BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045551
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3UMR5|MCU_MOUSE Calcium uniporter protein, mitochondrial OS=Mus musculus GN=Mcu
PE=2 SV=2
Length = 350
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%)
Query: 21 RKELEKMEMQKAIIDQKAKAQVRGELYFGLGFLMVQTLGFMRLTFWELSWDVMEPICFFV 80
+++L +E + I +KA+ + L+ GL ++ Q RLT+WE SWD+MEP+ +F+
Sbjct: 210 KQQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWWEYSWDIMEPVTYFI 269
Query: 81 SSLDFALAYGFFLRTSTEPTFEGYFHRRFKSRQNKLMRAHNFDEEKYNHLR 131
+ Y +F+ T E + R++ +K + FD EKYN L+
Sbjct: 270 TYGSAMAMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKKSRFDLEKYNQLK 320
>sp|Q8NE86|MCU_HUMAN Calcium uniporter protein, mitochondrial OS=Homo sapiens GN=MCU
PE=1 SV=1
Length = 351
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%)
Query: 21 RKELEKMEMQKAIIDQKAKAQVRGELYFGLGFLMVQTLGFMRLTFWELSWDVMEPICFFV 80
+++L +E + I +KA+ + L+ GL ++ Q RLT+WE SWD+MEP+ +F+
Sbjct: 211 KEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWWEYSWDIMEPVTYFI 270
Query: 81 SSLDFALAYGFFLRTSTEPTFEGYFHRRFKSRQNKLMRAHNFDEEKYNHLR 131
+ Y +F+ T E + R++ +K + FD EKYN L+
Sbjct: 271 TYGSAMAMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKKSRFDLEKYNQLK 321
>sp|Q08BI9|MCU_DANRE Calcium uniporter protein, mitochondrial OS=Danio rerio GN=mcu PE=2
SV=1
Length = 376
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%)
Query: 23 ELEKMEMQKAIIDQKAKAQVRGELYFGLGFLMVQTLGFMRLTFWELSWDVMEPICFFVSS 82
+L+ +E K + +KA+ + L+ G+ ++ Q RLT+WE SWD+MEP+ +F++
Sbjct: 237 QLQPLEKVKEELSKKAERRTTWVLWGGMAYMATQFGILARLTWWEYSWDIMEPVTYFITY 296
Query: 83 LDFALAYGFFLRTSTEPTFEGYFHRRFKSRQNKLMRAHNFDEEKYNHLRKLFYPA 137
Y +F+ T E + R++ ++ + FD EKYN L+ A
Sbjct: 297 GTAMAMYAYFVLTRQEYLYPDARDRQYLLFFHRGAKRTRFDIEKYNKLKDAIAEA 351
>sp|Q9NWR8|C109B_HUMAN Coiled-coil domain-containing protein 109B OS=Homo sapiens
GN=CCDC109B PE=2 SV=2
Length = 336
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 68/123 (55%)
Query: 18 DPRRKELEKMEMQKAIIDQKAKAQVRGELYFGLGFLMVQTLGFMRLTFWELSWDVMEPIC 77
D +++L+ +E KA I+ ++A+ G L+ GL L +Q LT+W SWD+MEP+
Sbjct: 193 DHLKEQLQPLEQVKAGIEAHSEAKTSGLLWAGLALLSIQGGALAWLTWWVYSWDIMEPVT 252
Query: 78 FFVSSLDFALAYGFFLRTSTEPTFEGYFHRRFKSRQNKLMRAHNFDEEKYNHLRKLFYPA 137
+F++ + + + +F+ T + T+ R+F +K + +FD ++YN L++ A
Sbjct: 253 YFITFANSMVFFAYFIVTRQDYTYSAVKSRQFLQFFHKKSKQQHFDVQQYNKLKEDLAKA 312
Query: 138 PEG 140
E
Sbjct: 313 KES 315
>sp|Q810S1|C109B_MOUSE Coiled-coil domain-containing protein 109B OS=Mus musculus
GN=Ccdc109b PE=2 SV=1
Length = 345
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%)
Query: 18 DPRRKELEKMEMQKAIIDQKAKAQVRGELYFGLGFLMVQTLGFMRLTFWELSWDVMEPIC 77
D +++L +E KA I+ +++A G L+ GL L VQ LT+W SWD+MEP+
Sbjct: 202 DHLQEQLRPLEQVKAAIEARSEANTSGLLWAGLALLSVQGGALAWLTWWVYSWDIMEPVT 261
Query: 78 FFVSSLDFALAYGFFLRTSTEPTFEGYFHRRFKSRQNKLMRAHNFDEEKYNHLRKLFYPA 137
FF+S + + + +F+ T T+ R+F +K + FD E+YN L++ A
Sbjct: 262 FFLSFANSIVFFAYFIITRQNYTYSSLRSRQFLQFFHKKSQRRCFDVEQYNKLKEDLAEA 321
Query: 138 PEG 140
E
Sbjct: 322 TES 324
>sp|Q6R5J2|DISP1_DANRE Protein dispatched homolog 1 OS=Danio rerio GN=disp1 PE=2 SV=1
Length = 1464
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 57 TLGFMRLTFWELSWDVMEPICFFVS---SLDFALAYGFFLRTSTEPTFEG 103
T+G + L WEL +V+E + V+ S+DFA+ YG R + EP EG
Sbjct: 1005 TVGSLVLLGWEL--NVLESVTISVAVGLSVDFAVHYGVAYRLAPEPDREG 1052
>sp|Q3TDN0|DISP1_MOUSE Protein dispatched homolog 1 OS=Mus musculus GN=Disp1 PE=1 SV=2
Length = 1521
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 13/74 (17%)
Query: 33 IIDQKAKAQVRGELYFGLGFLMVQTLGFMRLTFWELSWDVMEPICFFVS---SLDFALAY 89
II A + G ++ +G L++ LG WEL +V+E + V+ S+DFA+ Y
Sbjct: 1005 IISLYAIVSIAGTIFVTVGSLVL--LG------WEL--NVLESVTISVAVGLSVDFAVHY 1054
Query: 90 GFFLRTSTEPTFEG 103
G R + +P EG
Sbjct: 1055 GVAYRLAPDPDREG 1068
>sp|Q8C9E8|FA26F_MOUSE Protein FAM26F OS=Mus musculus GN=Fam26f PE=1 SV=1
Length = 313
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 12/66 (18%)
Query: 16 PNDPRRKELEKMEMQKAIIDQKAKAQVRGELYFG---LGFLMVQTL-------GFMRLTF 65
P P K+ K+EMQ+ + KA++QV G + + L+V+++ +++L F
Sbjct: 150 PQAPCNKQ--KVEMQEILSQLKAQSQVFGWILIAAVIILLLLVKSVTRCFSPVSYLQLKF 207
Query: 66 WELSWD 71
WE+ W+
Sbjct: 208 WEIYWE 213
>sp|Q96F81|DISP1_HUMAN Protein dispatched homolog 1 OS=Homo sapiens GN=DISP1 PE=2 SV=3
Length = 1524
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 57 TLGFMRLTFWELSWDVMEPICFFVS---SLDFALAYGFFLRTSTEPTFEG 103
T+G + L WEL +V+E + V+ S+DFA+ YG R + +P EG
Sbjct: 1023 TVGSLVLLGWEL--NVLESVTISVAVGLSVDFAVHYGVAYRLAPDPDREG 1070
>sp|Q6ANN6|NUON_DESPS NADH-quinone oxidoreductase subunit N OS=Desulfotalea psychrophila
(strain LSv54 / DSM 12343) GN=nuoN PE=3 SV=1
Length = 470
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 50 LGFLMVQTLGFMRLTFWELSWDVMEPICFFVSSL 83
LG L+ + +G+ F+ L++ +M CFFV SL
Sbjct: 304 LGVLVFENMGYRNAIFYTLAYVLMNIACFFVVSL 337
>sp|P80193|BODG_PSESK Gamma-butyrobetaine dioxygenase OS=Pseudomonas sp. (strain AK-1)
PE=1 SV=1
Length = 383
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 12/64 (18%)
Query: 84 DFALAYGFFLRTSTEPTFEGYFHRRFKSRQNKLMRAHNFDEEKYNHLRKLFYPAP----- 138
D+ LAY F++ + EP F F RR ++ Q FD + H R F PA
Sbjct: 312 DYYLAYRRFIQMTREPRF--CFTRRLEAGQ-----LWCFDNRRVLHARDAFDPASGDRHF 364
Query: 139 EGCY 142
+GCY
Sbjct: 365 QGCY 368
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,882,828
Number of Sequences: 539616
Number of extensions: 2194528
Number of successful extensions: 6271
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6264
Number of HSP's gapped (non-prelim): 11
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)