~ 215 (221)
++|.+..-. +.+ .+++.-+.+-..+||.-++|. .....++. +.+|+..-.
T Consensus 335 v~p~~~ip~--~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 335 VVPEEAIPI--DDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred CCCcccCCH--HHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 999975432 222 233445555577999988875 44445555 777777543
No 69
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.26 E-value=9.4e-11 Score=87.90 Aligned_cols=181 Identities=16% Similarity=0.202 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEE-EEeC-C-cccCCCC---c---cHHHHH
Q 045548 14 LDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGV-VLTS-P-AVGVEPS---H---PIFVVL 84 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~l-il~s-p-~~~~~~~---~---~~~~~~ 84 (221)
.|....|+...++++++..|+.|.+.+||||||.+.-.+.+++ +..+. |.-+ + +.+..+. . +.+...
T Consensus 84 ~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~~----k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv 159 (281)
T COG4757 84 LDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQHP----KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLV 159 (281)
T ss_pred hhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccccCc----ccceeeEeccccccccchhhhhcccceeecccc
Confidence 4567789999999999988899999999999999987666654 23333 2222 1 1111110 0 011111
Q ss_pred HHHHHhhcCCCccccccCC--CCCCCCCHHHHHHHhCCCC-CcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCC
Q 045548 85 APIVSFLLPRYQISAANKN--GMPVSRDPEALVAKYTDPL-VYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTA 161 (221)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~ 161 (221)
.+.+..+...+. +..... .++.+.-.+.. ..-..|- .+.. -.+...++.++++++|++.+...+
T Consensus 160 ~p~lt~w~g~~p-~~l~G~G~d~p~~v~RdW~-RwcR~p~y~fdd-----------p~~~~~~q~yaaVrtPi~~~~~~D 226 (281)
T COG4757 160 GPPLTFWKGYMP-KDLLGLGSDLPGTVMRDWA-RWCRHPRYYFDD-----------PAMRNYRQVYAAVRTPITFSRALD 226 (281)
T ss_pred ccchhhccccCc-HhhcCCCccCcchHHHHHH-HHhcCccccccC-----------hhHhHHHHHHHHhcCceeeeccCC
Confidence 222222211110 000000 11111111111 1011111 1110 011123567888999999999999
Q ss_pred CcccChHHHHHHHHHcCCCCceEEEcCC----cccccCCCCChHHHHHHHHHHH
Q 045548 162 DTVTDPEASKKLHKYASSADKTMKLYQG----FLHDLLFEPERDDIVKDIIDWL 211 (221)
Q Consensus 162 D~iv~~~~~~~~~~~~~~~~~~~~~~~~----~~H~i~~e~~~~~v~~~i~~fl 211 (221)
|+.+|+.+.+.|.+-+.+...+...++. .||+-.+....|.+++++++|+
T Consensus 227 D~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 227 DPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred CCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 9999999999998888877777777765 4898877644488999999986
No 70
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.24 E-value=1.9e-10 Score=94.96 Aligned_cols=68 Identities=18% Similarity=0.250 Sum_probs=57.7
Q ss_pred hCCCCC-CcEEEeecCCCcccChHHHHHHHHHc---CCCCceEEEcCCcccccCCC--CChHHHHHHHHHHHHH
Q 045548 146 NLNRLK-VPFLLLHGTADTVTDPEASKKLHKYA---SSADKTMKLYQGFLHDLLFE--PERDDIVKDIIDWLCC 213 (221)
Q Consensus 146 ~~~~i~-~P~Lii~G~~D~iv~~~~~~~~~~~~---~~~~~~~~~~~~~~H~i~~e--~~~~~v~~~i~~fl~~ 213 (221)
++++|+ +|+|.+-|++|.|+|+.+++.+.+.+ ++.+|+.++.+++||...+. .-+++++..|.+||.+
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 457898 99999999999999999998888864 77788889999999965553 3578999999999975
No 71
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.24 E-value=1.6e-10 Score=101.59 Aligned_cols=72 Identities=21% Similarity=0.379 Sum_probs=62.5
Q ss_pred hCCCCCCcEEEeecCCCcccChHHHHHHHHHcCC--CCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhhcC
Q 045548 146 NLNRLKVPFLLLHGTADTVTDPEASKKLHKYASS--ADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRVHG 217 (221)
Q Consensus 146 ~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~--~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~~~ 217 (221)
...++++|+|+|||++|.-||.+.+.++++.+.. ...++++||+.+|.+....++.+++..+++|+.+.+.+
T Consensus 546 ~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 546 YADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred hhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 4678999999999999999999999999888753 35788999999998877667888999999999987643
No 72
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.24 E-value=1.6e-10 Score=89.10 Aligned_cols=65 Identities=25% Similarity=0.424 Sum_probs=48.9
Q ss_pred HhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHH
Q 045548 145 RNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWL 211 (221)
Q Consensus 145 ~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl 211 (221)
.....+++|+++++|++|.+.|........+.++. ..+++++++++|..+.+. .+.+.+.+.+|+
T Consensus 215 ~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~-p~~~~~~i~~~~ 279 (282)
T COG0596 215 AALARITVPTLIIHGEDDPVVPAELARRLAAALPN-DARLVVIPGAGHFPHLEA-PEAFAAALLAFL 279 (282)
T ss_pred hhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-CceEEEeCCCCCcchhhc-HHHHHHHHHHHH
Confidence 34567789999999999977777665555555554 478999999999988873 456777777644
No 73
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.23 E-value=8e-11 Score=92.95 Aligned_cols=189 Identities=16% Similarity=0.221 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHH-hcCCCCCCCccE-EEEeCCcccCC-----CCccHH-HHHHHHHH
Q 045548 18 VKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKA-VLDPKFEANVAG-VVLTSPAVGVE-----PSHPIF-VVLAPIVS 89 (221)
Q Consensus 18 ~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~-a~~~~~~~~i~~-lil~sp~~~~~-----~~~~~~-~~~~~~~~ 89 (221)
.+|+..+++.++.+.+..|++.+|.||||.....+ ++.... ..+++ +++++|. .+. -...+. +.+.+.+.
T Consensus 131 t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d-~~~~aa~~vs~P~-Dl~~~~~~l~~~~s~~ly~r~l~ 208 (345)
T COG0429 131 TEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDD-LPLDAAVAVSAPF-DLEACAYRLDSGFSLRLYSRYLL 208 (345)
T ss_pred hhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccC-cccceeeeeeCHH-HHHHHHHHhcCchhhhhhHHHHH
Confidence 38999999999999999999999999999555544 443221 23444 4555664 110 011111 11111111
Q ss_pred hhcCCC-c--cccccCCCCCCCCCHHHHH-----HHhCCCCCcCCCcchhHHHHHHHHHHH--HHHhCCCCCCcEEEeec
Q 045548 90 FLLPRY-Q--ISAANKNGMPVSRDPEALV-----AKYTDPLVYTGSIRVRTGYEILRITTY--LQRNLNRLKVPFLLLHG 159 (221)
Q Consensus 90 ~~~~~~-~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~P~Lii~G 159 (221)
..+.+. . .... ....+... .+.+. ..+ |.+.. + +....-+..++.+. ....+++|++|+|||++
T Consensus 209 ~~L~~~~~~kl~~l-~~~~p~~~-~~~ik~~~ti~eF-D~~~T-a--p~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A 282 (345)
T COG0429 209 RNLKRNAARKLKEL-EPSLPGTV-LAAIKRCRTIREF-DDLLT-A--PLHGFADAEDYYRQASSLPLLPKIRKPTLIINA 282 (345)
T ss_pred HHHHHHHHHHHHhc-CcccCcHH-HHHHHhhchHHhc-cceee-e--cccCCCcHHHHHHhccccccccccccceEEEec
Confidence 100000 0 0000 00000000 11111 011 11111 0 11110111111111 12467899999999999
Q ss_pred CCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCC-C-hHH--HHHHHHHHHHHhh
Q 045548 160 TADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEP-E-RDD--IVKDIIDWLCCRV 215 (221)
Q Consensus 160 ~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~-~-~~~--v~~~i~~fl~~~~ 215 (221)
.+|++++++..-+.-.. .++...+..-+.+||..+... . ... ..+.+.+|++...
T Consensus 283 ~DDP~~~~~~iP~~~~~-~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 283 KDDPFMPPEVIPKLQEM-LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred CCCCCCChhhCCcchhc-CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 99999999876654332 345677888889999888862 2 222 3366888887653
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.22 E-value=9.1e-10 Score=87.90 Aligned_cols=134 Identities=20% Similarity=0.266 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcCCC
Q 045548 17 AVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPRY 95 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (221)
..+++..+++.........+++++||||||..++.++. +| +.+++++..+|...... .++. ...+...
T Consensus 125 ~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p---~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~---- 193 (283)
T PLN02442 125 VVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNP---DKYKSVSAFAPIANPIN-CPWG---QKAFTNY---- 193 (283)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCc---hhEEEEEEECCccCccc-Cchh---hHHHHHH----
Confidence 45666666666543323346899999999999998876 44 47999999988754221 1110 0001100
Q ss_pred ccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChH-HHHHHH
Q 045548 96 QISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPE-ASKKLH 174 (221)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~-~~~~~~ 174 (221)
+ ..+.+. ... .+|. . ....+...++|+|+++|++|.+++.. .++.++
T Consensus 194 -~----------g~~~~~-~~~-~d~~------------------~-~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~ 241 (283)
T PLN02442 194 -L----------GSDKAD-WEE-YDAT------------------E-LVSKFNDVSATILIDQGEADKFLKEQLLPENFE 241 (283)
T ss_pred -c----------CCChhh-HHH-cChh------------------h-hhhhccccCCCEEEEECCCCccccccccHHHHH
Confidence 0 001110 010 1111 0 11234567899999999999999973 244444
Q ss_pred H---HcCCCCceEEEcCCccccc
Q 045548 175 K---YASSADKTMKLYQGFLHDL 194 (221)
Q Consensus 175 ~---~~~~~~~~~~~~~~~~H~i 194 (221)
+ +.. ...++++++|.+|..
T Consensus 242 ~~l~~~g-~~~~~~~~pg~~H~~ 263 (283)
T PLN02442 242 EACKEAG-APVTLRLQPGYDHSY 263 (283)
T ss_pred HHHHHcC-CCeEEEEeCCCCccH
Confidence 4 333 347899999999975
No 75
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.20 E-value=4.4e-10 Score=86.26 Aligned_cols=132 Identities=17% Similarity=0.197 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHhcC--CCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhh
Q 045548 14 LDAAVKDMKLFVEKVLADN--PGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFL 91 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~--~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~ 91 (221)
.+...+|+...++.++.+. ...++.++|+|+||.+++.++... ..++++|..-|. .
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~---~~~~a~v~~yg~-----~-------------- 132 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD---PRVDAAVSFYGG-----S-------------- 132 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT---TTSSEEEEES-S-----S--------------
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc---cccceEEEEcCC-----C--------------
Confidence 3566788888888887654 235799999999999999988642 257776654330 0
Q ss_pred cCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHH
Q 045548 92 LPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASK 171 (221)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~ 171 (221)
. . .. ......++++|+|+++|++|+++|.+..+
T Consensus 133 ---~-~-----------~~--------------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~ 165 (218)
T PF01738_consen 133 ---P-P-----------PP--------------------------------PLEDAPKIKAPVLILFGENDPFFPPEEVE 165 (218)
T ss_dssp ---S-G-----------GG--------------------------------HHHHGGG--S-EEEEEETT-TTS-HHHHH
T ss_pred ---C-C-----------Cc--------------------------------chhhhcccCCCEeecCccCCCCCChHHHH
Confidence 0 0 00 01234568999999999999999999877
Q ss_pred HHHHHc--CCCCceEEEcCCcccccCCCC-------ChHHHHHHHHHHHHHh
Q 045548 172 KLHKYA--SSADKTMKLYQGFLHDLLFEP-------ERDDIVKDIIDWLCCR 214 (221)
Q Consensus 172 ~~~~~~--~~~~~~~~~~~~~~H~i~~e~-------~~~~v~~~i~~fl~~~ 214 (221)
.+.+.+ .....++++|+|++|...... ..++.++.+++||++.
T Consensus 166 ~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 166 ALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp HHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 777666 234689999999999877642 2477888899999764
No 76
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.18 E-value=4.9e-11 Score=94.02 Aligned_cols=195 Identities=18% Similarity=0.243 Sum_probs=67.9
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcC----CCCCeEEEecchhHHHHHHHhcCCCC---CCCccEEEEeCCcccCCCCcc
Q 045548 7 LHAYVHSLDAAVKDMKLFVEKVLADN----PGLPCFCFGHSTGAAIVLKAVLDPKF---EANVAGVVLTSPAVGVEPSHP 79 (221)
Q Consensus 7 ~~g~~~~~~~~~~dl~~~~~~~~~~~----~~~p~~l~GhSmGG~ia~~~a~~~~~---~~~i~~lil~sp~~~~~~~~~ 79 (221)
-+|. .|++.=++|+.++++.++... ...+|+|+|||.|..-++.|+.++.. ...|+|+||-+|.........
T Consensus 77 G~G~-~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~ 155 (303)
T PF08538_consen 77 GWGT-SSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILN 155 (303)
T ss_dssp TS-S---HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTT
T ss_pred CcCc-chhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhh
Confidence 3554 589999999999999999873 34579999999999999999753321 357999999999865432211
Q ss_pred HHH---HHHHHHHhh-------cCCCccccccCCCCC--CCCCHHHHHHHhCCCCCcCCCcchhHHHHHHH--H-HHHHH
Q 045548 80 IFV---VLAPIVSFL-------LPRYQISAANKNGMP--VSRDPEALVAKYTDPLVYTGSIRVRTGYEILR--I-TTYLQ 144 (221)
Q Consensus 80 ~~~---~~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~ 144 (221)
... .+...+... .+.-.++........ ..-...+.... ..| + ..-++.+ + .+.++
T Consensus 156 ~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL-~s~----~-----gdDD~FSSDL~de~l~ 225 (303)
T PF08538_consen 156 FLGEREAYEELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSL-ASP----G-----GDDDYFSSDLSDERLK 225 (303)
T ss_dssp SHHH---HHHHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT--S-S----S-----HHHHTHHHHHTT-HHH
T ss_pred cccchHHHHHHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhc-cCC----C-----CcccccCCCCCHHHHH
Confidence 111 122222111 000000000000000 00001111000 000 0 0001100 0 12346
Q ss_pred HhCCCCCCcEEEeecCCCcccChHHH-HHH---HHHcCC---CCceEEEcCCcccccCCCCC---hHHHHHHHHHHHH
Q 045548 145 RNLNRLKVPFLLLHGTADTVTDPEAS-KKL---HKYASS---ADKTMKLYQGFLHDLLFEPE---RDDIVKDIIDWLC 212 (221)
Q Consensus 145 ~~~~~i~~P~Lii~G~~D~iv~~~~~-~~~---~~~~~~---~~~~~~~~~~~~H~i~~e~~---~~~v~~~i~~fl~ 212 (221)
+.+.+++.|+|++.|++|..||...- +.+ |+.+.. ......++||+.|.+-.+.+ ++.+.+.+..||+
T Consensus 226 ~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 226 KTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp HTGGG--S-EEEEEE--TT-----------------------------------------------------------
T ss_pred HHhccCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 67888999999999999999996421 222 222211 12345688999998765432 3456666777763
No 77
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.18 E-value=4.8e-10 Score=95.39 Aligned_cols=173 Identities=15% Similarity=0.095 Sum_probs=98.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHH----Hh-cCCCCCCCccEEEEeCCcccCCCCcc---H---
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLK----AV-LDPKFEANVAGVVLTSPAVGVEPSHP---I--- 80 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~----~a-~~~~~~~~i~~lil~sp~~~~~~~~~---~--- 80 (221)
-++++|++.+.+.++.+.......++.++||||||.+++. ++ .+++ .+|+.+++.++.+....... +
T Consensus 265 ~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~--~~V~sltllatplDf~~~g~l~~f~~e 342 (560)
T TIGR01839 265 WGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQL--RKVNSLTYLVSLLDSTMESPAALFADE 342 (560)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCC--CceeeEEeeecccccCCCCcchhccCh
Confidence 3789999999999999988877778999999999999885 33 3331 37999998776554331110 0
Q ss_pred --HHHHH-----------HHHHh----hcCCCccccccCCCCCCCCC--HHHHHHHhCCCCCcCCCcchhHHHHHHHHH-
Q 045548 81 --FVVLA-----------PIVSF----LLPRYQISAANKNGMPVSRD--PEALVAKYTDPLVYTGSIRVRTGYEILRIT- 140 (221)
Q Consensus 81 --~~~~~-----------~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 140 (221)
..... ..+.. ..|.-.+............. ...+...+.|.-.+.+ ....+++++.
T Consensus 343 ~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg----~~~~e~l~ly~ 418 (560)
T TIGR01839 343 QTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPA----AFHGDLLDMFK 418 (560)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchH----HHHHHHHHHHh
Confidence 00000 01111 00100000000000000000 0112333334322222 2222333221
Q ss_pred -HHH-----------HHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCccc
Q 045548 141 -TYL-----------QRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLH 192 (221)
Q Consensus 141 -~~~-----------~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H 192 (221)
+.+ .-++.+|+||+|++.|++|+|+|++++..+.+.+.+ +++++..+ +||
T Consensus 419 ~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGH 480 (560)
T TIGR01839 419 SNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGH 480 (560)
T ss_pred cCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCc
Confidence 111 124678999999999999999999999999998876 57777775 567
No 78
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.15 E-value=2.4e-09 Score=85.15 Aligned_cols=150 Identities=21% Similarity=0.205 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcCCC
Q 045548 17 AVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPRY 95 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (221)
+++++..+++.... ....+++++||||||.+++.++. +| +.++++++.+|+..... ..+.. ..+..++
T Consensus 121 ~~~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p---~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~l--- 189 (275)
T TIGR02821 121 IVQELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNP---DRFKSVSAFAPIVAPSR-CPWGQ---KAFSAYL--- 189 (275)
T ss_pred HHHHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCc---ccceEEEEECCccCccc-CcchH---HHHHHHh---
Confidence 34556555554211 12246999999999999998876 44 47999999998755321 11100 0000000
Q ss_pred ccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccCh-HHHHHHH
Q 045548 96 QISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDP-EASKKLH 174 (221)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~-~~~~~~~ 174 (221)
..+.+.. . ..+| .. .. ... ....|+++.+|+.|.++|. ..+..+.
T Consensus 190 ------------~~~~~~~-~-~~~~------------~~------~~-~~~-~~~~plli~~G~~D~~v~~~~~~~~~~ 235 (275)
T TIGR02821 190 ------------GADEAAW-R-SYDA------------SL------LV-ADG-GRHSTILIDQGTADQFLDEQLRPDAFE 235 (275)
T ss_pred ------------cccccch-h-hcch------------HH------HH-hhc-ccCCCeeEeecCCCcccCccccHHHHH
Confidence 0000000 0 0000 00 01 112 2467999999999999998 3444444
Q ss_pred HHcC--CCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 175 KYAS--SADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 175 ~~~~--~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
+.+. ....++..+||.+|...+ ....+.+.++|..++
T Consensus 236 ~~l~~~g~~v~~~~~~g~~H~f~~---~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 236 QACRAAGQALTLRRQAGYDHSYYF---IASFIADHLRHHAER 274 (275)
T ss_pred HHHHHcCCCeEEEEeCCCCccchh---HHHhHHHHHHHHHhh
Confidence 4432 224688899999997533 466777777777664
No 79
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.11 E-value=9.9e-10 Score=88.80 Aligned_cols=164 Identities=19% Similarity=0.177 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCCCeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHh
Q 045548 14 LDAAVKDMKLFVEKVLAD--NPGLPCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSF 90 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~--~~~~p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~ 90 (221)
+...+.|....++.+... .+...+.+.|.|.||.+++.+| +++ +|++++..-|++..... .+..
T Consensus 152 yr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~----rv~~~~~~vP~l~d~~~---------~~~~ 218 (320)
T PF05448_consen 152 YRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP----RVKAAAADVPFLCDFRR---------ALEL 218 (320)
T ss_dssp HHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS----T-SEEEEESESSSSHHH---------HHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc----cccEEEecCCCccchhh---------hhhc
Confidence 344567888888877753 2234799999999999999775 565 79999999887543110 0000
Q ss_pred hcCCCccccccCCCCCCCCCHHHHHHHh--CCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChH
Q 045548 91 LLPRYQISAANKNGMPVSRDPEALVAKY--TDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPE 168 (221)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~ 168 (221)
... . .. ...+..++ .|+.- ......++.+.+.+ .....++|++|+++-.|-.|++|||.
T Consensus 219 -------~~~--~----~~-y~~~~~~~~~~d~~~----~~~~~v~~~L~Y~D-~~nfA~ri~~pvl~~~gl~D~~cPP~ 279 (320)
T PF05448_consen 219 -------RAD--E----GP-YPEIRRYFRWRDPHH----EREPEVFETLSYFD-AVNFARRIKCPVLFSVGLQDPVCPPS 279 (320)
T ss_dssp -------T----S----TT-THHHHHHHHHHSCTH----CHHHHHHHHHHTT--HHHHGGG--SEEEEEEETT-SSS-HH
T ss_pred -------CCc--c----cc-HHHHHHHHhccCCCc----ccHHHHHHHHhhhh-HHHHHHHcCCCEEEEEecCCCCCCch
Confidence 000 0 00 00011110 01100 00011122221111 12235679999999999999999999
Q ss_pred HHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 169 ASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
..-..++++++ .|++.+|+..+|+.. .+.-.+..++||.++
T Consensus 280 t~fA~yN~i~~-~K~l~vyp~~~He~~----~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 280 TQFAAYNAIPG-PKELVVYPEYGHEYG----PEFQEDKQLNFLKEH 320 (320)
T ss_dssp HHHHHHCC--S-SEEEEEETT--SSTT----HHHHHHHHHHHHHH-
T ss_pred hHHHHHhccCC-CeeEEeccCcCCCch----hhHHHHHHHHHHhcC
Confidence 99999999976 599999999999742 232367888998763
No 80
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.08 E-value=2.1e-09 Score=78.52 Aligned_cols=133 Identities=22% Similarity=0.229 Sum_probs=94.9
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCe-EEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccH
Q 045548 2 GGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPC-FCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPI 80 (221)
Q Consensus 2 G~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~-~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~ 80 (221)
|+|+|...+ =---.+|....+++++.++|+.+. .+.|.|+|+.|++.+|.+. +.....|..+|..+.
T Consensus 72 G~S~G~fD~---GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~---~e~~~~is~~p~~~~------ 139 (210)
T COG2945 72 GRSQGEFDN---GIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRR---PEILVFISILPPINA------ 139 (210)
T ss_pred ccccCcccC---CcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhc---ccccceeeccCCCCc------
Confidence 788885322 123468999999999999999887 7889999999999988642 124444444332110
Q ss_pred HHHHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecC
Q 045548 81 FVVLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGT 160 (221)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~ 160 (221)
++ ...+....+|.++|+|+
T Consensus 140 -----------------------------------------------------~d--------fs~l~P~P~~~lvi~g~ 158 (210)
T COG2945 140 -----------------------------------------------------YD--------FSFLAPCPSPGLVIQGD 158 (210)
T ss_pred -----------------------------------------------------hh--------hhhccCCCCCceeEecC
Confidence 00 01233457899999999
Q ss_pred CCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 161 ADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 161 ~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
.|.++++...-++.+. ...++++++++.|..+. ....+.+.+.+|+.
T Consensus 159 ~Ddvv~l~~~l~~~~~---~~~~~i~i~~a~HFF~g--Kl~~l~~~i~~~l~ 205 (210)
T COG2945 159 ADDVVDLVAVLKWQES---IKITVITIPGADHFFHG--KLIELRDTIADFLE 205 (210)
T ss_pred hhhhhcHHHHHHhhcC---CCCceEEecCCCceecc--cHHHHHHHHHHHhh
Confidence 9999999887665544 34578899999997554 46778899999985
No 81
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.06 E-value=4.1e-09 Score=77.68 Aligned_cols=114 Identities=18% Similarity=0.255 Sum_probs=73.3
Q ss_pred HHHHHHHHHHhcCC--CCCeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcCCCc
Q 045548 20 DMKLFVEKVLADNP--GLPCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPRYQ 96 (221)
Q Consensus 20 dl~~~~~~~~~~~~--~~p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (221)
++.++++.+..... +.+++|+|||+|+..+++++ ... ..+|+|++|+||+..... . +
T Consensus 38 ~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~~~--~~~v~g~lLVAp~~~~~~-~--------------~--- 97 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAEQS--QKKVAGALLVAPFDPDDP-E--------------P--- 97 (171)
T ss_dssp -HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHHTC--CSSEEEEEEES--SCGCH-H--------------C---
T ss_pred CHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhhcc--cccccEEEEEcCCCcccc-c--------------c---
Confidence 56777777776532 45799999999999999998 432 348999999998632100 0 0
Q ss_pred cccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHH
Q 045548 97 ISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKY 176 (221)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~ 176 (221)
...... .+.. . ....+.+|.+++.+++|++||.+.++++.++
T Consensus 98 ~~~~~~---~f~~------------------~-----------------p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~ 139 (171)
T PF06821_consen 98 FPPELD---GFTP------------------L-----------------PRDPLPFPSIVIASDNDPYVPFERAQRLAQR 139 (171)
T ss_dssp CTCGGC---CCTT------------------S-----------------HCCHHHCCEEEEEETTBSSS-HHHHHHHHHH
T ss_pred hhhhcc---cccc------------------C-----------------cccccCCCeEEEEcCCCCccCHHHHHHHHHH
Confidence 000000 0000 0 0112245669999999999999999999999
Q ss_pred cCCCCceEEEcCCccccc
Q 045548 177 ASSADKTMKLYQGFLHDL 194 (221)
Q Consensus 177 ~~~~~~~~~~~~~~~H~i 194 (221)
+. .+++.++++||..
T Consensus 140 l~---a~~~~~~~~GHf~ 154 (171)
T PF06821_consen 140 LG---AELIILGGGGHFN 154 (171)
T ss_dssp HT----EEEEETS-TTSS
T ss_pred cC---CCeEECCCCCCcc
Confidence 85 4899999999964
No 82
>COG0400 Predicted esterase [General function prediction only]
Probab=98.96 E-value=2e-08 Score=75.98 Aligned_cols=120 Identities=25% Similarity=0.339 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHhcCC--CCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcCCC
Q 045548 19 KDMKLFVEKVLADNP--GLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPRY 95 (221)
Q Consensus 19 ~dl~~~~~~~~~~~~--~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (221)
+.+.++++.+..++. ..+++++|+|-|+.+++...+ +| ..++++|+.+|+.-..
T Consensus 81 ~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~---~~~~~ail~~g~~~~~-------------------- 137 (207)
T COG0400 81 EKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLP---GLFAGAILFSGMLPLE-------------------- 137 (207)
T ss_pred HHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCc---hhhccchhcCCcCCCC--------------------
Confidence 345566666655542 247999999999999998875 44 3688888888751100
Q ss_pred ccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHH
Q 045548 96 QISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHK 175 (221)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~ 175 (221)
. . . .-..-.+|+|++||++|++||...+.++.+
T Consensus 138 ---~------~--~------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~ 170 (207)
T COG0400 138 ---P------E--L------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAE 170 (207)
T ss_pred ---C------c--c------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHH
Confidence 0 0 0 000126799999999999999988777766
Q ss_pred HcC--CCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 176 YAS--SADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 176 ~~~--~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
.+. ..+.+..+++ .||++ .++.++++.+|+.+.
T Consensus 171 ~l~~~g~~v~~~~~~-~GH~i-----~~e~~~~~~~wl~~~ 205 (207)
T COG0400 171 YLTASGADVEVRWHE-GGHEI-----PPEELEAARSWLANT 205 (207)
T ss_pred HHHHcCCCEEEEEec-CCCcC-----CHHHHHHHHHHHHhc
Confidence 553 3456778888 89987 355667788888764
No 83
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.96 E-value=1.4e-09 Score=83.11 Aligned_cols=70 Identities=21% Similarity=0.361 Sum_probs=42.4
Q ss_pred CCCCCCcEEEeecCCCcccChHH-HHHHHHHcCCC----CceEEEcCCcccccCCC--C---------------------
Q 045548 147 LNRLKVPFLLLHGTADTVTDPEA-SKKLHKYASSA----DKTMKLYQGFLHDLLFE--P--------------------- 198 (221)
Q Consensus 147 ~~~i~~P~Lii~G~~D~iv~~~~-~~~~~~~~~~~----~~~~~~~~~~~H~i~~e--~--------------------- 198 (221)
+.++++|+|++.|++|.+.|... ++.+.+++... ..++..|+++||.+... +
T Consensus 111 vE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~ 190 (213)
T PF08840_consen 111 VEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPE 190 (213)
T ss_dssp GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HH
T ss_pred HHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChH
Confidence 45789999999999999998754 44445544322 35778899999987431 1
Q ss_pred ----ChHHHHHHHHHHHHHhhc
Q 045548 199 ----ERDDIVKDIIDWLCCRVH 216 (221)
Q Consensus 199 ----~~~~v~~~i~~fl~~~~~ 216 (221)
..++.|+.+++||++.++
T Consensus 191 ~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 191 AHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 236788999999998764
No 84
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.91 E-value=6.9e-09 Score=81.75 Aligned_cols=69 Identities=25% Similarity=0.269 Sum_probs=55.0
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCccc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~ 73 (221)
||.|++.... .+++..++|+..+++.+.... ..|++|+||||||.+++.++.. ++++++++|+.+|...
T Consensus 67 ~G~S~g~~~~-~~~~~~~~Dv~~ai~~L~~~~-~~~v~LvG~SmGG~vAl~~A~~--~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 67 CGDSAGDFAA-ARWDVWKEDVAAAYRWLIEQG-HPPVTLWGLRLGALLALDAANP--LAAKCNRLVLWQPVVS 135 (266)
T ss_pred CCCCCCcccc-CCHHHHHHHHHHHHHHHHhcC-CCCEEEEEECHHHHHHHHHHHh--CccccceEEEeccccc
Confidence 7889875443 478888999999998887653 4689999999999999988753 1247999999999755
No 85
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.90 E-value=4.4e-08 Score=73.09 Aligned_cols=55 Identities=20% Similarity=0.188 Sum_probs=40.7
Q ss_pred CCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 150 LKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 150 i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
-..++++++++.|.++|.+.+...++. ....+.+|+.|.+. +.++....|.+|+.
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~~~~~~-----~~~~i~~ggdH~f~---~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAVAKYRG-----CAQIIEEGGDHSFQ---DFEEYLPQIIAFLQ 187 (187)
T ss_pred CCccEEEEEecCCcccCHHHHHHHhcC-----ceEEEEeCCCCCCc---cHHHHHHHHHHhhC
Confidence 357999999999999999766554432 23445688899652 36778888998873
No 86
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.88 E-value=2e-07 Score=75.13 Aligned_cols=67 Identities=24% Similarity=0.335 Sum_probs=53.1
Q ss_pred HhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcC-CcccccCCCCChHHHHHHHHHHHHH
Q 045548 145 RNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQ-GFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 145 ~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~-~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
+.+.++++|+|++.-+.|.+.|++..+.+.+.++.... +..++ ..||+-|+. +.+.+...|..||+.
T Consensus 300 ~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S~~GHDaFL~-e~~~~~~~i~~fL~~ 367 (368)
T COG2021 300 AALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDSPYGHDAFLV-ESEAVGPLIRKFLAL 367 (368)
T ss_pred HHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecCCCCchhhhc-chhhhhHHHHHHhhc
Confidence 44788999999999999999999999999998876533 65554 479988775 345577888888864
No 87
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.88 E-value=2.1e-08 Score=76.61 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHhcCC--CCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCc
Q 045548 17 AVKDMKLFVEKVLADNP--GLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPA 71 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~--~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~ 71 (221)
...|+..+++.+..++. ..+++|+||||||.+++.++. +| +.+.+++..++.
T Consensus 75 ~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~~~~~g~ 129 (212)
T TIGR01840 75 EVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYP---DVFAGGASNAGL 129 (212)
T ss_pred cHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCc---hhheEEEeecCC
Confidence 45677778888776643 247999999999999998875 44 368888776643
No 88
>PLN00021 chlorophyllase
Probab=98.87 E-value=4.2e-08 Score=79.23 Aligned_cols=126 Identities=13% Similarity=0.207 Sum_probs=80.6
Q ss_pred CCeEEEecchhHHHHHHHhc-CCC--CCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcCCCccccccCCCCCCCCCH
Q 045548 35 LPCFCFGHSTGAAIVLKAVL-DPK--FEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPRYQISAANKNGMPVSRDP 111 (221)
Q Consensus 35 ~p~~l~GhSmGG~ia~~~a~-~~~--~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (221)
.+++++||||||.+++.++. +++ ...+++++|+++|+.+.... .. .
T Consensus 126 ~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~----------------~~-------------~-- 174 (313)
T PLN00021 126 SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKG----------------KQ-------------T-- 174 (313)
T ss_pred hheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccc----------------cC-------------C--
Confidence 36999999999999999885 332 11368999999887443100 00 0
Q ss_pred HHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCc-----c----cChHH-HHHHHHHcCCCC
Q 045548 112 EALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADT-----V----TDPEA-SKKLHKYASSAD 181 (221)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-----i----v~~~~-~~~~~~~~~~~~ 181 (221)
+|.... .....-++.+|+|++.+..|. + .|... ..+|++.+.. .
T Consensus 175 --------~p~il~-----------------~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~-~ 228 (313)
T PLN00021 175 --------PPPVLT-----------------YAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA-P 228 (313)
T ss_pred --------CCcccc-----------------cCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC-C
Confidence 000000 011222378999999999763 2 33443 4778888764 6
Q ss_pred ceEEEcCCcccccCCCCC----------------------hHHHHHHHHHHHHHhhcC
Q 045548 182 KTMKLYQGFLHDLLFEPE----------------------RDDIVKDIIDWLCCRVHG 217 (221)
Q Consensus 182 ~~~~~~~~~~H~i~~e~~----------------------~~~v~~~i~~fl~~~~~~ 217 (221)
+...+.++++|+-+.|.+ ++.+...++.||...+.+
T Consensus 229 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~ 286 (313)
T PLN00021 229 AVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEG 286 (313)
T ss_pred eeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 888999999997775433 345556677888877643
No 89
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.84 E-value=1.6e-07 Score=72.96 Aligned_cols=131 Identities=15% Similarity=0.209 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHhcC--CCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhc
Q 045548 15 DAAVKDMKLFVEKVLADN--PGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLL 92 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~--~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~ 92 (221)
.....|+...++.+..+- ...+|.++|.||||.+++.++.... .+++.+.--|.
T Consensus 90 ~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~---~v~a~v~fyg~--------------------- 145 (236)
T COG0412 90 AEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP---EVKAAVAFYGG--------------------- 145 (236)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC---CccEEEEecCC---------------------
Confidence 678899999999998653 2346999999999999998875421 46665432211
Q ss_pred CCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHHH
Q 045548 93 PRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKK 172 (221)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~ 172 (221)
. .... .....++++|+|+..|+.|..+|.+....
T Consensus 146 --~-----------~~~~---------------------------------~~~~~~~~~pvl~~~~~~D~~~p~~~~~~ 179 (236)
T COG0412 146 --L-----------IADD---------------------------------TADAPKIKVPVLLHLAGEDPYIPAADVDA 179 (236)
T ss_pred --C-----------CCCc---------------------------------ccccccccCcEEEEecccCCCCChhHHHH
Confidence 0 0000 00144789999999999999999998877
Q ss_pred HHHHcCCC--CceEEEcCCcccccCCCC----------ChHHHHHHHHHHHHHhh
Q 045548 173 LHKYASSA--DKTMKLYQGFLHDLLFEP----------ERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 173 ~~~~~~~~--~~~~~~~~~~~H~i~~e~----------~~~~v~~~i~~fl~~~~ 215 (221)
+.+.+... ..++++|+++.|..+++. ..+..++.+++|+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 180 LAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred HHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 77766544 578899999999777542 25788899999998764
No 90
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.83 E-value=5.7e-08 Score=76.79 Aligned_cols=67 Identities=24% Similarity=0.418 Sum_probs=53.9
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcC--CCCCeEEEecchhHHHHHHHhcC-CCCCCCccEEEEeCCcccCC
Q 045548 9 AYVHSLDAAVKDMKLFVEKVLADN--PGLPCFCFGHSTGAAIVLKAVLD-PKFEANVAGVVLTSPAVGVE 75 (221)
Q Consensus 9 g~~~~~~~~~~dl~~~~~~~~~~~--~~~p~~l~GhSmGG~ia~~~a~~-~~~~~~i~~lil~sp~~~~~ 75 (221)
+...++++.++--.+++++...+. ++.+++|+|||+|+-++++.+.. +....+|.+++++-|.+...
T Consensus 56 ~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 56 GRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred CCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 456789999998889999888865 67889999999999999998753 31235899999999976543
No 91
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.76 E-value=3.6e-08 Score=73.87 Aligned_cols=129 Identities=19% Similarity=0.314 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhc
Q 045548 14 LDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLL 92 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~ 92 (221)
-+....|+..++++++...+...+-++|.||||.++..+.. ++ .+++++..=|.
T Consensus 99 ~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~----~f~a~v~~hps--------------------- 153 (242)
T KOG3043|consen 99 PPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP----EFDAGVSFHPS--------------------- 153 (242)
T ss_pred cccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch----hheeeeEecCC---------------------
Confidence 34566789999999998887788999999999998864432 22 34443322110
Q ss_pred CCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHHH
Q 045548 93 PRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKK 172 (221)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~ 172 (221)
+ .+ .+...++++|+|++.|+.|.++|++....
T Consensus 154 --~-------------~d---------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~ 185 (242)
T KOG3043|consen 154 --F-------------VD---------------------------------SADIANVKAPILFLFAELDEDVPPKDVKA 185 (242)
T ss_pred --c-------------CC---------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHH
Confidence 0 00 12344678999999999999999998887
Q ss_pred HHHHcCCCC---ceEEEcCCcccccCC------CC----ChHHHHHHHHHHHHHhh
Q 045548 173 LHKYASSAD---KTMKLYQGFLHDLLF------EP----ERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 173 ~~~~~~~~~---~~~~~~~~~~H~i~~------e~----~~~~v~~~i~~fl~~~~ 215 (221)
+-+.+.... .++++|+|.+|..+. ++ ..|+.++.++.|+++.+
T Consensus 186 ~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 186 WEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred HHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 766664433 379999999997663 11 24888899999998764
No 92
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.74 E-value=2.7e-07 Score=75.43 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=48.4
Q ss_pred hCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCccc--ccCCCC--ChHHHHH----HHHHHHHHhh
Q 045548 146 NLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLH--DLLFEP--ERDDIVK----DIIDWLCCRV 215 (221)
Q Consensus 146 ~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H--~i~~e~--~~~~v~~----~i~~fl~~~~ 215 (221)
++.+|+||++++.|++|+|+|.++.....+..++ .++++ .-++|| .+.+.+ ...+.+. +..+|+.+.-
T Consensus 325 dL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~-l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~ 400 (445)
T COG3243 325 DLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFV-LSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAK 400 (445)
T ss_pred chhhcccceEEEeecccccCCHHHHHHHHHhcCC-ceEEE-EecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhc
Confidence 4678999999999999999999999887776665 34444 455789 333422 2344444 7778887653
No 93
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.69 E-value=1.4e-07 Score=77.76 Aligned_cols=165 Identities=18% Similarity=0.199 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcC
Q 045548 15 DAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLP 93 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~ 93 (221)
+.+.+.+..++...- .....+|.++|.||||.+|.++| .++ .+|+++|..+|....--..+....-.|.+..-
T Consensus 242 ~~l~~aVLd~L~~~p-~VD~~RV~~~G~SfGGy~AvRlA~le~---~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d-- 315 (411)
T PF06500_consen 242 SRLHQAVLDYLASRP-WVDHTRVGAWGFSFGGYYAVRLAALED---PRLKAVVALGAPVHHFFTDPEWQQRVPDMYLD-- 315 (411)
T ss_dssp CHHHHHHHHHHHHST-TEEEEEEEEEEETHHHHHHHHHHHHTT---TT-SEEEEES---SCGGH-HHHHTTS-HHHHH--
T ss_pred HHHHHHHHHHHhcCC-ccChhheEEEEeccchHHHHHHHHhcc---cceeeEeeeCchHhhhhccHHHHhcCCHHHHH--
Confidence 344444444444321 11224699999999999999987 343 38999999887643210000000000111000
Q ss_pred CCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhC--CCCCCcEEEeecCCCcccChHHHH
Q 045548 94 RYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNL--NRLKVPFLLLHGTADTVTDPEASK 171 (221)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~Lii~G~~D~iv~~~~~~ 171 (221)
.+. .+.++.. .+.+.+..... . +.+. .+.-+ .+..+|+|.+.|++|.++|.+..+
T Consensus 316 ~LA----~rlG~~~-~~~~~l~~el~-~------------~SLk-----~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~ 372 (411)
T PF06500_consen 316 VLA----SRLGMAA-VSDESLRGELN-K------------FSLK-----TQGLLSGRRCPTPLLAINGEDDPVSPIEDSR 372 (411)
T ss_dssp HHH----HHCT-SC-E-HHHHHHHGG-G------------GSTT-----TTTTTTSS-BSS-EEEEEETT-SSS-HHHHH
T ss_pred HHH----HHhCCcc-CCHHHHHHHHH-h------------cCcc-----hhccccCCCCCcceEEeecCCCCCCCHHHHH
Confidence 000 0001110 12222211100 0 0000 01123 567999999999999999999988
Q ss_pred HHHHHcCCCCceEEEcC-CcccccCCCCChHHHHHHHHHHHHHhh
Q 045548 172 KLHKYASSADKTMKLYQ-GFLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 172 ~~~~~~~~~~~~~~~~~-~~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
-+... +.+++...++ +.-|+ ..++.+..+.+||++.+
T Consensus 373 lia~~--s~~gk~~~~~~~~~~~-----gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 373 LIAES--STDGKALRIPSKPLHM-----GYPQALDEIYKWLEDKL 410 (411)
T ss_dssp HHHHT--BTT-EEEEE-SSSHHH-----HHHHHHHHHHHHHHHHH
T ss_pred HHHhc--CCCCceeecCCCcccc-----chHHHHHHHHHHHHHhc
Confidence 76654 3345565555 44476 45778899999998763
No 94
>PRK10162 acetyl esterase; Provisional
Probab=98.68 E-value=1e-06 Score=71.54 Aligned_cols=171 Identities=20% Similarity=0.229 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHhc---C--CCCCeEEEecchhHHHHHHHhcC---CCC-CCCccEEEEeCCcccCCCCccHHHHHH
Q 045548 15 DAAVKDMKLFVEKVLAD---N--PGLPCFCFGHSTGAAIVLKAVLD---PKF-EANVAGVVLTSPAVGVEPSHPIFVVLA 85 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~---~--~~~p~~l~GhSmGG~ia~~~a~~---~~~-~~~i~~lil~sp~~~~~~~~~~~~~~~ 85 (221)
....+|+.+.++++... + ...+++|+|+|+||.+++.+++. ... +.+++++|+..|+...... +-..
T Consensus 129 p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~-~s~~--- 204 (318)
T PRK10162 129 PQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS-VSRR--- 204 (318)
T ss_pred CCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC-hhHH---
Confidence 34566766666665432 1 22469999999999999987642 111 2468999999997664211 1000
Q ss_pred HHHHhhcCCCccccccCCCCCCCC-CHHHHHHHh-CCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCc
Q 045548 86 PIVSFLLPRYQISAANKNGMPVSR-DPEALVAKY-TDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADT 163 (221)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~ 163 (221)
...... ..++. ..+.....+ .++.....+. ... ...++..--.|++|++|+.|.
T Consensus 205 ----~~~~~~---------~~l~~~~~~~~~~~y~~~~~~~~~p~-----~~p------~~~~l~~~lPp~~i~~g~~D~ 260 (318)
T PRK10162 205 ----LLGGVW---------DGLTQQDLQMYEEAYLSNDADRESPY-----YCL------FNNDLTRDVPPCFIAGAEFDP 260 (318)
T ss_pred ----HhCCCc---------cccCHHHHHHHHHHhCCCccccCCcc-----cCc------chhhhhcCCCCeEEEecCCCc
Confidence 000000 00000 001011111 1110000000 000 011221223599999999999
Q ss_pred ccChHHHHHHHHHcC--CCCceEEEcCCcccccCCC----CChHHHHHHHHHHHHHhh
Q 045548 164 VTDPEASKKLHKYAS--SADKTMKLYQGFLHDLLFE----PERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 164 iv~~~~~~~~~~~~~--~~~~~~~~~~~~~H~i~~e----~~~~~v~~~i~~fl~~~~ 215 (221)
+.+ .+..+.+++. ....++++++|..|....- ++..+.++.+.+||.+..
T Consensus 261 L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 261 LLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred CcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 876 3445555442 2357899999999965432 245678888999998764
No 95
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.66 E-value=2e-06 Score=77.34 Aligned_cols=71 Identities=17% Similarity=0.215 Sum_probs=53.6
Q ss_pred HhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCC--CCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhhc
Q 045548 145 RNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASS--ADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRVH 216 (221)
Q Consensus 145 ~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~--~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~~ 216 (221)
..+.+|++|+|++||..|..++++.+.++++.+.. ..+++.+.+ .+|.......+.++.+.+.+|+...+.
T Consensus 449 ~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 449 KDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred hHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhHHHHHHHHHHHHHhccc
Confidence 45678999999999999999999988888887743 346665544 568544433456778889999988764
No 96
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.66 E-value=1.2e-06 Score=68.58 Aligned_cols=158 Identities=16% Similarity=0.142 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC----CCCCCCccEEEEeCCcccCCCCccHHHHHHHHH
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD----PKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIV 88 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~----~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~ 88 (221)
++...+.-+..++..+.++|.=..+-++||||||++++.++.+ +.+| +++.+|.++..+......
T Consensus 81 ~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P-~l~K~V~Ia~pfng~~~~---------- 149 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLP-KLNKLVTIAGPFNGILGM---------- 149 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS--EEEEEEEES--TTTTTCC----------
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCc-ccceEEEeccccCccccc----------
Confidence 4667788899999999998865579999999999999988752 2222 689999887554321100
Q ss_pred HhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecC------CC
Q 045548 89 SFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGT------AD 162 (221)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~------~D 162 (221)
.... .. ..+..+ .|.. .. .....++ ...+..+ .-++.+|-|.|+ .|
T Consensus 150 -------~~~~-~~--~~~~~~---------gp~~----~~-~~y~~l~---~~~~~~~-p~~i~VLnI~G~~~~g~~sD 201 (255)
T PF06028_consen 150 -------NDDQ-NQ--NDLNKN---------GPKS----MT-PMYQDLL---KNRRKNF-PKNIQVLNIYGDLEDGSNSD 201 (255)
T ss_dssp -------SC-T-TT--T-CSTT----------BSS-------HHHHHHH---HTHGGGS-TTT-EEEEEEEESBTTCSBT
T ss_pred -------cccc-hh--hhhccc---------CCcc----cC-HHHHHHH---HHHHhhC-CCCeEEEEEecccCCCCCCC
Confidence 0000 00 000000 0000 00 0011111 1111222 236789999998 89
Q ss_pred cccChHHHHHHHHHcCCC--CceEEEcCC--cccccCCCCChHHHHHHHHHHH
Q 045548 163 TVTDPEASKKLHKYASSA--DKTMKLYQG--FLHDLLFEPERDDIVKDIIDWL 211 (221)
Q Consensus 163 ~iv~~~~~~~~~~~~~~~--~~~~~~~~~--~~H~i~~e~~~~~v~~~i~~fl 211 (221)
.+||..++..+.--+... .-+.+++.| +.|.-+.| .++|.+.|.+||
T Consensus 202 G~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~Lhe--N~~V~~~I~~FL 252 (255)
T PF06028_consen 202 GIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHE--NPQVDKLIIQFL 252 (255)
T ss_dssp SSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGC--CHHHHHHHHHHH
T ss_pred eEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCC--CHHHHHHHHHHh
Confidence 999998877655444332 234455554 68976664 478999999997
No 97
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.61 E-value=5.9e-08 Score=75.06 Aligned_cols=67 Identities=24% Similarity=0.396 Sum_probs=48.3
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeC
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTS 69 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~s 69 (221)
||.|.-..-..-|.++++.|+..+++.+-.+.+ -+++|+||||||+|+...|.....+ .+.|++++.
T Consensus 113 HGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~-~~iilVGHSmGGaIav~~a~~k~lp-sl~Gl~viD 179 (343)
T KOG2564|consen 113 HGETKVENEDDLSLETMSKDFGAVIKELFGELP-PQIILVGHSMGGAIAVHTAASKTLP-SLAGLVVID 179 (343)
T ss_pred cCccccCChhhcCHHHHHHHHHHHHHHHhccCC-CceEEEeccccchhhhhhhhhhhch-hhhceEEEE
Confidence 666654222224789999999999999876543 3699999999999998776432223 488887764
No 98
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.60 E-value=2.4e-06 Score=61.88 Aligned_cols=118 Identities=21% Similarity=0.153 Sum_probs=80.1
Q ss_pred CCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcCCCccccccCCCCCCCCCHHH
Q 045548 34 GLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPRYQISAANKNGMPVSRDPEA 113 (221)
Q Consensus 34 ~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (221)
+.|++|++||+|+..++.++.... .+|+|+.|+||+-.-.+.. .+... ..+
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~--~~V~GalLVAppd~~~~~~-------------~~~~~--------~tf------ 108 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQ--RQVAGALLVAPPDVSRPEI-------------RPKHL--------MTF------ 108 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhh--hccceEEEecCCCcccccc-------------chhhc--------ccc------
Confidence 457999999999999999986432 2799999999862211100 00000 000
Q ss_pred HHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccc
Q 045548 114 LVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHD 193 (221)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 193 (221)
+| ....+.--|.+++++.+|++|+++.++.+.+..++ .++....+||.
T Consensus 109 ------~~-----------------------~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs---~lv~~g~~GHi 156 (181)
T COG3545 109 ------DP-----------------------IPREPLPFPSVVVASRNDPYVSYEHAEDLANAWGS---ALVDVGEGGHI 156 (181)
T ss_pred ------CC-----------------------CccccCCCceeEEEecCCCCCCHHHHHHHHHhccH---hheeccccccc
Confidence 00 01223456889999999999999999999888765 78888889994
Q ss_pred cCCC---CChHHHHHHHHHHHHH
Q 045548 194 LLFE---PERDDIVKDIIDWLCC 213 (221)
Q Consensus 194 i~~e---~~~~~v~~~i~~fl~~ 213 (221)
- -+ ..+++....+.+|+.+
T Consensus 157 N-~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 157 N-AESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred c-hhhcCCCcHHHHHHHHHHhhh
Confidence 2 22 2478888888777764
No 99
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.58 E-value=3.4e-06 Score=65.83 Aligned_cols=64 Identities=17% Similarity=0.247 Sum_probs=49.8
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
+|.+++..+..++-.+-..-+.++++.+... ..+..+|||.|+-.|+.++... ++.|++|++|.
T Consensus 73 f~~t~~~~~~~~~n~er~~~~~~ll~~l~i~---~~~i~~gHSrGcenal~la~~~----~~~g~~lin~~ 136 (297)
T PF06342_consen 73 FGFTPGYPDQQYTNEERQNFVNALLDELGIK---GKLIFLGHSRGCENALQLAVTH----PLHGLVLINPP 136 (297)
T ss_pred CCCCCCCcccccChHHHHHHHHHHHHHcCCC---CceEEEEeccchHHHHHHHhcC----ccceEEEecCC
Confidence 4677776666677777777788888887664 3589999999999999988632 46799999875
No 100
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.51 E-value=3.9e-06 Score=69.57 Aligned_cols=203 Identities=16% Similarity=0.235 Sum_probs=111.9
Q ss_pred CCHHH-HHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCcccCCCCccH-HHHHHH--
Q 045548 12 HSLDA-AVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPAVGVEPSHPI-FVVLAP-- 86 (221)
Q Consensus 12 ~~~~~-~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~~~~~~~~~~-~~~~~~-- 86 (221)
.|+++ ...|+.+.|+.+...-....++.+|||.|+.....++ .+|++..+|+..+++||+......... ......
T Consensus 137 FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~ 216 (403)
T KOG2624|consen 137 FSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFL 216 (403)
T ss_pred cchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccHHHHhhhhhh
Confidence 46777 4469999999998876566899999999999987654 466666789999999998643311111 111111
Q ss_pred ----HHHhhcCCCccccccC--C-CC-CCCC-------------------CHHHHHHHhCCCCC---cCCCcchhHHHHH
Q 045548 87 ----IVSFLLPRYQISAANK--N-GM-PVSR-------------------DPEALVAKYTDPLV---YTGSIRVRTGYEI 136 (221)
Q Consensus 87 ----~~~~~~~~~~~~~~~~--~-~~-~~~~-------------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 136 (221)
++...++...+-+... + .. .++. +...+ ....-|.. ...+.+++...-.
T Consensus 217 ~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~-n~~~~~~~~~h~pagtSvk~~~H~ 295 (403)
T KOG2624|consen 217 GAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNW-NTTLLPVYLAHLPAGTSVKNIVHW 295 (403)
T ss_pred hhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhh-hhcccchhhccCCCCccHHHHHHH
Confidence 1111111111110000 0 00 0001 10000 00000000 0111122111111
Q ss_pred HHHH-----------------HHH---H--HhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCc-eEEEcCCcccc
Q 045548 137 LRIT-----------------TYL---Q--RNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADK-TMKLYQGFLHD 193 (221)
Q Consensus 137 ~~~~-----------------~~~---~--~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~-~~~~~~~~~H~ 193 (221)
..+. .+- . =++.++++|+.+.+|+.|.+++++...++....+.... ....+++..|.
T Consensus 296 ~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHl 375 (403)
T KOG2624|consen 296 AQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHL 375 (403)
T ss_pred HHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccccccccccCCCccce
Confidence 1100 000 0 13356799999999999999999999988777655433 33347888893
Q ss_pred -cCC-CCChHHHHHHHHHHHHHhh
Q 045548 194 -LLF-EPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 194 -i~~-e~~~~~v~~~i~~fl~~~~ 215 (221)
..+ ...+++|++.|++.++...
T Consensus 376 DFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 376 DFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred eeeeccCcHHHHHHHHHHHHHhhh
Confidence 333 3468999999999988653
No 101
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.50 E-value=2.1e-06 Score=66.40 Aligned_cols=158 Identities=22% Similarity=0.241 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHhc--CCCCCeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhc
Q 045548 16 AAVKDMKLFVEKVLAD--NPGLPCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLL 92 (221)
Q Consensus 16 ~~~~dl~~~~~~~~~~--~~~~p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~ 92 (221)
....|+..+++.+... ..+.++.+.|-|.||.+++.++ ++| +|++++..=|.+.--+.. +.
T Consensus 155 ~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~----rik~~~~~~Pfl~df~r~---------i~--- 218 (321)
T COG3458 155 GVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP----RIKAVVADYPFLSDFPRA---------IE--- 218 (321)
T ss_pred eehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh----hhhcccccccccccchhh---------ee---
Confidence 4456777777777653 3356899999999999999775 455 799988877765432110 00
Q ss_pred CCCccccccCCCCCCCCCHHHHHHHhC--CCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHH
Q 045548 93 PRYQISAANKNGMPVSRDPEALVAKYT--DPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEAS 170 (221)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~ 170 (221)
+ .......++..++. +|. --..++.+++.+ +.....++++|+|+.-|-.|++|||...
T Consensus 219 ----~--------~~~~~ydei~~y~k~h~~~-------e~~v~~TL~yfD-~~n~A~RiK~pvL~svgL~D~vcpPstq 278 (321)
T COG3458 219 ----L--------ATEGPYDEIQTYFKRHDPK-------EAEVFETLSYFD-IVNLAARIKVPVLMSVGLMDPVCPPSTQ 278 (321)
T ss_pred ----e--------cccCcHHHHHHHHHhcCch-------HHHHHHHHhhhh-hhhHHHhhccceEEeecccCCCCCChhh
Confidence 0 00001111111111 110 001112222111 1223457899999999999999999988
Q ss_pred HHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 171 KKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
--.++.++. .|++.+|+-..|+-...- ..+++..|++..
T Consensus 279 FA~yN~l~~-~K~i~iy~~~aHe~~p~~----~~~~~~~~l~~l 317 (321)
T COG3458 279 FAAYNALTT-SKTIEIYPYFAHEGGPGF----QSRQQVHFLKIL 317 (321)
T ss_pred HHHhhcccC-CceEEEeeccccccCcch----hHHHHHHHHHhh
Confidence 888998875 699999998889764432 334577777654
No 102
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.49 E-value=1.1e-05 Score=64.63 Aligned_cols=65 Identities=31% Similarity=0.341 Sum_probs=50.3
Q ss_pred CCCcEEEeecCCCcccChHHHHHHHHHc--CC-CCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhhcCC
Q 045548 150 LKVPFLLLHGTADTVTDPEASKKLHKYA--SS-ADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRVHGQ 218 (221)
Q Consensus 150 i~~P~Lii~G~~D~iv~~~~~~~~~~~~--~~-~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~~~~ 218 (221)
.++|++|.||..|.+||+...+.+.++. .. .+.++..+++.+|....-. -..+.++||.+++.++
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~----~~~~a~~Wl~~rf~G~ 285 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA----SAPDALAWLDDRFAGK 285 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc----CcHHHHHHHHHHHCCC
Confidence 4899999999999999999888887764 22 3577888899999753321 2356889999999664
No 103
>PRK10115 protease 2; Provisional
Probab=98.44 E-value=1e-05 Score=72.17 Aligned_cols=163 Identities=18% Similarity=0.185 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHhcCC--CCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcC
Q 045548 17 AVKDMKLFVEKVLADNP--GLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLP 93 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~--~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~ 93 (221)
-.+|+.+.++.+..+.- ..++++.|-|.||.++..++. +| +.++++|...|.+.... ++. .+
T Consensus 504 ~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~P---dlf~A~v~~vp~~D~~~----------~~~--~~ 568 (686)
T PRK10115 504 TFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRP---ELFHGVIAQVPFVDVVT----------TML--DE 568 (686)
T ss_pred cHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcCh---hheeEEEecCCchhHhh----------hcc--cC
Confidence 35677777777765532 236999999999999987763 45 47999999888755321 000 00
Q ss_pred CCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCc-EEEeecCCCcccChHHHHH
Q 045548 94 RYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVP-FLLLHGTADTVTDPEASKK 172 (221)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~Lii~G~~D~iv~~~~~~~ 172 (221)
.. +... .. ...+-+|.. ...++.+..... ..++.+++.| +|+++|.+|.-||+..+.+
T Consensus 569 ~~----------p~~~--~~-~~e~G~p~~-------~~~~~~l~~~SP-~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k 627 (686)
T PRK10115 569 SI----------PLTT--GE-FEEWGNPQD-------PQYYEYMKSYSP-YDNVTAQAYPHLLVTTGLHDSQVQYWEPAK 627 (686)
T ss_pred CC----------CCCh--hH-HHHhCCCCC-------HHHHHHHHHcCc-hhccCccCCCceeEEecCCCCCcCchHHHH
Confidence 00 0000 00 011112210 001111110000 1356678999 5677999999999999888
Q ss_pred HHHHcCC--CCceEEEc---CCcccccCCCCChHHHH---HHHHHHHHHhhcC
Q 045548 173 LHKYASS--ADKTMKLY---QGFLHDLLFEPERDDIV---KDIIDWLCCRVHG 217 (221)
Q Consensus 173 ~~~~~~~--~~~~~~~~---~~~~H~i~~e~~~~~v~---~~i~~fl~~~~~~ 217 (221)
+..++.. .+.+++++ ++.||.. ...+.+.+ .....|+-..+.+
T Consensus 628 ~~a~Lr~~~~~~~~vl~~~~~~~GHg~--~~~r~~~~~~~A~~~aFl~~~~~~ 678 (686)
T PRK10115 628 WVAKLRELKTDDHLLLLCTDMDSGHGG--KSGRFKSYEGVAMEYAFLIALAQG 678 (686)
T ss_pred HHHHHHhcCCCCceEEEEecCCCCCCC--CcCHHHHHHHHHHHHHHHHHHhCC
Confidence 8777643 34577888 8999972 22343343 3446687776644
No 104
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.44 E-value=3.3e-06 Score=60.27 Aligned_cols=111 Identities=22% Similarity=0.246 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcCC
Q 045548 15 DAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPR 94 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~~ 94 (221)
..++..++++.+.+ .+-|.++=||||||-++...+-.- ...|+++++.+=.+.
T Consensus 73 ~~~~~~~aql~~~l----~~gpLi~GGkSmGGR~aSmvade~--~A~i~~L~clgYPfh--------------------- 125 (213)
T COG3571 73 PEYIVAIAQLRAGL----AEGPLIIGGKSMGGRVASMVADEL--QAPIDGLVCLGYPFH--------------------- 125 (213)
T ss_pred HHHHHHHHHHHhcc----cCCceeeccccccchHHHHHHHhh--cCCcceEEEecCccC---------------------
Confidence 34555555555543 345899999999999998665321 235888887762111
Q ss_pred CccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHHHHH
Q 045548 95 YQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLH 174 (221)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~ 174 (221)
+. ..++.+ ..+.+..+++|+||.||+.|.+-..+....
T Consensus 126 ----pp--------GKPe~~----------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~-- 163 (213)
T COG3571 126 ----PP--------GKPEQL----------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVAG-- 163 (213)
T ss_pred ----CC--------CCcccc----------------------------hhhhccCCCCCeEEeecccccccCHHHHHh--
Confidence 10 011100 024677899999999999999988876533
Q ss_pred HHcCCCCceEEEcCCcccccC
Q 045548 175 KYASSADKTMKLYQGFLHDLL 195 (221)
Q Consensus 175 ~~~~~~~~~~~~~~~~~H~i~ 195 (221)
..-++..++++++++.|++-
T Consensus 164 -y~ls~~iev~wl~~adHDLk 183 (213)
T COG3571 164 -YALSDPIEVVWLEDADHDLK 183 (213)
T ss_pred -hhcCCceEEEEeccCccccc
Confidence 22356789999999999874
No 105
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.43 E-value=6e-07 Score=68.32 Aligned_cols=62 Identities=23% Similarity=0.281 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHHHHHHHHhc-----CCCCCeEEEecchhHHHHHHHhcC---CCCCCCccEEEEeCCcccC
Q 045548 12 HSLDAAVKDMKLFVEKVLAD-----NPGLPCFCFGHSTGAAIVLKAVLD---PKFEANVAGVVLTSPAVGV 74 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~-----~~~~p~~l~GhSmGG~ia~~~a~~---~~~~~~i~~lil~sp~~~~ 74 (221)
.++.+.++|+.+.++++.+. .+..+++|+|+|.||.+++.++.. .. ...++++++++|+...
T Consensus 43 ~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~-~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 43 APFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRG-LPKPKGIILISPWTDL 112 (211)
T ss_dssp SSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT-TCHESEEEEESCHSST
T ss_pred ccccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhc-ccchhhhhcccccccc
Confidence 35778899999999998876 444579999999999999988742 21 2259999999997654
No 106
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.42 E-value=5e-07 Score=75.97 Aligned_cols=61 Identities=20% Similarity=0.221 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCC-CCCCccEEEEeCCccc
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPK-FEANVAGVVLTSPAVG 73 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~-~~~~i~~lil~sp~~~ 73 (221)
..+.+.+++.++++.+....+..|++|+||||||++++.++. +|+ ....|+.+|.+|++..
T Consensus 140 ~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 140 RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCC
Confidence 356788999999999988887889999999999999998864 442 1235899988876543
No 107
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.38 E-value=6e-06 Score=63.57 Aligned_cols=174 Identities=17% Similarity=0.180 Sum_probs=88.6
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC-CCCCCCccEEEEeCCc-ccCCCCccHHH-HHHHH
Q 045548 11 VHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD-PKFEANVAGVVLTSPA-VGVEPSHPIFV-VLAPI 87 (221)
Q Consensus 11 ~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~-~~~~~~i~~lil~sp~-~~~~~~~~~~~-~~~~~ 87 (221)
..+++++++++.+.|... .++.|++|+|||+||.+|..+|.. ......+..|++++++ -.......... ....+
T Consensus 45 ~~si~~la~~y~~~I~~~---~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~ 121 (229)
T PF00975_consen 45 PDSIEELASRYAEAIRAR---QPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQF 121 (229)
T ss_dssp ESSHHHHHHHHHHHHHHH---TSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHH
T ss_pred CCCHHHHHHHHHHHhhhh---CCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHH
Confidence 357888888877666654 345599999999999999988742 1112368999988732 11111000000 00001
Q ss_pred HHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhC--CCC---CCcEEEeecCCC
Q 045548 88 VSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNL--NRL---KVPFLLLHGTAD 162 (221)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i---~~P~Lii~G~~D 162 (221)
............ ....+.+.+ ...............+. ..+ .+|..+....+|
T Consensus 122 ~~~~~~~~~~~~------~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (229)
T PF00975_consen 122 IEELRRIGGTPD------ASLEDEELL----------------ARLLRALRDDFQALENYSIRPIDKQKVPITLFYALDD 179 (229)
T ss_dssp HHHHHHHCHHHH------HHCHHHHHH----------------HHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSS
T ss_pred HHHHHHhcCCch------hhhcCHHHH----------------HHHHHHHHHHHHHHhhccCCccccCCCcEEEEecCCC
Confidence 110000000000 000000000 00001110001111222 222 457899999999
Q ss_pred cccChH---HHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHH
Q 045548 163 TVTDPE---ASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWL 211 (221)
Q Consensus 163 ~iv~~~---~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl 211 (221)
+..... .... ++.+.....+++.++| .|..+..+...++.+.|.+||
T Consensus 180 ~~~~~~~~~~~~~-W~~~~~~~~~~~~v~G-~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 180 PLVSMDRLEEADR-WWDYTSGDVEVHDVPG-DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp SSSSHHCGGHHCH-HHGCBSSSEEEEEESS-ETTGHHSTTHHHHHHHHHHHH
T ss_pred ccccchhhhhHHH-HHHhcCCCcEEEEEcC-CCcEecchHHHHHHHHHhccC
Confidence 988877 3333 4444444567788886 786555545678888888775
No 108
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.36 E-value=1.8e-06 Score=66.57 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHhcC-----CCCCeEEEecchhHHHHHHHhcCCC-CCCCccEEEEeCCc
Q 045548 14 LDAAVKDMKLFVEKVLADN-----PGLPCFCFGHSTGAAIVLKAVLDPK-FEANVAGVVLTSPA 71 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~-----~~~p~~l~GhSmGG~ia~~~a~~~~-~~~~i~~lil~sp~ 71 (221)
+.+..+-+.+.++.+...+ +..+++|+||||||+++..++..++ ....++++|.++.+
T Consensus 59 l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 59 LQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 3344445555555555544 5678999999999999988765443 23479999877643
No 109
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.31 E-value=5e-06 Score=65.38 Aligned_cols=188 Identities=16% Similarity=0.200 Sum_probs=94.5
Q ss_pred ccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCccHHHHH
Q 045548 7 LHA-YVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHPIFVVL 84 (221)
Q Consensus 7 ~~g-~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~~~~~~ 84 (221)
+.+ ..+|+|++++++.++++++..+. ++.+|--.|+.|-.++|. +| +++.|+||++|...... |.-+.
T Consensus 74 p~~y~yPsmd~LAe~l~~Vl~~f~lk~----vIg~GvGAGAnIL~rfAl~~p---~~V~GLiLvn~~~~~~g---w~Ew~ 143 (283)
T PF03096_consen 74 PEGYQYPSMDQLAEMLPEVLDHFGLKS----VIGFGVGAGANILARFALKHP---ERVLGLILVNPTCTAAG---WMEWF 143 (283)
T ss_dssp -TT-----HHHHHCTHHHHHHHHT-------EEEEEETHHHHHHHHHHHHSG---GGEEEEEEES---S------HHHHH
T ss_pred cccccccCHHHHHHHHHHHHHhCCccE----EEEEeeccchhhhhhccccCc---cceeEEEEEecCCCCcc---HHHHH
Confidence 444 35799999999999999998865 999999999999999986 55 48999999998644322 21111
Q ss_pred H-HHHHhhcCCCccccccCCC-C--CC-----CCCHHHHH---HHhCCCCCcCCCcchhHHHHHHHHH---HHHHHhCCC
Q 045548 85 A-PIVSFLLPRYQISAANKNG-M--PV-----SRDPEALV---AKYTDPLVYTGSIRVRTGYEILRIT---TYLQRNLNR 149 (221)
Q Consensus 85 ~-~~~~~~~~~~~~~~~~~~~-~--~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 149 (221)
. ++..+.+............ + .+ ..+.+.+. .....- +...-...+++.. +++....+.
T Consensus 144 ~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~------~Np~Nl~~f~~sy~~R~DL~~~~~~ 217 (283)
T PF03096_consen 144 YQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDER------INPKNLALFLNSYNSRTDLSIERPS 217 (283)
T ss_dssp HHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-------TTHHHHHHHHHHHHT-----SECTT
T ss_pred HHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcC------CCHHHHHHHHHHHhccccchhhcCC
Confidence 1 1111111110000000000 0 00 01111111 100000 0000001111111 122334456
Q ss_pred CCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 150 LKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 150 i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
..||+|++-|+.-+.+ +.+.++..++.....++..++++|=++.-| .+.++.+.+.=||+.
T Consensus 218 ~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eE-qP~klaea~~lFlQG 278 (283)
T PF03096_consen 218 LGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEE-QPGKLAEAFKLFLQG 278 (283)
T ss_dssp CCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH--HHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCccccc-CcHHHHHHHHHHHcc
Confidence 6899999999986544 445677777766667888889987766444 678888888888874
No 110
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.31 E-value=6.6e-06 Score=60.85 Aligned_cols=141 Identities=21% Similarity=0.281 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CC-CCCCCccEEEEeCCcccCCCCccHHHHHHHHHHh
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DP-KFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSF 90 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~-~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~ 90 (221)
+-++.+.|+..+++....+.....++|+|.|+|+-+.-.... -| ...++|..++|++|.-...
T Consensus 46 tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~d--------------- 110 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTAD--------------- 110 (192)
T ss_pred CHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcce---------------
Confidence 457788999999999999887788999999999977665432 22 3456899999999852211
Q ss_pred hcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCC-CCcEEEeecCCCc--ccCh
Q 045548 91 LLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRL-KVPFLLLHGTADT--VTDP 167 (221)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~Lii~G~~D~--iv~~ 167 (221)
+.+......+ ...+ + . ... +.+.+.++ ..|++||+|++|. .||.
T Consensus 111 ----Feihv~~wlg--~~~~---------~-~----~~~-------------~~pei~~l~~~~v~CiyG~~E~d~~cp~ 157 (192)
T PF06057_consen 111 ----FEIHVSGWLG--MGGD---------D-A----AYP-------------VIPEIAKLPPAPVQCIYGEDEDDSLCPS 157 (192)
T ss_pred ----EEEEhhhhcC--CCCC---------c-c----cCC-------------chHHHHhCCCCeEEEEEcCCCCCCcCcc
Confidence 0111100000 0000 0 0 000 11234444 4699999998764 4442
Q ss_pred HHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 168 EASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
+...+.+.+.+||.-| ++.+.+.+.+.|++-+++
T Consensus 158 ---------l~~~~~~~i~lpGgHH---fd~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 158 ---------LRQPGVEVIALPGGHH---FDGDYDALAKRILDALKA 191 (192)
T ss_pred ---------ccCCCcEEEEcCCCcC---CCCCHHHHHHHHHHHHhc
Confidence 2234568888998655 355678898998887764
No 111
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.31 E-value=5e-05 Score=58.10 Aligned_cols=161 Identities=14% Similarity=0.148 Sum_probs=81.0
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccHH
Q 045548 2 GGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPIF 81 (221)
Q Consensus 2 G~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~~ 81 (221)
|.|+|.... .+++...+|+..+++++... +...+-|+.-|+-|-||++.+.+. .+.-+|..-.....+
T Consensus 70 GlSsG~I~e-ftms~g~~sL~~V~dwl~~~-g~~~~GLIAaSLSaRIAy~Va~~i----~lsfLitaVGVVnlr------ 137 (294)
T PF02273_consen 70 GLSSGDINE-FTMSIGKASLLTVIDWLATR-GIRRIGLIAASLSARIAYEVAADI----NLSFLITAVGVVNLR------ 137 (294)
T ss_dssp ------------HHHHHHHHHHHHHHHHHT-T---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HH------
T ss_pred cCCCCChhh-cchHHhHHHHHHHHHHHHhc-CCCcchhhhhhhhHHHHHHHhhcc----CcceEEEEeeeeeHH------
Confidence 788887655 38999999999999999854 344699999999999999987643 355556544332211
Q ss_pred HHHHHHHHhhcCCCcccccc-CCCCCC---CCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHH----HHHHHhCCCCCCc
Q 045548 82 VVLAPIVSFLLPRYQISAAN-KNGMPV---SRDPEALVAKYTDPLVYTGSIRVRTGYEILRIT----TYLQRNLNRLKVP 153 (221)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~P 153 (221)
..+.+.... ..+...... .....+ .-+.+. +..++.+.. ..-...++++++|
T Consensus 138 ~TLe~al~~--Dyl~~~i~~lp~dldfeGh~l~~~v------------------Fv~dc~e~~w~~l~ST~~~~k~l~iP 197 (294)
T PF02273_consen 138 DTLEKALGY--DYLQLPIEQLPEDLDFEGHNLGAEV------------------FVTDCFEHGWDDLDSTINDMKRLSIP 197 (294)
T ss_dssp HHHHHHHSS---GGGS-GGG--SEEEETTEEEEHHH------------------HHHHHHHTT-SSHHHHHHHHTT--S-
T ss_pred HHHHHHhcc--chhhcchhhCCCcccccccccchHH------------------HHHHHHHcCCccchhHHHHHhhCCCC
Confidence 111111110 000000000 000000 001111 111111100 1124567889999
Q ss_pred EEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCccccc
Q 045548 154 FLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDL 194 (221)
Q Consensus 154 ~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i 194 (221)
++.+++.+|.+|......++.+.+.+..+++..++|+.|++
T Consensus 198 ~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL 238 (294)
T PF02273_consen 198 FIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDL 238 (294)
T ss_dssp EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-T
T ss_pred EEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchh
Confidence 99999999999999999999999988889999999999986
No 112
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.26 E-value=3.5e-06 Score=70.73 Aligned_cols=56 Identities=23% Similarity=0.138 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHhcC--CCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 14 LDAAVKDMKLFVEKVLADN--PGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~--~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
...+.++++++++.+..+. +-.+++|+||||||.+|..++... +.+|.++++++|+
T Consensus 96 t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~--p~rV~rItgLDPA 153 (442)
T TIGR03230 96 TKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLT--KHKVNRITGLDPA 153 (442)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhC--CcceeEEEEEcCC
Confidence 4567788899999876432 224799999999999999887642 3479999999886
No 113
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.26 E-value=2.2e-06 Score=68.18 Aligned_cols=56 Identities=16% Similarity=0.166 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 14 LDAAVKDMKLFVEKVLAD--NPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~--~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
+....+++..+++.+..+ .+..+++|+||||||.++..++.. ++++++++++++|+
T Consensus 89 ~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~--~~~~v~~iv~LDPa 146 (275)
T cd00707 89 TRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKR--LNGKLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHH--hcCccceeEEecCC
Confidence 445567888899988765 223469999999999999988763 12479999999886
No 114
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.25 E-value=9.3e-06 Score=69.12 Aligned_cols=126 Identities=17% Similarity=0.302 Sum_probs=85.1
Q ss_pred HHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcCCCccccccCCCCC
Q 045548 27 KVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPRYQISAANKNGMP 106 (221)
Q Consensus 27 ~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (221)
++.-++|..|++|+|.|||+++++..... +....|+++|.++=.+... +. .+++
T Consensus 242 ei~gefpha~IiLvGrsmGAlVachVSps-nsdv~V~~vVCigypl~~v----------------------dg--prgi- 295 (784)
T KOG3253|consen 242 EITGEFPHAPIILVGRSMGALVACHVSPS-NSDVEVDAVVCIGYPLDTV----------------------DG--PRGI- 295 (784)
T ss_pred hhhccCCCCceEEEecccCceeeEEeccc-cCCceEEEEEEecccccCC----------------------Cc--ccCC-
Confidence 44456888899999999998888755432 1222488888766221100 00 0000
Q ss_pred CCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEE
Q 045548 107 VSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKL 186 (221)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~ 186 (221)
+ .+.+-+++.|+|++.|..|..|++...+.+.++... ..++++
T Consensus 296 --r----------------------------------DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elhV 338 (784)
T KOG3253|consen 296 --R----------------------------------DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELHV 338 (784)
T ss_pred --c----------------------------------chhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEEE
Confidence 1 123446799999999999999999999999888764 578999
Q ss_pred cCCcccccCCCC--------ChHHHHHHHHHHHHHhh
Q 045548 187 YQGFLHDLLFEP--------ERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 187 ~~~~~H~i~~e~--------~~~~v~~~i~~fl~~~~ 215 (221)
+.+++|.+-... ..++|-..+.+||.+.+
T Consensus 339 I~~adhsmaipk~k~esegltqseVd~~i~~aI~efv 375 (784)
T KOG3253|consen 339 IGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFV 375 (784)
T ss_pred ecCCCccccCCccccccccccHHHHHHHHHHHHHHHH
Confidence 999999765432 24666666666666543
No 115
>PRK04940 hypothetical protein; Provisional
Probab=98.22 E-value=0.00013 Score=53.78 Aligned_cols=52 Identities=12% Similarity=0.066 Sum_probs=41.2
Q ss_pred EEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 155 LLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 155 Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
+++..+.|.+.+.+.+...+... -++.+.+|+.|-+ - +.++....|++|+++
T Consensus 128 ~vllq~gDEvLDyr~a~~~y~~~----y~~~v~~GGdH~f-~--~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 128 LVILSRNDEVLDSQRTAEELHPY----YEIVWDEEQTHKF-K--NISPHLQRIKAFKTL 179 (180)
T ss_pred EEEEeCCCcccCHHHHHHHhccC----ceEEEECCCCCCC-C--CHHHHHHHHHHHHhc
Confidence 89999999999999887666432 1588899999964 2 468899999999864
No 116
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.16 E-value=4.5e-06 Score=64.58 Aligned_cols=67 Identities=19% Similarity=0.281 Sum_probs=50.6
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC-C-C-CCCCccEEEEeCCccc
Q 045548 7 LHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD-P-K-FEANVAGVVLTSPAVG 73 (221)
Q Consensus 7 ~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~-~-~-~~~~i~~lil~sp~~~ 73 (221)
.+|+...+..+.+++...++.+..++|+.++++.||||||++|..++.. . . ....+..+.+.+|..+
T Consensus 100 h~Gf~~~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg 169 (229)
T cd00519 100 HSGFYSAYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVG 169 (229)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 3566666777788888888888888899999999999999999876642 1 1 1235777788888654
No 117
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.13 E-value=3.9e-05 Score=62.13 Aligned_cols=170 Identities=16% Similarity=0.179 Sum_probs=90.3
Q ss_pred CHHHHHHHHHHHHHHHHhcC-----CCCCeEEEecchhHHHHHHHhcCCC--CCCCccEEEEeCCcccCCCCccHHHHHH
Q 045548 13 SLDAAVKDMKLFVEKVLADN-----PGLPCFCFGHSTGAAIVLKAVLDPK--FEANVAGVVLTSPAVGVEPSHPIFVVLA 85 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~-----~~~p~~l~GhSmGG~ia~~~a~~~~--~~~~i~~lil~sp~~~~~~~~~~~~~~~ 85 (221)
.+...++|+.+.++++.... ...+++++|+|.||.+++.+++... ......+.++++|+.......+...
T Consensus 125 ~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~--- 201 (312)
T COG0657 125 PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLP--- 201 (312)
T ss_pred CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchh---
Confidence 45666778777777777542 1346999999999999998875321 1225788999999866542110000
Q ss_pred HHHHhhcCCCccccccCCCCCCCCCH-H-HHHHHhC-CCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCC
Q 045548 86 PIVSFLLPRYQISAANKNGMPVSRDP-E-ALVAKYT-DPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTAD 162 (221)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D 162 (221)
.. .. ...+.... . .....+. ...... ..... .+ ....+.. --|+++++|+.|
T Consensus 202 ----~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~s---pl------~~~~~~~-lPP~~i~~a~~D 256 (312)
T COG0657 202 ----GY------GE----ADLLDAAAILAWFADLYLGAAPDRE-DPEAS---PL------ASDDLSG-LPPTLIQTAEFD 256 (312)
T ss_pred ----hc------CC----ccccCHHHHHHHHHHHhCcCccccC-CCccC---cc------ccccccC-CCCEEEEecCCC
Confidence 00 00 00000000 0 0000000 000000 00000 00 0011334 578999999999
Q ss_pred cccChHHHHHHHHHcC--CCCceEEEcCCcccccCC--CCChHHHHHHHHHHHH
Q 045548 163 TVTDPEASKKLHKYAS--SADKTMKLYQGFLHDLLF--EPERDDIVKDIIDWLC 212 (221)
Q Consensus 163 ~iv~~~~~~~~~~~~~--~~~~~~~~~~~~~H~i~~--e~~~~~v~~~i~~fl~ 212 (221)
.+.+ .+..+.+++. ....+++.++|..|.... .++..+.+..+.+|+.
T Consensus 257 ~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 257 PLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred cchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHHH
Confidence 9999 3344444432 234688999999995522 2234445667777776
No 118
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.13 E-value=1e-05 Score=54.46 Aligned_cols=60 Identities=23% Similarity=0.257 Sum_probs=51.8
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
..|+|+++++.|+++|.+.++.+.+.+++ .++++.++.||..+. .....+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~--s~lvt~~g~gHg~~~-~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG--SRLVTVDGAGHGVYA-GGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC--ceEEEEeccCcceec-CCChHHHHHHHHHHHc
Confidence 59999999999999999999999999875 599999999998875 2346777888888864
No 119
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.12 E-value=6.7e-05 Score=67.57 Aligned_cols=156 Identities=21% Similarity=0.188 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHhcC--CCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcCCC
Q 045548 18 VKDMKLFVEKVLADN--PGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPRY 95 (221)
Q Consensus 18 ~~dl~~~~~~~~~~~--~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (221)
++|....++.+.+.. +..++.++|+|-||-+++..+..+. ..-+++.|..+|..... .. .
T Consensus 589 v~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~-~~~fkcgvavaPVtd~~-~y-------------d--- 650 (755)
T KOG2100|consen 589 VKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDP-GDVFKCGVAVAPVTDWL-YY-------------D--- 650 (755)
T ss_pred hHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCc-CceEEEEEEecceeeee-ee-------------c---
Confidence 445555555554432 2236999999999999998765421 12466669999976532 00 0
Q ss_pred ccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcE-EEeecCCCcccChHHHHHHH
Q 045548 96 QISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPF-LLLHGTADTVTDPEASKKLH 174 (221)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-Lii~G~~D~iv~~~~~~~~~ 174 (221)
...+.+. +....+... ++. ...+...+..++.|. |++||+.|.-|+.+.+.+++
T Consensus 651 s~~tery--mg~p~~~~~-------------------~y~----e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~ 705 (755)
T KOG2100|consen 651 STYTERY--MGLPSENDK-------------------GYE----ESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILI 705 (755)
T ss_pred ccccHhh--cCCCccccc-------------------hhh----hccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHH
Confidence 0000000 000000000 000 001122344555555 99999999999999999988
Q ss_pred HHcCC--CCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhhc
Q 045548 175 KYASS--ADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRVH 216 (221)
Q Consensus 175 ~~~~~--~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~~ 216 (221)
+.+.. ...++.+||+..|.+..-..-..+...+..|+...+.
T Consensus 706 ~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 706 KALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred HHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcC
Confidence 87643 2378899999999887755557788999999995443
No 120
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.10 E-value=9.7e-06 Score=58.65 Aligned_cols=46 Identities=22% Similarity=0.263 Sum_probs=37.8
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc
Q 045548 9 AYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 9 g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~ 54 (221)
|....+..+..++...++....++|+..+++.||||||.+|..++.
T Consensus 2 Gf~~~~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~ 47 (153)
T cd00741 2 GFYKAARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGL 47 (153)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHH
Confidence 4445567778888888888887788889999999999999988764
No 121
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.08 E-value=0.00027 Score=55.05 Aligned_cols=64 Identities=14% Similarity=0.122 Sum_probs=53.6
Q ss_pred CCCCCcEEEeecCCCcccChHHHHHHHHHcC--CCCceEEEcCCcccccCCCCChHHHHHHHHHHH
Q 045548 148 NRLKVPFLLLHGTADTVTDPEASKKLHKYAS--SADKTMKLYQGFLHDLLFEPERDDIVKDIIDWL 211 (221)
Q Consensus 148 ~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~--~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl 211 (221)
...++|-|.+.+++|.++|.+..+++.+... ..+.+.+.|+++.|.-+...++++.++.+.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 3457999999999999999998888866543 234678889999999999889999999998874
No 122
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.07 E-value=0.00028 Score=54.28 Aligned_cols=156 Identities=21% Similarity=0.252 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC----CCCCCCccEEEEeCCcccCCCCccHHHHHHHHHH
Q 045548 14 LDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD----PKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVS 89 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~----~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~ 89 (221)
..+...-+...+..++.+|.=..+-++||||||+-...++.+ ..+| .++.+|.++..++..-
T Consensus 115 ~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P-~lnK~V~l~gpfN~~~------------- 180 (288)
T COG4814 115 GLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLP-PLNKLVSLAGPFNVGN------------- 180 (288)
T ss_pred hhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCc-chhheEEecccccccc-------------
Confidence 344466777888888888744458999999999999888742 2232 6888887765444110
Q ss_pred hhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCC--CCcEEEeecC------C
Q 045548 90 FLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRL--KVPFLLLHGT------A 161 (221)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~Lii~G~------~ 161 (221)
..+.-.. ..+..+ .| + .... .+.++...+..++ ++-+|+|.|+ -
T Consensus 181 -l~~de~v-------~~v~~~---------~~----~--~~~t-----~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~t 232 (288)
T COG4814 181 -LVPDETV-------TDVLKD---------GP----G--LIKT-----PYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQT 232 (288)
T ss_pred -cCCCcch-------heeecc---------Cc----c--ccCc-----HHHHHHHhcceeCCCCcEEEEEecccccCCcC
Confidence 0000000 000000 00 0 0000 0122333444444 6889999997 4
Q ss_pred CcccChHHHHHHHHHcCCCCceEE--EcCC--cccccCCCCChHHHHHHHHHHHHH
Q 045548 162 DTVTDPEASKKLHKYASSADKTMK--LYQG--FLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 162 D~iv~~~~~~~~~~~~~~~~~~~~--~~~~--~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
|-.||..++-..+.-...+.+.++ +|+| +.|--+.| .+.|.+.+.+||-+
T Consensus 233 DG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhe--n~~v~~yv~~FLw~ 286 (288)
T COG4814 233 DGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHE--NPTVAKYVKNFLWE 286 (288)
T ss_pred CCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCC--ChhHHHHHHHHhhc
Confidence 568888776665555554434443 4544 78876664 46788899998854
No 123
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.05 E-value=9e-06 Score=67.85 Aligned_cols=58 Identities=16% Similarity=0.221 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC-CC---CCCCccEEEEeCCcc
Q 045548 14 LDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD-PK---FEANVAGVVLTSPAV 72 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~-~~---~~~~i~~lil~sp~~ 72 (221)
.+.+...+...|+.+.... +.|++|+||||||+++..+... +. ....|+++|.+|++.
T Consensus 99 ~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 99 RDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 4567788899999888777 7899999999999999988653 21 123699999988653
No 124
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.04 E-value=1.1e-05 Score=70.30 Aligned_cols=69 Identities=14% Similarity=0.029 Sum_probs=53.1
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhc-CCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCccc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLAD-NPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~-~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~ 73 (221)
||.|+|..... + ...++|+.++++++..+ ..+.++.++||||||.+++.+|... +.+++++|..+++..
T Consensus 64 ~g~S~g~~~~~-~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~--~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 64 RGASEGEFDLL-G-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQ--PPALRAIAPQEGVWD 133 (550)
T ss_pred cccCCCceEec-C-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccC--CCceeEEeecCcccc
Confidence 68899876543 2 56889999999999775 2245899999999999999887642 237999998777643
No 125
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.02 E-value=8.7e-05 Score=58.21 Aligned_cols=190 Identities=16% Similarity=0.125 Sum_probs=100.9
Q ss_pred ccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCCCCccHHHHH
Q 045548 7 LHA-YVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVEPSHPIFVVL 84 (221)
Q Consensus 7 ~~g-~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~~~~~~~~~~ 84 (221)
+-| ..+|+|.+++++..+++++..+. ++-+|--.|+.|..++|+ +| ++|.|+||+++........-|. .
T Consensus 97 p~~y~yPsmd~LAd~l~~VL~~f~lk~----vIg~GvGAGAyIL~rFAl~hp---~rV~GLvLIn~~~~a~gwiew~--~ 167 (326)
T KOG2931|consen 97 PEGYPYPSMDDLADMLPEVLDHFGLKS----VIGMGVGAGAYILARFALNHP---ERVLGLVLINCDPCAKGWIEWA--Y 167 (326)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCcce----EEEecccccHHHHHHHHhcCh---hheeEEEEEecCCCCchHHHHH--H
Confidence 444 35899999999999999998765 889999999999999987 44 5999999998754332211111 1
Q ss_pred HHHHHhhcC---------CCccccccCCCCCCCCCHHHHHHHhCCCC-CcCCCcchhHHHHHHHHHH---HHHHhC----
Q 045548 85 APIVSFLLP---------RYQISAANKNGMPVSRDPEALVAKYTDPL-VYTGSIRVRTGYEILRITT---YLQRNL---- 147 (221)
Q Consensus 85 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~---- 147 (221)
-++++..+. .+.+.-..... ...++.+.+.+ |...+ ....+ .....++++.+ ++.-..
T Consensus 168 ~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e-~~~~~~diVq~-Yr~~l~~~~N~---~Nl~~fl~ayn~R~DL~~~r~~~~ 242 (326)
T KOG2931|consen 168 NKVSSNLLYYYGMTQGVKDYLLAHHFGKE-ELGNNSDIVQE-YRQHLGERLNP---KNLALFLNAYNGRRDLSIERPKLG 242 (326)
T ss_pred HHHHHHHHHhhchhhhHHHHHHHHHhccc-cccccHHHHHH-HHHHHHhcCCh---hHHHHHHHHhcCCCCccccCCCcC
Confidence 111111100 00000000000 01122222211 11000 00000 00011111111 011111
Q ss_pred CCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 148 NRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 148 ~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
..++||+|++-|+.-+-++ .+.+...++......+..+.++|=.. .|..+.++.+.+.=|++.
T Consensus 243 ~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~-~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 243 TTLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLV-QEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred ccccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcc-cccCchHHHHHHHHHHcc
Confidence 1456999999999865443 33344455544456777777887744 454677788888777764
No 126
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.00 E-value=8.8e-06 Score=62.24 Aligned_cols=48 Identities=21% Similarity=0.236 Sum_probs=30.8
Q ss_pred CCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCC
Q 045548 148 NRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFE 197 (221)
Q Consensus 148 ~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e 197 (221)
.+|++|+|-++|.+|.+++++.++.+.+..... .+++..+ +||.+...
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPD-ARVIEHD-GGHHVPRK 205 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH-EEEEEES-SSSS----
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-cEEEEEC-CCCcCcCC
Confidence 357999999999999999999999988887643 4455444 68988664
No 127
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.97 E-value=2.1e-05 Score=55.85 Aligned_cols=65 Identities=18% Similarity=0.302 Sum_probs=42.0
Q ss_pred cccCCHH-HHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc----CC-CCCCCccEEEEeCCccc
Q 045548 9 AYVHSLD-AAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL----DP-KFEANVAGVVLTSPAVG 73 (221)
Q Consensus 9 g~~~~~~-~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~----~~-~~~~~i~~lil~sp~~~ 73 (221)
|+...+. ...+.+.+.++.+..++++..+++.||||||++|..++. +. .....+..+.+.+|..+
T Consensus 37 g~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 37 GFLDAAEDSLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--B
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCcccc
Confidence 3333344 555667777777777888778999999999999987653 11 11235677777777643
No 128
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.97 E-value=9.1e-05 Score=56.77 Aligned_cols=59 Identities=10% Similarity=0.137 Sum_probs=42.8
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHH
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWL 211 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl 211 (221)
-+-+-+..|..|.+||.+....+-++++..+.++-. ++..|..... ..+..++.+.+.+
T Consensus 242 ~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~-~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 242 LDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVK-HAQYMANAVFDMI 300 (301)
T ss_pred CcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeec-ccHHHHHHHHHhh
Confidence 355689999999999999988888888877677766 7888965443 3344555555443
No 129
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.96 E-value=0.00025 Score=53.00 Aligned_cols=57 Identities=30% Similarity=0.381 Sum_probs=43.0
Q ss_pred CCcEEEeecCCCcccChHHHHHH---HHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 151 KVPFLLLHGTADTVTDPEASKKL---HKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~---~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
.+|++..||+.|++||.+-.+.. ++.+... ++.+.|+|.+|.... +-++++..|+++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~-~~f~~y~g~~h~~~~-----~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVR-VTFKPYPGLGHSTSP-----QELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCc-eeeeecCCccccccH-----HHHHHHHHHHHH
Confidence 78999999999999998654443 4444433 899999999998633 345778888875
No 130
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.87 E-value=5.8e-05 Score=67.53 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHHHHHHH------hc------CCCCCeEEEecchhHHHHHHHhcC
Q 045548 12 HSLDAAVKDMKLFVEKVL------AD------NPGLPCFCFGHSTGAAIVLKAVLD 55 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~------~~------~~~~p~~l~GhSmGG~ia~~~a~~ 55 (221)
+++++++.|+..+...+. .+ ++..|++++||||||.++..++..
T Consensus 520 Dn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 520 DNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 378999999999999987 33 567799999999999999998754
No 131
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.87 E-value=0.00086 Score=56.78 Aligned_cols=56 Identities=23% Similarity=0.351 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCC-CeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCc
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGL-PCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~-p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~ 71 (221)
++++...-.+.|++.+...+|+. +++|+|.|-||-.++.+| ..|+ .+.-+|+.+.+
T Consensus 117 Tl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd---~~gplvlaGaP 174 (581)
T PF11339_consen 117 TLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPD---LVGPLVLAGAP 174 (581)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcC---ccCceeecCCC
Confidence 57777778899999999999976 789999999999998775 4554 56777776533
No 132
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.86 E-value=0.0003 Score=53.91 Aligned_cols=49 Identities=20% Similarity=0.156 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhcCC--CCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCC
Q 045548 19 KDMKLFVEKVLADNP--GLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSP 70 (221)
Q Consensus 19 ~dl~~~~~~~~~~~~--~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp 70 (221)
..+..+++++..+++ ..+||+.|+|.||..+..++. +|+ .+.++...|.
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd---~faa~a~~sG 130 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD---LFAAVAVVSG 130 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc---cceEEEeecc
Confidence 346667777766553 347999999999999998875 554 7898877664
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.85 E-value=4.3e-05 Score=56.93 Aligned_cols=138 Identities=14% Similarity=0.207 Sum_probs=88.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCC-eEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHHh
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLP-CFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSF 90 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p-~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~ 90 (221)
.++++.+.|....++.+.+.+++.+ +.+-|||.|+.+++.+...- ...+|.|++|.+..+.+.. +.
T Consensus 112 htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~-r~prI~gl~l~~GvY~l~E----------L~-- 178 (270)
T KOG4627|consen 112 HTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQ-RSPRIWGLILLCGVYDLRE----------LS-- 178 (270)
T ss_pred ccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHh-cCchHHHHHHHhhHhhHHH----------Hh--
Confidence 3678888899999999988888765 55569999999998764321 1127888888776533211 00
Q ss_pred hcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCcccChHHH
Q 045548 91 LLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADTVTDPEAS 170 (221)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~iv~~~~~ 170 (221)
.+.....+.++.+..+ .+ .+ + ...+..+++|+|++.|++|.---.+..
T Consensus 179 -------~te~g~dlgLt~~~ae--------~~-----------Sc-----d-l~~~~~v~~~ilVv~~~~espklieQn 226 (270)
T KOG4627|consen 179 -------NTESGNDLGLTERNAE--------SV-----------SC-----D-LWEYTDVTVWILVVAAEHESPKLIEQN 226 (270)
T ss_pred -------CCccccccCcccchhh--------hc-----------Cc-----c-HHHhcCceeeeeEeeecccCcHHHHhh
Confidence 0000011111111100 00 00 0 124667899999999999987777888
Q ss_pred HHHHHHcCCCCceEEEcCCcccccCC
Q 045548 171 KKLHKYASSADKTMKLYQGFLHDLLF 196 (221)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~H~i~~ 196 (221)
+.|.+++.. ..+..|+|.+|.-..
T Consensus 227 rdf~~q~~~--a~~~~f~n~~hy~I~ 250 (270)
T KOG4627|consen 227 RDFADQLRK--ASFTLFKNYDHYDII 250 (270)
T ss_pred hhHHHHhhh--cceeecCCcchhhHH
Confidence 888887653 589999999995433
No 134
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.78 E-value=7.4e-05 Score=59.24 Aligned_cols=69 Identities=20% Similarity=0.325 Sum_probs=56.0
Q ss_pred CCCCC-CcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCCh--HHHHHHHHHHHHHhh
Q 045548 147 LNRLK-VPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPER--DDIVKDIIDWLCCRV 215 (221)
Q Consensus 147 ~~~i~-~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~--~~v~~~i~~fl~~~~ 215 (221)
+.++. +|+|++||.+|.+||...+..+++......++..+++++.|........ ++.+.++.+|+.+.+
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 34454 8999999999999999999999988765467888899999977754333 488999999998753
No 135
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.75 E-value=0.00059 Score=55.27 Aligned_cols=58 Identities=10% Similarity=0.151 Sum_probs=40.9
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHH
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWL 211 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl 211 (221)
.-.+.++.+++|..||......+-+.-+ .+++.+++| ||.-.+=.+.+.+.+.|.+=+
T Consensus 289 p~~ii~V~A~~DaYVPr~~v~~Lq~~WP--GsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf 346 (348)
T PF09752_consen 289 PSAIIFVAAKNDAYVPRHGVLSLQEIWP--GSEVRYLPG-GHVSAYLLHQEAFRQAIYDAF 346 (348)
T ss_pred CCcEEEEEecCceEechhhcchHHHhCC--CCeEEEecC-CcEEEeeechHHHHHHHHHHh
Confidence 4557889999999999988887666555 468999998 995544333444556666543
No 136
>PLN02454 triacylglycerol lipase
Probab=97.69 E-value=9.4e-05 Score=61.30 Aligned_cols=58 Identities=26% Similarity=0.361 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCC--eEEEecchhHHHHHHHhcC---CCC---CCCccEEEEeCCccc
Q 045548 16 AAVKDMKLFVEKVLADNPGLP--CFCFGHSTGAAIVLKAVLD---PKF---EANVAGVVLTSPAVG 73 (221)
Q Consensus 16 ~~~~dl~~~~~~~~~~~~~~p--~~l~GhSmGG~ia~~~a~~---~~~---~~~i~~lil~sp~~~ 73 (221)
...+++...++.+..++++.+ +++.||||||++|+.+|.+ ... ...+..+.+-+|..+
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 456778888888888887755 9999999999999987632 000 113566677788655
No 137
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.69 E-value=0.0023 Score=50.02 Aligned_cols=107 Identities=14% Similarity=0.237 Sum_probs=67.2
Q ss_pred CeEEEecchhHHHHHHHhcCC---CCCCCccEEEEeCCcccCCCCccHHHHHHHHHHhhcCCCccccccCCCCCCCCCHH
Q 045548 36 PCFCFGHSTGAAIVLKAVLDP---KFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVSFLLPRYQISAANKNGMPVSRDPE 112 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~~~---~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (221)
.+.|.|||-||-++..+++.. ....+++++++++|.-+.....+ .
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~-----------------~--------------- 139 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQ-----------------T--------------- 139 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccC-----------------C---------------
Confidence 699999999999998877521 11237999999999754321100 0
Q ss_pred HHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCcEEEeecCCCc---------ccCh-HHHHHHHHHcCCCCc
Q 045548 113 ALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVPFLLLHGTADT---------VTDP-EASKKLHKYASSADK 182 (221)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~---------iv~~-~~~~~~~~~~~~~~~ 182 (221)
.|.... + ...--+.++|+|+|-.+-+. .+|. .+-++|++.... .+
T Consensus 140 -------~P~v~~----------------~-~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~-p~ 194 (259)
T PF12740_consen 140 -------EPPVLT----------------Y-TPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKP-PS 194 (259)
T ss_pred -------CCcccc----------------C-cccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCC-CE
Confidence 000000 0 01112357899999777663 3333 356788888754 46
Q ss_pred eEEEcCCcccccCCCCC
Q 045548 183 TMKLYQGFLHDLLFEPE 199 (221)
Q Consensus 183 ~~~~~~~~~H~i~~e~~ 199 (221)
-..+.+++||+-+.+..
T Consensus 195 ~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 195 WHFVAKDYGHMDFLDDD 211 (259)
T ss_pred EEEEeCCCCchHhhcCC
Confidence 67777999998777644
No 138
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.62 E-value=9.7e-05 Score=57.47 Aligned_cols=55 Identities=29% Similarity=0.325 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCC
Q 045548 17 AVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVE 75 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~ 75 (221)
+.+++.-++++--... ..+-.++||||||++++...+ +| +.+...+++||.++..
T Consensus 120 L~~~lkP~Ie~~y~~~-~~~~~i~GhSlGGLfvl~aLL~~p---~~F~~y~~~SPSlWw~ 175 (264)
T COG2819 120 LTEQLKPFIEARYRTN-SERTAIIGHSLGGLFVLFALLTYP---DCFGRYGLISPSLWWH 175 (264)
T ss_pred HHHhhHHHHhcccccC-cccceeeeecchhHHHHHHHhcCc---chhceeeeecchhhhC
Confidence 3444555555422222 235899999999999998876 44 4899999999987644
No 139
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.60 E-value=0.00019 Score=61.20 Aligned_cols=73 Identities=21% Similarity=0.225 Sum_probs=52.8
Q ss_pred CCCCCCccc-ccCCHHHHHHHHHHHHHHHHhcCCC---CCeEEEecchhHHHHHHHhc---CCC-----CCCCccEEEEe
Q 045548 1 HGGSDGLHA-YVHSLDAAVKDMKLFVEKVLADNPG---LPCFCFGHSTGAAIVLKAVL---DPK-----FEANVAGVVLT 68 (221)
Q Consensus 1 hG~S~~~~g-~~~~~~~~~~dl~~~~~~~~~~~~~---~p~~l~GhSmGG~ia~~~a~---~~~-----~~~~i~~lil~ 68 (221)
+|.|-...+ +..+.++.++|+.++++....++|+ .|++|+|||+||.++..+|. +.+ ..=.++|+++.
T Consensus 133 ~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IG 212 (462)
T PTZ00472 133 VGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVG 212 (462)
T ss_pred cCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEe
Confidence 466755332 3345688999999999999887775 79999999999999877653 111 11247999988
Q ss_pred CCccc
Q 045548 69 SPAVG 73 (221)
Q Consensus 69 sp~~~ 73 (221)
+|+..
T Consensus 213 Ng~~d 217 (462)
T PTZ00472 213 NGLTD 217 (462)
T ss_pred ccccC
Confidence 87653
No 140
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.57 E-value=0.00013 Score=56.98 Aligned_cols=55 Identities=22% Similarity=0.256 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccCC
Q 045548 17 AVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGVE 75 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~~ 75 (221)
+.+++..+|+.--...++. .+|.|+||||..|+.++. +|+ .+.+++..||.+...
T Consensus 98 l~~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd---~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRHPD---LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHSTT---TESEEEEESEESETT
T ss_pred hhccchhHHHHhcccccce-eEEeccCCCcHHHHHHHHhCcc---ccccccccCcccccc
Confidence 4445555555433322222 799999999999999876 554 799999999876543
No 141
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=97.48 E-value=0.00021 Score=55.84 Aligned_cols=55 Identities=22% Similarity=0.180 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
.++.+..+..+.+..+++.+|+..+.|-|||+||++|..+...- .+-.+.+.||.
T Consensus 254 ~~dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f----glP~VaFesPG 308 (425)
T COG5153 254 EFDRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF----GLPVVAFESPG 308 (425)
T ss_pred hhcchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc----CCceEEecCch
Confidence 35566777888889999999999999999999999998776532 36777788874
No 142
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=97.48 E-value=0.00021 Score=55.84 Aligned_cols=55 Identities=22% Similarity=0.180 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
.++.+..+..+.+..+++.+|+..+.|-|||+||++|..+...- .+-.+.+.||.
T Consensus 254 ~~dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f----glP~VaFesPG 308 (425)
T KOG4540|consen 254 EFDRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF----GLPVVAFESPG 308 (425)
T ss_pred hhcchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc----CCceEEecCch
Confidence 35566777888889999999999999999999999998776532 36777788874
No 143
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.46 E-value=0.00032 Score=54.38 Aligned_cols=60 Identities=17% Similarity=0.262 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc----CC---CCCCCccEEEEeCCccc
Q 045548 14 LDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL----DP---KFEANVAGVVLTSPAVG 73 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~----~~---~~~~~i~~lil~sp~~~ 73 (221)
......++..+++.+....+...|+|++||||+.+.+.+.. .. .....+..+||++|-+.
T Consensus 72 a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 72 ARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred HHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 34456678899998887756778999999999999987642 11 11236889999998644
No 144
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.43 E-value=0.00019 Score=55.06 Aligned_cols=42 Identities=19% Similarity=0.194 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCC--CCeEEEecchhHHHHHHHh
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPG--LPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~--~p~~l~GhSmGG~ia~~~a 53 (221)
++++...+.+.+.+.......+. .|+.++||||||+++-.+.
T Consensus 53 ~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al 96 (217)
T PF05057_consen 53 DGIDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYAL 96 (217)
T ss_pred hhhHHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHHH
Confidence 35666677776666555554444 4899999999999997554
No 145
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.41 E-value=0.004 Score=50.81 Aligned_cols=171 Identities=14% Similarity=0.207 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHH--HHhcCCCCCeEEEecchhHHHHHHHhcC----CCCCCCccEEEEeCCcccCCCCc-cHHH----
Q 045548 14 LDAAVKDMKLFVEK--VLADNPGLPCFCFGHSTGAAIVLKAVLD----PKFEANVAGVVLTSPAVGVEPSH-PIFV---- 82 (221)
Q Consensus 14 ~~~~~~dl~~~~~~--~~~~~~~~p~~l~GhSmGG~ia~~~a~~----~~~~~~i~~lil~sp~~~~~~~~-~~~~---- 82 (221)
+++..+.+..+.+. ++....-.+|+|.|=|.||.||...++. .....+++|.||+-|.++..... +-.+
T Consensus 143 y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~ 222 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLN 222 (336)
T ss_pred chHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhc
Confidence 44444455555553 2222222359999999999999887642 11234799999999987643211 1000
Q ss_pred ----HHHHHHHhhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCCCCCCc-EEEe
Q 045548 83 ----VLAPIVSFLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLNRLKVP-FLLL 157 (221)
Q Consensus 83 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~Lii 157 (221)
...+....+.. ...+.. . + ...+|++.... . .......-..+| +|++
T Consensus 223 ~~~~~~~~~~~~~w~-~~lP~~------~--~------~~~~p~~np~~----~---------~~~~d~~~~~lp~tlv~ 274 (336)
T KOG1515|consen 223 GSPELARPKIDKWWR-LLLPNG------K--T------DLDHPFINPVG----N---------SLAKDLSGLGLPPTLVV 274 (336)
T ss_pred CCcchhHHHHHHHHH-HhCCCC------C--C------CcCCccccccc----c---------ccccCccccCCCceEEE
Confidence 00000000000 000000 0 0 01122221100 0 001122234444 9999
Q ss_pred ecCCCcccChHHHHHHHHHcCC--CCceEEEcCCcccccCC-C---CChHHHHHHHHHHHHHh
Q 045548 158 HGTADTVTDPEASKKLHKYASS--ADKTMKLYQGFLHDLLF-E---PERDDIVKDIIDWLCCR 214 (221)
Q Consensus 158 ~G~~D~iv~~~~~~~~~~~~~~--~~~~~~~~~~~~H~i~~-e---~~~~~v~~~i~~fl~~~ 214 (221)
.++.|.+.+-. ..+.+++.. ...++..+++++|..+. . +...++.+.+.+|+.+.
T Consensus 275 ~ag~D~L~D~~--~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 275 VAGYDVLRDEG--LAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EeCchhhhhhh--HHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 99999888643 223333322 23556789999996554 2 25678888999998753
No 146
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.39 E-value=0.00014 Score=62.59 Aligned_cols=58 Identities=21% Similarity=0.228 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC---C--C--------CCCCccEEEEeCCc
Q 045548 14 LDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD---P--K--------FEANVAGVVLTSPA 71 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~---~--~--------~~~~i~~lil~sp~ 71 (221)
.+.+...+...|+.+.....+.|++|+||||||.+++.+... + . ....|++.|.+||+
T Consensus 192 rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 192 RDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred hhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 367778899999988877667899999999999999987531 1 0 01247888887754
No 147
>PLN02571 triacylglycerol lipase
Probab=97.38 E-value=0.00047 Score=57.31 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhcCCC--CCeEEEecchhHHHHHHHhc
Q 045548 18 VKDMKLFVEKVLADNPG--LPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 18 ~~dl~~~~~~~~~~~~~--~p~~l~GhSmGG~ia~~~a~ 54 (221)
.+++...++.+...+++ .++++.||||||++|..+|.
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAV 245 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHH
Confidence 34555555555555554 47999999999999988764
No 148
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.37 E-value=0.00041 Score=54.36 Aligned_cols=59 Identities=20% Similarity=0.180 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC-CCCCCCccEEEEeCCccc
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD-PKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~-~~~~~~i~~lil~sp~~~ 73 (221)
.+++++++...+ .+++..|+-|++|+|+|+||.+|...|.. ....+.+..++++.+...
T Consensus 45 ~~l~~~a~~yv~---~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 45 ASLDDMAAAYVA---AIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CCHHHHHHHHHH---HHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 355555555554 44455577799999999999999988742 111246899988876544
No 149
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.36 E-value=0.00029 Score=58.78 Aligned_cols=41 Identities=24% Similarity=0.235 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc
Q 045548 14 LDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~ 54 (221)
.+.+...++..++..-+.+.+.|++|++|||||++.+.++.
T Consensus 161 rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~ 201 (473)
T KOG2369|consen 161 RDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLK 201 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHh
Confidence 57788999999999999988799999999999999998875
No 150
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.33 E-value=0.00089 Score=50.58 Aligned_cols=63 Identities=22% Similarity=0.203 Sum_probs=50.6
Q ss_pred CCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhh
Q 045548 147 LNRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 147 ~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
...+++|.|-|.|+.|.++|...+..+++....+ .++...+||.+... ....+.|.+||+...
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a---~vl~HpggH~VP~~---~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA---TVLEHPGGHIVPNK---AKYKEKIADFIQSFL 221 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhcCCC---eEEecCCCccCCCc---hHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999998754 55556689988664 356678888887764
No 151
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.32 E-value=0.023 Score=46.96 Aligned_cols=65 Identities=20% Similarity=0.314 Sum_probs=57.1
Q ss_pred CCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhhcC
Q 045548 148 NRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRVHG 217 (221)
Q Consensus 148 ~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~~~ 217 (221)
.++++|.++|.|..|....+..+..++++++. .|.+..+|+++|.+.. ..+.+.+..|+.....+
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~vPN~~H~~~~----~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYVPNAGHSLIG----SDVVQSLRAFYNRIQNG 323 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeCCCCCcccch----HHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999999987 6899999999998744 77888999999887643
No 152
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.30 E-value=0.0066 Score=52.77 Aligned_cols=68 Identities=13% Similarity=0.117 Sum_probs=51.4
Q ss_pred hCCCCCCcEEEeecCCCcccChHHHHHHHHHcC--CCCceEEEcCCcccccCCCCChHHHHHHHHHHHHH
Q 045548 146 NLNRLKVPFLLLHGTADTVTDPEASKKLHKYAS--SADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCC 213 (221)
Q Consensus 146 ~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~--~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~ 213 (221)
.+++=.--+|++||--|.=|......++...+- .+.-++.+||+-+|.+=+-....-.-..++.|+++
T Consensus 797 klpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 797 KLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred hCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 444444447999999999999888777777653 33468999999999886655556666789999875
No 153
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.28 E-value=0.0005 Score=60.67 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=23.4
Q ss_pred eEEEecchhHHHHHHHhcCCC-CCCCccEEEEeC
Q 045548 37 CFCFGHSTGAAIVLKAVLDPK-FEANVAGVVLTS 69 (221)
Q Consensus 37 ~~l~GhSmGG~ia~~~a~~~~-~~~~i~~lil~s 69 (221)
|+|+||||||.+|.+++..++ ....|+-+|-.|
T Consensus 184 VILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 184 VILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred EEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 999999999999998876654 233455554333
No 154
>PLN02847 triacylglycerol lipase
Probab=97.23 E-value=0.00044 Score=59.52 Aligned_cols=47 Identities=19% Similarity=0.122 Sum_probs=36.2
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh
Q 045548 7 LHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 7 ~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a 53 (221)
.+|.+.+..++.+.+...+..+..++|+-++++.||||||++|..++
T Consensus 223 H~Gml~AArwI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLA 269 (633)
T PLN02847 223 HCGMVAAARWIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLT 269 (633)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHH
Confidence 34554445566666767777777889988999999999999998765
No 155
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.10 E-value=0.0011 Score=51.09 Aligned_cols=52 Identities=19% Similarity=0.407 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC--CCCCCCccEEEE-eCCcc
Q 045548 20 DMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD--PKFEANVAGVVL-TSPAV 72 (221)
Q Consensus 20 dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~--~~~~~~i~~lil-~sp~~ 72 (221)
...++++.+...+++ ++++.|||+||.+|..++.. +...++|.++.. .+|-+
T Consensus 70 ~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 345666666666666 59999999999999987642 333457888764 55643
No 156
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.07 E-value=0.00031 Score=52.20 Aligned_cols=60 Identities=30% Similarity=0.377 Sum_probs=48.9
Q ss_pred ccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC----CCCCCCccEEEEeC
Q 045548 10 YVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD----PKFEANVAGVVLTS 69 (221)
Q Consensus 10 ~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~----~~~~~~i~~lil~s 69 (221)
|..|....+.++...++....+.|+.+++|+|+|.|+.++..++.. +...++|.+++|.+
T Consensus 56 y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfG 119 (179)
T PF01083_consen 56 YGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFG 119 (179)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEec
Confidence 4556788889999999999999999999999999999999987533 11234788988876
No 157
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.03 E-value=0.00028 Score=57.37 Aligned_cols=54 Identities=28% Similarity=0.356 Sum_probs=44.1
Q ss_pred HhCCCCCCcEEEeecCCCcccChH-HHHHHHHHcCCCCceEEEcCCcccccCCCC
Q 045548 145 RNLNRLKVPFLLLHGTADTVTDPE-ASKKLHKYASSADKTMKLYQGFLHDLLFEP 198 (221)
Q Consensus 145 ~~~~~i~~P~Lii~G~~D~iv~~~-~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~ 198 (221)
..+.++++|++++.|..|.+.|+. ...+.+..+++..|.+...+++.|.-+.|.
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~ 299 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLEL 299 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCcccccccc
Confidence 457789999999999999988875 345556677776788899999999888874
No 158
>PLN02310 triacylglycerol lipase
Probab=97.02 E-value=0.001 Score=55.23 Aligned_cols=22 Identities=27% Similarity=0.344 Sum_probs=18.7
Q ss_pred CCCCeEEEecchhHHHHHHHhc
Q 045548 33 PGLPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 33 ~~~p~~l~GhSmGG~ia~~~a~ 54 (221)
++..+.+.||||||++|+.+|.
T Consensus 207 e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 207 EEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred CcceEEEEcccHHHHHHHHHHH
Confidence 4567999999999999988764
No 159
>PLN00413 triacylglycerol lipase
Probab=97.00 E-value=0.0012 Score=55.67 Aligned_cols=34 Identities=21% Similarity=0.352 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh
Q 045548 20 DMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 20 dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a 53 (221)
++...++.+..++|+.++++.||||||++|..++
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA 302 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFT 302 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHH
Confidence 4555566666778888999999999999998765
No 160
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.98 E-value=0.0017 Score=52.60 Aligned_cols=59 Identities=17% Similarity=0.392 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-----CCC-CCCCccEEEEeCCccc
Q 045548 15 DAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-----DPK-FEANVAGVVLTSPAVG 73 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-----~~~-~~~~i~~lil~sp~~~ 73 (221)
..-..+++.+|+.+..+-+-..|+|++||||.-+++.+.+ ..+ .+..|+-+||.+|=..
T Consensus 171 ~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 171 NYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred hhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 3456789999999998877778999999999999987542 222 3457888999998654
No 161
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=96.98 E-value=0.0023 Score=53.90 Aligned_cols=35 Identities=26% Similarity=0.160 Sum_probs=29.2
Q ss_pred CeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCccc
Q 045548 36 PCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~ 73 (221)
..+|.|+||||+.|+.+++ +| +.+.+++..||.++
T Consensus 289 ~~~IaG~S~GGl~AL~~al~~P---d~Fg~v~s~Sgs~w 324 (411)
T PRK10439 289 RTVVAGQSFGGLAALYAGLHWP---ERFGCVLSQSGSFW 324 (411)
T ss_pred ceEEEEEChHHHHHHHHHHhCc---ccccEEEEecccee
Confidence 4789999999999999876 45 48999999998643
No 162
>PLN02408 phospholipase A1
Probab=96.97 E-value=0.0015 Score=53.62 Aligned_cols=38 Identities=18% Similarity=0.158 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhcCCCC--CeEEEecchhHHHHHHHhc
Q 045548 17 AVKDMKLFVEKVLADNPGL--PCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~~--p~~l~GhSmGG~ia~~~a~ 54 (221)
+.+++.+.++.+..++++. .+++.||||||++|..+|.
T Consensus 180 ~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 180 LQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAY 219 (365)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHH
Confidence 3445666666676777654 5999999999999998764
No 163
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.94 E-value=0.0012 Score=56.16 Aligned_cols=39 Identities=28% Similarity=0.520 Sum_probs=25.5
Q ss_pred CCCeEEEecchhHHHHHHHhcC-----CCCCCCccEEEEeCCccc
Q 045548 34 GLPCFCFGHSTGAAIVLKAVLD-----PKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 34 ~~p~~l~GhSmGG~ia~~~a~~-----~~~~~~i~~lil~sp~~~ 73 (221)
+..+++.||||||++|+.+|.+ ++. ..+..+.+-+|-.+
T Consensus 317 ~~SItVTGHSLGGALAtLaA~DIa~~~p~~-~~VtvyTFGsPRVG 360 (525)
T PLN03037 317 EVSLTITGHSLGGALALLNAYEAARSVPAL-SNISVISFGAPRVG 360 (525)
T ss_pred cceEEEeccCHHHHHHHHHHHHHHHhCCCC-CCeeEEEecCCCcc
Confidence 4579999999999999987632 221 13444455566544
No 164
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.94 E-value=0.0038 Score=46.13 Aligned_cols=58 Identities=28% Similarity=0.382 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHhcC-CCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeC-Cccc
Q 045548 14 LDAAVKDMKLFVEKVLADN-PGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTS-PAVG 73 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~-~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~s-p~~~ 73 (221)
-+....+|..|++.+.... ++..+.++|||.|+.++-.++.... ..++.+|+.+ |-.+
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~--~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGG--LRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCC--CCcccEEEECCCCCC
Confidence 3556778999999998877 6778999999999999988876522 3688888875 5433
No 165
>PLN02162 triacylglycerol lipase
Probab=96.91 E-value=0.0016 Score=54.75 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh
Q 045548 20 DMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 20 dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a 53 (221)
.+.+.++.+..++|+.++++.||||||++|..++
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaA 296 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFP 296 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHH
Confidence 3445555555667888899999999999998754
No 166
>PLN02934 triacylglycerol lipase
Probab=96.91 E-value=0.0014 Score=55.65 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh
Q 045548 20 DMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 20 dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a 53 (221)
.+...++.+..++|+.++++.||||||++|..++
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHH
Confidence 3556666677788999999999999999998775
No 167
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=96.88 E-value=0.0027 Score=51.24 Aligned_cols=50 Identities=28% Similarity=0.389 Sum_probs=37.8
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHhcCCC---CCeEEEecchhHHHHHHHhcC
Q 045548 2 GGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPG---LPCFCFGHSTGAAIVLKAVLD 55 (221)
Q Consensus 2 G~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~---~p~~l~GhSmGG~ia~~~a~~ 55 (221)
|.|.|. . +.++++.|..+.++.+..+..+ ..+.+.|||+||+++..++.+
T Consensus 183 g~S~G~---~-s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 183 GSSTGP---P-SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred ccCCCC---C-CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHh
Confidence 455553 3 5699999999999999864322 359999999999998876543
No 168
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.86 E-value=0.006 Score=51.81 Aligned_cols=57 Identities=26% Similarity=0.360 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHHHHHhcC---CCCCeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCcc
Q 045548 13 SLDAAVKDMKLFVEKVLADN---PGLPCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPAV 72 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~---~~~p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~~ 72 (221)
+.++..+|++.|++.++.++ ++.|++++|-|-||++|..+- .+|+ -+.|.+.+|+++
T Consensus 88 t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~---~~~ga~ASSapv 148 (434)
T PF05577_consen 88 TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH---LFDGAWASSAPV 148 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT---T-SEEEEET--C
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC---eeEEEEecccee
Confidence 68999999999999999765 456999999999999998774 4775 688988887654
No 169
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.81 E-value=0.0039 Score=46.91 Aligned_cols=55 Identities=25% Similarity=0.319 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCc
Q 045548 14 LDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPA 71 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~ 71 (221)
++..+..+.+.+........-.++.++||||||.=|+-.++ ++ .+.+.+-.-+|.
T Consensus 120 YdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~---~kykSvSAFAPI 175 (283)
T KOG3101|consen 120 YDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNP---SKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCc---ccccceeccccc
Confidence 45555666666654333222345899999999998875544 33 255655544554
No 170
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.74 E-value=0.0022 Score=49.14 Aligned_cols=38 Identities=26% Similarity=0.377 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc
Q 045548 16 AAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 16 ~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~ 54 (221)
+.+.++.+|++.+...-.. +|=|+||||||.++..+.+
T Consensus 57 ~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 57 ESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp HHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHH
Confidence 3457899999999876555 8999999999999987765
No 171
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=96.74 E-value=0.004 Score=46.59 Aligned_cols=56 Identities=27% Similarity=0.218 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC-CCCCCCccEEEEeCCc
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD-PKFEANVAGVVLTSPA 71 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~-~~~~~~i~~lil~sp~ 71 (221)
+++.+++++...+. ...+..|++++||||||.++..++.. ......+.+++++++.
T Consensus 45 ~~~~~~~~~~~~l~---~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 45 SADALVEAQAEAVL---RAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred CHHHHHHHHHHHHH---HhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 45555555444443 33446689999999999999877642 1122368999887653
No 172
>PLN02324 triacylglycerol lipase
Probab=96.70 E-value=0.0033 Score=52.28 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhcCCC--CCeEEEecchhHHHHHHHhc
Q 045548 17 AVKDMKLFVEKVLADNPG--LPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~--~p~~l~GhSmGG~ia~~~a~ 54 (221)
..+.+...++.+...+++ ..|++.||||||++|..+|.
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 445566666667666765 46999999999999998763
No 173
>PLN02719 triacylglycerol lipase
Probab=96.68 E-value=0.003 Score=53.71 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhcCCC-----CCeEEEecchhHHHHHHHhc
Q 045548 17 AVKDMKLFVEKVLADNPG-----LPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~-----~p~~l~GhSmGG~ia~~~a~ 54 (221)
..+++...++.+...+++ ..+++.||||||++|..+|.
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 345566667777766653 47999999999999998663
No 174
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=96.61 E-value=0.0036 Score=60.21 Aligned_cols=57 Identities=19% Similarity=0.099 Sum_probs=43.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC-CCCCCCccEEEEeCCc
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD-PKFEANVAGVVLTSPA 71 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~-~~~~~~i~~lil~sp~ 71 (221)
.+++.+++++.+.++.+. ++.|++++||||||.++.++|.. ...+.++..++++++.
T Consensus 1113 ~~l~~la~~~~~~i~~~~---~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1113 TSLDEVCEAHLATLLEQQ---PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred CCHHHHHHHHHHHHHhhC---CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 578899999988887653 34589999999999999998752 1223478999988753
No 175
>PLN02753 triacylglycerol lipase
Probab=96.60 E-value=0.0036 Score=53.43 Aligned_cols=38 Identities=21% Similarity=0.332 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHhcCC-----CCCeEEEecchhHHHHHHHhc
Q 045548 17 AVKDMKLFVEKVLADNP-----GLPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~-----~~p~~l~GhSmGG~ia~~~a~ 54 (221)
..+++...++.+...++ +..|++.||||||++|+.+|.
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 34556666666666553 468999999999999998763
No 176
>PLN02761 lipase class 3 family protein
Probab=96.55 E-value=0.004 Score=53.07 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhcC------CCCCeEEEecchhHHHHHHHh
Q 045548 17 AVKDMKLFVEKVLADN------PGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~------~~~p~~l~GhSmGG~ia~~~a 53 (221)
..+++...++.+...+ ++..+++.||||||++|..+|
T Consensus 270 aR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 270 AREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSA 312 (527)
T ss_pred HHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHH
Confidence 3445666666666555 335699999999999998766
No 177
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.53 E-value=0.0052 Score=50.41 Aligned_cols=59 Identities=24% Similarity=0.139 Sum_probs=41.3
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
+.....+.+...++.+.......++.|+||||||.++..++..-....+++.++.++++
T Consensus 105 ~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred cccccHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 33444556666666666665557899999999999999766532223579999887754
No 178
>PLN02802 triacylglycerol lipase
Probab=96.49 E-value=0.0047 Score=52.53 Aligned_cols=36 Identities=28% Similarity=0.319 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCC--CCeEEEecchhHHHHHHHhc
Q 045548 19 KDMKLFVEKVLADNPG--LPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 19 ~dl~~~~~~~~~~~~~--~p~~l~GhSmGG~ia~~~a~ 54 (221)
+++.+-++.+..++++ ..|++.||||||++|..+|.
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVAD 349 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHH
Confidence 4555555666666654 46899999999999997764
No 179
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.46 E-value=0.0074 Score=45.63 Aligned_cols=40 Identities=30% Similarity=0.396 Sum_probs=28.6
Q ss_pred HHHHHHHH-HHHHHHHhcCCCCCeEEEecchhHHHHHHHhc
Q 045548 15 DAAVKDMK-LFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 15 ~~~~~dl~-~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~ 54 (221)
+....|+. +|-..+.....+.|++|+|||-|+.+..+++.
T Consensus 74 ~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred HhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHH
Confidence 33345554 44444445556789999999999999999875
No 180
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=96.45 E-value=0.0046 Score=50.68 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc
Q 045548 19 KDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 19 ~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~ 54 (221)
..+.+.++.+...+|+..+++-||||||++|..+|.
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHH
Confidence 567777777778888889999999999999988763
No 181
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=96.39 E-value=0.0052 Score=45.69 Aligned_cols=66 Identities=23% Similarity=0.358 Sum_probs=51.4
Q ss_pred CCC-CCcEEEeecCCCcccChH---HHHHHHHHcCCCCceEEEcCCcccccCCC-CC-hHHHHHHHHHHHHH
Q 045548 148 NRL-KVPFLLLHGTADTVTDPE---ASKKLHKYASSADKTMKLYQGFLHDLLFE-PE-RDDIVKDIIDWLCC 213 (221)
Q Consensus 148 ~~i-~~P~Lii~G~~D~iv~~~---~~~~~~~~~~~~~~~~~~~~~~~H~i~~e-~~-~~~v~~~i~~fl~~ 213 (221)
+.| ++++|-|=|+.|.|+.+- ++..+...++...|..++.+|+||...+. +- ++++...|.+|+.+
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 445 588898999999999974 56666666666667888889999965554 32 68899999999875
No 182
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=96.38 E-value=0.0032 Score=52.41 Aligned_cols=33 Identities=27% Similarity=0.268 Sum_probs=24.1
Q ss_pred CeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 36 PCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
.+.++|||+||+.++.++... .++++.|++.||
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d---~r~~~~I~LD~W 261 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD---TRFKAGILLDPW 261 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH----TT--EEEEES--
T ss_pred heeeeecCchHHHHHHHHhhc---cCcceEEEeCCc
Confidence 489999999999999876532 379999999987
No 183
>COG4099 Predicted peptidase [General function prediction only]
Probab=96.37 E-value=0.0098 Score=47.16 Aligned_cols=28 Identities=25% Similarity=0.369 Sum_probs=24.3
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcC
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYAS 178 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~ 178 (221)
++|+.++|+.+|+++|.+.++-+++++.
T Consensus 315 ~~piWvfhs~dDkv~Pv~nSrv~y~~lk 342 (387)
T COG4099 315 KAPIWVFHSSDDKVIPVSNSRVLYERLK 342 (387)
T ss_pred cCceEEEEecCCCccccCcceeehHHHH
Confidence 5799999999999999998887777654
No 184
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.24 E-value=0.016 Score=47.78 Aligned_cols=63 Identities=14% Similarity=0.202 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcC---CCCCCCccEEEEeCCcccCC
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD---PKFEANVAGVVLTSPAVGVE 75 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~---~~~~~~i~~lil~sp~~~~~ 75 (221)
.+-....++.+..+.+.+......++|+|-|.||.+++.+.++ ++....-+++||+|||....
T Consensus 173 ~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 173 KYPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred cCchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 3455667777777777744445679999999999999987652 22112458999999997764
No 185
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.23 E-value=0.0079 Score=49.71 Aligned_cols=64 Identities=20% Similarity=0.280 Sum_probs=48.0
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcCC--CCCeEEEecchhHHHHHHHh-cCCCCCCCccEE-EEeCCcccC
Q 045548 7 LHAYVHSLDAAVKDMKLFVEKVLADNP--GLPCFCFGHSTGAAIVLKAV-LDPKFEANVAGV-VLTSPAVGV 74 (221)
Q Consensus 7 ~~g~~~~~~~~~~dl~~~~~~~~~~~~--~~p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~l-il~sp~~~~ 74 (221)
..|++ +.++..+|.++++..++++.. ..||+.+|-|-||+++..+- .+|+ -+.|. +.++|.+..
T Consensus 138 hlgyL-tseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH---iv~GAlAaSAPvl~f 205 (492)
T KOG2183|consen 138 HLGYL-TSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH---IVLGALAASAPVLYF 205 (492)
T ss_pred hhccc-cHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh---hhhhhhhccCceEee
Confidence 45676 678889999999999988632 45999999999999998774 4675 45555 445676544
No 186
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.21 E-value=0.012 Score=48.05 Aligned_cols=57 Identities=19% Similarity=0.165 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhc--CCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 15 DAAVKDMKLFVEKVLAD--NPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~--~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
....+.++.+|+.+... .+-..++|+||||||.||-.++.+-....+|..+.-+.|+
T Consensus 128 ~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPA 186 (331)
T PF00151_consen 128 RLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPA 186 (331)
T ss_dssp HHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B
T ss_pred HHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcc
Confidence 33455667777777632 2223599999999999998877531112368888888775
No 187
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.96 E-value=0.0035 Score=47.54 Aligned_cols=62 Identities=21% Similarity=0.330 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCccc
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~ 73 (221)
.++.+-++|++.+++++........|+|+|||.|..=.+.++-+.-.+..+++.|+.+|...
T Consensus 84 ~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 84 FSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred ccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 36778899999999988875545589999999999998887632111235888899999764
No 188
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=95.53 E-value=0.052 Score=43.02 Aligned_cols=68 Identities=21% Similarity=0.133 Sum_probs=49.0
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcCCC--CCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCccc
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADNPG--LPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~--~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~ 73 (221)
.|.|+|..... ...-.+|..+.|+.+..+ |. -.|.++|.|.+|..++.+|... +..+++++..++...
T Consensus 68 ~g~S~G~~~~~--~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~--~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 68 TGGSEGEFDPM--SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARR--PPHLKAIVPQSGWSD 137 (272)
T ss_dssp STTS-S-B-TT--SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT---TTEEEEEEESE-SB
T ss_pred cccCCCccccC--ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcC--CCCceEEEecccCCc
Confidence 47888864332 567889999999999876 42 3699999999999999887631 237999998776543
No 189
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=95.20 E-value=0.047 Score=44.33 Aligned_cols=36 Identities=28% Similarity=0.223 Sum_probs=28.9
Q ss_pred CCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCc
Q 045548 32 NPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPA 71 (221)
Q Consensus 32 ~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~ 71 (221)
++...++|+|.|.||.-++.+|. +| .++++||-+..
T Consensus 308 f~~edIilygWSIGGF~~~waAs~YP----dVkavvLDAtF 344 (517)
T KOG1553|consen 308 FRQEDIILYGWSIGGFPVAWAASNYP----DVKAVVLDATF 344 (517)
T ss_pred CCccceEEEEeecCCchHHHHhhcCC----CceEEEeecch
Confidence 34445999999999999987764 66 49999998864
No 190
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=95.10 E-value=0.095 Score=45.54 Aligned_cols=164 Identities=16% Similarity=0.164 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCC--CeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCcccCCCCccHHHHHHHHHH
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGL--PCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPAVGVEPSHPIFVVLAPIVS 89 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~--p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~~~~~~~~~~~~~~~~~~~ 89 (221)
+-+...+|..++.+.+.++.=.. .+.+.|-|=||+++-.++ ++|+ .+.++|.--|.+.+.+.+.+. .-+.++.
T Consensus 476 nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPe---lfgA~v~evPllDMlRYh~l~-aG~sW~~ 551 (648)
T COG1505 476 NKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPE---LFGAAVCEVPLLDMLRYHLLT-AGSSWIA 551 (648)
T ss_pred cchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChh---hhCceeeccchhhhhhhcccc-cchhhHh
Confidence 34667888888888888764333 488999999999986554 4554 577777767765543322110 0000000
Q ss_pred hhcCCCccccccCCCCCCCCCHHHHHHHhCCCCCcCCCcchhHHHHHHHHHHHHHHhCC--CCCCcEEEeecCCCcccCh
Q 045548 90 FLLPRYQISAANKNGMPVSRDPEALVAKYTDPLVYTGSIRVRTGYEILRITTYLQRNLN--RLKVPFLLLHGTADTVTDP 167 (221)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~P~Lii~G~~D~iv~~ 167 (221)
.+ .-..+|+.... +.++.. .++++ +.--|+||-.|.+|.=|.|
T Consensus 552 ----EY----------G~Pd~P~d~~~-------------------l~~YSP--y~nl~~g~kYP~~LITTs~~DDRVHP 596 (648)
T COG1505 552 ----EY----------GNPDDPEDRAF-------------------LLAYSP--YHNLKPGQKYPPTLITTSLHDDRVHP 596 (648)
T ss_pred ----hc----------CCCCCHHHHHH-------------------HHhcCc--hhcCCccccCCCeEEEcccccccccc
Confidence 00 00112221111 000000 12222 2236899999999988888
Q ss_pred HHHHHHHHHcCCCCceEEEcC--CcccccCCCCC-hHHHHHHHHHHHHHhh
Q 045548 168 EASKKLHKYASSADKTMKLYQ--GFLHDLLFEPE-RDDIVKDIIDWLCCRV 215 (221)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~--~~~H~i~~e~~-~~~v~~~i~~fl~~~~ 215 (221)
..++.|+.++.........++ ++||.---+.. -.+....+..||.+.+
T Consensus 597 aHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 597 AHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred hHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 888888777643333444443 58997644322 2344556677887654
No 191
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=95.08 E-value=0.04 Score=43.08 Aligned_cols=39 Identities=18% Similarity=0.235 Sum_probs=29.6
Q ss_pred CeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccC
Q 045548 36 PCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGV 74 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~ 74 (221)
.+.++|||.||-.|.++|+.-...-.+.++|.+.|..+.
T Consensus 121 klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 121 KLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred eEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 699999999999999887621122368888888887554
No 192
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=94.86 E-value=0.017 Score=46.13 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=26.3
Q ss_pred CCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 35 LPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 35 ~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
..+.++|||+||+.++....+. .++++.|+...|
T Consensus 241 s~~aViGHSFGgAT~i~~ss~~---t~FrcaI~lD~W 274 (399)
T KOG3847|consen 241 SQAAVIGHSFGGATSIASSSSH---TDFRCAIALDAW 274 (399)
T ss_pred hhhhheeccccchhhhhhhccc---cceeeeeeeeee
Confidence 3589999999999998765432 268988888765
No 193
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.65 E-value=0.11 Score=42.57 Aligned_cols=40 Identities=33% Similarity=0.388 Sum_probs=28.5
Q ss_pred CCCCeEEEecchhHHHHHHHhcC---CCCCCCccEEEEeCCcc
Q 045548 33 PGLPCFCFGHSTGAAIVLKAVLD---PKFEANVAGVVLTSPAV 72 (221)
Q Consensus 33 ~~~p~~l~GhSmGG~ia~~~a~~---~~~~~~i~~lil~sp~~ 72 (221)
.+.|+.|+|||||+.+....++. .+....|+-++|++.+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 56799999999999999876531 11123478888887543
No 194
>COG0627 Predicted esterase [General function prediction only]
Probab=94.59 E-value=0.058 Score=43.76 Aligned_cols=57 Identities=16% Similarity=0.082 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhcCCC-CCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCcccCC
Q 045548 17 AVKDMKLFVEKVLADNPG-LPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVGVE 75 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~-~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~~~ 75 (221)
+++++...+++......+ ....++||||||-=|+.+|.+. +++++.+.-.||++...
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~--pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKH--PDRFKSASSFSGILSPS 190 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhC--cchhceecccccccccc
Confidence 455666555544332211 1478999999999999988642 24788888888876654
No 195
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.44 E-value=0.1 Score=41.61 Aligned_cols=49 Identities=20% Similarity=0.101 Sum_probs=33.8
Q ss_pred HHHHHHHhcCCCC----CeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCccc
Q 045548 23 LFVEKVLADNPGL----PCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 23 ~~~~~~~~~~~~~----p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~ 73 (221)
+++=.+...+|.. .-+|.|-||||++++.++.+ +++.+..++..||.++
T Consensus 161 eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~--~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 161 ELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLR--HPERFGHVLSQSGSFW 213 (299)
T ss_pred HhhhhhhccCcccccCCCcEEeccccccHHHHHHHhc--CchhhceeeccCCccc
Confidence 3334444445432 36799999999999988763 2347888888888654
No 196
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.44 E-value=0.06 Score=46.32 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=50.8
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCC----------CCceEEEcCCcccccCCC-CChHHHHHHHHHHHHHh
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASS----------ADKTMKLYQGFLHDLLFE-PERDDIVKDIIDWLCCR 214 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~----------~~~~~~~~~~~~H~i~~e-~~~~~v~~~i~~fl~~~ 214 (221)
.--+++.||..|.+||+....++++++.. .-.++...||++|+..-. ...-.++..|.+|.++-
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 46789999999999999999888887632 125778889999987654 34557889999999864
No 197
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=94.43 E-value=0.28 Score=37.43 Aligned_cols=37 Identities=22% Similarity=0.213 Sum_probs=28.7
Q ss_pred EEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCC
Q 045548 155 LLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLF 196 (221)
Q Consensus 155 Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~ 196 (221)
-.+-|++|.|.|++..+++++.. ..+..++ ++|..+.
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~----~~~~~~~-~~Hy~F~ 205 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGR----CTIVEID-APHYPFF 205 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCc----CcEEEec-CCCcCch
Confidence 47899999999999999998753 2455554 7898765
No 198
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=94.03 E-value=0.054 Score=46.78 Aligned_cols=56 Identities=23% Similarity=0.217 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHhc---C--CCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 16 AAVKDMKLFVEKVLAD---N--PGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 16 ~~~~dl~~~~~~~~~~---~--~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
....|....++++++. + ...+|.|+|||.||..+..++..|.....++++|+.|+.
T Consensus 152 ~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~ 212 (493)
T cd00312 152 YGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGS 212 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCC
Confidence 3456777777777653 1 123699999999999998877665434468888888754
No 199
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=94.02 E-value=0.13 Score=44.16 Aligned_cols=62 Identities=11% Similarity=0.006 Sum_probs=46.8
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCC-----------------C----------------CceEEEcCCcccccCCC
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASS-----------------A----------------DKTMKLYQGFLHDLLFE 197 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~-----------------~----------------~~~~~~~~~~~H~i~~e 197 (221)
.+++|+..|+.|-+||.-..+++.+.+.- . ...++.++++||++..+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 58999999999999999888777665530 0 12334556899998776
Q ss_pred CChHHHHHHHHHHHHH
Q 045548 198 PERDDIVKDIIDWLCC 213 (221)
Q Consensus 198 ~~~~~v~~~i~~fl~~ 213 (221)
.++.+.+.+.+|+..
T Consensus 444 -~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 -QPAVALTMINRFLRN 458 (462)
T ss_pred -HHHHHHHHHHHHHcC
Confidence 577888888888864
No 200
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.01 E-value=0.21 Score=40.69 Aligned_cols=58 Identities=28% Similarity=0.371 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHhcCCC---CCeEEEecchhHHHHHHHhc---CCC-----CCCCccEEEEeCCccc
Q 045548 16 AAVKDMKLFVEKVLADNPG---LPCFCFGHSTGAAIVLKAVL---DPK-----FEANVAGVVLTSPAVG 73 (221)
Q Consensus 16 ~~~~dl~~~~~~~~~~~~~---~p~~l~GhSmGG~ia~~~a~---~~~-----~~~~i~~lil~sp~~~ 73 (221)
..++|+..+++.....+|+ .|++|.|-|-||..+-.+|. ..+ ..=.++|+++-+|+..
T Consensus 29 ~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 29 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 97 (319)
T ss_pred HHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCC
Confidence 4558999999998887764 69999999999987765542 111 0115789999888754
No 201
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.79 E-value=0.089 Score=45.63 Aligned_cols=50 Identities=28% Similarity=0.488 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcC--CCCCeEEEecchhHHHHHHHhcC------CC---CCCCccEEEEeCC
Q 045548 21 MKLFVEKVLADN--PGLPCFCFGHSTGAAIVLKAVLD------PK---FEANVAGVVLTSP 70 (221)
Q Consensus 21 l~~~~~~~~~~~--~~~p~~l~GhSmGG~ia~~~a~~------~~---~~~~i~~lil~sp 70 (221)
..++++++..-. .+.||+-+||||||+++=.++++ |. .....+|+|+.+-
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~ 570 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSV 570 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEec
Confidence 334555544422 26899999999999998765432 21 1124577777653
No 202
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=93.59 E-value=0.23 Score=38.61 Aligned_cols=34 Identities=32% Similarity=0.363 Sum_probs=23.7
Q ss_pred CCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeC
Q 045548 34 GLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTS 69 (221)
Q Consensus 34 ~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~s 69 (221)
..|++-+|||||+.+-+.+.... ...-+|-|++|
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~--~~~r~gniliS 122 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLF--DVERAGNILIS 122 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhc--cCcccceEEEe
Confidence 36999999999999987664321 11336667766
No 203
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=93.26 E-value=0.32 Score=40.81 Aligned_cols=64 Identities=23% Similarity=0.355 Sum_probs=47.9
Q ss_pred ccCCHHHHHHHHHHHHHHHHhcCC---CCCeEEEecchhHHHHHHHhc----CCC----CCCCccEEEEeCCccc
Q 045548 10 YVHSLDAAVKDMKLFVEKVLADNP---GLPCFCFGHSTGAAIVLKAVL----DPK----FEANVAGVVLTSPAVG 73 (221)
Q Consensus 10 ~~~~~~~~~~dl~~~~~~~~~~~~---~~p~~l~GhSmGG~ia~~~a~----~~~----~~~~i~~lil~sp~~~ 73 (221)
+..+.++.++|+..|++....++| +.|++|.|-|.||..+-.+|. ... ..-.++|+++.+|++.
T Consensus 108 ~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 108 YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWID 182 (415)
T ss_dssp GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SB
T ss_pred ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccc
Confidence 445789999999999999998877 359999999999998765542 111 0235899999998764
No 204
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=93.24 E-value=0.1 Score=43.79 Aligned_cols=60 Identities=12% Similarity=0.151 Sum_probs=41.8
Q ss_pred CcEEEeecCCCcccChHHHHHHHHHcCCC------------------------CceEEEcCCcccccCCCCChHHHHHHH
Q 045548 152 VPFLLLHGTADTVTDPEASKKLHKYASSA------------------------DKTMKLYQGFLHDLLFEPERDDIVKDI 207 (221)
Q Consensus 152 ~P~Lii~G~~D~iv~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~H~i~~e~~~~~v~~~i 207 (221)
+++|+.+|+.|-+||.-..+.+.+++.-. +-++.++.++||++..+ .++...+-+
T Consensus 331 irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~d-qP~~a~~m~ 409 (415)
T PF00450_consen 331 IRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQD-QPEAALQMF 409 (415)
T ss_dssp -EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHH-SHHHHHHHH
T ss_pred ceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhh-CHHHHHHHH
Confidence 89999999999999999999887765421 12356678999998876 467777777
Q ss_pred HHHHH
Q 045548 208 IDWLC 212 (221)
Q Consensus 208 ~~fl~ 212 (221)
.+||.
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 77874
No 205
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=92.97 E-value=0.46 Score=38.60 Aligned_cols=53 Identities=15% Similarity=0.166 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 17 AVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
+..-+.+.+..+.. ++...++|+||++|+..++++..... ...++++|+++|.
T Consensus 176 ~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~-~~~~daLV~I~a~ 228 (310)
T PF12048_consen 176 LFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKP-PPMPDALVLINAY 228 (310)
T ss_pred HHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCC-CcccCeEEEEeCC
Confidence 34445555555443 44555999999999999999864321 2358999999873
No 206
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=92.29 E-value=0.57 Score=39.90 Aligned_cols=61 Identities=11% Similarity=0.068 Sum_probs=45.7
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCCC----------------------C-ceEEEcCCcccccCCCCChHHHHHHH
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASSA----------------------D-KTMKLYQGFLHDLLFEPERDDIVKDI 207 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~----------------------~-~~~~~~~~~~H~i~~e~~~~~v~~~i 207 (221)
++++||..|+.|.+||.-..+.+.+.+.-. + -++.++.++||++. . .+++..+-+
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~-qP~~al~m~ 424 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y-RPNETFIMF 424 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-C-CHHHHHHHH
Confidence 589999999999999999888887665310 1 23445568999995 3 577777777
Q ss_pred HHHHHH
Q 045548 208 IDWLCC 213 (221)
Q Consensus 208 ~~fl~~ 213 (221)
.+|+..
T Consensus 425 ~~Fi~~ 430 (433)
T PLN03016 425 QRWISG 430 (433)
T ss_pred HHHHcC
Confidence 888864
No 207
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=92.28 E-value=0.6 Score=39.87 Aligned_cols=62 Identities=18% Similarity=0.163 Sum_probs=45.5
Q ss_pred CCHHHHHHHHHHHHHHHHhcCC---CCCeEEEecchhHHHHHHHhc---CCC-----CCCCccEEEEeCCccc
Q 045548 12 HSLDAAVKDMKLFVEKVLADNP---GLPCFCFGHSTGAAIVLKAVL---DPK-----FEANVAGVVLTSPAVG 73 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~---~~p~~l~GhSmGG~ia~~~a~---~~~-----~~~~i~~lil~sp~~~ 73 (221)
.+-+..++|...|++....++| +.+++|.|-|-+|..+-.+|+ +.+ ..=.++|+++-+|...
T Consensus 142 ~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 142 TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTD 214 (454)
T ss_pred CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccC
Confidence 3456788999999998888777 469999999999977655542 111 1125899998887654
No 208
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=92.22 E-value=0.25 Score=42.85 Aligned_cols=57 Identities=26% Similarity=0.290 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHhcCC---C--CCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCc
Q 045548 15 DAAVKDMKLFVEKVLADNP---G--LPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~~---~--~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~ 71 (221)
.....|....++++++... + ..|.|+|||.||..+...+..|.....++++|+.|+.
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 3456788888888887421 1 2599999999999998776655434579999998863
No 209
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=92.11 E-value=4.2 Score=36.20 Aligned_cols=53 Identities=17% Similarity=0.286 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhcCCCC--CeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCccc
Q 045548 18 VKDMKLFVEKVLADNPGL--PCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 18 ~~dl~~~~~~~~~~~~~~--p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~~~ 73 (221)
..|..+..+++.++.-.. .++++|-|.||++.-..+ +.|+ .++|+|+-.|...
T Consensus 508 f~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~---lf~~iiA~VPFVD 563 (682)
T COG1770 508 FTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD---LFAGIIAQVPFVD 563 (682)
T ss_pred HHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh---hhhheeecCCccc
Confidence 456666667766654332 599999999999988776 3454 7899998888654
No 210
>PLN02209 serine carboxypeptidase
Probab=92.06 E-value=0.61 Score=39.77 Aligned_cols=61 Identities=15% Similarity=0.107 Sum_probs=45.8
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCCC----------------------C-ceEEEcCCcccccCCCCChHHHHHHH
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASSA----------------------D-KTMKLYQGFLHDLLFEPERDDIVKDI 207 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~----------------------~-~~~~~~~~~~H~i~~e~~~~~v~~~i 207 (221)
.+++|+..|+.|-+||.-..+.+.+.+.-. + -++.++.|+||++. . .+++..+-+
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~-qP~~al~m~ 428 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-Y-LPEESSIMF 428 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-c-CHHHHHHHH
Confidence 589999999999999998888887665410 1 23445578999984 3 678888888
Q ss_pred HHHHHH
Q 045548 208 IDWLCC 213 (221)
Q Consensus 208 ~~fl~~ 213 (221)
.+|+..
T Consensus 429 ~~fi~~ 434 (437)
T PLN02209 429 QRWISG 434 (437)
T ss_pred HHHHcC
Confidence 888853
No 211
>PLN02633 palmitoyl protein thioesterase family protein
Probab=92.00 E-value=0.78 Score=36.98 Aligned_cols=61 Identities=16% Similarity=0.147 Sum_probs=38.1
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCC--CCeEEEecchhHHHHHHHhcC-CCCCCCccEEEEeC-Cccc
Q 045548 8 HAYVHSLDAAVKDMKLFVEKVLADNPG--LPCFCFGHSTGAAIVLKAVLD-PKFEANVAGVVLTS-PAVG 73 (221)
Q Consensus 8 ~g~~~~~~~~~~dl~~~~~~~~~~~~~--~p~~l~GhSmGG~ia~~~a~~-~~~~~~i~~lil~s-p~~~ 73 (221)
.+++..+. +.+..+++++.. .+. .-+.++|||-||+++-.+++. ++. ..++-+|-.+ |-.+
T Consensus 69 ~s~~~~~~---~Qve~vce~l~~-~~~l~~G~naIGfSQGGlflRa~ierc~~~-p~V~nlISlggph~G 133 (314)
T PLN02633 69 DSWLMPLT---QQAEIACEKVKQ-MKELSQGYNIVGRSQGNLVARGLIEFCDGG-PPVYNYISLAGPHAG 133 (314)
T ss_pred ccceeCHH---HHHHHHHHHHhh-chhhhCcEEEEEEccchHHHHHHHHHCCCC-CCcceEEEecCCCCC
Confidence 34444443 455555555554 222 149999999999999888763 321 2699998765 4433
No 212
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=91.99 E-value=0.2 Score=41.45 Aligned_cols=31 Identities=23% Similarity=0.247 Sum_probs=22.9
Q ss_pred CeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCC
Q 045548 36 PCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSP 70 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp 70 (221)
+|.++|+||||..++.++ +++ +|++.|.++-
T Consensus 227 RIG~~GfSmGg~~a~~LaALDd----RIka~v~~~~ 258 (390)
T PF12715_consen 227 RIGCMGFSMGGYRAWWLAALDD----RIKATVANGY 258 (390)
T ss_dssp EEEEEEEGGGHHHHHHHHHH-T----T--EEEEES-
T ss_pred ceEEEeecccHHHHHHHHHcch----hhHhHhhhhh
Confidence 699999999999999775 564 7988887764
No 213
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=91.84 E-value=0.27 Score=41.87 Aligned_cols=57 Identities=25% Similarity=0.227 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHhc---CCC--CCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCccc
Q 045548 17 AVKDMKLFVEKVLAD---NPG--LPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~---~~~--~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~ 73 (221)
...|....++++.+. +.+ .-|.|+|+|.||..++.++..|....-++++|+.||...
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 566777778887763 111 139999999999999987666765556788888887654
No 214
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.38 E-value=6.1 Score=31.33 Aligned_cols=58 Identities=12% Similarity=0.100 Sum_probs=39.4
Q ss_pred EEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHh
Q 045548 154 FLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 154 ~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~ 214 (221)
+.++.+++|.-+|-.....+-+.-|. +++.+++ +||...+=...+...+.|.+-|++.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg--~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPG--CEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCC--CEEEEee-cCceeeeehhchHHHHHHHHHHHhh
Confidence 46778999999998777665444454 5788888 7896544333455666677766655
No 215
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.26 E-value=0.55 Score=36.25 Aligned_cols=40 Identities=25% Similarity=0.457 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a 53 (221)
.|++..++.+.+.++.... .+.|++++|+|.|+.++...+
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~--~~~~vvV~GySQGA~Va~~~~ 66 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIA--AGGPVVVFGYSQGAVVASNVL 66 (225)
T ss_pred hHHHHHHHHHHHHHHhhcc--CCCCEEEEEECHHHHHHHHHH
Confidence 4555556666666655332 456899999999999998754
No 216
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.53 E-value=0.82 Score=37.00 Aligned_cols=68 Identities=22% Similarity=0.379 Sum_probs=51.8
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHhcCC---CCCeEEEecchhHHHHHHHhc-------CCCCCCCccEEEEeCCccc
Q 045548 6 GLHAYVHSLDAAVKDMKLFVEKVLADNP---GLPCFCFGHSTGAAIVLKAVL-------DPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 6 ~~~g~~~~~~~~~~dl~~~~~~~~~~~~---~~p~~l~GhSmGG~ia~~~a~-------~~~~~~~i~~lil~sp~~~ 73 (221)
|..-|..+..+.+.|+.++++.+...+| ..|++++.-|-||-++..+++ +......+.+|+|-.+|+.
T Consensus 90 g~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 90 GSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred CcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 4445666788899999999999987665 469999999999999987653 1222346788999877754
No 217
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=89.39 E-value=1.5 Score=35.18 Aligned_cols=50 Identities=16% Similarity=0.249 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhcCC--CCCeEEEecchhHHHHHHHhcC-CCCCCCccEEEEeCC
Q 045548 18 VKDMKLFVEKVLADNP--GLPCFCFGHSTGAAIVLKAVLD-PKFEANVAGVVLTSP 70 (221)
Q Consensus 18 ~~dl~~~~~~~~~~~~--~~p~~l~GhSmGG~ia~~~a~~-~~~~~~i~~lil~sp 70 (221)
+.++.++++.+..++. ..+||+.|-|-||..+.+++.. | +.+.++..++.
T Consensus 125 Vgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p---~~faa~A~VAg 177 (312)
T COG3509 125 VGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYP---DIFAAIAPVAG 177 (312)
T ss_pred HHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCc---ccccceeeeec
Confidence 4556677777776653 2379999999999999999863 4 36788766654
No 218
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=87.81 E-value=1.8 Score=34.55 Aligned_cols=52 Identities=17% Similarity=0.259 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhcCCC--CCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeC-Cccc
Q 045548 19 KDMKLFVEKVLADNPG--LPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTS-PAVG 73 (221)
Q Consensus 19 ~dl~~~~~~~~~~~~~--~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~s-p~~~ 73 (221)
+.+..+++.+.. .|+ .-+.++|+|-||++.-.+++ .++ ..|+-+|-.+ |-.+
T Consensus 63 ~Qv~~vc~~l~~-~p~L~~G~~~IGfSQGgl~lRa~vq~c~~--~~V~nlISlggph~G 118 (279)
T PF02089_consen 63 DQVEQVCEQLAN-DPELANGFNAIGFSQGGLFLRAYVQRCND--PPVHNLISLGGPHMG 118 (279)
T ss_dssp HHHHHHHHHHHH--GGGTT-EEEEEETCHHHHHHHHHHH-TS--S-EEEEEEES--TT-
T ss_pred HHHHHHHHHHhh-ChhhhcceeeeeeccccHHHHHHHHHCCC--CCceeEEEecCcccc
Confidence 344555555543 221 24999999999999988876 333 2699998765 5433
No 219
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=87.16 E-value=0.8 Score=37.78 Aligned_cols=48 Identities=17% Similarity=0.312 Sum_probs=42.5
Q ss_pred CCCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCC
Q 045548 148 NRLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLF 196 (221)
Q Consensus 148 ~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~ 196 (221)
.++.+|-.|+.|..|...++.++.-+++.+|. .|-+...|++.|.+-+
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~n 373 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLIN 373 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhhH
Confidence 57899999999999999999999999999987 5889999999997633
No 220
>PLN02606 palmitoyl-protein thioesterase
Probab=87.05 E-value=3 Score=33.66 Aligned_cols=57 Identities=16% Similarity=0.084 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCC--CeEEEecchhHHHHHHHhcC-CCCCCCccEEEEeC-Cccc
Q 045548 15 DAAVKDMKLFVEKVLADNPGL--PCFCFGHSTGAAIVLKAVLD-PKFEANVAGVVLTS-PAVG 73 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~~~~--p~~l~GhSmGG~ia~~~a~~-~~~~~~i~~lil~s-p~~~ 73 (221)
..+-+.+..+++++.. .+.+ -+.++|+|-||+++-.+++. |+. ..++-+|-.+ |-.+
T Consensus 74 ~~~~~Qv~~vce~l~~-~~~L~~G~naIGfSQGglflRa~ierc~~~-p~V~nlISlggph~G 134 (306)
T PLN02606 74 MPLRQQASIACEKIKQ-MKELSEGYNIVAESQGNLVARGLIEFCDNA-PPVINYVSLGGPHAG 134 (306)
T ss_pred cCHHHHHHHHHHHHhc-chhhcCceEEEEEcchhHHHHHHHHHCCCC-CCcceEEEecCCcCC
Confidence 4445667777777765 3322 49999999999999888763 431 2699998765 4433
No 221
>COG3150 Predicted esterase [General function prediction only]
Probab=86.86 E-value=1.1 Score=32.88 Aligned_cols=58 Identities=17% Similarity=0.132 Sum_probs=36.8
Q ss_pred CCCCCCc-EEEeecCC-CcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHH
Q 045548 147 LNRLKVP-FLLLHGTA-DTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLC 212 (221)
Q Consensus 147 ~~~i~~P-~Lii~G~~-D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~ 212 (221)
+..++.| .+.+.... |.+.+.+.+...+.. ....+++|..|.+ . .-+.-++.|+.|+.
T Consensus 128 ~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~-----~~~~V~dgg~H~F-~--~f~~~l~~i~aF~g 187 (191)
T COG3150 128 FRELNRPRCLVLLSQTGDEVLDYRQAVAYYHP-----CYEIVWDGGDHKF-K--GFSRHLQRIKAFKG 187 (191)
T ss_pred ccccCCCcEEEeecccccHHHHHHHHHHHhhh-----hhheeecCCCccc-c--chHHhHHHHHHHhc
Confidence 3344433 25555655 999998876655533 3566778888854 2 34667788888865
No 222
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=86.28 E-value=2.5 Score=35.44 Aligned_cols=51 Identities=24% Similarity=0.233 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhcCC----CCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcc
Q 045548 19 KDMKLFVEKVLADNP----GLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAV 72 (221)
Q Consensus 19 ~dl~~~~~~~~~~~~----~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~ 72 (221)
-|+..++..+.+..+ ++|++++|+|-||-+|...|. -|. .++++|=.|.+.
T Consensus 164 iD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~---~~~~~iDns~~~ 219 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPW---LFDGVIDNSSYA 219 (403)
T ss_pred HHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCcc---ceeEEEecCccc
Confidence 355555555555433 369999999999999998775 454 588888777653
No 223
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=85.03 E-value=3.7 Score=35.26 Aligned_cols=56 Identities=21% Similarity=0.179 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHHHHHHhcCC---CCCeEEEecchhHHHHHHHh-cCCCCCCCccEEEEeCCc
Q 045548 13 SLDAAVKDMKLFVEKVLADNP---GLPCFCFGHSTGAAIVLKAV-LDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~---~~p~~l~GhSmGG~ia~~~a-~~~~~~~~i~~lil~sp~ 71 (221)
|.++...|++.||+++..+++ +.|.+.+|-|--|.++..+- .+|+ .+-|.|..|.+
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe---l~~GsvASSap 206 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE---LTVGSVASSAP 206 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch---hheeecccccc
Confidence 567888999999999998764 23899999999999998663 3564 57777766543
No 224
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=84.36 E-value=0.44 Score=41.74 Aligned_cols=51 Identities=29% Similarity=0.255 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhcCC-----CCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCC
Q 045548 20 DMKLFVEKVLADNP-----GLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSP 70 (221)
Q Consensus 20 dl~~~~~~~~~~~~-----~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp 70 (221)
|....+++++...+ -.+|.|+|||.||..+..+...|.....+.++|..|.
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSG 230 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcc
Confidence 77777777776421 2369999999999999888777654445666666553
No 225
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=83.62 E-value=2 Score=36.65 Aligned_cols=58 Identities=28% Similarity=0.371 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHhcCCC---CCeEEEecchhHHHHHHHhc---CCC-----CCCCccEEEEeCCccc
Q 045548 16 AAVKDMKLFVEKVLADNPG---LPCFCFGHSTGAAIVLKAVL---DPK-----FEANVAGVVLTSPAVG 73 (221)
Q Consensus 16 ~~~~dl~~~~~~~~~~~~~---~p~~l~GhSmGG~ia~~~a~---~~~-----~~~~i~~lil~sp~~~ 73 (221)
..++|+..|++.....+|+ .|++|.|.|.||..+-.+|. ..+ ..=.++|+++-+|+..
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcC
Confidence 3447888888888776664 69999999999987665542 111 1125889999888653
No 226
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.51 E-value=3.6 Score=31.48 Aligned_cols=38 Identities=29% Similarity=0.408 Sum_probs=29.1
Q ss_pred CeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCccc
Q 045548 36 PCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~ 73 (221)
.++++.||-||...+.+.......++|-++.|...+.+
T Consensus 191 sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 191 SVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred eEEEEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 49999999999999988753222368999999865544
No 227
>PLN02209 serine carboxypeptidase
Probab=83.21 E-value=2.4 Score=36.28 Aligned_cols=59 Identities=29% Similarity=0.401 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHhcCCC---CCeEEEecchhHHHHHHHhc---CCC-----CCCCccEEEEeCCccc
Q 045548 15 DAAVKDMKLFVEKVLADNPG---LPCFCFGHSTGAAIVLKAVL---DPK-----FEANVAGVVLTSPAVG 73 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~~~---~p~~l~GhSmGG~ia~~~a~---~~~-----~~~~i~~lil~sp~~~ 73 (221)
++.++|+..|++.....+|+ .|++|.|.|.||..+-.+|. ..+ ..=.++|+++.+|+..
T Consensus 144 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 144 TSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 45568999999998887764 59999999999987655442 111 1125789999888754
No 228
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=82.99 E-value=1.8 Score=34.73 Aligned_cols=65 Identities=20% Similarity=0.261 Sum_probs=51.8
Q ss_pred CCcEEEeecCCCcccC---hHHHHHHHHHcCCCCceEEEcCCcccccCCC-C-ChHHHHHHHHHHHHHhh
Q 045548 151 KVPFLLLHGTADTVTD---PEASKKLHKYASSADKTMKLYQGFLHDLLFE-P-ERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~---~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e-~-~~~~v~~~i~~fl~~~~ 215 (221)
++-++-+-|+.|.|.- .+++..+...++...++...-++.||...+. . =++++...|.+|+.+.-
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d 408 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYD 408 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhC
Confidence 5788999999998776 4677888888876667778889999965554 2 36889999999998764
No 229
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=81.57 E-value=4.3 Score=33.10 Aligned_cols=61 Identities=11% Similarity=0.068 Sum_probs=45.2
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCCC----------------------C-ceEEEcCCcccccCCCCChHHHHHHH
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASSA----------------------D-KTMKLYQGFLHDLLFEPERDDIVKDI 207 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~----------------------~-~~~~~~~~~~H~i~~e~~~~~v~~~i 207 (221)
++++||..|+.|.+||.-..+.+.+.+.-. + -++.++.|+||++. . .++....-+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~-qP~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y-RPNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-c-CHHHHHHHH
Confidence 589999999999999998888887766410 1 23344558999995 3 577777777
Q ss_pred HHHHHH
Q 045548 208 IDWLCC 213 (221)
Q Consensus 208 ~~fl~~ 213 (221)
.+|+..
T Consensus 311 ~~fi~~ 316 (319)
T PLN02213 311 QRWISG 316 (319)
T ss_pred HHHHcC
Confidence 778754
No 230
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=80.92 E-value=2.7 Score=33.23 Aligned_cols=45 Identities=18% Similarity=0.310 Sum_probs=31.0
Q ss_pred hCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCCC---ceEEEcCCccc
Q 045548 146 NLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSAD---KTMKLYQGFLH 192 (221)
Q Consensus 146 ~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~---~~~~~~~~~~H 192 (221)
.+.++++|+|++.|-.|.... ..+.+.++.+.... +++++-| ..|
T Consensus 223 ~~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigp-w~H 270 (272)
T PF02129_consen 223 RLDKIDVPVLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGP-WTH 270 (272)
T ss_dssp HHGG--SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEES-EST
T ss_pred HHhhCCCCEEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeC-CCC
Confidence 457899999999999997777 66666788876554 2666655 345
No 231
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=80.41 E-value=5.5 Score=31.55 Aligned_cols=58 Identities=21% Similarity=0.240 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCC--CeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeC-CcccC
Q 045548 14 LDAAVKDMKLFVEKVLADNPGL--PCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTS-PAVGV 74 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~~~~--p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~s-p~~~~ 74 (221)
+.-+-+.+..++++++. .++. -+.++|.|-||+++-++++ -++ ..++.+|-++ |-.++
T Consensus 70 l~pl~~Qv~~~ce~v~~-m~~lsqGynivg~SQGglv~Raliq~cd~--ppV~n~ISL~gPhaG~ 131 (296)
T KOG2541|consen 70 LMPLWEQVDVACEKVKQ-MPELSQGYNIVGYSQGGLVARALIQFCDN--PPVKNFISLGGPHAGI 131 (296)
T ss_pred hccHHHHHHHHHHHHhc-chhccCceEEEEEccccHHHHHHHHhCCC--CCcceeEeccCCcCCc
Confidence 44566777888888873 3333 3999999999999988876 233 2578887654 65444
No 232
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=78.90 E-value=2.5 Score=35.43 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHH
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKA 52 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~ 52 (221)
+-+...+|+..+++....+....++.|+|.|.|+=+--..
T Consensus 304 tPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~ 343 (456)
T COG3946 304 TPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFA 343 (456)
T ss_pred CHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHH
Confidence 3567889999999999998888899999999999886543
No 233
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=74.24 E-value=4.4 Score=32.29 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=26.5
Q ss_pred CeEEEecchhHHHHHHHhcC-CCCCCCccEEEEeCCcc
Q 045548 36 PCFCFGHSTGAAIVLKAVLD-PKFEANVAGVVLTSPAV 72 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~~-~~~~~~i~~lil~sp~~ 72 (221)
+++|+|.|+|+.-+..+-.. .+..++++|+++.+|..
T Consensus 110 kL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred eEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 39999999999887654221 12234799999998753
No 234
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=70.49 E-value=20 Score=29.69 Aligned_cols=67 Identities=15% Similarity=0.128 Sum_probs=51.3
Q ss_pred CCCCcEEEeecCCCcccChHHHHHHHHHcCC--CCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhh
Q 045548 149 RLKVPFLLLHGTADTVTDPEASKKLHKYASS--ADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 149 ~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~--~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
....+.|.+.+..|.++|.+..+++.+.... ...+..-+.++.|..++...+....+...+|+.+..
T Consensus 223 ~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 223 ELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred cccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcc
Confidence 3466778888999999999998888444322 234445567788988887778889999999999875
No 235
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=70.09 E-value=7.2 Score=33.76 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=30.8
Q ss_pred CeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccC
Q 045548 36 PCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGV 74 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~ 74 (221)
.-|..|-|-||.-++..|+ +| +-++|+|..+|+.+.
T Consensus 116 ~sY~~GcS~GGRqgl~~AQryP---~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 116 YSYFSGCSTGGRQGLMAAQRYP---EDFDGILAGAPAINW 152 (474)
T ss_pred ceEEEEeCCCcchHHHHHHhCh---hhcCeEEeCCchHHH
Confidence 4789999999999999987 45 479999999998653
No 236
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=66.64 E-value=30 Score=29.86 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=46.8
Q ss_pred HHhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCC-----------------------CceEEEcCCcccccCCCCCh
Q 045548 144 QRNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSA-----------------------DKTMKLYQGFLHDLLFEPER 200 (221)
Q Consensus 144 ~~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~H~i~~e~~~ 200 (221)
.+.+..-..++||..|+.|.+||.-..+.+.+.+.-. +..+..+.|+||++..++ +
T Consensus 356 ~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~-p 434 (454)
T KOG1282|consen 356 KKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDK-P 434 (454)
T ss_pred HHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCC-c
Confidence 3333333489999999999999998877765443210 122356679999988764 4
Q ss_pred HHHHHHHHHHHHHh
Q 045548 201 DDIVKDIIDWLCCR 214 (221)
Q Consensus 201 ~~v~~~i~~fl~~~ 214 (221)
++...-+.+||...
T Consensus 435 ~~al~m~~~fl~g~ 448 (454)
T KOG1282|consen 435 ESALIMFQRFLNGQ 448 (454)
T ss_pred HHHHHHHHHHHcCC
Confidence 55556677787653
No 237
>COG5023 Tubulin [Cytoskeleton]
Probab=66.47 E-value=7.8 Score=32.15 Aligned_cols=43 Identities=16% Similarity=0.151 Sum_probs=33.6
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHH
Q 045548 7 LHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIV 49 (221)
Q Consensus 7 ~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia 49 (221)
.+||..--.++++|+-+.|+........+.-+++=||+||...
T Consensus 102 A~GhYtvG~e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTG 144 (443)
T COG5023 102 ARGHYTVGKEIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTG 144 (443)
T ss_pred cccccchhHHHHHHHHHHHHHHhhcCccccceeeeeeccCcCc
Confidence 3676544567888988888888777777778999999998764
No 238
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=61.45 E-value=28 Score=30.39 Aligned_cols=39 Identities=23% Similarity=0.342 Sum_probs=27.7
Q ss_pred CCCCeEEEecchhHHHHHHHhc---CCCCCCCccEEEEeCCc
Q 045548 33 PGLPCFCFGHSTGAAIVLKAVL---DPKFEANVAGVVLTSPA 71 (221)
Q Consensus 33 ~~~p~~l~GhSmGG~ia~~~a~---~~~~~~~i~~lil~sp~ 71 (221)
...||.|+|+|+|+-+.....+ ...-.+-|..++|.+.+
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaP 486 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAP 486 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCC
Confidence 4679999999999999875432 22223468889887643
No 239
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=59.47 E-value=21 Score=31.60 Aligned_cols=68 Identities=19% Similarity=0.052 Sum_probs=42.8
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHh-cCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCccc
Q 045548 2 GGSDGLHAYVHSLDAAVKDMKLFVEKVLA-DNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 2 G~S~~~~g~~~~~~~~~~dl~~~~~~~~~-~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~ 73 (221)
|.|+|...-..+ +-++|-.+.|+++.+ ..-+-.|..+|-|.+|...+.+|..+. ..+++++-.++...
T Consensus 92 ~~SeG~~~~~~~--~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~p--PaLkai~p~~~~~D 160 (563)
T COG2936 92 GGSEGVFDPESS--REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQP--PALKAIAPTEGLVD 160 (563)
T ss_pred ccCCcccceecc--ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCC--chheeecccccccc
Confidence 567774322223 245555556666554 233557999999999999988765321 25788877665443
No 240
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=58.79 E-value=16 Score=29.25 Aligned_cols=19 Identities=21% Similarity=0.151 Sum_probs=16.1
Q ss_pred CCeEEEecchhHHHHHHHh
Q 045548 35 LPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 35 ~p~~l~GhSmGG~ia~~~a 53 (221)
.|..++|||+|=..|+.++
T Consensus 76 ~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred CCcEEeecCHHHHHHHHHh
Confidence 5899999999998887654
No 241
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=58.77 E-value=14 Score=30.12 Aligned_cols=21 Identities=38% Similarity=0.388 Sum_probs=17.0
Q ss_pred CCCCeEEEecchhHHHHHHHh
Q 045548 33 PGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 33 ~~~p~~l~GhSmGG~ia~~~a 53 (221)
...|.++.|||+|=.-|+..+
T Consensus 83 ~~~p~~~aGHSlGEysAl~~a 103 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAA 103 (310)
T ss_pred CCCCceeecccHhHHHHHHHc
Confidence 456889999999988887654
No 242
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=55.35 E-value=19 Score=28.50 Aligned_cols=19 Identities=42% Similarity=0.501 Sum_probs=15.7
Q ss_pred CCeEEEecchhHHHHHHHh
Q 045548 35 LPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 35 ~p~~l~GhSmGG~ia~~~a 53 (221)
.|-.++|||+|=..|+.++
T Consensus 83 ~p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAA 101 (290)
T ss_pred CCCEEeecCHHHHHHHHHh
Confidence 4889999999998876654
No 243
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=55.30 E-value=3.2 Score=34.71 Aligned_cols=16 Identities=25% Similarity=0.275 Sum_probs=13.9
Q ss_pred CeEEEecchhHHHHHH
Q 045548 36 PCFCFGHSTGAAIVLK 51 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~ 51 (221)
.+..+|||+||+++..
T Consensus 151 kISfvghSLGGLvar~ 166 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARY 166 (405)
T ss_pred eeeeeeeecCCeeeeE
Confidence 5899999999999854
No 244
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=54.89 E-value=6.1 Score=31.09 Aligned_cols=12 Identities=33% Similarity=0.656 Sum_probs=10.6
Q ss_pred CeEEEecchhHH
Q 045548 36 PCFCFGHSTGAA 47 (221)
Q Consensus 36 p~~l~GhSmGG~ 47 (221)
.|+++|||+|..
T Consensus 236 ~I~i~GhSl~~~ 247 (270)
T PF14253_consen 236 EIIIYGHSLGEV 247 (270)
T ss_pred EEEEEeCCCchh
Confidence 599999999975
No 245
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=52.57 E-value=9.8 Score=30.87 Aligned_cols=19 Identities=37% Similarity=0.405 Sum_probs=15.6
Q ss_pred CCeEEEecchhHHHHHHHh
Q 045548 35 LPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 35 ~p~~l~GhSmGG~ia~~~a 53 (221)
.|-+++|||+|=..|+.++
T Consensus 84 ~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 84 KPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp CESEEEESTTHHHHHHHHT
T ss_pred ccceeeccchhhHHHHHHC
Confidence 4789999999988887543
No 246
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=51.53 E-value=34 Score=33.49 Aligned_cols=47 Identities=17% Similarity=0.217 Sum_probs=33.7
Q ss_pred HHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeC
Q 045548 22 KLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTS 69 (221)
Q Consensus 22 ~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~s 69 (221)
+-+|+.+++-.|.-|.-++|.|.|+.++..+|. ..+. .....+|+..
T Consensus 2169 ~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~-~~~~~lillD 2216 (2376)
T KOG1202|consen 2169 AYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQ-QSPAPLILLD 2216 (2376)
T ss_pred HHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhh-cCCCcEEEec
Confidence 456788888888899999999999999988762 1111 1234477764
No 247
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=51.51 E-value=38 Score=28.83 Aligned_cols=67 Identities=22% Similarity=0.276 Sum_probs=48.6
Q ss_pred CCCCCC---cccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEE-eCCc
Q 045548 1 HGGSDG---LHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVL-TSPA 71 (221)
Q Consensus 1 hG~S~~---~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil-~sp~ 71 (221)
||.|-+ .+.++ ++.+.++|.+.+++.++.-|++ +=+--|-|=||..++.+-. -+++-+++.|- ++|.
T Consensus 99 F~~SrP~p~DW~~L-ti~QAA~D~Hri~~A~K~iY~~-kWISTG~SKGGmTa~y~rr--FyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 99 FGPSRPEPADWSYL-TIWQAASDQHRIVQAFKPIYPG-KWISTGGSKGGMTAVYYRR--FYPDDVDGTVAYVAPN 169 (448)
T ss_pred ccCCCCCCCCcccc-cHhHhhHHHHHHHHHHHhhccC-CceecCcCCCceeEEEEee--eCCCCCCeeeeeeccc
Confidence 466754 23343 6889999999999999998876 4667799999999964421 13447898875 6774
No 248
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=50.60 E-value=22 Score=27.10 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEecchhHHHH
Q 045548 17 AVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIV 49 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia 49 (221)
+.+++.+.++...........+++-|||||...
T Consensus 106 ~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTG 138 (216)
T PF00091_consen 106 ALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTG 138 (216)
T ss_dssp HHHHHHHHHHHHHHTSTTESEEEEEEESSSSHH
T ss_pred cccccccccchhhccccccccceecccccceec
Confidence 445555666665555567789999999998854
No 249
>PRK03482 phosphoglycerate mutase; Provisional
Probab=50.53 E-value=50 Score=24.94 Aligned_cols=38 Identities=21% Similarity=0.192 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHH
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLK 51 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~ 51 (221)
.|+.++.+-+..+++.+....++..+.+++| ||.+.+.
T Consensus 120 Es~~~~~~Rv~~~l~~~~~~~~~~~vliVsH--g~~i~~l 157 (215)
T PRK03482 120 ESMQELSDRMHAALESCLELPQGSRPLLVSH--GIALGCL 157 (215)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHH
Confidence 4777888888888888766555556899999 5555443
No 250
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=50.38 E-value=13 Score=29.60 Aligned_cols=19 Identities=26% Similarity=0.273 Sum_probs=15.8
Q ss_pred CCeEEEecchhHHHHHHHh
Q 045548 35 LPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 35 ~p~~l~GhSmGG~ia~~~a 53 (221)
.|-+++|||+|-..|+.++
T Consensus 82 ~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 82 RPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred cccEEEecCHHHHHHHHHh
Confidence 4789999999998887654
No 251
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=50.32 E-value=18 Score=32.38 Aligned_cols=54 Identities=17% Similarity=0.179 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHhcCC--CCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCccc
Q 045548 17 AVKDMKLFVEKVLADNP--GLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~--~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~ 73 (221)
-.+|...-.+.+....- .....+.|.|-||+++.+++. +|+ .+.++|+-.|...
T Consensus 529 ~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd---LF~avia~VpfmD 585 (712)
T KOG2237|consen 529 SFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD---LFGAVIAKVPFMD 585 (712)
T ss_pred cHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch---HhhhhhhcCccee
Confidence 34555555555554322 235899999999999987763 454 6888887777544
No 252
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=49.00 E-value=50 Score=29.17 Aligned_cols=46 Identities=20% Similarity=0.259 Sum_probs=28.2
Q ss_pred HhCCCCCCcEEEeecCCCcccChHHHHHHHHHcCCC-CceEEEcCCcccc
Q 045548 145 RNLNRLKVPFLLLHGTADTVTDPEASKKLHKYASSA-DKTMKLYQGFLHD 193 (221)
Q Consensus 145 ~~~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~-~~~~~~~~~~~H~ 193 (221)
+.+.++++|+|++.|=.|. ......+ .++.+.+. .+++++=| ..|.
T Consensus 226 ~~~~~i~vP~l~~~gw~D~-~~~g~~~-~~~~~~~~~~~~lilGp-w~H~ 272 (550)
T TIGR00976 226 RDLGGSDVPTLVTGGWYDN-HSRGSIR-LFLAVHRGGAQRLVVGP-WTHS 272 (550)
T ss_pred hHhcCCCCCEEEeCcccCC-CCchHHH-HHHHHhhcCCceEEEcc-CCCC
Confidence 3567899999999999994 3333333 45554432 34555434 3464
No 253
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=46.59 E-value=27 Score=25.95 Aligned_cols=30 Identities=17% Similarity=0.273 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEec
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGH 42 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~Gh 42 (221)
+.+.+.+-+..|++.++..+|+.|++++-+
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 456677888999999999999999988843
No 254
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=45.91 E-value=17 Score=29.61 Aligned_cols=18 Identities=28% Similarity=0.362 Sum_probs=15.6
Q ss_pred eEEEecchhHHHHHHHhc
Q 045548 37 CFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 37 ~~l~GhSmGG~ia~~~a~ 54 (221)
=++.|-|+||+||+.++.
T Consensus 34 D~i~GTStGgiIA~~la~ 51 (312)
T cd07212 34 DWIAGTSTGGILALALLH 51 (312)
T ss_pred cEEEeeChHHHHHHHHHc
Confidence 369999999999998774
No 255
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=41.80 E-value=46 Score=24.18 Aligned_cols=19 Identities=21% Similarity=0.104 Sum_probs=16.8
Q ss_pred CeEEEecchhHHHHHHHhc
Q 045548 36 PCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~ 54 (221)
+-.+.|-|+|+.++..++.
T Consensus 27 ~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 27 IDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred CCEEEEECHHHHHHHHHHc
Confidence 5689999999999988875
No 256
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=41.09 E-value=55 Score=24.15 Aligned_cols=31 Identities=19% Similarity=0.024 Sum_probs=20.9
Q ss_pred HHHHHHHhcCCCCCeEEEecchhHHHHHHHhc
Q 045548 23 LFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 23 ~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~ 54 (221)
.+++.+.+.. -.+=.+.|-|+||.++..++.
T Consensus 16 Gvl~~L~e~~-~~~d~i~GtSaGai~aa~~a~ 46 (194)
T cd07207 16 GALKALEEAG-ILKKRVAGTSAGAITAALLAL 46 (194)
T ss_pred HHHHHHHHcC-CCcceEEEECHHHHHHHHHHc
Confidence 3444444332 224679999999999988875
No 257
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=40.99 E-value=40 Score=29.78 Aligned_cols=23 Identities=26% Similarity=0.356 Sum_probs=17.5
Q ss_pred cCCCCCeEEEecchhHHHHHHHh
Q 045548 31 DNPGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 31 ~~~~~p~~l~GhSmGG~ia~~~a 53 (221)
...=.|-+++|||||=..++..|
T Consensus 261 ~~GI~Pdav~GHSlGE~aAa~aA 283 (538)
T TIGR02816 261 EFAIKPDFALGYSKGEASMWASL 283 (538)
T ss_pred hcCCCCCEEeecCHHHHHHHHHh
Confidence 33334789999999988887655
No 258
>PF03709 OKR_DC_1_N: Orn/Lys/Arg decarboxylase, N-terminal domain; InterPro: IPR005308 This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure. Ornithine decarboxylase from Lactobacillus 30a (L30a OrnDC, P43099 from SWISSPROT) is representative of the large, pyridoxal-5'-phosphate-dependent decarboxylases that act on lysine, arginine or ornithine. The crystal structure of the L30a OrnDC has been solved to 3.0 A resolution. Six dimers related by C6 symmetry compose the enzymatically active dodecamer (approximately 106 Da). Each monomer of L30a OrnDC can be described in terms of five sequential folding domains. The amino-terminal domain, residues 1 to 107, consists of a five-stranded beta-sheet termed the "wing" domain. Two wing domains of each dimer project inward towards the centre of the dodecamer and contribute to dodecamer stabilisation [].; GO: 0016831 carboxy-lyase activity; PDB: 3Q16_C 3N75_A 1C4K_A 1ORD_A 2VYC_D.
Probab=39.51 E-value=55 Score=22.16 Aligned_cols=27 Identities=19% Similarity=0.431 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEEecch
Q 045548 18 VKDMKLFVEKVLADNPGLPCFCFGHST 44 (221)
Q Consensus 18 ~~dl~~~~~~~~~~~~~~p~~l~GhSm 44 (221)
.+....+++.+.....++|+|+++..-
T Consensus 51 ~~~~~~ll~~i~~~~~~iPVFl~~~~~ 77 (115)
T PF03709_consen 51 EDEAQELLDKIRERNFGIPVFLLAERD 77 (115)
T ss_dssp HHHHHHHHHHHHHHSTT-EEEEEESCC
T ss_pred chhHHHHHHHHHHhCCCCCEEEEecCC
Confidence 355678889998888999999998855
No 259
>PF07578 LAB_N: Lipid A Biosynthesis N-terminal domain; InterPro: IPR011499 This domain is found at the N terminus of a group of Chlamydial lipid A biosynthesis proteins. It is also found by itself in a family of proteins of unknown function.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=39.11 E-value=24 Score=21.93 Aligned_cols=14 Identities=43% Similarity=0.698 Sum_probs=7.5
Q ss_pred CeEEEecchhHHHH
Q 045548 36 PCFCFGHSTGAAIV 49 (221)
Q Consensus 36 p~~l~GhSmGG~ia 49 (221)
|+.++||++|..+-
T Consensus 53 pV~ilgq~~gl~iy 66 (72)
T PF07578_consen 53 PVFILGQSFGLFIY 66 (72)
T ss_pred hHHHHHHhcChHHH
Confidence 45555555555544
No 260
>KOG2308 consensus Phosphatidic acid-preferring phospholipase A1, contains DDHD domain [Lipid transport and metabolism; Intracellular trafficking, secretion, and vesicular transport]
Probab=38.89 E-value=17 Score=33.04 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHhcCCC--CCeEEEecchhHHHHHHHh
Q 045548 17 AVKDMKLFVEKVLADNPG--LPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~--~p~~l~GhSmGG~ia~~~a 53 (221)
++.++..........+|+ ..|.++|||+|..|+.-..
T Consensus 397 V~~elNr~y~lf~~rnPef~G~Vsi~gHSLGSvit~Dil 435 (741)
T KOG2308|consen 397 VARELNRLYALFKDRNPEFNGKVSIAGHSLGSVITYDIL 435 (741)
T ss_pred HHHHHHHHHHHHHhcChhhcCceeeccCCCCceEEEeec
Confidence 334444444444444453 3599999999999986543
No 261
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=38.76 E-value=29 Score=29.48 Aligned_cols=61 Identities=16% Similarity=0.211 Sum_probs=40.2
Q ss_pred CCCCCCcEEEeecCCCcccChHHHHHHHHHc-CCCCceEEEcCCcccccCC----CCChHHHHHHHHHHHH
Q 045548 147 LNRLKVPFLLLHGTADTVTDPEASKKLHKYA-SSADKTMKLYQGFLHDLLF----EPERDDIVKDIIDWLC 212 (221)
Q Consensus 147 ~~~i~~P~Lii~G~~D~iv~~~~~~~~~~~~-~~~~~~~~~~~~~~H~i~~----e~~~~~v~~~i~~fl~ 212 (221)
+.+-.--+|+|.|+.|++.-.. +..- ...+....+.||+.|.--. +.+++++...|.+|..
T Consensus 347 vr~~~~rmlFVYG~nDPW~A~~-----f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 347 VRNNGPRMLFVYGENDPWSAEP-----FRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHhCCCeEEEEeCCCCCcccCc-----cccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 3333455699999999876543 1211 2335566677999995443 4467888888999965
No 262
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=37.98 E-value=55 Score=24.89 Aligned_cols=31 Identities=16% Similarity=0.015 Sum_probs=21.3
Q ss_pred HHHHHHhcCCCCCeEEEecchhHHHHHHHhcC
Q 045548 24 FVEKVLADNPGLPCFCFGHSTGAAIVLKAVLD 55 (221)
Q Consensus 24 ~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~~ 55 (221)
+++.+.+... .+=.+.|-|+|+++++.++..
T Consensus 16 vl~aL~e~g~-~~d~i~GtS~GAl~aa~~a~~ 46 (215)
T cd07209 16 VLKALAEAGI-EPDIISGTSIGAINGALIAGG 46 (215)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcC
Confidence 3444444332 245799999999999988864
No 263
>PF13289 SIR2_2: SIR2-like domain
Probab=37.07 E-value=76 Score=21.81 Aligned_cols=14 Identities=14% Similarity=0.095 Sum_probs=10.3
Q ss_pred CCCeEEEecchhHH
Q 045548 34 GLPCFCFGHSTGAA 47 (221)
Q Consensus 34 ~~p~~l~GhSmGG~ 47 (221)
..++.++|.|++=-
T Consensus 86 ~~~~lfiGys~~D~ 99 (143)
T PF13289_consen 86 SKTLLFIGYSFNDP 99 (143)
T ss_pred CCCEEEEEECCCCH
Confidence 44688899998643
No 264
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=36.26 E-value=63 Score=23.59 Aligned_cols=28 Identities=21% Similarity=0.232 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEE
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCF 40 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~ 40 (221)
+.+.+.+++.++++.++...|+.+++++
T Consensus 85 ~~~~~~~~l~~li~~i~~~~~~~~iiv~ 112 (191)
T cd01836 85 SIARWRKQLAELVDALRAKFPGARVVVT 112 (191)
T ss_pred CHHHHHHHHHHHHHHHHhhCCCCEEEEE
Confidence 4566777777777777665555555554
No 265
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=36.09 E-value=30 Score=28.43 Aligned_cols=18 Identities=28% Similarity=0.259 Sum_probs=14.3
Q ss_pred CeEEEecchhHHHHHHHh
Q 045548 36 PCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a 53 (221)
|-+++|||+|=..|+..+
T Consensus 125 ~~~~~GHSlGE~aA~~~A 142 (343)
T PLN02752 125 VDVCAGLSLGEYTALVFA 142 (343)
T ss_pred CCeeeeccHHHHHHHHHh
Confidence 457899999998887654
No 266
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=35.89 E-value=63 Score=25.74 Aligned_cols=19 Identities=16% Similarity=-0.116 Sum_probs=16.3
Q ss_pred eEEEecchhHHHHHHHhcC
Q 045548 37 CFCFGHSTGAAIVLKAVLD 55 (221)
Q Consensus 37 ~~l~GhSmGG~ia~~~a~~ 55 (221)
=++.|-|||+.++..+|..
T Consensus 40 d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 40 DAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred cEEEEECHHHHHHHHHHcC
Confidence 4688999999999988753
No 267
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=35.86 E-value=68 Score=24.13 Aligned_cols=29 Identities=14% Similarity=0.284 Sum_probs=22.3
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEe
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFG 41 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~G 41 (221)
+.+++.+++..+++.++...|+.++++++
T Consensus 107 ~~~~~~~~l~~ii~~l~~~~P~~~Iil~~ 135 (214)
T cd01820 107 TAEEIAEGILAIVEEIREKLPNAKILLLG 135 (214)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 57778888888888888777777776664
No 268
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=35.71 E-value=35 Score=29.61 Aligned_cols=58 Identities=24% Similarity=0.245 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHHHHHhcCC---CC--CeEEEecchhHHHHHHHhc--CCCCCCCccEEEEeCCc
Q 045548 13 SLDAAVKDMKLFVEKVLADNP---GL--PCFCFGHSTGAAIVLKAVL--DPKFEANVAGVVLTSPA 71 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~---~~--p~~l~GhSmGG~ia~~~a~--~~~~~~~i~~lil~sp~ 71 (221)
++....+|+..+.+.+....| .. |.+|+|-|.||.-+..+|. ..+. ...+++++.++.
T Consensus 171 d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~-~~~~~~~nlssv 235 (498)
T COG2939 171 DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDN-IALNGNVNLSSV 235 (498)
T ss_pred chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhc-cccCCceEeeee
Confidence 455666777776666665433 23 8999999999999887763 1110 135666666553
No 269
>PRK10279 hypothetical protein; Provisional
Probab=34.41 E-value=63 Score=26.19 Aligned_cols=19 Identities=16% Similarity=0.018 Sum_probs=16.6
Q ss_pred CeEEEecchhHHHHHHHhc
Q 045548 36 PCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~ 54 (221)
+-++.|-|||++++..+|.
T Consensus 34 ~d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred cCEEEEEcHHHHHHHHHHc
Confidence 5679999999999998874
No 270
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=33.71 E-value=74 Score=23.02 Aligned_cols=25 Identities=12% Similarity=0.235 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCeEEE
Q 045548 16 AAVKDMKLFVEKVLADNPGLPCFCF 40 (221)
Q Consensus 16 ~~~~dl~~~~~~~~~~~~~~p~~l~ 40 (221)
++.+.+..+++.++...|+.|++++
T Consensus 75 ~~~~~~~~~i~~i~~~~p~~~iil~ 99 (177)
T cd01844 75 MVRERLGPLVKGLRETHPDTPILLV 99 (177)
T ss_pred HHHHHHHHHHHHHHHHCcCCCEEEE
Confidence 4556666666666666555555544
No 271
>COG0069 GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
Probab=33.18 E-value=69 Score=27.85 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=22.6
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHhcCCCCCe
Q 045548 4 SDGLHAYVHSLDAAVKDMKLFVEKVLADNPGLPC 37 (221)
Q Consensus 4 S~~~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~ 37 (221)
|+.++..++| ++|+.++|..+++-.+..+|
T Consensus 277 SP~pHHDiys----ieDLaqlI~dLk~~~~~~~I 306 (485)
T COG0069 277 SPPPHHDIYS----IEDLAQLIKDLKEANPWAKI 306 (485)
T ss_pred CCCCcccccC----HHHHHHHHHHHHhcCCCCeE
Confidence 5666666777 67888999999887777664
No 272
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=33.08 E-value=67 Score=23.77 Aligned_cols=29 Identities=21% Similarity=0.355 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEec
Q 045548 14 LDAAVKDMKLFVEKVLADNPGLPCFCFGH 42 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~~~~p~~l~Gh 42 (221)
.+++.+.+..+++.++...|+.+++++|.
T Consensus 101 ~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~ 129 (204)
T cd04506 101 EETYQNNLKKIFKEIRKLNPDAPIFLVGL 129 (204)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 45577788888888888777778877753
No 273
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=33.00 E-value=1.2e+02 Score=27.20 Aligned_cols=48 Identities=15% Similarity=0.317 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEec------chhHHHHHHH-hcCCCCCCCccEEEEeCC
Q 045548 17 AVKDMKLFVEKVLADNPGLPCFCFGH------STGAAIVLKA-VLDPKFEANVAGVVLTSP 70 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~~p~~l~Gh------SmGG~ia~~~-a~~~~~~~~i~~lil~sp 70 (221)
-++++-..++.+..+.. .|+++|| |+|+++++.. |..-+ -++.++..|
T Consensus 322 RaRvis~al~d~i~e~d--~VfImGHk~pDmDalGsAig~~~~A~~~~----~~a~~v~dp 376 (655)
T COG3887 322 RARVISTALSDIIKESD--NVFIMGHKFPDMDALGSAIGMQKFASMNN----KEAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHHhhcC--cEEEEccCCCChHHHHHHHHHHHHHHhcc----cccEEEECc
Confidence 34566666666655543 4999999 8999999864 43211 155566554
No 274
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.
Probab=32.85 E-value=67 Score=26.22 Aligned_cols=39 Identities=15% Similarity=0.165 Sum_probs=25.7
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhH
Q 045548 8 HAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGA 46 (221)
Q Consensus 8 ~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG 46 (221)
.|+...-+.+.+++.+.++...++.+..-.+++=|||||
T Consensus 62 ~G~~~~~~~~~e~i~~~ir~~~E~cD~~~gf~i~~slgG 100 (328)
T cd00286 62 FGHETAGEEYQEEILDIIRKEAEECDSLQGFFITHSLGG 100 (328)
T ss_pred eeeccccHHHHHHHHHHHHHHHHhCCCccceEEEeecCC
Confidence 454322233666666667766666666678999999988
No 275
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=32.79 E-value=94 Score=22.20 Aligned_cols=29 Identities=17% Similarity=0.385 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEe
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFG 41 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~G 41 (221)
+.+.+.+.+.++++.++...|+.++++++
T Consensus 68 ~~~~~~~~~~~lv~~i~~~~~~~~iil~~ 96 (171)
T cd04502 68 TPEEVLRDFRELVNRIRAKLPDTPIAIIS 96 (171)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCcEEEEE
Confidence 46777888888888887777777777765
No 276
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=32.33 E-value=67 Score=27.34 Aligned_cols=63 Identities=14% Similarity=0.281 Sum_probs=33.8
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCCCCceE--EEcCCcccccC--CCCChHHHHHHHHHHHHHh
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASSADKTM--KLYQGFLHDLL--FEPERDDIVKDIIDWLCCR 214 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~--~~~~~~~H~i~--~e~~~~~v~~~i~~fl~~~ 214 (221)
..|++|+.|.-|.+-+-- ...+.+.+....--. +-.||.|+... .+++.+++.+.+++||...
T Consensus 189 p~P~VIv~gGlDs~qeD~-~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQEDL-YRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASR 255 (411)
T ss_dssp -EEEEEEE--TTS-GGGG-HHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCcchhHHHH-HHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcC
Confidence 579999999999876432 122222221112223 34578887532 3445678999999999875
No 277
>cd02651 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine a
Probab=31.96 E-value=74 Score=25.68 Aligned_cols=49 Identities=18% Similarity=0.249 Sum_probs=34.3
Q ss_pred HHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh--cCCCCCCCccEEEEeCCcc
Q 045548 21 MKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV--LDPKFEANVAGVVLTSPAV 72 (221)
Q Consensus 21 l~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a--~~~~~~~~i~~lil~sp~~ 72 (221)
-.+++....+++|+ ++.++ ++|.+.-++.| .+|+..++++.+++++..+
T Consensus 101 a~~~i~~~~~~~~~-evtiv--a~GPLTNlA~al~~~P~~~~~ik~iviMGG~~ 151 (302)
T cd02651 101 AVDAIIDTLRASPE-PITLV--ATGPLTNIALLLRKYPELAERIKEIVLMGGAL 151 (302)
T ss_pred HHHHHHHHHHhCCC-CEEEE--EcCchHHHHHHHHHChhhHhhcCEEEEecCCc
Confidence 33444444556666 68888 78888777665 3787777899999987654
No 278
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=31.96 E-value=87 Score=21.93 Aligned_cols=28 Identities=18% Similarity=0.355 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEE
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCF 40 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~ 40 (221)
+.+.+.+.+..+++.++...|+.+++++
T Consensus 58 ~~~~~~~~~~~~i~~i~~~~p~~~ii~~ 85 (157)
T cd01833 58 DPDTAPDRLRALIDQMRAANPDVKIIVA 85 (157)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 5677788888888888776666555544
No 279
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=31.85 E-value=87 Score=22.64 Aligned_cols=29 Identities=10% Similarity=0.243 Sum_probs=18.8
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEe
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFG 41 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~G 41 (221)
+.+.+.+.+..+++.++...++.+++++|
T Consensus 75 ~~~~~~~~~~~li~~i~~~~~~~~iv~~~ 103 (189)
T cd01825 75 NASEYRQQLREFIKRLRQILPNASILLVG 103 (189)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCeEEEEc
Confidence 45666777777777776655566666654
No 280
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=31.58 E-value=36 Score=24.80 Aligned_cols=60 Identities=17% Similarity=0.212 Sum_probs=35.2
Q ss_pred CCCCcEEEeecCCCccc-ChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHH
Q 045548 149 RLKVPFLLLHGTADTVT-DPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDW 210 (221)
Q Consensus 149 ~i~~P~Lii~G~~D~iv-~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~f 210 (221)
.+.+|+.++.+++|... +.... .-|+.......+.+.++| .|..+.+.....+...+..|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~-~~W~~~~~~~~~~~~~~g-~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 151 PVAAPTLLVRASEPLAEWPDEDP-DGWRAHWPLPHTVVDVPG-DHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCCEEEEeccCCCCCCCCCCc-ccccCCCCCCceeEEccC-chHHHHHHhHHHHHHHHHhh
Confidence 46899999999999654 22222 224444444567788885 46544333444444444444
No 281
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=31.49 E-value=91 Score=28.04 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=27.6
Q ss_pred eEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCcccC
Q 045548 37 CFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPAVGV 74 (221)
Q Consensus 37 ~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~~~~ 74 (221)
++--+-|=||..++++++ +. ...|+||+..-|....
T Consensus 287 VIAssvSNGGgAal~AAEqD~--~glIdgVvv~EP~v~~ 323 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDT--QGLIDGVVVSEPNVNL 323 (690)
T ss_pred EEEEeecCccHHHHhHhhccc--CCceeeEEecCCccCC
Confidence 666689999999999986 43 2479999988776544
No 282
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=31.48 E-value=96 Score=22.36 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecc
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHS 43 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhS 43 (221)
.|+++..+-+..+++.+..+.++..+.+++|.
T Consensus 115 Es~~~~~~R~~~~~~~l~~~~~~~~vlvVsHg 146 (177)
T TIGR03162 115 ESFADFYQRVSEFLEELLKAHEGDNVLIVTHG 146 (177)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCeEEEEECH
Confidence 46777777788888887766555678888886
No 283
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=31.12 E-value=1e+02 Score=24.60 Aligned_cols=42 Identities=10% Similarity=0.177 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a 53 (221)
.|.+++.+-+...+.++..++++..+.|++|.-+=-++.+..
T Consensus 172 es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~~~~~l 213 (272)
T KOG3734|consen 172 ESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDTCSAQL 213 (272)
T ss_pred ccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHHh
Confidence 477888888999999999999998899999987766665544
No 284
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=30.98 E-value=15 Score=30.81 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=21.3
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCC-CCceEEEcCC
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASS-ADKTMKLYQG 189 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~-~~~~~~~~~~ 189 (221)
--|+|++.|++|+++|. .+..|+.... .+.+++.||+
T Consensus 306 PRPll~~nG~~Dklf~i--V~~AY~~~~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 306 PRPLLFENGGKDKLFPI--VRRAYAIMGAPDNFQIHHYPK 343 (390)
T ss_dssp TS-EEESS-B-HHHHHH--HHHHHHHTT-GGGEEE---GG
T ss_pred CCcchhhcCCcccccHH--HHHHHHhcCCCcceEEeeccc
Confidence 57999999999999876 4555655432 2467778875
No 285
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=30.86 E-value=92 Score=24.43 Aligned_cols=18 Identities=22% Similarity=0.163 Sum_probs=15.8
Q ss_pred eEEEecchhHHHHHHHhc
Q 045548 37 CFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 37 ~~l~GhSmGG~ia~~~a~ 54 (221)
=.+.|-|.|++++..++.
T Consensus 29 d~i~GtSaGAi~a~~~~~ 46 (266)
T cd07208 29 DLVIGVSAGALNAASYLS 46 (266)
T ss_pred CEEEEECHHHHhHHHHHh
Confidence 379999999999998765
No 286
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=30.60 E-value=68 Score=26.88 Aligned_cols=23 Identities=22% Similarity=0.482 Sum_probs=18.0
Q ss_pred HhCCCCCCcEEEeecCCCcccCh
Q 045548 145 RNLNRLKVPFLLLHGTADTVTDP 167 (221)
Q Consensus 145 ~~~~~i~~P~Lii~G~~D~iv~~ 167 (221)
..+...++|+++|+|.+|..--.
T Consensus 69 ~~l~~~~Ipv~~I~GNHD~~~~~ 91 (390)
T COG0420 69 RRLKDAGIPVVVIAGNHDSPSRL 91 (390)
T ss_pred HHhccCCCcEEEecCCCCchhcc
Confidence 34666889999999999975543
No 287
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=30.54 E-value=81 Score=23.94 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc
Q 045548 17 AVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~ 54 (221)
....+...+-.+..+.|+.+++|+=+|-||.+..-+|.
T Consensus 40 ~a~~i~aqll~Lea~~~~k~I~lyINSpGG~V~aG~AI 77 (200)
T COG0740 40 MANLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGLAI 77 (200)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEeCCCcccchhHHH
Confidence 34555555666666778889999999999999877664
No 288
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=30.10 E-value=90 Score=24.97 Aligned_cols=18 Identities=33% Similarity=0.394 Sum_probs=15.7
Q ss_pred eEEEecchhHHHHHHHhc
Q 045548 37 CFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 37 ~~l~GhSmGG~ia~~~a~ 54 (221)
=++.|-|.||.+|+.++.
T Consensus 36 D~i~GTSaGaiia~~la~ 53 (288)
T cd07213 36 DLFAGTSAGSLIALGLAL 53 (288)
T ss_pred eEEEEeCHHHHHHHHHHc
Confidence 379999999999998764
No 289
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=30.09 E-value=1e+02 Score=22.03 Aligned_cols=28 Identities=14% Similarity=0.236 Sum_probs=15.4
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEE
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCF 40 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~ 40 (221)
+.+++.+.+..+++.++...|+.+++++
T Consensus 69 ~~~~~~~~~~~l~~~~~~~~p~~~vi~~ 96 (174)
T cd01841 69 SSNQFIKWYRDIIEQIREEFPNTKIYLL 96 (174)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 4555666666666666555444444444
No 290
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=29.70 E-value=46 Score=27.05 Aligned_cols=19 Identities=26% Similarity=-0.024 Sum_probs=16.3
Q ss_pred CeEEEecchhHHHHHHHhc
Q 045548 36 PCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~ 54 (221)
+=.+.|-|||+.++..++.
T Consensus 44 ~d~v~GtSaGAi~ga~ya~ 62 (306)
T cd07225 44 VDMVGGTSIGAFIGALYAE 62 (306)
T ss_pred CCEEEEECHHHHHHHHHHc
Confidence 4578899999999998875
No 291
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=29.61 E-value=1e+02 Score=22.98 Aligned_cols=33 Identities=12% Similarity=0.134 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecch
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHST 44 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSm 44 (221)
.|+.+...-+..+++.+....++..+.+++|.-
T Consensus 119 Es~~~~~~Rv~~~l~~l~~~~~~~~iliVsHg~ 151 (199)
T PRK15004 119 EGFQAFSQRVERFIARLSAFQHYQNLLIVSHQG 151 (199)
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCeEEEEcChH
Confidence 467777778888888887766666788888843
No 292
>PRK13462 acid phosphatase; Provisional
Probab=29.54 E-value=1.2e+02 Score=22.78 Aligned_cols=32 Identities=13% Similarity=0.052 Sum_probs=26.1
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecc
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHS 43 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhS 43 (221)
.|+.+..+-+..+++.+...+++..+.+++|.
T Consensus 117 ES~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg 148 (203)
T PRK13462 117 ESVAQVNERADRAVALALEHMESRDVVFVSHG 148 (203)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCC
Confidence 47788888888888888776666679999997
No 293
>PRK09955 rihB ribonucleoside hydrolase 2; Provisional
Probab=29.28 E-value=1.2e+02 Score=24.78 Aligned_cols=48 Identities=15% Similarity=0.232 Sum_probs=32.6
Q ss_pred HHHHHHHHhcCCCCCeEEEecchhHHHHHHHh--cCCCCCCCccEEEEeCCcc
Q 045548 22 KLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV--LDPKFEANVAGVVLTSPAV 72 (221)
Q Consensus 22 ~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a--~~~~~~~~i~~lil~sp~~ 72 (221)
.+++-.+.+++|+ ++.|+ ++|-+.=++.| .+|+..++|+.+++++..+
T Consensus 105 ~~~i~~~~~~~p~-eitiv--a~GPLTNlA~al~~~P~~~~~i~~iviMGG~~ 154 (313)
T PRK09955 105 VKYIIDTLMASDG-DITLV--PVGPLSNIAVAMRMQPAILPKIREIVLMGGAY 154 (313)
T ss_pred HHHHHHHHHhCCC-CEEEE--EcCcHHHHHHHHHHChHHHHhCCEEEEeCCCC
Confidence 3444444455665 58888 67777666554 5787777899999988664
No 294
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=29.13 E-value=92 Score=22.24 Aligned_cols=21 Identities=24% Similarity=0.017 Sum_probs=16.7
Q ss_pred CCeEEEecchhHHHHHHHhcC
Q 045548 35 LPCFCFGHSTGAAIVLKAVLD 55 (221)
Q Consensus 35 ~p~~l~GhSmGG~ia~~~a~~ 55 (221)
.+-.+.|-|.||++++.++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 456799999999999877653
No 295
>KOG1374 consensus Gamma tubulin [Cytoskeleton]
Probab=28.87 E-value=80 Score=26.56 Aligned_cols=47 Identities=21% Similarity=0.386 Sum_probs=30.2
Q ss_pred CCCCCCc---ccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHH
Q 045548 1 HGGSDGL---HAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI 48 (221)
Q Consensus 1 hG~S~~~---~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~i 48 (221)
||...|. .||.- -+..-+|+-..|+..........-+++-||+-|..
T Consensus 96 ~ggGAGNNWA~GY~~-G~~~~e~ImdiIdrEad~~DsleGF~l~hSiAGGT 145 (448)
T KOG1374|consen 96 HGGGAGNNWASGYSQ-GERVQEDIMDIIDREADGSDSLEGFVLCHSIAGGT 145 (448)
T ss_pred CCCCccccccccccc-chhhHHHHHHHHHHhhcCCCcccceeEEEeecCCC
Confidence 5666662 34322 34566778777777666555666788989986544
No 296
>PF03283 PAE: Pectinacetylesterase
Probab=28.86 E-value=96 Score=25.91 Aligned_cols=33 Identities=15% Similarity=0.295 Sum_probs=21.5
Q ss_pred HHHHHHHHHhc-CCC-CCeEEEecchhHHHHHHHh
Q 045548 21 MKLFVEKVLAD-NPG-LPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 21 l~~~~~~~~~~-~~~-~p~~l~GhSmGG~ia~~~a 53 (221)
+.++++.+... .++ ..++|-|-|.||.-++..+
T Consensus 140 ~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 140 LRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 44455554443 222 2599999999999998643
No 297
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.70 E-value=47 Score=27.51 Aligned_cols=17 Identities=41% Similarity=0.454 Sum_probs=15.0
Q ss_pred EEEecchhHHHHHHHhc
Q 045548 38 FCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 38 ~l~GhSmGG~ia~~~a~ 54 (221)
++.|-|+||.+|+.++.
T Consensus 44 lIaGTStGgIIAa~la~ 60 (344)
T cd07217 44 FVGGTSTGSIIAACIAL 60 (344)
T ss_pred EEEEecHHHHHHHHHHc
Confidence 68899999999998764
No 298
>PRK13463 phosphatase PhoE; Provisional
Probab=28.58 E-value=99 Score=23.17 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecc
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHS 43 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhS 43 (221)
.|+++..+-+..+++.+..+.++..+.+++|+
T Consensus 121 Es~~~~~~R~~~~l~~i~~~~~~~~vlvVsHg 152 (203)
T PRK13463 121 ENFEAVHKRVIEGMQLLLEKHKGESILIVSHA 152 (203)
T ss_pred eEHHHHHHHHHHHHHHHHHhCCCCEEEEEeCh
Confidence 36778888888888887766655568888884
No 299
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=28.34 E-value=1.2e+02 Score=21.90 Aligned_cols=19 Identities=21% Similarity=0.053 Sum_probs=16.4
Q ss_pred CeEEEecchhHHHHHHHhc
Q 045548 36 PCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~ 54 (221)
+=.+.|-|.|++++..++.
T Consensus 29 ~d~i~GtSaGal~a~~~a~ 47 (175)
T cd07205 29 IDIVSGTSAGAIVGALYAA 47 (175)
T ss_pred eeEEEEECHHHHHHHHHHc
Confidence 4579999999999988874
No 300
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=28.28 E-value=92 Score=24.25 Aligned_cols=17 Identities=24% Similarity=0.215 Sum_probs=15.5
Q ss_pred EEEecchhHHHHHHHhc
Q 045548 38 FCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 38 ~l~GhSmGG~ia~~~a~ 54 (221)
.+.|-|+|++++..++.
T Consensus 34 ~i~GtSAGAl~aa~~a~ 50 (243)
T cd07204 34 RIAGASAGAIVAAVVLC 50 (243)
T ss_pred EEEEEcHHHHHHHHHHh
Confidence 89999999999998875
No 301
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=28.10 E-value=47 Score=26.82 Aligned_cols=17 Identities=35% Similarity=0.452 Sum_probs=14.9
Q ss_pred EEEecchhHHHHHHHhc
Q 045548 38 FCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 38 ~l~GhSmGG~ia~~~a~ 54 (221)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999998764
No 302
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=28.07 E-value=1.2e+02 Score=22.91 Aligned_cols=39 Identities=10% Similarity=0.106 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh
Q 045548 15 DAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a 53 (221)
+..++++..-+..+..++++.|++++=+|-||.+...++
T Consensus 36 ~~~a~~ii~~Ll~l~~~~~~~~I~l~INSpGG~v~~g~a 74 (196)
T PRK12551 36 SDSANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGLG 74 (196)
T ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEeCCCcchhhHHH
Confidence 345666777777777777788999999999999876554
No 303
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=27.99 E-value=1.1e+02 Score=23.45 Aligned_cols=19 Identities=26% Similarity=0.132 Sum_probs=16.4
Q ss_pred CeEEEecchhHHHHHHHhc
Q 045548 36 PCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~ 54 (221)
+-.+.|-|+|+.++..++.
T Consensus 29 ~~~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 29 PSAISGTSAGALVGGLFAS 47 (221)
T ss_pred ceEEEEeCHHHHHHHHHHc
Confidence 4579999999999998875
No 304
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=27.80 E-value=98 Score=24.23 Aligned_cols=17 Identities=24% Similarity=0.067 Sum_probs=15.1
Q ss_pred EEEecchhHHHHHHHhc
Q 045548 38 FCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 38 ~l~GhSmGG~ia~~~a~ 54 (221)
.+.|=|+|++++..++.
T Consensus 33 ~i~GtSAGAl~aa~~a~ 49 (245)
T cd07218 33 KISGASAGALAACCLLC 49 (245)
T ss_pred eEEEEcHHHHHHHHHHh
Confidence 49999999999998875
No 305
>cd00455 nuc_hydro nuc_hydro: Nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium, the purine-specific inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax and, pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases such as URH1 from Saccharomyces cerevisiae, RihA and RihB from Escherichia coli. Nucleoside hydrolases are of interest as a target for antiprotozoan drugs as, no nucleoside hydrolase activity or genes encoding these enzymes have been detected in humans and, parasitic protozoans lack de novo purine synthesis relying on nucleosid
Probab=27.37 E-value=77 Score=25.49 Aligned_cols=47 Identities=19% Similarity=0.306 Sum_probs=31.7
Q ss_pred HHHHHHHhcCCCCCeEEEecchhHHHHHHHh--cCCCCCCCccEEEEeCCcc
Q 045548 23 LFVEKVLADNPGLPCFCFGHSTGAAIVLKAV--LDPKFEANVAGVVLTSPAV 72 (221)
Q Consensus 23 ~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a--~~~~~~~~i~~lil~sp~~ 72 (221)
+++....+++|+ ++.++ ++|.+.=++.+ .+|+..++++.+++++..+
T Consensus 101 ~~i~~~~~~~~~-~v~il--a~GplTNlA~al~~~p~~~~~i~~iviMGG~~ 149 (295)
T cd00455 101 QLLIDLIRKYPD-EITIV--ALGPLTNLAMAFILDPDIKDRVKEIVIMGGAF 149 (295)
T ss_pred HHHHHHHHhcCC-CeEEE--ECCchHHHHHHHHHChHHHHhCCEEEEcCCcc
Confidence 334444455665 68887 78887766554 3676666899999988654
No 306
>KOG2088 consensus Predicted lipase/calmodulin-binding heat-shock protein [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=27.35 E-value=56 Score=29.31 Aligned_cols=26 Identities=19% Similarity=0.121 Sum_probs=20.7
Q ss_pred HHhcCCCCCeEEEecchhHHHHHHHh
Q 045548 28 VLADNPGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 28 ~~~~~~~~p~~l~GhSmGG~ia~~~a 53 (221)
.-..+|+-+..+.|||+||..+...+
T Consensus 245 ~~~~~p~~~~~~~ghslg~~~~~l~~ 270 (596)
T KOG2088|consen 245 LWRLYPSYKLTGVGHSLGGLSASLLA 270 (596)
T ss_pred hhhhcCCCceeEEecccccchhhhhh
Confidence 33456778899999999999987654
No 307
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=27.19 E-value=2.9e+02 Score=21.96 Aligned_cols=62 Identities=13% Similarity=0.091 Sum_probs=35.8
Q ss_pred CCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCC-cccccCCCCChHHHHHHHHHHHHHhh
Q 045548 151 KVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQG-FLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 151 ~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
+-|++++...-- +....-..+.+++.+. .-+++-++ .......+...-+...++++|+.+.+
T Consensus 16 ~yPVv~f~~G~~--~~~s~Ys~ll~hvASh-GyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L 78 (259)
T PF12740_consen 16 TYPVVLFLHGFL--LINSWYSQLLEHVASH-GYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGL 78 (259)
T ss_pred CcCEEEEeCCcC--CCHHHHHHHHHHHHhC-ceEEEEecccccCCCCcchhHHHHHHHHHHHHhcc
Confidence 357776665554 4444466678888774 44444444 22222222334566788999988754
No 308
>PF08257 Sulfakinin: Sulfakinin family; InterPro: IPR013259 The sulfakinin (SK) family of neuropeptides have only been identified in crustaceans and insects. For most species there is the potential for producing two sulfakinin peptides, one has a short sulfakinin sequence. The function of the sulfakinins is difficult to assess. For the Periplaneta americana (American cockroach), various forms of the endogenous sulfakinins have been shown to be active on the hindgut, and also on the heart. In Calliphora vomitoria (Blue blowfly) the peptides act as neurotransmitters or neuromodulators, linking the brain with all thoracic and abdominal ganglia. In adults of Penaeus monodon (Penoeid shrimp) they appear to be restricted to a few neurones in the brain with a neural pathway extending along to the ventral thoracic and abdominal ganglia [].
Probab=27.14 E-value=34 Score=11.96 Aligned_cols=6 Identities=17% Similarity=0.263 Sum_probs=3.5
Q ss_pred CCcccc
Q 045548 188 QGFLHD 193 (221)
Q Consensus 188 ~~~~H~ 193 (221)
+..||+
T Consensus 2 ~dyghm 7 (9)
T PF08257_consen 2 DDYGHM 7 (9)
T ss_pred Cccccc
Confidence 456675
No 309
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=27.11 E-value=1.2e+02 Score=21.47 Aligned_cols=27 Identities=15% Similarity=0.208 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEE
Q 045548 14 LDAAVKDMKLFVEKVLADNPGLPCFCF 40 (221)
Q Consensus 14 ~~~~~~dl~~~~~~~~~~~~~~p~~l~ 40 (221)
.+++.+.+..+++.+....++.+++++
T Consensus 67 ~~~~~~~l~~li~~~~~~~~~~~vi~~ 93 (169)
T cd01828 67 DEDIVANYRTILEKLRKHFPNIKIVVQ 93 (169)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 455555555555555544444444433
No 310
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=27.06 E-value=1.3e+02 Score=23.95 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhc-CCCCCeEEEecchhHHHHHHHh
Q 045548 20 DMKLFVEKVLAD-NPGLPCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 20 dl~~~~~~~~~~-~~~~p~~l~GhSmGG~ia~~~a 53 (221)
.+......+.+. .|+..++++|.|=|+.+|-.++
T Consensus 76 ~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a 110 (277)
T PF09994_consen 76 RIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFA 110 (277)
T ss_pred HHHHHHHHHHhccCCcceEEEEecCccHHHHHHHH
Confidence 344444444333 3455799999999999998776
No 311
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=26.17 E-value=2e+02 Score=20.86 Aligned_cols=40 Identities=10% Similarity=0.134 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHH
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKA 52 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~ 52 (221)
|.+++.+.+..+.+++...+.+.+.+++|-.-||+.-...
T Consensus 4 s~~~i~~~i~~lA~~I~~~~~~~~~vvv~i~~GG~~~a~~ 43 (166)
T TIGR01203 4 PEEQIKARIAELAKQITEDYAGKPLVLLCVLKGSFPFFAD 43 (166)
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHH
Confidence 5667777777777777776655678999999999986543
No 312
>PF08477 Miro: Miro-like protein; InterPro: IPR013684 Mitochondrial Rho proteins (Miro-1, Q8IXI2 from SWISSPROT and Miro-2, Q8IXI1 from SWISSPROT) are atypical Rho GTPases. They have a unique domain organisation, with tandem GTP-binding domains and two EF hand domains (IPR002048 from INTERPRO), that may bind calcium. They are also larger than classical small GTPases. It has been proposed that they are involved in mitochondrial homeostasis and apoptosis []. ; GO: 0005525 GTP binding, 0007264 small GTPase mediated signal transduction, 0005622 intracellular; PDB: 2IWR_A 2BMJ_A 3IHW_A 2ZEJ_A 3D6T_B 3DPU_A.
Probab=26.05 E-value=1.2e+02 Score=19.93 Aligned_cols=24 Identities=8% Similarity=0.361 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHhcCCCCCeEEEec
Q 045548 19 KDMKLFVEKVLADNPGLPCFCFGH 42 (221)
Q Consensus 19 ~dl~~~~~~~~~~~~~~p~~l~Gh 42 (221)
.++..++..+....++.|++|+|.
T Consensus 93 ~~~~~~l~~~~~~~~~~piilv~n 116 (119)
T PF08477_consen 93 SQLLKWLKNIRKRDKNIPIILVGN 116 (119)
T ss_dssp HHHHHHHHHHHHHSSCSEEEEEEE
T ss_pred HHHHHHHHHHHccCCCCCEEEEEe
Confidence 445566777766666789999873
No 313
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=25.91 E-value=1.1e+02 Score=23.31 Aligned_cols=40 Identities=8% Similarity=0.074 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc
Q 045548 15 DAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~ 54 (221)
++.++++..-+-.+..+.++.|++++=+|-||.+...++.
T Consensus 38 ~~~a~~ii~~Ll~L~~~~~~~~I~l~INSpGG~v~~GlaI 77 (201)
T PRK14513 38 SQMANTIVAQLLLLDSQNPEQEIQMYINCPGGEVYAGLAI 77 (201)
T ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEECCCCchhhHHHH
Confidence 3445666666666666777789999999999998766553
No 314
>COG1957 URH1 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]
Probab=25.83 E-value=1.8e+02 Score=23.82 Aligned_cols=52 Identities=19% Similarity=0.186 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHh--cCCCCCCCccEEEEeCCcccC
Q 045548 20 DMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV--LDPKFEANVAGVVLTSPAVGV 74 (221)
Q Consensus 20 dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a--~~~~~~~~i~~lil~sp~~~~ 74 (221)
+..+++-...+++| .++.|+ ..|-+.-+++| .+|+...+++.+++++..+..
T Consensus 103 ~A~~~ii~~l~~~~-g~vtlv--a~GPLTNiAlAl~~~P~i~~~ik~iviMGGa~~~ 156 (311)
T COG1957 103 HAVDAIIDTLMANP-GEVTLV--ATGPLTNIALALRKDPEIAKRIKEIVIMGGAFFV 156 (311)
T ss_pred cHHHHHHHHHHhCC-CcEEEE--ecCChHHHHHHHHhCcchhhhhcEEEEecCccCC
Confidence 33444444444555 468887 56766655544 478777789999999876544
No 315
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=25.82 E-value=78 Score=23.66 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEecch
Q 045548 15 DAAVKDMKLFVEKVLADNPGLPCFCFGHST 44 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~~~~p~~l~GhSm 44 (221)
+...+-+..+++.+..+++..+-.++|||-
T Consensus 129 ~aQ~~aL~~L~~~L~~~y~i~~~~IvGH~d 158 (185)
T PRK11789 129 DAQYQALAALTRALRAAYPIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHhEEehhh
Confidence 445677889999999998755567999963
No 316
>COG3675 Predicted lipase [Lipid metabolism]
Probab=25.56 E-value=37 Score=27.34 Aligned_cols=42 Identities=26% Similarity=0.334 Sum_probs=24.2
Q ss_pred HHHHHhcCCC-CCeEEEecchhHHHHHHHhcC--CCCCCCccEEEE
Q 045548 25 VEKVLADNPG-LPCFCFGHSTGAAIVLKAVLD--PKFEANVAGVVL 67 (221)
Q Consensus 25 ~~~~~~~~~~-~p~~l~GhSmGG~ia~~~a~~--~~~~~~i~~lil 67 (221)
.+++..+.|. -.+.+.|||.||+++.-.+-+ ... ++++.+++
T Consensus 164 ~~~lleeiP~~Yrig~tghS~g~aii~vrGtyfe~k~-p~vdnlv~ 208 (332)
T COG3675 164 EQTLLEEIPQGYRIGITGHSSGGAIICVRGTYFERKY-PRVDNLVV 208 (332)
T ss_pred HHHHHHhcccceEEEEEeecCCccEEEEeccchhccc-CCccccee
Confidence 3444444444 346899999999998644321 111 25666654
No 317
>PRK06193 hypothetical protein; Provisional
Probab=25.13 E-value=98 Score=23.58 Aligned_cols=30 Identities=10% Similarity=0.110 Sum_probs=21.5
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEecch
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFGHST 44 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSm 44 (221)
+.+.+.+++..+|+.+... ...+.++||..
T Consensus 136 ~~~~y~~~l~~~I~~l~~~--~~~vLlVgHnp 165 (206)
T PRK06193 136 RNALLKAGLRPLLTTPPDP--GTNTVLVGHDD 165 (206)
T ss_pred hHHHHHHHHHHHHhhCCCC--CCeEEEEeCch
Confidence 4556677888888877532 34599999995
No 318
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=25.02 E-value=96 Score=20.57 Aligned_cols=41 Identities=17% Similarity=0.178 Sum_probs=26.3
Q ss_pred HHHHHHHhcCCCCCeEEEecchhHHHHHH--Hhc-CCCCCCCccEEE
Q 045548 23 LFVEKVLADNPGLPCFCFGHSTGAAIVLK--AVL-DPKFEANVAGVV 66 (221)
Q Consensus 23 ~~~~~~~~~~~~~p~~l~GhSmGG~ia~~--~a~-~~~~~~~i~~li 66 (221)
..++.+...+|+.+++|+|=|=-.=.-+. ++. +| ++|.++-
T Consensus 53 ~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P---~~i~ai~ 96 (100)
T PF09949_consen 53 DNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFP---GRILAIY 96 (100)
T ss_pred HHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCC---CCEEEEE
Confidence 45667777889999999998854432221 222 34 4787763
No 319
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=24.99 E-value=2.7e+02 Score=21.14 Aligned_cols=58 Identities=12% Similarity=0.020 Sum_probs=35.9
Q ss_pred ccccCCHHHHHHHHHHHHHHH-HhcCCCCCeEEEecc-hhHHHHHHHhcCCCCCCCccEEEEeCC
Q 045548 8 HAYVHSLDAAVKDMKLFVEKV-LADNPGLPCFCFGHS-TGAAIVLKAVLDPKFEANVAGVVLTSP 70 (221)
Q Consensus 8 ~g~~~~~~~~~~dl~~~~~~~-~~~~~~~p~~l~GhS-mGG~ia~~~a~~~~~~~~i~~lil~sp 70 (221)
+|.+++.+.+.+.+...+-.. .....+.++.++|=. +|+.++..++.. .+..+.+...
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~~q~~L~~~~V~ViG~GglGs~ia~~La~~-----Gvg~i~lvD~ 60 (212)
T PRK08644 1 RGEIPSMEEFEAMLASRHTPKLLEKLKKAKVGIAGAGGLGSNIAVALARS-----GVGNLKLVDF 60 (212)
T ss_pred CCccCcHHHHHHHHHhhcCHHHHHHHhCCCEEEECcCHHHHHHHHHHHHc-----CCCeEEEEeC
Confidence 356677777666655432221 222334579999854 888888877753 4677777654
No 320
>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.
Probab=24.98 E-value=83 Score=27.10 Aligned_cols=41 Identities=15% Similarity=0.106 Sum_probs=30.3
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHH
Q 045548 8 HAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI 48 (221)
Q Consensus 8 ~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~i 48 (221)
+||..--..+.+++.+.+++..++....--+++=||+||..
T Consensus 99 ~Gy~~~g~~~~~~~~d~ir~~~E~cd~~~gf~~~~sl~GGt 139 (446)
T cd02189 99 YGYYVHGPQIKEDILDLIRKEVEKCDSFEGFLVLHSLAGGT 139 (446)
T ss_pred ccccccchhhHHHHHHHHHHHHHhCCCccceEEEecCCCCc
Confidence 56643235677788888887777777777899999999865
No 321
>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation.
Probab=24.88 E-value=1.2e+02 Score=23.33 Aligned_cols=48 Identities=17% Similarity=0.125 Sum_probs=27.0
Q ss_pred CCCCCCcccccCCHHHHHH------HHHHHHHHHHhcCCCCCeEEEecchhHHHHHH
Q 045548 1 HGGSDGLHAYVHSLDAAVK------DMKLFVEKVLADNPGLPCFCFGHSTGAAIVLK 51 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~------dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~ 51 (221)
||..+.+...+-+-++|.+ .+..+++.+.. +.++.++|.|+.=-....
T Consensus 143 HG~~~~~~~~VlT~~dY~~~~~~~~~~~~~l~~ll~---~~~~LFiG~S~~D~~i~~ 196 (242)
T cd01406 143 HGDVDDDESIVLTKSDYERYYLKNGWATKFLKSDLE---KYTVLFIGYSLTDPNIRY 196 (242)
T ss_pred ecccCCCCceEecHHHHHHHHhccHHHHHHHHHHHh---cCcEEEEEcCCCCCcHHH
Confidence 6777665444445444443 23444444443 346899999976544443
No 322
>cd06059 Tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-termi
Probab=24.37 E-value=88 Score=26.25 Aligned_cols=41 Identities=17% Similarity=0.201 Sum_probs=28.5
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHH
Q 045548 8 HAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI 48 (221)
Q Consensus 8 ~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~i 48 (221)
.|+...-..+.+++.+.+++..++.+..--+++=|||||..
T Consensus 62 ~G~~~~g~~~~e~~~d~ir~~~E~cD~l~gf~i~~sl~GGT 102 (382)
T cd06059 62 RGYYTIGPELIDEILDRIRKQVEKCDSLQGFQITHSLGGGT 102 (382)
T ss_pred ccccccCHHHHHHHHHHHHHHHHhCCCcCceEEEEecCCCc
Confidence 45433234677777777787777766656788899999854
No 323
>PLN00220 tubulin beta chain; Provisional
Probab=24.37 E-value=87 Score=27.00 Aligned_cols=42 Identities=17% Similarity=0.084 Sum_probs=29.8
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHH
Q 045548 7 LHAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI 48 (221)
Q Consensus 7 ~~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~i 48 (221)
.+|+...-..+.+.+.+.+++........--+++=|||||..
T Consensus 102 a~G~~~~g~~~~~~~~d~ir~~~E~cd~l~gf~~~~sl~GGT 143 (447)
T PLN00220 102 AKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGT 143 (447)
T ss_pred CceeecccHHHHHHHHHHHHHHHHhCcCcCceEEEEecCCCc
Confidence 356654345677777777777777666666889999998754
No 324
>PTZ00387 epsilon tubulin; Provisional
Probab=24.14 E-value=1.1e+02 Score=26.48 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=27.6
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHH
Q 045548 8 HAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI 48 (221)
Q Consensus 8 ~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~i 48 (221)
+|+..--..+.+.+.+.++...++....--+++=|||||..
T Consensus 104 ~G~~~~g~~~~d~~~d~Ir~~~E~cD~l~gf~i~~slgGGT 144 (465)
T PTZ00387 104 VGHMEYGDKYIDSISESVRRQVEQCDSLQSFFLMHSLGGGT 144 (465)
T ss_pred CCcccccHHHHHHHHHHHHHHHHhccCcceEEEEeecCCCc
Confidence 45533235666777777777776665556678899999855
No 325
>PRK10768 ribonucleoside hydrolase RihC; Provisional
Probab=24.03 E-value=1.4e+02 Score=24.09 Aligned_cols=47 Identities=15% Similarity=0.260 Sum_probs=32.9
Q ss_pred HHHHHHHhcCCCCCeEEEecchhHHHHHHHh--cCCCCCCCccEEEEeCCcc
Q 045548 23 LFVEKVLADNPGLPCFCFGHSTGAAIVLKAV--LDPKFEANVAGVVLTSPAV 72 (221)
Q Consensus 23 ~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a--~~~~~~~~i~~lil~sp~~ 72 (221)
+++....+++++ ++.|+ +.|.+.=++.| .+|+..++++.+++++..+
T Consensus 105 ~~i~~~~~~~~~-~itil--a~GPLTNlA~al~~~P~i~~~i~~iviMGG~~ 153 (304)
T PRK10768 105 EAMRDALMNAPE-PVTLV--AIGPLTNIALLLSTYPEVKPYIKRIVLMGGSA 153 (304)
T ss_pred HHHHHHHHhCCC-CEEEE--ECCcHHHHHHHHHHChhhHhhcCEEEEecCCc
Confidence 344444455665 68888 78888766655 4787777899999988664
No 326
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=23.98 E-value=1.4e+02 Score=21.62 Aligned_cols=19 Identities=21% Similarity=0.017 Sum_probs=16.4
Q ss_pred CeEEEecchhHHHHHHHhc
Q 045548 36 PCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~ 54 (221)
+=.+.|-|.|+.++..++.
T Consensus 29 ~d~i~GtSaGAi~aa~~a~ 47 (175)
T cd07228 29 IDIIAGSSIGALVGALYAA 47 (175)
T ss_pred eeEEEEeCHHHHHHHHHHc
Confidence 4679999999999988875
No 327
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=23.97 E-value=1.5e+02 Score=21.11 Aligned_cols=18 Identities=22% Similarity=0.217 Sum_probs=15.7
Q ss_pred CeEEEecchhHHHHHHHh
Q 045548 36 PCFCFGHSTGAAIVLKAV 53 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a 53 (221)
.-++.|-|.|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 467999999999998776
No 328
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=23.91 E-value=1.1e+02 Score=23.66 Aligned_cols=29 Identities=17% Similarity=0.358 Sum_probs=22.5
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEe
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFG 41 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~G 41 (221)
+.+.+.+++..+++.++...|+.+++++|
T Consensus 125 ~~~~~~~~l~~~l~~i~~~~p~a~I~~~g 153 (259)
T cd01823 125 ALDEVGARLKAVLDRIRERAPNARVVVVG 153 (259)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCcEEEEec
Confidence 35677788888888888877777777774
No 329
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=23.86 E-value=1.4e+02 Score=21.58 Aligned_cols=29 Identities=14% Similarity=0.219 Sum_probs=21.5
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEEe
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCFG 41 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~G 41 (221)
+.+.+.+.+..+++.++...++.++++++
T Consensus 86 ~~~~~~~~~~~~i~~~~~~~~~~~ii~~t 114 (199)
T cd01838 86 PLDEYKENLRKIVSHLKSLSPKTKVILIT 114 (199)
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCeEEEeC
Confidence 56778888888888887766666666664
No 330
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=23.72 E-value=1.3e+02 Score=22.72 Aligned_cols=40 Identities=10% Similarity=0.184 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc
Q 045548 15 DAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~ 54 (221)
+..++++..-+-.+..+.++.|++++=+|-||.+...++.
T Consensus 41 ~~~a~~ii~~ll~L~~~~~~~~I~l~INSpGG~v~~g~aI 80 (200)
T CHL00028 41 DEIANQLIGLMVYLSIEDDTKDLYLFINSPGGSVISGLAI 80 (200)
T ss_pred HHHHHHHHHHHHHHhccCCCCCEEEEEeCCCcchhhHHHH
Confidence 3455666666666667777889999999999998766543
No 331
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=23.65 E-value=3.3e+02 Score=20.68 Aligned_cols=23 Identities=13% Similarity=0.299 Sum_probs=8.9
Q ss_pred EEEeecCCCcccChHHHHHHHHH
Q 045548 154 FLLLHGTADTVTDPEASKKLHKY 176 (221)
Q Consensus 154 ~Lii~G~~D~iv~~~~~~~~~~~ 176 (221)
+++|-|..|+..+.+..+++.+.
T Consensus 2 l~~iGGg~~~~~~~~i~~~~~~~ 24 (217)
T cd03145 2 LVLIGGAEDKYDNRAILQRFVAR 24 (217)
T ss_pred EEEEeCCCCCcCHHHHHHHHHHH
Confidence 34444444433333333333333
No 332
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=23.50 E-value=1.2e+02 Score=23.58 Aligned_cols=19 Identities=16% Similarity=0.095 Sum_probs=16.3
Q ss_pred eEEEecchhHHHHHHHhcC
Q 045548 37 CFCFGHSTGAAIVLKAVLD 55 (221)
Q Consensus 37 ~~l~GhSmGG~ia~~~a~~ 55 (221)
=.+.|-|+|++++..++..
T Consensus 33 ~~i~GtSaGAl~aa~~a~~ 51 (246)
T cd07222 33 KRFAGASAGSLVAAVLLTA 51 (246)
T ss_pred CEEEEECHHHHHHHHHhcC
Confidence 3799999999999988753
No 333
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=23.43 E-value=1.3e+02 Score=23.71 Aligned_cols=19 Identities=26% Similarity=0.246 Sum_probs=16.1
Q ss_pred CeEEEecchhHHHHHHHhc
Q 045548 36 PCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~ 54 (221)
+-.+.|-|.|++++..++.
T Consensus 37 ~~~i~G~SAGAl~aa~~a~ 55 (249)
T cd07220 37 ARKIYGASAGALTATALVT 55 (249)
T ss_pred CCeEEEEcHHHHHHHHHHc
Confidence 3568999999999998865
No 334
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=23.42 E-value=56 Score=27.79 Aligned_cols=17 Identities=24% Similarity=0.626 Sum_probs=14.5
Q ss_pred CCCCcEEEeecCCCccc
Q 045548 149 RLKVPFLLLHGTADTVT 165 (221)
Q Consensus 149 ~i~~P~Lii~G~~D~iv 165 (221)
++.+|+++|||.+|.-.
T Consensus 108 ~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 108 NVAIPVFSIHGNHDDPS 124 (405)
T ss_pred cCCCCEEEEcCCCCCcc
Confidence 36899999999999754
No 335
>PRK10443 rihA ribonucleoside hydrolase 1; Provisional
Probab=23.10 E-value=1.4e+02 Score=24.22 Aligned_cols=49 Identities=22% Similarity=0.392 Sum_probs=34.2
Q ss_pred HHHHHHHHhcCCCCCeEEEecchhHHHHHHHh--cCCCCCCCccEEEEeCCccc
Q 045548 22 KLFVEKVLADNPGLPCFCFGHSTGAAIVLKAV--LDPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 22 ~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a--~~~~~~~~i~~lil~sp~~~ 73 (221)
.+++....+++|+ ++.++ ++|.+.-++.| .+|+..++++.+++++..++
T Consensus 105 ~~~i~~~~~~~~~-~itiv--a~GPLTNlA~al~~~P~~~~~i~~iviMGG~~~ 155 (311)
T PRK10443 105 VELMAKTLRESAE-PVTLV--STGPQTNVALLLASHPELHSKIARIVIMGGAMG 155 (311)
T ss_pred HHHHHHHHHhCCC-CeEEE--EccchHHHHHHHHHCchhhhhhCEEEEccCCCC
Confidence 3444444455654 68887 78888877665 47877778999999887653
No 336
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=22.96 E-value=1.7e+02 Score=24.86 Aligned_cols=63 Identities=10% Similarity=-0.003 Sum_probs=44.9
Q ss_pred CCCCcEEEeecCCCcccChHHHHHHHHHcCCCCceEEEcCCcccccCCCCChHHHHHHHHHHHHHhh
Q 045548 149 RLKVPFLLLHGTADTVTDPEASKKLHKYASSADKTMKLYQGFLHDLLFEPERDDIVKDIIDWLCCRV 215 (221)
Q Consensus 149 ~i~~P~Lii~G~~D~iv~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~e~~~~~v~~~i~~fl~~~~ 215 (221)
.+++|+=+-.+..|.+--++.. +.++.++ -......+.+||.-.+| +++.+++++..|++...
T Consensus 402 ~v~vPtg~a~f~~el~~~~~~~--lrdky~n-L~~~s~~~~GGhFaalE-~p~~La~D~~~FV~~~~ 464 (469)
T KOG2565|consen 402 QVRVPTGCARFKFELWHTSDDV--LRDKYPN-LTHSSYHPKGGHFAALE-DPKKLAQDFFSFVEKLN 464 (469)
T ss_pred ccccchhhhccccchhhCcHHH--Hhhhccc-ceeeEeccCCcchhhhh-CcHHHHHHHHHHHHHHH
Confidence 4689999999998865444322 2344443 24566678899987777 57889999999998764
No 337
>cd02187 beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-
Probab=22.95 E-value=1.1e+02 Score=26.12 Aligned_cols=41 Identities=17% Similarity=0.105 Sum_probs=26.8
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHH
Q 045548 8 HAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI 48 (221)
Q Consensus 8 ~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~i 48 (221)
+|+...-..+.+++.+-++...+.....--+++=||+||..
T Consensus 102 ~G~~~~G~~~~e~i~d~ir~~~E~cD~l~gf~~~~sl~GGT 142 (425)
T cd02187 102 KGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSLGGGT 142 (425)
T ss_pred ccchhhcHHHHHHHHHHHHHhhccCCCcceEEEEeecCCCc
Confidence 45543334566666666666666555666788899998644
No 338
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=22.65 E-value=2.4e+02 Score=21.02 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHH
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLK 51 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~ 51 (221)
.+.+++.+.+.++.+++...+.+.+.+++|--.||.+-..
T Consensus 12 is~~~I~~~i~~lA~~I~~~~~~~~~vivgi~~Gg~~fa~ 51 (189)
T PLN02238 12 WTAEDISARVAELAAQIASDYAGKSPVVLGVATGAFMFLA 51 (189)
T ss_pred cCHHHHHHHHHHHHHHHHHHcCCCCcEEEEEccCCHHHHH
Confidence 4677777777878788877776677889999999986544
No 339
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.60 E-value=1.3e+02 Score=23.61 Aligned_cols=18 Identities=28% Similarity=0.355 Sum_probs=15.7
Q ss_pred eEEEecchhHHHHHHHhc
Q 045548 37 CFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 37 ~~l~GhSmGG~ia~~~a~ 54 (221)
-.+.|-|.|++++..++.
T Consensus 34 ~~i~GtSAGAl~aa~~as 51 (252)
T cd07221 34 RMFFGASAGALHCVTFLS 51 (252)
T ss_pred CEEEEEcHHHHHHHHHHh
Confidence 469999999999998864
No 340
>PTZ00335 tubulin alpha chain; Provisional
Probab=22.42 E-value=1e+02 Score=26.67 Aligned_cols=41 Identities=17% Similarity=0.092 Sum_probs=28.2
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHH
Q 045548 8 HAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI 48 (221)
Q Consensus 8 ~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~i 48 (221)
+|+...-..+.+++.+.+++........--+++=||+||..
T Consensus 105 ~Gy~~~G~~~~d~i~d~ir~~~E~cD~l~gf~i~~Sl~GGT 145 (448)
T PTZ00335 105 RGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGT 145 (448)
T ss_pred ccccchhhhHhHHHHHHHHHhHHhccCccceeEeeccCCCc
Confidence 56643345566777777777776665666788999999854
No 341
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=22.34 E-value=1.2e+02 Score=25.08 Aligned_cols=31 Identities=32% Similarity=0.315 Sum_probs=22.0
Q ss_pred CCCCeEEEecchhHHHHHHHhcCCCCCCCccEEEEeC
Q 045548 33 PGLPCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTS 69 (221)
Q Consensus 33 ~~~p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~s 69 (221)
|+-.||++|+|=|+.+|--+|. .|+.+-|++
T Consensus 120 pGD~Iy~FGFSRGAf~aRVlag------mir~vGlls 150 (423)
T COG3673 120 PGDEIYAFGFSRGAFSARVLAG------MIRHVGLLS 150 (423)
T ss_pred CCCeEEEeeccchhHHHHHHHH------HHHHhhhhc
Confidence 4567999999999998866552 355554444
No 342
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=22.29 E-value=2.9e+02 Score=20.03 Aligned_cols=51 Identities=22% Similarity=0.286 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHHHHhc-CCCCCCCccEEEEeCCc
Q 045548 16 AAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVLKAVL-DPKFEANVAGVVLTSPA 71 (221)
Q Consensus 16 ~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a~-~~~~~~~i~~lil~sp~ 71 (221)
...+++.++++.++.+ +.+|+++|=|..|..-+.++. .++ .|+.++=.+|.
T Consensus 52 ~~~~~l~~~L~~~~~~--gk~I~~yGA~~kg~tlln~~g~~~~---~I~~vvD~np~ 103 (160)
T PF08484_consen 52 QSKAELREFLEKLKAE--GKRIAGYGAGAKGNTLLNYFGLDND---LIDYVVDDNPL 103 (160)
T ss_dssp HHHHHHHHHHHHHHHT--T--EEEE---SHHHHHHHHHT--TT---TS--EEES-GG
T ss_pred HHHHHHHHHHHHHHHc--CCEEEEECcchHHHHHHHHhCCCcc---eeEEEEeCChh
Confidence 3344566666666654 456999999999999888763 222 46666655553
No 343
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=22.11 E-value=1.1e+02 Score=26.62 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=25.2
Q ss_pred CeEEEecchhHHHHHHHhcCCCCCCCccEEEEeCCccc
Q 045548 36 PCFCFGHSTGAAIVLKAVLDPKFEANVAGVVLTSPAVG 73 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~~~~~~~~i~~lil~sp~~~ 73 (221)
.++|-|-|||..=|+.++.+- .-.++|+.=|..+
T Consensus 358 qLILSGlSMGTfgAlYYga~l----~P~AIiVgKPL~N 391 (511)
T TIGR03712 358 QLILSGLSMGTFGALYYGAKL----SPHAIIVGKPLVN 391 (511)
T ss_pred HeeeccccccchhhhhhcccC----CCceEEEcCcccc
Confidence 489999999999999886532 2367777667644
No 344
>PTZ00010 tubulin beta chain; Provisional
Probab=22.11 E-value=1e+02 Score=26.52 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=28.9
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHH
Q 045548 8 HAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI 48 (221)
Q Consensus 8 ~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~i 48 (221)
+|+...-..+.+++.+.+++........--+++=||+||..
T Consensus 103 ~G~~~~g~~~~~~i~d~irk~~E~cd~l~gf~i~~Sl~GGT 143 (445)
T PTZ00010 103 KGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGT 143 (445)
T ss_pred cchhhhhHHHHHHHHHHHhhhhhhccCccceEEEeccCCCc
Confidence 56543345667777777777776666667889999998754
No 345
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.01 E-value=64 Score=26.11 Aligned_cols=16 Identities=31% Similarity=0.285 Sum_probs=14.3
Q ss_pred EEEecchhHHHHHHHh
Q 045548 38 FCFGHSTGAAIVLKAV 53 (221)
Q Consensus 38 ~l~GhSmGG~ia~~~a 53 (221)
.+.|-|.||.||+.++
T Consensus 45 li~GTStGgiiA~~l~ 60 (309)
T cd07216 45 LIGGTSTGGLIAIMLG 60 (309)
T ss_pred eeeeccHHHHHHHHhc
Confidence 6899999999998775
No 346
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=21.99 E-value=2.7e+02 Score=19.82 Aligned_cols=28 Identities=14% Similarity=0.210 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCeEEE
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPCFCF 40 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~~l~ 40 (221)
+.+++.+.+..+++.++..+|+.+++++
T Consensus 75 ~~~~~~~~~~~li~~i~~~~p~~~i~~~ 102 (169)
T cd01831 75 PGEDFTNAYVEFIEELRKRYPDAPIVLM 102 (169)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 5678888899999998887777666655
No 347
>cd02654 nuc_hydro_CjNH nuc_hydro_CjNH. Nucleoside hydrolases similar to Campylobacter jejuni nucleoside hydrolase. This group contains eukaryotic and bacterial proteins similar to C. jejuni nucleoside hydrolase. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. C. jejuni nucleoside hydrolase is inactive against natural nucleosides or against common nucleoside analogues.
Probab=21.90 E-value=2.2e+02 Score=23.23 Aligned_cols=46 Identities=17% Similarity=0.329 Sum_probs=31.3
Q ss_pred HHHHHHhcCCCCCeEEEecchhHHHHHHHh--cCCCCCCCccEEEEeCCcc
Q 045548 24 FVEKVLADNPGLPCFCFGHSTGAAIVLKAV--LDPKFEANVAGVVLTSPAV 72 (221)
Q Consensus 24 ~~~~~~~~~~~~p~~l~GhSmGG~ia~~~a--~~~~~~~~i~~lil~sp~~ 72 (221)
++-...+++|+ ++.|+ ++|-+.=+++| .+|+..++|+.+++++..+
T Consensus 119 ~i~~~~~~~p~-~itiv--a~GPLTNlA~al~~~P~~~~~i~~iviMGG~~ 166 (318)
T cd02654 119 FMIEMVRKHPH-EVSIV--AAGPLTNLALALRIDPDFAPLAKELVIMGGYL 166 (318)
T ss_pred HHHHHHHhCCC-ceEEE--ECCcHHHHHHHHHHChhHHHhCCEEEEeCCCc
Confidence 33333445665 68888 67777665554 4787777899999988764
No 348
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=21.74 E-value=2.6e+02 Score=22.01 Aligned_cols=19 Identities=26% Similarity=0.475 Sum_probs=15.9
Q ss_pred HhCCCCCCcEEEeecCCCc
Q 045548 145 RNLNRLKVPFLLLHGTADT 163 (221)
Q Consensus 145 ~~~~~i~~P~Lii~G~~D~ 163 (221)
+.+.++++|+.++.|.+|.
T Consensus 79 ~~l~~l~~Pv~~v~GNHD~ 97 (275)
T PRK11148 79 EGIAPLRKPCVWLPGNHDF 97 (275)
T ss_pred HHHhhcCCcEEEeCCCCCC
Confidence 4466678999999999996
No 349
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=21.55 E-value=1.5e+02 Score=23.93 Aligned_cols=19 Identities=21% Similarity=0.086 Sum_probs=16.8
Q ss_pred CeEEEecchhHHHHHHHhc
Q 045548 36 PCFCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 36 p~~l~GhSmGG~ia~~~a~ 54 (221)
|-++.|-|||+.++..+|.
T Consensus 40 ~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 40 IDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred ccEEEecCHHHHHHHHHHc
Confidence 5689999999999998875
No 350
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=21.17 E-value=1.4e+02 Score=19.90 Aligned_cols=27 Identities=15% Similarity=0.406 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhcCCCCCeEEEecchhH
Q 045548 20 DMKLFVEKVLADNPGLPCFCFGHSTGA 46 (221)
Q Consensus 20 dl~~~~~~~~~~~~~~p~~l~GhSmGG 46 (221)
.....++.+.+..|..|+.++|..-..
T Consensus 55 ~~~~~l~~l~~~~~~~Pvlllg~~~~~ 81 (109)
T PF06490_consen 55 KLAELLKELLKWAPHIPVLLLGEHDSP 81 (109)
T ss_pred hHHHHHHHHHhhCCCCCEEEECCCCcc
Confidence 455677777777888899888765443
No 351
>COG3023 ampD N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=21.14 E-value=86 Score=24.71 Aligned_cols=29 Identities=24% Similarity=0.539 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCC-CeEEEecc
Q 045548 15 DAAVKDMKLFVEKVLADNPGL-PCFCFGHS 43 (221)
Q Consensus 15 ~~~~~dl~~~~~~~~~~~~~~-p~~l~GhS 43 (221)
+..++-+.++++.+..++|++ |--++|||
T Consensus 125 ~AQiqal~~L~k~i~~ryP~I~~~~I~GHs 154 (257)
T COG3023 125 EAQIQALIALLKDIIARYPNITPERIVGHS 154 (257)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHccccc
Confidence 456778899999999999865 45677776
No 352
>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino
Probab=20.91 E-value=1.2e+02 Score=26.11 Aligned_cols=41 Identities=17% Similarity=0.109 Sum_probs=27.6
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHH
Q 045548 8 HAYVHSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAI 48 (221)
Q Consensus 8 ~g~~~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~i 48 (221)
+|+..--..+.+++.+-++...+.....--+++=||+||..
T Consensus 104 ~Gy~~~G~~~~~~i~d~ir~~~E~cD~l~gf~i~~sl~GGT 144 (434)
T cd02186 104 RGHYTIGKEIIDLVLDRIRKLADNCTGLQGFLIFHSFGGGT 144 (434)
T ss_pred cccchhHHHHHHHHHHHHHHHHhcCCCcceeEEEeccCCCc
Confidence 45543234566777777777666665666789999999754
No 353
>PF01645 Glu_synthase: Conserved region in glutamate synthase; InterPro: IPR002932 Ferredoxin-dependent glutamate synthases have been implicated in a number of functions including photorespiration in Arabidopsis where they may also play a role in primary nitrogen assimilation in roots []. This region is expressed as a seperate subunit in the glutamate synthase alpha subunit from archaebacteria, or part of a large multidomain enzyme in other organisms. The aligned region of these proteins contains a putative FMN binding site and Fe-S cluster.; GO: 0015930 glutamate synthase activity, 0016638 oxidoreductase activity, acting on the CH-NH2 group of donors, 0006537 glutamate biosynthetic process, 0055114 oxidation-reduction process; PDB: 1EA0_A 2VDC_E 1OFE_A 1LLW_A 1OFD_A 1LLZ_A 1LM1_A.
Probab=20.82 E-value=1.3e+02 Score=25.26 Aligned_cols=22 Identities=27% Similarity=0.510 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhcCCCCCeEE
Q 045548 18 VKDMKLFVEKVLADNPGLPCFC 39 (221)
Q Consensus 18 ~~dl~~~~~~~~~~~~~~p~~l 39 (221)
.+|+.++++.++...++.||.+
T Consensus 187 ~edl~~~I~~Lr~~~~~~pVgv 208 (368)
T PF01645_consen 187 IEDLAQLIEELRELNPGKPVGV 208 (368)
T ss_dssp HHHHHHHHHHHHHH-TTSEEEE
T ss_pred HHHHHHHHHHHHhhCCCCcEEE
Confidence 5789999999999888887654
No 354
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=20.78 E-value=1.6e+02 Score=23.23 Aligned_cols=25 Identities=16% Similarity=0.409 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCe
Q 045548 13 SLDAAVKDMKLFVEKVLADNPGLPC 37 (221)
Q Consensus 13 ~~~~~~~dl~~~~~~~~~~~~~~p~ 37 (221)
++++..+|+..+++.++..+|+.++
T Consensus 146 s~~ei~~~l~~~~~~l~~~nP~~ki 170 (251)
T PF08885_consen 146 SVEEILEDLEAIIDLLRSINPDIKI 170 (251)
T ss_pred CHHHHHHHHHHHHHHHHhhCCCceE
Confidence 6788888888888888776665544
No 355
>cd04121 Rab40 Rab40 subfamily. This subfamily contains Rab40a, Rab40b, and Rab40c, which are all highly homologous. In rat, Rab40c is localized to the perinuclear recycling compartment (PRC), and is distributed in a tissue-specific manor, with high expression in brain, heart, kidney, and testis, low expression in lung and liver, and no expression in spleen and skeletal muscle. Rab40c is highly expressed in differentiated oligodendrocytes but minimally expressed in oligodendrocyte progenitors, suggesting a role in the vesicular transport of myelin components. Unlike most other Ras-superfamily proteins, Rab40c was shown to have a much lower affinity for GTP, and an affinity for GDP that is lower than for GTP. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide d
Probab=20.71 E-value=1.9e+02 Score=21.38 Aligned_cols=25 Identities=16% Similarity=0.506 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEe
Q 045548 17 AVKDMKLFVEKVLADNPGLPCFCFG 41 (221)
Q Consensus 17 ~~~dl~~~~~~~~~~~~~~p~~l~G 41 (221)
-.+.+..|++.+....++.|++|+|
T Consensus 93 Sf~~~~~w~~~i~~~~~~~piilVG 117 (189)
T cd04121 93 SFDGIDRWIKEIDEHAPGVPKILVG 117 (189)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 3455667777776666788999998
No 356
>PF02044 Bombesin: Bombesin-like peptide; InterPro: IPR000874 Bombesin-like peptides comprise a large family of peptides which were initially isolated from amphibian skin, where they stimulate smooth muscle contraction. They were later found to be widely distributed in mammalian neural and endocrine cells. The amphibian peptides which belong to this family are currently classified into three subfamilies [, ]; the Bombesin group, which includes bombesin and alytesin; the Ranatensin group, which includes ranatensins, litorin, and Rohdei litorin; and the Phyllolitorin group, which includes Leu(8)- and Phe(8)-phyllolitorins. In mammals and birds two categories of bombesin-like peptides are known [, ], gastrin-releasing peptide (GRP), which stimulates the release of gastrin as well as other gastrointestinal hormones, and neuromedin B (NMB), a neuropeptide whose function is not yet clear. Bombesin-like peptides, like many other active peptides, are synthesized as larger protein precursors that are enzymatically converted to their mature forms. The final peptides are eight to fourteen residues long.; GO: 0007218 neuropeptide signaling pathway; PDB: 1C9A_A 1C98_A.
Probab=20.31 E-value=21 Score=14.35 Aligned_cols=7 Identities=43% Similarity=0.781 Sum_probs=3.1
Q ss_pred EEecchh
Q 045548 39 CFGHSTG 45 (221)
Q Consensus 39 l~GhSmG 45 (221)
.+||=||
T Consensus 5 AvGh~Mg 11 (14)
T PF02044_consen 5 AVGHFMG 11 (14)
T ss_dssp HHHCT--
T ss_pred ceeeeec
Confidence 4577666
No 357
>PF03629 DUF303: Domain of unknown function (DUF303) ; InterPro: IPR005181 This domain is associated with proteins from viruses, bacteria and eukaryotes. In the latter two taxonomic groups some of the proteins are annotated as either sialic acid-specific 9-O-acetylesterase (3.1.1.53 from EC) or acetylxylan esterase related enzyme. The function of this domain is unknown.; PDB: 3PT5_A 2APJ_C 1ZMB_D.
Probab=20.29 E-value=1.4e+02 Score=23.28 Aligned_cols=36 Identities=33% Similarity=0.305 Sum_probs=20.5
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHhcC--CCCCeEEEec
Q 045548 1 HGGSDGLHAYVHSLDAAVKDMKLFVEKVLADN--PGLPCFCFGH 42 (221)
Q Consensus 1 hG~S~~~~g~~~~~~~~~~dl~~~~~~~~~~~--~~~p~~l~Gh 42 (221)
+|+|+. ... .|.+.+..+++.++.+. +++|++++.-
T Consensus 151 QGEsD~-~~~-----~Y~~~l~~li~~~R~~~~~~~lPf~~~ql 188 (255)
T PF03629_consen 151 QGESDA-NAE-----AYRELLKALIEDWRADWGDPDLPFVIGQL 188 (255)
T ss_dssp --GGGS-SCT-----CHHHHHHHHHHHHHHHTT-TTS-EEEEE-
T ss_pred CCCCCC-CHH-----HHHHHHHHHHHHHHHHcCCCCCCEEEEEe
Confidence 466666 211 56667777777777665 5788777643
No 358
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=20.20 E-value=85 Score=24.96 Aligned_cols=54 Identities=24% Similarity=0.345 Sum_probs=33.4
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCeEEEecchhHHHHH----HHhcCCCCCCCccEEEEeCCc
Q 045548 12 HSLDAAVKDMKLFVEKVLADNPGLPCFCFGHSTGAAIVL----KAVLDPKFEANVAGVVLTSPA 71 (221)
Q Consensus 12 ~~~~~~~~dl~~~~~~~~~~~~~~p~~l~GhSmGG~ia~----~~a~~~~~~~~i~~lil~sp~ 71 (221)
.++++.++.+.++.+......|+ ++++.| ||-|+. .+.++. ...+.|.+-.|++
T Consensus 192 ~sl~~a~~~~~~i~~aa~~v~~d--ii~l~h--GGPI~~p~D~~~~l~~--t~~~~Gf~G~Ss~ 249 (268)
T PF09370_consen 192 LSLEEAAERIQEIFDAARAVNPD--IIVLCH--GGPIATPEDAQYVLRN--TKGIHGFIGASSM 249 (268)
T ss_dssp --HHHHHHHHHHHHHHHHCC-TT---EEEEE--CTTB-SHHHHHHHHHH---TTEEEEEESTTT
T ss_pred CCHHHHHHHHHHHHHHHHHhCCC--eEEEEe--CCCCCCHHHHHHHHhc--CCCCCEEecccch
Confidence 47888888888888888777766 678878 888863 222211 1137887776665
No 359
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.17 E-value=83 Score=24.59 Aligned_cols=17 Identities=41% Similarity=0.507 Sum_probs=14.9
Q ss_pred EEEecchhHHHHHHHhc
Q 045548 38 FCFGHSTGAAIVLKAVL 54 (221)
Q Consensus 38 ~l~GhSmGG~ia~~~a~ 54 (221)
.+.|-|.||.+|+.++.
T Consensus 37 ~i~GtS~G~iia~~l~~ 53 (258)
T cd07199 37 LIAGTSTGGIIALGLAL 53 (258)
T ss_pred eeeeccHHHHHHHHHhc
Confidence 58999999999998764
Done!