Query 045553
Match_columns 1082
No_of_seqs 1037 out of 7315
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 03:15:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045553.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045553hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2E-106 5E-111 1045.8 72.0 914 1-1080 31-954 (968)
2 PLN00113 leucine-rich repeat r 100.0 9.9E-56 2.1E-60 572.8 37.7 513 109-698 68-586 (968)
3 KOG1187 Serine/threonine prote 100.0 4.8E-51 1E-55 458.0 28.3 291 787-1079 61-354 (361)
4 KOG0192 Tyrosine kinase specif 100.0 5.7E-44 1.2E-48 397.1 25.8 256 803-1079 43-305 (362)
5 KOG0581 Mitogen-activated prot 100.0 7.9E-43 1.7E-47 366.2 19.8 249 804-1073 82-335 (364)
6 KOG0197 Tyrosine kinases [Sign 100.0 7.7E-43 1.7E-47 384.0 20.3 256 803-1080 208-464 (468)
7 KOG0575 Polo-like serine/threo 100.0 6.1E-42 1.3E-46 379.7 23.9 248 801-1073 18-269 (592)
8 KOG0595 Serine/threonine-prote 100.0 5.5E-42 1.2E-46 362.1 22.3 200 799-1005 8-216 (429)
9 KOG0591 NIMA (never in mitosis 100.0 2.7E-43 5.9E-48 352.2 11.2 256 801-1074 19-282 (375)
10 KOG0615 Serine/threonine prote 100.0 1.3E-42 2.8E-47 365.6 15.5 253 800-1073 171-437 (475)
11 KOG0196 Tyrosine kinase, EPH ( 100.0 7.9E-42 1.7E-46 383.6 12.7 269 789-1079 608-893 (996)
12 KOG0598 Ribosomal protein S6 k 100.0 1.3E-40 2.8E-45 349.6 18.9 242 800-1065 24-269 (357)
13 KOG0472 Leucine-rich repeat pr 100.0 1.9E-44 4E-49 376.3 -12.5 494 110-676 45-541 (565)
14 KOG1026 Nerve growth factor re 100.0 4.2E-40 9.2E-45 379.4 19.6 256 802-1078 487-763 (774)
15 KOG4194 Membrane glycoprotein 100.0 1.1E-41 2.3E-46 370.4 4.0 396 93-710 67-465 (873)
16 KOG0661 MAPK related serine/th 100.0 6.7E-40 1.5E-44 351.1 14.5 260 799-1073 8-291 (538)
17 KOG0198 MEKK and related serin 100.0 2.9E-39 6.2E-44 347.6 19.0 256 801-1076 17-279 (313)
18 KOG0593 Predicted protein kina 100.0 5.8E-39 1.2E-43 324.5 16.7 259 801-1072 2-283 (396)
19 KOG0193 Serine/threonine prote 100.0 2.5E-39 5.4E-44 356.2 14.9 266 793-1079 384-655 (678)
20 KOG0578 p21-activated serine/t 100.0 7.5E-39 1.6E-43 352.3 18.5 250 801-1073 273-523 (550)
21 KOG0582 Ste20-like serine/thre 100.0 3.1E-38 6.7E-43 335.7 22.3 261 801-1073 26-293 (516)
22 KOG0592 3-phosphoinositide-dep 100.0 1.3E-38 2.9E-43 346.5 19.3 252 798-1073 70-338 (604)
23 KOG0597 Serine-threonine prote 100.0 1.6E-38 3.5E-43 344.8 16.5 247 801-1073 2-251 (808)
24 KOG0659 Cdk activating kinase 100.0 1.7E-37 3.8E-42 309.1 20.4 260 801-1073 2-281 (318)
25 KOG3653 Transforming growth fa 100.0 4.3E-37 9.4E-42 329.3 24.2 268 801-1079 210-505 (534)
26 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.6E-37 5.7E-42 352.3 23.6 261 800-1080 6-337 (338)
27 KOG0600 Cdc2-related protein k 100.0 1.5E-37 3.2E-42 335.7 20.0 260 801-1072 117-399 (560)
28 KOG4721 Serine/threonine prote 100.0 1.5E-38 3.2E-43 344.3 12.3 240 806-1077 129-368 (904)
29 KOG0583 Serine/threonine prote 100.0 4.7E-37 1E-41 345.6 24.5 248 799-1071 15-273 (370)
30 KOG0616 cAMP-dependent protein 100.0 1.6E-37 3.6E-42 313.8 18.5 236 801-1064 44-283 (355)
31 KOG0194 Protein tyrosine kinas 100.0 1.1E-37 2.4E-42 349.8 18.6 257 802-1080 158-423 (474)
32 KOG0588 Serine/threonine prote 100.0 2.6E-37 5.6E-42 342.9 18.7 247 801-1073 12-263 (786)
33 PHA02988 hypothetical protein; 100.0 1.9E-36 4.1E-41 335.4 25.4 246 807-1078 26-280 (283)
34 KOG0605 NDR and related serine 100.0 5.2E-37 1.1E-41 334.9 20.3 253 799-1072 139-444 (550)
35 KOG1095 Protein tyrosine kinas 100.0 3.7E-37 8E-42 368.3 20.1 257 802-1079 693-963 (1025)
36 KOG0580 Serine/threonine prote 100.0 2.7E-37 5.8E-42 303.6 14.7 249 800-1073 21-273 (281)
37 KOG2345 Serine/threonine prote 100.0 2.9E-37 6.3E-42 304.4 14.5 261 800-1078 20-301 (302)
38 KOG0611 Predicted serine/threo 100.0 3.5E-37 7.5E-42 321.3 15.7 248 800-1074 52-304 (668)
39 KOG1094 Discoidin domain recep 100.0 1.2E-36 2.7E-41 331.3 20.6 260 801-1077 538-804 (807)
40 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.8E-36 3.8E-41 333.1 22.1 255 801-1077 5-265 (266)
41 cd05072 PTKc_Lyn Catalytic dom 100.0 2.4E-36 5.1E-41 331.3 22.0 256 800-1077 5-261 (261)
42 KOG0472 Leucine-rich repeat pr 100.0 1E-41 2.3E-46 355.8 -19.3 473 102-656 60-544 (565)
43 KOG1989 ARK protein kinase fam 100.0 1.8E-36 3.9E-41 351.7 22.0 258 801-1080 37-314 (738)
44 KOG0201 Serine/threonine prote 100.0 1.3E-37 2.9E-42 331.3 11.2 249 801-1073 13-263 (467)
45 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7.7E-36 1.7E-40 326.1 24.9 252 801-1075 4-256 (256)
46 KOG2052 Activin A type IB rece 100.0 1.8E-35 3.9E-40 314.5 26.1 265 801-1079 211-505 (513)
47 cd05052 PTKc_Abl Catalytic dom 100.0 4.6E-36 9.9E-41 329.3 22.6 255 801-1077 6-262 (263)
48 cd05068 PTKc_Frk_like Catalyti 100.0 5.1E-36 1.1E-40 328.6 22.7 256 800-1077 5-261 (261)
49 PF07714 Pkinase_Tyr: Protein 100.0 3.6E-36 7.7E-41 329.0 21.4 249 805-1074 3-259 (259)
50 cd05631 STKc_GRK4 Catalytic do 100.0 7.7E-36 1.7E-40 331.4 24.2 252 802-1073 1-261 (285)
51 cd05096 PTKc_DDR1 Catalytic do 100.0 1.3E-35 2.8E-40 333.1 25.6 262 801-1076 5-304 (304)
52 cd05104 PTKc_Kit Catalytic dom 100.0 8.7E-36 1.9E-40 343.4 24.3 258 800-1077 34-374 (375)
53 cd05148 PTKc_Srm_Brk Catalytic 100.0 3E-36 6.4E-41 330.5 19.4 257 799-1077 4-261 (261)
54 KOG0694 Serine/threonine prote 100.0 1.9E-36 4.1E-41 339.6 17.7 242 800-1067 367-613 (694)
55 cd05106 PTKc_CSF-1R Catalytic 100.0 4.3E-36 9.3E-41 345.5 20.2 259 800-1078 37-373 (374)
56 KOG4194 Membrane glycoprotein 100.0 1E-37 2.2E-42 339.5 6.0 295 91-412 83-378 (873)
57 cd05612 STKc_PRKX_like Catalyt 100.0 8.2E-36 1.8E-40 332.2 21.1 245 801-1073 1-254 (291)
58 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-35 2.8E-40 324.3 21.9 252 801-1075 4-256 (256)
59 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2E-35 4.2E-40 323.8 23.0 253 801-1076 6-259 (260)
60 KOG4278 Protein tyrosine kinas 100.0 1.3E-36 2.8E-41 331.5 13.3 261 798-1080 264-526 (1157)
61 cd05048 PTKc_Ror Catalytic Dom 100.0 1.8E-35 3.9E-40 328.4 22.1 256 801-1077 5-283 (283)
62 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.3E-35 1.1E-39 337.4 26.5 260 800-1079 36-399 (400)
63 PHA03212 serine/threonine kina 100.0 2.6E-35 5.7E-40 339.9 23.8 262 800-1073 91-376 (391)
64 KOG0663 Protein kinase PITSLRE 100.0 1.3E-35 2.9E-40 304.3 18.7 262 799-1073 74-361 (419)
65 cd05071 PTKc_Src Catalytic dom 100.0 3.2E-35 6.9E-40 322.4 23.0 255 800-1077 5-260 (262)
66 cd07848 STKc_CDKL5 Catalytic d 100.0 3.3E-35 7.3E-40 327.0 23.0 264 801-1073 1-284 (287)
67 cd05094 PTKc_TrkC Catalytic do 100.0 3E-35 6.5E-40 327.9 22.4 260 801-1081 5-286 (291)
68 cd05033 PTKc_EphR Catalytic do 100.0 3.2E-35 7E-40 323.2 22.3 255 801-1077 4-265 (266)
69 cd06649 PKc_MEK2 Catalytic dom 100.0 8.8E-35 1.9E-39 330.0 26.3 262 801-1074 5-302 (331)
70 cd05059 PTKc_Tec_like Catalyti 100.0 3.6E-35 7.7E-40 320.9 22.1 250 802-1074 5-255 (256)
71 cd05571 STKc_PKB Catalytic dom 100.0 1.8E-35 3.9E-40 334.4 20.4 242 807-1073 1-251 (323)
72 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.2E-35 4.8E-40 335.5 21.2 253 801-1073 1-257 (333)
73 PTZ00263 protein kinase A cata 100.0 1.8E-35 4E-40 335.1 20.4 245 801-1073 18-271 (329)
74 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.9E-35 8.5E-40 321.4 22.2 254 800-1076 5-259 (260)
75 KOG0660 Mitogen-activated prot 100.0 9.3E-36 2E-40 311.6 15.7 261 799-1073 20-310 (359)
76 KOG0589 Serine/threonine prote 100.0 1.1E-35 2.4E-40 327.0 16.9 251 801-1073 4-258 (426)
77 PTZ00267 NIMA-related protein 100.0 9.1E-35 2E-39 345.0 26.0 250 802-1072 68-322 (478)
78 cd05069 PTKc_Yes Catalytic dom 100.0 9.7E-35 2.1E-39 318.2 24.0 253 801-1076 6-259 (260)
79 cd05093 PTKc_TrkB Catalytic do 100.0 5.3E-35 1.1E-39 325.4 22.1 259 800-1079 4-281 (288)
80 cd05054 PTKc_VEGFR Catalytic d 100.0 2.9E-35 6.3E-40 334.0 20.3 260 801-1080 7-336 (337)
81 cd05049 PTKc_Trk Catalytic dom 100.0 4.4E-35 9.6E-40 324.8 21.2 255 801-1076 5-280 (280)
82 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 9.8E-35 2.1E-39 322.7 23.9 265 801-1078 4-284 (284)
83 PTZ00426 cAMP-dependent protei 100.0 3.9E-35 8.5E-40 332.9 21.0 246 800-1073 29-284 (340)
84 KOG0585 Ca2+/calmodulin-depend 100.0 3.7E-35 8E-40 314.0 19.0 255 798-1075 94-374 (576)
85 cd05585 STKc_YPK1_like Catalyt 100.0 3.9E-35 8.4E-40 330.1 20.4 239 809-1072 1-246 (312)
86 cd05034 PTKc_Src_like Catalyti 100.0 8.7E-35 1.9E-39 318.8 22.7 255 800-1076 5-260 (261)
87 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.1E-35 1.5E-39 323.6 21.9 267 803-1078 6-282 (283)
88 cd07862 STKc_CDK6 Catalytic do 100.0 1.4E-34 3.1E-39 322.5 24.5 261 801-1072 1-286 (290)
89 cd08228 STKc_Nek6 Catalytic do 100.0 2.4E-34 5.2E-39 316.5 25.9 259 801-1078 2-266 (267)
90 cd05108 PTKc_EGFR Catalytic do 100.0 6E-35 1.3E-39 329.4 21.6 256 801-1079 7-270 (316)
91 KOG0658 Glycogen synthase kina 100.0 1E-35 2.2E-40 311.9 13.9 258 802-1073 25-306 (364)
92 cd05090 PTKc_Ror1 Catalytic do 100.0 7.7E-35 1.7E-39 323.3 22.0 255 801-1076 5-282 (283)
93 cd05595 STKc_PKB_beta Catalyti 100.0 6.6E-35 1.4E-39 329.6 21.7 242 807-1073 1-251 (323)
94 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.6E-34 3.6E-39 321.3 24.1 262 801-1073 5-285 (288)
95 cd05062 PTKc_IGF-1R Catalytic 100.0 1.9E-34 4.1E-39 319.1 24.5 257 799-1076 4-277 (277)
96 cd05614 STKc_MSK2_N N-terminal 100.0 7.9E-35 1.7E-39 330.9 21.9 252 802-1073 1-267 (332)
97 cd05601 STKc_CRIK Catalytic do 100.0 3E-35 6.6E-40 334.0 17.9 253 801-1073 1-263 (330)
98 KOG0033 Ca2+/calmodulin-depend 100.0 2.6E-36 5.6E-41 296.0 7.7 253 799-1073 9-267 (355)
99 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-34 4.2E-39 327.1 24.3 199 800-1005 4-204 (333)
100 cd05618 STKc_aPKC_iota Catalyt 100.0 1.1E-34 2.3E-39 328.7 22.1 251 807-1073 1-262 (329)
101 cd05593 STKc_PKB_gamma Catalyt 100.0 8.3E-35 1.8E-39 329.4 21.2 242 807-1073 1-251 (328)
102 cd05596 STKc_ROCK Catalytic do 100.0 5.8E-35 1.3E-39 335.8 20.1 254 799-1073 41-304 (370)
103 cd05085 PTKc_Fer Catalytic dom 100.0 1.7E-34 3.7E-39 314.3 22.8 247 807-1075 1-249 (250)
104 PTZ00283 serine/threonine prot 100.0 1.5E-34 3.4E-39 342.8 24.3 255 798-1073 29-297 (496)
105 cd05073 PTKc_Hck Catalytic dom 100.0 1.5E-34 3.3E-39 316.7 22.4 254 800-1076 5-259 (260)
106 cd05588 STKc_aPKC Catalytic do 100.0 1.3E-34 2.7E-39 328.2 22.3 251 807-1073 1-262 (329)
107 cd05111 PTK_HER3 Pseudokinase 100.0 1.7E-34 3.7E-39 319.7 22.9 256 801-1079 7-270 (279)
108 KOG4257 Focal adhesion tyrosin 100.0 4.6E-35 1E-39 320.5 17.9 254 803-1079 391-651 (974)
109 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.9E-34 6.2E-39 321.9 24.9 260 800-1072 4-287 (303)
110 cd05039 PTKc_Csk_like Catalyti 100.0 2E-34 4.3E-39 315.0 22.9 251 800-1077 5-256 (256)
111 cd05045 PTKc_RET Catalytic dom 100.0 1.7E-34 3.7E-39 321.7 22.7 258 802-1080 1-289 (290)
112 cd05605 STKc_GRK4_like Catalyt 100.0 2.3E-34 4.9E-39 319.6 23.3 252 802-1073 1-261 (285)
113 cd05084 PTKc_Fes Catalytic dom 100.0 1.7E-34 3.8E-39 314.7 21.7 248 807-1076 1-252 (252)
114 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.4E-34 9.6E-39 314.3 25.1 259 801-1079 2-267 (267)
115 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.5E-34 5.3E-39 328.1 23.7 260 802-1073 1-290 (338)
116 cd08529 STKc_FA2-like Catalyti 100.0 5.2E-34 1.1E-38 311.6 25.0 250 802-1073 1-253 (256)
117 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.1E-35 1.5E-39 334.2 19.0 252 801-1073 1-285 (350)
118 cd05055 PTKc_PDGFR Catalytic d 100.0 5E-34 1.1E-38 319.5 25.4 258 800-1077 34-301 (302)
119 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.1E-34 1.5E-38 312.9 26.0 255 801-1077 5-267 (268)
120 cd05621 STKc_ROCK2 Catalytic d 100.0 1.3E-34 2.8E-39 332.5 20.8 254 799-1073 41-304 (370)
121 KOG0594 Protein kinase PCTAIRE 100.0 1E-34 2.2E-39 305.7 18.2 265 802-1078 12-309 (323)
122 cd05092 PTKc_TrkA Catalytic do 100.0 1.9E-34 4.1E-39 319.5 21.4 255 801-1076 5-280 (280)
123 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.4E-34 7.4E-39 322.0 23.6 259 801-1080 18-302 (307)
124 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.3E-34 4.9E-39 318.5 21.8 257 799-1076 4-277 (277)
125 cd05584 STKc_p70S6K Catalytic 100.0 2.2E-34 4.9E-39 325.5 22.2 242 807-1073 2-256 (323)
126 cd05035 PTKc_Axl_like Catalyti 100.0 7.1E-34 1.5E-38 313.8 25.7 254 803-1077 1-272 (273)
127 cd05053 PTKc_FGFR Catalytic do 100.0 1.3E-34 2.8E-39 323.3 20.0 259 799-1078 10-292 (293)
128 cd05082 PTKc_Csk Catalytic dom 100.0 7.3E-34 1.6E-38 310.5 25.4 249 801-1077 6-256 (256)
129 cd05599 STKc_NDR_like Catalyti 100.0 1.3E-34 2.7E-39 333.7 20.4 252 801-1073 1-296 (364)
130 cd05628 STKc_NDR1 Catalytic do 100.0 2.9E-34 6.4E-39 329.9 23.3 253 801-1073 1-293 (363)
131 cd05089 PTKc_Tie1 Catalytic do 100.0 2.3E-34 4.9E-39 321.8 21.8 256 801-1079 2-277 (297)
132 cd05116 PTKc_Syk Catalytic dom 100.0 3E-34 6.5E-39 313.8 22.2 245 808-1076 2-254 (257)
133 cd08229 STKc_Nek7 Catalytic do 100.0 3.5E-34 7.6E-39 315.2 22.9 259 801-1078 2-266 (267)
134 cd05107 PTKc_PDGFR_beta Cataly 100.0 6E-34 1.3E-38 328.4 25.5 259 800-1078 36-400 (401)
135 cd05626 STKc_LATS2 Catalytic d 100.0 2.6E-34 5.6E-39 332.5 22.5 252 802-1073 2-305 (381)
136 cd05112 PTKc_Itk Catalytic dom 100.0 8.9E-34 1.9E-38 309.9 25.4 252 801-1075 4-256 (256)
137 cd05589 STKc_PKN Catalytic dom 100.0 2.9E-34 6.3E-39 324.8 22.3 244 803-1072 1-256 (324)
138 cd05115 PTKc_Zap-70 Catalytic 100.0 1.1E-33 2.5E-38 309.0 26.1 246 809-1077 3-255 (257)
139 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.1E-34 1.5E-38 319.0 25.0 259 800-1079 14-298 (304)
140 cd05592 STKc_nPKC_theta_delta 100.0 3.7E-34 8E-39 322.5 22.8 240 807-1071 1-246 (316)
141 KOG0610 Putative serine/threon 100.0 3.3E-34 7.2E-39 303.0 20.8 251 802-1072 78-391 (459)
142 cd05075 PTKc_Axl Catalytic dom 100.0 1.1E-33 2.5E-38 312.0 25.8 254 803-1077 1-271 (272)
143 cd06625 STKc_MEKK3_like Cataly 100.0 1.2E-33 2.5E-38 310.3 25.6 251 801-1073 2-260 (263)
144 PLN00034 mitogen-activated pro 100.0 3.1E-34 6.7E-39 328.6 21.9 247 802-1073 75-328 (353)
145 cd05622 STKc_ROCK1 Catalytic d 100.0 2.8E-34 6.2E-39 330.0 21.6 260 794-1074 36-305 (371)
146 cd05066 PTKc_EphR_A Catalytic 100.0 4.4E-34 9.6E-39 314.3 22.2 255 801-1077 4-266 (267)
147 cd05091 PTKc_Ror2 Catalytic do 100.0 6.3E-34 1.4E-38 316.0 23.7 254 802-1076 6-282 (283)
148 cd05040 PTKc_Ack_like Catalyti 100.0 1.1E-33 2.4E-38 309.3 25.1 249 807-1076 1-257 (257)
149 cd05594 STKc_PKB_alpha Catalyt 100.0 1.7E-34 3.6E-39 327.0 19.0 242 807-1073 1-252 (325)
150 cd08219 STKc_Nek3 Catalytic do 100.0 8.8E-34 1.9E-38 309.7 24.1 250 802-1073 1-252 (255)
151 cd05043 PTK_Ryk Pseudokinase d 100.0 1E-33 2.2E-38 313.8 24.9 259 800-1079 5-278 (280)
152 KOG0667 Dual-specificity tyros 100.0 2.2E-34 4.7E-39 323.9 19.6 195 802-1005 187-390 (586)
153 cd06646 STKc_MAP4K5 Catalytic 100.0 5.8E-34 1.2E-38 313.5 22.6 254 801-1074 9-266 (267)
154 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-33 2.5E-38 311.6 25.0 258 801-1081 6-269 (270)
155 cd05061 PTKc_InsR Catalytic do 100.0 1.2E-33 2.7E-38 314.4 25.4 259 799-1078 4-279 (288)
156 cd05590 STKc_nPKC_eta Catalyti 100.0 3.8E-34 8.2E-39 323.0 21.5 236 807-1067 1-241 (320)
157 cd05097 PTKc_DDR_like Catalyti 100.0 5E-34 1.1E-38 318.8 22.2 263 800-1076 4-295 (295)
158 KOG0199 ACK and related non-re 100.0 6.2E-35 1.3E-39 323.5 14.4 252 803-1076 112-371 (1039)
159 cd05587 STKc_cPKC Catalytic do 100.0 5.2E-34 1.1E-38 322.8 22.4 241 802-1067 1-246 (324)
160 cd05065 PTKc_EphR_B Catalytic 100.0 1.1E-33 2.5E-38 311.5 24.4 255 801-1077 4-268 (269)
161 cd05088 PTKc_Tie2 Catalytic do 100.0 4.1E-34 8.8E-39 320.5 20.8 257 800-1079 6-282 (303)
162 cd05591 STKc_nPKC_epsilon Cata 100.0 4.2E-34 9.1E-39 323.1 21.0 242 807-1073 1-254 (321)
163 cd05608 STKc_GRK1 Catalytic do 100.0 8.4E-34 1.8E-38 314.2 23.0 246 809-1073 1-257 (280)
164 cd05607 STKc_GRK7 Catalytic do 100.0 1.1E-33 2.3E-38 312.9 23.7 246 809-1073 1-250 (277)
165 cd05060 PTKc_Syk_like Catalyti 100.0 8.3E-34 1.8E-38 310.3 22.6 248 807-1078 1-256 (257)
166 cd05629 STKc_NDR_like_fungal C 100.0 3.1E-34 6.7E-39 331.7 20.3 252 801-1073 1-305 (377)
167 cd05109 PTKc_HER2 Catalytic do 100.0 8.2E-34 1.8E-38 314.4 22.6 258 800-1080 6-271 (279)
168 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.2E-33 2.6E-38 313.8 24.1 262 802-1077 5-283 (284)
169 cd07853 STKc_NLK Catalytic dom 100.0 7.7E-34 1.7E-38 327.8 23.2 264 802-1073 1-288 (372)
170 cd05051 PTKc_DDR Catalytic dom 100.0 1.1E-33 2.4E-38 316.3 23.7 263 800-1076 4-296 (296)
171 cd05095 PTKc_DDR2 Catalytic do 100.0 1E-33 2.2E-38 316.5 23.1 263 800-1076 4-296 (296)
172 PRK13184 pknD serine/threonine 100.0 8.6E-34 1.9E-38 342.9 24.1 258 801-1077 2-290 (932)
173 cd05032 PTKc_InsR_like Catalyt 100.0 1.3E-33 2.8E-38 312.6 23.6 255 801-1076 6-277 (277)
174 PTZ00036 glycogen synthase kin 100.0 7.1E-34 1.5E-38 333.3 22.6 259 800-1073 65-351 (440)
175 cd05619 STKc_nPKC_theta Cataly 100.0 9.7E-34 2.1E-38 318.9 22.8 241 807-1072 1-247 (316)
176 cd05597 STKc_DMPK_like Catalyt 100.0 1.1E-33 2.3E-38 320.9 23.3 255 801-1073 1-266 (331)
177 cd06654 STKc_PAK1 Catalytic do 100.0 8.5E-34 1.8E-38 316.8 22.0 250 801-1073 20-270 (296)
178 cd05050 PTKc_Musk Catalytic do 100.0 1.8E-33 4E-38 313.1 24.7 256 800-1076 4-288 (288)
179 cd08223 STKc_Nek4 Catalytic do 100.0 3.3E-33 7.2E-38 305.5 26.1 250 802-1073 1-254 (257)
180 cd05616 STKc_cPKC_beta Catalyt 100.0 1E-33 2.2E-38 320.3 22.7 241 802-1067 1-246 (323)
181 cd05598 STKc_LATS Catalytic do 100.0 3E-34 6.5E-39 331.9 18.8 251 802-1073 2-301 (376)
182 cd05570 STKc_PKC Catalytic dom 100.0 8.5E-34 1.8E-38 320.0 22.0 242 807-1073 1-252 (318)
183 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.2E-33 2.7E-38 322.1 23.5 260 800-1079 6-341 (343)
184 cd06637 STKc_TNIK Catalytic do 100.0 1.2E-33 2.7E-38 311.8 22.7 254 798-1073 3-269 (272)
185 cd05620 STKc_nPKC_delta Cataly 100.0 8.3E-34 1.8E-38 319.6 21.6 240 807-1071 1-246 (316)
186 cd05099 PTKc_FGFR4 Catalytic d 100.0 2E-33 4.4E-38 316.7 24.7 259 800-1079 11-295 (314)
187 KOG0599 Phosphorylase kinase g 100.0 2E-34 4.3E-39 286.8 14.2 253 799-1073 15-283 (411)
188 cd06612 STKc_MST1_2 Catalytic 100.0 1.5E-33 3.3E-38 307.9 22.6 251 800-1073 2-253 (256)
189 cd05630 STKc_GRK6 Catalytic do 100.0 6.8E-34 1.5E-38 315.7 20.0 250 803-1072 2-260 (285)
190 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.2E-33 2.6E-38 320.0 22.3 243 807-1067 1-248 (327)
191 cd05625 STKc_LATS1 Catalytic d 100.0 5.8E-34 1.3E-38 330.1 20.1 251 802-1073 2-305 (382)
192 cd06619 PKc_MKK5 Catalytic dom 100.0 2.7E-33 5.8E-38 310.2 24.2 250 802-1073 2-253 (279)
193 KOG0032 Ca2+/calmodulin-depend 100.0 2.2E-33 4.7E-38 315.3 23.6 252 799-1073 33-293 (382)
194 cd06643 STKc_SLK Catalytic dom 100.0 3.1E-33 6.8E-38 310.3 24.6 250 803-1073 7-262 (282)
195 cd05582 STKc_RSK_N N-terminal 100.0 3.6E-34 7.8E-39 323.3 17.4 238 807-1069 2-245 (318)
196 cd08221 STKc_Nek9 Catalytic do 100.0 4.3E-33 9.3E-38 304.5 25.3 251 802-1074 1-254 (256)
197 cd05058 PTKc_Met_Ron Catalytic 100.0 4.5E-33 9.7E-38 305.4 25.5 252 807-1079 1-261 (262)
198 cd05047 PTKc_Tie Catalytic dom 100.0 1.8E-33 3.9E-38 310.0 22.4 249 807-1078 1-269 (270)
199 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.9E-33 6.3E-38 306.6 23.9 240 807-1075 1-262 (262)
200 KOG4279 Serine/threonine prote 100.0 1.6E-34 3.5E-39 319.0 13.8 245 808-1072 582-831 (1226)
201 PHA03211 serine/threonine kina 100.0 2.7E-33 5.8E-38 326.5 25.0 262 800-1073 168-455 (461)
202 cd05041 PTKc_Fes_like Catalyti 100.0 2.2E-33 4.8E-38 305.8 22.6 248 807-1076 1-251 (251)
203 KOG0574 STE20-like serine/thre 100.0 2.1E-35 4.5E-40 297.0 6.0 248 803-1073 35-283 (502)
204 cd05632 STKc_GRK5 Catalytic do 100.0 3.1E-33 6.7E-38 310.5 23.9 251 803-1073 2-261 (285)
205 cd06645 STKc_MAP4K3 Catalytic 100.0 2E-33 4.4E-38 309.1 22.2 253 801-1073 9-265 (267)
206 cd06656 STKc_PAK3 Catalytic do 100.0 2.8E-33 6E-38 312.8 23.4 250 800-1072 18-268 (297)
207 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 8.4E-34 1.8E-38 315.2 19.1 265 801-1078 4-284 (284)
208 cd06624 STKc_ASK Catalytic dom 100.0 2.6E-33 5.6E-38 308.4 22.8 255 798-1073 5-265 (268)
209 cd00192 PTKc Catalytic domain 100.0 5.4E-33 1.2E-37 304.5 25.2 248 807-1075 1-262 (262)
210 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.5E-33 9.7E-38 316.7 25.4 257 801-1078 12-294 (334)
211 cd08218 STKc_Nek1 Catalytic do 100.0 3.9E-33 8.5E-38 304.8 24.0 250 802-1073 1-253 (256)
212 cd06615 PKc_MEK Catalytic doma 100.0 3.1E-33 6.7E-38 314.2 23.7 261 801-1073 1-287 (308)
213 cd06644 STKc_STK10_LOK Catalyt 100.0 5.5E-33 1.2E-37 309.9 25.4 253 800-1073 11-269 (292)
214 KOG0577 Serine/threonine prote 100.0 1.5E-34 3.3E-39 314.6 12.2 245 803-1074 28-279 (948)
215 cd05575 STKc_SGK Catalytic dom 100.0 1E-33 2.2E-38 320.2 19.5 237 807-1068 1-242 (323)
216 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 6.7E-33 1.5E-37 305.3 25.4 252 807-1075 1-268 (269)
217 cd06631 STKc_YSK4 Catalytic do 100.0 5.7E-33 1.2E-37 305.2 24.8 250 802-1072 1-261 (265)
218 cd07876 STKc_JNK2 Catalytic do 100.0 2.5E-33 5.3E-38 322.1 22.8 258 799-1073 19-315 (359)
219 cd05615 STKc_cPKC_alpha Cataly 100.0 2.6E-33 5.6E-38 316.7 22.4 241 802-1067 1-246 (323)
220 cd05083 PTKc_Chk Catalytic dom 100.0 1.8E-33 3.9E-38 307.1 20.4 247 801-1076 6-253 (254)
221 cd06613 STKc_MAP4K3_like Catal 100.0 7.1E-33 1.5E-37 303.8 25.0 254 800-1072 2-259 (262)
222 cd07863 STKc_CDK4 Catalytic do 100.0 1.9E-33 4.2E-38 313.0 20.8 261 802-1073 1-285 (288)
223 cd05046 PTK_CCK4 Pseudokinase 100.0 5.8E-33 1.3E-37 306.9 24.4 255 801-1075 5-274 (275)
224 cd05602 STKc_SGK1 Catalytic do 100.0 1.4E-33 3.1E-38 319.4 19.8 240 807-1071 1-245 (325)
225 cd06655 STKc_PAK2 Catalytic do 100.0 6.6E-33 1.4E-37 309.5 24.9 250 801-1073 19-269 (296)
226 cd08528 STKc_Nek10 Catalytic d 100.0 9.8E-33 2.1E-37 304.0 25.9 254 802-1076 1-269 (269)
227 smart00219 TyrKc Tyrosine kina 100.0 8.2E-33 1.8E-37 302.5 25.0 251 803-1074 1-258 (258)
228 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.1E-33 8.9E-38 313.5 23.2 261 801-1072 6-285 (309)
229 cd07874 STKc_JNK3 Catalytic do 100.0 2.8E-33 6E-38 321.3 22.2 258 799-1073 15-311 (355)
230 cd05604 STKc_SGK3 Catalytic do 100.0 1.1E-33 2.3E-38 320.4 18.5 238 807-1069 1-243 (325)
231 PF00069 Pkinase: Protein kina 100.0 1.6E-33 3.4E-38 308.6 19.0 253 803-1073 1-257 (260)
232 cd08227 PK_STRAD_alpha Pseudok 100.0 5.3E-33 1.2E-37 315.1 24.0 257 805-1073 2-307 (327)
233 cd05623 STKc_MRCK_alpha Cataly 100.0 2.8E-33 6.1E-38 317.8 21.8 255 801-1073 1-266 (332)
234 cd05624 STKc_MRCK_beta Catalyt 100.0 2.3E-33 5E-38 318.2 20.9 255 801-1073 1-266 (331)
235 cd05627 STKc_NDR2 Catalytic do 100.0 1.6E-33 3.5E-38 323.6 19.5 251 802-1073 2-293 (360)
236 cd05057 PTKc_EGFR_like Catalyt 100.0 9.6E-33 2.1E-37 305.8 25.1 255 801-1078 7-269 (279)
237 PTZ00266 NIMA-related protein 100.0 4.4E-33 9.6E-38 337.8 24.2 261 798-1078 10-302 (1021)
238 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5E-33 1.1E-37 306.8 22.6 239 808-1075 2-274 (274)
239 PHA03207 serine/threonine kina 100.0 4E-33 8.8E-38 323.4 22.8 260 800-1073 91-375 (392)
240 cd05603 STKc_SGK2 Catalytic do 100.0 2.1E-33 4.5E-38 317.5 19.8 237 807-1068 1-242 (321)
241 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.2E-33 6.9E-38 309.3 20.8 247 802-1073 5-253 (277)
242 cd06611 STKc_SLK_like Catalyti 100.0 5.5E-33 1.2E-37 307.9 22.7 253 800-1073 4-262 (280)
243 cd06632 STKc_MEKK1_plant Catal 100.0 1E-32 2.2E-37 301.9 24.4 248 802-1073 1-255 (258)
244 cd05110 PTKc_HER4 Catalytic do 100.0 3.4E-33 7.3E-38 313.2 21.0 257 800-1079 6-270 (303)
245 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.1E-32 2.3E-37 303.4 24.5 248 802-1072 1-263 (267)
246 KOG0444 Cytoskeletal regulator 100.0 3.6E-36 7.8E-41 328.4 -3.1 385 109-671 6-394 (1255)
247 cd06609 STKc_MST3_like Catalyt 100.0 4.6E-33 9.9E-38 307.6 21.5 249 801-1073 1-251 (274)
248 cd08220 STKc_Nek8 Catalytic do 100.0 1E-32 2.2E-37 301.5 23.8 249 802-1073 1-253 (256)
249 cd05044 PTKc_c-ros Catalytic d 100.0 3.2E-33 6.9E-38 307.9 20.0 249 807-1076 1-269 (269)
250 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 6.5E-33 1.4E-37 308.0 22.6 259 801-1075 5-268 (284)
251 cd06638 STKc_myosinIIIA Cataly 100.0 4.6E-33 1E-37 309.6 21.3 262 792-1074 9-284 (286)
252 cd06640 STKc_MST4 Catalytic do 100.0 1E-32 2.3E-37 305.1 23.9 248 801-1073 4-253 (277)
253 cd07868 STKc_CDK8 Catalytic do 100.0 8.5E-33 1.8E-37 312.3 23.5 195 806-1006 6-219 (317)
254 cd07861 STKc_CDK1_euk Catalyti 100.0 6.2E-33 1.3E-37 308.4 21.8 262 802-1073 1-282 (285)
255 cd07875 STKc_JNK1 Catalytic do 100.0 8E-33 1.7E-37 318.5 23.3 258 799-1073 22-318 (364)
256 cd05042 PTKc_Aatyk Catalytic d 100.0 2.1E-32 4.6E-37 301.4 25.3 251 808-1075 2-268 (269)
257 cd06651 STKc_MEKK3 Catalytic d 100.0 1.8E-32 3.8E-37 301.4 24.5 249 801-1072 2-260 (266)
258 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.1E-33 6.7E-38 305.9 18.4 240 807-1075 1-258 (258)
259 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.4E-32 3.1E-37 300.9 23.3 238 807-1075 1-259 (259)
260 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6.6E-33 1.4E-37 307.7 20.9 260 791-1072 6-278 (282)
261 PHA03209 serine/threonine kina 100.0 8.1E-33 1.8E-37 316.9 22.0 193 799-1004 64-257 (357)
262 PTZ00284 protein kinase; Provi 100.0 9.9E-33 2.1E-37 327.7 23.4 264 795-1073 123-438 (467)
263 cd06605 PKc_MAPKK Catalytic do 100.0 1E-32 2.3E-37 303.1 21.9 253 802-1073 2-257 (265)
264 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.9E-32 6.2E-37 300.0 25.2 251 808-1075 2-267 (268)
265 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.5E-33 2.1E-37 307.1 21.3 260 801-1073 1-283 (286)
266 KOG4717 Serine/threonine prote 100.0 4.1E-33 8.9E-38 298.8 17.4 248 800-1072 17-269 (864)
267 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.9E-32 6.3E-37 301.0 24.9 255 803-1078 1-273 (273)
268 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.1E-32 2.3E-37 315.0 22.2 256 798-1073 12-298 (343)
269 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.9E-32 4.1E-37 307.0 23.5 261 801-1072 6-285 (301)
270 KOG1025 Epidermal growth facto 100.0 1.2E-33 2.5E-38 318.7 13.6 252 804-1078 699-958 (1177)
271 cd05574 STKc_phototropin_like 100.0 3E-32 6.4E-37 307.7 25.3 252 801-1072 1-288 (316)
272 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.5E-32 9.7E-37 301.7 26.3 262 801-1073 1-283 (286)
273 KOG0618 Serine/threonine phosp 100.0 7.1E-36 1.5E-40 342.8 -4.5 449 105-675 40-488 (1081)
274 cd07832 STKc_CCRK Catalytic do 100.0 2.5E-32 5.4E-37 303.7 24.1 262 802-1073 1-282 (286)
275 cd07839 STKc_CDK5 Catalytic do 100.0 9.7E-33 2.1E-37 306.7 20.8 262 802-1073 1-281 (284)
276 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.8E-32 6E-37 300.0 24.0 256 801-1073 1-264 (267)
277 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2E-32 4.3E-37 304.5 22.9 252 802-1073 2-262 (286)
278 cd06639 STKc_myosinIIIB Cataly 100.0 2E-32 4.4E-37 305.2 23.1 262 791-1073 12-287 (291)
279 cd07867 STKc_CDC2L6 Catalytic 100.0 2.7E-32 5.9E-37 308.2 24.4 194 807-1006 7-219 (317)
280 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.5E-32 7.6E-37 302.6 24.8 260 801-1073 1-266 (287)
281 KOG0596 Dual specificity; seri 100.0 2.5E-33 5.5E-38 304.9 15.0 251 801-1073 361-627 (677)
282 cd06626 STKc_MEKK4 Catalytic d 100.0 3.8E-32 8.3E-37 298.4 24.4 251 802-1072 1-260 (264)
283 cd06659 STKc_PAK6 Catalytic do 100.0 2.3E-32 5E-37 305.3 22.4 248 803-1073 23-271 (297)
284 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.7E-32 7.9E-37 300.0 23.7 254 802-1073 2-269 (272)
285 cd08225 STKc_Nek5 Catalytic do 100.0 2.4E-32 5.3E-37 298.7 22.0 250 802-1073 1-254 (257)
286 cd06630 STKc_MEKK1 Catalytic d 100.0 3.9E-32 8.5E-37 299.0 23.7 252 802-1072 1-263 (268)
287 cd06652 STKc_MEKK2 Catalytic d 100.0 6E-32 1.3E-36 297.0 25.1 250 801-1073 2-261 (265)
288 cd05609 STKc_MAST Catalytic do 100.0 4.5E-32 9.8E-37 304.5 24.5 254 801-1075 1-272 (305)
289 cd06623 PKc_MAPKK_plant_like C 100.0 6.6E-32 1.4E-36 296.5 25.1 252 801-1073 1-256 (264)
290 cd06647 STKc_PAK_I Catalytic d 100.0 2.7E-32 5.8E-37 304.2 22.2 250 801-1073 19-269 (293)
291 cd06658 STKc_PAK5 Catalytic do 100.0 1.8E-32 3.9E-37 305.3 20.7 248 803-1073 24-272 (292)
292 cd07833 STKc_CDKL Catalytic do 100.0 2.8E-32 6.1E-37 303.6 22.3 263 801-1073 1-285 (288)
293 cd08217 STKc_Nek2 Catalytic do 100.0 2.4E-32 5.2E-37 300.0 21.2 250 802-1073 1-262 (265)
294 KOG0690 Serine/threonine prote 100.0 2E-33 4.4E-38 285.8 11.5 248 800-1072 167-423 (516)
295 cd07860 STKc_CDK2_3 Catalytic 100.0 3.8E-32 8.1E-37 302.0 22.4 260 802-1073 1-281 (284)
296 cd06648 STKc_PAK_II Catalytic 100.0 7.2E-32 1.5E-36 299.6 24.5 247 803-1072 21-268 (285)
297 cd05586 STKc_Sck1_like Catalyt 100.0 7.8E-33 1.7E-37 314.2 16.9 240 809-1072 1-252 (330)
298 cd06608 STKc_myosinIII_like Ca 100.0 3.5E-32 7.6E-37 300.5 21.5 254 799-1073 4-272 (275)
299 cd06917 STKc_NAK1_like Catalyt 100.0 4.6E-32 1E-36 300.1 22.4 248 802-1073 2-255 (277)
300 cd05580 STKc_PKA Catalytic dom 100.0 6E-32 1.3E-36 301.2 23.2 244 801-1072 1-253 (290)
301 cd07841 STKc_CDK7 Catalytic do 100.0 7.3E-32 1.6E-36 301.9 23.9 261 802-1073 1-282 (298)
302 cd06614 STKc_PAK Catalytic dom 100.0 8.8E-32 1.9E-36 299.3 24.1 253 799-1073 17-270 (286)
303 cd05122 PKc_STE Catalytic doma 100.0 1.9E-31 4E-36 290.5 26.0 250 802-1073 1-251 (253)
304 cd06641 STKc_MST3 Catalytic do 100.0 6.4E-32 1.4E-36 298.8 22.6 247 802-1073 5-253 (277)
305 KOG0584 Serine/threonine prote 100.0 7.3E-33 1.6E-37 308.0 14.5 245 804-1072 43-295 (632)
306 cd07844 STKc_PCTAIRE_like Cata 100.0 5.9E-32 1.3E-36 301.5 22.0 262 801-1072 5-287 (291)
307 cd07843 STKc_CDC2L1 Catalytic 100.0 8.8E-32 1.9E-36 300.4 23.5 263 801-1073 5-290 (293)
308 cd06607 STKc_TAO Catalytic dom 100.0 1.3E-31 2.8E-36 301.0 24.9 247 800-1073 14-267 (307)
309 KOG0579 Ste20-like serine/thre 100.0 3.8E-33 8.3E-38 305.0 11.7 251 802-1073 33-289 (1187)
310 cd07835 STKc_CDK1_like Catalyt 100.0 1.2E-31 2.6E-36 297.8 24.0 258 803-1073 1-280 (283)
311 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.6E-31 3.4E-36 298.1 25.0 262 799-1072 3-287 (291)
312 KOG0444 Cytoskeletal regulator 100.0 4.7E-35 1E-39 319.7 -3.4 371 134-682 7-381 (1255)
313 cd06617 PKc_MKK3_6 Catalytic d 100.0 9.9E-32 2.2E-36 298.4 22.6 251 801-1072 1-260 (283)
314 PLN00009 cyclin-dependent kina 100.0 1.9E-31 4.2E-36 297.8 24.2 261 801-1073 2-284 (294)
315 cd07850 STKc_JNK Catalytic dom 100.0 2E-31 4.4E-36 305.4 24.8 258 799-1073 14-311 (353)
316 cd05578 STKc_Yank1 Catalytic d 100.0 3.5E-32 7.6E-37 297.6 17.4 247 802-1071 1-253 (258)
317 PHA02882 putative serine/threo 100.0 1.6E-31 3.4E-36 298.0 23.0 259 800-1075 11-294 (294)
318 cd06606 STKc_MAPKKK Catalytic 100.0 1.8E-31 3.8E-36 291.9 22.9 251 802-1073 1-257 (260)
319 cd06616 PKc_MKK4 Catalytic dom 100.0 6.8E-32 1.5E-36 300.5 19.7 254 802-1073 5-267 (288)
320 cd07840 STKc_CDK9_like Catalyt 100.0 1.5E-31 3.3E-36 297.5 22.4 261 803-1073 1-284 (287)
321 cd08215 STKc_Nek Catalytic dom 100.0 2.6E-31 5.7E-36 290.4 23.7 250 802-1073 1-255 (258)
322 cd07842 STKc_CDK8_like Catalyt 100.0 2E-31 4.3E-36 301.1 23.4 268 802-1073 1-313 (316)
323 cd06635 STKc_TAO1 Catalytic do 100.0 5E-31 1.1E-35 297.6 26.5 248 803-1077 27-281 (317)
324 cd08530 STKc_CNK2-like Catalyt 100.0 9.9E-32 2.1E-36 293.6 19.8 248 802-1073 1-253 (256)
325 PHA03390 pk1 serine/threonine- 100.0 4.5E-31 9.7E-36 290.1 24.5 250 793-1072 6-261 (267)
326 KOG4645 MAPKKK (MAP kinase kin 100.0 2.8E-33 6E-38 331.4 6.8 252 799-1073 1233-1494(1509)
327 cd05577 STKc_GRK Catalytic dom 100.0 1.7E-31 3.8E-36 295.4 20.5 244 809-1072 1-253 (277)
328 PHA03210 serine/threonine kina 100.0 8.7E-32 1.9E-36 320.4 19.4 266 799-1073 146-454 (501)
329 KOG0618 Serine/threonine phosp 100.0 1.2E-34 2.7E-39 332.6 -4.9 471 102-696 13-489 (1081)
330 KOG4250 TANK binding protein k 100.0 5E-32 1.1E-36 304.8 16.1 268 802-1078 14-311 (732)
331 cd08226 PK_STRAD_beta Pseudoki 100.0 3.9E-31 8.5E-36 299.9 23.7 260 807-1073 4-308 (328)
332 cd07837 STKc_CdkB_plant Cataly 100.0 4.4E-31 9.6E-36 295.1 23.8 261 801-1073 1-291 (295)
333 cd06627 STKc_Cdc7_like Catalyt 100.0 5.9E-31 1.3E-35 287.0 24.0 247 802-1072 1-250 (254)
334 KOG0986 G protein-coupled rece 100.0 3E-32 6.6E-37 289.6 13.1 243 801-1066 185-434 (591)
335 cd07836 STKc_Pho85 Catalytic d 100.0 2.7E-31 5.9E-36 295.1 21.6 261 802-1072 1-280 (284)
336 cd08216 PK_STRAD Pseudokinase 100.0 5E-31 1.1E-35 297.5 24.0 256 805-1073 6-295 (314)
337 cd05118 STKc_CMGC Catalytic do 100.0 4.9E-31 1.1E-35 292.8 23.6 260 803-1073 1-280 (283)
338 cd07845 STKc_CDK10 Catalytic d 100.0 4.5E-31 9.8E-36 297.0 23.5 261 799-1073 5-290 (309)
339 cd05572 STKc_cGK_PKG Catalytic 100.0 5E-31 1.1E-35 289.2 23.2 242 809-1072 1-251 (262)
340 KOG0586 Serine/threonine prote 100.0 8.1E-32 1.8E-36 299.6 16.9 248 800-1073 55-306 (596)
341 cd05633 STKc_GRK3 Catalytic do 100.0 2.3E-31 5.1E-36 294.4 20.6 242 808-1073 1-255 (279)
342 cd05583 STKc_MSK_N N-terminal 100.0 4.3E-31 9.4E-36 294.1 22.5 255 802-1076 1-266 (288)
343 cd07838 STKc_CDK4_6_like Catal 100.0 8.3E-31 1.8E-35 291.6 24.8 257 803-1073 1-284 (287)
344 cd05579 STKc_MAST_like Catalyt 100.0 3.4E-31 7.3E-36 290.9 21.1 245 809-1075 1-256 (265)
345 cd07831 STKc_MOK Catalytic dom 100.0 6.7E-31 1.5E-35 291.6 23.7 258 803-1073 1-279 (282)
346 cd06657 STKc_PAK4 Catalytic do 100.0 5.6E-31 1.2E-35 293.2 23.0 245 806-1073 25-270 (292)
347 cd07864 STKc_CDK12 Catalytic d 100.0 6E-31 1.3E-35 295.1 23.4 265 798-1073 4-299 (302)
348 cd07849 STKc_ERK1_2_like Catal 100.0 4.4E-31 9.5E-36 300.6 22.5 267 800-1078 4-299 (336)
349 cd05613 STKc_MSK1_N N-terminal 100.0 7.3E-31 1.6E-35 292.5 23.3 251 802-1072 1-267 (290)
350 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.2E-30 2.5E-35 286.6 24.5 250 801-1073 2-261 (264)
351 KOG1035 eIF-2alpha kinase GCN2 100.0 1.2E-31 2.7E-36 316.2 17.5 254 798-1072 476-870 (1351)
352 cd06618 PKc_MKK7 Catalytic dom 100.0 9.2E-31 2E-35 292.5 23.7 254 800-1074 14-274 (296)
353 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4E-31 8.8E-36 300.9 19.8 267 800-1079 4-299 (337)
354 cd07865 STKc_CDK9 Catalytic do 100.0 1.3E-30 2.8E-35 293.6 23.6 263 800-1073 11-307 (310)
355 cd05611 STKc_Rim15_like Cataly 100.0 1.2E-30 2.7E-35 285.7 22.8 243 807-1074 2-249 (260)
356 cd07855 STKc_ERK5 Catalytic do 100.0 5.3E-31 1.1E-35 299.7 20.5 262 800-1073 4-294 (334)
357 KOG0607 MAP kinase-interacting 100.0 2.5E-31 5.3E-36 270.5 15.5 264 793-1072 75-360 (463)
358 cd05581 STKc_PDK1 Catalytic do 100.0 7.6E-31 1.7E-35 290.7 21.1 248 801-1072 1-276 (280)
359 cd07834 STKc_MAPK Catalytic do 100.0 9.4E-31 2E-35 297.4 21.9 265 802-1080 1-298 (330)
360 cd07852 STKc_MAPK15 Catalytic 100.0 1E-30 2.3E-35 297.7 22.1 263 799-1073 5-295 (337)
361 cd06634 STKc_TAO2 Catalytic do 100.0 1.7E-30 3.7E-35 291.9 23.3 248 801-1075 15-269 (308)
362 cd07830 STKc_MAK_like Catalyti 100.0 1.2E-30 2.6E-35 289.7 21.5 265 803-1073 1-280 (283)
363 cd07879 STKc_p38delta_MAPK13 C 100.0 1.3E-30 2.8E-35 297.3 22.1 260 800-1079 14-305 (342)
364 cd06633 STKc_TAO3 Catalytic do 100.0 3.4E-30 7.4E-35 290.1 25.3 244 803-1073 23-273 (313)
365 cd08222 STKc_Nek11 Catalytic d 100.0 2E-30 4.3E-35 284.1 22.3 249 802-1073 1-257 (260)
366 KOG0612 Rho-associated, coiled 100.0 1E-31 2.2E-36 314.3 12.6 258 795-1073 69-338 (1317)
367 cd05606 STKc_beta_ARK Catalyti 100.0 1.7E-30 3.8E-35 287.3 21.8 242 808-1073 1-255 (278)
368 KOG0604 MAP kinase-activated p 100.0 1.2E-31 2.7E-36 270.9 11.4 254 799-1073 59-322 (400)
369 KOG0666 Cyclin C-dependent kin 100.0 1.8E-31 4E-36 270.7 12.4 271 799-1073 22-337 (438)
370 cd07866 STKc_BUR1 Catalytic do 100.0 1.7E-30 3.6E-35 292.9 21.6 260 800-1072 7-307 (311)
371 KOG0983 Mitogen-activated prot 100.0 2.8E-31 6E-36 264.8 13.2 250 803-1073 94-349 (391)
372 KOG0200 Fibroblast/platelet-de 100.0 1.8E-30 3.8E-35 313.4 22.8 257 801-1077 296-579 (609)
373 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.4E-30 7.3E-35 294.1 23.4 263 792-1073 8-300 (345)
374 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.3E-30 7.2E-35 291.8 22.7 266 796-1073 5-288 (328)
375 cd07880 STKc_p38gamma_MAPK12 C 100.0 5.5E-30 1.2E-34 292.1 23.9 255 799-1072 13-297 (343)
376 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.2E-30 6.8E-35 294.1 21.9 258 800-1072 4-299 (342)
377 PTZ00024 cyclin-dependent prot 100.0 4.1E-30 8.9E-35 292.7 22.8 263 800-1073 7-313 (335)
378 cd07829 STKc_CDK_like Catalyti 100.0 3.8E-30 8.2E-35 285.5 21.8 260 803-1073 1-279 (282)
379 KOG1151 Tousled-like protein k 100.0 1.6E-31 3.4E-36 281.8 10.0 257 800-1072 462-740 (775)
380 cd07851 STKc_p38 Catalytic dom 100.0 2.8E-30 6.1E-35 294.6 19.9 256 799-1073 13-298 (343)
381 cd05610 STKc_MASTL Catalytic d 100.0 1.5E-29 3.3E-34 310.4 25.7 145 801-950 4-152 (669)
382 cd05123 STKc_AGC Catalytic dom 100.0 1.2E-29 2.7E-34 276.0 21.9 236 809-1069 1-240 (250)
383 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-29 3.3E-34 287.5 23.0 260 802-1072 1-291 (332)
384 KOG0696 Serine/threonine prote 100.0 1.7E-30 3.7E-35 272.0 12.8 240 801-1065 349-593 (683)
385 KOG4236 Serine/threonine prote 100.0 9.2E-31 2E-35 281.5 11.0 243 806-1071 569-817 (888)
386 KOG0671 LAMMER dual specificit 100.0 1.9E-30 4.2E-35 272.1 11.2 259 800-1073 88-406 (415)
387 KOG1006 Mitogen-activated prot 100.0 3.6E-31 7.8E-36 263.3 3.6 250 806-1072 69-326 (361)
388 cd05576 STKc_RPK118_like Catal 100.0 2.6E-29 5.6E-34 270.9 18.4 220 812-1068 4-224 (237)
389 KOG0587 Traf2- and Nck-interac 100.0 2.4E-29 5.3E-34 288.2 18.8 262 791-1073 9-282 (953)
390 KOG0603 Ribosomal protein S6 k 100.0 1.1E-29 2.3E-34 284.3 14.4 241 799-1073 320-563 (612)
391 KOG0662 Cyclin-dependent kinas 100.0 1.9E-29 4.2E-34 236.2 11.4 260 802-1073 3-283 (292)
392 PLN03225 Serine/threonine-prot 100.0 8.5E-29 1.8E-33 295.8 20.1 262 799-1073 130-450 (566)
393 KOG1024 Receptor-like protein 100.0 1.9E-29 4.2E-34 263.2 12.4 264 793-1077 276-555 (563)
394 KOG0695 Serine/threonine prote 100.0 4.3E-29 9.3E-34 254.9 14.6 249 800-1065 249-502 (593)
395 smart00220 S_TKc Serine/Threon 100.0 4.8E-28 1E-32 261.7 23.1 238 813-1072 1-240 (244)
396 KOG0669 Cyclin T-dependent kin 100.0 1.8E-30 3.9E-35 255.9 3.1 262 801-1073 17-315 (376)
397 PLN03224 probable serine/threo 100.0 2.5E-28 5.3E-33 283.7 20.8 262 799-1073 143-500 (507)
398 KOG0614 cGMP-dependent protein 100.0 1.9E-29 4E-34 271.2 7.1 247 803-1073 422-677 (732)
399 KOG1027 Serine/threonine prote 100.0 1.1E-28 2.3E-33 281.7 10.0 244 803-1072 511-766 (903)
400 KOG0984 Mitogen-activated prot 99.9 1.2E-27 2.7E-32 229.7 13.1 198 805-1007 50-256 (282)
401 KOG0664 Nemo-like MAPK-related 99.9 2.5E-29 5.4E-34 250.2 1.2 264 804-1074 56-344 (449)
402 KOG0608 Warts/lats-like serine 99.9 2.2E-27 4.7E-32 260.8 16.2 203 802-1009 630-877 (1034)
403 KOG1290 Serine/threonine prote 99.9 1E-26 2.2E-31 250.3 19.3 133 800-936 77-222 (590)
404 KOG0668 Casein kinase II, alph 99.9 2.5E-27 5.4E-32 230.7 12.3 257 801-1073 38-322 (338)
405 cd00180 PKc Catalytic domain o 99.9 2.3E-25 4.9E-30 234.9 22.7 210 809-1073 1-214 (215)
406 KOG0665 Jun-N-terminal kinase 99.9 1E-26 2.2E-31 238.5 11.4 255 801-1073 17-310 (369)
407 KOG1152 Signal transduction se 99.9 2.3E-26 5E-31 251.4 9.0 197 800-1004 560-770 (772)
408 smart00221 STYKc Protein kinas 99.9 9.8E-25 2.1E-29 233.0 20.2 198 803-1004 1-201 (225)
409 KOG4237 Extracellular matrix p 99.9 9.9E-28 2.1E-32 251.6 -4.3 410 113-601 70-498 (498)
410 KOG0576 Mitogen-activated prot 99.9 2.9E-26 6.3E-31 254.9 6.6 253 800-1072 14-270 (829)
411 KOG0670 U4/U6-associated splic 99.9 3.6E-25 7.8E-30 239.0 9.4 199 799-1005 430-637 (752)
412 KOG1345 Serine/threonine kinas 99.9 1.1E-24 2.3E-29 217.9 11.1 253 801-1075 24-286 (378)
413 KOG1167 Serine/threonine prote 99.9 2.2E-24 4.8E-29 230.2 11.1 269 795-1073 30-381 (418)
414 PLN03210 Resistant to P. syrin 99.9 9.9E-23 2.1E-27 264.4 26.2 199 176-408 552-756 (1153)
415 PLN03210 Resistant to P. syrin 99.9 2.3E-22 5.1E-27 260.9 28.3 270 104-409 552-835 (1153)
416 KOG0195 Integrin-linked kinase 99.9 4.2E-24 9.2E-29 213.0 7.7 249 805-1078 194-447 (448)
417 KOG4237 Extracellular matrix p 99.9 3.7E-25 8E-30 232.4 -2.0 391 95-577 76-498 (498)
418 PLN00181 protein SPA1-RELATED; 99.9 7.5E-24 1.6E-28 267.1 8.5 196 853-1073 28-265 (793)
419 smart00750 KIND kinase non-cat 99.9 2E-22 4.3E-27 206.5 16.3 168 882-1078 1-170 (176)
420 KOG1164 Casein kinase (serine/ 99.9 2.1E-21 4.6E-26 218.3 22.7 259 802-1078 19-298 (322)
421 PRK15387 E3 ubiquitin-protein 99.9 6.3E-22 1.4E-26 237.5 16.8 74 135-220 202-275 (788)
422 KOG1165 Casein kinase (serine/ 99.9 2.5E-21 5.4E-26 199.3 17.2 259 800-1076 27-298 (449)
423 PRK15387 E3 ubiquitin-protein 99.9 1.1E-21 2.4E-26 235.5 16.8 119 521-657 345-463 (788)
424 PRK09188 serine/threonine prot 99.9 1E-21 2.2E-26 219.0 15.3 166 796-977 13-194 (365)
425 KOG1163 Casein kinase (serine/ 99.9 1.9E-21 4.1E-26 191.5 14.6 259 800-1076 14-283 (341)
426 COG0515 SPS1 Serine/threonine 99.8 1.9E-18 4E-23 196.4 25.8 260 803-1073 2-275 (384)
427 KOG0590 Checkpoint kinase and 99.8 3E-20 6.5E-25 221.2 7.7 252 805-1072 322-584 (601)
428 PRK15370 E3 ubiquitin-protein 99.8 1.4E-19 3.1E-24 219.2 13.5 117 136-268 180-296 (754)
429 PRK10359 lipopolysaccharide co 99.8 1.7E-19 3.7E-24 186.5 9.5 171 799-997 29-216 (232)
430 PRK15370 E3 ubiquitin-protein 99.8 4E-19 8.6E-24 215.3 13.4 246 110-412 178-428 (754)
431 cd05147 RIO1_euk RIO kinase fa 99.8 4.5E-19 9.8E-24 182.2 11.6 140 806-953 2-168 (190)
432 cd05145 RIO1_like RIO kinase f 99.8 5.2E-18 1.1E-22 175.3 15.2 139 806-953 2-168 (190)
433 PRK12274 serine/threonine prot 99.8 9.5E-18 2.1E-22 169.3 16.1 185 804-1005 5-209 (218)
434 KOG1023 Natriuretic peptide re 99.8 3.3E-18 7.3E-23 193.5 12.7 217 851-1079 1-226 (484)
435 PF14531 Kinase-like: Kinase-l 99.7 2E-17 4.3E-22 176.3 14.7 231 803-1064 14-288 (288)
436 KOG1240 Protein kinase contain 99.7 1.5E-18 3.3E-23 203.8 6.6 253 802-1080 24-298 (1431)
437 KOG0617 Ras suppressor protein 99.7 6.3E-20 1.4E-24 171.5 -4.5 166 106-278 29-195 (264)
438 KOG4158 BRPK/PTEN-induced prot 99.7 1.2E-17 2.6E-22 176.0 11.3 196 855-1074 274-511 (598)
439 cd00116 LRR_RI Leucine-rich re 99.7 3.1E-19 6.8E-24 201.8 -2.4 267 103-411 16-319 (319)
440 KOG1166 Mitotic checkpoint ser 99.7 6.9E-17 1.5E-21 195.1 17.0 246 799-1077 696-953 (974)
441 KOG0603 Ribosomal protein S6 k 99.7 6.3E-18 1.4E-22 190.3 3.8 224 809-1067 2-232 (612)
442 PRK10345 hypothetical protein; 99.7 2.1E-16 4.6E-21 163.6 14.4 135 805-949 6-156 (210)
443 cd00116 LRR_RI Leucine-rich re 99.7 2.5E-18 5.4E-23 194.4 -1.5 244 101-388 42-319 (319)
444 smart00090 RIO RIO-like kinase 99.7 3.5E-16 7.5E-21 166.4 13.0 142 802-953 29-199 (237)
445 KOG0617 Ras suppressor protein 99.7 2.6E-18 5.7E-23 160.7 -3.0 173 518-696 33-212 (264)
446 cd05144 RIO2_C RIO kinase fami 99.6 1.5E-15 3.3E-20 158.3 13.3 144 795-953 9-176 (198)
447 PRK14879 serine/threonine prot 99.6 1.7E-15 3.6E-20 160.1 13.5 134 807-951 2-143 (211)
448 TIGR03724 arch_bud32 Kae1-asso 99.6 2.5E-15 5.4E-20 157.1 12.9 131 808-952 1-139 (199)
449 KOG1033 eIF-2alpha kinase PEK/ 99.6 3.5E-16 7.5E-21 173.1 5.5 174 871-1071 330-510 (516)
450 PRK09605 bifunctional UGMP fam 99.6 5.1E-15 1.1E-19 178.1 13.3 139 799-952 331-477 (535)
451 KOG0606 Microtubule-associated 99.6 2.8E-15 6.1E-20 176.9 8.9 208 800-1065 82-304 (1205)
452 PLN03150 hypothetical protein; 99.6 1.5E-14 3.2E-19 175.6 13.0 143 2-193 375-526 (623)
453 cd05119 RIO RIO kinase family, 99.5 6.9E-14 1.5E-18 144.7 11.8 136 806-953 2-165 (187)
454 cd05120 APH_ChoK_like Aminogly 99.5 1.4E-13 3.1E-18 136.8 13.0 135 805-951 2-138 (155)
455 PRK01723 3-deoxy-D-manno-octul 99.5 4.2E-13 9.1E-18 143.2 13.8 134 807-951 37-191 (239)
456 KOG0590 Checkpoint kinase and 99.4 1.1E-14 2.3E-19 173.9 -0.1 253 801-1071 20-284 (601)
457 KOG0532 Leucine-rich repeat (L 99.4 8.5E-15 1.8E-19 161.6 -4.4 179 107-295 72-250 (722)
458 PLN03150 hypothetical protein; 99.4 7.4E-13 1.6E-17 160.8 9.5 105 569-673 420-525 (623)
459 KOG0532 Leucine-rich repeat (L 99.4 3.4E-14 7.4E-19 157.0 -4.0 205 105-393 45-251 (722)
460 TIGR01982 UbiB 2-polyprenylphe 99.3 4.7E-12 1E-16 147.0 12.4 142 806-954 122-309 (437)
461 KOG1266 Protein kinase [Signal 99.3 3.3E-12 7.2E-17 132.5 6.3 205 847-1074 117-332 (458)
462 KOG1243 Protein kinase [Genera 99.3 1.5E-10 3.3E-15 132.4 19.3 168 821-1000 33-200 (690)
463 COG4886 Leucine-rich repeat (L 99.3 4.1E-12 8.8E-17 147.9 6.6 168 114-289 97-265 (394)
464 COG4886 Leucine-rich repeat (L 99.3 7.7E-12 1.7E-16 145.6 8.4 144 138-288 97-241 (394)
465 PRK04750 ubiB putative ubiquin 99.2 3.6E-10 7.9E-15 132.4 19.9 143 800-953 119-315 (537)
466 KOG0601 Cyclin-dependent kinas 99.2 3.1E-11 6.8E-16 137.1 7.8 247 802-1072 115-378 (524)
467 KOG3207 Beta-tubulin folding c 99.2 2.8E-12 6.1E-17 138.1 -0.9 161 107-269 118-285 (505)
468 cd05151 ChoK Choline Kinase (C 99.1 1.3E-10 2.7E-15 118.1 9.1 130 807-951 4-136 (170)
469 KOG1909 Ran GTPase-activating 99.1 3.2E-12 6.8E-17 134.4 -3.0 255 101-388 21-310 (382)
470 cd05146 RIO3_euk RIO kinase fa 99.1 1.4E-09 3E-14 110.6 13.8 136 807-953 3-175 (197)
471 PF14580 LRR_9: Leucine-rich r 99.1 5.1E-11 1.1E-15 118.5 3.3 121 544-670 20-147 (175)
472 KOG3207 Beta-tubulin folding c 99.1 2.2E-11 4.9E-16 131.3 -0.3 138 130-268 117-259 (505)
473 COG3642 Mn2+-dependent serine/ 99.0 2E-09 4.3E-14 104.8 11.9 131 807-951 2-140 (204)
474 KOG3087 Serine/threonine prote 99.0 2.7E-09 5.9E-14 103.0 12.6 144 805-952 11-166 (229)
475 KOG1259 Nischarin, modulator o 99.0 5.1E-11 1.1E-15 121.9 0.5 127 545-677 286-413 (490)
476 KOG1259 Nischarin, modulator o 99.0 8.1E-11 1.8E-15 120.4 1.1 131 230-391 283-414 (490)
477 PF14580 LRR_9: Leucine-rich r 99.0 2.5E-10 5.4E-15 113.7 4.0 126 108-263 17-148 (175)
478 cd05154 ACAD10_11_like Acyl-Co 99.0 4.3E-09 9.3E-14 112.0 12.7 142 807-951 4-206 (223)
479 KOG1909 Ran GTPase-activating 98.9 1.8E-10 3.9E-15 121.4 -0.6 218 102-365 50-311 (382)
480 KOG0531 Protein phosphatase 1, 98.9 2.1E-10 4.7E-15 133.6 -1.6 244 132-415 70-321 (414)
481 PF08263 LRRNT_2: Leucine rich 98.9 9.6E-10 2.1E-14 82.2 2.3 38 1-38 5-43 (43)
482 KOG0531 Protein phosphatase 1, 98.9 2.6E-10 5.6E-15 132.9 -1.6 248 107-394 69-323 (414)
483 KOG3741 Poly(A) ribonuclease s 98.9 6.8E-08 1.5E-12 107.3 17.0 168 814-1002 289-475 (655)
484 KOG4658 Apoptotic ATPase [Sign 98.8 4.3E-09 9.3E-14 130.6 7.3 272 111-387 546-830 (889)
485 KOG0601 Cyclin-dependent kinas 98.8 3.8E-09 8.2E-14 120.4 6.0 251 798-1078 262-519 (524)
486 KOG0606 Microtubule-associated 98.8 1.4E-09 3.1E-14 129.6 2.5 249 799-1068 802-1084(1205)
487 COG4248 Uncharacterized protei 98.8 1.6E-07 3.5E-12 101.5 17.7 262 805-1079 15-302 (637)
488 PRK15123 lipopolysaccharide co 98.8 6.4E-08 1.4E-12 104.4 14.1 140 808-951 29-194 (268)
489 PF01163 RIO1: RIO1 family; I 98.8 5.1E-08 1.1E-12 98.9 11.7 126 816-953 1-157 (188)
490 PF13855 LRR_8: Leucine rich r 98.7 6.2E-09 1.3E-13 85.2 3.2 60 544-603 2-61 (61)
491 PF13855 LRR_8: Leucine rich r 98.7 7.2E-09 1.6E-13 84.8 2.5 59 616-674 2-60 (61)
492 KOG4658 Apoptotic ATPase [Sign 98.7 1.7E-08 3.7E-13 125.4 5.5 126 158-287 523-650 (889)
493 COG0478 RIO-like serine/threon 98.6 2E-07 4.3E-12 96.6 11.0 135 803-951 93-251 (304)
494 KOG4579 Leucine-rich repeat (L 98.5 5.2E-09 1.1E-13 95.6 -3.2 108 545-656 29-139 (177)
495 PRK09902 hypothetical protein; 98.5 9.4E-07 2E-11 90.0 12.4 138 810-951 27-179 (216)
496 KOG4579 Leucine-rich repeat (L 98.4 1.7E-08 3.6E-13 92.3 -2.2 137 519-659 28-166 (177)
497 KOG2982 Uncharacterized conser 98.4 4.4E-08 9.5E-13 100.9 0.1 124 97-220 32-159 (418)
498 PF06293 Kdo: Lipopolysacchari 98.3 3.2E-06 7E-11 88.4 11.8 107 841-952 55-171 (206)
499 KOG2137 Protein kinase [Signal 98.3 1.6E-07 3.4E-12 108.6 1.7 152 905-1072 105-264 (700)
500 KOG1859 Leucine-rich repeat pr 98.3 1.1E-08 2.5E-13 116.6 -8.2 159 103-268 102-292 (1096)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.1e-106 Score=1045.78 Aligned_cols=914 Identities=33% Similarity=0.527 Sum_probs=742.8
Q ss_pred CHHHHHHHHhcccCCCCCCCCCCCCCCCCceeeeeEeeCCCCCeeeeecCCCccccccccCCCCCCCCCCCCcccCcCcc
Q 045553 1 KNALLQLKSAITEDPLGLTSNWNPKDTDSCSWHGVTCDPLSGRVTSLNLSSNLSRTSCSLLSLPPAAGPGGNFSFHFPCL 80 (1082)
Q Consensus 1 ~~~l~~~k~~~~~~~~~~~~~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1082)
++||++||+++. +|.+.+++|+. +.|||.|.||+|++ .++|++|||++
T Consensus 31 ~~~l~~~~~~~~-~~~~~~~~w~~-~~~~c~w~gv~c~~-~~~v~~L~L~~----------------------------- 78 (968)
T PLN00113 31 LELLLSFKSSIN-DPLKYLSNWNS-SADVCLWQGITCNN-SSRVVSIDLSG----------------------------- 78 (968)
T ss_pred HHHHHHHHHhCC-CCcccCCCCCC-CCCCCcCcceecCC-CCcEEEEEecC-----------------------------
Confidence 479999999995 78888999974 57899999999985 57999999976
Q ss_pred cccccccCcccCCCCCCccccccccccCCCCCCEEEcccCCCcccCChhhc-CCCCCCEEeCcCCCCCCCCCccccCCCC
Q 045553 81 QLHQHDRGNINSNSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIG-QLSLLEILDLSFNSFHGPIPPTLQNCSS 159 (1082)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~l~~l~~ 159 (1082)
++++|.++++|..+++|++|+|++|++++.+|..+. .+++|++|+|++|.+++.+|. +.+++
T Consensus 79 ---------------~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~ 141 (968)
T PLN00113 79 ---------------KNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPN 141 (968)
T ss_pred ---------------CCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCC
Confidence 456777888899999999999999999988887755 899999999999999988885 56899
Q ss_pred CCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEcc
Q 045553 160 LRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLS 239 (1082)
Q Consensus 160 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 239 (1082)
|++|+|++|.+.+.+|..++.+++|++|+|++|.+.+.+|..+. .+++|++|+|++|++++.+|..++++++|+.|+|+
T Consensus 142 L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 220 (968)
T PLN00113 142 LETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLT-NLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLG 220 (968)
T ss_pred CCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhh-hCcCCCeeeccCCCCcCcCChHHcCcCCccEEECc
Confidence 99999999999999999999999999999999999988888876 68999999999999999999999999999999999
Q ss_pred CCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCC
Q 045553 240 SNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGG 319 (1082)
Q Consensus 240 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~ 319 (1082)
+|++++.+|..|+.+++|++|++++|++++.+|..++++++|++|++++ |.+.+.
T Consensus 221 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~-------------------------n~l~~~ 275 (968)
T PLN00113 221 YNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQ-------------------------NKLSGP 275 (968)
T ss_pred CCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcC-------------------------Ceeecc
Confidence 9999999999999999999999999999999999999999999999977 556677
Q ss_pred CCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-cc
Q 045553 320 LPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SV 398 (1082)
Q Consensus 320 ~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l 398 (1082)
+|.++.++++|+.|++++|.+.+..|..+..+++|++|++++|.+++.+|..+..+++|+.|+|++|++++.+|..+ .+
T Consensus 276 ~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~ 355 (968)
T PLN00113 276 IPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKH 355 (968)
T ss_pred CchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999998888766 67
Q ss_pred CcccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCC
Q 045553 399 PCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPV 478 (1082)
Q Consensus 399 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~ 478 (1082)
++|+.|++++|.+++.+|... |. ..-+..+++++|.+.|.+
T Consensus 356 ~~L~~L~Ls~n~l~~~~p~~~---~~------------------------------------~~~L~~L~l~~n~l~~~~ 396 (968)
T PLN00113 356 NNLTVLDLSTNNLTGEIPEGL---CS------------------------------------SGNLFKLILFSNSLEGEI 396 (968)
T ss_pred CCCcEEECCCCeeEeeCChhH---hC------------------------------------cCCCCEEECcCCEecccC
Confidence 899999999999988777421 00 001234578889999999
Q ss_pred CCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCccccc
Q 045553 479 PPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGL 558 (1082)
Q Consensus 479 p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~ 558 (1082)
|..+..+..+ ..+++.+|.+++. .|..+.....++.|++++|++.+.+|.... .+++|+.|+|++|++.+.
T Consensus 397 p~~~~~~~~L-----~~L~L~~n~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~n~~~~~ 467 (968)
T PLN00113 397 PKSLGACRSL-----RRVRLQDNSFSGE---LPSEFTKLPLVYFLDISNNNLQGRINSRKW-DMPSLQMLSLARNKFFGG 467 (968)
T ss_pred CHHHhCCCCC-----CEEECcCCEeeeE---CChhHhcCCCCCEEECcCCcccCccChhhc-cCCCCcEEECcCceeeee
Confidence 9887766554 4567788887764 566778888999999999999988887655 467899999999999999
Q ss_pred CccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCC
Q 045553 559 IPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKL 638 (1082)
Q Consensus 559 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 638 (1082)
+|..+ ..++|+.|+|++|++++..|..|..+++|+.|+|++|++++.+|..+.++++|++|+|++|++++.+|..|..+
T Consensus 468 ~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 546 (968)
T PLN00113 468 LPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEM 546 (968)
T ss_pred cCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCc
Confidence 88866 46899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCCccc---ccccCCCCCCCCCCCCCCCCCcccccCCCC
Q 045553 639 EHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRNSLI---KCENVQGNPNLQLCHTDPSSSEWERQHSGN 715 (1082)
Q Consensus 639 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~---~~~~~~~Np~~c~c~~~~~~~~~~~~~~~~ 715 (1082)
++|+.|+|++|+++|.+|..+..+++|+.|++++|+++|.+|....+ ....+.|||.. |+..+...
T Consensus 547 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l--c~~~~~~~--------- 615 (968)
T PLN00113 547 PVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDL--CGGDTTSG--------- 615 (968)
T ss_pred ccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccc--cCCccccC---------
Confidence 99999999999999999999999999999999999999999987543 45678999998 55311100
Q ss_pred CCCcccCCCCccccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHhhhhcccCCC--CCCCCCCccceeEEeccccccccH
Q 045553 716 VSQQEAYSPSESIQGNSSGLNPIEIASITSAAVILSVLIALVLLLICMKKFSCN--SIADPGLVRKEVVICNNIGVQLTY 793 (1082)
Q Consensus 716 ~~~~~~~~~~~s~~~~~~~~~~~~i~~i~~~~~~~~~l~~l~~~~~~~rk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1082)
.+++........+ ...+. ++++++++++++++++++++++.... .........+...........+++
T Consensus 616 -------~~~c~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (968)
T PLN00113 616 -------LPPCKRVRKTPSW-WFYIT--CTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITI 685 (968)
T ss_pred -------CCCCcccccccee-eeehh--HHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhH
Confidence 0001000001111 11111 11111112222222222222221111 111100000000000111123445
Q ss_pred HHHHHHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeE
Q 045553 794 ENVVRATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 794 ~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 872 (1082)
+++. ..|+..+.||+|+||.||+|+. .++..||||++...... ..+|++.+++++|||||++++++.+.+..
T Consensus 686 ~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~ 758 (968)
T PLN00113 686 NDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGA 758 (968)
T ss_pred HHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence 5543 4577788999999999999976 57899999998644322 23568889999999999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++|+|.++++. ++|.++.+++.|+|+|++|||+.+.++|+||||||+||+++.++.+++. ||.+...
T Consensus 759 ~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~ 832 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLL 832 (968)
T ss_pred EEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccc
Confidence 999999999999999963 7899999999999999999997777799999999999999999988875 6655433
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
... ....|++.|+|||++.+..++.++|||||||++|||++|+.||+... +......+|++..........+
T Consensus 833 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 904 (968)
T PLN00113 833 CTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF---GVHGSIVEWARYCYSDCHLDMW 904 (968)
T ss_pred ccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCccc---CCCCcHHHHHHHhcCccchhhe
Confidence 211 22368899999999999999999999999999999999999997543 2356778888776666656667
Q ss_pred cccccCCC--CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1033 FTAGLWDC--GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1033 ~d~~l~~~--~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
+|+.+... .+.++..++.+++.+||+.+|++||+|.||+++|+++...
T Consensus 905 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 905 IDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred eCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 77766443 3456677889999999999999999999999999998653
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.9e-56 Score=572.85 Aligned_cols=513 Identities=36% Similarity=0.528 Sum_probs=465.4
Q ss_pred CCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCcccc-CCCCCCeEEccCcccccccCccccCCCCCcEE
Q 045553 109 LTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQ-NCSSLRLINLSGNQFNGTIPAFFGQSPGFQVV 187 (1082)
Q Consensus 109 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 187 (1082)
..+++.|+|++|++++.+|..|..+++|+.|+|++|++++.+|..+. ++++|++|+|++|.+++.+|. +.+++|++|
T Consensus 68 ~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L 145 (968)
T PLN00113 68 SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETL 145 (968)
T ss_pred CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEE
Confidence 35799999999999999999999999999999999999988998765 999999999999999988886 468999999
Q ss_pred EcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcC
Q 045553 188 SLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFL 267 (1082)
Q Consensus 188 ~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 267 (1082)
+|++|.+.+.+|..+. .+++|++|+|++|.+.+.+|..++++++|++|+|++|.+.+.+|..++.+++|++|+|++|++
T Consensus 146 ~Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 224 (968)
T PLN00113 146 DLSNNMLSGEIPNDIG-SFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL 224 (968)
T ss_pred ECcCCcccccCChHHh-cCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCcc
Confidence 9999999999998886 699999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcc
Q 045553 268 SGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQN 347 (1082)
Q Consensus 268 ~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~ 347 (1082)
++.+|..++.+++|++|++++ |.+.+.+|..++++++|++|++++|.+.+..|..
T Consensus 225 ~~~~p~~l~~l~~L~~L~L~~-------------------------n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 279 (968)
T PLN00113 225 SGEIPYEIGGLTSLNHLDLVY-------------------------NNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPS 279 (968)
T ss_pred CCcCChhHhcCCCCCEEECcC-------------------------ceeccccChhHhCCCCCCEEECcCCeeeccCchh
Confidence 999999999999999999987 5566788999999999999999999999999999
Q ss_pred cccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-ccCcccEEEecCCcceecCCCCCCcccccc
Q 045553 348 WELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SVPCMAVFNVSQNLLSGEIPRISHSECSKM 426 (1082)
Q Consensus 348 l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 426 (1082)
+..+++|++|+|++|.+.+.+|..+.++++|+.|++++|.+++.+|..+ .+++|+.|++++|.+.+.+|..-. .
T Consensus 280 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~---- 354 (968)
T PLN00113 280 IFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLG-K---- 354 (968)
T ss_pred HhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHh-C----
Confidence 9999999999999999999999999999999999999999999988876 689999999999999987774210 0
Q ss_pred cccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccc
Q 045553 427 SVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGN 506 (1082)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~ 506 (1082)
..-+..+++++|.++|.+|..+.....+ ..+++++|.+.+.
T Consensus 355 ----------------------------------~~~L~~L~Ls~n~l~~~~p~~~~~~~~L-----~~L~l~~n~l~~~ 395 (968)
T PLN00113 355 ----------------------------------HNNLTVLDLSTNNLTGEIPEGLCSSGNL-----FKLILFSNSLEGE 395 (968)
T ss_pred ----------------------------------CCCCcEEECCCCeeEeeCChhHhCcCCC-----CEEECcCCEeccc
Confidence 0112356899999999999988766554 4567788887653
Q ss_pred cCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCccc
Q 045553 507 LSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSY 586 (1082)
Q Consensus 507 l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 586 (1082)
+|..+....+++.|++++|++.+.+|..+ ..+++|+.|++++|++++.+|..+..+++|+.|+|++|++.+.+|..
T Consensus 396 ---~p~~~~~~~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~ 471 (968)
T PLN00113 396 ---IPKSLGACRSLRRVRLQDNSFSGELPSEF-TKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDS 471 (968)
T ss_pred ---CCHHHhCCCCCCEEECcCCEeeeECChhH-hcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcc
Confidence 56677778899999999999999888765 56788999999999999999999999999999999999999888876
Q ss_pred ccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCccc
Q 045553 587 INKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLS 666 (1082)
Q Consensus 587 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 666 (1082)
+ ..++|+.|++++|++++.+|..|.++++|+.|+|++|++++.+|..+..+++|++|+|++|++++.+|..|..+++|+
T Consensus 472 ~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 550 (968)
T PLN00113 472 F-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLS 550 (968)
T ss_pred c-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCC
Confidence 6 468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCccccCCCCC----cccccccCCCCCCCCC
Q 045553 667 IFDVSFNNLSGSAPRN----SLIKCENVQGNPNLQL 698 (1082)
Q Consensus 667 ~l~ls~N~l~~~~p~~----~~~~~~~~~~Np~~c~ 698 (1082)
.|+|++|+++|.+|.. ..+...++.+|+..+.
T Consensus 551 ~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 586 (968)
T PLN00113 551 QLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGS 586 (968)
T ss_pred EEECCCCcccccCChhHhcCcccCEEeccCCcceee
Confidence 9999999999999974 3456778899998743
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-51 Score=457.97 Aligned_cols=291 Identities=44% Similarity=0.747 Sum_probs=257.2
Q ss_pred ccccccHHHHHHHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeee
Q 045553 787 IGVQLTYENVVRATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYH 866 (1082)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 866 (1082)
....|+++++..||++|...++||+|+||.||+|.+.+|+.||||++........++|..|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 34579999999999999999999999999999999999999999988765433156699999999999999999999999
Q ss_pred ccCC-eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEee
Q 045553 867 VSEA-EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSD 945 (1082)
Q Consensus 867 ~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 945 (1082)
.+.+ +.+||||||++|+|+++++......++|.+|.+||.++|+||+|||+.+.|+||||||||+|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9998 599999999999999999986433889999999999999999999999999999999999999999999999999
Q ss_pred cccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 946 FGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 946 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
||+|+..............||.+|+|||++..+..+.|+|||||||+++|++||+++.+..... ....+..|++..+.
T Consensus 221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~--~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPR--GELSLVEWAKPLLE 298 (361)
T ss_pred ccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCc--ccccHHHHHHHHHH
Confidence 9999665431222111117999999999999999999999999999999999999998865422 34559999999999
Q ss_pred cCCCccccccccC-CCCCh-HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1026 QGRPCEFFTAGLW-DCGPH-DDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1026 ~~~~~~~~d~~l~-~~~~~-~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
++...+++|+.+. ..++. ++..++.+++.+|++.+|.+||+|.||+++|+.+..
T Consensus 299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 9999999999987 55664 688889999999999999999999999999987654
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-44 Score=397.06 Aligned_cols=256 Identities=34% Similarity=0.548 Sum_probs=218.5
Q ss_pred ccccceecccCceEEEEEEEcCCeEEEEEEeecCcccc--HHHHHHHHHHHhccCCCceeeEeeeeccCC-eEEEEEeec
Q 045553 803 FNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQG--VQQFAAEIRTLGRVQHPNLVTLIGYHVSEA-EMFLIYNYL 879 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lV~E~~ 879 (1082)
..+.+.||+|+||+||+|.+.....||||++....... .++|.+|+.++++++|||||+++|+|.+.. ..++|||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 34456699999999999999844449999997654332 568999999999999999999999999887 799999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-eEeccCCCCCEEEcCCC-cEEEeecccceecCCCCC
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPR-VLHRDIKPSNILLDNNL-NAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~~~~ 957 (1082)
++|+|.++++......+++..+.++|.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++......
T Consensus 123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 999999999985567899999999999999999999999 7 99999999999999997 99999999998765432
Q ss_pred ccccCcccCCCcccchhcc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 958 HATTDVAGTFGYVAPEYAM--TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||... ...+.+..+...+....
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~--------~~~~~~~~v~~~~~Rp~---- 266 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDL--------APVQVASAVVVGGLRPP---- 266 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhcCCCCC----
Confidence 2334468999999999999 569999999999999999999999999743 23555555555554333
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.|..+...+..++.+||+.||++||++.|++..|+.+..
T Consensus 267 -----~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 267 -----IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred -----CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 344466789999999999999999999999999998754
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-43 Score=366.16 Aligned_cols=249 Identities=29% Similarity=0.443 Sum_probs=212.0
Q ss_pred cccceecccCceEEEEEEEc-CCeEEEEEEeecC-ccccHHHHHHHHHHHhccCCCceeeEeeeeccCC-eEEEEEeecC
Q 045553 804 NVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG-RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA-EMFLIYNYLP 880 (1082)
Q Consensus 804 ~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lV~E~~~ 880 (1082)
+..+.||+|..|+|||+.++ +++.+|+|.+... +....+++.+|++++++.+||+||+++|+|.... +..++||||.
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD 161 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD 161 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence 34567999999999999654 6899999999543 3455688999999999999999999999999988 5999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHD-ECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
+|||++++... .++++....+|+.++++||.|||+ . +||||||||+|||++..|++||||||.++.+... .
T Consensus 162 gGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~ 233 (364)
T KOG0581|consen 162 GGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---I 233 (364)
T ss_pred CCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhhh---h
Confidence 99999999874 569999999999999999999996 5 9999999999999999999999999999877544 4
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
..+++||..|||||.+.+..|+.++||||||+.++|+.+|+.|+.+... ......+.+..+..+. .++
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~---~~~~~~~Ll~~Iv~~p-pP~-------- 301 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP---PYLDIFELLCAIVDEP-PPR-------- 301 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC---CCCCHHHHHHHHhcCC-CCC--------
Confidence 4567899999999999999999999999999999999999999986522 2334444444444332 222
Q ss_pred CCCh-HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 CGPH-DDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~-~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.|. ..+.++..++..|+++||.+||+++|++++
T Consensus 302 -lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 302 -LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred -CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 233 367899999999999999999999999865
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-43 Score=383.99 Aligned_cols=256 Identities=28% Similarity=0.463 Sum_probs=223.3
Q ss_pred ccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 803 FNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
++..+.||+|-||.||.|.+.....||+|.++... ...+.|.+|+++|++++|++||+++|+|..++.++||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 44567899999999999999977899999998763 34578999999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccC
Q 045553 883 NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTD 962 (1082)
Q Consensus 883 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 962 (1082)
+|.+||+...+..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+....+.......
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~ 363 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG 363 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceeecCC
Confidence 999999987778899999999999999999999999 99999999999999999999999999999666555555555
Q ss_pred cccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 963 VAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 963 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
..-...|.|||.+..++++.|+|||||||+||||+| |+.|+. +....+.+.... ...+-..
T Consensus 364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~--------~msn~ev~~~le----------~GyRlp~ 425 (468)
T KOG0197|consen 364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP--------GMSNEEVLELLE----------RGYRLPR 425 (468)
T ss_pred CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC--------CCCHHHHHHHHh----------ccCcCCC
Confidence 566789999999999999999999999999999998 555554 334445444433 3334456
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
|..++.++.++|..||+.+|++||||..+...++++...
T Consensus 426 P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 426 PEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 788899999999999999999999999999999887543
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-42 Score=379.68 Aligned_cols=248 Identities=24% Similarity=0.396 Sum_probs=216.1
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecC---ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG---RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.+|...+.||+|||+.||.++. .+|..||+|++... .....+.+.+|+++.++++|||||+++++|++....|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688999999999999999976 78999999999764 2344667889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
|+|+.++|..+++. +..+++.+++.++.||+.|+.|||+. +|+|||||..|++++++.++||+|||+|..+..+.
T Consensus 98 ELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 99999999999985 57899999999999999999999999 99999999999999999999999999999886553
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
. ...+.+||+.|.|||++.....+..+||||+|||+|-|+.|++||+.. .+.+....+...+ +
T Consensus 173 E-rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk--------~vkety~~Ik~~~-Y------- 235 (592)
T KOG0575|consen 173 E-RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK--------TVKETYNKIKLNE-Y------- 235 (592)
T ss_pred c-ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc--------hHHHHHHHHHhcC-c-------
Confidence 3 445689999999999999999999999999999999999999999732 2333333332221 1
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..|...+.++.+||..+++.+|.+|||+.+|+.+
T Consensus 236 ---~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 236 ---SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred ---ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 2345667789999999999999999999999864
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-42 Score=362.15 Aligned_cols=200 Identities=31% Similarity=0.558 Sum_probs=181.0
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
...+|.+.+.||+|+||+||+|+.. ++..||||.+... .....+-...|+.+++.++|||||++++++..++..|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 3467889999999999999999654 5899999999766 445566778999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC------CcEEEeecccc
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN------LNAYLSDFGLA 949 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~------~~~kl~DfGla 949 (1082)
||||.||+|.+|++.+ ..+++.+++.++.|+|.||++||++ +||||||||+|||++.. -.+||+|||+|
T Consensus 88 MEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 9999999999999985 4799999999999999999999999 99999999999999864 46899999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDP 1005 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~ 1005 (1082)
+.+.+. ....+.+|++.|||||+++.++|+.|+|+||+|+++|||++|+.||+.
T Consensus 163 R~L~~~--~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 163 RFLQPG--SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhCCch--hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 988633 344567999999999999999999999999999999999999999984
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-43 Score=352.19 Aligned_cols=256 Identities=27% Similarity=0.438 Sum_probs=213.0
Q ss_pred cCccccceecccCceEEEEE-EEcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEee-eeccCCe-EEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIG-YHVSEAE-MFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~-~~~~~~~-~~lV 875 (1082)
..|++.++||+|.||+|||+ ...+|..||.|.+.... ....+....|+.++++++|||||++++ .+.++.+ .++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 45899999999999999999 57789999999997543 345667889999999999999999998 4444444 8999
Q ss_pred EeecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCC-CeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 876 YNYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVP-RVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
|||+..|+|.++++..+ .+.+++.++|+++.|+++||.++|+..++ -|+||||||.||+++.+|.+|++|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 99999999999997543 67899999999999999999999995332 2889999999999999999999999999988
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
..... .....+|||.||+||.+.+..|+.|+||||+||++|||+.-..||.+ .++.+..+. +.++++..+
T Consensus 179 ~s~~t-fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g--------~n~~~L~~K-I~qgd~~~~ 248 (375)
T KOG0591|consen 179 SSKTT-FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYG--------DNLLSLCKK-IEQGDYPPL 248 (375)
T ss_pred cchhH-HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccc--------ccHHHHHHH-HHcCCCCCC
Confidence 65443 34567899999999999999999999999999999999999999973 355554444 344444322
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
..+..+.++.+||..|+..||+.||+...+++.+
T Consensus 249 --------p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 249 --------PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred --------cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 1156788999999999999999999854444443
No 10
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-42 Score=365.59 Aligned_cols=253 Identities=27% Similarity=0.397 Sum_probs=209.5
Q ss_pred hcCccccceecccCceEEEEE-EEcCCeEEEEEEeecCccc-------cHHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQ-------GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
...|.+.+.||+|+||.|-+| +.++|+.||||++...... ......+|+++|++++|||||++++++...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 356788899999999999999 5678999999999654221 12335799999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC---CcEEEeeccc
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN---LNAYLSDFGL 948 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfGl 948 (1082)
.|+|||||+||+|.+.+-.+ ..+.+.....++.|++.|+.|||+. ||+||||||+|||+..+ ..+||+|||+
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred eEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccch
Confidence 99999999999999999875 4577778889999999999999999 99999999999999765 7899999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhcccCCC---CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMTCRV---SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
|+..+ +...+.+.+||+.|.|||++.++.+ ..+.|+||+||++|-+++|.+||.....+ ..+...+.
T Consensus 326 AK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~--------~sl~eQI~ 395 (475)
T KOG0615|consen 326 AKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD--------PSLKEQIL 395 (475)
T ss_pred hhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC--------ccHHHHHh
Confidence 99876 4456778899999999999976543 34789999999999999999999865433 11233344
Q ss_pred cCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1026 QGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.|.+... + ....+..++...+|.+|+..||++||++.|++++
T Consensus 396 ~G~y~f~--p----~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 396 KGRYAFG--P----LQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cCccccc--C----hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 4433311 1 1224667899999999999999999999998763
No 11
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-42 Score=383.63 Aligned_cols=269 Identities=26% Similarity=0.438 Sum_probs=227.5
Q ss_pred ccccHHHHHHHhcC---------ccccceecccCceEEEEEEEcC----CeEEEEEEeecCcc-ccHHHHHHHHHHHhcc
Q 045553 789 VQLTYENVVRATAG---------FNVQNCIGSGGFGATYKAEIIP----GVVVAVKRLSVGRF-QGVQQFAAEIRTLGRV 854 (1082)
Q Consensus 789 ~~~~~~~~~~~~~~---------~~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l 854 (1082)
..++|+|-.++... ..|.++||.|.||.||+|+++. ...||||.++.... ....+|..|+.+|.++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 45677776655544 4578999999999999997653 46799999987754 4457899999999999
Q ss_pred CCCceeeEeeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEE
Q 045553 855 QHPNLVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNIL 934 (1082)
Q Consensus 855 ~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nil 934 (1082)
.||||+++.|+.......++|.|||++|+|+.||+.+. ..+++.+...++++||.||.||-++ ++|||||.++|||
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNIL 763 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNIL 763 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhhhhhee
Confidence 99999999999999999999999999999999999985 4599999999999999999999999 9999999999999
Q ss_pred EcCCCcEEEeecccceecCCCCCccccCccc--CCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCC
Q 045553 935 LDNNLNAYLSDFGLARLLGTSETHATTDVAG--TFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFG 1011 (1082)
Q Consensus 935 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~ 1011 (1082)
++.+..+||+|||+++.+.++.....+..-| ..+|.|||.+...++|.++||||||+||||.++ |.+||.....
T Consensus 764 VNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--- 840 (996)
T KOG0196|consen 764 VNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--- 840 (996)
T ss_pred eccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch---
Confidence 9999999999999999886554333333333 469999999999999999999999999999775 8888874422
Q ss_pred CCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1012 NGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1012 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.+.+ ..++...+-+.|++++..+.+||++||++|-.+||++.+|+.+|.++..
T Consensus 841 -----QdVI----------kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 841 -----QDVI----------KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred -----HHHH----------HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 1222 2334445556789999999999999999999999999999999987543
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=349.60 Aligned_cols=242 Identities=27% Similarity=0.383 Sum_probs=208.3
Q ss_pred hcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.+.|++.++||+|+||+||.++ ..+++.+|+|++++... .+.+...+|..++.+++||.||+++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 4579999999999999999995 45689999999976532 4467788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
+||+.||.|..+|+. ...+++..+.-++.+|+.||.|||+. +|||||+||+|||+|.+|+++|+|||+++..-..
T Consensus 104 ld~~~GGeLf~hL~~--eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQR--EGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EeccCCccHHHHHHh--cCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 999999999999987 45799999999999999999999999 9999999999999999999999999999864333
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.....+++||+.|||||++.+..|+..+|+||+|+++|||++|.+||.. .+...+.+.+..+. ..
T Consensus 179 -~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~--------~~~~~~~~~I~~~k-~~----- 243 (357)
T KOG0598|consen 179 -GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA--------EDVKKMYDKILKGK-LP----- 243 (357)
T ss_pred -CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC--------ccHHHHHHHHhcCc-CC-----
Confidence 2344558999999999999999999999999999999999999999973 34455655555443 11
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCC
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRP 1065 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RP 1065 (1082)
..|.-...+...++.+.++.+|++|-
T Consensus 244 ----~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 244 ----LPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ----CCCccCCHHHHHHHHHHhccCHHHhc
Confidence 12223456889999999999999995
No 13
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.9e-44 Score=376.33 Aligned_cols=494 Identities=23% Similarity=0.329 Sum_probs=330.7
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSL 189 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (1082)
..|+.|.|++|.+. .+-+.+.++.-|++|++.+|++. ..|.+++.+..++.|+.++|+++ .+|..++.+.+|..|+.
T Consensus 45 v~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 45 VDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDC 121 (565)
T ss_pred cchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhc
Confidence 44566666666665 44445666666666666666666 56666666666666666666666 56666666666666666
Q ss_pred ccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcc
Q 045553 190 SFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSG 269 (1082)
Q Consensus 190 ~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 269 (1082)
++|++. .+|+.++ .+..|+.|+..+|+++ ..|..++.+.+|..|++.+|+++...|+.+. ++.|++||..+|-++
T Consensus 122 s~n~~~-el~~~i~-~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~- 196 (565)
T KOG0472|consen 122 SSNELK-ELPDSIG-RLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE- 196 (565)
T ss_pred ccccee-ecCchHH-HHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-
Confidence 666666 5555555 3556666666666666 5566666666666666666666644444443 666666666666665
Q ss_pred cCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccc
Q 045553 270 IVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWE 349 (1082)
Q Consensus 270 ~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~ 349 (1082)
.+|..++.+.+|..|+++.|.+. .+| +|.++..|++|++..|.|.....+...
T Consensus 197 tlP~~lg~l~~L~~LyL~~Nki~--------------------------~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~ 249 (565)
T KOG0472|consen 197 TLPPELGGLESLELLYLRRNKIR--------------------------FLP-EFPGCSLLKELHVGENQIEMLPAEHLK 249 (565)
T ss_pred cCChhhcchhhhHHHHhhhcccc--------------------------cCC-CCCccHHHHHHHhcccHHHhhHHHHhc
Confidence 55666666666666666665443 233 456666677777777777666656666
Q ss_pred cccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcceecCCCCCCccccccccc
Q 045553 350 LCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLSGEIPRISHSECSKMSVN 429 (1082)
Q Consensus 350 ~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 429 (1082)
.+++|..|||++|+++ ..|+.++-+.+|++||+|+|.|++.+++...+ .|+.|-+.||++...--++- .|....+
T Consensus 250 ~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii--~~gT~~v- 324 (565)
T KOG0472|consen 250 HLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREII--SKGTQEV- 324 (565)
T ss_pred ccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchHHHHHHHH--cccHHHH-
Confidence 7788888888888888 77888888888888888888888777776666 78888888888752111000 0000000
Q ss_pred ccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCC
Q 045553 430 WSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLST 509 (1082)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~ 509 (1082)
+...+. ... |...+.+..+-..-.+ ...+.+|+. -..+....+.+++ .+++.
T Consensus 325 -------LKyLrs------~~~-~dglS~se~~~e~~~t----~~~~~~~~~------~~~i~tkiL~~s~----~qlt~ 376 (565)
T KOG0472|consen 325 -------LKYLRS------KIK-DDGLSQSEGGTETAMT----LPSESFPDI------YAIITTKILDVSD----KQLTL 376 (565)
T ss_pred -------HHHHHH------hhc-cCCCCCCcccccccCC----CCCCcccch------hhhhhhhhhcccc----ccccc
Confidence 000000 000 0000100000000000 001111110 0001111111221 24678
Q ss_pred cccccccCCc---eeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCccc
Q 045553 510 YPFDLCLSLD---GLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSY 586 (1082)
Q Consensus 510 ~p~~~~~~~~---l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 586 (1082)
+|.+++.... ...++++.|++. ++|..+...-.-++.+.+++|.+. .+|..++.+++|..|+|++|-+. .+|..
T Consensus 377 VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e 453 (565)
T KOG0472|consen 377 VPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEE 453 (565)
T ss_pred CCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchh
Confidence 8888877766 789999999999 899888755444566777777776 77889999999999999999998 78999
Q ss_pred ccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCccc
Q 045553 587 INKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLS 666 (1082)
Q Consensus 587 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 666 (1082)
++.+..|+.|++|.|+|. .+|...-.+..|+.+-.++|++....|..+.++.+|.+|||.+|.|. .+|+.++++++|+
T Consensus 454 ~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~ 531 (565)
T KOG0472|consen 454 MGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLR 531 (565)
T ss_pred hhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhcccccee
Confidence 999999999999999999 89999888888999989999999777777999999999999999999 8999999999999
Q ss_pred EEeccCCccc
Q 045553 667 IFDVSFNNLS 676 (1082)
Q Consensus 667 ~l~ls~N~l~ 676 (1082)
.|++.+|++.
T Consensus 532 hLeL~gNpfr 541 (565)
T KOG0472|consen 532 HLELDGNPFR 541 (565)
T ss_pred EEEecCCccC
Confidence 9999999998
No 14
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.2e-40 Score=379.36 Aligned_cols=256 Identities=27% Similarity=0.452 Sum_probs=217.2
Q ss_pred CccccceecccCceEEEEEEEc------CCeEEEEEEeecCccc-cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRFQ-GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
+....+.||+|+||+||+|+.. +...||||.++..... ..++|++|++.++.++|||||+++|.|.+++.+++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 4456678999999999999643 3478999999876554 67899999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCC--------CCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEE
Q 045553 875 IYNYLPGGNLEKFIQDRP--------RRT----VEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAY 942 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~--------~~~----l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 942 (1082)
|+|||..|+|.+||+.+. +.. ++..+.+.||.|||.||+||-++ .+|||||..+|+||.++..||
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEE
Confidence 999999999999998643 223 88899999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCcccc-CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHH
Q 045553 943 LSDFGLARLLGTSETHATT-DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWA 1020 (1082)
Q Consensus 943 l~DfGla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1020 (1082)
|+|||+++..-..+.+... ...-..+|||||.++.++++.++|||||||++||+++ |+-|+... .-.+ +
T Consensus 644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl--------Sn~E-V 714 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL--------SNQE-V 714 (774)
T ss_pred ecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccccc--------chHH-H
Confidence 9999999976554444332 3445679999999999999999999999999999998 67776532 1122 3
Q ss_pred HHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1021 SMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1021 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...+++|.+. +.|+.++.++..||..||+..|++||+++||-..|+...
T Consensus 715 Ie~i~~g~lL---------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 715 IECIRAGQLL---------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred HHHHHcCCcc---------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 3344555443 467889999999999999999999999999999998754
No 15
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=370.43 Aligned_cols=396 Identities=25% Similarity=0.251 Sum_probs=289.6
Q ss_pred CCCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCccccc
Q 045553 93 NSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNG 172 (1082)
Q Consensus 93 ~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 172 (1082)
.++..+.|-+|+ +-+.|++++|.+...-+..|.++++|++++|..|.++ .+|.......+|+.|+|.+|.|+.
T Consensus 67 ~~~~~l~g~lp~------~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~s 139 (873)
T KOG4194|consen 67 IDKSRLKGFLPS------QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISS 139 (873)
T ss_pred ccccccCCcCcc------ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeecccccc
Confidence 344556666664 4567888888888777777888888888888888888 788766666778888888888887
Q ss_pred ccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCcccc
Q 045553 173 TIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFG 252 (1082)
Q Consensus 173 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 252 (1082)
.-...+..++.|+.|||+.|.|+ .+|..-+..-.++++|+|++|+|+..-...|.++.+|..|.|++|+++...+..|.
T Consensus 140 v~se~L~~l~alrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk 218 (873)
T KOG4194|consen 140 VTSEELSALPALRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFK 218 (873)
T ss_pred ccHHHHHhHhhhhhhhhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhh
Confidence 66777888888888888888887 66655544456677777777777766666777777777777777777755566677
Q ss_pred CCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcE
Q 045553 253 QLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRV 332 (1082)
Q Consensus 253 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~ 332 (1082)
+|++|+.|+|..|+|.-.--.. |.+|++|+.
T Consensus 219 ~L~~L~~LdLnrN~irive~lt-------------------------------------------------FqgL~Sl~n 249 (873)
T KOG4194|consen 219 RLPKLESLDLNRNRIRIVEGLT-------------------------------------------------FQGLPSLQN 249 (873)
T ss_pred hcchhhhhhccccceeeehhhh-------------------------------------------------hcCchhhhh
Confidence 7777777777777775221223 445555556
Q ss_pred EEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcce
Q 045553 333 FWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLS 412 (1082)
Q Consensus 333 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~ 412 (1082)
|.+..|+|......+|..|.+++.|+|+.|+++..--.++.++++|+.|+||+|.|....++.+
T Consensus 250 lklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~W---------------- 313 (873)
T KOG4194|consen 250 LKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSW---------------- 313 (873)
T ss_pred hhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchh----------------
Confidence 6666666666667778888888888888888886667778888888888888888763322221
Q ss_pred ecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccc
Q 045553 413 GEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRP 492 (1082)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~ 492 (1082)
T Consensus 314 -------------------------------------------------------------------------------- 313 (873)
T KOG4194|consen 314 -------------------------------------------------------------------------------- 313 (873)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEE
Q 045553 493 YYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNL 572 (1082)
Q Consensus 493 ~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 572 (1082)
..+++|++|+|+.|+|+...++.|..+..|++|
T Consensus 314 -----------------------------------------------sftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~L 346 (873)
T KOG4194|consen 314 -----------------------------------------------SFTQKLKELDLSSNRITRLDEGSFRVLSQLEEL 346 (873)
T ss_pred -----------------------------------------------hhcccceeEeccccccccCChhHHHHHHHhhhh
Confidence 112446777777777777777777777777777
Q ss_pred EccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCc---hhhhcCcccchhhccCcccCCCCCccccCCcccceecccCc
Q 045553 573 NLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIP---WELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHN 649 (1082)
Q Consensus 573 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 649 (1082)
+|++|.|+.+....|..+.+|+.|||++|.|+..+. ..|.+|++|+.|+|.+|+|+.+...+|.+++.|+.|||.+|
T Consensus 347 nLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~N 426 (873)
T KOG4194|consen 347 NLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDN 426 (873)
T ss_pred cccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCC
Confidence 777777776666677777777777777777765443 34788999999999999998666788999999999999999
Q ss_pred ccCCCCCCCCCCCCcccEEeccCCccccCCCCCcccccccCCCCCCCCCCCCCCCCCcccc
Q 045553 650 NLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRNSLIKCENVQGNPNLQLCHTDPSSSEWER 710 (1082)
Q Consensus 650 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~Np~~c~c~~~~~~~~~~~ 710 (1082)
.|..+-|+.|..+ .|+.|-+..-. .+|||. ..|...|..
T Consensus 427 aiaSIq~nAFe~m-~Lk~Lv~nSss--------------------flCDCq-l~Wl~qWl~ 465 (873)
T KOG4194|consen 427 AIASIQPNAFEPM-ELKELVMNSSS--------------------FLCDCQ-LKWLAQWLY 465 (873)
T ss_pred cceeecccccccc-hhhhhhhcccc--------------------eEEecc-HHHHHHHHH
Confidence 9998889999888 88888764332 358888 666666643
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-40 Score=351.10 Aligned_cols=260 Identities=25% Similarity=0.372 Sum_probs=208.8
Q ss_pred HhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCccccHH-HHHHHHHHHhccC-CCceeeEeeeeccCC-eEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQGVQ-QFAAEIRTLGRVQ-HPNLVTLIGYHVSEA-EMFL 874 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~~~~-~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~l 874 (1082)
..++|.+.++||.|+||.||+|+ ..+|..||||+++..-....+ -=.||+..+++++ ||||+++.+++.+.+ ..|+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 34679999999999999999995 557999999999765433222 2368999999999 999999999999888 9999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||| ..+|+++++++ ++.+++..++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+||....
T Consensus 88 VfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 88 VFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccccc
Confidence 99999 67999999998 88999999999999999999999999 999999999999999999999999999998754
Q ss_pred CCCccccCcccCCCcccchhcc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC-c-c
Q 045553 955 SETHATTDVAGTFGYVAPEYAM-TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP-C-E 1031 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 1031 (1082)
.. ..+.++.|..|+|||++. .+.|+.+.||||+|||++|+.+-++-|.+.. ++.+..+..-.-|.+ . +
T Consensus 163 kp--PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s-------E~Dqi~KIc~VLGtP~~~~ 233 (538)
T KOG0661|consen 163 KP--PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS-------EIDQIYKICEVLGTPDKDS 233 (538)
T ss_pred CC--CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc-------HHHHHHHHHHHhCCCcccc
Confidence 43 345678999999999875 5789999999999999999999988776421 111211111111111 1 1
Q ss_pred ccc-----------------cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 FFT-----------------AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~d-----------------~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+.. ..+..-. ..+..++.+++.+|+++||++|||++|++++
T Consensus 234 ~~eg~~La~~mnf~~P~~~~~~l~~L~-p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 234 WPEGYNLASAMNFRFPQVKPSPLKDLL-PNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred chhHHHHHHHhccCCCcCCCCChHHhC-cccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 111 0000001 2367889999999999999999999999875
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-39 Score=347.64 Aligned_cols=256 Identities=27% Similarity=0.436 Sum_probs=210.9
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCC--eEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA--EMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lV~E 877 (1082)
.+|...+.||+|+||+||++... +|...|||..........+.+.+|+.++++++|||||+++|...... .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35777899999999999999654 48999999987664333677899999999999999999999855544 6999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-CCcEEEeecccceecCC--
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-NLNAYLSDFGLARLLGT-- 954 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGla~~~~~-- 954 (1082)
|+++|+|.+++...++ .+++..+..+..||++||+|||++ +|+||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999998766 899999999999999999999999 9999999999999999 79999999999987653
Q ss_pred CCCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
........+.||+.|||||++..+ ....++||||+||++.||+||+.||... ....+++-........+
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-------~~~~~~~~~ig~~~~~P--- 242 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-------FEEAEALLLIGREDSLP--- 242 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-------cchHHHHHHHhccCCCC---
Confidence 222334457899999999999963 3345999999999999999999998732 22233333333333222
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
..|...+.+..+++.+|++.+|++|||+.|++++-.-
T Consensus 243 ------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 243 ------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred ------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 2345567789999999999999999999999987543
No 18
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.8e-39 Score=324.50 Aligned_cols=259 Identities=24% Similarity=0.306 Sum_probs=203.1
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
+.|+...++|+|+||+|||++.+ +|+.||||++.... ....+-..+|++++++++|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 35777788999999999999654 69999999996543 2334556899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|++. ++.+-+..+ ...++.+.+.+++.|++.|+.|+|++ ++|||||||+|||++.++.+|+||||+|+.+.. ..
T Consensus 82 ~~dh-TvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pg 155 (396)
T KOG0593|consen 82 YCDH-TVLHELERY-PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PG 155 (396)
T ss_pred ecch-HHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-Cc
Confidence 9955 665666655 45789999999999999999999999 999999999999999999999999999998864 33
Q ss_pred ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC-------
Q 045553 958 HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP------- 1029 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 1029 (1082)
...+.++.|..|+|||.+.+ ..|....||||.||++.||++|.+-|.... ++.+.......-|+.
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S-------DiDQLy~I~ktLG~L~prhq~i 228 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRS-------DIDQLYLIRKTLGNLIPRHQSI 228 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcc-------hHHHHHHHHHHHcccCHHHHHH
Confidence 45567889999999999987 789999999999999999999988775321 122222111111111
Q ss_pred -------ccccccccCCC-----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1030 -------CEFFTAGLWDC-----GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1030 -------~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
..+.-+..... .-+.....+..++..|++.||++|++-+|++.
T Consensus 229 F~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 229 FSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred hccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 00100111110 11233457899999999999999999988864
No 19
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=356.24 Aligned_cols=266 Identities=24% Similarity=0.354 Sum_probs=214.5
Q ss_pred HHHHHHHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCC
Q 045553 793 YENVVRATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 793 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 870 (1082)
.++.....+.+.+.+.||+|.||+||+|+|. ..||||++.... .+..+.|+.|+.++++-+|.||+-+.|||....
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 3444445556678899999999999999996 479999997654 356788999999999999999999999999887
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
. .+|..+++|.+|+.++|.. +..++..+.+.||.|||+||.|||.+ +|||||||..||++.+++.|||+|||++.
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLat 536 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLAT 536 (678)
T ss_pred e-eeeehhccCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEeccccee
Confidence 7 9999999999999999987 46799999999999999999999999 99999999999999999999999999997
Q ss_pred ecCCC-CCccccCcccCCCcccchhccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 951 LLGTS-ETHATTDVAGTFGYVAPEYAMT---CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 951 ~~~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
....- .........|...|||||+++. .+|++.+||||||+|+|||++|..||.... . .+.+. ++..
T Consensus 537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~-~-------dqIif-mVGr 607 (678)
T KOG0193|consen 537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN-R-------DQIIF-MVGR 607 (678)
T ss_pred eeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC-h-------hheEE-Eecc
Confidence 54321 1122334568889999999975 368899999999999999999999997211 1 11111 1111
Q ss_pred CCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1027 GRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1027 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
|-. +.|.. .....+++++.+|+..||..++++||.+.+|+.+|+++.+
T Consensus 608 G~l--~pd~s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 608 GYL--MPDLS---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccc--Cccch---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 110 11110 1123567899999999999999999999999999988766
No 20
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-39 Score=352.33 Aligned_cols=250 Identities=23% Similarity=0.418 Sum_probs=217.1
Q ss_pred cCccccceecccCceEEEEE-EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
..|+..++||+|+.|.||.| +..+++.||||++........+-+.+|+.+|+..+|+|||++++.|...++.|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 35777789999999999999 56678999999998877777778899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
+||+|.+.+... .+++.++..|+.++++||+|||.. +|+|||||.+|||++.+|.+||+|||++..+..... .
T Consensus 353 ~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-K 425 (550)
T KOG0578|consen 353 EGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-K 425 (550)
T ss_pred CCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC-c
Confidence 999999999864 599999999999999999999999 999999999999999999999999999998765544 4
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....+||+.|||||+.....|+.|.||||||+|++||+-|.+||-. +...+-+..+...|.+ +.
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln--------E~PlrAlyLIa~ng~P-~l------- 489 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN--------ENPLRALYLIATNGTP-KL------- 489 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC--------CChHHHHHHHhhcCCC-Cc-------
Confidence 5668899999999999999999999999999999999999999862 2233333444334322 11
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..++..+..+.+++.+|++.|+++||++.|++++
T Consensus 490 k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 490 KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 2345567789999999999999999999999875
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=335.75 Aligned_cols=261 Identities=27% Similarity=0.421 Sum_probs=216.5
Q ss_pred cCccccceecccCceEEEEEE-EcCCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..|++.+.||.|..++||+|. ...+..||||++..++. ...+.+.+|+..++.++||||++++..|..+...|+||.|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence 468999999999999999994 66789999999987654 3468899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
|.+||+.+.+.......+++..+..|.+++++||.|||++ |.||||||+.|||++.+|.|||+|||.+..+......
T Consensus 106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 9999999999988778899999999999999999999999 9999999999999999999999999998766443322
Q ss_pred c---ccCcccCCCcccchhcc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 959 A---TTDVAGTFGYVAPEYAM--TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 959 ~---~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
. ....+||+.|||||+++ -..|+.|+||||||+...|+.+|..||... ...+..-..+ ++.++...
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~--------pPmkvLl~tL-qn~pp~~~ 253 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKY--------PPMKVLLLTL-QNDPPTLL 253 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccC--------ChHHHHHHHh-cCCCCCcc
Confidence 1 14568999999999954 357999999999999999999999999732 2233333333 33343332
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...+..+........+.+++..|+..||++|||++++++.
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 2222222223445689999999999999999999998753
No 22
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=346.51 Aligned_cols=252 Identities=23% Similarity=0.372 Sum_probs=210.6
Q ss_pred HHhcCccccceecccCceEEEEE-EEcCCeEEEEEEeecC---ccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeE
Q 045553 798 RATAGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVG---RFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 872 (1082)
+...+|.+.+.||+|+|++|++| +..+++.+|||++.+. +....+-+.+|-++|.++ .||.|++++..|+++...
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 34567999999999999999999 4567999999998643 223344567888899999 899999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
|+|+||+++|+|.++++.. ..+++...+.++.+|+.|++|||+. |||||||||+|||+|+|++++|+|||.|+.+
T Consensus 150 YFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred EEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccC
Confidence 9999999999999999985 5799999999999999999999999 9999999999999999999999999999988
Q ss_pred CCCCCc------------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHH
Q 045553 953 GTSETH------------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWA 1020 (1082)
Q Consensus 953 ~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~ 1020 (1082)
...... ....++||..|.+||++.....+..+|+|+|||++|+|+.|++||..... + ...
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-------y-liF 296 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-------Y-LIF 296 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-------H-HHH
Confidence 532111 12458999999999999999999999999999999999999999974321 1 111
Q ss_pred HHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1021 SMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1021 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+.++. +.-..|+..++.+.+|+.+.+..||.+|++..||.++
T Consensus 297 qkI~~-----------l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 297 QKIQA-----------LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHHH-----------hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 11111 0112344555788999999999999999999988765
No 23
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.6e-38 Score=344.75 Aligned_cols=247 Identities=28% Similarity=0.435 Sum_probs=216.5
Q ss_pred cCccccceecccCceEEEEEE-EcCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
++|.+.+.||+|+||.||||+ ..+.+.||+|.+.+..+ ++.+.+.+|++++++++||||+.++++|+...+.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 468888999999999999995 55689999999965543 446678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+.| +|..++.. ...++++.+..|+.+++.||.|||+. +|.|||+||.||+++..+.+|+||||+|+.+.. ..
T Consensus 82 ~a~g-~L~~il~~--d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ--DGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NT 154 (808)
T ss_pred hhhh-hHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-Cc
Confidence 9965 99999988 56799999999999999999999999 999999999999999999999999999998865 34
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
...+...||+.|||||+..++.|+..+|+||+||++|||++|++||. ...+.+.++.+..+.-
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~--------a~si~~Lv~~I~~d~v--------- 217 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFY--------ARSITQLVKSILKDPV--------- 217 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCch--------HHHHHHHHHHHhcCCC---------
Confidence 45667889999999999999999999999999999999999999997 3356666666655431
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+|......+..++...+..||..|-+-.+++.+
T Consensus 218 --~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 218 --KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred --CCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 1345677889999999999999999998877643
No 24
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.7e-37 Score=309.14 Aligned_cols=260 Identities=24% Similarity=0.390 Sum_probs=208.4
Q ss_pred cCccccceecccCceEEEEE-EEcCCeEEEEEEeecCcccc--HHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQG--VQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.+|...+++|+|.||.||+| ...+|+.||||+++.....+ .....+|++.++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 35777889999999999999 46679999999998764432 3456899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
||+ .+|+..+++. ...++...+..++.++++|++|+|++ .|+||||||.|+|++++|.+||+|||+|+.++....
T Consensus 82 fm~-tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred ecc-ccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 995 6999999886 56799999999999999999999999 999999999999999999999999999999976655
Q ss_pred ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC--ccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP--CEFFT 1034 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d 1034 (1082)
..... +-|..|+|||.+.| +.|+...||||.||++.||+-|.+-|.+. -++.|.....-.-|.+ ..+-+
T Consensus 157 ~~~~~-V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~-------sDidQL~~If~~LGTP~~~~WP~ 228 (318)
T KOG0659|consen 157 IQTHQ-VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD-------SDIDQLSKIFRALGTPTPDQWPE 228 (318)
T ss_pred ccccc-eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC-------chHHHHHHHHHHcCCCCcccCcc
Confidence 44333 67999999999887 56999999999999999999998666432 2233333322222211 11111
Q ss_pred ccc-------C-------CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 AGL-------W-------DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l-------~-------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
-.- + ...=..+...+.+++..++..+|.+|.++.|++++
T Consensus 229 ~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 229 MTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 100 0 00012345667999999999999999999999875
No 25
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-37 Score=329.31 Aligned_cols=268 Identities=28% Similarity=0.458 Sum_probs=208.5
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHh--ccCCCceeeEeeeeccCC----eEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLG--RVQHPNLVTLIGYHVSEA----EMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~l~~~~~~~~----~~~l 874 (1082)
...+..++||+|.||.||||.+. ++.||||++.. +..+.|+.|-++.+ .++|+||++++++-.... +++|
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34566788999999999999887 69999999874 44566777777665 458999999999876555 8999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDEC------VPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
|+||.+.|+|.+||..+ .++|....+|+..+++||+|||+.. +|+|+|||||++|||+..|+++.|+|||+
T Consensus 286 Vt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred EeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 99999999999999965 7999999999999999999999764 47899999999999999999999999999
Q ss_pred ceecCCCCCc-cccCcccCCCcccchhcccCC-CC-----chhhHHHHHHHHHHHHhCCCCCCCC--------cc-CCCC
Q 045553 949 ARLLGTSETH-ATTDVAGTFGYVAPEYAMTCR-VS-----DKADVYSFGVVLLELISDKKALDPS--------FC-SFGN 1012 (1082)
Q Consensus 949 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~-----~~~Dv~slGvll~elltg~~p~~~~--------~~-~~~~ 1012 (1082)
|..+...... .....+||.+|||||++.+.. .. .+.||||+|.|+|||+++..-+++. |. ..+.
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 9988654432 223368999999999998643 22 3689999999999999987655421 11 1122
Q ss_pred CccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1013 GFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
...+.+.-..++++...+.+-|.-.. ...+..+.+.+..||+.||+.|-|+.=|.+.+.++..
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~----h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRK----HAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhc----CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 33444444444444444433332221 2446779999999999999999999888888777654
No 26
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.6e-37 Score=352.30 Aligned_cols=261 Identities=24% Similarity=0.379 Sum_probs=207.6
Q ss_pred hcCccccceecccCceEEEEEEE------cCCeEEEEEEeecCcc-ccHHHHHHHHHHHhcc-CCCceeeEeeeeccC-C
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI------IPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSE-A 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~ 870 (1082)
.++|++.++||+|+||.||+|.. .+++.||||++..... ...+.+.+|+++++++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 45799999999999999999963 2356899999875432 3346788999999999 899999999988764 4
Q ss_pred eEEEEEeecCCCCHHHHHhhCC----------------------------------------------------------
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRP---------------------------------------------------------- 892 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~---------------------------------------------------------- 892 (1082)
..++||||+++|+|.++++...
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 6899999999999999997532
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc-cccCcccCCCc
Q 045553 893 --RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGY 969 (1082)
Q Consensus 893 --~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y 969 (1082)
...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ......++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 13478889999999999999999999 9999999999999999999999999999865432221 22234567889
Q ss_pred ccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHH
Q 045553 970 VAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIE 1048 (1082)
Q Consensus 970 ~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 1048 (1082)
+|||++.+..++.++|||||||++|||++ |..||...... .........+... ..+...+..
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~ 305 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--------EEFCQRLKDGTRM---------RAPENATPE 305 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--------HHHHHHHhcCCCC---------CCCCCCCHH
Confidence 99999999999999999999999999997 99998642111 1111222222211 112334567
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1049 MLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1049 l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
+.+++.+||+.+|++||++.||++.|+++...
T Consensus 306 l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 306 IYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 89999999999999999999999999987653
No 27
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-37 Score=335.68 Aligned_cols=260 Identities=27% Similarity=0.372 Sum_probs=208.4
Q ss_pred cCccccceecccCceEEEEE-EEcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV 875 (1082)
..|+..++||+|+||.||+| +..+|+.||+|++.... ........+|+.+++++.||||+++.+...+. ...|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 34677789999999999999 56789999999997664 34456678999999999999999999988876 689999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
+|||+ -+|.-++... .-.+++.++..++.|++.||.|+|+. +|+|||||.+|||||.+|.+||+|||+|+++...
T Consensus 197 FeYMd-hDL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 197 FEYMD-HDLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred Eeccc-chhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 99995 5898888754 56799999999999999999999999 9999999999999999999999999999998877
Q ss_pred CCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc-
Q 045553 956 ETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF- 1033 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1033 (1082)
.....+..+-|..|+|||.+.+ ..|+.+.|+||.|||+.||++|++.|.... .+.|.-.....-|.+.+..
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t-------EveQl~kIfklcGSP~e~~W 344 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT-------EVEQLHKIFKLCGSPTEDYW 344 (560)
T ss_pred CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc-------HHHHHHHHHHHhCCCChhcc
Confidence 7666788889999999999987 579999999999999999999999886432 1122111111111111100
Q ss_pred ---ccc----cC--CCCC-------hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1034 ---TAG----LW--DCGP-------HDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1034 ---d~~----l~--~~~~-------~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
+-. +. ..+. ...+....+|+..++..||++|.|+.++++
T Consensus 345 ~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 345 PVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 000 00 0111 122456788999999999999999998875
No 28
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=344.33 Aligned_cols=240 Identities=28% Similarity=0.411 Sum_probs=206.3
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCHH
Q 045553 806 QNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNLE 885 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 885 (1082)
.+-||.|+.|.||+|++. ++.||||+++.- -..+++.+++++||||+.+.|+|....-+||||||+..|-|+
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 456999999999999987 789999986532 245788999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCccc
Q 045553 886 KFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVAG 965 (1082)
Q Consensus 886 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~g 965 (1082)
.+|+. ++.++......|..+||.||.|||.+ .|||||||+-||||..+..+||+|||.++..... ..+..++|
T Consensus 201 ~VLka--~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFaG 273 (904)
T KOG4721|consen 201 EVLKA--GRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFAG 273 (904)
T ss_pred HHHhc--cCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhhh
Confidence 99998 56788899999999999999999999 9999999999999999999999999999876543 34566899
Q ss_pred CCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHH
Q 045553 966 TFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDD 1045 (1082)
Q Consensus 966 t~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 1045 (1082)
|..|||||++.+...++|.||||||||+|||+||..||...... ..++ | +=...+.-..|..+
T Consensus 274 TVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss--------AIIw-----G----VGsNsL~LpvPstc 336 (904)
T KOG4721|consen 274 TVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS--------AIIW-----G----VGSNSLHLPVPSTC 336 (904)
T ss_pred hHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh--------eeEE-----e----ccCCcccccCcccC
Confidence 99999999999999999999999999999999999998743211 0000 0 01112233457788
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1046 LIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1046 ~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
++.++-|++.||+..|..||+|.+++.+|+-.
T Consensus 337 P~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 337 PDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred chHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 89999999999999999999999999999744
No 29
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-37 Score=345.64 Aligned_cols=248 Identities=28% Similarity=0.416 Sum_probs=209.0
Q ss_pred HhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecC----cc-ccHHHHHHHHHHHhccC-CCceeeEeeeeccCCe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVG----RF-QGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 871 (1082)
..++|.+.+.||+|+||+|+.|. ..++..||+|++... .. ...+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 45689999999999999999994 556899999977553 11 23456778999999999 9999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC-CcEEEeecccce
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN-LNAYLSDFGLAR 950 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla~ 950 (1082)
.++||||+.+|+|.+++.. ..++.+..+.+++.|++.|++|+|+. +|+||||||+||+++.+ +++||+|||++.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 9999999999999999998 45788899999999999999999999 99999999999999999 999999999999
Q ss_pred ecCCCCCccccCcccCCCcccchhcccCC-CC-chhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMTCR-VS-DKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
... .......+.+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+.. +....... +..+.
T Consensus 170 ~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~--------~~~~l~~k-i~~~~ 239 (370)
T KOG0583|consen 170 ISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS--------NVPNLYRK-IRKGE 239 (370)
T ss_pred ccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc--------cHHHHHHH-HhcCC
Confidence 874 2334556679999999999999977 75 7899999999999999999999842 22222222 22222
Q ss_pred CccccccccCCCCChHH-HHHHHHHHHHcccCCCCCCCCHHHHH
Q 045553 1029 PCEFFTAGLWDCGPHDD-LIEMLNLAIMCTGESLSSRPSMRQVA 1071 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~-~~~l~~li~~cl~~~p~~RPt~~ev~ 1071 (1082)
. ..|... +.++..++.+|+..+|.+|+++.||.
T Consensus 240 ~----------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 240 F----------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred c----------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 1 122333 67899999999999999999999998
No 30
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=313.83 Aligned_cols=236 Identities=26% Similarity=0.394 Sum_probs=202.5
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccc---cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQ---GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.+|+..+.||.|+||+|.+++. .+|..+|+|++...... ..+....|..+++.+.||.++++++.+.+....|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 4688889999999999999964 46899999999876543 3455678999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||++||.|.++++. .+++++..++.+|.||+.|++|||+. +|++||+||+|||+|++|.+||+|||+|+....
T Consensus 124 eyv~GGElFS~Lrk--~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~-- 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRK--SGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG-- 196 (355)
T ss_pred eccCCccHHHHHHh--cCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC--
Confidence 99999999999998 45799999999999999999999999 999999999999999999999999999998643
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
...+.+||+.|+|||+++++.+..++|.|||||++|||+.|..||....+ .+.. ..+.++++
T Consensus 197 --rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY-~KI~~~~v------- 258 (355)
T KOG0616|consen 197 --RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIY-EKILEGKV------- 258 (355)
T ss_pred --cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHH-HHHHhCcc-------
Confidence 24567999999999999999999999999999999999999999974321 2222 22223322
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCC
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSR 1064 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~R 1064 (1082)
.+|..-..++..|+...++.|-.+|
T Consensus 259 ---~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 259 ---KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ---cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 2455556688899999999999888
No 31
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=349.80 Aligned_cols=257 Identities=26% Similarity=0.415 Sum_probs=211.7
Q ss_pred CccccceecccCceEEEEEEEcC--C--eE-EEEEEeecC---ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIP--G--VV-VAVKRLSVG---RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~--~--~~-vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
+....++||+|+||.||+|++.. + .. ||||..+.. ......+|..|++++++++|||||+++|++..+..++
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 34455899999999999996553 2 23 899998852 3466788999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+|||++.||+|.++|+..+. .++..++..++.+.|+||+|||++ +++||||.++|+|++.++.+||+|||+++.-.
T Consensus 238 ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred EEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 99999999999999998743 799999999999999999999999 99999999999999999999999999987543
Q ss_pred CCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
..........-...|+|||.+....++.++|||||||++||+++ |..||.+. ...+....+...+...
T Consensus 314 -~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~--------~~~~v~~kI~~~~~r~-- 382 (474)
T KOG0194|consen 314 -QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM--------KNYEVKAKIVKNGYRM-- 382 (474)
T ss_pred -ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCC--------CHHHHHHHHHhcCccC--
Confidence 11111111134579999999999999999999999999999998 78888643 3334333333433222
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
..+...+.++..++.+||..+|++||+|.++.+.++.+...
T Consensus 383 -------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 383 -------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred -------CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 23446677899999999999999999999999999987654
No 32
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-37 Score=342.86 Aligned_cols=247 Identities=23% Similarity=0.350 Sum_probs=212.8
Q ss_pred cCccccceecccCceEEEEEE-EcCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
+-|+..+.||.|+.|.|-.|+ ..+|+.+|||++..... .....+.+|+-+|+-+.|||++++++++++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 458899999999999999995 56799999999976521 22456889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|-|.+++-.+ ..+++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|.... .
T Consensus 92 Eyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~--~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV--P 164 (786)
T ss_pred EecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc--C
Confidence 999999999999874 5789999999999999999999999 99999999999999999999999999998643 3
Q ss_pred CccccCcccCCCcccchhcccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVS-DKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.....+.+|+++|.|||++.+..|. .++||||+|||+|.|++|+.||+ ++++...... ++.|.+
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd--------DdNir~LLlK-V~~G~f------ 229 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD--------DDNIRVLLLK-VQRGVF------ 229 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC--------CccHHHHHHH-HHcCcc------
Confidence 3345567999999999999998875 68999999999999999999998 2344443333 333322
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+.|...+.+++.|+.+|+..||++|-|+.||.++
T Consensus 230 ----~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 ----EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ----cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 2466777899999999999999999999999876
No 33
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-36 Score=335.40 Aligned_cols=246 Identities=17% Similarity=0.285 Sum_probs=203.4
Q ss_pred ceecccCceEEEEEEEcCCeEEEEEEeecCcccc---HHHHHHHHHHHhccCCCceeeEeeeecc----CCeEEEEEeec
Q 045553 807 NCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQG---VQQFAAEIRTLGRVQHPNLVTLIGYHVS----EAEMFLIYNYL 879 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lV~E~~ 879 (1082)
..||+|++|.||+|.. +|+.||||++....... .+.|.+|++++++++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 6799999999999987 58999999997654333 4678899999999999999999999876 35789999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++|+|.++++.. ..+++....+++.|++.|++|||+.. +++||||||+||++++++.+||+|||+++.+....
T Consensus 105 ~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~--- 177 (283)
T PHA02988 105 TRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP--- 177 (283)
T ss_pred CCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---
Confidence 999999999874 46889999999999999999999842 78899999999999999999999999998654322
Q ss_pred ccCcccCCCcccchhccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 960 TTDVAGTFGYVAPEYAMT--CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||... ...++.......+...
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~--------~~~~~~~~i~~~~~~~------- 241 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL--------TTKEIYDLIINKNNSL------- 241 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhcCCCC-------
Confidence 22457899999999976 68999999999999999999999999732 2233333333222111
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+...+..+.+++.+||+.||++|||+.||++.|+.++
T Consensus 242 --~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 242 --KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred --CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 122244568999999999999999999999999999875
No 34
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.2e-37 Score=334.88 Aligned_cols=253 Identities=26% Similarity=0.366 Sum_probs=204.4
Q ss_pred HhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
..++|++.+.||+|+||.||+|+ ..+|..+|+|++++... ...+.+..|-++|....+|.||+++..|.+.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 55679999999999999999995 55799999999987643 445667889999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||++||++..+|.. ...++++.+..++.+++-|+..+|+. |+|||||||+|+|||..|++|++|||++.-+..
T Consensus 219 iMEylPGGD~mTLL~~--~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR--KDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHHh--cCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhh
Confidence 9999999999999987 45799999999999999999999999 999999999999999999999999999853211
Q ss_pred ----------------------CC-C-----c------------------cccCcccCCCcccchhcccCCCCchhhHHH
Q 045553 955 ----------------------SE-T-----H------------------ATTDVAGTFGYVAPEYAMTCRVSDKADVYS 988 (1082)
Q Consensus 955 ----------------------~~-~-----~------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s 988 (1082)
.+ . . .....+|||.|+|||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 00 0 0 011356999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCC--
Q 045553 989 FGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS-- 1066 (1082)
Q Consensus 989 lGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt-- 1066 (1082)
+|||+|||+.|.+||....+. +....+..|..... . ........++.++|.+|+. ||++|--
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~-~T~rkI~nwr~~l~-------f-------P~~~~~s~eA~DLI~rll~-d~~~RLG~~ 437 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQ-ETYRKIVNWRETLK-------F-------PEEVDLSDEAKDLITRLLC-DPENRLGSK 437 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhhhcc-------C-------CCcCcccHHHHHHHHHHhc-CHHHhcCcc
Confidence 999999999999999754332 11112222221111 1 1112334689999999999 9999974
Q ss_pred -HHHHHH
Q 045553 1067 -MRQVAQ 1072 (1082)
Q Consensus 1067 -~~ev~~ 1072 (1082)
+.||.+
T Consensus 438 G~~EIK~ 444 (550)
T KOG0605|consen 438 GAEEIKK 444 (550)
T ss_pred cHHHHhc
Confidence 555543
No 35
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-37 Score=368.26 Aligned_cols=257 Identities=28% Similarity=0.422 Sum_probs=213.8
Q ss_pred CccccceecccCceEEEEEEEcC--C----eEEEEEEeecC-ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIP--G----VVVAVKRLSVG-RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~--~----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
..+..+.||+|.||.||.|...+ | ..||||.+... +.++..+|.+|..+|+.++|||||+++|++.+....++
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 34566789999999999996543 3 34899988654 45667889999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 875 IYNYLPGGNLEKFIQDRP-----RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
++|||++|+|..|+++.+ ...++....+.++.|||+|+.||+++ ++|||||..+|+|+++...|||+|||+|
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchh
Confidence 999999999999999753 45688999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccCc-ccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 950 RLLGTSETHATTDV-AGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
+.+...+.+..... .-...|||||.+..+.++.|+|||||||++||++| |..||.. .+-.+.+..+..++
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~--------~~n~~v~~~~~~gg 921 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPS--------RSNFEVLLDVLEGG 921 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCC--------cchHHHHHHHHhCC
Confidence 95544443333222 33468999999999999999999999999999998 5555542 12233444444444
Q ss_pred CCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1028 RPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
+-+.|..++..+.++|..||+.+|++||++..|++.+..+.+
T Consensus 922 ----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 922 ----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred ----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 224577889999999999999999999999999998887653
No 36
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-37 Score=303.56 Aligned_cols=249 Identities=25% Similarity=0.353 Sum_probs=213.3
Q ss_pred hcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.+.||+|-||.||.|+ .+++..||+|++.+.. ....+++.+|+++-+.++||||++++++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 3568999999999999999995 5568899999986543 24457889999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
+||..+|++...+++.+...+++.....+..|+|.|+.|+|.. +|+||||||+|+|++.++..||+|||.+....
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 9999999999999988788899999999999999999999999 99999999999999999999999999997643
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.....+.+||..|.+||+..+..++...|+|++|++.||++.|.+||..... .+..+.+.. .+.
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--------~etYkrI~k----~~~--- 239 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--------SETYKRIRK----VDL--- 239 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--------HHHHHHHHH----ccc---
Confidence 3345668999999999999999999999999999999999999999974221 111111111 011
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..|...+..+.++|.+|+..+|.+|.+..||+++
T Consensus 240 ----~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 240 ----KFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ----cCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 2344556789999999999999999999999875
No 37
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-37 Score=304.44 Aligned_cols=261 Identities=22% Similarity=0.344 Sum_probs=214.5
Q ss_pred hcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccC-----CeEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE-----AEMF 873 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~ 873 (1082)
.++|++.+.+|+|||+-||.++ ..+++.+|+|++.....++.+...+|++..++++|||+++++++...+ .+.|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4579999999999999999995 677899999999988888889999999999999999999999987643 3589
Q ss_pred EEEeecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 874 LIYNYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
++++|...|+|.+.+.... +..+++.+++.|+.++++||++||+. .|+++||||||.||++.+++.+++.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 9999999999999998643 55799999999999999999999998 34699999999999999999999999999976
Q ss_pred cCCCCCc--------cccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHH
Q 045553 952 LGTSETH--------ATTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWA 1020 (1082)
Q Consensus 952 ~~~~~~~--------~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~ 1020 (1082)
..-.-.. ....-..|..|+|||.+. +...++++|||||||++|+|+.|..||+.....
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~----------- 247 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ----------- 247 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc-----------
Confidence 5321111 111234788999999885 567899999999999999999999999854432
Q ss_pred HHHHhcCCCc--cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1021 SMLLLQGRPC--EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1021 ~~~~~~~~~~--~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
|... .+....+.-+-....++.+.+++.+|++.||.+||++.+++..+..+.
T Consensus 248 ------GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 248 ------GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ------CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 2111 111112211122346789999999999999999999999999988764
No 38
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-37 Score=321.32 Aligned_cols=248 Identities=23% Similarity=0.383 Sum_probs=212.9
Q ss_pred hcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
..+|++.+.||+|.||.|-+|. ...|+.||||.++.... ++.-.+.+|+++|+.++||||+.++.+|+..+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 3468899999999999999994 57799999999976544 4455688999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||..+|.|++|+..+ +.+++.+++.+++||.+|+.|+|.+ +++|||+|.+|||+|.++++||+|||++-.+...
T Consensus 132 MEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 132 MEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 9999999999999984 5799999999999999999999999 9999999999999999999999999999887533
Q ss_pred CCccccCcccCCCcccchhcccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVS-DKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
...++++|++-|.+||...+..|. +..|-||+||++|-++.|..||+. .+....++++. .|.+.+
T Consensus 207 --kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG--------~Dhk~lvrQIs-~GaYrE--- 272 (668)
T KOG0611|consen 207 --KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG--------RDHKRLVRQIS-RGAYRE--- 272 (668)
T ss_pred --cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC--------chHHHHHHHhh-cccccC---
Confidence 345678999999999999998874 689999999999999999999983 34444444432 222211
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
+..+....-+|++|+..+|++|.|+.+|..+.
T Consensus 273 --------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 273 --------PETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred --------CCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 23345677899999999999999999998764
No 39
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=331.29 Aligned_cols=260 Identities=25% Similarity=0.382 Sum_probs=214.1
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccc-cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ-GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
....+.++||+|-||+|..++...+..||||+++..... ...+|.+|+++|.+++||||++++|+|..++.+++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 345678999999999999999887899999999876544 4588999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc-
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH- 958 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~- 958 (1082)
++|+|.+|+..+......-....+|+.|||.||+||.+. .+||||+.++|+|+|.++++||+|||+++-+-..+.+
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 999999999987444445566778999999999999999 9999999999999999999999999999966544444
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHH--hCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELI--SDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ell--tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.....+-..+|||||.+..++++.++|||+||+.+||++ +...||.... -.+.++. ..++++..
T Consensus 695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt--------~e~vven------~~~~~~~~ 760 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT--------DEQVVEN------AGEFFRDQ 760 (807)
T ss_pred eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh--------HHHHHHh------hhhhcCCC
Confidence 333455678999999999999999999999999999975 4667775321 1122221 12222222
Q ss_pred cC---CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1037 LW---DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1037 l~---~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
-. ...|.-++.++.+++.+||..+.++||+++++...|.+.
T Consensus 761 ~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 761 GRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11 124567788999999999999999999999999988764
No 40
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.8e-36 Score=333.11 Aligned_cols=255 Identities=21% Similarity=0.334 Sum_probs=207.2
Q ss_pred cCccccceecccCceEEEEEEEc----CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII----PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.+|++.+.||+|+||.||+|.+. .+..||+|.++.... .....|.+|+..+++++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46889999999999999999653 357899999876532 3345788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++|+|.+++... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.++++|||.+......
T Consensus 85 ~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 85 TEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred EEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 9999999999999865 34689999999999999999999999 9999999999999999999999999987654322
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
.........++..|+|||++.+..++.++|||||||++||+++ |+.||.... ..+..... .++...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~--------~~~~~~~~-~~~~~~---- 227 (266)
T cd05064 161 AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS--------GQDVIKAV-EDGFRL---- 227 (266)
T ss_pred chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC--------HHHHHHHH-HCCCCC----
Confidence 2222222345678999999999999999999999999999775 999986321 12222222 222111
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
..+...+..+.+++.+||+.+|++||++.||.+.|+++
T Consensus 228 -----~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 -----PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 12334566899999999999999999999999999765
No 41
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.4e-36 Score=331.28 Aligned_cols=256 Identities=25% Similarity=0.397 Sum_probs=211.8
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|++.++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.+....++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 35688999999999999999988888899999986543 33578899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.++++......+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||+++.........
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 999999999876566789999999999999999999999 99999999999999999999999999998765433222
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||+..+..++.++|||||||++|||++ |+.||.... ..+.... ...+...
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--------~~~~~~~-~~~~~~~-------- 223 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS--------NSDVMSA-LQRGYRM-------- 223 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC--------HHHHHHH-HHcCCCC--------
Confidence 233446778999999998889999999999999999998 888885321 1111122 1222111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
......+.++.+++.+|++.+|++||++.++.+.|+++
T Consensus 224 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 -PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred -CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 11123346789999999999999999999999999864
No 42
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1e-41 Score=355.82 Aligned_cols=473 Identities=27% Similarity=0.377 Sum_probs=360.1
Q ss_pred ccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCC
Q 045553 102 LSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQS 181 (1082)
Q Consensus 102 l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 181 (1082)
+.+.+.+|..|.+|++.+|++. .+|.+++.+..++.|+.++|+++ ++|++++.+.+|+.|+.++|.+. .+|+.++.+
T Consensus 60 l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~ 136 (565)
T KOG0472|consen 60 LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRL 136 (565)
T ss_pred ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHH
Confidence 4566899999999999999999 89999999999999999999999 99999999999999999999999 788899999
Q ss_pred CCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEe
Q 045553 182 PGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLD 261 (1082)
Q Consensus 182 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 261 (1082)
-.|+.|+..+|+++ ++|+.++ ++.+|..|++.+|+++.. |+..-+++.|++||+.+|.++ .+|..++.+.+|+.|+
T Consensus 137 ~~l~dl~~~~N~i~-slp~~~~-~~~~l~~l~~~~n~l~~l-~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~Ly 212 (565)
T KOG0472|consen 137 LDLEDLDATNNQIS-SLPEDMV-NLSKLSKLDLEGNKLKAL-PENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLY 212 (565)
T ss_pred hhhhhhhccccccc-cCchHHH-HHHHHHHhhccccchhhC-CHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHH
Confidence 99999999999999 8898887 589999999999999954 444445999999999999998 7999999999999999
Q ss_pred CCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCcccc-CCCCCcEEEcCCCcc
Q 045553 262 LSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSIT-RLPNLRVFWAPNLNL 340 (1082)
Q Consensus 262 Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~-~l~~L~~L~l~~n~l 340 (1082)
|.+|+|. .+| .|..+..|++|+++.|++.. +|.+.. ++++|..|++.+|++
T Consensus 213 L~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~--------------------------lpae~~~~L~~l~vLDLRdNkl 264 (565)
T KOG0472|consen 213 LRRNKIR-FLP-EFPGCSLLKELHVGENQIEM--------------------------LPAEHLKHLNSLLVLDLRDNKL 264 (565)
T ss_pred hhhcccc-cCC-CCCccHHHHHHHhcccHHHh--------------------------hHHHHhcccccceeeecccccc
Confidence 9999998 677 89999999999999877653 445544 899999999999999
Q ss_pred cCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcc------cCcccEEEecCCcceec
Q 045553 341 EGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVS------VPCMAVFNVSQNLLSGE 414 (1082)
Q Consensus 341 ~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------l~~L~~L~l~~N~l~~~ 414 (1082)
.. .|+.+..+.+|++||+|+|.|+ .+|.+++++ .|+.|-+.||++...-.+.+. +..|+. .+..-.++..
T Consensus 265 ke-~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs-~~~~dglS~s 340 (565)
T KOG0472|consen 265 KE-VPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRS-KIKDDGLSQS 340 (565)
T ss_pred cc-CchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHH-hhccCCCCCC
Confidence 87 4788888999999999999999 789999999 899999999999754333322 222222 0001111100
Q ss_pred CCCCCCccccccc-ccccccce-eeeeecccccccccccCcCC--CCCCCCCceeEeeccCCcccCCCCCccccCCCccc
Q 045553 415 IPRISHSECSKMS-VNWSMSQV-DLIGFYTAFFYENALTSCAP--FSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSS 490 (1082)
Q Consensus 415 ~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~ 490 (1082)
+- ..-+.++ .+|+..+. ..+.-.++...+.+++.++. +..-...++...+++.|++
T Consensus 341 --e~--~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL---------------- 400 (565)
T KOG0472|consen 341 --EG--GTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQL---------------- 400 (565)
T ss_pred --cc--cccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchH----------------
Confidence 00 0000000 01110000 00000111111111111111 1111222333344444443
Q ss_pred cccceeeeccCCCccccCCcccccccCCceeEE-EccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCC
Q 045553 491 RPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIF-DIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSL 569 (1082)
Q Consensus 491 ~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l-~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L 569 (1082)
.++|..+..+.++++. ++++|.+ +-+|..+. .+++|..|+|++|-+. .+|..++.+..|
T Consensus 401 -----------------~elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~-~l~kLt~L~L~NN~Ln-~LP~e~~~lv~L 460 (565)
T KOG0472|consen 401 -----------------CELPKRLVELKELVTDLVLSNNKI-SFVPLELS-QLQKLTFLDLSNNLLN-DLPEEMGSLVRL 460 (565)
T ss_pred -----------------hhhhhhhHHHHHHHHHHHhhcCcc-ccchHHHH-hhhcceeeecccchhh-hcchhhhhhhhh
Confidence 3555555555554444 4455544 35555554 5577999999999888 557888889899
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCc
Q 045553 570 RNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHN 649 (1082)
Q Consensus 570 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 649 (1082)
++||++.|++. .+|..+..+..|+.+-.++|++..+.|..+.+|.+|.+|||.+|.|. .+|+.++++++|++|+|++|
T Consensus 461 q~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gN 538 (565)
T KOG0472|consen 461 QTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGN 538 (565)
T ss_pred heecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCC
Confidence 99999999999 88999888888998888999999777777999999999999999999 88999999999999999999
Q ss_pred ccCCCCC
Q 045553 650 NLTGRIP 656 (1082)
Q Consensus 650 ~l~~~~p 656 (1082)
+|+ .++
T Consensus 539 pfr-~Pr 544 (565)
T KOG0472|consen 539 PFR-QPR 544 (565)
T ss_pred ccC-CCH
Confidence 999 444
No 43
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=351.70 Aligned_cols=258 Identities=24% Similarity=0.325 Sum_probs=216.5
Q ss_pred cCccccceecccCceEEEEEEEcCC-eEEEEEEeecCccccHHHHHHHHHHHhccC-CCceeeEeeeec-c------CCe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPG-VVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHV-S------EAE 871 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~-~------~~~ 871 (1082)
.+++|.++|.+|||+.||.|....+ ..||+|++...+..+.+.+.+|+++|+.++ |+|||.+++... . ..+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 4577889999999999999977666 999999998888888899999999999997 999999999322 1 257
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
++|.||||++|+|-+++..+....+++.++++|+.|+++|+++||.. .|+|||||||-+|||++.++..||||||.|.-
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 89999999999999999987777799999999999999999999996 67899999999999999999999999999874
Q ss_pred cCCCC-Cc-------cccCcccCCCcccchhc---ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHH
Q 045553 952 LGTSE-TH-------ATTDVAGTFGYVAPEYA---MTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWA 1020 (1082)
Q Consensus 952 ~~~~~-~~-------~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~ 1020 (1082)
.-... .. ..-....|+-|+|||++ .+..+++|+|||||||+||-|+.+..||+..-
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg------------- 262 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG------------- 262 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc-------------
Confidence 32211 11 01123478999999987 46789999999999999999999999997431
Q ss_pred HHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1021 SMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1021 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
...++.....-.....+...+..||+.|++++|++||++-+|...+.+++..
T Consensus 263 --------~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 263 --------KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred --------ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 1233333333333357889999999999999999999999999999887654
No 44
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=331.31 Aligned_cols=249 Identities=25% Similarity=0.390 Sum_probs=209.5
Q ss_pred cCccccceecccCceEEEEE-EEcCCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..|...+.||+|.||.||+| ...+++.||+|++..... .+.+.+++|+.++.+.+++||.++++.+..+...+++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 45777789999999999999 455789999999987643 4567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+.||++.+.++.. ..+.+..+.-|++++..|+.|+|.+ +.+|||||+.||++..+|.+|++|||.+..+......
T Consensus 93 ~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred hcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhc
Confidence 9999999999874 3458888889999999999999999 9999999999999999999999999999887655444
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
. .+++||+.|||||++....|+.|+||||||++.+||.+|.+|+....+- .++-. +.+. .-|.+.
T Consensus 168 r-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm--------rvlfl-Ipk~-----~PP~L~ 232 (467)
T KOG0201|consen 168 R-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM--------RVLFL-IPKS-----APPRLD 232 (467)
T ss_pred c-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc--------eEEEe-ccCC-----CCCccc
Confidence 4 6789999999999999889999999999999999999999998754321 00000 0001 011111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
......+++++..|++.+|+.||++.+++++
T Consensus 233 ----~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 233 ----GDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ----cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 2456679999999999999999999999864
No 45
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=7.7e-36 Score=326.14 Aligned_cols=252 Identities=22% Similarity=0.406 Sum_probs=207.1
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
.+|++.+.||+|+||.||+|++.++..+|+|.+.... ...+++.+|++++++++||||+++++++......++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 3578889999999999999998888899999886443 335678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+|+|.++++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++..........
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence 999999998643 3589999999999999999999999 999999999999999999999999999986543333222
Q ss_pred cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 961 TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+...........
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~--------~~~~~~~~i~~~~~~---------- 220 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK--------SNYEVVEMISRGFRL---------- 220 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCC--------CHHHHHHHHHCCCCC----------
Confidence 33345678999999998889999999999999999999 88888632 122222332222111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
..+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 221 ~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 221 YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 012223457899999999999999999999999873
No 46
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=314.55 Aligned_cols=265 Identities=25% Similarity=0.342 Sum_probs=202.1
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhc--cCCCceeeEeeeeccC----CeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGR--VQHPNLVTLIGYHVSE----AEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~~~~l 874 (1082)
.+..+.+.||+|.||.||+|+|. |+.||||++...+ .+.+.+|.++.+. ++|+||+.+++.-..+ .+.||
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 34678899999999999999998 9999999997543 3456666666654 5999999999976543 46899
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDE-----CVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
|.+|.+.|||++||.. ..++-+...+++..+|.||+|||.. .+|.|.|||||++|||+.+++.+.|+|+|+|
T Consensus 287 vTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA 363 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 363 (513)
T ss_pred eeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence 9999999999999986 4789999999999999999999954 4689999999999999999999999999999
Q ss_pred eecCCCCCc---cccCcccCCCcccchhcccCC------CCchhhHHHHHHHHHHHHhC----------CCCCCCCccCC
Q 045553 950 RLLGTSETH---ATTDVAGTFGYVAPEYAMTCR------VSDKADVYSFGVVLLELISD----------KKALDPSFCSF 1010 (1082)
Q Consensus 950 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~slGvll~elltg----------~~p~~~~~~~~ 1010 (1082)
......... .....+||.+|||||++...- .-..+||||||.|+||+.-+ +.||++.-+.
T Consensus 364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~- 442 (513)
T KOG2052|consen 364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS- 442 (513)
T ss_pred EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC-
Confidence 877544321 334578999999999986421 12368999999999998642 3555533222
Q ss_pred CCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1011 GNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
+.++.+ ++.++--.+....+.++. ...+....+.++|+.||..+|..|-|+--|.+.|.++.+
T Consensus 443 --DPs~ee-MrkVVCv~~~RP~ipnrW---~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 443 --DPSFEE-MRKVVCVQKLRPNIPNRW---KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred --CCCHHH-HhcceeecccCCCCCccc---ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 122222 111111111111111111 234677889999999999999999999999999988763
No 47
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.6e-36 Score=329.33 Aligned_cols=255 Identities=26% Similarity=0.426 Sum_probs=210.8
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.+|.+.+.||+|+||.||+|... .++.||+|++... ....+++.+|++.+++++|||++++++++..+...++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 35788899999999999999654 5889999998754 334567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++.......+++..+..++.|+++|++|||+. +++||||||+||++++++.+||+|||++..........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~ 161 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 161 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence 999999999876566789999999999999999999999 99999999999999999999999999998765433322
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||++.+..++.++|||||||++|||++ |..||... ...++.... ..+. .
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~--------~~~~~~~~~-~~~~---------~ 223 (263)
T cd05052 162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQVYELL-EKGY---------R 223 (263)
T ss_pred cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--------CHHHHHHHH-HCCC---------C
Confidence 223345678999999999999999999999999999998 88887532 122222222 1111 1
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
...+...+.++.+++.+|++.+|++||++.++.++|+.+
T Consensus 224 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 224 MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 112334456899999999999999999999999999875
No 48
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.1e-36 Score=328.58 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=211.6
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|++.+.||+|++|.||+|...+++.||+|.++... ...+++.+|++++++++|||++++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 35688999999999999999987778899999987543 34567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++.......+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||+++.........
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA 160 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence 999999999876556789999999999999999999999 99999999999999999999999999998775332222
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
......+..|+|||+..+..++.++||||||+++|||++ |+.||.... ..+..... .....
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~~-~~~~~--------- 222 (261)
T cd05068 161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT--------NAEVLQQV-DQGYR--------- 222 (261)
T ss_pred cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHH-HcCCC---------
Confidence 222334568999999999999999999999999999999 888886321 11111111 11111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
...+...+..+.+++.+|++.+|++||++.++++.|+++
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 012234456899999999999999999999999999863
No 49
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.6e-36 Score=328.99 Aligned_cols=249 Identities=32% Similarity=0.552 Sum_probs=200.0
Q ss_pred ccceecccCceEEEEEEEc-----CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 805 VQNCIGSGGFGATYKAEII-----PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+.+.||.|.||.||+|.+. .+..|+||.++.... ...+.|.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4578999999999999877 368899999965432 3478899999999999999999999999988889999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC-
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET- 957 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~- 957 (1082)
+++|+|.++++......+++..+..|+.|+++||+|||+. +++||||+++||++++++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 9999999999987567899999999999999999999999 999999999999999999999999999987732222
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.......+...|+|||.+.+..++.++||||||+++||+++ |+.||... ...++.... .++...
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--------~~~~~~~~~-~~~~~~------ 224 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--------DNEEIIEKL-KQGQRL------ 224 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--------CHHHHHHHH-HTTEET------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccc-cccccc------
Confidence 22333457789999999999999999999999999999999 67777522 333444443 332221
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
..+...+..+.+++.+||+.+|++||+|.+|++.|
T Consensus 225 ---~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 ---PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 12234456899999999999999999999999886
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=7.7e-36 Score=331.41 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=204.6
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.|++.+.||+|+||.||+|.. .+|+.||+|.+..... .....+.+|++++++++|++++++.+++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 377889999999999999964 5789999999865422 233457889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++|+|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 99999999888765455789999999999999999999999 99999999999999999999999999998754322
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
......|+..|+|||++.+..++.++||||+||++|||++|+.||...... ....-+.......
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~---------- 220 (285)
T cd05631 157 -TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER-----VKREEVDRRVKED---------- 220 (285)
T ss_pred -eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc-----hhHHHHHHHhhcc----------
Confidence 223457899999999999999999999999999999999999999743211 1111111111111
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPS-----MRQVAQQ 1073 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~~ 1073 (1082)
....+...+..+.+++.+|++.+|++||+ +.|+.++
T Consensus 221 ~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 221 QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 01123344568899999999999999997 7888764
No 51
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.3e-35 Score=333.10 Aligned_cols=262 Identities=23% Similarity=0.411 Sum_probs=205.5
Q ss_pred cCccccceecccCceEEEEEEEcC-----------------CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIP-----------------GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTL 862 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l 862 (1082)
++|++.++||+|+||.||+|.+.+ +..||+|.+.... .....+|.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578899999999999999996532 3479999987543 2345678999999999999999999
Q ss_pred eeeeccCCeEEEEEeecCCCCHHHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEe
Q 045553 863 IGYHVSEAEMFLIYNYLPGGNLEKFIQDRP-----------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLH 925 (1082)
Q Consensus 863 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 925 (1082)
++++.+.+..++||||+++|+|.+++.... ...+++..+.+++.|++.||+|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 999999999999999999999999986532 13478889999999999999999999 9999
Q ss_pred ccCCCCCEEEcCCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh--CCCC
Q 045553 926 RDIKPSNILLDNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS--DKKA 1002 (1082)
Q Consensus 926 ~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt--g~~p 1002 (1082)
|||||+||+++.++.+||+|||+++........ ......++..|+|||++.++.++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999866433322 2223456789999999998899999999999999999987 4456
Q ss_pred CCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1003 LDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1003 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
|.... .......+............ ...+...+..+.+++.+||+.+|++||++.||.+.|++
T Consensus 242 ~~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELT-----DEQVIENAGEFFRDQGRQVY------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCC-----HHHHHHHHHHHhhhcccccc------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 64321 12222322222222111110 01123445689999999999999999999999998864
No 52
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8.7e-36 Score=343.37 Aligned_cols=258 Identities=23% Similarity=0.397 Sum_probs=206.0
Q ss_pred hcCccccceecccCceEEEEEEE------cCCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI------IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 871 (1082)
.++|++.+.||+|+||.||+|.+ .++..||||+++... ....+.+.+|+++++.+ +||||+++++++.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 34689999999999999999963 235689999986443 23456788999999999 89999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCC-----------------------------------------------------------
Q 045553 872 MFLIYNYLPGGNLEKFIQDRP----------------------------------------------------------- 892 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------- 892 (1082)
.++||||+++|+|.++++...
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999997532
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 893 --------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 893 --------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
...+++..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 12478899999999999999999999 9999999999999999999999999999876433222
Q ss_pred c-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 959 A-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 959 ~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
. .....++..|+|||++.+..++.++|||||||++|||++ |..||..... .....+ .+..+...
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~----~~~~~~----~~~~~~~~------ 336 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV----DSKFYK----MIKEGYRM------ 336 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc----hHHHHH----HHHhCccC------
Confidence 1 122345678999999999999999999999999999998 8888863211 111111 22222111
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
..+...+.++.+++.+|++.+|++||+|.||+++|++.
T Consensus 337 ---~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 ---LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ---CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 11222345799999999999999999999999999864
No 53
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3e-36 Score=330.48 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=215.6
Q ss_pred HhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
...+|++.++||.|+||.||+|...++..+|+|.+.........++.+|+++++.++|+|++++++++......++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 34568899999999999999998888999999999876665677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.++++......+++..+.+++.|++.|++|||+. +|+||||+|+||+++.++.+||+|||.+.........
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 9999999999876667789999999999999999999999 9999999999999999999999999999876432222
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
.....++..|+|||+..+..++.++||||||+++|+|++ |+.||.... ..+.........
T Consensus 161 -~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~~~~---------- 221 (261)
T cd05148 161 -SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--------NHEVYDQITAGY---------- 221 (261)
T ss_pred -ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHHHhCC----------
Confidence 223446778999999998899999999999999999998 888886321 122222222111
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
....+...+..+.+++.+|++.+|++||++.++++.|+.+
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 222 RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 1112234456889999999999999999999999999864
No 54
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=339.62 Aligned_cols=242 Identities=23% Similarity=0.327 Sum_probs=204.5
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 874 (1082)
..+|.+.++||+|.||+|++|+.+ +++.+|||++++.. .++.+..+.|.+++... +||.++.++.++.+.++.|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 457999999999999999999654 58899999998764 35567777888887766 59999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+.||++..+.+ ...+++..+.-+|..++.||+|||++ +|||||||.+|||+|.+|.+||+|||+++.--
T Consensus 447 vmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m- 519 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM- 519 (694)
T ss_pred EEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC-
Confidence 999999999555444 45799999999999999999999999 99999999999999999999999999998642
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
.....+.+++||+.|+|||++.+..|+.+.|.|||||++|||+.|..||.++.. .+....++.++
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE--------ee~FdsI~~d~------- 584 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE--------EEVFDSIVNDE------- 584 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHhcCC-------
Confidence 223356779999999999999999999999999999999999999999974321 12222222111
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSM 1067 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 1067 (1082)
-.||...+.+...|+++++..+|++|--+
T Consensus 585 ----~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 ----VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ----CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 13677888999999999999999999865
No 55
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.3e-36 Score=345.52 Aligned_cols=259 Identities=24% Similarity=0.411 Sum_probs=206.2
Q ss_pred hcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 871 (1082)
.++|++.+.||+|+||.||+|... ++..||||++.... ....+.+.+|+++++.+ +|+||+++++++...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 457899999999999999998632 23579999997543 23356688999999999 89999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCC-----------------------------------------------------------
Q 045553 872 MFLIYNYLPGGNLEKFIQDRP----------------------------------------------------------- 892 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------- 892 (1082)
.++||||+++|+|.++++...
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 999999999999999986421
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc-cccC
Q 045553 893 ---------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH-ATTD 962 (1082)
Q Consensus 893 ---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~ 962 (1082)
...+++.++.+++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++........ ....
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 12478899999999999999999999 9999999999999999999999999999865433221 1122
Q ss_pred cccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 963 VAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 963 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
..++..|+|||++.+..++.++|||||||++|||++ |+.||...... . .. ......+. ....
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~----~---~~-~~~~~~~~---------~~~~ 336 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN----S---KF-YKMVKRGY---------QMSR 336 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc----H---HH-HHHHHccc---------CccC
Confidence 345678999999999999999999999999999997 99998643211 1 11 11111111 0011
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
+...+.++.+++.+||+.+|++||++.+|+++|+++.
T Consensus 337 ~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 337 PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 2223468999999999999999999999999999864
No 56
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=339.46 Aligned_cols=295 Identities=22% Similarity=0.187 Sum_probs=237.0
Q ss_pred cCCCCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCccc
Q 045553 91 NSNSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQF 170 (1082)
Q Consensus 91 ~~~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 170 (1082)
.+.+.|+++..-+..|.++++|+.++|..|.++ .+|...+...+|+.|+|.+|.|+..-.+++..++.|+.||||.|.|
T Consensus 83 LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~i 161 (873)
T KOG4194|consen 83 LDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLI 161 (873)
T ss_pred eeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchh
Confidence 456778999988999999999999999999999 8998777888999999999999988888999999999999999999
Q ss_pred ccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCcc
Q 045553 171 NGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSS 250 (1082)
Q Consensus 171 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 250 (1082)
+...-..|..-.++++|+|++|+|+ .+...-+.++.+|..|.|+.|+|+...+..|.++++|+.|+|..|+|.-..--.
T Consensus 162 s~i~~~sfp~~~ni~~L~La~N~It-~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~lt 240 (873)
T KOG4194|consen 162 SEIPKPSFPAKVNIKKLNLASNRIT-TLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLT 240 (873)
T ss_pred hcccCCCCCCCCCceEEeecccccc-ccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhh
Confidence 9655578888899999999999999 676666678999999999999999666678888999999999999998544678
Q ss_pred ccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCC
Q 045553 251 FGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNL 330 (1082)
Q Consensus 251 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L 330 (1082)
|.+|++|+.|.|..|.|...-..+|..+.++++|+|..|.+. ..--.++.+|+.|
T Consensus 241 FqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~-------------------------~vn~g~lfgLt~L 295 (873)
T KOG4194|consen 241 FQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ-------------------------AVNEGWLFGLTSL 295 (873)
T ss_pred hcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh-------------------------hhhcccccccchh
Confidence 999999999999999999887888888888888888765433 2233566677777
Q ss_pred cEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-ccCcccEEEecCC
Q 045553 331 RVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SVPCMAVFNVSQN 409 (1082)
Q Consensus 331 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l~~L~~L~l~~N 409 (1082)
+.|++++|.|..+.++.|+.+++|++|+|++|+|+...+.+|..+.+|++|+|++|.|+......+ .+.+|+.|||++|
T Consensus 296 ~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N 375 (873)
T KOG4194|consen 296 EQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSN 375 (873)
T ss_pred hhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCC
Confidence 777777777777777777777777777777777776666666667777777777777665444333 3445555555555
Q ss_pred cce
Q 045553 410 LLS 412 (1082)
Q Consensus 410 ~l~ 412 (1082)
.|+
T Consensus 376 ~ls 378 (873)
T KOG4194|consen 376 ELS 378 (873)
T ss_pred eEE
Confidence 444
No 57
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.2e-36 Score=332.17 Aligned_cols=245 Identities=23% Similarity=0.330 Sum_probs=203.5
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36889999999999999999654 689999999865422 33456889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 999999999999864 4689999999999999999999999 9999999999999999999999999999865322
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||... ............ ..
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~--------~~~~~~~~i~~~-~~------- 215 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD--------NPFGIYEKILAG-KL------- 215 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhC-Cc-------
Confidence 22346899999999999999999999999999999999999999632 122222222221 11
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPS-----MRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~~ 1073 (1082)
..+......+.+++.+|++.||.+||+ +.|++++
T Consensus 216 ---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 ---EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ---CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 122233457899999999999999995 7887754
No 58
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-35 Score=324.27 Aligned_cols=252 Identities=23% Similarity=0.399 Sum_probs=206.8
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
.+|++.+.||+|+||.||+|+..++..||+|.+.... ...+++.+|+.++++++||||+++++++......++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 3578889999999999999988777789999987543 335678999999999999999999999999889999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+++|.+++.... ..+++..++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.++..........
T Consensus 83 ~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 83 NGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence 999999998753 3689999999999999999999999 999999999999999999999999999986644332222
Q ss_pred cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 961 TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....++..|+|||+..+..++.++||||||+++|||++ |+.||.... ......... .+...
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~-~~~~~--------- 220 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN--------NSETVEKVS-QGLRL--------- 220 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC--------HHHHHHHHh-cCCCC---------
Confidence 23345678999999998889999999999999999998 998886321 112222222 22111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
..+...+..+.+++.+||+.+|++||++.+|++.|+
T Consensus 221 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 112223568999999999999999999999998874
No 59
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2e-35 Score=323.77 Aligned_cols=253 Identities=27% Similarity=0.455 Sum_probs=208.5
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
++|++.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+|++++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 46889999999999999999888888999999875443 3567899999999999999999999875 456899999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+++|.++++......+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||.+..+........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcccccc
Confidence 99999999876556789999999999999999999999 999999999999999999999999999987654333222
Q ss_pred cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 961 TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....++..|+|||+..+..++.++||||||+++|||++ |+.||... ...+...... .+.. .
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~--------~~~~~~~~~~-~~~~---------~ 222 (260)
T cd05070 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM--------NNREVLEQVE-RGYR---------M 222 (260)
T ss_pred cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC--------CHHHHHHHHH-cCCC---------C
Confidence 33345678999999998899999999999999999999 88888632 1122222221 1111 1
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
..+...+..+.+++.+|++.+|++|||+.++.+.|++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1223445689999999999999999999999999875
No 60
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=331.50 Aligned_cols=261 Identities=26% Similarity=0.431 Sum_probs=224.0
Q ss_pred HHhcCccccceecccCceEEEEEEEcC-CeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEIIP-GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
....+....++||-|.||.||.|.|+. .-.||||.++.+ ....++|..|..+|+.++|||+|+++|+|..+...|||.
T Consensus 264 meRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 264 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred ccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEE
Confidence 333456677999999999999999875 567999998755 355789999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
|||..|+|.+|++...+..++.--.+.+|.||+.||.||..+ .+|||||..+|+|+.++..+||+|||+++++..+.
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT 419 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT 419 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCCc
Confidence 999999999999998888888888999999999999999999 99999999999999999999999999999987655
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
........-...|.|||-+....++.|+|||+|||++||+.| |..||. +.++.++... ++.
T Consensus 420 YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYP--------GidlSqVY~L----------LEk 481 (1157)
T KOG4278|consen 420 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYP--------GIDLSQVYGL----------LEK 481 (1157)
T ss_pred eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCC--------CccHHHHHHH----------Hhc
Confidence 555555556778999999999999999999999999999988 556664 3444443322 233
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
..+-+.|+.++..+.+||+.||+++|.+||+++|+-+.++.+-..
T Consensus 482 gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 482 GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 334456778889999999999999999999999999999876543
No 61
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.8e-35 Score=328.43 Aligned_cols=256 Identities=26% Similarity=0.443 Sum_probs=208.9
Q ss_pred cCccccceecccCceEEEEEEEcC------CeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIP------GVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
.+|++.+.||+|+||.||+|.... ...||+|.+..... .....|.+|++.+++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468889999999999999996542 26799999865432 33567899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC
Q 045553 874 LIYNYLPGGNLEKFIQDRPR--------------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL 939 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 939 (1082)
++|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999999976421 4688999999999999999999999 999999999999999999
Q ss_pred cEEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHH
Q 045553 940 NAYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIV 1017 (1082)
Q Consensus 940 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~ 1017 (1082)
.++|+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||.... ..
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~--------~~ 233 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS--------NQ 233 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC--------HH
Confidence 999999999986543322 22233456789999999998899999999999999999998 999986421 11
Q ss_pred HHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1018 AWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1018 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
+.... +..+... ..+...+.++.+++.+||+.+|++||+++||+++|+.+
T Consensus 234 ~~~~~-i~~~~~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 234 EVIEM-IRSRQLL---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHH-HHcCCcC---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 22222 2222111 12345567899999999999999999999999999863
No 62
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.3e-35 Score=337.40 Aligned_cols=260 Identities=22% Similarity=0.371 Sum_probs=208.9
Q ss_pred hcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccC-CCceeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 871 (1082)
..+|.+.++||+|+||.||+|+.. .+..||||++..... ...+.+.+|+++++++. ||||+++++++.+...
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 457889999999999999999642 235799999965433 33467899999999996 9999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCC-----------------------------------------------------------
Q 045553 872 MFLIYNYLPGGNLEKFIQDRP----------------------------------------------------------- 892 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------- 892 (1082)
.++||||+++|+|.++++...
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999987531
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC
Q 045553 893 -----------------------------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN 937 (1082)
Q Consensus 893 -----------------------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 937 (1082)
...+++..+..++.|+++|++|||+. +|+||||||+||+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 12478888999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCcc
Q 045553 938 NLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFN 1015 (1082)
Q Consensus 938 ~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~ 1015 (1082)
++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~------ 346 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD------ 346 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh------
Confidence 999999999999876433221 2223456788999999999899999999999999999997 88888642111
Q ss_pred HHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1016 IVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.........+... ..+...+..+.+++.+||+.+|++||++.+|.++|+++.+
T Consensus 347 --~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 347 --STFYNKIKSGYRM---------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred --HHHHHHHhcCCCC---------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1111222222111 1223445689999999999999999999999999998765
No 63
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-35 Score=339.92 Aligned_cols=262 Identities=23% Similarity=0.257 Sum_probs=200.2
Q ss_pred hcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..+|++.+.||+|+||.||+|. ..+++.||+|+.. .+.+.+|++++++++||||+++++++......++|||+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 3579999999999999999995 4568999999753 23467899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+ +++|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 165 ~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 165 Y-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred C-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 9 57898888763 4688999999999999999999999 9999999999999999999999999999754333323
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc------
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF------ 1032 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 1032 (1082)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.......+......+........+.....
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 33456799999999999999999999999999999999999988754321111111111111110000100000
Q ss_pred --c-------------ccccCCC--CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 --F-------------TAGLWDC--GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 --~-------------d~~l~~~--~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+ .+..+.. .....+.++.+++.+|++.||++|||+.|++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0 0000000 001235678999999999999999999999853
No 64
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-35 Score=304.27 Aligned_cols=262 Identities=25% Similarity=0.337 Sum_probs=205.9
Q ss_pred HhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCcccc--HHHHHHHHHHHhccCCCceeeEeeeecc--CCeEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQG--VQQFAAEIRTLGRVQHPNLVTLIGYHVS--EAEMF 873 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 873 (1082)
..+.|+..+.|++|+||.||+|+ ..+++.||+|+++...... .-...+|+.++.+.+|||||.+..+... -+..|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 34568889999999999999995 5578999999997654211 1235799999999999999999987764 46799
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||++ .+|..+++.. .+++...++..++.|+++|++|||.. .|+|||||++|+|+...|.+||+|||+|+.++
T Consensus 154 ~VMe~~E-hDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 154 IVMEYVE-HDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eeHHHHH-hhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 9999995 5999999987 47899999999999999999999999 99999999999999999999999999999987
Q ss_pred CCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.+. ...+..+-|..|+|||.+.+ ..|+.+.||||+|||+.||+++++-|.... .+.+.-+....-|.+.+.
T Consensus 229 sp~-k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s-------E~dQl~~If~llGtPte~ 300 (419)
T KOG0663|consen 229 SPL-KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS-------EIDQLDKIFKLLGTPSEA 300 (419)
T ss_pred CCc-ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc-------hHHHHHHHHHHhCCCccc
Confidence 653 34556678999999999987 569999999999999999999998886432 222222222222322222
Q ss_pred cccccC-------------------CCCChH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLW-------------------DCGPHD-DLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~-------------------~~~~~~-~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+-+.+. ...+.. ..+.-.+++...+.+||.+|-|+.|.+++
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 222211 111111 23667889999999999999999998754
No 65
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.2e-35 Score=322.35 Aligned_cols=255 Identities=24% Similarity=0.403 Sum_probs=207.9
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|++.++||+|+||.||+|...++..||+|++..... ..+.+.+|++++++++||||+++++++.+ ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 356999999999999999999877777899999875432 34678999999999999999999998754 5679999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++|+|.++++......+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.++|+|||.++.+.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 999999999875556689999999999999999999999 99999999999999999999999999998765443322
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||+..+..++.++||||||+++|||++ |..||.... ..+.... ...+...
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~--------~~~~~~~-~~~~~~~-------- 222 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NREVLDQ-VERGYRM-------- 222 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------hHHHHHH-HhcCCCC--------
Confidence 233456778999999998899999999999999999999 777775321 1111111 1111100
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
..+...+..+.+++.+|++.+|++||++.++++.|++.
T Consensus 223 -~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 223 -PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 11234556789999999999999999999999999864
No 66
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.3e-35 Score=326.99 Aligned_cols=264 Identities=20% Similarity=0.251 Sum_probs=203.4
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36899999999999999999765 57899999987542 2334668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|++++.+..+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 9988777655433 34689999999999999999999999 999999999999999999999999999987654333
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHH-----------HHHHHHhc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVA-----------WASMLLLQ 1026 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~-----------~~~~~~~~ 1026 (1082)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||...... ..... +.......
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI----DQLFTIQKVLGPLPAEQMKLFYSN 231 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhhCCCCHHHHHhhhcc
Confidence 3334467899999999999989999999999999999999999999642110 00000 00000000
Q ss_pred CCCccccccccCC------CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1027 GRPCEFFTAGLWD------CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1027 ~~~~~~~d~~l~~------~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
........+.... ......+..+.+++.+|++.||++|||+.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 232 PRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred chhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000000 0111235679999999999999999999998863
No 67
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3e-35 Score=327.90 Aligned_cols=260 Identities=23% Similarity=0.407 Sum_probs=212.4
Q ss_pred cCccccceecccCceEEEEEEEc------CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.+|.+.+.||+|+||.||+|+.. ++..+++|.+........+.+.+|++.+++++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45788899999999999999642 356799999876665566789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc
Q 045553 875 IYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN 940 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 940 (1082)
||||+++++|.+++.... ...+++..+++++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999997642 23489999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHH
Q 045553 941 AYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVA 1018 (1082)
Q Consensus 941 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~ 1018 (1082)
++|+|||++........ .......++..|+|||++.+..++.++||||||+++|||++ |+.||.... ...
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--------~~~ 233 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS--------NTE 233 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHH
Confidence 99999999976543322 12233456788999999999999999999999999999999 999986321 111
Q ss_pred HHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCCC
Q 045553 1019 WASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPPA 1081 (1082)
Q Consensus 1019 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~~ 1081 (1082)
... ....+...+ .+...+..+.+++.+|++.+|++||++.+|+++|+++.++.
T Consensus 234 ~~~-~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 234 VIE-CITQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred HHH-HHhCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 111 122222211 12234567999999999999999999999999999986543
No 68
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.2e-35 Score=323.20 Aligned_cols=255 Identities=26% Similarity=0.435 Sum_probs=208.2
Q ss_pred cCccccceecccCceEEEEEEEcC----CeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIP----GVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
++|++.+.||+|+||.||+|.+.. ...||||.+..... .....|.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568899999999999999997642 46899999875433 3456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++.... ..+++..+.+++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++.+...
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 84 TEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999998753 3789999999999999999999999 9999999999999999999999999999877522
Q ss_pred CC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 956 ET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 956 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
.. .......++..|+|||.+.+..++.++||||||+++|||++ |..||.... ..+..... ..+...
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~-~~~~~~--- 227 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS--------NQDVIKAV-EDGYRL--- 227 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC--------HHHHHHHH-HcCCCC---
Confidence 22 12222345678999999999899999999999999999998 988885321 11222221 121111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
..+...+..+.+++.+|++.+|++||++.||+++|+++
T Consensus 228 ------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 ------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11234456789999999999999999999999999876
No 69
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.8e-35 Score=329.98 Aligned_cols=262 Identities=23% Similarity=0.355 Sum_probs=204.9
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++|++.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 57999999999999999999654 68899999987643 23356789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++... ..+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 157 (331)
T cd06649 85 MDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (331)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc---
Confidence 9999999999864 46899999999999999999999862 6999999999999999999999999999765332
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC--cc-----
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP--CE----- 1031 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----- 1031 (1082)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ..+..........+.. ..
T Consensus 158 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (331)
T cd06649 158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDA-----KELEAIFGRPVVDGEEGEPHSISPR 232 (331)
T ss_pred ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHhcccccccccCCccccCcc
Confidence 22345689999999999999999999999999999999999999963211 1111110000000000 00
Q ss_pred -----------------------ccc---cccCCC-CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1032 -----------------------FFT---AGLWDC-GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1032 -----------------------~~d---~~l~~~-~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
..+ ...... .......++.+++.+||+.||++|||+.|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 233 PRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred cccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 000 000000 0112356799999999999999999999998763
No 70
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.6e-35 Score=320.87 Aligned_cols=250 Identities=26% Similarity=0.408 Sum_probs=204.3
Q ss_pred CccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+|++.+.||+|+||.||+|.+.++..+|+|.+.... .....+.+|++++++++||||+++++++......++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 478889999999999999988777889999986433 2345788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++...........
T Consensus 84 ~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (256)
T cd05059 84 GCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159 (256)
T ss_pred CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence 99999998653 3689999999999999999999999 9999999999999999999999999999866433222222
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDC 1040 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 1040 (1082)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||+... ..+..... ..+. ...
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~-~~~~---------~~~ 221 (256)
T cd05059 160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS--------NSEVVESV-SAGY---------RLY 221 (256)
T ss_pred CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC--------HHHHHHHH-HcCC---------cCC
Confidence 2234568999999999899999999999999999999 788886321 11111111 1111 111
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1041 GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1041 ~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
.+...+.++.+++.+|++.+|++||+|.|+++.|
T Consensus 222 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 2233466899999999999999999999999986
No 71
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.8e-35 Score=334.40 Aligned_cols=242 Identities=22% Similarity=0.287 Sum_probs=199.0
Q ss_pred ceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 807 NCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999965 468999999987542 233456788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccC
Q 045553 883 NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTD 962 (1082)
Q Consensus 883 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 962 (1082)
+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATMKT 154 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcccc
Confidence 999999863 4689999999999999999999999 9999999999999999999999999998753221 122334
Q ss_pred cccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCC
Q 045553 963 VAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGP 1042 (1082)
Q Consensus 963 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 1042 (1082)
..|++.|+|||++.+..++.++||||+||++|||++|+.||... +.......... +.. ..+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~--------~~~~~~~~~~~-~~~----------~~p 215 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--------DHEKLFELILM-EEI----------RFP 215 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC--------CHHHHHHHHHc-CCC----------CCC
Confidence 57999999999999999999999999999999999999999632 11222222211 111 123
Q ss_pred hHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1043 HDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1043 ~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
.....++.+++.+|++.||++|| ++.|++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 34456789999999999999999 78888753
No 72
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.2e-35 Score=335.48 Aligned_cols=253 Identities=22% Similarity=0.325 Sum_probs=205.7
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36899999999999999999765 58999999997542 234566889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999999999763 4688999999999999999999999 999999999999999999999999999976543
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
......|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..+........... +...
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~~~---~~~~ 220 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST--------PNETWENLKYWKET---LQRP 220 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC--------HHHHHHHHHhcccc---ccCC
Confidence 2234579999999999999999999999999999999999999997421 11221221111110 1100
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.........+.++.+++.+|++.+|++||++.|++++
T Consensus 221 ~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 221 VYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0000012345678999999999999999999999875
No 73
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=335.06 Aligned_cols=245 Identities=24% Similarity=0.348 Sum_probs=203.4
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56899999999999999999764 58999999987532 234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 98 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred cCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 999999999999874 4688999999999999999999999 99999999999999999999999999998764322
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
....|++.|+|||++.+..++.++|||||||++|||++|+.||... ...+..... ..+..
T Consensus 173 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~--------~~~~~~~~i-~~~~~------- 232 (329)
T PTZ00263 173 ----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD--------TPFRIYEKI-LAGRL------- 232 (329)
T ss_pred ----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC--------CHHHHHHHH-hcCCc-------
Confidence 2357899999999999999999999999999999999999999632 112222222 22211
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPS-----MRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~~ 1073 (1082)
..+.....++.+++.+|++.||++||+ +.+++.+
T Consensus 233 ---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 233 ---KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 112233457889999999999999996 6777644
No 74
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.9e-35 Score=321.35 Aligned_cols=254 Identities=25% Similarity=0.417 Sum_probs=209.6
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.+.|++.++||+|+||.||+|...+++.||+|.+..... ....+.+|+.++++++|+|++++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 356889999999999999999888899999999875443 3567899999999999999999999874 45789999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++.......+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+..........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence 999999999876666789999999999999999999999 99999999999999999999999999998765333322
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||++.+..++.++||||||+++||+++ |+.||.... ..+..... ..+...
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~-~~~~~~-------- 222 (260)
T cd05067 160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--------NPEVIQNL-ERGYRM-------- 222 (260)
T ss_pred ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--------hHHHHHHH-HcCCCC--------
Confidence 333456778999999998889999999999999999998 999986321 11222221 111111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
..+...+.++.+++.+|++.+|++||++.++...|+.
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 -PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1122345679999999999999999999999999975
No 75
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-36 Score=311.58 Aligned_cols=261 Identities=23% Similarity=0.359 Sum_probs=205.8
Q ss_pred HhcCccccceecccCceEEEEEE-EcCCeEEEEEEee--cCccccHHHHHHHHHHHhccCCCceeeEeeeecc-----CC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLS--VGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS-----EA 870 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 870 (1082)
....|...+.||+|+||.|+.|. ..+|+.||||++. .......++..+|+++++.++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 34566667899999999999994 5579999999997 4455567788999999999999999999998865 35
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
..|+|+|+| +.+|...++.. +.++.+.+..++.|+++||.|+|+. +|+|||+||+|++++.+...||+|||+|+
T Consensus 100 DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccccee
Confidence 689999999 67999999873 4599999999999999999999999 99999999999999999999999999999
Q ss_pred ecCCC-CCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH-hcC
Q 045553 951 LLGTS-ETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL-LQG 1027 (1082)
Q Consensus 951 ~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 1027 (1082)
..... ....++.++.|..|+|||.+.. ..|+.+.||||.||++.||++|+.-|.+... .+-+..+. .-|
T Consensus 174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~--------v~Ql~lI~~~lG 245 (359)
T KOG0660|consen 174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY--------VHQLQLILELLG 245 (359)
T ss_pred eccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch--------HHHHHHHHHhcC
Confidence 87543 2234567888999999998864 6899999999999999999999998865321 11111111 111
Q ss_pred CCccccccccCC-----------CC---C-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1028 RPCEFFTAGLWD-----------CG---P-----HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1028 ~~~~~~d~~l~~-----------~~---~-----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+.+..-..+.+ .. + +.......+++.+|+..||.+|+|+.|.+++
T Consensus 246 tP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 246 TPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred CCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111110001100 00 0 2345678899999999999999999999865
No 76
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=327.00 Aligned_cols=251 Identities=24% Similarity=0.405 Sum_probs=217.3
Q ss_pred cCccccceecccCceEEEEEE-EcCCeEEEEEEeecCccc--cHHHHHHHHHHHhccCCCceeeEeeeeccCCe-EEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQ--GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE-MFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lV~ 876 (1082)
++|...+++|+|+||.++.++ ..+++.+++|++...... ..+....|+.++++++|||||.+.+.+..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 578899999999999999985 445789999999765432 33457889999999999999999999999888 99999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
+|++||++.+.+...++..++++++.+++.|++.|+.|||+. +|+|||||+.||+++.+..|||+|||+|+.+....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 999999999999988778899999999999999999999998 99999999999999999999999999999987665
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
. ...+++||+.|+.||.+.+.+|..|+||||+||++|||++-+++|... +....+..+....
T Consensus 161 ~-~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~--------~m~~Li~ki~~~~--------- 222 (426)
T KOG0589|consen 161 S-LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS--------NMSELILKINRGL--------- 222 (426)
T ss_pred h-hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc--------chHHHHHHHhhcc---------
Confidence 3 345578999999999999999999999999999999999999999743 2333333332221
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....|..+..++..++..|++.+|+.||++.+++.+
T Consensus 223 -~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 -YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 123456777899999999999999999999999876
No 77
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=9.1e-35 Score=344.97 Aligned_cols=250 Identities=23% Similarity=0.280 Sum_probs=205.9
Q ss_pred CccccceecccCceEEEEEEEc-C-CeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-P-GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.|.+.+.||+|+||.||+|... + +..||+|.+..........+.+|+++++.++||||+++++++..++..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4889999999999999999543 4 6788999876555555567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 880 PGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 880 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
++|+|.++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988653 234688999999999999999999999 999999999999999999999999999987653322
Q ss_pred -ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 958 -HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 958 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+.+...... ...
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~--------~~~~~~~~~~~~-~~~------ 289 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP--------SQREIMQQVLYG-KYD------ 289 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhC-CCC------
Confidence 2234457999999999999999999999999999999999999999632 222333332221 111
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
..+...+.++.+++.+|++.+|++||++.+++.
T Consensus 290 ---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 ---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 112234567999999999999999999999865
No 78
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=9.7e-35 Score=318.21 Aligned_cols=253 Identities=25% Similarity=0.415 Sum_probs=206.6
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
++|.+.+.||+|+||.||+|....+..||+|++.... ...+.+.+|++++++++|+|++++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 4588899999999999999988777789999876543 33467889999999999999999999875 456889999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+++|.++++......+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||.+...........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence 99999999876556689999999999999999999999 999999999999999999999999999987644332222
Q ss_pred cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 961 TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....++..|+|||+..+..++.++||||||+++|||++ |+.||.... ..+..... ..+...
T Consensus 161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~~-~~~~~~--------- 222 (260)
T cd05069 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV--------NREVLEQV-ERGYRM--------- 222 (260)
T ss_pred CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH-HcCCCC---------
Confidence 23446778999999998899999999999999999999 888886321 11111111 111111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
..+...+..+.+++.+|++.+|++||++++|++.|++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1223445689999999999999999999999999975
No 79
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=5.3e-35 Score=325.42 Aligned_cols=259 Identities=24% Similarity=0.402 Sum_probs=210.7
Q ss_pred hcCccccceecccCceEEEEEEE------cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI------IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
..+|.+.+.||+|+||.||++.. .++..+|+|.+........+.+.+|++++++++|||++++++++......+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 35688899999999999999964 234679999987665556678999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEE
Q 045553 874 LIYNYLPGGNLEKFIQDRP-----------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAY 942 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 942 (1082)
+||||+++++|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 9999999999999997542 23589999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHH
Q 045553 943 LSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWA 1020 (1082)
Q Consensus 943 l~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1020 (1082)
|+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |..||.... .....
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~--------~~~~~ 232 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--------NNEVI 232 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHH
Confidence 9999999865432221 1222345778999999999899999999999999999998 888886322 11222
Q ss_pred HHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1021 SMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1021 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.. +..+.... .+...+.++.+++.+|++.+|.+||++.||.+.|+++..
T Consensus 233 ~~-i~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 233 EC-ITQGRVLQ---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HH-HHcCCcCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 22 22222111 112234579999999999999999999999999998764
No 80
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.9e-35 Score=334.02 Aligned_cols=260 Identities=24% Similarity=0.390 Sum_probs=206.6
Q ss_pred cCccccceecccCceEEEEEEEc------CCeEEEEEEeecCcc-ccHHHHHHHHHHHhcc-CCCceeeEeeeecc-CCe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRV-QHPNLVTLIGYHVS-EAE 871 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~-~~~ 871 (1082)
.+|++.+.||+|+||.||+|... +++.||+|++..... ...+.+..|+++++++ +|+||+++++++.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 47999999999999999999532 347899999875432 3345678899999999 89999999998764 457
Q ss_pred EEEEEeecCCCCHHHHHhhCC-----------------------------------------------------------
Q 045553 872 MFLIYNYLPGGNLEKFIQDRP----------------------------------------------------------- 892 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------- 892 (1082)
.+++|||+++++|.+++....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 889999999999999986432
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc-cccCcccCCCccc
Q 045553 893 RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVA 971 (1082)
Q Consensus 893 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~a 971 (1082)
...+++..+.+++.||+.|++|||+. +|+||||||+||+++.++.++|+|||+++.+...... ......++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 12689999999999999999999999 9999999999999999999999999999876433222 2223456778999
Q ss_pred chhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHH
Q 045553 972 PEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEML 1050 (1082)
Q Consensus 972 PE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 1050 (1082)
||++.+..++.++|||||||++|||++ |..||...... +........+... ..+.....++.
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~~~ 306 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--------EEFCRRLKEGTRM---------RAPEYATPEIY 306 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--------HHHHHHHhccCCC---------CCCccCCHHHH
Confidence 999999999999999999999999998 99998642111 1111222222111 11223456799
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1051 NLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1051 ~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
+++.+|++.+|++||++.||+++|+++...
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999987654
No 81
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.4e-35 Score=324.78 Aligned_cols=255 Identities=24% Similarity=0.402 Sum_probs=208.1
Q ss_pred cCccccceecccCceEEEEEEEc------CCeEEEEEEeecCccc-cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRFQ-GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
.+|.+.+.||+|+||.||+|... ++..||||.+...... ..+.+.+|++++++++|+|++++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 46888999999999999999653 3478999998765443 4578999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcE
Q 045553 874 LIYNYLPGGNLEKFIQDRP------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNA 941 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 941 (1082)
+||||+++++|.++++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 9999999999999997642 24578999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHH
Q 045553 942 YLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAW 1019 (1082)
Q Consensus 942 kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~ 1019 (1082)
||+|||+++........ ......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ....
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~--------~~~~ 233 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS--------NEEV 233 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC--------HHHH
Confidence 99999999865332221 1223346788999999999999999999999999999998 999986321 1122
Q ss_pred HHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1020 ASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1020 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
.... ..+... ..+...+..+.+++.+||+.+|++||++.||++.|++
T Consensus 234 ~~~~-~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 234 IECI-TQGRLL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHH-HcCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 2222 122111 1122345689999999999999999999999999863
No 82
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=9.8e-35 Score=322.72 Aligned_cols=265 Identities=29% Similarity=0.415 Sum_probs=206.4
Q ss_pred cCccccceecccCceEEEEEEEc-----CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeecc--CCeEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-----PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS--EAEMF 873 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 873 (1082)
.+|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++|||++++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46888999999999999999642 578999999887666667789999999999999999999997653 35689
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 999999999999999764 34589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcc--ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCC----CCC---ccHHHHHHHHH
Q 045553 954 TSETHA--TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSF----GNG---FNIVAWASMLL 1024 (1082)
Q Consensus 954 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~----~~~---~~~~~~~~~~~ 1024 (1082)
...... .....++..|+|||+..+..++.++||||||+++|||++|..++......+ +.. ...........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL 239 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence 332211 111234456999999998899999999999999999999887654221000 000 00000111111
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+ .....+...+.++.+++.+||+.+|++|||+.||++.|+.++
T Consensus 240 ~~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 240 KNN---------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred hcC---------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 111 111122344568999999999999999999999999999874
No 83
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.9e-35 Score=332.92 Aligned_cols=246 Identities=24% Similarity=0.356 Sum_probs=203.0
Q ss_pred hcCccccceecccCceEEEEEEEcC--CeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP--GVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~--~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.++|++.+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+++++.++||||+++++++.+....++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3469999999999999999996543 3689999986432 2345668899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999874 4689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ....... +..+..
T Consensus 184 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~--------~~~~~~~-i~~~~~----- 245 (340)
T PTZ00426 184 R----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE--------PLLIYQK-ILEGII----- 245 (340)
T ss_pred C----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC--------HHHHHHH-HhcCCC-----
Confidence 2 234579999999999999889999999999999999999999996321 1111112 222211
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
..|......+.+++.+|++.+|++|+ +++|+.++
T Consensus 246 -----~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 -----YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -----CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 12233445788999999999999995 88888764
No 84
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-35 Score=314.00 Aligned_cols=255 Identities=22% Similarity=0.322 Sum_probs=202.1
Q ss_pred HHhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCcc--------------ccHHHHHHHHHHHhccCCCceeeE
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF--------------QGVQQFAAEIRTLGRVQHPNLVTL 862 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~l 862 (1082)
...++|++.+.||+|.||.|-+|+ ..+++.||||++..... ...+...+|+.+++++.|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 356789999999999999999995 55789999999964321 123578899999999999999999
Q ss_pred eeeeccC--CeEEEEEeecCCCCHHHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC
Q 045553 863 IGYHVSE--AEMFLIYNYLPGGNLEKFIQDRPRRT-VEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL 939 (1082)
Q Consensus 863 ~~~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 939 (1082)
+++..+. +..|+|+||+..|.+...=. ... +++.+++++++++..||+|||.+ +||||||||+|+|++++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 9998764 67899999998887744322 233 89999999999999999999999 999999999999999999
Q ss_pred cEEEeecccceecCCCCC----ccccCcccCCCcccchhcccCC----CCchhhHHHHHHHHHHHHhCCCCCCCCccCCC
Q 045553 940 NAYLSDFGLARLLGTSET----HATTDVAGTFGYVAPEYAMTCR----VSDKADVYSFGVVLLELISDKKALDPSFCSFG 1011 (1082)
Q Consensus 940 ~~kl~DfGla~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slGvll~elltg~~p~~~~~~~~~ 1011 (1082)
++||+|||.+..+..... ......+||+.|+|||...++. .+.+.||||+||.+|.|+.|+.||...+
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~---- 323 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF---- 323 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch----
Confidence 999999999987733221 1223368999999999987632 3568999999999999999999997432
Q ss_pred CCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1012 NGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1012 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
.......++.+ .+.-....+..+.+..|+.+++++||+.|.+..+|..+..
T Consensus 324 ----~~~l~~KIvn~---------pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 324 ----ELELFDKIVND---------PLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred ----HHHHHHHHhcC---------cccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 22222222211 1111122345678999999999999999999999987653
No 85
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.9e-35 Score=330.12 Aligned_cols=239 Identities=25% Similarity=0.339 Sum_probs=196.3
Q ss_pred ecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 809 IGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 809 lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999654 57899999986432 23456678899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcc
Q 045553 885 EKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVA 964 (1082)
Q Consensus 885 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 964 (1082)
.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .......
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 154 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTFC 154 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccccc
Confidence 9999763 4689999999999999999999999 99999999999999999999999999997543222 2233457
Q ss_pred cCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChH
Q 045553 965 GTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHD 1044 (1082)
Q Consensus 965 gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1044 (1082)
||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+......... . ..+..
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~--------~~~~~~~~~~~~~-~----------~~~~~ 215 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE--------NVNEMYRKILQEP-L----------RFPDG 215 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC--------CHHHHHHHHHcCC-C----------CCCCc
Confidence 999999999999999999999999999999999999999632 2233333332211 0 12233
Q ss_pred HHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 045553 1045 DLIEMLNLAIMCTGESLSSRPS---MRQVAQ 1072 (1082)
Q Consensus 1045 ~~~~l~~li~~cl~~~p~~RPt---~~ev~~ 1072 (1082)
...++.+++.+|++.+|++||+ +.|++.
T Consensus 216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 4567899999999999999985 455544
No 86
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=8.7e-35 Score=318.84 Aligned_cols=255 Identities=25% Similarity=0.416 Sum_probs=211.4
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|.+.+.||+|+||.||+|...++..||||.+.... ...+++.+|+.++++++|+|++++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 45789999999999999999988778899999987543 34577899999999999999999999999889999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++.......+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.+.......
T Consensus 84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (261)
T cd05034 84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA 160 (261)
T ss_pred CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence 999999999886666799999999999999999999999 99999999999999999999999999998765432222
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||.+.+..++.++||||+|+++||+++ |+.||.... .............
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--------~~~~~~~~~~~~~---------- 222 (261)
T cd05034 161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT--------NREVLEQVERGYR---------- 222 (261)
T ss_pred hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCC----------
Confidence 223345678999999999899999999999999999998 898885321 1122222211110
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
...+...+.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 01122335689999999999999999999999999875
No 87
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.1e-35 Score=323.63 Aligned_cols=267 Identities=26% Similarity=0.363 Sum_probs=205.5
Q ss_pred ccccceecccCceEEEEEEE-----cCCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeEEE
Q 045553 803 FNVQNCIGSGGFGATYKAEI-----IPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEMFL 874 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 874 (1082)
|++.+.||+|+||+||++.. .++..||+|.+..... .....+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 38889999999999988642 3578899999875432 3456788999999999999999999987653 45899
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++++|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++....
T Consensus 86 v~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred EecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 99999999999999763 589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCc--cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 955 SETH--ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 955 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.... ......++..|+|||...+..++.++||||||+++|||++|+.|+........ ....+...........+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE---EMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh---hhhcccccccchhhhhhh
Confidence 3221 11223456679999999988999999999999999999999999864321110 000000000000011111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.+.......+...+.++.+++.+|++.+|++||++++|++.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1222222233445678999999999999999999999999999875
No 88
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.4e-34 Score=322.45 Aligned_cols=261 Identities=25% Similarity=0.342 Sum_probs=197.6
Q ss_pred cCccccceecccCceEEEEEEEc--CCeEEEEEEeecCcc--ccHHHHHHHHHHHhcc---CCCceeeEeeeec-----c
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII--PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRV---QHPNLVTLIGYHV-----S 868 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~--~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~-----~ 868 (1082)
.+|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36889999999999999999652 468899999865432 2234556677776665 6999999999875 2
Q ss_pred CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 869 EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 869 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
....++||||++ ++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999995 6999999876666789999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
++..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||.... .......+........
T Consensus 157 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~-----~~~~~~~i~~~~~~~~ 229 (290)
T cd07862 157 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-----DVDQLGKILDVIGLPG 229 (290)
T ss_pred eEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC-----HHHHHHHHHHHhCCCC
Confidence 9876433 22334568999999999998899999999999999999999999997431 1111111111110000
Q ss_pred Ccc----------ccccccCC---CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1029 PCE----------FFTAGLWD---CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1029 ~~~----------~~d~~l~~---~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
..+ .+...... .........+.+++.+|++.+|++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000 00000000 000123456789999999999999999999985
No 89
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.4e-34 Score=316.49 Aligned_cols=259 Identities=25% Similarity=0.400 Sum_probs=211.3
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|+. .+++.||||.+.... ......+.+|+++++.++|||++++++++.+.+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4789999999999999999965 468999999876432 233456889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 877 NYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999999886432 34578999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
... ......|+..|+|||.+.+..++.++||||+|+++|||++|+.||... ......+..... ......
T Consensus 159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~--- 227 (267)
T cd08228 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD------KMNLFSLCQKIE-QCDYPP--- 227 (267)
T ss_pred hhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc------cccHHHHHHHHh-cCCCCC---
Confidence 322 222346888999999999888999999999999999999999998632 122233333221 111111
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+...+..+.+++.+||+.+|++||++.||++.+++++
T Consensus 228 -----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 228 -----LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -----CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 112234567999999999999999999999999999875
No 90
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=6e-35 Score=329.43 Aligned_cols=256 Identities=25% Similarity=0.440 Sum_probs=205.6
Q ss_pred cCccccceecccCceEEEEEEEc-CCe----EEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGV----VVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.+|++.+.||+|+||.||+|.+. ++. .||+|++.... ....+++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46899999999999999999754 333 48999986543 34456788999999999999999999998764 5789
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
|+||+++|+|.++++.. ...+++..+.+++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 86 v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccccC
Confidence 99999999999999875 34688999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcc-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 955 SETHA-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 955 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
..... .....++..|+|||++.+..++.++|||||||++|||++ |+.||+.. ...++ ......+...
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~--------~~~~~-~~~~~~~~~~-- 230 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEI-SSILEKGERL-- 230 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------CHHHH-HHHHhCCCCC--
Confidence 33221 122334678999999999999999999999999999998 99998632 11222 1222222111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..+......+.+++.+||+.+|++||++.+++..+..+..
T Consensus 231 -------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 231 -------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred -------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 1122344678999999999999999999999999987654
No 91
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-35 Score=311.88 Aligned_cols=258 Identities=25% Similarity=0.340 Sum_probs=197.6
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCC-----eEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA-----EMFLI 875 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lV 875 (1082)
.|...+++|.|+||.||+|... ++..||||+.-..... -.+|+++|+.+.|||||+++.+|.... ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4667799999999999999654 4799999998654332 257999999999999999999886432 24679
Q ss_pred EeecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC-CcEEEeecccceec
Q 045553 876 YNYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN-LNAYLSDFGLARLL 952 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla~~~ 952 (1082)
||||+ .+|.++++.. ....++.-.+.-+..||++||+|||+. +|+||||||.|+|+|.+ |.+||||||.|+..
T Consensus 101 leymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 99995 5999999853 245678888889999999999999998 99999999999999976 89999999999988
Q ss_pred CCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH-------
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL------- 1024 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------- 1024 (1082)
...+.. ..+..|..|+|||.+.+ ..|+.+.||||.|||+.||+.|+.-|.+.. ....++..++..-
T Consensus 177 ~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s----~~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 177 VKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS----SVDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred ccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC----HHHHHHHHHHHhCCCCHHHH
Confidence 665544 45678999999999987 579999999999999999999998886432 1122222222110
Q ss_pred --hcCCCccccccccCCC-----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1025 --LQGRPCEFFTAGLWDC-----GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1025 --~~~~~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
......+.-.+.+... .......+..+++.+++.++|.+|.++.|++++
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 0011111111222211 123456789999999999999999999998753
No 92
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7.7e-35 Score=323.33 Aligned_cols=255 Identities=25% Similarity=0.418 Sum_probs=205.5
Q ss_pred cCccccceecccCceEEEEEEE-----cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-----IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
..|++.+.||+|+||.||+|.. .++..||+|.+.... ......+.+|++++++++||||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4578889999999999999964 246789999987533 2334678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC
Q 045553 875 IYNYLPGGNLEKFIQDRP---------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL 939 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 939 (1082)
||||+++++|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 999999999999986432 23578899999999999999999999 999999999999999999
Q ss_pred cEEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHH
Q 045553 940 NAYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIV 1017 (1082)
Q Consensus 940 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~ 1017 (1082)
.+||+|||+++....... .......++..|+|||+..+..++.++||||||+++|||++ |..||... ...
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~--------~~~ 233 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF--------SNQ 233 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------CHH
Confidence 999999999986543322 22233446778999999998889999999999999999998 88888532 111
Q ss_pred HHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1018 AWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1018 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
.... ........ ..+...+.++.+++.+|++.+|++||++.+|.++|+.
T Consensus 234 ~~~~-~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 234 EVIE-MVRKRQLL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHH-HHHcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 2222 22222111 1223345688999999999999999999999999874
No 93
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.6e-35 Score=329.63 Aligned_cols=242 Identities=23% Similarity=0.285 Sum_probs=198.0
Q ss_pred ceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 807 NCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
+.||+|+||.||+|+. .+|..||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999964 468999999997542 233456778999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccC
Q 045553 883 NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTD 962 (1082)
Q Consensus 883 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 962 (1082)
+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... .....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~ 154 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKT 154 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Ccccc
Confidence 999988763 4689999999999999999999999 99999999999999999999999999987532221 22234
Q ss_pred cccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCC
Q 045553 963 VAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGP 1042 (1082)
Q Consensus 963 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 1042 (1082)
..|++.|+|||++.+..++.++|||||||++|||++|+.||.... ............ . ..+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~--------~~~~~~~~~~~~-~----------~~p 215 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILMEE-I----------RFP 215 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHhcCC-C----------CCC
Confidence 579999999999999999999999999999999999999996321 112222221111 0 122
Q ss_pred hHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1043 HDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1043 ~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
.....++.+++.+|++.+|++|| ++.+++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 34456889999999999999998 88888753
No 94
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.6e-34 Score=321.29 Aligned_cols=262 Identities=20% Similarity=0.293 Sum_probs=200.6
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++|++.++||+|+||.||+|... ++..||+|+++.... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46899999999999999999654 689999999865432 2345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~- 158 (288)
T cd07871 85 LD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK- 158 (288)
T ss_pred CC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc-
Confidence 96 5999998765 34578999999999999999999999 999999999999999999999999999976543222
Q ss_pred cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC----------
Q 045553 959 ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG---------- 1027 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------- 1027 (1082)
......|++.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+.......
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK-----EELHLIFRLLGTPTEETWPGITS 233 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCChHHhhcccc
Confidence 2233468999999999865 56899999999999999999999999643211 1111111111000
Q ss_pred --CCccccccccCCC----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1028 --RPCEFFTAGLWDC----GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1028 --~~~~~~d~~l~~~----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......+..... .......++.+++.+|++.||.+|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000000000 011234578899999999999999999999753
No 95
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.9e-34 Score=319.09 Aligned_cols=257 Identities=20% Similarity=0.359 Sum_probs=205.6
Q ss_pred HhcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
..++|++.+.||+|+||.||+|... ++..||+|++.... .....++.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567999999999999999998643 25679999986432 2345678899999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEE
Q 045553 872 MFLIYNYLPGGNLEKFIQDRP--------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYL 943 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 943 (1082)
.++||||+++++|.++++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 999999999999999997632 12467889999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCcc-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHH
Q 045553 944 SDFGLARLLGTSETHA-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWAS 1021 (1082)
Q Consensus 944 ~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 1021 (1082)
+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||... .......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~--------~~~~~~~ 232 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM--------SNEQVLR 232 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC--------CHHHHHH
Confidence 9999997654332211 122345778999999999899999999999999999999 67787532 1122222
Q ss_pred HHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1022 MLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1022 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
... .+.... .+...+..+.+++.+|++.+|++||++.|++++|++
T Consensus 233 ~~~-~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 FVM-EGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHH-cCCcCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 222 221111 122345679999999999999999999999999864
No 96
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.9e-35 Score=330.92 Aligned_cols=252 Identities=25% Similarity=0.314 Sum_probs=202.1
Q ss_pred CccccceecccCceEEEEEEE----cCCeEEEEEEeecCc----cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeE
Q 045553 802 GFNVQNCIGSGGFGATYKAEI----IPGVVVAVKRLSVGR----FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 872 (1082)
+|++.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+++++.+ +|++|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999864 357899999986432 22345678899999999 489999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999999999763 4689999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
............||..|+|||++.+. .++.++|||||||++|||++|+.||...... .......... ....
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~~~~~~~~-~~~~--- 227 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER----NTQSEVSRRI-LKCD--- 227 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC----CCHHHHHHHH-hcCC---
Confidence 44433334456799999999999865 4788999999999999999999999643211 1112222221 1111
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
+ ..+......+.+++.+|++.||++|| ++.+++++
T Consensus 228 ---~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 228 ---P----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred ---C----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 1 12233456789999999999999999 67777653
No 97
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3e-35 Score=334.02 Aligned_cols=253 Identities=22% Similarity=0.309 Sum_probs=205.6
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||+||+|+. .+++.||+|+++.... ...+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3688999999999999999965 4689999999975422 34566889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..+....
T Consensus 81 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 999999999999875 34689999999999999999999999 99999999999999999999999999998775444
Q ss_pred CccccCcccCCCcccchhcc------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 957 THATTDVAGTFGYVAPEYAM------TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
........||+.|+|||++. ...++.++|||||||++|||++|+.||... ................
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~--------~~~~~~~~i~~~~~~~ 228 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEG--------TSAKTYNNIMNFQRFL 228 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCC--------CHHHHHHHHHcCCCcc
Confidence 33333457899999999986 456788999999999999999999999632 1222333322221111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. ......+..+.+++..|++ +|++||++.+++++
T Consensus 229 ~~-------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 229 KF-------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CC-------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 11 1112345678899999998 99999999998864
No 98
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=295.98 Aligned_cols=253 Identities=24% Similarity=0.342 Sum_probs=208.4
Q ss_pred HhcCccccceecccCceEEEEE-EEcCCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++.|++.+.||+|.|+.||+. ...+|+.+|+|++... ...+.+++.+|+++-+.++||||+++...+.+....|+|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 4567889999999999999998 5667999999988543 234678899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc---CCCcEEEeecccceec
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD---NNLNAYLSDFGLARLL 952 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~DfGla~~~ 952 (1082)
+|+|.|++|..-+-.+ ..+++..+-..+.||++++.|.|.. +|||||+||+|+++. ....+|++|||+|..+
T Consensus 89 Fe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred EecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999999997666543 4578888999999999999999999 999999999999995 3457999999999988
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
+ .......++||++|||||+....+|+..+|||+.||++|-++.|..||.... -....+.+ ..+.+.
T Consensus 164 ~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--------~~rlye~I-~~g~yd-- 230 (355)
T KOG0033|consen 164 N--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYEQI-KAGAYD-- 230 (355)
T ss_pred C--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--------HHHHHHHH-hccccC--
Confidence 7 4456677899999999999999999999999999999999999999997421 11222222 222211
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
++++.+ ....++...++++|+..||.+|.|+.|.+.+
T Consensus 231 ~~~~~w----~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 231 YPSPEW----DTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CCCccc----CcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 222222 2445688999999999999999999887653
No 99
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-34 Score=327.15 Aligned_cols=199 Identities=26% Similarity=0.470 Sum_probs=174.8
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.++|++.++||+|+||.||+|... ++..+|+|.+..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367999999999999999999765 588899998875432 334678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++++|.+++... ..+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||++..+...
T Consensus 84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-- 157 (333)
T cd06650 84 HMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (333)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--
Confidence 99999999999864 45889999999999999999999752 7999999999999999999999999998765322
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDP 1005 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~ 1005 (1082)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 12234689999999999998999999999999999999999999964
No 100
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.1e-34 Score=328.71 Aligned_cols=251 Identities=20% Similarity=0.315 Sum_probs=200.1
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999654 57899999997542 23345677888888776 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|..++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTS 154 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Cccc
Confidence 9999988763 4689999999999999999999999 99999999999999999999999999987532221 1223
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...||+.|+|||++.+..++.++|||||||++|||++|+.||+..............++...+..... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----------~~ 224 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----------RI 224 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC----------CC
Confidence 45799999999999999999999999999999999999999964322211222333444443333221 12
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCC------HHHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPS------MRQVAQQ 1073 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt------~~ev~~~ 1073 (1082)
|......+.+++.+|++.||++||+ +.+++++
T Consensus 225 p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 225 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 3344567889999999999999998 5666543
No 101
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=8.3e-35 Score=329.39 Aligned_cols=242 Identities=21% Similarity=0.301 Sum_probs=199.0
Q ss_pred ceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 807 NCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
+.||+|+||.||+|+. .+++.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999964 468999999997542 234567788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccC
Q 045553 883 NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTD 962 (1082)
Q Consensus 883 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 962 (1082)
+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMKT 154 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCc-cccccc
Confidence 999998763 4689999999999999999999999 9999999999999999999999999998754222 122334
Q ss_pred cccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCC
Q 045553 963 VAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGP 1042 (1082)
Q Consensus 963 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 1042 (1082)
..|++.|+|||++.+..++.++|||||||++|||++|+.||... ...+......... . ..+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~--------~~~~~~~~~~~~~-~----------~~p 215 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--------DHEKLFELILMED-I----------KFP 215 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCC--------CHHHHHHHhccCC-c----------cCC
Confidence 57999999999999999999999999999999999999999632 1122222221111 0 122
Q ss_pred hHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1043 HDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1043 ~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
.....++.+++.+|++.+|++|| ++.|++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 33456789999999999999997 88988764
No 102
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5.8e-35 Score=335.85 Aligned_cols=254 Identities=21% Similarity=0.302 Sum_probs=204.7
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3457999999999999999999654 68899999986432 2334557889999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999999753 478889999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccCcccCCCcccchhcccC----CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTC----RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
..........||+.|+|||++.+. .++.++|||||||++|||++|+.||... ................
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~--------~~~~~~~~i~~~~~~~ 266 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--------SLVGTYSKIMDHKNSL 266 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCC--------CHHHHHHHHHcCCCcC
Confidence 333233456799999999998653 4788999999999999999999999732 2222222222211111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSS--RPSMRQVAQQ 1073 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~ev~~~ 1073 (1082)
.. ......+.++.+++.+|++.+|++ ||++.|++++
T Consensus 267 ~~-------~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 267 TF-------PDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CC-------CCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 11 111234568899999999999998 9999999765
No 103
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.7e-34 Score=314.34 Aligned_cols=247 Identities=25% Similarity=0.389 Sum_probs=201.6
Q ss_pred ceecccCceEEEEEEEcCCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCHH
Q 045553 807 NCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNLE 885 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 885 (1082)
++||+|+||.||+|...++..||+|.+..... .....+.+|++++++++|||++++++++......++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 46899999999999888889999999875432 23456889999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCccc
Q 045553 886 KFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVAG 965 (1082)
Q Consensus 886 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~g 965 (1082)
+++... ...+++..+..++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++...............+
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 81 SFLRKK-KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 998765 34678999999999999999999999 99999999999999999999999999997654322222222345
Q ss_pred CCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChH
Q 045553 966 TFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHD 1044 (1082)
Q Consensus 966 t~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1044 (1082)
+..|+|||+..+..++.++||||||+++||+++ |..||.... .... ......+... ..+..
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~--------~~~~-~~~~~~~~~~---------~~~~~ 218 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMT--------NQQA-REQVEKGYRM---------SCPQK 218 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCC--------HHHH-HHHHHcCCCC---------CCCCC
Confidence 678999999998899999999999999999998 888986321 1111 1122222111 12233
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1045 DLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1045 ~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
.+..+.+++.+|++.+|++||++.|++++|.
T Consensus 219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 219 CPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 4568999999999999999999999999875
No 104
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.5e-34 Score=342.75 Aligned_cols=255 Identities=26% Similarity=0.316 Sum_probs=207.4
Q ss_pred HHhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCC----
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA---- 870 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 870 (1082)
....+|++.+.||+|+||+||+|+ ..+|+.||||++.... ......+.+|+..+..++|+|++++.+.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 345789999999999999999996 4568999999986543 234566889999999999999999988665332
Q ss_pred ----eEEEEEeecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEe
Q 045553 871 ----EMFLIYNYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLS 944 (1082)
Q Consensus 871 ----~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 944 (1082)
..++||||+++|+|.++++.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 3689999999999999997542 35689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHH
Q 045553 945 DFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASML 1023 (1082)
Q Consensus 945 DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1023 (1082)
|||+++.+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... .....+...
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~--------~~~~~~~~~ 257 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE--------NMEEVMHKT 257 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHH
Confidence 9999987643222 2233467999999999999999999999999999999999999999632 233333333
Q ss_pred HhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1024 LLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1024 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
... ... ..+...+.++.+++.+|++.+|++||++.+++++
T Consensus 258 ~~~-~~~---------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 LAG-RYD---------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred hcC-CCC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 221 111 1233445689999999999999999999999764
No 105
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.5e-34 Score=316.66 Aligned_cols=254 Identities=24% Similarity=0.425 Sum_probs=208.9
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|++.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+|++++.+++.. ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 45789999999999999999987778889999887542 345678899999999999999999999887 7789999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++.......+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+..........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 159 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 159 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCccc
Confidence 999999999876566789999999999999999999998 99999999999999999999999999998764433322
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||++.+..++.++|||||||++|++++ |+.||.... ...... ....+...
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-----~~~~~~----~~~~~~~~-------- 222 (260)
T cd05073 160 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-----NPEVIR----ALERGYRM-------- 222 (260)
T ss_pred ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC-----HHHHHH----HHhCCCCC--------
Confidence 233446678999999998889999999999999999998 888886321 111111 11222111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
..+...+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 -PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1122345679999999999999999999999999975
No 106
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.3e-34 Score=328.25 Aligned_cols=251 Identities=20% Similarity=0.314 Sum_probs=201.4
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999654 68899999997542 23345678899999888 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-DTTS 154 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCC-Cccc
Confidence 9999988763 4689999999999999999999999 99999999999999999999999999987432211 2233
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...||+.|+|||++.+..++.++||||+||++|||++|+.||+..............+....+...... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 224 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR----------I 224 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC----------C
Confidence 457999999999999999999999999999999999999999743222111223334444443333211 2
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCC------HHHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPS------MRQVAQQ 1073 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt------~~ev~~~ 1073 (1082)
|...+.++.+++.+|++.+|.+||+ +.+++++
T Consensus 225 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 225 PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 2334567899999999999999997 6677643
No 107
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.7e-34 Score=319.67 Aligned_cols=256 Identities=23% Similarity=0.383 Sum_probs=202.9
Q ss_pred cCccccceecccCceEEEEEEEc-CCe----EEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGV----VVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.+|++.+.||+|+||+||+|.+. +++ .|++|.+.... .....++..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46888899999999999999764 343 47888875432 2334667888889999999999999998754 55788
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
|+||+++|+|.++++.. ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++....
T Consensus 86 i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 99999999999999865 34689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 955 SET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 955 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
... .......++..|+|||++.+..++.++||||||+++||+++ |+.||..... .. ....+..+....
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--------~~-~~~~~~~~~~~~- 231 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--------HE-VPDLLEKGERLA- 231 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HH-HHHHHHCCCcCC-
Confidence 322 22233457789999999999899999999999999999998 9988864321 11 112222222111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.+......+.+++.+||..+|++||++.|+++.|..+..
T Consensus 232 --------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 232 --------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred --------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 112234567889999999999999999999999988653
No 108
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=320.46 Aligned_cols=254 Identities=26% Similarity=0.425 Sum_probs=218.6
Q ss_pred ccccceecccCceEEEEEEEc---CC--eEEEEEEeecC-ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 803 FNVQNCIGSGGFGATYKAEII---PG--VVVAVKRLSVG-RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~---~~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
....++||.|-||.||+|... .| -.||||..+.. ..+..+.|..|.-+|+.++||||++++|+|.+ ...|+||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEE
Confidence 445678999999999999532 23 45888888764 34567889999999999999999999999975 4689999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
|.++-|.|..|++.+ ...++..+...++.||+.||+|||+. ++|||||..+|||+....-+|++|||+++.+..+.
T Consensus 470 EL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 470 ELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred ecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence 999999999999987 56789999999999999999999999 99999999999999999999999999999998777
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.+..+...-...|||||.+.-.+++.++|||.|||.+||++. |..||.... ..++.-.++.
T Consensus 546 yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk------------------NsDVI~~iEn 607 (974)
T KOG4257|consen 546 YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK------------------NSDVIGHIEN 607 (974)
T ss_pred hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc------------------ccceEEEecC
Confidence 666555566779999999999999999999999999999865 999996432 2234445555
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.-+-+.|+.++..+..++.+||+++|.+||++.|+...|+++..
T Consensus 608 GeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 608 GERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 66667889999999999999999999999999999999987643
No 109
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.9e-34 Score=321.93 Aligned_cols=260 Identities=22% Similarity=0.339 Sum_probs=200.0
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+++++.++||||+++++++.++...++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 357999999999999999999754 689999999875432 223457789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+ .++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 157 (303)
T cd07869 84 YV-HTDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS- 157 (303)
T ss_pred CC-CcCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence 99 46888888764 35688999999999999999999999 99999999999999999999999999997643222
Q ss_pred ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc-CCCc-c---
Q 045553 958 HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ-GRPC-E--- 1031 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--- 1031 (1082)
.......|++.|+|||++.+ ..++.++||||+||++|||++|+.||.... +........... +... .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMK-------DIQDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCc-------cHHHHHHHHHHHhCCCChhhcc
Confidence 22234568999999999865 457889999999999999999999997421 111111111110 0000 0
Q ss_pred ------cccc-ccCCCCCh---------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1032 ------FFTA-GLWDCGPH---------DDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1032 ------~~d~-~l~~~~~~---------~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.+++ ......+. .....+.+++.+|++.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 231 GVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred chhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000 00000000 12346789999999999999999999986
No 110
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2e-34 Score=315.05 Aligned_cols=251 Identities=27% Similarity=0.443 Sum_probs=209.3
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|++.+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+|++++++++.+....++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 356888999999999999999765 88999999976644 5678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.++++......+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 999999999876555799999999999999999999999 999999999999999999999999999987632221
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
...++..|+|||++.+..++.++||||||+++|||++ |..||.... ... +......+...
T Consensus 158 --~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~-~~~~~~~~~~~-------- 218 (256)
T cd05039 158 --SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKD-VVPHVEKGYRM-------- 218 (256)
T ss_pred --cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC--------HHH-HHHHHhcCCCC--------
Confidence 2335678999999998889999999999999999997 988886321 111 11222222111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
..+...+..+.+++.+|++.+|++||++.|++++|+.+
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 219 -EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 11223456889999999999999999999999999864
No 111
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.7e-34 Score=321.72 Aligned_cols=258 Identities=24% Similarity=0.402 Sum_probs=206.8
Q ss_pred CccccceecccCceEEEEEEEc------CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
+|++.+.||+|+||.||+|... ....+|+|.+..... ...+++.+|+++++.++||||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999643 235789988865432 335678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCC
Q 045553 875 IYNYLPGGNLEKFIQDRP----------------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSN 932 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 932 (1082)
||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 999999999999986531 23578999999999999999999999 99999999999
Q ss_pred EEEcCCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCC
Q 045553 933 ILLDNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSF 1010 (1082)
Q Consensus 933 ill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~ 1010 (1082)
|++++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--- 234 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--- 234 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC---
Confidence 99999999999999999865433221 1222345678999999998899999999999999999998 988886321
Q ss_pred CCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1011 GNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
...+.. ....+. ....+...+.++.+++.+|++.+|++||++.|+++.|+++..+
T Consensus 235 -----~~~~~~-~~~~~~---------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 235 -----PERLFN-LLKTGY---------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred -----HHHHHH-HHhCCC---------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 122222 122111 1112234456899999999999999999999999999987653
No 112
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.3e-34 Score=319.64 Aligned_cols=252 Identities=23% Similarity=0.297 Sum_probs=204.3
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
+|++.++||+|+||+||+|.. .+++.||+|++..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 478889999999999999965 4689999999865322 223457789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++|+|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 99999999998765455789999999999999999999999 999999999999999999999999999987643222
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
.....|+..|+|||++.+..++.++||||+||++|||++|+.||.... .......+...+....
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~--------- 221 (285)
T cd05605 158 --IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK-----EKVKREEVERRVKEDQ--------- 221 (285)
T ss_pred --cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCc-----hhhHHHHHHHHhhhcc---------
Confidence 223468999999999999899999999999999999999999997421 1111111122111111
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
...+...+..+.+++.+|++.||++|| ++.++.++
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 -EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred -cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 112334556789999999999999999 78888654
No 113
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.7e-34 Score=314.67 Aligned_cols=248 Identities=25% Similarity=0.335 Sum_probs=198.5
Q ss_pred ceecccCceEEEEEEE-cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 807 NCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4699999999999965 468999999876443 23456789999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc-cCc
Q 045553 885 EKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT-TDV 963 (1082)
Q Consensus 885 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~-~~~ 963 (1082)
.++++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|++|||++........... ...
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 81 LTFLRTE-GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 9999764 34689999999999999999999999 999999999999999999999999999876532211111 111
Q ss_pred ccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCC
Q 045553 964 AGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGP 1042 (1082)
Q Consensus 964 ~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 1042 (1082)
.++..|+|||.+.++.++.++||||||+++|||++ |..||.... .... ........ ....+
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~--------~~~~-~~~~~~~~---------~~~~~ 218 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS--------NQQT-REAIEQGV---------RLPCP 218 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC--------HHHH-HHHHHcCC---------CCCCc
Confidence 23457999999999899999999999999999998 888875321 1111 11111111 11122
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1043 HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1043 ~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
...+..+.+++.+|++.+|++||++.||.++|+.
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 219 ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 3445689999999999999999999999999863
No 114
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.4e-34 Score=314.35 Aligned_cols=259 Identities=25% Similarity=0.414 Sum_probs=212.7
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57999999999999999999765 78999999886432 233567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 877 NYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||+++++|.+++... ....+++..+..++.+++.|++|||+. +|+||||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998753 245689999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
.... .....++..|+|||+..+..++.++|||||||++|+|++|+.||... .....++...... +...
T Consensus 159 ~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~-~~~~---- 226 (267)
T cd08224 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD------KMNLYSLCKKIEK-CDYP---- 226 (267)
T ss_pred CCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC------CccHHHHHhhhhc-CCCC----
Confidence 3221 22346888999999999888999999999999999999999998632 1222333222211 1111
Q ss_pred cccCCCCC-hHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1035 AGLWDCGP-HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1035 ~~l~~~~~-~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..+ ......+.+++.+|++.+|++||++.+|+++|+++.+
T Consensus 227 -----~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~~ 267 (267)
T cd08224 227 -----PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMHA 267 (267)
T ss_pred -----CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhcC
Confidence 111 2445688999999999999999999999999998753
No 115
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.5e-34 Score=328.12 Aligned_cols=260 Identities=22% Similarity=0.351 Sum_probs=196.9
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccC-----CeEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE-----AEMF 873 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~ 873 (1082)
+|++.++||+|+||.||+|.. .++..||||++... .......+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 488899999999999999964 46899999998643 223345688999999999999999999987543 3579
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+ +++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 999999 57999998764 4689999999999999999999999 99999999999999999999999999998653
Q ss_pred CCCC--ccccCcccCCCcccchhccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH-----
Q 045553 954 TSET--HATTDVAGTFGYVAPEYAMT--CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL----- 1024 (1082)
Q Consensus 954 ~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----- 1024 (1082)
.... .......|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+....
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~-----~~~~~~~~~~~~~~~~ 229 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV-----VHQLDLITDLLGTPSP 229 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh-----HHHHHHHHHHhCCCCH
Confidence 2221 12234579999999999876 6789999999999999999999999964211 01111111100
Q ss_pred ------hcCCCccccccccCCCC-------ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1025 ------LQGRPCEFFTAGLWDCG-------PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1025 ------~~~~~~~~~d~~l~~~~-------~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
......+.++. +.... -......+.+++.+|++.+|++||++.|++++
T Consensus 230 ~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 230 ETISRVRNEKARRYLSS-MRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHhhhhhHHHHHHh-hcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000000000 00000 01224567899999999999999999999865
No 116
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=5.2e-34 Score=311.64 Aligned_cols=250 Identities=24% Similarity=0.391 Sum_probs=208.0
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|.+.+.||+|++|.||+|... +++.|++|.+... .....+.+.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778899999999999999654 6899999998653 234567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.++++......+++..++.++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||+++........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~ 157 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF 157 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence 9999999999886567899999999999999999999999 9999999999999999999999999999876543322
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....|++.|+|||+..+..++.++||||||+++|||++|+.||.... ....... ...+...
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~-~~~~~~~-------- 219 (256)
T cd08529 158 -ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN--------QGALILK-IIRGVFP-------- 219 (256)
T ss_pred -hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHH-HHcCCCC--------
Confidence 233468899999999999999999999999999999999999996321 1111122 1222111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+|++.+|++||++.+++++
T Consensus 220 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 -PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1122345679999999999999999999999864
No 117
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.1e-35 Score=334.17 Aligned_cols=252 Identities=23% Similarity=0.324 Sum_probs=206.2
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36899999999999999999655 68999999997542 234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999874 5789999999999999999999998 99999999999999999999999999998765433
Q ss_pred ----------------------------CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCcc
Q 045553 957 ----------------------------THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFC 1008 (1082)
Q Consensus 957 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~ 1008 (1082)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~- 234 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT- 234 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC-
Confidence 112234569999999999999999999999999999999999999997432
Q ss_pred CCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCC-HHHHHHH
Q 045553 1009 SFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS-MRQVAQQ 1073 (1082)
Q Consensus 1009 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt-~~ev~~~ 1073 (1082)
............... .-......+.++.+++.+|+. +|++||+ +.|++++
T Consensus 235 -------~~~~~~~i~~~~~~~-------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 235 -------LQETYNKIINWKESL-------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred -------HHHHHHHHhccCCcc-------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 112222222110000 000111235688999999997 9999999 9999875
No 118
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=5e-34 Score=319.50 Aligned_cols=258 Identities=22% Similarity=0.382 Sum_probs=208.2
Q ss_pred hcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 871 (1082)
.++|.+.+.||+|+||.||+|... ++..||||+++... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 346899999999999999999632 35689999987543 23346788999999999 79999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.++||||+++|+|.++++......+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++++|||+++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccccc
Confidence 99999999999999999875445589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 952 LGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 952 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
....... ......++..|+|||++.+..++.++||||+||++|||++ |+.||..... ..-.......+..
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~ 262 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV--------DSKFYKLIKEGYR 262 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc--------hHHHHHHHHcCCc
Confidence 6433221 1222346778999999999999999999999999999998 8998863211 1111122222211
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1030 CEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1030 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
. ..+...+.++.+++.+|++.+|++||++.||++.|+++
T Consensus 263 ~---------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 263 M---------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred C---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1 11223346799999999999999999999999999875
No 119
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.1e-34 Score=312.92 Aligned_cols=255 Identities=27% Similarity=0.425 Sum_probs=207.0
Q ss_pred cCccccceecccCceEEEEEEEc-CC---eEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PG---VVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.+|+..+.||+|+||.||+|... ++ ..+|+|.+.... ....+.+..|++++++++|||++++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46788899999999999999754 23 379999986542 33456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 85 TEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 9999999999999765 35689999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCcccc--CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 956 ETHATT--DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 956 ~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
...... ....+..|+|||++.+..++.++|||||||++|||++ |+.||.... ..++..........
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~--------~~~~~~~i~~~~~~--- 229 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS--------NHEVMKAINDGFRL--- 229 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC--------HHHHHHHHhcCCCC---
Confidence 222111 1223457999999998899999999999999999997 999986321 12333333221111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
..+...+..+.+++.+|++.+|++||++.+|++.|+++
T Consensus 230 -------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 -------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11223456789999999999999999999999999886
No 120
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.3e-34 Score=332.50 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=203.2
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 4567999999999999999999765 57899999986422 2234567899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 99999999999999753 578899999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccCcccCCCcccchhcccC----CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTC----RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
..........||+.|+|||++.+. .++.++||||+||++|||++|+.||... +...............
T Consensus 195 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~--------~~~~~~~~i~~~~~~~ 266 (370)
T cd05621 195 TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD--------SLVGTYSKIMDHKNSL 266 (370)
T ss_pred CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCCccc
Confidence 333333456799999999998754 3788999999999999999999999632 2222223332221111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSS--RPSMRQVAQQ 1073 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~ev~~~ 1073 (1082)
.. ......+..+.+++.+|+..++.+ ||++.|++++
T Consensus 267 ~~-------p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 267 NF-------PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CC-------CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 11 011133567888999999866554 8999999876
No 121
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-34 Score=305.73 Aligned_cols=265 Identities=23% Similarity=0.365 Sum_probs=205.6
Q ss_pred CccccceecccCceEEEEEE-EcCCeEEEEEEeecCccc--cHHHHHHHHHHHhccCCCc-eeeEeeeeccCC------e
Q 045553 802 GFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQ--GVQQFAAEIRTLGRVQHPN-LVTLIGYHVSEA------E 871 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~------~ 871 (1082)
.|+..++||+|+||+||+|+ ..+|+.||+|++...... ......+|+.++++++|+| |+++.+++.... .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 46666789999999999995 557899999999766442 2345689999999999999 999999998877 7
Q ss_pred EEEEEeecCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPR--RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
.++||||+ ..+|..++...+. ..++...+..++.||++|++|+|++ +|+||||||+||+++++|.+||+|||+|
T Consensus 92 l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchH
Confidence 89999999 6799999998753 4677789999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC-
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG- 1027 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 1027 (1082)
+.+..+.. ..+.-++|..|+|||++.+. .|+...||||+||++.||++++.-|..... ..+..+....-|
T Consensus 168 ra~~ip~~-~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-------~~ql~~If~~lGt 239 (323)
T KOG0594|consen 168 RAFSIPMR-TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-------IDQLFRIFRLLGT 239 (323)
T ss_pred HHhcCCcc-cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-------HHHHHHHHHHcCC
Confidence 97653332 24445789999999999886 789999999999999999999988864321 222222211111
Q ss_pred -----CCccccccc----cCCCC-Ch-------HHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhhhC
Q 045553 1028 -----RPCEFFTAG----LWDCG-PH-------DDLIEMLNLAIMCTGESLSSRPSMRQVAQQ--LKQIQ 1078 (1082)
Q Consensus 1028 -----~~~~~~d~~----l~~~~-~~-------~~~~~l~~li~~cl~~~p~~RPt~~ev~~~--L~~i~ 1078 (1082)
|.....-+. ..... +. .-.....+++.+|++++|.+|.++++++++ +..+.
T Consensus 240 P~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 240 PNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred CCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 111110011 11111 11 111468899999999999999999999987 55543
No 122
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.9e-34 Score=319.52 Aligned_cols=255 Identities=22% Similarity=0.377 Sum_probs=206.8
Q ss_pred cCccccceecccCceEEEEEEEc------CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.+|.+.++||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 35778899999999999999532 367899999876666667789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcE
Q 045553 875 IYNYLPGGNLEKFIQDRPR-------------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNA 941 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 941 (1082)
||||+++++|.++++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999999986432 3588999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHH
Q 045553 942 YLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAW 1019 (1082)
Q Consensus 942 kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~ 1019 (1082)
||+|||++......... ......+++.|+|||+..+..++.++|||||||++|||++ |+.||..... ...
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~ 233 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--------TEA 233 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH--------HHH
Confidence 99999999765433221 1222345678999999999999999999999999999998 8888853211 111
Q ss_pred HHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1020 ASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1020 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
.... ..+... ..+...+..+.+++.+||+.+|++||++.||++.|++
T Consensus 234 ~~~~-~~~~~~---------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 IECI-TQGREL---------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHH-HcCccC---------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 2221 111111 1122344678999999999999999999999999864
No 123
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.4e-34 Score=322.00 Aligned_cols=259 Identities=25% Similarity=0.416 Sum_probs=208.2
Q ss_pred cCccccceecccCceEEEEEEEc--------CCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII--------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 870 (1082)
++|.+.+.||+|+||.||+|... ++..||+|.+.... .....++.+|+++++.+ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56899999999999999999642 23579999987542 23456788899999999 7999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD 936 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 936 (1082)
..++||||+++|+|.+++.... ...+++.++.+++.|++.|++|||+. +++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 9999999999999999998642 23588999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCCcc-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCc
Q 045553 937 NNLNAYLSDFGLARLLGTSETHA-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGF 1014 (1082)
Q Consensus 937 ~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~ 1014 (1082)
.++.+||+|||.++......... .....++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~-------- 246 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-------- 246 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC--------
Confidence 99999999999997654322111 112234568999999999899999999999999999998 77887532
Q ss_pred cHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1015 NIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
...+.... ...+... ..+.....++.+++.+|++.+|++||+|.||++.|+++.+.
T Consensus 247 ~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 247 PVEELFKL-LKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred CHHHHHHH-HHcCCCC---------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 22222222 2222111 12234456889999999999999999999999999988654
No 124
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.3e-34 Score=318.48 Aligned_cols=257 Identities=24% Similarity=0.358 Sum_probs=205.1
Q ss_pred HhcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
.+++|++.+.||+|+||.||+|... .+..||+|.+..... .....|.+|+.++++++|+||+++++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3467899999999999999999764 357899998865432 334568999999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC---cEEE
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPR-----RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL---NAYL 943 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl 943 (1082)
.++||||+++++|.++++.... ..+++..+.+++.||+.|++|||+. +++||||||+||+++.++ .+|+
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976531 3589999999999999999999999 999999999999998654 5999
Q ss_pred eecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHH
Q 045553 944 SDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWAS 1021 (1082)
Q Consensus 944 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 1021 (1082)
+|||+++........ .......+..|+|||++.+..++.++|||||||++|||++ |..||.... ......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~--------~~~~~~ 232 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT--------NQEVME 232 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHH
Confidence 999999876322211 1112234568999999999999999999999999999997 888886321 122222
Q ss_pred HHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1022 MLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1022 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
....... ...+...+..+.+++.+|++.+|++||++.+|+++|..
T Consensus 233 ~~~~~~~----------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 233 FVTGGGR----------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHcCCc----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 2221111 11233445688999999999999999999999999863
No 125
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.2e-34 Score=325.46 Aligned_cols=242 Identities=26% Similarity=0.370 Sum_probs=197.4
Q ss_pred ceecccCceEEEEEEE----cCCeEEEEEEeecCc----cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 807 NCIGSGGFGATYKAEI----IPGVVVAVKRLSVGR----FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+.||+|+||.||+|+. .+++.||+|++.... ......+.+|+++++.++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999964 357899999987532 22345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++... ..+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (323)
T cd05584 82 LSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT- 155 (323)
T ss_pred CCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC-
Confidence 9999999999764 4678889999999999999999999 999999999999999999999999999875432222
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
......|++.|+|||++.+..++.++|||||||++|||++|+.||... .....+..... +..
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~--------~~~~~~~~~~~-~~~--------- 217 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE--------NRKKTIDKILK-GKL--------- 217 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCC--------CHHHHHHHHHc-CCC---------
Confidence 223457999999999999988999999999999999999999999642 12222222222 111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
..+......+.+++.+|++.+|++|| ++.++.++
T Consensus 218 -~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 218 -NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred -CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 12233456789999999999999999 78877653
No 126
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7.1e-34 Score=313.83 Aligned_cols=254 Identities=22% Similarity=0.409 Sum_probs=203.9
Q ss_pred ccccceecccCceEEEEEEEcC----CeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCe-----
Q 045553 803 FNVQNCIGSGGFGATYKAEIIP----GVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE----- 871 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 871 (1082)
|++.+.||+|+||.||+|.... +..||+|+++... ......+.+|++.++.++|||++++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999997542 3789999987543 2345678999999999999999999998876554
Q ss_pred -EEEEEeecCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeec
Q 045553 872 -MFLIYNYLPGGNLEKFIQDRP----RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDF 946 (1082)
Q Consensus 872 -~~lV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 946 (1082)
.++||||+++++|..++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 799999999999999986532 34689999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcc-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 947 GLARLLGTSETHA-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 947 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
|+++.+....... .....++..|+|||++.+..++.++||||||+++|||++ |..||.... ..+......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~--------~~~~~~~~~ 229 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE--------NHEIYDYLR 229 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHH
Confidence 9998765433221 112335678999999988899999999999999999999 888875321 122222222
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
.+... ..+...+.++.+++.+|++.+|++||++.||++.|+++
T Consensus 230 -~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 -HGNRL---------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -cCCCC---------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 22111 12334556899999999999999999999999999876
No 127
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.3e-34 Score=323.32 Aligned_cols=259 Identities=26% Similarity=0.450 Sum_probs=208.9
Q ss_pred HhcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 870 (1082)
..++|++.+.||+|+||.||+|... ....+|+|.+.... .....++.+|+++++++ +|+||+++++++...+
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 3456889999999999999999654 23689999987542 23345688999999999 8999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc
Q 045553 871 EMFLIYNYLPGGNLEKFIQDR--------------PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD 936 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 936 (1082)
..++||||+++|+|.++++.. ....+++..+.+++.|++.|++|||+. +|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEc
Confidence 999999999999999999753 245689999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCc
Q 045553 937 NNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGF 1014 (1082)
Q Consensus 937 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~ 1014 (1082)
.++.+|++|||.++.+...... ......++..|+|||+..+..++.++|||||||++||+++ |..||...
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-------- 238 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-------- 238 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC--------
Confidence 9999999999999876543321 1222345678999999999899999999999999999997 88887532
Q ss_pred cHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1015 NIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...+.... ...+... ..+......+.+++.+|++.+|++|||+.|+++.|+.+.
T Consensus 239 ~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 239 PVEELFKL-LKEGYRM---------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CHHHHHHH-HHcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11222222 1121111 123344568999999999999999999999999999874
No 128
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=7.3e-34 Score=310.51 Aligned_cols=249 Identities=27% Similarity=0.445 Sum_probs=204.8
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeec-cCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHV-SEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lV~E~~ 879 (1082)
.+|++.+.||+|+||.||+|... |..||+|.+.... ..+.+.+|+.++++++|+|++++++++. .....++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888999999999999999765 8889999986442 3467899999999999999999999754 556789999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.++++......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 999999999876556689999999999999999999999 99999999999999999999999999987653322
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
....++..|+|||++.+..++.++||||||+++|||++ |+.||.. ....+..... ..+...
T Consensus 157 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~--------~~~~~~~~~~-~~~~~~-------- 218 (256)
T cd05082 157 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR--------IPLKDVVPRV-EKGYKM-------- 218 (256)
T ss_pred -CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCC--------CCHHHHHHHH-hcCCCC--------
Confidence 22345678999999999899999999999999999997 8888752 1223332222 112111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
..+...+..+.+++.+|++.+|++||++.++++.|+++
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 219 -DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 11234456899999999999999999999999999864
No 129
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.3e-34 Score=333.74 Aligned_cols=252 Identities=24% Similarity=0.325 Sum_probs=201.5
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36889999999999999999654 68999999997532 233456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..+....
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 999999999999864 4689999999999999999999999 99999999999999999999999999987653211
Q ss_pred Cc-------------------------------------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhC
Q 045553 957 TH-------------------------------------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISD 999 (1082)
Q Consensus 957 ~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg 999 (1082)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 00 01124699999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 045553 1000 KKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS---MRQVAQQ 1073 (1082)
Q Consensus 1000 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt---~~ev~~~ 1073 (1082)
..||.... ..+.............. ......+..+.+++.+|+. +|.+|++ +.|++++
T Consensus 236 ~~Pf~~~~--------~~~~~~~i~~~~~~~~~-------~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 236 YPPFCSDN--------PQETYRKIINWKETLQF-------PDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCC--------HHHHHHHHHcCCCccCC-------CCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 99996321 22222222211111100 0111234578889999996 8999997 8888763
No 130
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.9e-34 Score=329.95 Aligned_cols=253 Identities=23% Similarity=0.308 Sum_probs=197.0
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||+||+|.. .+++.||+|++.... ......+.+|+.++++++|+||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 3688999999999999999964 458999999997532 223456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999999864 4689999999999999999999999 99999999999999999999999999987543211
Q ss_pred C----------------------------------ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCC
Q 045553 957 T----------------------------------HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKA 1002 (1082)
Q Consensus 957 ~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p 1002 (1082)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0 011235799999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHccc--CCCCCCCCHHHHHHH
Q 045553 1003 LDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTG--ESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1003 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~--~~p~~RPt~~ev~~~ 1073 (1082)
|.... ................ +.+ ......++.+++.+++. .++..||++.||+++
T Consensus 236 f~~~~--------~~~~~~~i~~~~~~~~-~p~------~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 236 FCSET--------PQETYKKVMNWKETLI-FPP------EVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCC--------HHHHHHHHHcCcCccc-CCC------cCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 96321 1222222221111110 000 01123456667766443 334457999999876
No 131
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.3e-34 Score=321.77 Aligned_cols=256 Identities=28% Similarity=0.409 Sum_probs=203.7
Q ss_pred cCccccceecccCceEEEEEEEcC-C--eEEEEEEeecC-ccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIP-G--VVVAVKRLSVG-RFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~-~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 875 (1082)
++|++.+.||+|+||.||+|...+ + ..+++|.++.. .....+.+.+|+++++++ +||||+++++++......++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578999999999999999997643 3 35788887643 233456788999999999 799999999999999999999
Q ss_pred EeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcE
Q 045553 876 YNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNA 941 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 941 (1082)
|||+++++|.++++... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 99999999999997642 13588999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHH
Q 045553 942 YLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWA 1020 (1082)
Q Consensus 942 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1020 (1082)
||+|||++....... .......+..|+|||+..+..++.++|||||||++|||++ |..||... ...+..
T Consensus 159 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~--------~~~~~~ 228 (297)
T cd05089 159 KIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGM--------TCAELY 228 (297)
T ss_pred EECCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--------CHHHHH
Confidence 999999986432111 1111223567999999998899999999999999999997 99998632 122222
Q ss_pred HHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1021 SMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1021 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.... .+. ....+...+..+.+++.+|++.+|.+||++.++++.|+++..
T Consensus 229 ~~~~-~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 229 EKLP-QGY---------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred HHHh-cCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2221 111 111223345678999999999999999999999999987643
No 132
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3e-34 Score=313.78 Aligned_cols=245 Identities=27% Similarity=0.389 Sum_probs=198.6
Q ss_pred eecccCceEEEEEEE---cCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 808 CIGSGGFGATYKAEI---IPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 808 ~lg~G~~g~Vy~a~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
.||+|+||.||+|.+ .++..||+|+++.... ...+++.+|+.+++.++||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999964 3578999999865432 34567899999999999999999999875 45678999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc--c
Q 045553 883 NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA--T 960 (1082)
Q Consensus 883 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~--~ 960 (1082)
+|.+++... ..+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......... .
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 999999763 4689999999999999999999999 99999999999999999999999999998765433221 1
Q ss_pred cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 961 TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....++..|+|||.+....++.++|||||||++|||++ |+.||.... ...+... +..+...
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~-i~~~~~~--------- 217 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK--------GNEVTQM-IESGERM--------- 217 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHH-HHCCCCC---------
Confidence 22334678999999988889999999999999999998 999986321 1222222 2222211
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
..+...+.++.+++.+|++.+|++||++.+|++.|++
T Consensus 218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 1223455688999999999999999999999999986
No 133
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.5e-34 Score=315.18 Aligned_cols=259 Identities=25% Similarity=0.414 Sum_probs=210.8
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|.. .+++.||||.+.... .....++.+|+++++.++|||++++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688899999999999999964 578999999886532 233467889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 877 NYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||+++++|.+++... ....+++..++.++.|++.|++|||+. +++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999998742 234689999999999999999999999 999999999999999999999999999886643
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
... ......|+..|+|||++.+..++.++||||||+++|||++|..||... ......+.+...... .
T Consensus 159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~-~----- 225 (267)
T cd08229 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD------KMNLYSLCKKIEQCD-Y----- 225 (267)
T ss_pred CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc------cchHHHHhhhhhcCC-C-----
Confidence 322 123346889999999999888999999999999999999999998632 112222222221111 0
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
+. ..+......+.+++.+|++.+|++||||.+|+++++++.
T Consensus 226 ~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 226 PP---LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CC---CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 00 112235568999999999999999999999999998864
No 134
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6e-34 Score=328.36 Aligned_cols=259 Identities=21% Similarity=0.349 Sum_probs=207.4
Q ss_pred hcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccC-CCceeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 871 (1082)
..+|.+.+.||+|+||.||+|.+. .+..||||++..... ...+.+.+|++++.++. ||||+++++++...+.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 345778899999999999999753 246899999975533 23457889999999997 9999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCC----------------------------------------------------------
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPR---------------------------------------------------------- 893 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~---------------------------------------------------------- 893 (1082)
.++||||+++|+|.++++....
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 9999999999999999975321
Q ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE
Q 045553 894 --------------------------------------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL 935 (1082)
Q Consensus 894 --------------------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 935 (1082)
..+++..+.+++.|++.|++|||+. +|+||||||+||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEE
Confidence 2467788899999999999999998 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCC
Q 045553 936 DNNLNAYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNG 1013 (1082)
Q Consensus 936 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~ 1013 (1082)
++++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~------ 346 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP------ 346 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC------
Confidence 9999999999999986533221 12223457889999999998889999999999999999998 888885321
Q ss_pred ccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1014 FNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+.....+..+... ..+.....++.+++.+||+.+|++||+++||++.|+++.
T Consensus 347 --~~~~~~~~~~~~~~~---------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 347 --MNEQFYNAIKRGYRM---------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred --chHHHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111122222222111 123344568999999999999999999999999999864
No 135
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.6e-34 Score=332.51 Aligned_cols=252 Identities=21% Similarity=0.291 Sum_probs=197.8
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.|++.+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578889999999999999954 468899999997542 2335678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999999999764 4688999999999999999999999 999999999999999999999999999764311000
Q ss_pred ----------------------------------------------ccccCcccCCCcccchhcccCCCCchhhHHHHHH
Q 045553 958 ----------------------------------------------HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGV 991 (1082)
Q Consensus 958 ----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv 991 (1082)
.......||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 0012357999999999999989999999999999
Q ss_pred HHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHH--cccCCCCCCCCHHH
Q 045553 992 VLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIM--CTGESLSSRPSMRQ 1069 (1082)
Q Consensus 992 ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~--cl~~~p~~RPt~~e 1069 (1082)
++|||++|+.||..... ................ ........++.+++.+ |...+|..||++.|
T Consensus 237 il~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~~~-------~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 237 ILFEMLVGQPPFLAPTP--------TETQLKVINWENTLHI-------PPQVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred HHHHHHhCCCCCcCCCH--------HHHHHHHHccccccCC-------CCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 99999999999974211 1111111111111100 0111234567778877 55666667999999
Q ss_pred HHHH
Q 045553 1070 VAQQ 1073 (1082)
Q Consensus 1070 v~~~ 1073 (1082)
++++
T Consensus 302 ~l~h 305 (381)
T cd05626 302 IKAH 305 (381)
T ss_pred HhcC
Confidence 9875
No 136
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8.9e-34 Score=309.88 Aligned_cols=252 Identities=26% Similarity=0.437 Sum_probs=205.8
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
.+|++.+.||+|+||.||+|.+.++..+|+|.+.... ....+|.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 3678889999999999999988778899999886543 335678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+++|.++++.. ...++++.+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.++..........
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 83 HGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred CCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence 99999999865 24578999999999999999999999 999999999999999999999999999986643322222
Q ss_pred cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 961 TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....++.+|+|||+..++.++.++||||+|+++|||++ |+.||.... ........ ..+. ....
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~-~~~~--~~~~----- 222 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS--------NSEVVETI-NAGF--RLYK----- 222 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHH-hCCC--CCCC-----
Confidence 23345678999999998899999999999999999998 888886321 12222222 1111 1111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
+...+..+.+++.+|++.+|++||++.||+++|.
T Consensus 223 --~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 223 --PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred --CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1223467999999999999999999999999873
No 137
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.9e-34 Score=324.85 Aligned_cols=244 Identities=23% Similarity=0.320 Sum_probs=196.3
Q ss_pred ccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHH---hccCCCceeeEeeeeccCCeEEEE
Q 045553 803 FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTL---GRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
|++.+.||+|+||.||+|... +++.||||+++... ....+.+.+|.+++ +.++||||+++++++.+.+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 677899999999999999654 68999999997542 22344566666554 567899999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|..+++. ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999988864 3689999999999999999999999 9999999999999999999999999998753222
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
. .......|++.|+|||++.+..++.++|||||||++|||++|+.||... ...+..........
T Consensus 155 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~--------~~~~~~~~i~~~~~------- 218 (324)
T cd05589 155 G-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD--------DEEEVFDSIVNDEV------- 218 (324)
T ss_pred C-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCCC-------
Confidence 1 2234467999999999999999999999999999999999999999632 12222222222111
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQ 1072 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~ 1072 (1082)
..+...+..+.+++.+|++.||++|| ++.++++
T Consensus 219 ----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 ----RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 12233456788999999999999999 4666655
No 138
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.1e-33 Score=308.99 Aligned_cols=246 Identities=25% Similarity=0.402 Sum_probs=198.3
Q ss_pred ecccCceEEEEEEEc---CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 809 IGSGGFGATYKAEII---PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 809 lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
||+|+||.||+|.+. ++..||+|++..... ...+.+.+|+.++++++||||+++++++. ....++||||+++++|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 899999999999653 356799999875532 33467899999999999999999999875 4578999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc--ccC
Q 045553 885 EKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA--TTD 962 (1082)
Q Consensus 885 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~--~~~ 962 (1082)
.+++... ...+++..+.+++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.......... ...
T Consensus 82 ~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 82 NKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 9999754 35689999999999999999999999 99999999999999999999999999998654333221 112
Q ss_pred cccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 963 VAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 963 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
..++..|+|||.+.+..++.++||||||+++||+++ |+.||... ....+.. .+..+... ..
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--------~~~~~~~-~~~~~~~~---------~~ 219 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKM--------KGPEVMS-FIEQGKRL---------DC 219 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcC--------CHHHHHH-HHHCCCCC---------CC
Confidence 233578999999998889999999999999999996 99998632 1122222 22222111 12
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
+...+.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 220 ~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 220 PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 334457889999999999999999999999999875
No 139
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.1e-34 Score=319.03 Aligned_cols=259 Identities=25% Similarity=0.427 Sum_probs=209.5
Q ss_pred hcCccccceecccCceEEEEEEEc--------CCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccC
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII--------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSE 869 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 869 (1082)
..+|.+.+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456888999999999999999631 24579999986442 34456789999999999 899999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL 935 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 935 (1082)
...++||||+++++|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 99999999999999999998642 23578899999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCCcc-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCC
Q 045553 936 DNNLNAYLSDFGLARLLGTSETHA-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNG 1013 (1082)
Q Consensus 936 ~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~ 1013 (1082)
+.++.+||+|||.++.+....... .....++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~------- 243 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------- 243 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-------
Confidence 999999999999998765433221 222345678999999999899999999999999999998 77777522
Q ss_pred ccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1014 FNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
...++.... ..+... ..+...+..+.+++.+||+.+|++||+|.||++.|+++..
T Consensus 244 -~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 244 -PVEELFKLL-KEGHRM---------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred -CHHHHHHHH-HcCCcC---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 233333332 222111 1123445689999999999999999999999999998754
No 140
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.7e-34 Score=322.46 Aligned_cols=240 Identities=24% Similarity=0.334 Sum_probs=192.8
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhc-cCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGR-VQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999754 57899999987542 2233445566666664 4899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~ 154 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAS 154 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cccc
Confidence 9999999764 4689999999999999999999999 99999999999999999999999999998653322 2233
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+......... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~--------~~~~~~~~i~~~~-----------~~~ 215 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE--------DEDELFDSILNDR-----------PHF 215 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHcCC-----------CCC
Confidence 457999999999999989999999999999999999999999632 1122222221111 112
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMR-QVA 1071 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~-ev~ 1071 (1082)
+.....++.+++.+|++.+|++||++. ++.
T Consensus 216 ~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 216 PRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 333456788999999999999999876 443
No 141
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-34 Score=302.97 Aligned_cols=251 Identities=24% Similarity=0.311 Sum_probs=208.5
Q ss_pred CccccceecccCceEEEEEEEcC-CeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIP-GVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.|+..+.||+|.-|+||+++..+ +..+|+|++..... ....+.+.|-++|+.+.||.++.+++.++.++..|+|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 47778899999999999998764 58999999976533 344567789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC---
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT--- 954 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~--- 954 (1082)
||+||+|....+.++.+.+++..++.++.+++-||+|||.. |||+|||||+||||.++|++-++||.++.....
T Consensus 158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt 234 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPT 234 (459)
T ss_pred cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCCCe
Confidence 99999999999999999999999999999999999999999 999999999999999999999999999754311
Q ss_pred ------------------------------CCC----------------------ccccCcccCCCcccchhcccCCCCc
Q 045553 955 ------------------------------SET----------------------HATTDVAGTFGYVAPEYAMTCRVSD 982 (1082)
Q Consensus 955 ------------------------------~~~----------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 982 (1082)
... .....++||..|+|||++.+...+.
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs 314 (459)
T KOG0610|consen 235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS 314 (459)
T ss_pred eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence 000 0122467999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCC
Q 045553 983 KADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLS 1062 (1082)
Q Consensus 983 ~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~ 1062 (1082)
+.|+|+|||++|||+.|+.||.... -.+....++.+. +.=......+..+.+||++.+.+||.
T Consensus 315 AVDWWtfGIflYEmLyG~TPFKG~~--------~~~Tl~NIv~~~---------l~Fp~~~~vs~~akDLIr~LLvKdP~ 377 (459)
T KOG0610|consen 315 AVDWWTFGIFLYEMLYGTTPFKGSN--------NKETLRNIVGQP---------LKFPEEPEVSSAAKDLIRKLLVKDPS 377 (459)
T ss_pred hhhHHHHHHHHHHHHhCCCCcCCCC--------chhhHHHHhcCC---------CcCCCCCcchhHHHHHHHHHhccChh
Confidence 9999999999999999999997532 223333333322 11111224567899999999999999
Q ss_pred CCCC----HHHHHH
Q 045553 1063 SRPS----MRQVAQ 1072 (1082)
Q Consensus 1063 ~RPt----~~ev~~ 1072 (1082)
+|-. +.||.+
T Consensus 378 kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 378 KRLGSKRGAAEIKR 391 (459)
T ss_pred hhhccccchHHhhc
Confidence 9997 667654
No 142
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.1e-33 Score=312.02 Aligned_cols=254 Identities=24% Similarity=0.386 Sum_probs=200.3
Q ss_pred ccccceecccCceEEEEEEEcCC---eEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccC------Ce
Q 045553 803 FNVQNCIGSGGFGATYKAEIIPG---VVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------AE 871 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~~~---~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 871 (1082)
|.+.+.||+|+||.||+|..... ..||+|.++.. .....+.+.+|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 35678899999999999976543 36899988654 234456788999999999999999999977432 25
Q ss_pred EEEEEeecCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecc
Q 045553 872 MFLIYNYLPGGNLEKFIQDR----PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFG 947 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 947 (1082)
.++||||+++|+|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 68999999999999988532 134589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcc-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 948 LARLLGTSETHA-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 948 la~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
+++.+....... .....+++.|+|||+..+..++.++||||||+++|||++ |+.||.... ..+... .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~~-~~~ 228 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE--------NSEIYD-YLR 228 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHH-HHH
Confidence 998765433211 122346778999999999999999999999999999999 788875321 112222 222
Q ss_pred cCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1026 QGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1026 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
.+.... .+...+..+.+++.+||+.+|++||++.||++.|+++
T Consensus 229 ~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 229 QGNRLK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred cCCCCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 222111 1223456789999999999999999999999999875
No 143
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.2e-33 Score=310.26 Aligned_cols=251 Identities=25% Similarity=0.362 Sum_probs=204.6
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc-----ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF-----QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
++|++.+.||+|++|.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4689999999999999999964 4689999999864421 224568899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 99999999999999864 4588899999999999999999999 999999999999999999999999999986643
Q ss_pred CCCccc--cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 955 SETHAT--TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 955 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
...... ....|+..|+|||++.+..++.++||||+|+++|||++|+.||.... .... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~-~~~~~~~~~~--- 225 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE-------AMAA-IFKIATQPTN--- 225 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc-------hHHH-HHHHhccCCC---
Confidence 222111 33467889999999999889999999999999999999999986321 1111 1111111111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...+......+.+++.+|++.+|++||++.|++++
T Consensus 226 ------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 ------PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ------CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11233445678999999999999999999999875
No 144
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.1e-34 Score=328.61 Aligned_cols=247 Identities=27% Similarity=0.400 Sum_probs=195.5
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
+|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++.++|+||+++++++...+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 4566789999999999999654 689999999865432 33567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+. ...++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..... .
T Consensus 155 ~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-~ 224 (353)
T PLN00034 155 DGGSLEGT------HIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-P 224 (353)
T ss_pred CCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccc-c
Confidence 99998653 2356778889999999999999999 999999999999999999999999999987643221 2
Q ss_pred ccCcccCCCcccchhccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 960 TTDVAGTFGYVAPEYAMT-----CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
.....|+..|+|||++.. ...+.++|||||||++|||++|+.||.... ............... ..
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~-~~---- 294 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR-----QGDWASLMCAICMSQ-PP---- 294 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----CccHHHHHHHHhccC-CC----
Confidence 234578999999998743 234568999999999999999999997321 111112111111111 00
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+.....++.+++.+||+.+|++||++.|++++
T Consensus 295 -----~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 295 -----EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred -----CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1123445689999999999999999999999876
No 145
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.8e-34 Score=330.02 Aligned_cols=260 Identities=23% Similarity=0.319 Sum_probs=206.5
Q ss_pred HHHHHHhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccC
Q 045553 794 ENVVRATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE 869 (1082)
Q Consensus 794 ~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 869 (1082)
.++....++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344445678999999999999999999654 57899999986422 22345578899999999999999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
...++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 9999999999999999999753 478889999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccC----CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTC----RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
+..............||+.|+|||++.+. .++.++||||+||++|||++|+.||... +..........
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~--------~~~~~~~~i~~ 261 (371)
T cd05622 190 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--------SLVGTYSKIMN 261 (371)
T ss_pred eEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC--------CHHHHHHHHHc
Confidence 87654333333456799999999998754 3788999999999999999999999732 22233333332
Q ss_pred cCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHH
Q 045553 1026 QGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSS--RPSMRQVAQQL 1074 (1082)
Q Consensus 1026 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~ev~~~L 1074 (1082)
........ .....+..+..++..|+..++.+ ||++.|+.++.
T Consensus 262 ~~~~~~~~-------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 262 HKNSLTFP-------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred CCCcccCC-------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 22111111 11234567889999999854443 78999988753
No 146
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.4e-34 Score=314.35 Aligned_cols=255 Identities=24% Similarity=0.426 Sum_probs=205.9
Q ss_pred cCccccceecccCceEEEEEEEc----CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII----PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.+|++.+.||+|+||.||+|... .+..+|+|.++... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888999999999999999653 23479999986543 23356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||++..+...
T Consensus 84 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 9999999999999865 34689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCccc--cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 956 ETHAT--TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 956 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
..... ....++..|+|||++.+..++.++||||||+++||+++ |+.||..... .+..... .++...
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--------~~~~~~~-~~~~~~-- 228 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--------QDVIKAI-EEGYRL-- 228 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH--------HHHHHHH-hCCCcC--
Confidence 32221 12223568999999999899999999999999999886 9999863211 1111111 111110
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
..+...+..+.+++.+|++.+|++||+|.++++.|+++
T Consensus 229 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 -------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 11223456789999999999999999999999999875
No 147
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.3e-34 Score=316.03 Aligned_cols=254 Identities=25% Similarity=0.381 Sum_probs=205.1
Q ss_pred CccccceecccCceEEEEEEEc------CCeEEEEEEeecCccc-cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRFQ-GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.|++.+.||+|+||.||+|... ++..||+|++...... ..+.+.+|+.+++.++||||+++++++.+....++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4777889999999999999653 2578999999755332 24568899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc
Q 045553 875 IYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN 940 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 940 (1082)
++||+++++|.+++.... ...+++..+..++.|++.|++|+|+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999986321 23588899999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHH
Q 045553 941 AYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVA 1018 (1082)
Q Consensus 941 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~ 1018 (1082)
+||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||++ |..||... ...+
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~--------~~~~ 234 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--------SNQD 234 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--------CHHH
Confidence 99999999886543322 12233446789999999988889999999999999999998 77777532 2233
Q ss_pred HHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1019 WASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1019 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
+...... +... ..+...+..+.+++.+|++.+|++||+++||++.|+.
T Consensus 235 ~~~~i~~-~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 VIEMIRN-RQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHc-CCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 3333322 2111 1233456679999999999999999999999999874
No 148
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.1e-33 Score=309.25 Aligned_cols=249 Identities=25% Similarity=0.414 Sum_probs=204.0
Q ss_pred ceecccCceEEEEEEEcC--C--eEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEIIP--G--VVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|++|.||+|.+.+ + ..||+|.+..... ...+.+.+|++.+++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999997643 2 3699999987665 566789999999999999999999999988 889999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc--c
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH--A 959 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~--~ 959 (1082)
++|.+++.......+++..++.++.|++.||+|||+. +++||||+|+||+++.++.+||+|||+++.+...... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 9999999876435789999999999999999999999 9999999999999999999999999999877543222 1
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+............
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--------~~~~~~~~~~~~~~~~-------- 220 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL--------SGSQILKKIDKEGERL-------- 220 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHHhcCCcC--------
Confidence 123457789999999999999999999999999999998 99998632 1222222222211111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
..+...+..+.+++.+|++.+|++||++.||++.|.+
T Consensus 221 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 221 -ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred -CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 1122345689999999999999999999999998863
No 149
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.7e-34 Score=326.95 Aligned_cols=242 Identities=22% Similarity=0.291 Sum_probs=197.7
Q ss_pred ceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 807 NCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999964 568999999997542 233456778999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 883 NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHD-ECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 883 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
+|..++... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~ 154 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMK 154 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-cccc
Confidence 999988763 468999999999999999999997 6 99999999999999999999999999987543222 1223
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|++.|+|||++.+..++.++|||||||++|||++|+.||... ............. . ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~--------~~~~~~~~i~~~~-~----------~~ 215 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--------DHEKLFELILMEE-I----------RF 215 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCC--------CHHHHHHHHhcCC-C----------CC
Confidence 456999999999999999999999999999999999999999632 1122222221111 0 12
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
+.....++.+++.+|++.||++|+ ++.+++++
T Consensus 216 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 216 PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 233456789999999999999996 89998764
No 150
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=8.8e-34 Score=309.70 Aligned_cols=250 Identities=26% Similarity=0.387 Sum_probs=206.8
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
+|++.+.||+|+||.||++... ++..+|+|.+.... ....+.+.+|+.+++.++|+|++++++++.+++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788899999999999999654 68999999986532 344567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++.......+++..+..++.|++.|+.|||+. +|+|+||||+||++++++.++++|||.+........ .
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~ 156 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-Y 156 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc-c
Confidence 999999998875566789999999999999999999999 999999999999999999999999999987643322 2
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
.....|+..|+|||++.+..++.++||||||+++|+|++|+.||... +........ ..+....
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~--------~~~~~~~~~-~~~~~~~-------- 219 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN--------SWKNLILKV-CQGSYKP-------- 219 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC--------CHHHHHHHH-hcCCCCC--------
Confidence 23356889999999999989999999999999999999999999632 122222222 2222111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+......+.+++.+||+.+|++||++.|++..
T Consensus 220 -~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 -LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 122344578899999999999999999999864
No 151
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1e-33 Score=313.85 Aligned_cols=259 Identities=24% Similarity=0.345 Sum_probs=209.4
Q ss_pred hcCccccceecccCceEEEEEEEcC-----CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeecc-CCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP-----GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS-EAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 872 (1082)
.++|++.+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+.++++++|+|++++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678999999999999999997665 6889999886442 3345678899999999999999999998766 5678
Q ss_pred EEEEeecCCCCHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPR------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDF 946 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 946 (1082)
++++||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 999999999999999976432 4689999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcc-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 947 GLARLLGTSETHA-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 947 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
|+++.+....... .....++..|+|||++.+..++.++||||||+++||+++ |+.||.... ..++....
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~- 232 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID--------PFEMAAYL- 232 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--------HHHHHHHH-
Confidence 9998664333221 122345778999999998899999999999999999999 999986421 12222222
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..+... ..+...+.++.+++.+||+.+|++||++.||++.|+.+..
T Consensus 233 ~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 233 KDGYRL---------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HcCCCC---------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111111 0112234578999999999999999999999999998764
No 152
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.2e-34 Score=323.86 Aligned_cols=195 Identities=26% Similarity=0.443 Sum_probs=173.8
Q ss_pred CccccceecccCceEEEEE-EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccC-C-----CceeeEeeeeccCCeEEE
Q 045553 802 GFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-H-----PNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~~~l 874 (1082)
+|.+.+.||+|+||.|-+| +..+++.||||+++... .-..+...|+.+|..++ | -|+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7899999999999999999 56679999999998664 33456678999999997 4 389999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC--CcEEEeecccceec
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN--LNAYLSDFGLARLL 952 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~--~~~kl~DfGla~~~ 952 (1082)
|+|.+ ..+|+++++.+....++...++.|+.||+.||.+||+. +|||+||||+|||+..- ..+||+|||.|...
T Consensus 266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999 67999999999888999999999999999999999999 99999999999999744 37999999999875
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDP 1005 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~ 1005 (1082)
... ...++.+..|+|||++.+.+|+.+.||||||||+.||++|.+-|..
T Consensus 342 ~q~----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 342 SQR----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred CCc----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 322 2256789999999999999999999999999999999999776654
No 153
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.8e-34 Score=313.47 Aligned_cols=254 Identities=23% Similarity=0.346 Sum_probs=203.7
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.+|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++|||++++++++..++..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4689999999999999999975 568899999997665555667889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.++++.. ..+++..+..++.|++.|++|||+. +|+|||++|+||+++.++.++|+|||++........ .
T Consensus 89 ~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-~ 162 (267)
T cd06646 89 GGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA-K 162 (267)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc-c
Confidence 999999998763 4689999999999999999999999 999999999999999999999999999987643221 2
Q ss_pred ccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 960 TTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.....|+..|+|||.+. ...++.++||||+||++|||++|+.||...... ... ... .... ...+.
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~----~~~----~~~-~~~~---~~~~~ 230 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM----RAL----FLM-SKSN---FQPPK 230 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh----hhh----eee-ecCC---CCCCC
Confidence 23346889999999884 345788999999999999999999998532211 000 000 0000 00011
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
.. .....+..+.+++.+|++.+|++||++.++++++
T Consensus 231 ~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 LK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred Cc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 11 1123456899999999999999999999998764
No 154
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.1e-33 Score=311.63 Aligned_cols=258 Identities=25% Similarity=0.392 Sum_probs=207.9
Q ss_pred cCccccceecccCceEEEEEEEcC----CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIP----GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.+|.+.+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++|||++++++++.+ ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457888999999999999996543 3578999887654 3455678999999999999999999998875 457899
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 85 MELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 9999999999999765 34689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
.........++..|+|||.+.+..++.++||||||+++||+++ |..||..... . +..... ..+...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-----~---~~~~~~-~~~~~~---- 227 (270)
T cd05056 161 SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN-----N---DVIGRI-ENGERL---- 227 (270)
T ss_pred cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH-----H---HHHHHH-HcCCcC----
Confidence 3332333345678999999988889999999999999999986 9999864321 1 111111 111111
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCCC
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPPA 1081 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~~ 1081 (1082)
..+...+..+.+++.+|+..+|++||++.++++.|+++....
T Consensus 228 -----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~ 269 (270)
T cd05056 228 -----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269 (270)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 112344568999999999999999999999999999987643
No 155
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.2e-33 Score=314.45 Aligned_cols=259 Identities=20% Similarity=0.337 Sum_probs=206.0
Q ss_pred HhcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
..++|++.+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567999999999999999999543 24689999876443 2334567889999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEE
Q 045553 872 MFLIYNYLPGGNLEKFIQDRP--------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYL 943 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 943 (1082)
.++||||+++|+|.++++... ....++..+.+++.|++.|++|||+. +|+||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence 999999999999999997532 23456778899999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHH
Q 045553 944 SDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWAS 1021 (1082)
Q Consensus 944 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 1021 (1082)
+|||+++........ ......++..|+|||.+.++.++.++|||||||++|||++ |..||... ...++..
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~--------~~~~~~~ 232 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL--------SNEQVLK 232 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHH
Confidence 999999865432221 1122345678999999999899999999999999999998 67787532 1223322
Q ss_pred HHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1022 MLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1022 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.....+ ... .+...+..+.+++.+|++.+|++||++.++++.|+...
T Consensus 233 ~~~~~~-~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 233 FVMDGG-YLD---------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHcCC-CCC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 222221 111 12233468999999999999999999999999998754
No 156
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.8e-34 Score=322.99 Aligned_cols=236 Identities=25% Similarity=0.355 Sum_probs=193.1
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|+.. +++.||||++.... ....+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999654 58899999987532 23445677888888776 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~~ 154 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTTS 154 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Cccc
Confidence 9999998764 4689999999999999999999999 99999999999999999999999999987543221 2233
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|++.|+|||++.+..++.++||||+||++|||++|+.||... ...+...... .+.. ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~--------~~~~~~~~i~-~~~~----------~~ 215 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE--------NEDDLFEAIL-NDEV----------VY 215 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC--------CHHHHHHHHh-cCCC----------CC
Confidence 457999999999999999999999999999999999999999632 2223333322 1111 11
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSM 1067 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~ 1067 (1082)
+.....++.+++.+|++.||++||++
T Consensus 216 ~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 216 PTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 22345678999999999999999998
No 157
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5e-34 Score=318.77 Aligned_cols=263 Identities=22% Similarity=0.391 Sum_probs=203.2
Q ss_pred hcCccccceecccCceEEEEEEEcC---------------CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP---------------GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLI 863 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~---------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~ 863 (1082)
..+|++.+.||+|+||.||+|.... ...||+|.+.... ......|.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3579999999999999999985432 2358999987542 23346789999999999999999999
Q ss_pred eeeccCCeEEEEEeecCCCCHHHHHhhCC----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCE
Q 045553 864 GYHVSEAEMFLIYNYLPGGNLEKFIQDRP----------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNI 933 (1082)
Q Consensus 864 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Ni 933 (1082)
+++......++||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 99999999999999999999999996532 12478899999999999999999999 999999999999
Q ss_pred EEcCCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCccCC
Q 045553 934 LLDNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS--DKKALDPSFCSF 1010 (1082)
Q Consensus 934 ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt--g~~p~~~~~~~~ 1010 (1082)
+++.++.+||+|||++......... ......++..|+|||+..++.++.++|||||||++|||++ |..||....
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~--- 237 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS--- 237 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC---
Confidence 9999999999999999765433221 1222345678999999998899999999999999999998 555665321
Q ss_pred CCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1011 GNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
.....+............ .....+...+..+.+++.+|++.+|++||+|.+|++.|++
T Consensus 238 --~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 238 --DEQVIENTGEFFRNQGRQ------IYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred --hHHHHHHHHHhhhhcccc------ccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 111111111111111100 0011122345689999999999999999999999999864
No 158
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-35 Score=323.54 Aligned_cols=252 Identities=24% Similarity=0.404 Sum_probs=212.7
Q ss_pred ccccceecccCceEEEEEEEcC--C--eEEEEEEeecCccc-cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 803 FNVQNCIGSGGFGATYKAEIIP--G--VVVAVKRLSVGRFQ-GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~~--~--~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.+..++||+|.||.|++|.|.. | ..||||.+...... ....|.+|+.+|-+++|||+++++|+..+ ....+|||
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 4456789999999999998763 3 56899999876543 67899999999999999999999999987 67889999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
.++.|||.+.|++.....+-......++.|||.||+||.++ +.||||+..+|+++-....+||+|||+.+-++..+.
T Consensus 191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 99999999999996677888899999999999999999999 999999999999999999999999999998876554
Q ss_pred cc--ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 958 HA--TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 958 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
+. .....-.+.|+|||.+...+++.++|||+|||.+|||++ |..||... .-.+..+ .+|
T Consensus 268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~--------~g~qIL~----------~iD 329 (1039)
T KOG0199|consen 268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC--------RGIQILK----------NID 329 (1039)
T ss_pred ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC--------CHHHHHH----------hcc
Confidence 32 222345678999999999999999999999999999998 56777533 2223322 334
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
...+-.-|..+++++.+++..||...|++||+|..|.+.+-.
T Consensus 330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 444445678899999999999999999999999999855533
No 159
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.2e-34 Score=322.80 Aligned_cols=241 Identities=23% Similarity=0.299 Sum_probs=195.6
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCC-ceeeEeeeeccCCeEEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHP-NLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lV~ 876 (1082)
+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+..|.++++.++|+ +|+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788999999999999999654 57899999987532 23456678899999999765 5888999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 999999999999764 4688999999999999999999999 99999999999999999999999999987532221
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..+...... ...
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--------~~~~~~~i~-~~~-------- 217 (324)
T cd05587 156 -KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--------EDELFQSIM-EHN-------- 217 (324)
T ss_pred -CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-cCC--------
Confidence 12234568999999999999999999999999999999999999996321 112222221 111
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSM 1067 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 1067 (1082)
...+.....++.+++.+|++.+|.+|++.
T Consensus 218 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 --VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 01223345678999999999999999976
No 160
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.1e-33 Score=311.48 Aligned_cols=255 Identities=24% Similarity=0.444 Sum_probs=204.8
Q ss_pred cCccccceecccCceEEEEEEEcC-C---eEEEEEEeecC-ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIP-G---VVVAVKRLSVG-RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~-~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
++|++.+.||+|+||.||+|.... + ..||||.+... .....++|..|++++++++||||+++++++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 357889999999999999997543 3 36999998754 233456899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||++......
T Consensus 84 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 84 TEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 9999999999999865 34689999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCc-ccc-Ccc--cCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 956 ETH-ATT-DVA--GTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 956 ~~~-~~~-~~~--gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
... ... ... .+..|+|||++.+..++.++||||+||++|||++ |..||.... ......++ .....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~-----~~~~~~~i----~~~~~- 229 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-----NQDVINAI----EQDYR- 229 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC-----HHHHHHHH----HcCCc-
Confidence 221 111 111 2457999999999999999999999999999886 999986321 11222221 11110
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
...+.+.+..+.+++.+|++.+|++||++.+|++.|+++
T Consensus 230 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 --------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 011233456789999999999999999999999999875
No 161
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.1e-34 Score=320.51 Aligned_cols=257 Identities=29% Similarity=0.407 Sum_probs=202.9
Q ss_pred hcCccccceecccCceEEEEEEEc-CCe--EEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGV--VVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 874 (1082)
.++|++.+.||+|+||.||+|... ++. .+|+|.+.... ......+.+|++++.++ +||||+++++++.+.+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 457899999999999999999754 343 46777765432 23456788999999999 89999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc
Q 045553 875 IYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN 940 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 940 (1082)
||||+++++|.++++... ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 999999999999997542 23578999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHH
Q 045553 941 AYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAW 1019 (1082)
Q Consensus 941 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~ 1019 (1082)
+||+|||++....... ......++..|+|||++.+..++.++|||||||++|||++ |..||.... ..+.
T Consensus 163 ~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--------~~~~ 232 (303)
T cd05088 163 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CAEL 232 (303)
T ss_pred EEeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC--------hHHH
Confidence 9999999986432111 1111234668999999988889999999999999999998 999986321 1122
Q ss_pred HHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1020 ASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1020 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.... ..+. ....+...+..+.+++.+|++.+|++||++.+++++|+++..
T Consensus 233 ~~~~-~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 233 YEKL-PQGY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HHHH-hcCC---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2221 1110 001122334578999999999999999999999999987643
No 162
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.2e-34 Score=323.10 Aligned_cols=242 Identities=26% Similarity=0.325 Sum_probs=196.5
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|.++++.. +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999754 57899999987542 23345677888888765 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
++|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~ 154 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTT 154 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-cccc
Confidence 9999998764 4689999999999999999999999 99999999999999999999999999987543222 2233
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|++.|+|||++.+..++.++||||+||++|||++|+.||.... ............ . ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~--------~~~~~~~i~~~~-~----------~~ 215 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN--------EDDLFESILHDD-V----------LY 215 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC--------HHHHHHHHHcCC-C----------CC
Confidence 4578999999999999999999999999999999999999997421 222223222211 1 11
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCC-------CHHHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRP-------SMRQVAQQ 1073 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RP-------t~~ev~~~ 1073 (1082)
+.....++.+++.+|++.+|++|| ++.++.++
T Consensus 216 p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 216 PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 223346789999999999999999 77777654
No 163
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8.4e-34 Score=314.19 Aligned_cols=246 Identities=24% Similarity=0.346 Sum_probs=197.0
Q ss_pred ecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 809 IGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 809 lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
||+|+||+||+|.. .+++.||+|++..... ...+.+..|+++++.++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999964 4689999999865432 2335677899999999999999999999999999999999999999
Q ss_pred HHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccC
Q 045553 885 EKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTD 962 (1082)
Q Consensus 885 ~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 962 (1082)
..++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++..+..... ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 9887542 235689999999999999999999999 999999999999999999999999999987643322 2234
Q ss_pred cccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCC
Q 045553 963 VAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGP 1042 (1082)
Q Consensus 963 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 1042 (1082)
..|++.|+|||++.+..++.++||||||+++|||++|+.||...... .......... ..+ .. ..+
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~-~~~--------~~--~~~ 221 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK----VENKELKQRI-LND--------SV--TYP 221 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc----hhHHHHHHhh-ccc--------CC--CCc
Confidence 57899999999999999999999999999999999999999743211 1111111111 111 00 123
Q ss_pred hHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1043 HDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1043 ~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
...+..+.+++.+|++.+|++|| ++.|++++
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 34556889999999999999999 67777754
No 164
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.1e-33 Score=312.90 Aligned_cols=246 Identities=24% Similarity=0.340 Sum_probs=196.7
Q ss_pred ecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 809 IGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 809 lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
||+|+||.||+++. .+|+.||+|++..... ...+.+..|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999965 4589999999864321 2234556799999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcc
Q 045553 885 EKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVA 964 (1082)
Q Consensus 885 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 964 (1082)
.+++.......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRA 155 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeeccC
Confidence 9998776566789999999999999999999999 99999999999999999999999999998764332 223346
Q ss_pred cCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChH
Q 045553 965 GTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHD 1044 (1082)
Q Consensus 965 gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1044 (1082)
|+..|+|||++.+..++.++||||+||++|||++|+.||..... ......+....... ... . ....
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~-~~~----~-----~~~~ 221 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKE----KVAKEELKRRTLED-EVK----F-----EHQN 221 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcc----hhhHHHHHHHhhcc-ccc----c-----cccc
Confidence 89999999999998899999999999999999999999864221 11112222221111 110 0 0112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1045 DLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1045 ~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...++.+++.+|++.+|++||+++|+++.
T Consensus 222 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 222 FTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred CCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 34578999999999999999999776543
No 165
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=8.3e-34 Score=310.30 Aligned_cols=248 Identities=29% Similarity=0.456 Sum_probs=200.2
Q ss_pred ceecccCceEEEEEEEcC----CeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEIIP----GVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
++||+|+||.||+|.... +..||+|.+..... ...+++.+|+++++++.|+|++++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999995432 26899999875543 34567899999999999999999999876 4568999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc-
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT- 960 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~- 960 (1082)
++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++..........
T Consensus 80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~ 154 (257)
T cd05060 80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA 154 (257)
T ss_pred CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence 99999998753 689999999999999999999999 999999999999999999999999999987654333221
Q ss_pred -cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 961 -TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 961 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
....++..|+|||...+..++.++||||||+++|||++ |+.||.... . .+..... ..+...
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~-----~---~~~~~~~-~~~~~~-------- 217 (257)
T cd05060 155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK-----G---AEVIAML-ESGERL-------- 217 (257)
T ss_pred ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC-----H---HHHHHHH-HcCCcC--------
Confidence 11223568999999999999999999999999999998 999986421 1 2222222 222111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+...+..+.+++.+|++.+|++||++.+|++.|+++.
T Consensus 218 -~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 -PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 122344568899999999999999999999999999875
No 166
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.1e-34 Score=331.74 Aligned_cols=252 Identities=22% Similarity=0.296 Sum_probs=198.7
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688999999999999999964 468999999986432 233466888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999764 4688999999999999999999999 99999999999999999999999999996432110
Q ss_pred Cc----------------------------------------------cccCcccCCCcccchhcccCCCCchhhHHHHH
Q 045553 957 TH----------------------------------------------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFG 990 (1082)
Q Consensus 957 ~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG 990 (1082)
.. ......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 00124699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCC---CCCH
Q 045553 991 VVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSS---RPSM 1067 (1082)
Q Consensus 991 vll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~---RPt~ 1067 (1082)
|++|||++|+.||.... ................. ........++.+++.+|+. +|.+ |+++
T Consensus 236 vil~elltG~~Pf~~~~--------~~~~~~~i~~~~~~~~~-------p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 236 AIMFECLIGWPPFCSEN--------SHETYRKIINWRETLYF-------PDDIHLSVEAEDLIRRLIT-NAENRLGRGGA 299 (377)
T ss_pred hhhhhhhcCCCCCCCCC--------HHHHHHHHHccCCccCC-------CCCCCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence 99999999999996321 11222222211111111 0111234678899999997 6665 4699
Q ss_pred HHHHHH
Q 045553 1068 RQVAQQ 1073 (1082)
Q Consensus 1068 ~ev~~~ 1073 (1082)
.|++++
T Consensus 300 ~~~l~h 305 (377)
T cd05629 300 HEIKSH 305 (377)
T ss_pred HHHhcC
Confidence 998875
No 167
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.2e-34 Score=314.37 Aligned_cols=258 Identities=25% Similarity=0.422 Sum_probs=205.6
Q ss_pred hcCccccceecccCceEEEEEEEc-CCe----EEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGV----VVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
..+|++.++||+|+||+||+|++. ++. .||+|++.... ....+.+.+|+.+++.++|||++++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 356888999999999999999753 444 48999986543 2345678899999999999999999999875 4578
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
++|||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 85 l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 999999999999999865 34689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 954 TSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 954 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
..... ......++..|+|||...+..++.++|||||||++|||++ |..||+... ...... .+..+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~~~----~~~~~~~~- 230 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP-----AREIPD----LLEKGERL- 230 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHH----HHHCCCcC-
Confidence 33221 1122345678999999999999999999999999999998 888886321 111222 12222111
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
..+...+..+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 231 --------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 231 --------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred --------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 11223456789999999999999999999999999887543
No 168
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.2e-33 Score=313.83 Aligned_cols=262 Identities=23% Similarity=0.386 Sum_probs=206.4
Q ss_pred CccccceecccCceEEEEEEE-----cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-----IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEMF 873 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 873 (1082)
.|++.+.||+|+||.||+|+. .++..||+|.+.... ....+.+.+|++++++++|||++++.+++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 478889999999999999964 357899999986543 33456789999999999999999999988765 5689
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++...
T Consensus 85 lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccc
Confidence 999999999999999764 34689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCc--cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCC-------CCCccHHHHHHHHH
Q 045553 954 TSETH--ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSF-------GNGFNIVAWASMLL 1024 (1082)
Q Consensus 954 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~-------~~~~~~~~~~~~~~ 1024 (1082)
..... ......++..|+|||+..+..++.++||||||+++|||++++.|........ ........++. ..
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 239 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR-VL 239 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH-HH
Confidence 33221 1223456778999999998889999999999999999999887653221100 01111112211 11
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
..+... ..+...+..+.+++.+|++.+|++||++.++++.|+++
T Consensus 240 ~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 240 EEGKRL---------PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HcCccC---------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 222111 11233456899999999999999999999999999886
No 169
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=7.7e-34 Score=327.81 Aligned_cols=264 Identities=22% Similarity=0.315 Sum_probs=200.2
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccCC-----eEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA-----EMF 873 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 873 (1082)
+|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+++++.++||||+++++++.... ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999964 56899999998643 2234567889999999999999999999998766 789
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+. ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999995 688888765 34689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCC--------CCccHHHH-----
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFG--------NGFNIVAW----- 1019 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~--------~~~~~~~~----- 1019 (1082)
...........++..|+|||++.+. .++.++||||+||++|||++|+.||........ .......+
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 4443334445689999999998874 578999999999999999999999974321100 00000000
Q ss_pred -HHHHHhc-CCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1020 -ASMLLLQ-GRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1020 -~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+.. ......... .. ........++.+++.+|++.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 235 GARAHILRGPHKPPSLPV-LY-TLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHhCCCCCCchHH-hc-ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000000 000000000 00 0111235678899999999999999999999875
No 170
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.1e-33 Score=316.33 Aligned_cols=263 Identities=24% Similarity=0.411 Sum_probs=206.8
Q ss_pred hcCccccceecccCceEEEEEEEcC-----------------CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP-----------------GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVT 861 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 861 (1082)
..+|++.+.||+|+||.||+|+... +..||+|.+.... ....+++.+|++++++++|||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578999999999999999986542 2568999987543 234677899999999999999999
Q ss_pred EeeeeccCCeEEEEEeecCCCCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCC
Q 045553 862 LIGYHVSEAEMFLIYNYLPGGNLEKFIQDRP---------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSN 932 (1082)
Q Consensus 862 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 932 (1082)
+++++..++..++||||+++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 9999999999999999999999999997643 13689999999999999999999999 99999999999
Q ss_pred EEEcCCCcEEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCccC
Q 045553 933 ILLDNNLNAYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS--DKKALDPSFCS 1009 (1082)
Q Consensus 933 ill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt--g~~p~~~~~~~ 1009 (1082)
|+++.++.++|+|||+++....... .......++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-- 238 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--
Confidence 9999999999999999986543322 12233456788999999998889999999999999999998 666664221
Q ss_pred CCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1010 FGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1010 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
.................... ...+...+.++.+++.+|++.+|++||++.||++.|++
T Consensus 239 ---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 ---DQQVIENAGHFFRDDGRQIY------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred ---hHHHHHHHHhcccccccccc------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 11122222111111111111 11223345689999999999999999999999999863
No 171
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1e-33 Score=316.51 Aligned_cols=263 Identities=21% Similarity=0.372 Sum_probs=204.1
Q ss_pred hcCccccceecccCceEEEEEEEc-----------------CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-----------------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVT 861 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 861 (1082)
.++|++.+.||+|+||.||+|+.. ++..||+|++.... ....+++.+|+++++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 356899999999999999998532 23578999987543 234567899999999999999999
Q ss_pred EeeeeccCCeEEEEEeecCCCCHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCC
Q 045553 862 LIGYHVSEAEMFLIYNYLPGGNLEKFIQDRPR---------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSN 932 (1082)
Q Consensus 862 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 932 (1082)
+++++...+..++||||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 99999999999999999999999999986431 3477889999999999999999999 99999999999
Q ss_pred EEEcCCCcEEEeecccceecCCCCCcc-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCccC
Q 045553 933 ILLDNNLNAYLSDFGLARLLGTSETHA-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS--DKKALDPSFCS 1009 (1082)
Q Consensus 933 ill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt--g~~p~~~~~~~ 1009 (1082)
|+++.++.++++|||+++.+....... .....++..|+|||+..++.++.++|||||||++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS-- 238 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC--
Confidence 999999999999999998654332211 222344678999999988889999999999999999998 667775321
Q ss_pred CCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1010 FGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1010 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
.................... ...+..++..+.+++.+|++.+|++||++.||++.|++
T Consensus 239 ---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 239 ---DEQVIENTGEFFRDQGRQVY------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ---hHHHHHHHHHHHhhcccccc------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11111111111111110000 01123345789999999999999999999999999874
No 172
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8.6e-34 Score=342.90 Aligned_cols=258 Identities=21% Similarity=0.277 Sum_probs=203.7
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.++||+|+||.||+|... +|+.||+|++.... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999654 58999999986532 223467899999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecc
Q 045553 877 NYLPGGNLEKFIQDRP---------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFG 947 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 947 (1082)
||+++++|.+++.... ....++..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999987421 23456778899999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCC-----------------ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCC
Q 045553 948 LARLLGTSET-----------------HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSF 1010 (1082)
Q Consensus 948 la~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~ 1010 (1082)
+++....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~-- 236 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG-- 236 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch--
Confidence 9987621110 011235699999999999999999999999999999999999999964211
Q ss_pred CCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhhh
Q 045553 1011 GNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRP-SMRQVAQQLKQI 1077 (1082)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-t~~ev~~~L~~i 1077 (1082)
. ..... .... ++... ....+.+..+.+++.+|++.+|++|| ++.++.+.|+..
T Consensus 237 ---~---ki~~~----~~i~---~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 237 ---R---KISYR----DVIL---SPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred ---h---hhhhh----hhcc---Chhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 00000 0000 00000 00123446788999999999999996 677788877765
No 173
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.3e-33 Score=312.56 Aligned_cols=255 Identities=21% Similarity=0.372 Sum_probs=206.3
Q ss_pred cCccccceecccCceEEEEEEEc------CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
++|++.+.||+|+||.||+|... ++..||+|.+.... ......+.+|+.+++.++|||++++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 46888999999999999999654 24789999986543 234567889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEee
Q 045553 874 LIYNYLPGGNLEKFIQDRP--------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSD 945 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 945 (1082)
+||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECC
Confidence 9999999999999997532 23478899999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHH
Q 045553 946 FGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASML 1023 (1082)
Q Consensus 946 fGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1023 (1082)
||+++....... .......++..|+|||.+.+..++.++||||||+++||+++ |+.||... ...+.....
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~--------~~~~~~~~~ 234 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL--------SNEEVLKFV 234 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC--------CHHHHHHHH
Confidence 999986543322 12233456789999999998889999999999999999998 88888532 112222222
Q ss_pred HhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1024 LLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1024 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
. .+... ..+...+.++.+++.+|++.+|++|||+.|+++.|++
T Consensus 235 ~-~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 235 I-DGGHL---------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred h-cCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 2 22111 1223346789999999999999999999999998863
No 174
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7.1e-34 Score=333.32 Aligned_cols=259 Identities=22% Similarity=0.319 Sum_probs=193.7
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccC--------C
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--------A 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------~ 870 (1082)
..+|++.++||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 45799999999999999999965 468999999885432 2345799999999999999998876432 2
Q ss_pred eEEEEEeecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-cEEEeecc
Q 045553 871 EMFLIYNYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL-NAYLSDFG 947 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfG 947 (1082)
..++||||++ +++.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccc
Confidence 4678999996 5787777542 245789999999999999999999999 999999999999999665 79999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
+++.+.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+...+ .....
T Consensus 217 la~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~----~~~~~i~-~~~~~ 289 (440)
T PTZ00036 217 SAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV----DQLVRII-QVLGT 289 (440)
T ss_pred cchhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHH-HHhCC
Confidence 998664322 2234578999999999876 46899999999999999999999999642111 1111111 11000
Q ss_pred C----------CCcc-----ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1027 G----------RPCE-----FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1027 ~----------~~~~-----~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
. ...+ .....+....|...+.++.+++.+|++.+|++|||+.|++++
T Consensus 290 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 290 PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0 0000 000011111223345689999999999999999999999854
No 175
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=9.7e-34 Score=318.88 Aligned_cols=241 Identities=25% Similarity=0.388 Sum_probs=193.6
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhc-cCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGR-VQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|+.. +++.||||+++... ......+..|..+++. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999754 57899999987542 2234556677777775 4899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 154 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-KTC 154 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-cee
Confidence 9999999763 4688999999999999999999999 999999999999999999999999999875422221 223
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...||..|+|||++.+..++.++||||+||++|||++|+.||... ...+......... . ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~--------~~~~~~~~i~~~~-~----------~~ 215 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGH--------DEEELFQSIRMDN-P----------CY 215 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCC-C----------CC
Confidence 456899999999999999999999999999999999999999632 1122222221111 0 11
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMR-QVAQ 1072 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~-ev~~ 1072 (1082)
+.....++.+++.+|++.+|++||++. ++.+
T Consensus 216 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 216 PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 223445788999999999999999997 5543
No 176
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.1e-33 Score=320.95 Aligned_cols=255 Identities=23% Similarity=0.309 Sum_probs=200.7
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecC---ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG---RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+.+++.++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36889999999999999999754 5899999998642 2233456889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999764 34689999999999999999999999 99999999999999999999999999998765433
Q ss_pred CccccCcccCCCcccchhccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 957 THATTDVAGTFGYVAPEYAMT-----CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
........||+.|+|||++.. ..++.++||||+||++|||++|+.||... ...+.............
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~--------~~~~~~~~i~~~~~~~~ 228 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--------SLVETYGKIMNHKEHFQ 228 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC--------CHHHHHHHHHcCCCccc
Confidence 333333569999999999863 45788999999999999999999999632 22233333322211111
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSS--RPSMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~ev~~~ 1073 (1082)
. . ......+..+.+++.+|+..++++ ||++.+++++
T Consensus 229 ~-~-----~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 F-P-----PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred C-C-----CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1 0 011124557788888877654443 8899998876
No 177
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.5e-34 Score=316.78 Aligned_cols=250 Identities=23% Similarity=0.393 Sum_probs=206.3
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+|++++++++......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 5788999999999999999964 468999999998766666678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++... .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+........ .
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~ 172 (296)
T cd06654 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (296)
T ss_pred CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc-c
Confidence 999999998753 578999999999999999999999 999999999999999999999999999876543222 1
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
.....|++.|+|||.+.+..++.++|||||||++|+|++|+.||..... ..+.......+. .. +
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~--------~~~~~~~~~~~~-~~-----~-- 236 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--------LRALYLIATNGT-PE-----L-- 236 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH--------HHhHHHHhcCCC-CC-----C--
Confidence 2334688999999999988899999999999999999999999964221 111111111111 00 0
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+|+..+|++||++.||+++
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 1123345678999999999999999999999874
No 178
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.8e-33 Score=313.12 Aligned_cols=256 Identities=27% Similarity=0.435 Sum_probs=206.7
Q ss_pred hcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 872 (1082)
.++|++.+.||+|+||.||+|... ++..||+|++..... ...+++.+|+.++++++|||++++++++..+...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 356889999999999999999753 468899999875432 3456789999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCC
Q 045553 873 FLIYNYLPGGNLEKFIQDRP--------------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSN 932 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 932 (1082)
++||||+++++|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 99999999999999997532 13478889999999999999999999 99999999999
Q ss_pred EEEcCCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCC
Q 045553 933 ILLDNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSF 1010 (1082)
Q Consensus 933 ill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~ 1010 (1082)
|+++.++.++|+|||.+......... ......++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~---- 236 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM---- 236 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----
Confidence 99999999999999998765433221 1222345678999999999999999999999999999997 77787532
Q ss_pred CCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1011 GNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
...++.... ..+.... .+...+.++.+++.+|++.+|++||++.|+++.|++
T Consensus 237 ----~~~~~~~~~-~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 237 ----AHEEVIYYV-RDGNVLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ----CHHHHHHHH-hcCCCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 222333322 2222211 122345689999999999999999999999999874
No 179
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.3e-33 Score=305.53 Aligned_cols=250 Identities=22% Similarity=0.384 Sum_probs=205.3
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeecc-CCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS-EAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lV~E 877 (1082)
+|++.+.||+|++|.||+|... +++.||+|++.... ....+.+.+|++++++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 5889999999999999999644 57899999986543 2345678899999999999999999988764 446899999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++++|.+++.......+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 99999999999876566789999999999999999999999 999999999999999999999999999987643322
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
......|++.|+|||+..+..++.++||||+|++++||++|+.||+.. +...+..... .+...
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~--------~~~~~~~~~~-~~~~~------- 220 (257)
T cd08223 158 -MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK--------DMNSLVYRII-EGKLP------- 220 (257)
T ss_pred -ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHH-hcCCC-------
Confidence 223456889999999999999999999999999999999999998632 2222222222 22211
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+|++.+|++||++.|++++
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 221 --PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred --CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1223455689999999999999999999999864
No 180
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1e-33 Score=320.30 Aligned_cols=241 Identities=22% Similarity=0.298 Sum_probs=195.7
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
+|++.+.||+|+||.||+|... +++.||||++..... ...+.+..|..++... +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999654 578999999875422 2334566777887777 5889999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 999999999998764 4689999999999999999999999 99999999999999999999999999997543222
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||.... ............ .
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~--------~~~~~~~i~~~~-~------- 218 (323)
T cd05616 156 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHN-V------- 218 (323)
T ss_pred -CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-C-------
Confidence 12334579999999999999999999999999999999999999997421 122222222111 1
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSM 1067 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 1067 (1082)
..|.....++.+++.+|++.+|++|++.
T Consensus 219 ---~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 ---AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ---CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1233455688999999999999999974
No 181
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3e-34 Score=331.89 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=198.0
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 688999999999999999964 458999999986432 2234668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC-
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE- 956 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~- 956 (1082)
|+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..+....
T Consensus 82 ~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 82 YIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 99999999999864 4688899999999999999999999 99999999999999999999999999975331000
Q ss_pred -----------------------------------------CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHH
Q 045553 957 -----------------------------------------THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLE 995 (1082)
Q Consensus 957 -----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~e 995 (1082)
........||+.|+|||++.+..++.++|||||||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 001123579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCC---CHHHHHH
Q 045553 996 LISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRP---SMRQVAQ 1072 (1082)
Q Consensus 996 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RP---t~~ev~~ 1072 (1082)
|++|+.||.... ...+............. ........++.+++.+|+ .+|++|+ ++.|+++
T Consensus 237 ll~G~~Pf~~~~--------~~~~~~~i~~~~~~~~~-------~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 237 MLVGQPPFLADT--------PAETQLKVINWETTLHI-------PSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred hhhCCCCCCCCC--------HHHHHHHHhccCccccC-------CCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 999999997432 11222222111100000 111123456777888866 5999999 8888876
Q ss_pred H
Q 045553 1073 Q 1073 (1082)
Q Consensus 1073 ~ 1073 (1082)
+
T Consensus 301 h 301 (376)
T cd05598 301 H 301 (376)
T ss_pred C
Confidence 5
No 182
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8.5e-34 Score=319.99 Aligned_cols=242 Identities=23% Similarity=0.321 Sum_probs=196.9
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||+||+|+.. ++..||||++.... ......+..|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999655 57899999997542 23345677888888877 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~ 154 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTTS 154 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cccc
Confidence 9999998764 4689999999999999999999999 99999999999999999999999999987532222 1223
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|++.|+|||++.+..++.++||||+||++|||++|+.||... +......... .... ..
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~--------~~~~~~~~i~-~~~~----------~~ 215 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD--------DEDELFQSIL-EDEV----------RY 215 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC--------CHHHHHHHHH-cCCC----------CC
Confidence 456899999999999999999999999999999999999999632 1222222222 1111 12
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSM-----RQVAQQ 1073 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~-----~ev~~~ 1073 (1082)
+...+..+.+++.+|++.||++||++ .+++++
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 23345678999999999999999999 777653
No 183
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.2e-33 Score=322.07 Aligned_cols=260 Identities=24% Similarity=0.382 Sum_probs=204.1
Q ss_pred hcCccccceecccCceEEEEEEE------cCCeEEEEEEeecCcc-ccHHHHHHHHHHHhcc-CCCceeeEeeeeccC-C
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI------IPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSE-A 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~ 870 (1082)
.++|++.+.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35799999999999999999953 3478999999975432 3346688999999999 689999999987654 5
Q ss_pred eEEEEEeecCCCCHHHHHhhCC----------------------------------------------------------
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRP---------------------------------------------------------- 892 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~---------------------------------------------------------- 892 (1082)
..++||||+++|+|.++++...
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 6799999999999999987532
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc-cccCcc
Q 045553 893 -------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH-ATTDVA 964 (1082)
Q Consensus 893 -------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~ 964 (1082)
...+++..+.+++.|+++|++|||+. +|+||||||+||++++++.+||+|||++......... ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 12468888999999999999999999 9999999999999999999999999999865332221 122234
Q ss_pred cCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCCh
Q 045553 965 GTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPH 1043 (1082)
Q Consensus 965 gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 1043 (1082)
++..|+|||++.+..++.++||||||+++|||++ |..||...... .........+.... .+.
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~---------~~~ 305 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------EEFCRRLKEGTRMR---------APD 305 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--------HHHHHHHhccCCCC---------CCC
Confidence 5678999999999899999999999999999997 88888532111 11112222221111 111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1044 DDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1044 ~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
....++.+++.+||+.+|++||++.||+++|+.+..
T Consensus 306 ~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 306 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 233578999999999999999999999999998764
No 184
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.2e-33 Score=311.77 Aligned_cols=254 Identities=23% Similarity=0.397 Sum_probs=203.0
Q ss_pred HHhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeeccC------
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSE------ 869 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~------ 869 (1082)
.+++.|++.+.||+|+||.||+|... +++.||+|++.... .....+..|+.+++++ +|||++++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35678999999999999999999654 58899999987543 3456788999999998 699999999988652
Q ss_pred CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
...++||||+++++|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 4689999999999999999876566789999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
....... .......|+..|+|||++. +..++.++||||+||++|||++|+.||+.... ..... ..
T Consensus 159 ~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~-------~~~~~-~~- 228 (272)
T cd06637 159 AQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-------MRALF-LI- 228 (272)
T ss_pred eeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH-------HHHHH-HH-
Confidence 8654322 2233456899999999986 34578899999999999999999999863211 11111 11
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
........ .+...+..+.+++.+|++.+|.+||++.|++++
T Consensus 229 ~~~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 229 PRNPAPRL--------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred hcCCCCCC--------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 11111111 112334578999999999999999999999763
No 185
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=8.3e-34 Score=319.60 Aligned_cols=240 Identities=23% Similarity=0.324 Sum_probs=193.3
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhc-cCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGR-VQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|+.. +|+.||+|+++... ....+.+..|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999654 58899999997542 2234556677777765 4899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 154 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRAS 154 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Ccee
Confidence 9999998763 4688999999999999999999999 99999999999999999999999999987532221 2233
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|++.|+|||++.+..++.++||||+||++|||++|+.||... +..+...... .+. ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~--------~~~~~~~~~~-~~~----------~~~ 215 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD--------DEDELFESIR-VDT----------PHY 215 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC--------CHHHHHHHHH-hCC----------CCC
Confidence 467999999999999999999999999999999999999999632 1122222221 111 012
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMR-QVA 1071 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~-ev~ 1071 (1082)
+.....++.+++.+|++.||++||++. ++.
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 216 PRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 223456788999999999999999985 554
No 186
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2e-33 Score=316.70 Aligned_cols=259 Identities=25% Similarity=0.426 Sum_probs=206.6
Q ss_pred hcCccccceecccCceEEEEEEEc--------CCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccC
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII--------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSE 869 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 869 (1082)
..+|.+.+.||+|+||.||+|+.. ....||+|.+.... ......+..|+++++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 357889999999999999999642 24579999987543 23456788999999999 699999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL 935 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 935 (1082)
...++||||+++|+|.+++.... ...+++.++.+++.|++.|++|||+. +|+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEE
Confidence 99999999999999999997642 24588999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCCcc-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCC
Q 045553 936 DNNLNAYLSDFGLARLLGTSETHA-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNG 1013 (1082)
Q Consensus 936 ~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~ 1013 (1082)
+.++.+||+|||.++......... .....++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~------- 240 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI------- 240 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC-------
Confidence 999999999999998664322211 111234567999999999899999999999999999999 88887532
Q ss_pred ccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1014 FNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
...+.... ...+... ..+...+.++.+++.+|++.+|++||++.|+++.|+++..
T Consensus 241 -~~~~~~~~-~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 241 -PVEELFKL-LREGHRM---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred -CHHHHHHH-HHcCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 12222222 2222111 1123345678899999999999999999999999988763
No 187
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-34 Score=286.84 Aligned_cols=253 Identities=25% Similarity=0.356 Sum_probs=209.5
Q ss_pred HhcCccccceecccCceEEEEE-EEcCCeEEEEEEeecCcc----c----cHHHHHHHHHHHhcc-CCCceeeEeeeecc
Q 045553 799 ATAGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRF----Q----GVQQFAAEIRTLGRV-QHPNLVTLIGYHVS 868 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~----~----~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 868 (1082)
.-+.|...+.+|+|..++|.+. ...+|..+|+|++..... + -.+.-..|+++++++ .||+|+++.++++.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3456788899999999999888 455789999999864322 1 123446799999988 69999999999999
Q ss_pred CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 869 EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 869 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
+...++|+|.|+.|.|.+++.. .-.+++.+..+|++|+.+|+.|||.. .|||||+||+|||+|++.++||+|||+
T Consensus 95 ~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred cchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccce
Confidence 9999999999999999999987 46799999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhcc------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAM------TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM 1022 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1022 (1082)
|..+.+++ .....+||++|+|||.+. ...|+...|+||+||++|-++.|.+||... -.-.+-.
T Consensus 170 a~~l~~Ge--kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR---------kQmlMLR 238 (411)
T KOG0599|consen 170 ACQLEPGE--KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR---------KQMLMLR 238 (411)
T ss_pred eeccCCch--hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH---------HHHHHHH
Confidence 99876543 445679999999999884 346888999999999999999999999621 1123334
Q ss_pred HHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1023 LLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1023 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+.+|++. +.++...+.+...+++|.+|++.||++|-|.+|++++
T Consensus 239 ~ImeGkyq------F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 239 MIMEGKYQ------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHHhcccc------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 55566543 1222234567789999999999999999999999864
No 188
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.5e-33 Score=307.95 Aligned_cols=251 Identities=27% Similarity=0.420 Sum_probs=206.3
Q ss_pred hcCccccceecccCceEEEEEEEcC-CeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP-GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
.++|++.+.||+|+||.||+|...+ +..||+|.+..... .+++.+|++++++++|||++++++++.+....++++||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 3578999999999999999997764 78999999875533 67899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++... ...+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 80 ~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 80 CGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 9999999999764 45789999999999999999999999 999999999999999999999999999987644322
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
......|+..|+|||++.+..++.++||||||+++|+|++|+.||...... +-... ...... ...
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~--------~~~~~-~~~~~~-----~~~- 219 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM--------RAIFM-IPNKPP-----PTL- 219 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh--------hhhhh-hccCCC-----CCC-
Confidence 223345788999999999999999999999999999999999998642111 00000 000000 000
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+|++.+|++||++.||+++
T Consensus 220 -~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 220 -SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred -CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 1123345678999999999999999999999863
No 189
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=6.8e-34 Score=315.69 Aligned_cols=250 Identities=25% Similarity=0.336 Sum_probs=201.8
Q ss_pred ccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 803 FNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
|++.+.||+|+||.||+|.. .+++.||+|.+..... .....+..|+.++++++|++++++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 67788999999999999964 4689999999865422 2234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++.......+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 157 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc-
Confidence 9999999999766556799999999999999999999998 999999999999999999999999999976543222
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....|+..|+|||++.+..++.++||||+|+++|||++|+.||...... ... .......... .
T Consensus 158 -~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~----~~~-~~~~~~~~~~----------~ 221 (285)
T cd05630 158 -IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKR-EEVERLVKEV----------Q 221 (285)
T ss_pred -ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCcc----chH-HHHHhhhhhh----------h
Confidence 22346899999999999999999999999999999999999999743211 000 1111111100 0
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPS-----MRQVAQ 1072 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~ 1072 (1082)
...+.....++.+++.+|++.+|++||+ +.|+.+
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 222 EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0122234457899999999999999999 788876
No 190
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.2e-33 Score=319.98 Aligned_cols=243 Identities=20% Similarity=0.299 Sum_probs=195.6
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+.++.++ +||+|+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999654 57899999997542 23345678899998888 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|..++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTTS 154 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Ccee
Confidence 9999988763 4689999999999999999999999 99999999999999999999999999987532221 1223
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|++.|+|||++.+..++.++|||||||++|||++|+.||+..... .......+.......... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~----------~~ 222 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDN--PDMNTEDYLFQVILEKPI----------RI 222 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCC--cccccHHHHHHHHHhCCC----------CC
Confidence 457999999999999999999999999999999999999999643221 112223333333332211 12
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSM 1067 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~ 1067 (1082)
|...+..+.+++.+|++.||++||++
T Consensus 223 p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 223 PRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 23345678899999999999999984
No 191
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.8e-34 Score=330.10 Aligned_cols=251 Identities=21% Similarity=0.282 Sum_probs=195.8
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.|++.++||+|+||+||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999964 468899999986532 2334578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC-
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE- 956 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~- 956 (1082)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999999764 4688999999999999999999999 99999999999999999999999999975331100
Q ss_pred ---------------------------------------------CccccCcccCCCcccchhcccCCCCchhhHHHHHH
Q 045553 957 ---------------------------------------------THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGV 991 (1082)
Q Consensus 957 ---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv 991 (1082)
........||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00112346999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCC---HH
Q 045553 992 VLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS---MR 1068 (1082)
Q Consensus 992 ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt---~~ 1068 (1082)
++|||++|+.||.... ..+.............. ........++.+++.+++ .+|++|++ +.
T Consensus 237 il~elltG~~Pf~~~~--------~~~~~~~i~~~~~~~~~-------p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 237 ILYEMLVGQPPFLAQT--------PLETQMKVINWQTSLHI-------PPQAKLSPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred HHHHHHhCCCCCCCCC--------HHHHHHHHHccCCCcCC-------CCcccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 9999999999997421 11222222111110000 111123446667777765 59999987 77
Q ss_pred HHHHH
Q 045553 1069 QVAQQ 1073 (1082)
Q Consensus 1069 ev~~~ 1073 (1082)
|++++
T Consensus 301 ei~~h 305 (382)
T cd05625 301 EIKAH 305 (382)
T ss_pred HHhcC
Confidence 77653
No 192
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.7e-33 Score=310.19 Aligned_cols=250 Identities=24% Similarity=0.385 Sum_probs=200.5
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
+|++.++||+|+||.||+|.. .++..||+|++.... ....+++.+|++++++++|||++++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 578889999999999999964 568999999986542 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~ 149 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---I 149 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---c
Confidence 999997652 467889999999999999999999 9999999999999999999999999999865432 2
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
.....|+..|+|||++.+..++.++||||||+++|+|++|+.||........ ......+........ ... +
T Consensus 150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~-~~~-----~-- 220 (279)
T cd06619 150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQG-SLMPLQLLQCIVDED-PPV-----L-- 220 (279)
T ss_pred ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccc-ccchHHHHHHHhccC-CCC-----C--
Confidence 2335789999999999998999999999999999999999999975332211 111112222211111 000 0
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......++.+++.+|++.+|++||++.|++++
T Consensus 221 -~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 221 -PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred -CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 011234578999999999999999999999865
No 193
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=315.31 Aligned_cols=252 Identities=25% Similarity=0.311 Sum_probs=213.0
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccc---cHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQ---GVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 873 (1082)
....|++.+.||+|.||.||++... +|+.+|+|.+...... +...+.+|+++|+++. |||||.+.+++++...++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3457888999999999999999654 5999999999766443 3468899999999998 999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC----CcEEEeecccc
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN----LNAYLSDFGLA 949 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl~DfGla 949 (1082)
+|||++.||.|.+.+... .+++..+..++.|++.|++|||+. +|+|||+||+|+|+... +.+|++|||++
T Consensus 113 lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 999999999999999876 399999999999999999999999 99999999999999633 57999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||...... .... .+..++.
T Consensus 187 ~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~--------~~~~-~i~~~~~ 255 (382)
T KOG0032|consen 187 KFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF--------EIFL-AILRGDF 255 (382)
T ss_pred eEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh--------HHHH-HHHcCCC
Confidence 98766 44566789999999999999999999999999999999999999999743211 1111 2333332
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1030 CEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1030 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+..+.-......+..++.+|+..||.+|+++.+++++
T Consensus 256 ------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 ------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11122234557789999999999999999999999986
No 194
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.1e-33 Score=310.26 Aligned_cols=250 Identities=24% Similarity=0.406 Sum_probs=202.3
Q ss_pred ccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 803 FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
|++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++|||++++++++..+...++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 677889999999999999655 4788999998766556667889999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
++|..++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ....
T Consensus 87 ~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~ 161 (282)
T cd06643 87 GAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRD 161 (282)
T ss_pred CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc-cccc
Confidence 9999988753 34689999999999999999999999 99999999999999999999999999987653222 2223
Q ss_pred CcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 962 DVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
...++..|+|||++. +..++.++|||||||++|||++|+.||.... ..+.+....... ....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--------~~~~~~~~~~~~-~~~~---- 228 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN--------PMRVLLKIAKSE-PPTL---- 228 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC--------HHHHHHHHhhcC-CCCC----
Confidence 456899999999984 4557789999999999999999999986321 112222221111 1111
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+.++.+++.+||+.+|++||++.+++++
T Consensus 229 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 229 ---AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred ---CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122345689999999999999999999998764
No 195
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.6e-34 Score=323.30 Aligned_cols=238 Identities=26% Similarity=0.344 Sum_probs=195.1
Q ss_pred ceecccCceEEEEEEE----cCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 807 NCIGSGGFGATYKAEI----IPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
+.||+|+||.||+++. .+|+.||+|++..... .....+..|++++++++||||+++++++.+.+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999854 3579999999975432 234557789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-~~ 155 (318)
T cd05582 82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-KA 155 (318)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-ce
Confidence 99999999763 4689999999999999999999999 999999999999999999999999999986543322 23
Q ss_pred cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCC
Q 045553 961 TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDC 1040 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 1040 (1082)
....|++.|+|||++.+..++.++|||||||++|||++|+.||... ...+....... ... .
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~--------~~~~~~~~i~~-~~~----------~ 216 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK--------DRKETMTMILK-AKL----------G 216 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC--------CHHHHHHHHHc-CCC----------C
Confidence 3457899999999999888999999999999999999999999632 11222222221 111 1
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHH
Q 045553 1041 GPHDDLIEMLNLAIMCTGESLSSRPSMRQ 1069 (1082)
Q Consensus 1041 ~~~~~~~~l~~li~~cl~~~p~~RPt~~e 1069 (1082)
.+......+.+++.+|++.||++||++.+
T Consensus 217 ~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 22334567889999999999999999544
No 196
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.3e-33 Score=304.46 Aligned_cols=251 Identities=25% Similarity=0.378 Sum_probs=209.0
Q ss_pred CccccceecccCceEEEEEE-EcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|++.+.||+|+||.||.++ ..++..+++|++.... ....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 58889999999999999995 4458899999986543 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999876556789999999999999999999999 999999999999999999999999999987644332
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
......|+..|+|||+..+..++.++||||||+++|||++|+.||... ...+.+..... +....
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~--------~~~~~~~~~~~-~~~~~------- 220 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT--------NPLNLVVKIVQ-GNYTP------- 220 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHc-CCCCC-------
Confidence 223456899999999999888899999999999999999999998642 22233333322 21111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
.+...+.++.+++.+|++.+|++||++.|+++++
T Consensus 221 --~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 221 --VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred --CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 1123456789999999999999999999998753
No 197
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4.5e-33 Score=305.45 Aligned_cols=252 Identities=29% Similarity=0.471 Sum_probs=196.3
Q ss_pred ceecccCceEEEEEEEc----CCeEEEEEEeecC-ccccHHHHHHHHHHHhccCCCceeeEeeeec-cCCeEEEEEeecC
Q 045553 807 NCIGSGGFGATYKAEII----PGVVVAVKRLSVG-RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHV-SEAEMFLIYNYLP 880 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lV~E~~~ 880 (1082)
+.||+|+||.||+|... ++..||+|++... .....+.+.+|+.+++.++|||++++++++. .+...++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999653 2467999998543 2344567889999999999999999999775 4556899999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC---
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET--- 957 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~--- 957 (1082)
+++|.+++... ....++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 81 HGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 99999999865 33467888899999999999999999 999999999999999999999999999976533211
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
.......++..|+|||++.+..++.++||||||+++|||++|+.|+... ........... .+...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~-------~~~~~~~~~~~-~~~~~------- 221 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VDSFDITVYLL-QGRRL------- 221 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCC-------CCHHHHHHHHh-cCCCC-------
Confidence 1112334677899999999889999999999999999999965543211 11222222222 21111
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..+...+..+.+++.+||+.+|++||++.||++.|+++..
T Consensus 222 --~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 222 --LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred --CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0112234578999999999999999999999999998754
No 198
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.8e-33 Score=309.98 Aligned_cols=249 Identities=30% Similarity=0.428 Sum_probs=197.1
Q ss_pred ceecccCceEEEEEEEcC-Ce--EEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEIIP-GV--VVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~-~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|...+ +. .+|+|.++... ....+.+.+|+++++++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999997653 33 57888876432 34456788999999999 799999999999999999999999999
Q ss_pred CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecc
Q 045553 882 GNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFG 947 (1082)
Q Consensus 882 gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 947 (1082)
++|.++++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 99999997642 13578999999999999999999998 99999999999999999999999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
++...... ........+..|+|||++.+..++.++||||||+++|||++ |..||... +......... .
T Consensus 158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~--------~~~~~~~~~~-~ 226 (270)
T cd05047 158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--------TCAELYEKLP-Q 226 (270)
T ss_pred Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc--------CHHHHHHHHh-C
Confidence 98632211 11111234567999999988889999999999999999997 99998532 1122222221 1
Q ss_pred CCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1027 GRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1027 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
+... ..+......+.+++.+|++.+|.+||++.|+++.|+++.
T Consensus 227 ~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 GYRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCC---------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1111 112234457899999999999999999999999998864
No 199
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.9e-33 Score=306.63 Aligned_cols=240 Identities=23% Similarity=0.332 Sum_probs=190.9
Q ss_pred ceecccCceEEEEEEEcC-------------CeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 807 NCIGSGGFGATYKAEIIP-------------GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
+.||+|+||.||+|.+.+ ...||+|.+..........|.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999997532 2368999887655555667889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc-------EEEeec
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN-------AYLSDF 946 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-------~kl~Df 946 (1082)
+||||+++++|..+++.. ...+++..+.+++.|+++|++|||+. +|+||||||+||+++.++. ++++||
T Consensus 81 lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999999998754 34689999999999999999999999 9999999999999987654 899999
Q ss_pred ccceecCCCCCccccCcccCCCcccchhcc-cCCCCchhhHHHHHHHHHHHH-hCCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 947 GLARLLGTSETHATTDVAGTFGYVAPEYAM-TCRVSDKADVYSFGVVLLELI-SDKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 947 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slGvll~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
|++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..|+.... ..+... .
T Consensus 157 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--------~~~~~~-~- 221 (262)
T cd05077 157 GIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT--------LAEKER-F- 221 (262)
T ss_pred CCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc--------hhHHHH-H-
Confidence 998755322 2245788999999887 467899999999999999998 5777765321 111111 1
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
..+.. . . ......++.+++.+||+.||++||++.+|++.+.
T Consensus 222 ~~~~~-~-----~----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 222 YEGQC-M-----L----VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HhcCc-c-----C----CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 11110 0 0 1122357889999999999999999999998763
No 200
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=319.00 Aligned_cols=245 Identities=24% Similarity=0.397 Sum_probs=205.5
Q ss_pred eecccCceEEEEEE-EcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCHHH
Q 045553 808 CIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNLEK 886 (1082)
Q Consensus 808 ~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~ 886 (1082)
+||+|.||+||-|+ ..+...+|||.+........+...+|+...++++|.|||+++|.+.+++..-+.||-++||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 69999999999995 45578899999987777777889999999999999999999999999999999999999999999
Q ss_pred HHhhC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc-CCCcEEEeecccceecCCCCCccccCcc
Q 045553 887 FIQDR-PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD-NNLNAYLSDFGLARLLGTSETHATTDVA 964 (1082)
Q Consensus 887 ~l~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~DfGla~~~~~~~~~~~~~~~ 964 (1082)
+++.. +.-.-.+.++-.+..||++||.|||+. .|||||||-.|||++ -.|.+||+|||.++.+..-. ..+.++.
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin-P~TETFT 737 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN-PCTETFT 737 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCC-ccccccc
Confidence 99874 222337888889999999999999999 999999999999996 67999999999998775333 2345678
Q ss_pred cCCCcccchhcccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCC
Q 045553 965 GTFGYVAPEYAMTC--RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGP 1042 (1082)
Q Consensus 965 gt~~y~aPE~~~~~--~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 1042 (1082)
||..|||||++..+ .|..++|||||||.+.||.||++||.+.-.+ .. .+..-|.+ ....+.|
T Consensus 738 GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp-------qA---AMFkVGmy------KvHP~iP 801 (1226)
T KOG4279|consen 738 GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP-------QA---AMFKVGMY------KVHPPIP 801 (1226)
T ss_pred cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh-------hH---hhhhhcce------ecCCCCc
Confidence 99999999999754 5889999999999999999999999754322 11 00111111 1233567
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1043 HDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1043 ~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
++...+.+.+|.+|+.+||.+||+++++++
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 888999999999999999999999999875
No 201
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-33 Score=326.50 Aligned_cols=262 Identities=21% Similarity=0.248 Sum_probs=198.9
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..+|.+.+.||+|+||.||+|... .++.||||.... ..+.+|++++++++|+||+++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457999999999999999999655 478899996432 3457899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC-
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET- 957 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~- 957 (1082)
+ .++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 242 ~-~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 242 Y-RSDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred c-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 9 57999988764 34699999999999999999999999 999999999999999999999999999987643222
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc--cc---
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC--EF--- 1032 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--- 1032 (1082)
.......||..|+|||++.+..++.++|||||||++|||++|..|+..............+ +...+...... +.
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~-l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQ-ILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHH-HHHHHHhhccccccCCCC
Confidence 1223457999999999999999999999999999999999988765432111111111111 11122211110 00
Q ss_pred cccc------------cCCCCC-------hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAG------------LWDCGP-------HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~------------l~~~~~-------~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.... .+.... ......+.+|+.+|++.||.+|||+.|++++
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000 000000 0122468899999999999999999999875
No 202
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.2e-33 Score=305.77 Aligned_cols=248 Identities=26% Similarity=0.389 Sum_probs=201.0
Q ss_pred ceecccCceEEEEEEEcCCeEEEEEEeecCccc-cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCHH
Q 045553 807 NCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ-GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNLE 885 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 885 (1082)
++||+|+||.||+|...+++.||+|++...... ....+.+|++++++++|+||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 468999999999998777999999998765443 4567899999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc-cCcc
Q 045553 886 KFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT-TDVA 964 (1082)
Q Consensus 886 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~-~~~~ 964 (1082)
+++... ...+++..+..++.+++.|++|||+. +++||||+|+||+++.++.+||+|||.+........... ....
T Consensus 81 ~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 81 TFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 999764 34678999999999999999999999 999999999999999999999999999976542221111 1123
Q ss_pred cCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCCh
Q 045553 965 GTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPH 1043 (1082)
Q Consensus 965 gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 1043 (1082)
++..|+|||.+.++.++.++||||||+++|||++ |..||.... ....... ...+. ....+.
T Consensus 157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~--------~~~~~~~-~~~~~---------~~~~~~ 218 (251)
T cd05041 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS--------NQQTRER-IESGY---------RMPAPQ 218 (251)
T ss_pred ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC--------HHHHHHH-HhcCC---------CCCCCc
Confidence 4567999999998899999999999999999999 777775321 1111111 11111 111233
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1044 DDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1044 ~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
..+.++.+++.+|++.+|++||++.||++.|+.
T Consensus 219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 219 LCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred cCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 445689999999999999999999999998863
No 203
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=296.99 Aligned_cols=248 Identities=23% Similarity=0.393 Sum_probs=211.2
Q ss_pred ccccceecccCceEEEEE-EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 803 FNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
|++.++||+|+||.||+| ....|..||+|++... .+.+++..|+.++++.+.|++|+++|.|......|+|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 778899999999999999 4556999999998754 4578899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|++.+.++.+ ..++++.++..++...+.||+|||.. .-+|||||..|||++.+|.+|++|||.|..+.... ....
T Consensus 113 GSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM-AKRN 187 (502)
T KOG0574|consen 113 GSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM-AKRN 187 (502)
T ss_pred CcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH-HhhC
Confidence 9999999987 67899999999999999999999999 89999999999999999999999999998764322 2345
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
++.||+.|||||+++.-.|+.++||||+|+...||..|++||....+- +.+.. .+.---+.+ ..
T Consensus 188 TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM-----------RAIFM---IPT~PPPTF--~K 251 (502)
T KOG0574|consen 188 TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM-----------RAIFM---IPTKPPPTF--KK 251 (502)
T ss_pred ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc-----------ceeEe---ccCCCCCCC--CC
Confidence 578999999999999999999999999999999999999998743221 00000 000001111 24
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
|+..+.++.++++.|+-..|++|-|+.++.++
T Consensus 252 PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 252 PEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 67888999999999999999999999888775
No 204
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.1e-33 Score=310.54 Aligned_cols=251 Identities=25% Similarity=0.320 Sum_probs=201.9
Q ss_pred ccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 803 FNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
|+..+.||+|+||+||+|.. .+++.||+|.+..... .....+.+|++++++++|+|++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 67778999999999999965 4689999999865432 2234578899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++.......+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES- 157 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc-
Confidence 9999999998765555799999999999999999999999 999999999999999999999999999976543222
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....|+..|+|||++.+..++.++||||+|+++|||++|+.||...... .....+ ........ .
T Consensus 158 -~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~----~~~~~~-~~~~~~~~--~------- 222 (285)
T cd05632 158 -IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK----VKREEV-DRRVLETE--E------- 222 (285)
T ss_pred -ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH-HHhhhccc--c-------
Confidence 23457899999999999989999999999999999999999999742111 111111 11111111 0
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPS-----MRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~~ 1073 (1082)
..+......+.+++.+|++.+|++||+ +.+++++
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 223 -VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred -ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 112234457889999999999999999 6666654
No 205
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2e-33 Score=309.08 Aligned_cols=253 Identities=22% Similarity=0.319 Sum_probs=203.0
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
++|++.+.||+|+||.||+|.. .+++.||+|.++.........+.+|+.+++.++|||++++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4688889999999999999964 468999999987665555567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+....... ..
T Consensus 89 ~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~~ 162 (267)
T cd06645 89 GGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-AK 162 (267)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-cc
Confidence 999999998764 4689999999999999999999999 99999999999999999999999999997664322 22
Q ss_pred ccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 960 TTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.....|+..|+|||++. ...++.++||||+||++|||++|+.||...... ...............
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~--------~~~~~~~~~~~~~~~---- 230 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM--------RALFLMTKSNFQPPK---- 230 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch--------hhHHhhhccCCCCCc----
Confidence 23456899999999874 456888999999999999999999998532211 111111111111110
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
... ....+..+.+++.+|++.+|++||++.+|+++
T Consensus 231 ~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 231 LKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred ccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 000 11234568899999999999999999998763
No 206
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.8e-33 Score=312.81 Aligned_cols=250 Identities=23% Similarity=0.379 Sum_probs=206.0
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+|++++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 35799999999999999999964 57899999999876555667788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++.. ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||.+........
T Consensus 98 ~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~- 170 (297)
T cd06656 98 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (297)
T ss_pred cCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc-
Confidence 999999999875 3578999999999999999999999 999999999999999999999999999986543322
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
......+++.|+|||...+..++.++|||||||++|+|++|+.||...... .. .......+ ...
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~-------~~-~~~~~~~~-~~~------- 234 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-------RA-LYLIATNG-TPE------- 234 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc-------hh-eeeeccCC-CCC-------
Confidence 223346888999999999988999999999999999999999999643211 00 00000001 000
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
...+......+.+++.+|++.+|++||++.+|++
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 235 LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0112334567889999999999999999999987
No 207
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=8.4e-34 Score=315.22 Aligned_cols=265 Identities=27% Similarity=0.390 Sum_probs=208.6
Q ss_pred cCccccceecccCceEEEEEEEc-----CCeEEEEEEeecCccc-cHHHHHHHHHHHhccCCCceeeEeeeecc--CCeE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-----PGVVVAVKRLSVGRFQ-GVQQFAAEIRTLGRVQHPNLVTLIGYHVS--EAEM 872 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 872 (1082)
..|++.+.||+|+||.||+|.+. ++..||||++...... ..+.|.+|++.++.++|||++++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35777899999999999999754 3689999999765443 46789999999999999999999999877 5678
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999998753 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc--cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCC------CccHHHHHHHHH
Q 045553 953 GTSETH--ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGN------GFNIVAWASMLL 1024 (1082)
Q Consensus 953 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~------~~~~~~~~~~~~ 1024 (1082)
...... ......++..|+|||...+..++.++||||||+++|||++|+.|+......... .......+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL 239 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence 532221 111234556799999999889999999999999999999999998643211100 000011111111
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+. ....+...+.++.+++.+|++.+|++||+|.||+++|+.+.
T Consensus 240 ~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 240 KEGE---------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HcCC---------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 1111 11122334468999999999999999999999999999863
No 208
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.6e-33 Score=308.43 Aligned_cols=255 Identities=22% Similarity=0.336 Sum_probs=202.6
Q ss_pred HHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.++..+.....||+|+||.||+|.. .++..||+|.+........+.+.+|++++++++|+||+++++++..++..++||
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 3455566667899999999999964 457889999987766666778999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-CCcEEEeecccceecC
Q 045553 877 NYLPGGNLEKFIQDRPRRTV--EWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-NLNAYLSDFGLARLLG 953 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGla~~~~ 953 (1082)
||+++++|.++++... ..+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|+|||.+....
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 85 EQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred ecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 9999999999998642 234 7888999999999999999999 9999999999999986 6799999999997654
Q ss_pred CCCCccccCcccCCCcccchhcccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTC--RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
.... ......|+..|+|||++.+. .++.++||||||+++|+|++|+.||...... ....+..... .
T Consensus 161 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~-----~~~~~~~~~~--~---- 228 (268)
T cd06624 161 GINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP-----QAAMFKVGMF--K---- 228 (268)
T ss_pred cCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh-----hhhHhhhhhh--c----
Confidence 3222 22234588999999998664 3788999999999999999999998642111 1111111000 0
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.....+.....++..++.+|++.+|++||++.|++++
T Consensus 229 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 229 -----IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred -----cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 0011233445678999999999999999999999864
No 209
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.4e-33 Score=304.50 Aligned_cols=248 Identities=27% Similarity=0.458 Sum_probs=205.3
Q ss_pred ceecccCceEEEEEEEcC----CeEEEEEEeecCcccc-HHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEIIP----GVVVAVKRLSVGRFQG-VQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|.... +..||+|.+....... .+.+.+|++.++.++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999997653 7899999997654433 67889999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 882 GNLEKFIQDRP-------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 882 gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
++|.+++.... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999998752 36789999999999999999999999 999999999999999999999999999987754
Q ss_pred CCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 955 SET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 955 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
... .......++..|+|||.+.+..++.++||||+|+++|||++ |..||... ...+...... .+...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~~~~~~-~~~~~-- 226 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL--------SNEEVLEYLR-KGYRL-- 226 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC--------CHHHHHHHHH-cCCCC--
Confidence 331 22233457889999999998899999999999999999999 58888643 1222222222 11111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
..+...+.++.+++.+|++.+|++||++.|++++|+
T Consensus 227 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 -------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 123344678999999999999999999999999874
No 210
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.5e-33 Score=316.70 Aligned_cols=257 Identities=25% Similarity=0.432 Sum_probs=207.0
Q ss_pred cCccccceecccCceEEEEEEEc--------CCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII--------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 870 (1082)
.+|++.+.||+|+||.||+|... ++..||+|.+.... ....+++.+|+++++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46889999999999999999642 12478999887543 23456789999999999 8999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD 936 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 936 (1082)
..++||||+++|+|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 9999999999999999997532 24588999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCc
Q 045553 937 NNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGF 1014 (1082)
Q Consensus 937 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~ 1014 (1082)
.++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-------- 240 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-------- 240 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC--------
Confidence 9999999999999876432221 1222334568999999999999999999999999999998 77887532
Q ss_pred cHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1015 NIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...++..... .+... ..+.....++.+++.+|++.+|++||++.|+++.|+++.
T Consensus 241 ~~~~~~~~~~-~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 241 PVEELFKLLK-EGHRM---------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred CHHHHHHHHH-cCCCC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 2233333322 22111 112234568999999999999999999999999999876
No 211
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.9e-33 Score=304.76 Aligned_cols=250 Identities=23% Similarity=0.373 Sum_probs=207.4
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|++.+.||+|+||.||++.. .+|+.||+|++.... ....+++.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 488899999999999999954 468999999987542 23456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++.......+++..+.+++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 157 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL 157 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence 9999999999876555789999999999999999999999 9999999999999999999999999999866433221
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....|+..|+|||+..+..++.++||||||+++++|++|+.||... .....+....... ..
T Consensus 158 -~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~--------~~~~~~~~~~~~~-~~-------- 219 (256)
T cd08218 158 -ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG--------NMKNLVLKIIRGS-YP-------- 219 (256)
T ss_pred -hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC--------CHHHHHHHHhcCC-CC--------
Confidence 22345888999999999989999999999999999999999998632 2223333332221 11
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+.....++.+++.+|++.+|++||+|.||+++
T Consensus 220 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 220 -PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred -CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1123345679999999999999999999999874
No 212
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.1e-33 Score=314.16 Aligned_cols=261 Identities=23% Similarity=0.367 Sum_probs=202.3
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++|++.+.||+|+||.||+|... ++..+|+|.+..... ....++.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36889999999999999999654 578899998875432 3345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.++++.. ..+++..+..++.|+++||+|||+.+ +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 153 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 153 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc---
Confidence 9999999999864 46889999999999999999999732 8999999999999999999999999998765322
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc--------
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC-------- 1030 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 1030 (1082)
......|+..|+|||++.+..++.++||||||+++|||++|+.||..... .....+...........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (308)
T cd06615 154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA-----KELEAMFGRPVSEGEAKESHRPVSG 228 (308)
T ss_pred ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch-----hhHHHhhcCccccccccCCcccccC
Confidence 12335689999999999888899999999999999999999999863211 11111111000000000
Q ss_pred ------------cccccccC---CCCC-hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1031 ------------EFFTAGLW---DCGP-HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1031 ------------~~~d~~l~---~~~~-~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+..+.... ...+ .....++.+++.+|++.+|++||++.||+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 229 HPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 0000 1134578999999999999999999999876
No 213
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.5e-33 Score=309.94 Aligned_cols=253 Identities=23% Similarity=0.408 Sum_probs=204.5
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
.+.|++.+.||+|+||.||+|+.. ++..||+|.+........+.+.+|+++++.++|||++++++++..+...++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 356889999999999999999765 4899999999877666677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|..++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+....... .
T Consensus 91 ~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~ 165 (292)
T cd06644 91 CPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-Q 165 (292)
T ss_pred CCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc-c
Confidence 9999999888654 34689999999999999999999999 99999999999999999999999999987543221 1
Q ss_pred cccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 959 ATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
......++..|+|||++. ...++.++|||||||++|||++|+.||.... ......... .......
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~- 235 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--------PMRVLLKIA-KSEPPTL- 235 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc--------HHHHHHHHh-cCCCccC-
Confidence 223346888999999985 3456789999999999999999999986321 112222221 1111111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+.....++.+++.+|++.+|++||++.|++++
T Consensus 236 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 236 ------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred ------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1122344578999999999999999999999763
No 214
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=314.57 Aligned_cols=245 Identities=27% Similarity=0.403 Sum_probs=204.0
Q ss_pred ccccceecccCceEEEEEE-EcCCeEEEEEEeecCccc---cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 803 FNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQ---GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
|.-.+-||.|+||.||.|+ ..+...||||++.....+ ..+++..|++++++++|||++.+.|+|..+...|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 4455679999999999995 556899999999765443 356789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
| -||-.+++.-+ ..++.+.++..|+.+.+.||+|||+. +.||||||..|||+++.|.||++|||.|..+.+..
T Consensus 108 C-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn-- 180 (948)
T KOG0577|consen 108 C-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN-- 180 (948)
T ss_pred H-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCchh--
Confidence 9 56888887765 45788999999999999999999999 99999999999999999999999999998775443
Q ss_pred cccCcccCCCcccchhccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 959 ATTDVAGTFGYVAPEYAMT---CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.++||+.|||||++.. +.|+-|+||||+|+...|+..+++|... ++-..-... +.+++.+..
T Consensus 181 ---sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFn--------MNAMSALYH-IAQNesPtL--- 245 (948)
T KOG0577|consen 181 ---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN--------MNAMSALYH-IAQNESPTL--- 245 (948)
T ss_pred ---cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccC--------chHHHHHHH-HHhcCCCCC---
Confidence 4689999999999864 6799999999999999999999999752 222222222 223322211
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
. ..+++..+..++..|++.-|.+|||..+++++-
T Consensus 246 --q---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 246 --Q---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred --C---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 1 246788999999999999999999999988753
No 215
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1e-33 Score=320.22 Aligned_cols=237 Identities=26% Similarity=0.332 Sum_probs=190.8
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHH-HHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIR-TLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||+||+|... +|+.||+|++.... .....++.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999654 68999999986532 122344455544 56889999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|..++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~ 154 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTTS 154 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCccc
Confidence 9999999763 4689999999999999999999999 9999999999999999999999999998753222 12233
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|++.|+|||++.+..++.++|||||||++|||++|+.||... +..+......... . ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~--------~~~~~~~~i~~~~-~----------~~ 215 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--------DTAEMYDNILNKP-L----------RL 215 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC--------CHHHHHHHHHcCC-C----------CC
Confidence 457999999999999999999999999999999999999999632 2223333322211 0 01
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMR 1068 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ 1068 (1082)
+...+..+.+++.+|++.+|++||++.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 216 KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 123356789999999999999999874
No 216
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=6.7e-33 Score=305.29 Aligned_cols=252 Identities=22% Similarity=0.315 Sum_probs=193.3
Q ss_pred ceecccCceEEEEEEEcC---CeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 807 NCIGSGGFGATYKAEIIP---GVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
+.||+|+||.||+|.+.+ +..+|+|.+..... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999997643 46799998865432 33457889999999999999999999999999999999999999
Q ss_pred CHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc-
Q 045553 883 NLEKFIQDRP---RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH- 958 (1082)
Q Consensus 883 sL~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~- 958 (1082)
+|.++++... ....++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999997642 23567788889999999999999999 9999999999999999999999999999754332221
Q ss_pred cccCcccCCCcccchhcccC-------CCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 959 ATTDVAGTFGYVAPEYAMTC-------RVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
......++..|+|||++.+. .++.++||||||+++|||++ |+.||..... ..... ... .+...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-----~~~~~---~~~-~~~~~ 228 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD-----EQVLT---YTV-REQQL 228 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh-----HHHHH---HHh-hcccC
Confidence 12234578889999998642 35789999999999999996 9999863211 11111 111 11112
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
...++.+. ......+.+++.+|+ .+|++||++.||++.|+
T Consensus 229 ~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccC----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 22222221 123346888999999 68999999999998875
No 217
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.7e-33 Score=305.16 Aligned_cols=250 Identities=23% Similarity=0.382 Sum_probs=202.8
Q ss_pred CccccceecccCceEEEEEEEcCCeEEEEEEeecCcc------ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF------QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
+|++.+.||+|+||+||+|...+++.+|+|.+..... .....+.+|++++++++|+||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4788899999999999999888899999999865421 2235688999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 9999999999999764 4678999999999999999999999 9999999999999999999999999998765321
Q ss_pred C-----CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 956 E-----THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 956 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
. ........|+..|+|||++.+..++.++||||+|+++|||++|+.||.... ............+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~- 227 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD-------RLAAMFYIGAHRGLM- 227 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC-------hHHHHHHhhhccCCC-
Confidence 1 111223568899999999999889999999999999999999999996321 111111111111111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
+ ..+.....++..++.+|++.+|++||++.|+++
T Consensus 228 ----~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 ----P----RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ----C----CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 112234567899999999999999999999875
No 218
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.5e-33 Score=322.12 Aligned_cols=258 Identities=22% Similarity=0.316 Sum_probs=197.8
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccCC-----
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA----- 870 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 870 (1082)
..++|++.+.||+|+||.||+|.. .+|..||||++... .......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999964 46899999998643 2234567789999999999999999999886443
Q ss_pred -eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 871 -EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 871 -~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
..++||||++ +++.+.++. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 5799999995 567776643 478899999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHH------
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASML------ 1023 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 1023 (1082)
+..... .......||..|+|||++.+..++.++||||+||++|||++|+.||.... ....|....
T Consensus 171 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~-------~~~~~~~~~~~~~~~ 241 (359)
T cd07876 171 RTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD-------HIDQWNKVIEQLGTP 241 (359)
T ss_pred cccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHHhcCCC
Confidence 764322 22334578999999999999999999999999999999999999997431 111111111
Q ss_pred ---------------HhcCC-Cc-----cccccccC---CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1024 ---------------LLQGR-PC-----EFFTAGLW---DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1024 ---------------~~~~~-~~-----~~~d~~l~---~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..... .. +....... ...+......+.+++.+|++.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 242 SAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred cHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 00 00000000 00011224578999999999999999999999875
No 219
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.6e-33 Score=316.66 Aligned_cols=241 Identities=22% Similarity=0.296 Sum_probs=195.3
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.|++.+.||+|+||+||+|.. .+|+.||+|++.... ....+.+..|.++++... |++|+++.+++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 367889999999999999965 468999999987532 233456778888888886 567888999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 999999999998763 4689999999999999999999999 99999999999999999999999999987543222
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............ .
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--------~~~~~~~i~~~~-~------- 218 (323)
T cd05615 156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED--------EDELFQSIMEHN-V------- 218 (323)
T ss_pred -ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-C-------
Confidence 12234568999999999999999999999999999999999999997421 122222222211 1
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSM 1067 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 1067 (1082)
..+...+.++.+++.+|++.+|++|++.
T Consensus 219 ---~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 ---SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1233345678999999999999999974
No 220
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.8e-33 Score=307.07 Aligned_cols=247 Identities=28% Similarity=0.466 Sum_probs=202.1
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
.+|++.+.||+|+||.||+|.. +++.||+|.+.... ..+.+.+|+.++++++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4588999999999999999975 57889999986542 346788999999999999999999988654 4799999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+++|.+++.......+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~---- 154 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV---- 154 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC----
Confidence 99999999876556789999999999999999999998 99999999999999999999999999997643221
Q ss_pred cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 961 TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
.....+..|+|||++.+..++.++||||||+++|||++ |+.||... ....+.... ..+...
T Consensus 155 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~--------~~~~~~~~~-~~~~~~--------- 216 (254)
T cd05083 155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM--------SLKEVKECV-EKGYRM--------- 216 (254)
T ss_pred CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC--------CHHHHHHHH-hCCCCC---------
Confidence 12234568999999998899999999999999999997 88888632 122222222 222111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
..+...+..+.+++.+|++.+|++||+++++++.|++
T Consensus 217 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 217 EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 1122345678999999999999999999999999864
No 221
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.1e-33 Score=303.81 Aligned_cols=254 Identities=24% Similarity=0.381 Sum_probs=207.7
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
.++|++.+.||.|+||.||+|... +++.+|+|.+........+.+.+|++++++++|||++++++++......+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 357899999999999999999654 5788999999877666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+........
T Consensus 82 ~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 156 (262)
T cd06613 82 CGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA- 156 (262)
T ss_pred CCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhh-
Confidence 9999999998764 35689999999999999999999999 999999999999999999999999999976543221
Q ss_pred cccCcccCCCcccchhcccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 959 ATTDVAGTFGYVAPEYAMTC---RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
......++..|+|||.+.+. .++.++||||||+++|||++|+.||..... ..-.... ...... ..
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~--------~~~~~~~-~~~~~~---~~ 224 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP--------MRALFLI-SKSNFP---PP 224 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHH-HhccCC---Cc
Confidence 22335688899999999876 889999999999999999999999864221 1111111 111000 00
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.+ ..+...+.++.+++.+|++.+|.+||++.+|+.
T Consensus 225 ~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 225 KL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred cc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11 112345678999999999999999999999975
No 222
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.9e-33 Score=313.03 Aligned_cols=261 Identities=24% Similarity=0.306 Sum_probs=195.9
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhcc---CCCceeeEeeeecc-----CC
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRV---QHPNLVTLIGYHVS-----EA 870 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~~ 870 (1082)
+|++.+.||+|+||+||+|... +++.||+|.+..... .....+.+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888999999999999999654 689999999875422 2233456677766655 79999999998764 34
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
..++||||++ ++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccc
Confidence 5899999996 5899999876556689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC---
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG--- 1027 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 1027 (1082)
...... ......|+..|+|||++.+..++.++||||+||++|||++|+.||..... ........ ......
T Consensus 157 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~----~~~~~~~~-~~~~~~~~~ 229 (288)
T cd07863 157 IYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE----ADQLGKIF-DLIGLPPED 229 (288)
T ss_pred cccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH----HHHHHHHH-HHhCCCChh
Confidence 764322 22335689999999999998999999999999999999999999863211 11111111 111000
Q ss_pred -CCc------cccccccC---CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1028 -RPC------EFFTAGLW---DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1028 -~~~------~~~d~~l~---~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+.. ..+.+... .........++.+++.+|++.||++||++.|++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 00000000 00112335678899999999999999999999753
No 223
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.8e-33 Score=306.93 Aligned_cols=255 Identities=21% Similarity=0.310 Sum_probs=205.9
Q ss_pred cCccccceecccCceEEEEEEEc------CCeEEEEEEeecCccc-cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRFQ-GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
.+|++.+.||+|+||.||+|+.. +.+.||+|.+...... ..+.+.+|++++++++|+|++++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46888899999999999999754 2467999988654433 4577999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeec
Q 045553 874 LIYNYLPGGNLEKFIQDRPR-------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDF 946 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 946 (1082)
+||||+++++|.++++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999986542 2689999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 947 GLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 947 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
|++...............++..|+|||.+.+..++.++||||||+++|+|++ |..||.... ........ .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~--------~~~~~~~~-~ 232 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS--------DEEVLNRL-Q 232 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc--------hHHHHHHH-H
Confidence 9987554333333334456788999999988889999999999999999998 777875221 11222221 1
Q ss_pred cCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1026 QGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1026 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
.+... . ..+...+..+.+++.+|++.+|++||++.|++++|+
T Consensus 233 ~~~~~-~-------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 AGKLE-L-------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred cCCcC-C-------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 11111 0 112234468999999999999999999999999886
No 224
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.4e-33 Score=319.35 Aligned_cols=240 Identities=25% Similarity=0.298 Sum_probs=190.8
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHH-HHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEI-RTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|+.. +++.||+|++..... .....+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999654 578899999875321 2223344444 456888999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
++|.+++... ..+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~~~ 154 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTTS 154 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CCcc
Confidence 9999999863 4678889999999999999999999 99999999999999999999999999997543222 2233
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|++.|+|||++.+..++.++||||+||++|||++|+.||... ...+......... . ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--------~~~~~~~~i~~~~-~----------~~ 215 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--------NTAEMYDNILNKP-L----------QL 215 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCC--------CHHHHHHHHHhCC-c----------CC
Confidence 457999999999999999999999999999999999999999632 1222222222211 0 11
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMRQVA 1071 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ev~ 1071 (1082)
+......+.+++.+|++.+|.+||++.+.+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 216 KPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 223456789999999999999999876443
No 225
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.6e-33 Score=309.46 Aligned_cols=250 Identities=22% Similarity=0.408 Sum_probs=206.3
Q ss_pred cCccccceecccCceEEEEEE-EcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.+|++.+.||.|+||.||+|. ..+++.||+|.+........+.+.+|+..++.++|||++++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 468999999999999999995 4568999999997665556678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........ .
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~ 171 (296)
T cd06655 99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-K 171 (296)
T ss_pred CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc-c
Confidence 999999998753 589999999999999999999999 999999999999999999999999999876543322 2
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
.....|+..|+|||.+.+..++.++|||||||++|+|++|+.||.... ...........+ ....
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~--------~~~~~~~~~~~~-~~~~------- 235 (296)
T cd06655 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN--------PLRALYLIATNG-TPEL------- 235 (296)
T ss_pred CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhcC-Cccc-------
Confidence 223468889999999998889999999999999999999999996421 111111111111 1110
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+||+.+|++||++.+|+.+
T Consensus 236 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 236 QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 1123345578899999999999999999999753
No 226
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=9.8e-33 Score=304.03 Aligned_cols=254 Identities=23% Similarity=0.436 Sum_probs=203.9
Q ss_pred CccccceecccCceEEEEEEEcC--CeEEEEEEeecCc----------cccHHHHHHHHHHHhc-cCCCceeeEeeeecc
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIP--GVVVAVKRLSVGR----------FQGVQQFAAEIRTLGR-VQHPNLVTLIGYHVS 868 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~--~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 868 (1082)
+|++.+.||+|+||.||+|.... ++.+|+|.+.... .....++..|+.++.+ ++|||++++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999997654 6889999885431 2234556778887764 799999999999999
Q ss_pred CCeEEEEEeecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeec
Q 045553 869 EAEMFLIYNYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDF 946 (1082)
Q Consensus 869 ~~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 946 (1082)
.+..++||||+++++|.+++... ....+++..+++++.|++.|+.|||+.. +++||||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999988542 2456899999999999999999999632 8999999999999999999999999
Q ss_pred ccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 947 GLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 947 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
|.+....... ......|+..|+|||+..+..++.++||||||+++|||++|+.||... .......... .
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~--------~~~~~~~~~~-~ 227 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST--------NMLSLATKIV-E 227 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc--------CHHHHHHHHh-h
Confidence 9998765433 334456899999999999988999999999999999999999998632 1222222222 1
Q ss_pred CCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1027 GRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1027 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
+..... ........+.+++.+|++.+|++||++.||.+++++
T Consensus 228 ~~~~~~--------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 228 AVYEPL--------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred ccCCcC--------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 111111 111234678999999999999999999999999863
No 227
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=8.2e-33 Score=302.47 Aligned_cols=251 Identities=28% Similarity=0.486 Sum_probs=205.1
Q ss_pred ccccceecccCceEEEEEEEcC-----CeEEEEEEeecCccc-cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 803 FNVQNCIGSGGFGATYKAEIIP-----GVVVAVKRLSVGRFQ-GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
+++.+.||+|+||.||+|...+ +..||+|++...... ..+.+..|++.+++++|+|++++++++.+.+..++||
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999997653 388999999765433 5678999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++++|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+.......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 999999999999875443389999999999999999999999 99999999999999999999999999998775543
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
........++..|+|||.+.+..++.++||||+|+++|||++ |..||... .......... .+...
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~--------~~~~~~~~~~-~~~~~----- 223 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM--------SNEEVLEYLK-KGYRL----- 223 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHh-cCCCC-----
Confidence 332222347789999999988889999999999999999998 77777531 2222222222 11111
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
..+...+.++.+++.+|++.+|++|||+.|+++.|
T Consensus 224 ----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 ----PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ----CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11223456899999999999999999999998764
No 228
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.1e-33 Score=313.52 Aligned_cols=261 Identities=21% Similarity=0.311 Sum_probs=199.2
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56899999999999999999654 578999999875432 2334677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 159 (309)
T cd07872 86 LD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK- 159 (309)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc-
Confidence 96 5898888765 34588999999999999999999999 999999999999999999999999999976543222
Q ss_pred cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC--------
Q 045553 959 ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP-------- 1029 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 1029 (1082)
......++..|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+.........
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-----DELHLIFRLLGTPTEETWPGISS 234 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCCHHHHhhhcc
Confidence 2223467899999998865 56889999999999999999999999643211 111111111000000
Q ss_pred -ccccccccCCC-------CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1030 -CEFFTAGLWDC-------GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1030 -~~~~d~~l~~~-------~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.+..+...... .....+.++.+++.+|++.||.+|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000000000 01123457889999999999999999999987
No 229
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.8e-33 Score=321.26 Aligned_cols=258 Identities=22% Similarity=0.296 Sum_probs=198.5
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccC------
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------ 869 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 869 (1082)
...+|++.+.||+|+||.||+|.. ..++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 457899999999999999999954 468999999986542 23346678899999999999999999987643
Q ss_pred CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
...++||||++ +++.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCccc
Confidence 35799999995 577777653 478899999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH-------
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM------- 1022 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~------- 1022 (1082)
+..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||.... ....+...
T Consensus 167 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-------~~~~~~~~~~~~~~~ 237 (355)
T cd07874 167 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD-------YIDQWNKVIEQLGTP 237 (355)
T ss_pred ccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHHHhCCC
Confidence 865332 22334578999999999999999999999999999999999999996421 11111111
Q ss_pred --------------HHhcC-CCccccccc-----cC---CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1023 --------------LLLQG-RPCEFFTAG-----LW---DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1023 --------------~~~~~-~~~~~~d~~-----l~---~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..... .......+. .. ...+......+.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred CHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000 000000000 00 00112234578999999999999999999999985
No 230
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.1e-33 Score=320.37 Aligned_cols=238 Identities=26% Similarity=0.345 Sum_probs=190.8
Q ss_pred ceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHH-HHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIR-TLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||+||+|+. .+|+.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999964 468999999986532 223344555554 46789999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|..++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~ 154 (325)
T cd05604 81 GELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTT 154 (325)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCcc
Confidence 999998876 34689999999999999999999999 9999999999999999999999999998753221 12233
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|++.|+|||++.+..++.++|||||||++|||++|+.||... +..+......... . ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~--------~~~~~~~~~~~~~-~----------~~ 215 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR--------DVAEMYDNILHKP-L----------VL 215 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC--------CHHHHHHHHHcCC-c----------cC
Confidence 457999999999999999999999999999999999999999632 2222222222211 1 01
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMRQ 1069 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~e 1069 (1082)
+......+.+++.+|++.+|.+||++.+
T Consensus 216 ~~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 216 RPGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred CCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 1234457889999999999999998754
No 231
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.6e-33 Score=308.61 Aligned_cols=253 Identities=30% Similarity=0.496 Sum_probs=202.8
Q ss_pred ccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHH--HHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 803 FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQ--QFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
|++.+.||+|+||+||+|+.. +++.||+|++......... ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 678899999999999999765 4678999999877543322 3456999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++.. ...+++..+..++.|+++||++||+. +|+||||||+||++++++.++|+|||.+.... .....
T Consensus 81 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNEN 154 (260)
T ss_dssp TTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST-STTSE
T ss_pred ccccccccccc--cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-ccccc
Confidence 99999999983 35689999999999999999999999 99999999999999999999999999998652 22233
Q ss_pred ccCcccCCCcccchhcc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAM-TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||++. +..++.++||||+|+++|+|++|+.||.... ..+............ ... ...
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~-~~~----~~~ 224 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN-----SDDQLEIIEKILKRP-LPS----SSQ 224 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS-----HHHHHHHHHHHHHTH-HHH----HTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc-----chhhhhhhhhccccc-ccc----ccc
Confidence 44567899999999998 8889999999999999999999999987431 111112221111111 000 000
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
........+.+++.+|++.+|++||++.+++++
T Consensus 225 --~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 225 --QSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp --SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred --ccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 001123789999999999999999999999863
No 232
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=5.3e-33 Score=315.07 Aligned_cols=257 Identities=19% Similarity=0.259 Sum_probs=196.0
Q ss_pred ccceeccc--CceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 805 VQNCIGSG--GFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 805 ~~~~lg~G--~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
+.++||+| +|++||++.. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 7899999954 568999999987543 233456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc-
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH- 958 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~- 958 (1082)
++|+|.+++..+....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+.........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999999765455689999999999999999999999 9999999999999999999999999875433211110
Q ss_pred -----cccCcccCCCcccchhccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 959 -----ATTDVAGTFGYVAPEYAMT--CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 959 -----~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||...... +...... .+....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~-~~~~~~ 229 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT--------QMLLEKL-NGTVPC 229 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh--------HHHHHHh-cCCccc
Confidence 1112346778999999976 46889999999999999999999999642110 1111110 111111
Q ss_pred cccc-------------------cc-----------------CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 FFTA-------------------GL-----------------WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~d~-------------------~l-----------------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.++. .. ...........+.+++.+|++.||++|||+.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 230 LLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 1000 00 000112334678999999999999999999999863
No 233
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.8e-33 Score=317.77 Aligned_cols=255 Identities=22% Similarity=0.296 Sum_probs=201.1
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.++||+|+||+||+|+.. +++.||+|++.... ......+.+|+.++..++|++|+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36889999999999999999765 47889999986421 223345788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.++++.. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 999999999999864 34689999999999999999999999 99999999999999999999999999997654333
Q ss_pred CccccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 957 THATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
........||+.|+|||++. ...++.++|||||||++|||++|+.||... +..+.............
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~--------~~~~~~~~i~~~~~~~~ 228 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE--------SLVETYGKIMNHKERFQ 228 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC--------CHHHHHHHHhCCCcccc
Confidence 33333457999999999986 346788999999999999999999999632 23333333322211111
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSS--RPSMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~ev~~~ 1073 (1082)
. . ......+.++.+++.+|+..++++ ||++.|++++
T Consensus 229 ~-p-----~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 F-P-----AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred C-C-----CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0 0 011234567888899988665554 7899999776
No 234
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.3e-33 Score=318.20 Aligned_cols=255 Identities=21% Similarity=0.290 Sum_probs=201.1
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+|..++...+|++|+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36899999999999999999754 57899999986421 233455788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999999864 34689999999999999999999999 99999999999999999999999999998765443
Q ss_pred CccccCcccCCCcccchhccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 957 THATTDVAGTFGYVAPEYAMT-----CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
........|++.|+|||++.+ +.++.++|||||||++|||++|+.||... +..+.............
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~--------~~~~~~~~i~~~~~~~~ 228 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE--------SLVETYGKIMNHEERFQ 228 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC--------CHHHHHHHHHcCCCccc
Confidence 333334579999999999875 46788999999999999999999999632 12222222222111110
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSS--RPSMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~ev~~~ 1073 (1082)
+.. .....+.++.+++.+|+...+++ |+++.++.++
T Consensus 229 -~p~-----~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 -FPS-----HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred -CCC-----ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 000 01123467888999998876554 5688888754
No 235
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.6e-33 Score=323.61 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=197.6
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
+|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++..++||+|+++++++.+.+..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 6888999999999999999654 68999999986432 2345667889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 82 FLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred CCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 99999999999763 4689999999999999999999999 999999999999999999999999999875422100
Q ss_pred ----------------------------------ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 045553 958 ----------------------------------HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKAL 1003 (1082)
Q Consensus 958 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~ 1003 (1082)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0112357999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 045553 1004 DPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS---MRQVAQQ 1073 (1082)
Q Consensus 1004 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt---~~ev~~~ 1073 (1082)
.... ................ +.+ ......++.+++.+++ .+|++|++ +.|+.++
T Consensus 237 ~~~~--------~~~~~~~i~~~~~~~~-~p~------~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 237 CSET--------PQETYRKVMNWKETLV-FPP------EVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCC--------HHHHHHHHHcCCCcee-cCC------CCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 6421 1222222221111000 000 1123456778888866 49999985 6666654
No 236
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.6e-33 Score=305.83 Aligned_cols=255 Identities=25% Similarity=0.466 Sum_probs=206.1
Q ss_pred cCccccceecccCceEEEEEEEcC-C----eEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIP-G----VVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~-~----~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.+|++.+.||+|+||.||+|...+ | ..||+|....... ....++.+|+..+++++|||++++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 568889999999999999997542 3 3689998865543 345678899999999999999999999887 78999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++|+|.++++.. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 86 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 99999999999999875 34589999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 955 SETHA-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 955 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
..... .....++..|+|||.+....++.++||||||+++||+++ |+.||+.. ...++..... .+...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--------~~~~~~~~~~-~~~~~-- 230 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI--------PAVEIPDLLE-KGERL-- 230 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC--------CHHHHHHHHh-CCCCC--
Confidence 33221 112234568999999988899999999999999999998 99998632 2223322222 22111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+......+.+++.+||..+|.+||++.++++.|+++.
T Consensus 231 -------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05057 231 -------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMA 269 (279)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 112234457889999999999999999999999999864
No 237
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.4e-33 Score=337.75 Aligned_cols=261 Identities=26% Similarity=0.369 Sum_probs=202.9
Q ss_pred HHhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeecc--CCeE
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS--EAEM 872 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 872 (1082)
....+|.+.+.||+|+||+||+|... ++..||+|.+.... ......|..|+.++++++||||+++++++.. ...+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34568999999999999999999654 57889999987542 2345678899999999999999999998754 4578
Q ss_pred EEEEeecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCC----CCeEeccCCCCCEEEcCC--------
Q 045553 873 FLIYNYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECV----PRVLHRDIKPSNILLDNN-------- 938 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~----~~ivH~Dlk~~Nill~~~-------- 938 (1082)
|+||||+++|+|.+++.... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 99999999999999997632 3469999999999999999999998521 259999999999999642
Q ss_pred ---------CcEEEeecccceecCCCCCccccCcccCCCcccchhccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCc
Q 045553 939 ---------LNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMT--CRVSDKADVYSFGVVLLELISDKKALDPSF 1007 (1082)
Q Consensus 939 ---------~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGvll~elltg~~p~~~~~ 1007 (1082)
..+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~- 246 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA- 246 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC-
Confidence 348999999998764322 2234579999999999854 45889999999999999999999999632
Q ss_pred cCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHH--HHHhhhC
Q 045553 1008 CSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVA--QQLKQIQ 1078 (1082)
Q Consensus 1008 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~--~~L~~i~ 1078 (1082)
....+++... ..+... . ....+.++.+|+..||+.+|++||++.|++ ..+..+.
T Consensus 247 ------~~~~qli~~l-k~~p~l-----p-----i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 247 ------NNFSQLISEL-KRGPDL-----P-----IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302 (1021)
T ss_pred ------CcHHHHHHHH-hcCCCC-----C-----cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence 1223333222 221100 0 012346789999999999999999999998 3454443
No 238
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5e-33 Score=306.84 Aligned_cols=239 Identities=23% Similarity=0.303 Sum_probs=189.0
Q ss_pred eecccCceEEEEEEEcC-------------------------CeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeE
Q 045553 808 CIGSGGFGATYKAEIIP-------------------------GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTL 862 (1082)
Q Consensus 808 ~lg~G~~g~Vy~a~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 862 (1082)
.||+|+||.||+|.+.. ...||+|++..........|.+|+++++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999996421 24589998865544445678899999999999999999
Q ss_pred eeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC---
Q 045553 863 IGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL--- 939 (1082)
Q Consensus 863 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~--- 939 (1082)
++++......++||||+++|+|..++... ...+++..+.+++.|+++||+|||+. +|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999998754 34688999999999999999999999 999999999999997643
Q ss_pred ----cEEEeecccceecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHH-hCCCCCCCCccCCCCC
Q 045553 940 ----NAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELI-SDKKALDPSFCSFGNG 1013 (1082)
Q Consensus 940 ----~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~ell-tg~~p~~~~~~~~~~~ 1013 (1082)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||......
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---- 228 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS---- 228 (274)
T ss_pred CccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH----
Confidence 4899999988643221 12357788999998865 56899999999999999984 788888643211
Q ss_pred ccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1014 FNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
....+ ..... ..+......+.+++.+||+.+|++||+|.+|++.|+
T Consensus 229 -~~~~~----~~~~~-----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 229 -EKERF----YEKKH-----------RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred -HHHHH----HHhcc-----------CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11111 11110 011112346899999999999999999999999874
No 239
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-33 Score=323.43 Aligned_cols=260 Identities=22% Similarity=0.276 Sum_probs=199.7
Q ss_pred hcCccccceecccCceEEEEEEEc---CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII---PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
..+|.+.+.||+|+||.||+|... .+..||+|.+... +...+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 357999999999999999999643 3578999987643 23568999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
|++ +++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 166 e~~-~~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKY-KCDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 999 4789888854 45789999999999999999999999 99999999999999999999999999997664432
Q ss_pred Cc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc---
Q 045553 957 TH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF--- 1032 (1082)
Q Consensus 957 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 1032 (1082)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+...++. .... ..+.
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~l~~i~~~-~~~~-~~~~~~~ 316 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS-SSSQLRSIIRC-MQVH-PLEFPQN 316 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC-cHHHHHHHHHH-hccC-ccccCCc
Confidence 22 2234679999999999999999999999999999999999999996543210 01111111110 0000 0000
Q ss_pred -----------cccccCCCC--C-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 -----------FTAGLWDCG--P-----HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 -----------~d~~l~~~~--~-----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+....+..+ + .....++..++.+|+..+|++||++.|++.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 0 1224568889999999999999999999865
No 240
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.1e-33 Score=317.53 Aligned_cols=237 Identities=27% Similarity=0.361 Sum_probs=190.1
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHH-HHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIR-TLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|+.. +++.||+|++..... .....+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999754 588999999865321 22334555554 67889999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
++|..++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~ 154 (321)
T cd05603 81 GELFFHLQR--ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTS 154 (321)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Cccc
Confidence 999988876 34688899999999999999999999 99999999999999999999999999987532222 2233
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|++.|+|||++.+..++.++|||||||++|||++|+.||... +..+......... . ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--------~~~~~~~~i~~~~-~----------~~ 215 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR--------DVSQMYDNILHKP-L----------QL 215 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC--------CHHHHHHHHhcCC-C----------CC
Confidence 457899999999999989999999999999999999999999632 2223333322211 0 12
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMR 1068 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ 1068 (1082)
+......+.+++.+|++.+|.+||+..
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 216 PGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 233456789999999999999999753
No 241
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.2e-33 Score=309.33 Aligned_cols=247 Identities=24% Similarity=0.391 Sum_probs=202.1
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.|+..+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|++++++++||||+++++++......++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 466778899999999999964 457899999987443 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++.. ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++++|||++........ .
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~ 157 (277)
T cd06642 85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-K 157 (277)
T ss_pred CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch-h
Confidence 99999999864 4688999999999999999999999 999999999999999999999999999976643222 2
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
.....|+..|+|||++.+..++.++||||||+++|||++|+.|+...... .+... ...+.. +
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~~-~~~~~~-----~---- 219 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--------RVLFL-IPKNSP-----P---- 219 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh--------hHHhh-hhcCCC-----C----
Confidence 22346788999999999989999999999999999999999998632211 11111 111111 1
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+..+.+++.+|++.+|++||+|.||+++
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 220 TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1122345678999999999999999999999974
No 242
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=5.5e-33 Score=307.95 Aligned_cols=253 Identities=24% Similarity=0.395 Sum_probs=206.3
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
.++|++.+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++|||++++++++..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356899999999999999999764 6899999999876666667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++... ...+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||.+........
T Consensus 84 ~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (280)
T cd06611 84 CDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ- 158 (280)
T ss_pred cCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccccc-
Confidence 9999999998764 34689999999999999999999999 999999999999999999999999999876533222
Q ss_pred cccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 959 ATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
......|+..|+|||++. +..++.++||||||+++|||++|+.||.... ..+.+... ..+.....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~--------~~~~~~~~-~~~~~~~~- 228 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN--------PMRVLLKI-LKSEPPTL- 228 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC--------HHHHHHHH-hcCCCCCc-
Confidence 223346889999999975 3456789999999999999999999986421 11222222 11111111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+.++.+++.+|++.+|++||++.+|+++
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 ------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 1122345678899999999999999999999875
No 243
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1e-32 Score=301.86 Aligned_cols=248 Identities=27% Similarity=0.408 Sum_probs=203.8
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-----cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-----FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
+|+..+.||+|+||.||+|... ++..||+|.+.... .+..+.+.+|+++++.++|+|++++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4778899999999999999765 78999999986543 23456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.+||+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 9999999999999864 3588999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCccccCcccCCCcccchhcccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCR-VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
. ......|+..|+|||.+.... ++.++|+||||+++|+|++|+.||.... ...............
T Consensus 156 ~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~~---- 221 (258)
T cd06632 156 S--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE--------GVAAVFKIGRSKELP---- 221 (258)
T ss_pred c--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc--------HHHHHHHHHhcccCC----
Confidence 2 223456889999999988766 8999999999999999999999987432 112222211111111
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+|++.+|++||++.+++.+
T Consensus 222 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 222 -----PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred -----CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 1122345678899999999999999999999753
No 244
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.4e-33 Score=313.19 Aligned_cols=257 Identities=25% Similarity=0.436 Sum_probs=203.2
Q ss_pred hcCccccceecccCceEEEEEEEc-CCe----EEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGV----VVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
..+|+..+.||+|+||.||+|.+. +|. .||+|.+..... ....++.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 346788899999999999999653 343 578888865432 3344688999999999999999999998754 567
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+++||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 85 ~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccccc
Confidence 999999999999999865 34688999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 954 TSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 954 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
..... ......++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..++. .....+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--------~~~~~-~~~~~~~~~- 230 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--------TREIP-DLLEKGERL- 230 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHH-HHHHCCCCC-
Confidence 33221 2223345778999999999999999999999999999997 888886321 11111 122222111
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..+..+...+.+++.+||..+|++||++.++++.|+++..
T Consensus 231 --------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 231 --------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1112334578999999999999999999999999998653
No 245
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.1e-32 Score=303.40 Aligned_cols=248 Identities=24% Similarity=0.421 Sum_probs=201.4
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCccc---------cHHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQ---------GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
+|.+.+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 477889999999999999964 45889999988654321 12567889999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999999764 4688899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-----ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 952 LGTSET-----HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 952 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
...... .......|+..|+|||.+.+..++.++||||+|+++|+|++|+.||.... . ..-+... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~-~~~~~~~-~~ 226 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT-------Q-LQAIFKI-GE 226 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc-------H-HHHHHHH-hc
Confidence 642211 11123458889999999998889999999999999999999999996421 1 1111111 11
Q ss_pred CCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1027 GRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1027 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
. .....+...+..+.+++.+|++.+|++||++.||++
T Consensus 227 ~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 N---------ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred c---------CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1 011122344568899999999999999999999986
No 246
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3.6e-36 Score=328.44 Aligned_cols=385 Identities=23% Similarity=0.323 Sum_probs=250.6
Q ss_pred CCCCCEEEcccCCCc-ccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEE
Q 045553 109 LTQLRVLLLAFNGFS-GELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVV 187 (1082)
Q Consensus 109 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 187 (1082)
|+-.+-.|+++|.++ +..|.....+++++.|.|...++. .+|+.++.|.+|++|.+++|++. .+-..++.|+.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 444555666666666 356666666666666666666666 66666666666666666666666 455566666666666
Q ss_pred EcccCccc-ccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCc
Q 045553 188 SLSFNLLS-GSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNF 266 (1082)
Q Consensus 188 ~L~~N~l~-~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 266 (1082)
++..|++. .-+|..++ .+..|+.|+|++|+++ ..|..+...+++-.|+||+|+|..+....|.+|+.|-.||||+|+
T Consensus 84 ~~R~N~LKnsGiP~diF-~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIF-RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred hhhccccccCCCCchhc-ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccch
Confidence 66666655 23455555 3666666666666666 666666666777777777777764333455667777777777777
Q ss_pred CcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcc-cCCCC
Q 045553 267 LSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNL-EGIFP 345 (1082)
Q Consensus 267 l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l-~~~~~ 345 (1082)
+. .+|..+.++..|++|.|++|++..++. ..+..|+.|+.|.+++.+- ..-+|
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~hfQL-------------------------rQLPsmtsL~vLhms~TqRTl~N~P 215 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLNHFQL-------------------------RQLPSMTSLSVLHMSNTQRTLDNIP 215 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhhHHHH-------------------------hcCccchhhhhhhcccccchhhcCC
Confidence 76 566666677777777776665543321 1122233344444444321 12234
Q ss_pred cccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcceecCCCCCCccccc
Q 045553 346 QNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLSGEIPRISHSECSK 425 (1082)
Q Consensus 346 ~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~ 425 (1082)
..+..+.+|..+|||.|.+. .+|+.+.++++|+.|+||+|+|+..-.
T Consensus 216 tsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~-------------------------------- 262 (1255)
T KOG0444|consen 216 TSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNM-------------------------------- 262 (1255)
T ss_pred CchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeec--------------------------------
Confidence 44555555555555555555 555555555555555555555541100
Q ss_pred ccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCcc
Q 045553 426 MSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKG 505 (1082)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~ 505 (1082)
T Consensus 263 -------------------------------------------------------------------------------- 262 (1255)
T KOG0444|consen 263 -------------------------------------------------------------------------------- 262 (1255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCC-CCCc
Q 045553 506 NLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQ-GPLP 584 (1082)
Q Consensus 506 ~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p 584 (1082)
.+.. -.+|+.|+||.|+++ ..|.+++++++|+.|++.+|++. .-+|
T Consensus 263 ---------------------------~~~~-----W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiP 309 (1255)
T KOG0444|consen 263 ---------------------------TEGE-----WENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIP 309 (1255)
T ss_pred ---------------------------cHHH-----Hhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCc
Confidence 0000 023777888888887 66888999999999999999886 3478
Q ss_pred ccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCc
Q 045553 585 SYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSS 664 (1082)
Q Consensus 585 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 664 (1082)
..++.|.+|+.+..++|++. .+|+.+..|..|+.|.|++|++. .+|+.+.-|+.|+.|||.+|.---.+|.--..-++
T Consensus 310 SGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~ 387 (1255)
T KOG0444|consen 310 SGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKK 387 (1255)
T ss_pred cchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCcchhhhc
Confidence 88999999999999999998 88999999999999999999988 78888988999999999998766455554333455
Q ss_pred ccEEecc
Q 045553 665 LSIFDVS 671 (1082)
Q Consensus 665 L~~l~ls 671 (1082)
|..-++.
T Consensus 388 lefYNID 394 (1255)
T KOG0444|consen 388 LEFYNID 394 (1255)
T ss_pred ceeeecc
Confidence 5554443
No 247
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=4.6e-33 Score=307.57 Aligned_cols=249 Identities=25% Similarity=0.434 Sum_probs=205.4
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++|++.+.||.|+||.||+|... +++.||+|.+.... ......+.+|+++++.++|+|++++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36888899999999999999654 68999999987653 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.++++.. .+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||+++.......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 153 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS- 153 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccccc-
Confidence 9999999999864 689999999999999999999999 999999999999999999999999999987754322
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
......|+..|+|||+..+..++.++||||||+++|||++|+.||..... ..... .+..+......+
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~--------~~~~~-~~~~~~~~~~~~---- 220 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP--------MRVLF-LIPKNNPPSLEG---- 220 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch--------HHHHH-HhhhcCCCCCcc----
Confidence 22334688899999999998899999999999999999999999964321 11111 111221111111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...+..+.+++.+|+..+|++||++.+++++
T Consensus 221 ----~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 221 ----NKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ----cccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 0144578899999999999999999999764
No 248
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1e-32 Score=301.52 Aligned_cols=249 Identities=24% Similarity=0.414 Sum_probs=205.0
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|++.+.||+|+||.||+|.. .++..+|+|.+.... ....+.+.+|++++++++|||++++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 478889999999999999964 468899999987543 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC-CcEEEeecccceecCCCCC
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN-LNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla~~~~~~~~ 957 (1082)
+++++|.+++.......+++..+.+++.|++.|++|||+. +++||||+|+||+++++ +.+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 9999999999876556789999999999999999999999 99999999999999865 4689999999987643322
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
.....|+..|+|||.+.+..++.++||||||+++|+|++|+.||... +....+....... ..
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~--------~~~~~~~~~~~~~-~~------- 219 (256)
T cd08220 158 --AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA--------NLPALVLKIMSGT-FA------- 219 (256)
T ss_pred --ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC--------chHHHHHHHHhcC-CC-------
Confidence 22346889999999999888999999999999999999999998632 1222222222211 11
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+.++.+++.+||+.+|++|||+.|++++
T Consensus 220 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 --PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred --CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1122345678999999999999999999999864
No 249
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.2e-33 Score=307.92 Aligned_cols=249 Identities=26% Similarity=0.437 Sum_probs=198.9
Q ss_pred ceecccCceEEEEEEEcC-------CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 807 NCIGSGGFGATYKAEIIP-------GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+.||+|+||.||+|+..+ +..||+|.+.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999997542 2579999886543 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-----cEEEeeccc
Q 045553 879 LPGGNLEKFIQDRP-----RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL-----NAYLSDFGL 948 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-----~~kl~DfGl 948 (1082)
+++++|.++++... ...+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 23478999999999999999999998 999999999999999877 899999999
Q ss_pred ceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 949 ARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 949 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
++........ ......++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+..... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~--------~~~~~~~~-~~ 228 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN--------NQEVLQHV-TA 228 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC--------HHHHHHHH-hc
Confidence 9765433221 1222345678999999999999999999999999999998 999886321 11221211 11
Q ss_pred CCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1027 GRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1027 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
+... ..+...+..+.+++.+|++.+|++||++.+|.+.|++
T Consensus 229 ~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 229 GGRL---------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred CCcc---------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1111 1223445688999999999999999999999999864
No 250
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.5e-33 Score=307.98 Aligned_cols=259 Identities=25% Similarity=0.378 Sum_probs=207.6
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
.+|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.....+++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46888899999999999999654 58899999886543 33457789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++... ..+++..+..++.+++.|+.|||+.. +++||||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-- 158 (284)
T cd06620 85 MDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-- 158 (284)
T ss_pred CCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--
Confidence 9999999998763 46899999999999999999999732 89999999999999999999999999987543221
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCC---CCccHHHHHHHHHhcCCCcccccc
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFG---NGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.....|+..|+|||++.+..++.++|||||||++|+|++|+.||+......+ .......+......+.. .
T Consensus 159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----- 231 (284)
T cd06620 159 -ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP-P----- 231 (284)
T ss_pred -cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC-C-----
Confidence 2235689999999999888999999999999999999999999975432111 11122233333222211 1
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
.+ .....+.++.+++.+|++.+|++||++.||+++..
T Consensus 232 ~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 232 RL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred CC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 00 11124567899999999999999999999998743
No 251
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.6e-33 Score=309.62 Aligned_cols=262 Identities=23% Similarity=0.355 Sum_probs=204.6
Q ss_pred cHHHHHHHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeec--
Q 045553 792 TYENVVRATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHV-- 867 (1082)
Q Consensus 792 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~-- 867 (1082)
.++.+..++++|++.+.||+|+||.||+|.. .+++.+|+|++.... ....++.+|+.+++++ +|||++++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 3455666888999999999999999999965 457899999876432 2345678899999999 6999999999874
Q ss_pred ---cCCeEEEEEeecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEE
Q 045553 868 ---SEAEMFLIYNYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAY 942 (1082)
Q Consensus 868 ---~~~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 942 (1082)
.+...++||||+++++|.++++.. ....+++..+..++.|+++|+.|||+. +|+||||||+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEE
Confidence 345789999999999999988642 245688999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCccccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHH
Q 045553 943 LSDFGLARLLGTSETHATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIV 1017 (1082)
Q Consensus 943 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~ 1017 (1082)
|+|||+++....... ......|+..|+|||++. +..++.++||||+||++|||++|+.||..... ..
T Consensus 165 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~-------~~ 236 (286)
T cd06638 165 LVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP-------MR 236 (286)
T ss_pred EccCCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch-------hH
Confidence 999999987643222 223346899999999875 34578899999999999999999999864311 11
Q ss_pred HHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1018 AWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1018 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
.... .......... .+.....++..++.+|++.+|++||++.||+++.
T Consensus 237 ~~~~--~~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 237 ALFK--IPRNPPPTLH-------QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred HHhh--ccccCCCccc-------CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1111 0111111111 1122345799999999999999999999998763
No 252
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1e-32 Score=305.14 Aligned_cols=248 Identities=23% Similarity=0.363 Sum_probs=204.9
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..|+..+.||.|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++|||++++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 35778889999999999999754 58999999987543 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++.. ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06640 84 LGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCcc-
Confidence 999999999875 3588899999999999999999999 999999999999999999999999999987643322
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
......++..|+|||++.+..++.++|||||||++|||++|+.||...... ...... ..+. .
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~~~-~~~~---------~ 218 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM--------RVLFLI-PKNN---------P 218 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH--------hHhhhh-hcCC---------C
Confidence 222346788999999999888999999999999999999999998643211 111111 1111 1
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...+...+..+.+++.+|++.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 219 PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 12234566789999999999999999999999775
No 253
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=8.5e-33 Score=312.33 Aligned_cols=195 Identities=26% Similarity=0.435 Sum_probs=161.9
Q ss_pred cceecccCceEEEEEEEc---CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeecc--CCeEEEEEeecC
Q 045553 806 QNCIGSGGFGATYKAEII---PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS--EAEMFLIYNYLP 880 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lV~E~~~ 880 (1082)
.++||+|+||+||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.. ....++||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~- 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA- 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc-
Confidence 367999999999999754 46889999986543 23457889999999999999999998854 45689999999
Q ss_pred CCCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE----cCCCcEEEeecccc
Q 045553 881 GGNLEKFIQDRP-------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL----DNNLNAYLSDFGLA 949 (1082)
Q Consensus 881 ~gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~DfGla 949 (1082)
+++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 468888876421 23589999999999999999999999 99999999999999 45678999999999
Q ss_pred eecCCCCC--ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 045553 950 RLLGTSET--HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPS 1006 (1082)
Q Consensus 950 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~ 1006 (1082)
+.+..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 87653322 12334678999999999977 45889999999999999999999999743
No 254
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=6.2e-33 Score=308.42 Aligned_cols=262 Identities=25% Similarity=0.373 Sum_probs=199.1
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|++.+.||+|++|.||+|+.. ++..||+|++.... ....+.+.+|+.++++++|||++++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999754 68999999986542 22346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 879 LPGGNLEKFIQDRP-RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
++ ++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 96 68999887643 35789999999999999999999999 999999999999999999999999999986543321
Q ss_pred ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-----------
Q 045553 958 HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL----------- 1025 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 1025 (1082)
......+++.|+|||++.+ ..++.++||||||+++|||++|+.||...... ............
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 157 -VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI----DQLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred -cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHHHhCCCChhhhhcchh
Confidence 2223357889999998865 45788999999999999999999998643110 000000000000
Q ss_pred ----cCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1026 ----QGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 ----~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
............ .......+.++.+++.+|++.||++|||+.+|+.+
T Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 232 LPDYKNTFPKWKKGSL-RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hHHHHhhccccCcchh-HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000000000 00111235678899999999999999999999753
No 255
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8e-33 Score=318.48 Aligned_cols=258 Identities=22% Similarity=0.288 Sum_probs=197.8
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccC------
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------ 869 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 869 (1082)
..++|++.+.||+|+||.||+|.. ..++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 456899999999999999999964 458899999986532 23456678999999999999999999987543
Q ss_pred CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
...|+||||++ +++.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 35799999995 578777753 478899999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH-----
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL----- 1024 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----- 1024 (1082)
+..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ...+.....
T Consensus 174 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-------~~~~~~~~~~~~~~ 244 (364)
T cd07875 174 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-------IDQWNKVIEQLGTP 244 (364)
T ss_pred cccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHHhcCCC
Confidence 865432 222345789999999999999999999999999999999999999964311 111111100
Q ss_pred ----------------hcCC-Cccc----cccccC----CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1025 ----------------LQGR-PCEF----FTAGLW----DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1025 ----------------~~~~-~~~~----~d~~l~----~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.... .... +.+... ..........+.+++.+|++.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 245 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred CHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 0000 000000 00011224578899999999999999999999875
No 256
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.1e-32 Score=301.36 Aligned_cols=251 Identities=21% Similarity=0.322 Sum_probs=191.4
Q ss_pred eecccCceEEEEEEEcC---CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCC
Q 045553 808 CIGSGGFGATYKAEIIP---GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGN 883 (1082)
Q Consensus 808 ~lg~G~~g~Vy~a~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gs 883 (1082)
.||+|+||.||+|+..+ ...+|+|.+.... ......+.+|++.++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999996543 3578888875443 2334578899999999999999999999999999999999999999
Q ss_pred HHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc-c
Q 045553 884 LEKFIQDRPR---RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH-A 959 (1082)
Q Consensus 884 L~~~l~~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~-~ 959 (1082)
|.+++..... ...++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999987532 3356788899999999999999999 9999999999999999999999999998754322211 1
Q ss_pred ccCcccCCCcccchhccc-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 960 TTDVAGTFGYVAPEYAMT-------CRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
.....++..|+|||+... ..++.++|||||||++|||++ |..||.... ..+......... ..+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--------~~~~~~~~~~~~-~~~ 229 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS--------DEQVLKQVVREQ-DIK 229 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC--------HHHHHHHHhhcc-Ccc
Confidence 223346778999998743 456789999999999999999 677775321 112222222222 112
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
..++.+ +......+.+++..|+ .||++||+++||++.|.
T Consensus 230 ~~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 230 LPKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 222221 2234467788899998 59999999999999874
No 257
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.8e-32 Score=301.45 Aligned_cols=249 Identities=25% Similarity=0.357 Sum_probs=196.8
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc-----cccHHHHHHHHHHHhccCCCceeeEeeeecc--CCeE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR-----FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS--EAEM 872 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 872 (1082)
.+|++.+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+.++++++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688999999999999999965 468999999886432 1234568889999999999999999998765 3578
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
+++|||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 9999999999999999864 3588999999999999999999998 9999999999999999999999999999765
Q ss_pred CCCCC--ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 953 GTSET--HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 953 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
..... .......++..|+|||++.+..++.++||||+||++|||++|+.||.... . ...+........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~-------~-~~~~~~~~~~~~-- 226 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE-------A-MAAIFKIATQPT-- 226 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc-------h-HHHHHHHhcCCC--
Confidence 32211 11223458889999999999889999999999999999999999986321 1 111111111111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.+ ..+......+..++ +|+..+|++||+|+||++
T Consensus 227 ---~~----~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 ---NP----QLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ---CC----CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 01 12233345566676 788899999999999975
No 258
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.1e-33 Score=305.89 Aligned_cols=240 Identities=23% Similarity=0.307 Sum_probs=191.4
Q ss_pred ceecccCceEEEEEEEcC--------CeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 807 NCIGSGGFGATYKAEIIP--------GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++|||++++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999996532 234888888655555567789999999999999999999999998999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc--------EEEeecccce
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN--------AYLSDFGLAR 950 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--------~kl~DfGla~ 950 (1082)
+++|+|.++++.. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++. ++++|||.+.
T Consensus 81 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 9999999999875 33689999999999999999999999 9999999999999987765 6999999987
Q ss_pred ecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCC-CCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDK-KALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
..... ....++..|+|||++.+ ..++.++||||||+++|||++|. .|+.... ....... ....
T Consensus 157 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~--------~~~~~~~-~~~~- 221 (258)
T cd05078 157 TVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALD--------SQKKLQF-YEDR- 221 (258)
T ss_pred ccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhcc--------HHHHHHH-HHcc-
Confidence 54322 22457889999999986 45789999999999999999995 4443211 1111111 1110
Q ss_pred CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1029 PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
. ..+.....++.+++.+|++.+|++||+++++++.|+
T Consensus 222 -~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 -H---------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -c---------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 122233457899999999999999999999999874
No 259
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.4e-32 Score=300.89 Aligned_cols=238 Identities=26% Similarity=0.357 Sum_probs=190.6
Q ss_pred ceecccCceEEEEEEEcCC-----------eEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 807 NCIGSGGFGATYKAEIIPG-----------VVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~~-----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
+.||+|+||.||+|...+. ..|++|.+...... ...+.+|+.++++++|||++++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 4689999999999976543 25788877654433 6788999999999999999999999888 788999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-------cEEEeeccc
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL-------NAYLSDFGL 948 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-------~~kl~DfGl 948 (1082)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 99999999999998753 3689999999999999999999999 999999999999999888 799999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhcccC--CCCchhhHHHHHHHHHHHHhC-CCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMTC--RVSDKADVYSFGVVLLELISD-KKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slGvll~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
+..... .....++..|+|||++.+. .++.++||||||+++|||++| ..||..... ..+......
T Consensus 155 a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--------~~~~~~~~~ 221 (259)
T cd05037 155 PITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS--------SEKERFYQD 221 (259)
T ss_pred cccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--------hhHHHHHhc
Confidence 986543 1223567789999999876 789999999999999999994 666653211 111111111
Q ss_pred cCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1026 QGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1026 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
.. . .+......+.+++.+|++.+|++||++.||++.|+
T Consensus 222 ~~-~-----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 222 QH-R-----------LPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CC-C-----------CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11 0 01111268899999999999999999999998874
No 260
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=6.6e-33 Score=307.66 Aligned_cols=260 Identities=22% Similarity=0.391 Sum_probs=205.8
Q ss_pred ccHHHHHHHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeecc
Q 045553 791 LTYENVVRATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVS 868 (1082)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 868 (1082)
.++.++..+.+.|++.+.||+|+||.||+|.. .+++.||+|++.... ....++..|+.+++++ +|+|++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 34555556778899999999999999999965 458899999986543 2345688899999998 69999999998853
Q ss_pred ------CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEE
Q 045553 869 ------EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAY 942 (1082)
Q Consensus 869 ------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 942 (1082)
....++||||+++|+|.+++.......+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 45789999999999999999876666788999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCccccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHH
Q 045553 943 LSDFGLARLLGTSETHATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIV 1017 (1082)
Q Consensus 943 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~ 1017 (1082)
|+|||++........ ......|+..|+|||.+. +..++.++|||||||++|||++|+.||...... .
T Consensus 162 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~-------~ 233 (282)
T cd06636 162 LVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM-------R 233 (282)
T ss_pred EeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH-------h
Confidence 999999876532221 223356899999999875 356788999999999999999999999643211 0
Q ss_pred HHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1018 AWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1018 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
. ... ........ ......+..+.+++.+||+.+|++||++.|+++
T Consensus 234 ~-~~~-~~~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 234 A-LFL-IPRNPPPK--------LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred h-hhh-HhhCCCCC--------CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 000 11110000 011234568999999999999999999999975
No 261
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.1e-33 Score=316.87 Aligned_cols=193 Identities=26% Similarity=0.377 Sum_probs=166.6
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
...+|++.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++......++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3457999999999999999999765 4688999975432 23568999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+ .++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 138 ~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 138 HY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred cc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 99 56899988764 45789999999999999999999999 9999999999999999999999999999753222
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALD 1004 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~ 1004 (1082)
.......||..|+|||++.+..++.++|||||||++|||+++..|+.
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 12234568999999999999999999999999999999998766653
No 262
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=9.9e-33 Score=327.68 Aligned_cols=264 Identities=21% Similarity=0.239 Sum_probs=193.3
Q ss_pred HHHHHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCC------CceeeEeeeec
Q 045553 795 NVVRATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQH------PNLVTLIGYHV 867 (1082)
Q Consensus 795 ~~~~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~~~~ 867 (1082)
++....++|++.++||+|+||+||+|.. .+++.||||+++... .....+..|+++++.++| .+++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3344568899999999999999999964 458899999986432 223445667777776654 45888988887
Q ss_pred cC-CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-------
Q 045553 868 SE-AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL------- 939 (1082)
Q Consensus 868 ~~-~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~------- 939 (1082)
.. ..+++|||++ +++|.+++... ..+++..+..|+.||+.||+|||+.+ +|+||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~~~~~~ 276 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVVDPVT 276 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCccccccc
Confidence 54 5789999988 78999988764 46899999999999999999999732 999999999999998765
Q ss_pred ---------cEEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCC
Q 045553 940 ---------NAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSF 1010 (1082)
Q Consensus 940 ---------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~ 1010 (1082)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+....
T Consensus 277 ~~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~-- 350 (467)
T PTZ00284 277 NRALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN-- 350 (467)
T ss_pred ccccCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--
Confidence 49999999876432 223446799999999999999999999999999999999999999974321
Q ss_pred CCCccHHHHHHHHHh---------------------cCCCccccccc----c-CCCC--ChHHHHHHHHHHHHcccCCCC
Q 045553 1011 GNGFNIVAWASMLLL---------------------QGRPCEFFTAG----L-WDCG--PHDDLIEMLNLAIMCTGESLS 1062 (1082)
Q Consensus 1011 ~~~~~~~~~~~~~~~---------------------~~~~~~~~d~~----l-~~~~--~~~~~~~l~~li~~cl~~~p~ 1062 (1082)
......+..... .+......++. + .... .......+.+|+.+|++.||+
T Consensus 351 ---~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~ 427 (467)
T PTZ00284 351 ---LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQ 427 (467)
T ss_pred ---HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChh
Confidence 111111111000 00000000000 0 0000 001134578999999999999
Q ss_pred CCCCHHHHHHH
Q 045553 1063 SRPSMRQVAQQ 1073 (1082)
Q Consensus 1063 ~RPt~~ev~~~ 1073 (1082)
+|||+.|++++
T Consensus 428 ~R~ta~e~L~H 438 (467)
T PTZ00284 428 KRLNARQMTTH 438 (467)
T ss_pred hCCCHHHHhcC
Confidence 99999999873
No 263
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1e-32 Score=303.09 Aligned_cols=253 Identities=25% Similarity=0.413 Sum_probs=207.1
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++......++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5788899999999999999765 58999999987653 244567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHD-ECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
++++|.+++.... ..+++..+..++.|++.|++|||+ . +++||||||+||+++.++.++|+|||.+.........
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 157 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK 157 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence 9999999998753 578999999999999999999999 7 9999999999999999999999999998765322211
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
...++..|+|||+..+..++.++||||+|+++|+|++|+.||...... .....+.+....... ....
T Consensus 158 ---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~-~~~~------ 224 (265)
T cd06605 158 ---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP---PDGIFELLQYIVNEP-PPRL------ 224 (265)
T ss_pred ---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc---cccHHHHHHHHhcCC-CCCC------
Confidence 156888999999999999999999999999999999999999754221 122333333332221 1111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......++.+++.+|+..+|++||++.|++.+
T Consensus 225 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 225 --PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred --ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 011145679999999999999999999999763
No 264
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.9e-32 Score=300.02 Aligned_cols=251 Identities=21% Similarity=0.353 Sum_probs=191.4
Q ss_pred eecccCceEEEEEEEcCC---eEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCC
Q 045553 808 CIGSGGFGATYKAEIIPG---VVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGN 883 (1082)
Q Consensus 808 ~lg~G~~g~Vy~a~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gs 883 (1082)
.||+|+||.||+|+..++ ..+++|.+.... ....+.+.+|+..++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999965443 345667665433 2345688999999999999999999999999999999999999999
Q ss_pred HHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC-Cccc
Q 045553 884 LEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE-THAT 960 (1082)
Q Consensus 884 L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~-~~~~ 960 (1082)
|.++++... ....++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++....... ....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999998642 23467778889999999999999999 99999999999999999999999999986432211 1122
Q ss_pred cCcccCCCcccchhccc-------CCCCchhhHHHHHHHHHHHHhC-CCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 961 TDVAGTFGYVAPEYAMT-------CRVSDKADVYSFGVVLLELISD-KKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slGvll~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
....++..|+|||+... ..++.++||||||+++|||+++ ..||... ...........++ ....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~--------~~~~~~~~~~~~~-~~~~ 229 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL--------SDREVLNHVIKDQ-QVKL 229 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHHhhc-cccc
Confidence 34567889999998753 3457899999999999999975 5566421 1223333333222 2233
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
.++.+.. .....+.+++..|| .+|++||++.||++.|.
T Consensus 230 ~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLEL----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccCC----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3333322 23457888999999 67999999999998874
No 265
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.5e-33 Score=307.10 Aligned_cols=260 Identities=23% Similarity=0.352 Sum_probs=201.2
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
++|++.++||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++..+...++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36888999999999999999765 589999998864322 234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|++++++..+.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99999998877653 3589999999999999999999999 99999999999999999999999999998764433
Q ss_pred ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc-----
Q 045553 958 HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE----- 1031 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 1031 (1082)
.......++..|+|||+..+ ..++.++||||||+++|||++|+.||.... ....+.......+...+
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDS-------DIDQLYHIIKCLGNLIPRHQEI 227 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCc-------hHHHHHHHHHHhCCCchhhHHH
Confidence 22334568899999999875 457889999999999999999998886321 11111111110000000
Q ss_pred ---------ccccccCC-----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 ---------FFTAGLWD-----CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 ---------~~d~~l~~-----~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+..+.... ......+..+.+++.+|++.+|++||++.+++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 228 FQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000000 0012345679999999999999999999999863
No 266
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-33 Score=298.82 Aligned_cols=248 Identities=23% Similarity=0.386 Sum_probs=211.2
Q ss_pred hcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCccc--cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQ--GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.+-|+..+.||+|.|+.|-+|+ .-+|..||||++...... ....+..|++.|+-++|||||+++++...+...|+|+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 3458889999999999999994 457999999999776443 3457889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE-cCCCcEEEeecccceecCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL-DNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill-~~~~~~kl~DfGla~~~~~~ 955 (1082)
|.=.+|+|++|+.++ ...+.+....+++.||+.|+.|.|+. .+||||+||+||.+ .+-|-+|++|||++-.+.+.
T Consensus 97 ELGD~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred EecCCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 999999999999887 56799999999999999999999999 99999999999866 56789999999999877554
Q ss_pred CCccccCcccCCCcccchhcccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVS-DKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
. ...+.+|+..|.|||++.+..|+ ++.||||+||++|-+++|+.||.+.... + .+..++|
T Consensus 173 ~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS--------E---------TLTmImD 233 (864)
T KOG4717|consen 173 K--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS--------E---------TLTMIMD 233 (864)
T ss_pred c--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch--------h---------hhhhhhc
Confidence 3 34567899999999999998887 4789999999999999999999753222 1 1122333
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
... ..|.....+..++|..|+..||.+|.+..||+.
T Consensus 234 CKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 234 CKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 332 246677889999999999999999999999975
No 267
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.9e-32 Score=301.00 Aligned_cols=255 Identities=24% Similarity=0.394 Sum_probs=200.2
Q ss_pred ccccceecccCceEEEEEEEc----CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCC------
Q 045553 803 FNVQNCIGSGGFGATYKAEII----PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA------ 870 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 870 (1082)
|.+.+.||+|+||.||+|.+. ++..||||++.... ....+++.+|++++++++|||++++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567889999999999999653 36889999986542 234567889999999999999999999876532
Q ss_pred eEEEEEeecCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeec
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRP----RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDF 946 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 946 (1082)
..++++||+++|+|.+++.... ...+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2478999999999998875421 23578999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 947 GLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 947 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
|.++........ ......++..|++||...+..++.++||||||+++|||++ |+.||.... .........
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~ 229 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE--------NSEIYNYLI 229 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC--------HHHHHHHHH
Confidence 999866433221 1222345678999999998889999999999999999999 788875321 112222221
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...... .+......+.+++.+|++.+|++||++.|+++.|+++.
T Consensus 230 ~~~~~~----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~ 273 (273)
T cd05074 230 KGNRLK----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW 273 (273)
T ss_pred cCCcCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 111110 11234568999999999999999999999999999863
No 268
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.1e-32 Score=314.97 Aligned_cols=256 Identities=23% Similarity=0.337 Sum_probs=196.9
Q ss_pred HHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccC-----
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE----- 869 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 869 (1082)
+..++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 4567899999999999999999964 5688999999865322 2345677899999999999999999887543
Q ss_pred -CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 870 -AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 870 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
...++++|++ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCcc
Confidence 4579999998 8899988864 3689999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-c
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL-Q 1026 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 1026 (1082)
++..... .....|+..|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+.+..... .
T Consensus 165 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~~~~~~ 232 (343)
T cd07878 165 ARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGND--------YIDQLKRIMEVV 232 (343)
T ss_pred ceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHHHh
Confidence 9865432 234568999999999877 568899999999999999999999986321 1111111100 0
Q ss_pred CCC-ccccc-----------cccCCCCC--------hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1027 GRP-CEFFT-----------AGLWDCGP--------HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1027 ~~~-~~~~d-----------~~l~~~~~--------~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+.. .+... ..+. ..+ ......+.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 233 GTPSPEVLKKISSEHARKYIQSLP-HMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CCCCHHHHHhcchhhHHHHhhccc-cccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00000 0000 000 0122357899999999999999999999865
No 269
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.9e-32 Score=307.01 Aligned_cols=261 Identities=20% Similarity=0.285 Sum_probs=199.7
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++|.+.+.||+|+||.||+|... ++..||+|.+.... ......+.+|++++++++||||+++++++......++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46889999999999999999654 58899999986543 23345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~- 159 (301)
T cd07873 86 LD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK- 159 (301)
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-
Confidence 96 6999998765 34688999999999999999999999 999999999999999999999999999976533222
Q ss_pred cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC---CCccccc
Q 045553 959 ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG---RPCEFFT 1034 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d 1034 (1082)
......++..|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+....... .....++
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV-----EEQLHFIFRILGTPTEETWPGILS 234 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHcCCCChhhchhhhc
Confidence 2223457889999999865 4578899999999999999999999964321 11111111110000 0000000
Q ss_pred ---------cccCCC----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1035 ---------AGLWDC----GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1035 ---------~~l~~~----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
+..... ........+.+++.+|++.||.+|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000 01123457889999999999999999999987
No 270
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=318.72 Aligned_cols=252 Identities=25% Similarity=0.433 Sum_probs=210.1
Q ss_pred cccceecccCceEEEEEEEc-CC----eEEEEEEeecC-ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 804 NVQNCIGSGGFGATYKAEII-PG----VVVAVKRLSVG-RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 804 ~~~~~lg~G~~g~Vy~a~~~-~~----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
+-.++||+|+||+||+|.|- +| -+||+|++... ..+...++.+|+-.|.+++|||+++++|+|.... ..||.+
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 44578999999999999653 33 56899988644 3456788999999999999999999999998766 889999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
||+.|+|.+|++.+ +..+.....+.|..|||+||.|||.+ +++||||..+|||+.+-..+||.|||+++....++.
T Consensus 778 ~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred hcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 99999999999987 56788899999999999999999999 999999999999999999999999999998865544
Q ss_pred c-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 958 H-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 958 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
. ......-.+.|||-|.+....++.++|||||||.+||++| |..|++... ..+ +.+.+..
T Consensus 854 ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~--------~~e----------I~dlle~ 915 (1177)
T KOG1025|consen 854 EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP--------AEE----------IPDLLEK 915 (1177)
T ss_pred cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC--------HHH----------hhHHHhc
Confidence 3 2333345678999999999999999999999999999987 888876432 111 1222223
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+-..|+.+..++..++.+||..|++.||+++++...+.+..
T Consensus 916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 3333567788899999999999999999999999999887653
No 271
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3e-32 Score=307.73 Aligned_cols=252 Identities=25% Similarity=0.337 Sum_probs=203.9
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccc---cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQ---GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|++.++.++|+||+++++++......++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999655 4899999999765332 4567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+.+++|.+++.......+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999999876567799999999999999999999999 99999999999999999999999999987553221
Q ss_pred Cc----------------------------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCcc
Q 045553 957 TH----------------------------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFC 1008 (1082)
Q Consensus 957 ~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~ 1008 (1082)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10 11134688899999999998999999999999999999999999863211
Q ss_pred CCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCC----HHHHHH
Q 045553 1009 SFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS----MRQVAQ 1072 (1082)
Q Consensus 1009 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt----~~ev~~ 1072 (1082)
...+ ....... . .-......+..+.+++.+|++.+|++||+ +.|+++
T Consensus 238 -------~~~~-~~~~~~~-~--------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 -------DETF-SNILKKE-V--------TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred -------HHHH-HHHhcCC-c--------cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 1111 1111111 0 00011124678999999999999999999 666655
No 272
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.5e-32 Score=301.68 Aligned_cols=262 Identities=24% Similarity=0.331 Sum_probs=201.1
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++|||++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888999999999999999765 58999999986442 2234567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|++++++..+... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 9999888887764 34689999999999999999999999 999999999999999999999999999987654332
Q ss_pred ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-----------
Q 045553 958 HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL----------- 1025 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 1025 (1082)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||...... ..... ......
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV----DQLYL-IRKTLGDLIPRHQQIFS 229 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH----HHHHH-HHHHhCCCChHHhhhcc
Confidence 2223457889999999876 55789999999999999999999999643211 01111 111000
Q ss_pred cCCC-ccccccccCCCCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1026 QGRP-CEFFTAGLWDCGP-----HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 ~~~~-~~~~d~~l~~~~~-----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.... .....+......+ ...+..+.+++.+|++.+|++||++.|++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000 0000000000001 1234678999999999999999999999763
No 273
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-36 Score=342.75 Aligned_cols=449 Identities=26% Similarity=0.307 Sum_probs=307.4
Q ss_pred cccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCC
Q 045553 105 AIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGF 184 (1082)
Q Consensus 105 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 184 (1082)
.+..--+|+.|+|++|++. ..|..+..+.+|+.|.++.|.|. .+|.+..++.+|++|+|.+|++. ..|..+..+.+|
T Consensus 40 ~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl 116 (1081)
T KOG0618|consen 40 FVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNL 116 (1081)
T ss_pred HhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcc
Confidence 3444555999999999998 89999999999999999999999 88999999999999999999998 899999999999
Q ss_pred cEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCC
Q 045553 185 QVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSR 264 (1082)
Q Consensus 185 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 264 (1082)
+.|++++|++. .+|..+. .+..++.+..++|..... ++... ++.+++..|.+.+.++..+..++. .|+|.+
T Consensus 117 ~~LdlS~N~f~-~~Pl~i~-~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~ 187 (1081)
T KOG0618|consen 117 QYLDLSFNHFG-PIPLVIE-VLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRY 187 (1081)
T ss_pred cccccchhccC-CCchhHH-hhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccchhcchhhhhe--eeeccc
Confidence 99999999998 8888876 478888889999832222 33322 788899999998888888887777 799999
Q ss_pred CcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCC
Q 045553 265 NFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIF 344 (1082)
Q Consensus 265 N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~ 344 (1082)
|.+. -..+..+.+|+.|....|.+..+......+. ....++|.+....+. ..-.+|++++++.|+++...
T Consensus 188 N~~~---~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~-----~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~lp 257 (1081)
T KOG0618|consen 188 NEME---VLDLSNLANLEVLHCERNQLSELEISGPSLT-----ALYADHNPLTTLDVH--PVPLNLQYLDISHNNLSNLP 257 (1081)
T ss_pred chhh---hhhhhhccchhhhhhhhcccceEEecCcchh-----eeeeccCcceeeccc--cccccceeeecchhhhhcch
Confidence 9986 3456777888888887776544332111110 011112222211110 11124445555555554433
Q ss_pred CcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcceecCCCCCCcccc
Q 045553 345 PQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLSGEIPRISHSECS 424 (1082)
Q Consensus 345 ~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 424 (1082)
+++..+.+|+.|+..+|+++ .+|..+..+++|+.|++.+|.+...+|...++..|+.|+|..|+|.
T Consensus 258 -~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~------------ 323 (1081)
T KOG0618|consen 258 -EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLP------------ 323 (1081)
T ss_pred -HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhcccc------------
Confidence 44555555555555555553 4444444455555555555555444444444455555555555443
Q ss_pred cccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCc
Q 045553 425 KMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLK 504 (1082)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~ 504 (1082)
.+|+.+.....
T Consensus 324 ----------------------------------------------------~lp~~~l~v~~----------------- 334 (1081)
T KOG0618|consen 324 ----------------------------------------------------SLPDNFLAVLN----------------- 334 (1081)
T ss_pred ----------------------------------------------------ccchHHHhhhh-----------------
Confidence 11211000000
Q ss_pred cccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCc
Q 045553 505 GNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLP 584 (1082)
Q Consensus 505 ~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 584 (1082)
..+..|..+-|++. ..|..-...+..|+.|++.+|.++...-..+.++.+|++|+|++|+|.....
T Consensus 335 -------------~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpa 400 (1081)
T KOG0618|consen 335 -------------ASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPA 400 (1081)
T ss_pred -------------HHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCH
Confidence 00112333333333 3333333344558889999999987777778889999999999999985555
Q ss_pred ccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCc
Q 045553 585 SYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSS 664 (1082)
Q Consensus 585 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 664 (1082)
..+.++..|++|+||+|+++ .+|..+..++.|++|...+|+|. ..| .+..+++|+.+|||.|+|+...-.....-++
T Consensus 401 s~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~ 477 (1081)
T KOG0618|consen 401 SKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPN 477 (1081)
T ss_pred HHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcc
Confidence 67788999999999999999 78899999999999999999998 677 7888999999999999998443333333388
Q ss_pred ccEEeccCCcc
Q 045553 665 LSIFDVSFNNL 675 (1082)
Q Consensus 665 L~~l~ls~N~l 675 (1082)
|++||+++|..
T Consensus 478 LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 478 LKYLDLSGNTR 488 (1081)
T ss_pred cceeeccCCcc
Confidence 99999999974
No 274
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.5e-32 Score=303.72 Aligned_cols=262 Identities=23% Similarity=0.316 Sum_probs=203.3
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++|||++++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788999999999999999754 68999999997654 23356789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+ +++|.+++.... ..+++.+++.++.|+++||+|||+. +++|+||||+||+++.++.++|+|||.+.........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 9 999999987653 5689999999999999999999999 9999999999999999999999999999877544332
Q ss_pred cccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC------cc
Q 045553 959 ATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP------CE 1031 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 1031 (1082)
......|+..|+|||++.+. .++.++||||+|+++|||++|..||.... ......++......... .+
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN-----DIEQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC-----HHHHHHHHHHHcCCCChHHHhhccC
Confidence 33345689999999998754 46889999999999999999977775321 11111111111100000 00
Q ss_pred cc--ccc-cC-------CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 FF--TAG-LW-------DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~--d~~-l~-------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. +.. .. .....+....+.+++.+|++.+|++||++.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000 00 00011334789999999999999999999999864
No 275
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=9.7e-33 Score=306.69 Aligned_cols=262 Identities=23% Similarity=0.276 Sum_probs=198.3
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++|||++++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999654 689999999865422 2235677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
++ ++|.+++... ...+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~- 154 (284)
T cd07839 81 CD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR- 154 (284)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-
Confidence 96 6888888754 34689999999999999999999999 999999999999999999999999999986543322
Q ss_pred cccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC------Ccc
Q 045553 959 ATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR------PCE 1031 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 1031 (1082)
......++..|+|||++.+. .++.++|||||||++|||++|+.|+...... ............... ...
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV----DDQLKRIFRLLGTPTEESWPGVSK 230 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH----HHHHHHHHHHhCCCChHHhHHhhh
Confidence 22334578899999998764 4689999999999999999999997532211 000111100000000 000
Q ss_pred ccccc----cC-----CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 FFTAG----LW-----DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~d~~----l~-----~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+.. .. .........++.+++.+|++.||++|||+.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 00000 00 01112235678899999999999999999999763
No 276
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.8e-32 Score=300.01 Aligned_cols=256 Identities=24% Similarity=0.406 Sum_probs=206.3
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++|++.+.||.|+||+||+|... ++..+|+|++.... ....+.+.+|++.++.++|+|++++++.+......++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 36889999999999999999754 57899999986543 23567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 879 LPGGNLEKFIQDRPR-RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
+++++|.++++.... ..+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999986432 5689999999999999999999999 999999999999999999999999999976654332
Q ss_pred c---cccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 958 H---ATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 958 ~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
. ......|+..|+|||++... .++.++|||||||++|||++|+.||..... ........... ..
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--------~~~~~~~~~~~-~~--- 225 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP--------MKVLMLTLQND-PP--- 225 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh--------hhhHHHHhcCC-CC---
Confidence 2 22334688999999998876 788999999999999999999999964321 11111111111 11
Q ss_pred ccccCCC-CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1034 TAGLWDC-GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1034 d~~l~~~-~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..... .....+..+.+++.+|++.+|++||++.|++++
T Consensus 226 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 226 --SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred --CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11100 012345678999999999999999999999863
No 277
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-32 Score=304.55 Aligned_cols=252 Identities=25% Similarity=0.438 Sum_probs=201.8
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecC-ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG-RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
+|++.+.||+|+||.||+|... ++..||+|.+... .......+.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5888999999999999999765 6899999988754 2233567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 880 PGGNLEKFIQDRP-RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 880 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
++++|.++++... ...+++..+..++.|++.|+.|||+.+ +|+||||||+||+++.++.+||+|||.+..+....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 157 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL-- 157 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc--
Confidence 9999999987632 236899999999999999999999632 89999999999999999999999999997653222
Q ss_pred cccCcccCCCcccchhcccCC------CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 959 ATTDVAGTFGYVAPEYAMTCR------VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.....++..|+|||.+.+.. ++.++||||+||++|||++|+.||.... .......... ...+...
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~-~~~~~~~-- 228 (286)
T cd06622 158 -AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET-----YANIFAQLSA-IVDGDPP-- 228 (286)
T ss_pred -cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc-----hhhHHHHHHH-HhhcCCC--
Confidence 22345788999999986543 4789999999999999999999996321 1111111111 1111111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+.....++..++.+|++.+|++||++.+++++
T Consensus 229 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 229 -------TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -------CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1223456788999999999999999999999874
No 278
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2e-32 Score=305.24 Aligned_cols=262 Identities=24% Similarity=0.378 Sum_probs=206.1
Q ss_pred ccHHHHHHHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeecc
Q 045553 791 LTYENVVRATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVS 868 (1082)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 868 (1082)
++++++..++++|++.+.||+|+||.||+|.. .+++.+|+|++.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 45566677889999999999999999999965 468899999986432 2345678899999998 89999999998864
Q ss_pred C-----CeEEEEEeecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcE
Q 045553 869 E-----AEMFLIYNYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNA 941 (1082)
Q Consensus 869 ~-----~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 941 (1082)
. ...++||||+++++|.++++.. ....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCE
Confidence 3 3689999999999999988642 245689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccCcccCCCcccchhcccC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccH
Q 045553 942 YLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTC-----RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNI 1016 (1082)
Q Consensus 942 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~ 1016 (1082)
||+|||.+......... .....|+..|+|||++... .++.++|||||||++|||++|+.||..... .
T Consensus 168 kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~-------~ 239 (291)
T cd06639 168 KLVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP-------V 239 (291)
T ss_pred EEeecccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH-------H
Confidence 99999998865432221 2234688999999997543 367899999999999999999999864311 1
Q ss_pred HHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1017 VAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. +.. ...+...... .+......+.+++.+|++.+|++||++.|++++
T Consensus 240 ~~-~~~-~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 240 KT-LFK-IPRNPPPTLL-------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HH-HHH-HhcCCCCCCC-------cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11 111 1111111111 122344579999999999999999999999864
No 279
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.7e-32 Score=308.25 Aligned_cols=194 Identities=26% Similarity=0.442 Sum_probs=160.9
Q ss_pred ceecccCceEEEEEEEc---CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeec--cCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII---PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHV--SEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~lV~E~~~~ 881 (1082)
.+||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++. .+...++||||++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 57999999999999764 35789999886543 2346788999999999999999999885 3567899999995
Q ss_pred CCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE----cCCCcEEEeecccce
Q 045553 882 GNLEKFIQDR-------PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL----DNNLNAYLSDFGLAR 950 (1082)
Q Consensus 882 gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~DfGla~ 950 (1082)
++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 5888877532 123588999999999999999999999 99999999999999 566799999999998
Q ss_pred ecCCCCC--ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 045553 951 LLGTSET--HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPS 1006 (1082)
Q Consensus 951 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~ 1006 (1082)
....... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 7654322 12334578999999999876 45789999999999999999999999643
No 280
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.5e-32 Score=302.57 Aligned_cols=260 Identities=25% Similarity=0.335 Sum_probs=204.0
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 876 (1082)
++|.+.+.||.|++|.||+|.. .+++.+|+|.+..... ....++.+|++++++++||||+++++++.+. ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 3688889999999999999976 4589999999875432 3456789999999999999999999988653 4689999
Q ss_pred eecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 877 NYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||+++++|.+++... ....+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999987642 245688999999999999999999999 999999999999999999999999999876533
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
... ....++..|+|||.+.+..++.++||||+|+++|+|++|+.||+..... .....+........ ..... .
T Consensus 158 ~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~-~~~~~-~ 229 (287)
T cd06621 158 SLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP---PLGPIELLSYIVNM-PNPEL-K 229 (287)
T ss_pred ccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC---CCChHHHHHHHhcC-Cchhh-c
Confidence 221 2345788999999999999999999999999999999999999754321 11222222222211 11111 1
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.... .....+..+.+++.+|++.+|++|||+.||+++
T Consensus 230 ~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 230 DEPG--NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred cCCC--CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 1100 012345678999999999999999999999873
No 281
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-33 Score=304.91 Aligned_cols=251 Identities=22% Similarity=0.368 Sum_probs=203.2
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecC--ccccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E 877 (1082)
..|++.++||+||.+.||++...+.+.+|+|++... +.+....|..|+..|.+++ |.+||++++|-..++..|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 458899999999999999999888899999987543 4455678999999999995 8999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|= ..+|..+|+........| .++.+..||+.|+.+.|++ ||||.||||.|+++-. |.+||+|||.|..+..+.+
T Consensus 441 ~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 441 CG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred cc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCcccc
Confidence 86 679999999875555555 7888999999999999999 9999999999999854 6899999999998876655
Q ss_pred c-cccCcccCCCcccchhcccC-----------CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 958 H-ATTDVAGTFGYVAPEYAMTC-----------RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 958 ~-~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
. .....+||+.||+||.+... +++.++||||+||++|+|+.|+.||.. ..-.|.+..
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~---------~~n~~aKl~-- 583 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ---------IINQIAKLH-- 583 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH---------HHHHHHHHH--
Confidence 4 34456899999999998532 256799999999999999999999962 111333332
Q ss_pred cCCCccccccccCCCCChHH-HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1026 QGRPCEFFTAGLWDCGPHDD-LIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 ~~~~~~~~d~~l~~~~~~~~-~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+.|+....++|.-. ..++.++|+.|++.||++||+..|++++
T Consensus 584 -----aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 584 -----AITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred -----hhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 233333322333211 2239999999999999999999999874
No 282
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.8e-32 Score=298.39 Aligned_cols=251 Identities=29% Similarity=0.462 Sum_probs=203.7
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCccc--cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQ--GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|++.+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5888999999999999999654 6899999998766443 567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.++++.. ..+++..+..++.|++.|++|||+. +|+||||+|+||++++++.+||+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999999864 3578999999999999999999999 9999999999999999999999999999876543332
Q ss_pred cc---cCcccCCCcccchhcccCC---CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 959 AT---TDVAGTFGYVAPEYAMTCR---VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 959 ~~---~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.. ....++..|+|||++.+.. ++.++||||||+++||+++|+.||.... .-........ .+.....
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~-------~~~~~~~~~~-~~~~~~~ 227 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD-------NEFQIMFHVG-AGHKPPI 227 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc-------chHHHHHHHh-cCCCCCC
Confidence 21 2356788999999998766 8899999999999999999999996421 1111111111 1111111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.........+.+++.+|++.+|++||++.|++.
T Consensus 228 -------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 -------PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -------CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 001122567889999999999999999999875
No 283
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.3e-32 Score=305.27 Aligned_cols=248 Identities=22% Similarity=0.332 Sum_probs=201.2
Q ss_pred ccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 803 FNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
|+....||+|+||.||+|.. .+++.||+|++........+.+.+|+..++.++|||++++++++..++..++||||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 44455799999999999965 46899999998765555567788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++........ ...
T Consensus 103 ~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~ 175 (297)
T cd06659 103 GALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRK 175 (297)
T ss_pred CCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc-ccc
Confidence 999998764 3589999999999999999999999 999999999999999999999999999876543222 223
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|+..|+|||++.+..++.++|||||||++|||++|+.||.... ........ ........ ..
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--------~~~~~~~~-~~~~~~~~-------~~ 239 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS--------PVQAMKRL-RDSPPPKL-------KN 239 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHH-hccCCCCc-------cc
Confidence 3568999999999998899999999999999999999999986321 11111111 11111100 01
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......+.+++.+|++.+|++||++.|++++
T Consensus 240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 240 AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 12234578899999999999999999999884
No 284
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.7e-32 Score=300.01 Aligned_cols=254 Identities=25% Similarity=0.413 Sum_probs=200.5
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc----------ccHHHHHHHHHHHhccCCCceeeEeeeeccCC
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF----------QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 870 (1082)
+|.+.+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++|||++++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 477889999999999999954 4689999998864211 11346788999999999999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
..++||||+++++|.++++.. ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999999875 4689999999999999999999999 99999999999999999999999999997
Q ss_pred ecCCCCCc-cccCcccCCCcccchhcccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 951 LLGTSETH-ATTDVAGTFGYVAPEYAMTCR--VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 951 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
........ ......|+..|+|||++.... ++.++||||+|+++||+++|+.||... .....+. ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~-------~~~~~~~-~~~~~~ 228 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE-------EAIAAMF-KLGNKR 228 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc-------chHHHHH-Hhhccc
Confidence 65432211 223346889999999987654 789999999999999999999998532 1111111 111111
Q ss_pred CCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1028 RPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+.... ....+..+.+++.+|++.+|++||++.+|+++
T Consensus 229 -~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 229 -SAPPIPPDV----SMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred -cCCcCCccc----cccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 111111111 12345689999999999999999999999864
No 285
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.4e-32 Score=298.66 Aligned_cols=250 Identities=26% Similarity=0.384 Sum_probs=205.6
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|.+.+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|+++++.++|+|++++++++......++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4788899999999999999654 58899999986542 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-cEEEeecccceecCCCCC
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL-NAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~~~~ 957 (1082)
+++++|.+++.......+++..+..++.|++.|++|||+. +++|+||||+||++++++ .+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 9999999999876555789999999999999999999999 999999999999999885 569999999987643322
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
......|++.|+|||+..+..++.++||||||+++|||++|+.||... ...+++....... ...
T Consensus 158 -~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~-~~~------ 221 (257)
T cd08225 158 -LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN--------NLHQLVLKICQGY-FAP------ 221 (257)
T ss_pred -cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc--------cHHHHHHHHhccc-CCC------
Confidence 222345889999999998888999999999999999999999998632 2334444332221 111
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+......+.+++.+|++.+|++||++.||+++
T Consensus 222 ---~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 222 ---ISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ---CCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 112334579999999999999999999999864
No 286
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.9e-32 Score=299.04 Aligned_cols=252 Identities=23% Similarity=0.417 Sum_probs=203.3
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc------ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF------QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
+|+..+.||+|+||.||+|.. .++..||+|++..... ...+.+.+|++.+++++|+|++++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999964 5689999999865431 234678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-cEEEeecccceecC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL-NAYLSDFGLARLLG 953 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~ 953 (1082)
||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++ .+||+|||.+..+.
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 99999999999999764 4688999999999999999999999 999999999999998776 59999999998765
Q ss_pred CCCCc---cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 954 TSETH---ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 954 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
..... ......|+..|+|||++.+..++.++||||+|+++|+|++|+.||..... ...............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~-- 228 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH-----SNHLALIFKIASATT-- 228 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-----cchHHHHHHHhccCC--
Confidence 43211 12234688999999999888899999999999999999999999863211 111122211111111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
....+.....++.+++.+|++.+|++||++.|+++
T Consensus 229 -------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 229 -------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 11223345578999999999999999999999975
No 287
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=6e-32 Score=297.02 Aligned_cols=250 Identities=23% Similarity=0.320 Sum_probs=198.7
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc-----cccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR-----FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEM 872 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 872 (1082)
.+|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688999999999999999965 458999999886432 12345788899999999999999999988764 467
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++++|.+++... ..+++..+.+++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 8999999999999999764 3578889999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCC--ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 953 GTSET--HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 953 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||.... .... +........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-------~~~~-~~~~~~~~~-- 226 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE-------AMAA-IFKIATQPT-- 226 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc-------hHHH-HHHHhcCCC--
Confidence 32211 12233468899999999998889999999999999999999999986321 1111 111111110
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+......+..++.+|+. +|++||++.||+++
T Consensus 227 -------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 227 -------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred -------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 111234455678889999984 99999999999864
No 288
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.5e-32 Score=304.45 Aligned_cols=254 Identities=20% Similarity=0.294 Sum_probs=201.7
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999654 578999999875432 33457889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++......
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999999999764 4689999999999999999999999 99999999999999999999999999986421110
Q ss_pred C--------------ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH
Q 045553 957 T--------------HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM 1022 (1082)
Q Consensus 957 ~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1022 (1082)
. .......|+..|+|||.+.+..++.++||||||+++|||++|+.||... ...++...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~--------~~~~~~~~ 227 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD--------TPEELFGQ 227 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHH
Confidence 0 0112245788999999998888999999999999999999999998632 12233333
Q ss_pred HHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1023 LLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1023 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
...... . .+. .+...+..+.+++.+|++.+|++||++.++.+.|+
T Consensus 228 ~~~~~~-~---~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 228 VISDDI-E---WPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHhccc-C---CCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 222210 0 010 01123457899999999999999999766655554
No 289
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=6.6e-32 Score=296.48 Aligned_cols=252 Identities=25% Similarity=0.407 Sum_probs=209.6
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++|++.+.||+|++|.||+|... +++.||||++..... ...+.+.+|++.+++++|+|++++++++......++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999765 589999999876644 4467899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHD-ECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
+++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999999999864 568999999999999999999999 8 999999999999999999999999999987654332
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
. .....++..|+|||.+.+..++.++||||||+++|||++|+.||..... ....+.......... .
T Consensus 156 ~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~-~------- 221 (264)
T cd06623 156 Q-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-----PSFFELMQAICDGPP-P------- 221 (264)
T ss_pred c-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-----cCHHHHHHHHhcCCC-C-------
Confidence 2 1234678899999999999999999999999999999999999864321 122333333221111 1
Q ss_pred CCCCChH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1038 WDCGPHD-DLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1038 ~~~~~~~-~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+.. .+..+.+++.+|++.+|++||++.|++++
T Consensus 222 --~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 --SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11222 55789999999999999999999999874
No 290
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.7e-32 Score=304.24 Aligned_cols=250 Identities=23% Similarity=0.381 Sum_probs=205.2
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.++++++|||++++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5789999999999999999964 468899999987655555677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++........ .
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~ 171 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 171 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-c
Confidence 999999999753 578999999999999999999999 999999999999999999999999999876543322 2
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
.....|++.|+|||.+.+..++.++||||||+++|++++|+.||...... ..+......+. .. .
T Consensus 172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~--------~~~~~~~~~~~-~~-------~ 235 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--------RALYLIATNGT-PE-------L 235 (293)
T ss_pred cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh--------hheeehhcCCC-CC-------C
Confidence 23346888999999998888999999999999999999999999643211 00000101110 00 0
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+||+.+|++||++.+++.+
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122345678899999999999999999999876
No 291
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.8e-32 Score=305.35 Aligned_cols=248 Identities=23% Similarity=0.355 Sum_probs=201.0
Q ss_pred ccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 803 FNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
|.....||+|+||.||+|.. .++..||||++........+.+.+|+..++.++|+|++++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 44446799999999999965 46889999998766555667789999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
++|.+++.. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++........ ...
T Consensus 104 ~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~ 176 (292)
T cd06658 104 GALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KRK 176 (292)
T ss_pred CcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-cCc
Confidence 999998864 3588999999999999999999999 999999999999999999999999999876533222 223
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|+..|+|||+..+..++.++||||||+++|||++|+.||.... ..+.+... ... +...+..
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--------~~~~~~~~-~~~-----~~~~~~~-- 240 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP--------PLQAMRRI-RDN-----LPPRVKD-- 240 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHH-Hhc-----CCCcccc--
Confidence 3568899999999988889999999999999999999999986321 11111111 111 1111111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......+..++.+|+..+|.+|||+.|++++
T Consensus 241 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11234578899999999999999999999976
No 292
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.8e-32 Score=303.64 Aligned_cols=263 Identities=23% Similarity=0.318 Sum_probs=203.5
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36889999999999999999765 57899999986532 2335678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|++++.+..+... ...+++..+..++.|++.|++|||+. +++|||++|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9988777665544 34589999999999999999999999 999999999999999999999999999987755443
Q ss_pred ccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-----------
Q 045553 958 HATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL----------- 1025 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 1025 (1082)
.......++..|+|||++.+. .++.++||||||+++|+|++|+.||..... .+..........
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD-----IDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHhhhcc
Confidence 333445688999999999887 889999999999999999999999863211 110000000000
Q ss_pred -cCC-----Cccccccc-cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1026 -QGR-----PCEFFTAG-LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 -~~~-----~~~~~d~~-l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
... .....++. ....++...+.++.+++.+|++.+|++||++++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000 00000000 0001122336789999999999999999999999753
No 293
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.4e-32 Score=300.04 Aligned_cols=250 Identities=28% Similarity=0.455 Sum_probs=203.4
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeecc--CCeEEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS--EAEMFLIY 876 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lV~ 876 (1082)
+|++.+.||.|+||.||+|.. .++..||+|++.... ....+++..|++++++++|||++++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 478889999999999999954 468899999986543 2345678899999999999999999997754 45689999
Q ss_pred eecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHh-----hCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 877 NYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLH-----DECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
||+++++|.+++... ....+++..++.++.|++.|++||| +. +++||||+|+||+++.++.+||+|||.+
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999763 2457899999999999999999999 66 9999999999999999999999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
......... .....|+..|+|||++.+..++.++||||||+++|+|++|+.||.... ...+... ...+..
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~-~~~~~~ 227 (265)
T cd08217 158 KILGHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--------QLQLASK-IKEGKF 227 (265)
T ss_pred ccccCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--------HHHHHHH-HhcCCC
Confidence 876543321 233468999999999999889999999999999999999999987421 1222222 222211
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1030 CEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1030 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...+...+..+.+++.+|++.+|++||++.+|+++
T Consensus 228 ---------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 ---------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 11233456789999999999999999999999874
No 294
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=285.79 Aligned_cols=248 Identities=23% Similarity=0.312 Sum_probs=206.2
Q ss_pred hcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCccc---cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQ---GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.++||+|.||+|.+++ ..+++.+|+|+++....- +...-..|-++++..+||.+..+.-.|+..++.|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 4568999999999999999994 567999999999876443 334456788999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||..||.|.-++.. .+.+++...+.+..+|+.||.|||+. +||+||+|.+|.|+|+||++||+|||+++.- -.
T Consensus 247 MeyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~-I~ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEE-IK 320 (516)
T ss_pred EEEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhc-cc
Confidence 999999999888776 56799999999999999999999999 9999999999999999999999999999753 23
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
....+.+++||+.|+|||++....|..+.|.|.+|||+|||++|+.||..... ......+..++
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--------~kLFeLIl~ed-------- 384 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--------EKLFELILMED-------- 384 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch--------hHHHHHHHhhh--------
Confidence 34456779999999999999999999999999999999999999999974221 12222222211
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQ 1072 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~ 1072 (1082)
+ ..|.....+...++...+..||.+|- .++||.+
T Consensus 385 -~--kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 385 -L--KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred -c--cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 1 24555567888999999999999996 4555543
No 295
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.8e-32 Score=301.97 Aligned_cols=260 Identities=26% Similarity=0.402 Sum_probs=199.7
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|++.+.||.|++|.||+|+.. ++..||||++..... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999654 689999999865432 2345788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+. ++|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-
Confidence 95 6899999876667799999999999999999999999 999999999999999999999999999876543222
Q ss_pred cccCcccCCCcccchhcccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc-
Q 045553 959 ATTDVAGTFGYVAPEYAMTCR-VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG- 1036 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~- 1036 (1082)
......++..|+|||+..+.. ++.++||||||+++|||++|+.||..... .....+... ..+...+...+.
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~ 228 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFR---TLGTPDEVVWPGV 228 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHH---HhCCCChhhhhhh
Confidence 122335688999999887644 58899999999999999999999863211 011111111 011000000000
Q ss_pred -------------cCC---CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 -------------LWD---CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 -------------l~~---~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
... ........++.+++.+|++.||++||++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 229 TSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred hHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000 0011223567899999999999999999999853
No 296
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=7.2e-32 Score=299.59 Aligned_cols=247 Identities=22% Similarity=0.337 Sum_probs=202.8
Q ss_pred ccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 803 FNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
|...+.||+|++|.||+|.. .+++.||+|++........+.+.+|+.+++.++|||++++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 45567999999999999964 46899999998765555566788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++++|||.+........ ...
T Consensus 101 ~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~~~ 173 (285)
T cd06648 101 GALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-RRK 173 (285)
T ss_pred CCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-ccc
Confidence 999999876 3589999999999999999999999 999999999999999999999999998875543222 223
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|+..|+|||...+..++.++||||||+++|||++|+.||... +.......... ...... . .
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~--------~~~~~~~~~~~-~~~~~~-----~--~ 237 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE--------PPLQAMKRIRD-NLPPKL-----K--N 237 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC--------CHHHHHHHHHh-cCCCCC-----c--c
Confidence 356899999999998888999999999999999999999998632 12233332222 111111 0 1
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
+......+.+++.+|++.+|++||++.++++
T Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 238 LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 1123468999999999999999999999986
No 297
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7.8e-33 Score=314.16 Aligned_cols=240 Identities=24% Similarity=0.312 Sum_probs=187.8
Q ss_pred ecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhcc---CCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 809 IGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRV---QHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 809 lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
||+|+||+||+|+.. +++.||||++..... .....+..|..++... +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999654 589999999864322 2233445566666655 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|.+++.. ...+++..+..++.||++|++|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~ 154 (330)
T cd05586 81 GELFWHLQK--EGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTN 154 (330)
T ss_pred ChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCcc
Confidence 999999876 34689999999999999999999999 99999999999999999999999999987543222 2233
Q ss_pred CcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCC
Q 045553 962 DVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDC 1040 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 1040 (1082)
...||..|+|||++.+. .++.++||||+||++|||++|+.||... ...+..... ..+... . .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~--------~~~~~~~~i-~~~~~~-~-----~-- 217 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE--------DTQQMYRNI-AFGKVR-F-----P-- 217 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC--------CHHHHHHHH-HcCCCC-C-----C--
Confidence 45799999999998764 4789999999999999999999999632 222222222 222110 0 0
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCC----CHHHHHH
Q 045553 1041 GPHDDLIEMLNLAIMCTGESLSSRP----SMRQVAQ 1072 (1082)
Q Consensus 1041 ~~~~~~~~l~~li~~cl~~~p~~RP----t~~ev~~ 1072 (1082)
.......+.+++.+|++.+|++|| ++.|+++
T Consensus 218 -~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 -KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred -CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 012345788999999999999998 4566554
No 298
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.5e-32 Score=300.54 Aligned_cols=254 Identities=26% Similarity=0.423 Sum_probs=202.9
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCC------
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEA------ 870 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~------ 870 (1082)
++++|++.+.||+|++|.||+|... +++.+|+|++..... ..+++.+|+++++++ +|+|++++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 5688999999999999999999764 578999999876543 346789999999999 6999999999986544
Q ss_pred eEEEEEeecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
..++||||+++++|.++++... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCcc
Confidence 4899999999999999987643 46789999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHH
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMT-----CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASML 1023 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1023 (1082)
+........ ......|+..|+|||++.. ..++.++||||||+++|+|++|+.||..... . .. ....
T Consensus 160 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~---~~-~~~~ 230 (275)
T cd06608 160 SAQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP----M---RA-LFKI 230 (275)
T ss_pred ceecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch----H---HH-HHHh
Confidence 986543222 2234568999999998753 3467899999999999999999999963211 1 11 1111
Q ss_pred HhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1024 LLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1024 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
. .+.... + ..+.....++.+++.+|++.||++|||+.|++++
T Consensus 231 ~-~~~~~~-----~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 231 P-RNPPPT-----L--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred h-ccCCCC-----C--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1 111111 1 1123355689999999999999999999999863
No 299
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=4.6e-32 Score=300.05 Aligned_cols=248 Identities=25% Similarity=0.413 Sum_probs=201.0
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccC---CCceeeEeeeeccCCeEEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQ---HPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+++.+|++++++++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477888999999999999975 568999999986542 344567889999999997 999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++++|.++++.. .+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||.+..+....
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998753 689999999999999999999999 99999999999999999999999999998775443
Q ss_pred CccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
. ......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... ..+... .......
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~--------~~~~~~-~~~~~~~----- 220 (277)
T cd06917 156 S-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA--------FRAMML-IPKSKPP----- 220 (277)
T ss_pred c-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh--------hhhhhc-cccCCCC-----
Confidence 2 2233468899999998875 4568899999999999999999999974321 111111 1111111
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+. ....+.++.+++.+|++.+|++||++.|++.+
T Consensus 221 ~~~---~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 221 RLE---DNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCC---cccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 111 11245678999999999999999999999764
No 300
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6e-32 Score=301.17 Aligned_cols=244 Identities=25% Similarity=0.403 Sum_probs=201.8
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36889999999999999999654 58999999986532 233566889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999999874 5689999999999999999999999 9999999999999999999999999999876443
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.....|++.|+|||.+.+...+.++||||||+++|+|++|+.||.... ......... .+..
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~------- 215 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN--------PIQIYEKIL-EGKV------- 215 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHh-cCCc-------
Confidence 233468899999999988888999999999999999999999986321 111111211 2111
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQ 1072 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~ 1072 (1082)
..+......+.+++.+|++.+|++|| +++|+++
T Consensus 216 ---~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 216 ---RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ---cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 11223356889999999999999999 6666654
No 301
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.3e-32 Score=301.88 Aligned_cols=261 Identities=24% Similarity=0.323 Sum_probs=200.3
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCccc-----cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQ-----GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
+|++.+.||+|+||.||+|... +++.||||++...... ....+..|++++++++|+||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778899999999999999754 6899999999765432 234567899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+ +++|.++++... ..+++..+..++.|+++||+|||+. +|+||||+|+||+++.++.++|+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 899999998653 4689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC-------
Q 045553 956 ETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG------- 1027 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 1027 (1082)
.. ......++..|+|||.+.+ ..++.++|||||||++|||++|..||..... ...+..... .....
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~ 229 (298)
T cd07841 156 NR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD----IDQLGKIFE-ALGTPTEENWPG 229 (298)
T ss_pred Cc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc----HHHHHHHHH-HcCCCchhhhhh
Confidence 22 2223356788999998865 4678999999999999999999777653211 011111110 00000
Q ss_pred --CCccccccccCCCC-----ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1028 --RPCEFFTAGLWDCG-----PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1028 --~~~~~~d~~l~~~~-----~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.............. .......+.+++.+|++.+|++||++.||+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000000001 12335678999999999999999999999885
No 302
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=8.8e-32 Score=299.27 Aligned_cols=253 Identities=25% Similarity=0.387 Sum_probs=207.8
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.++.|++.+.||+|++|.||+|... ++..||+|++..... ..+.+.+|++.++.++|+|++++++++......++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4567888999999999999999765 688999999976544 46778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 999999999998753 4799999999999999999999998 999999999999999999999999999876543221
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
......++..|+|||++.+..++.++||||||+++|+|++|+.||... ............+ ....
T Consensus 172 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~--------~~~~~~~~~~~~~-~~~~----- 236 (286)
T cd06614 172 -KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLRE--------PPLRALFLITTKG-IPPL----- 236 (286)
T ss_pred -hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhcC-CCCC-----
Confidence 223345788999999999888999999999999999999999998632 1112222221111 1111
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+..+.+++.+|++.+|.+||++.+|+++
T Consensus 237 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 237 --KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred --cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1112245679999999999999999999999864
No 303
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.9e-31 Score=290.46 Aligned_cols=250 Identities=27% Similarity=0.443 Sum_probs=207.4
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
.|++.+.||+|++|.||+|... ++..+++|++........+.+.+|++.+++++|++++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3778899999999999999765 689999999977655566789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~ 154 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--R 154 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc--c
Confidence 999999998752 5789999999999999999999998 999999999999999999999999999987654432 3
Q ss_pred cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCC
Q 045553 961 TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDC 1040 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 1040 (1082)
....++..|+|||.+.+..++.++||||||+++|+|++|+.||.... .......... .......
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~~~~~------- 218 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP--------PMKALFKIAT-NGPPGLR------- 218 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc--------hHHHHHHHHh-cCCCCcC-------
Confidence 34568899999999998889999999999999999999999986321 1122222111 1111111
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1041 GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1041 ~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+......+.+++.+|++.+|++||++.|++++
T Consensus 219 ~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 219 NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111225679999999999999999999999863
No 304
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=6.4e-32 Score=298.82 Aligned_cols=247 Identities=23% Similarity=0.401 Sum_probs=202.4
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
-|++.+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|++.+++++|||++++++++..+...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 477888999999999999965 468899999986443 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++........ .
T Consensus 85 ~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~-~ 157 (277)
T cd06641 85 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-K 157 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchh-h
Confidence 99999999874 3589999999999999999999999 999999999999999999999999999876643221 2
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
.....++..|+|||...+...+.++|||||||++|+|++|..||.... ...+.... ..+...
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~-~~~~~~--------- 219 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH--------PMKVLFLI-PKNNPP--------- 219 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc--------hHHHHHHH-hcCCCC---------
Confidence 223467889999999998889999999999999999999999986321 11222221 111111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+.++.+++.+|++.+|++||++.+++++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 220 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1122345678899999999999999999999985
No 305
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.3e-33 Score=307.96 Aligned_cols=245 Identities=24% Similarity=0.416 Sum_probs=198.7
Q ss_pred cccceecccCceEEEEE-EEcCCeEEEEEEeec---C-ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCe--EEEEE
Q 045553 804 NVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSV---G-RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE--MFLIY 876 (1082)
Q Consensus 804 ~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~---~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lV~ 876 (1082)
++..+||+|+|-+||+| .-.+|..||=-.++. . .....+.|..|+++++.++||||++++.++.+... ..+|.
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 44578999999999999 444576766333221 1 23445789999999999999999999999887654 78899
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-CCcEEEeecccceecCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-NLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGla~~~~~~ 955 (1082)
|.+..|+|..|.+++ +..+...+..|++||++||.|||++ .|+|+|||||..||+|+. .|.|||+|.|+|..+...
T Consensus 123 EL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999999985 4688889999999999999999997 779999999999999975 589999999999987543
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.. ..+.|||.|||||++. ..|++..||||||+.++||+|+.-||.++ .+..+..+.+..+-.+. .+..
T Consensus 200 ~a---ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC-------~n~AQIYKKV~SGiKP~-sl~k 267 (632)
T KOG0584|consen 200 HA---KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC-------TNPAQIYKKVTSGIKPA-ALSK 267 (632)
T ss_pred cc---ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh-------CCHHHHHHHHHcCCCHH-Hhhc
Confidence 22 2378999999999988 78999999999999999999999998754 34456555555443332 2221
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
- ...++.++|.+|+.. .++||++.|++.
T Consensus 268 V--------~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 268 V--------KDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred c--------CCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 1 124789999999999 999999999976
No 306
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.9e-32 Score=301.55 Aligned_cols=262 Identities=22% Similarity=0.317 Sum_probs=197.3
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++|++.+.||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57889999999999999999654 689999999865432 2234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
++ ++|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.++.......
T Consensus 85 ~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~- 158 (291)
T cd07844 85 LD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK- 158 (291)
T ss_pred CC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCCc-
Confidence 96 59999987653 4789999999999999999999999 999999999999999999999999999875432211
Q ss_pred cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc------
Q 045553 959 ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE------ 1031 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 1031 (1082)
......++..|+|||++.+ ..++.++||||+|+++|||++|+.||...... ......+...........
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV----EDQLHKIFRVLGTPTEETWPGVSS 234 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH----HHHHHHHHHhcCCCChhhhhhhhh
Confidence 1122346889999999875 45789999999999999999999998643210 000000000000000000
Q ss_pred ---ccc--------cccCCCC-ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1032 ---FFT--------AGLWDCG-PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1032 ---~~d--------~~l~~~~-~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
... ..+.... .......+.+++.+|++.+|++||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 235 NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000 0000000 0111267789999999999999999999875
No 307
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=8.8e-32 Score=300.41 Aligned_cols=263 Identities=25% Similarity=0.329 Sum_probs=199.9
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccc--cHHHHHHHHHHHhccCCCceeeEeeeeccC--CeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQ--GVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV 875 (1082)
++|++.+.||+|+||.||+|... +++.||+|.++..... ....+.+|++++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 57889999999999999999765 5889999999754322 234567899999999999999999998776 889999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+..+...
T Consensus 85 ~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99996 59999987653 3689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHH------------HHHH
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVA------------WASM 1022 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~------------~~~~ 1022 (1082)
.. ......++..|+|||.+.+. .++.++||||+|+++|||++|+.||...... ..... |...
T Consensus 160 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 234 (293)
T cd07843 160 LK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI----DQLNKIFKLLGTPTEKIWPGF 234 (293)
T ss_pred cc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHhCCCchHHHHHh
Confidence 22 22234578899999998764 4688999999999999999999998642110 00000 1000
Q ss_pred HHhc----CCCccccccccCCCCChH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1023 LLLQ----GRPCEFFTAGLWDCGPHD-DLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1023 ~~~~----~~~~~~~d~~l~~~~~~~-~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.... ..........+....+.. ....+.+++.+|++.+|++||++.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 235 SELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000 000000011111111222 35678999999999999999999999863
No 308
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.3e-31 Score=301.05 Aligned_cols=247 Identities=28% Similarity=0.388 Sum_probs=199.1
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
...|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++|||++++.+++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 356888999999999999999654 689999999864432 2345688999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||++ |++.+++... ...+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++......
T Consensus 94 ~e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 94 MEYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HHhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 99996 6787777654 34689999999999999999999999 9999999999999999999999999999765322
Q ss_pred CCccccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
....++..|+|||++. ...++.++||||||+++|||++|+.||.... ......... ......
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~--------~~~~~~~~~-~~~~~~- 233 (307)
T cd06607 169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIA-QNDSPT- 233 (307)
T ss_pred -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc--------HHHHHHHHh-cCCCCC-
Confidence 2346788999999874 4568889999999999999999999986321 111111111 111111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+..+.+++.+||+.+|++||++.+|+.+
T Consensus 234 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 234 -------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred -------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 1123355689999999999999999999999875
No 309
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-33 Score=305.00 Aligned_cols=251 Identities=23% Similarity=0.397 Sum_probs=209.9
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
-|.|..-||.|+||.||+|..+ ++-..|.|++........+.|.-|++++....||+||++++.|..++..|+..|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 4667777999999999999544 455668888887777888999999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
||-++..+-.- ++.+++.++..++.|++.||.|||+. .|||||||+.|||++-+|.++++|||.+.... ......
T Consensus 113 GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~-~t~qkR 187 (1187)
T KOG0579|consen 113 GGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNK-STRQKR 187 (1187)
T ss_pred CchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccch-hHHhhh
Confidence 99999888765 56899999999999999999999999 99999999999999999999999999986432 222345
Q ss_pred cCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 961 TDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
..+.||+.|||||+.. ..+|+.++||||||+.+.||..+.+|-.. .+...++.. +....++..+
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe--------lnpMRVllK-iaKSePPTLl-- 256 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE--------LNPMRVLLK-IAKSEPPTLL-- 256 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc--------cchHHHHHH-HhhcCCCccc--
Confidence 6789999999999874 57899999999999999999999988652 222333222 2223333332
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.|..+...+.+++.+|+..+|..||++++++++
T Consensus 257 -----qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 257 -----QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred -----CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 355778899999999999999999999998864
No 310
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.2e-31 Score=297.81 Aligned_cols=258 Identities=26% Similarity=0.400 Sum_probs=199.7
Q ss_pred ccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 803 FNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
|++.+.||.|++|.||+|.. .+|..||+|++..... ...+.+.+|++.+++++|||++++++++.+....++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 67788999999999999965 4699999999875432 23456888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
+++|.+++.......+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||.+..+......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~- 155 (283)
T cd07835 81 -DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT- 155 (283)
T ss_pred -CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc-
Confidence 57999999876555789999999999999999999999 9999999999999999999999999999765432221
Q ss_pred ccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc-------
Q 045553 960 TTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE------- 1031 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 1031 (1082)
.....++..|+|||++.+. .++.++||||||+++|||++|+.||..... ........+. .+...+
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~ 228 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE----IDQLFRIFRT---LGTPDEDVWPGVT 228 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHH---hCCCChHHhhhhh
Confidence 2223568899999988664 578899999999999999999999864211 0111111110 000000
Q ss_pred -----------ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 -----------FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 -----------~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...... ..........+.+++.+|++.+|++||++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 229 SLPDYKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hchhhhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000 00112334678899999999999999999999853
No 311
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.6e-31 Score=298.11 Aligned_cols=262 Identities=21% Similarity=0.299 Sum_probs=198.0
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++++|.+.+.||+|+||.||+|.. .++..||+|++..... .....+.+|+++++.++|+||+++.+++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 457899999999999999999964 4689999999865432 22346788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+. +++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 83 EYMH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred eccc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 9995 7887777654 34578888999999999999999999 99999999999999999999999999997643322
Q ss_pred CccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC-------
Q 045553 957 THATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR------- 1028 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------- 1028 (1082)
. ......++..|+|||++.+. .++.++|||||||++|||++|+.||+..... ...........+.
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~------~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 158 Q-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV------FEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred C-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH------HHHHHHHHHHcCCCChhhhh
Confidence 1 12334578899999998764 5788999999999999999999999743211 1111111000000
Q ss_pred ----CccccccccCCCCC---------hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1029 ----PCEFFTAGLWDCGP---------HDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1029 ----~~~~~d~~l~~~~~---------~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
..+..........+ ......+.+++.+|++.||++|||+.|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000000 112457889999999999999999999875
No 312
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=4.7e-35 Score=319.74 Aligned_cols=371 Identities=27% Similarity=0.378 Sum_probs=258.2
Q ss_pred CCCCEEeCcCCCCC-CCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEE
Q 045553 134 SLLEILDLSFNSFH-GPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHI 212 (1082)
Q Consensus 134 ~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L 212 (1082)
+-.+-.|+++|.++ +..|..+..+++++.|-|...++. .+|+.++.+ .+|++|
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~l-------------------------qkLEHL 60 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRL-------------------------QKLEHL 60 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHH-------------------------hhhhhh
Confidence 33444555555555 335555555555555555555554 444444444 444444
Q ss_pred EcccCccCCCCCccccCCCCccEEEccCCcCCC-CcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccC
Q 045553 213 LLAANSLTGSIPPSLGNCTELRSLLLSSNMLQG-DIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYG 291 (1082)
Q Consensus 213 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~ 291 (1082)
.+++|++. .+-..++.++.|+.+.+.+|++.. -+|..+-.+..|+.||||+|+++ ..|..+...+++-+|
T Consensus 61 s~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVL------- 131 (1255)
T KOG0444|consen 61 SMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVL------- 131 (1255)
T ss_pred hhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEE-------
Confidence 44444444 444456667777777777777752 25666667777777777777776 455554444333333
Q ss_pred CcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCcc
Q 045553 292 PLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPAS 371 (1082)
Q Consensus 292 ~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~ 371 (1082)
++++|+|..++..-|.++..|-+||||+|++. .+|..
T Consensus 132 ------------------------------------------NLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ 168 (1255)
T KOG0444|consen 132 ------------------------------------------NLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQ 168 (1255)
T ss_pred ------------------------------------------EcccCccccCCchHHHhhHhHhhhccccchhh-hcCHH
Confidence 33334444444444556666777777777777 67777
Q ss_pred ccCCCCCCEEecCCCcCcccC-CCCcccCcccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccc
Q 045553 372 LGNCKSLYFLDLSSNNLTGLL-PEEVSVPCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENAL 450 (1082)
Q Consensus 372 ~~~l~~L~~L~Ls~N~l~~~~-p~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (1082)
+..+..|+.|+|++|++...- -..-++++|++|.+++-+=
T Consensus 169 ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqR--------------------------------------- 209 (1255)
T KOG0444|consen 169 IRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQR--------------------------------------- 209 (1255)
T ss_pred HHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccc---------------------------------------
Confidence 777777777777777765321 1111223333333332211
Q ss_pred cCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcc
Q 045553 451 TSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKL 530 (1082)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l 530 (1082)
.+..+|..+..+.+|..+|+|.|.+
T Consensus 210 -------------------------------------------------------Tl~N~Ptsld~l~NL~dvDlS~N~L 234 (1255)
T KOG0444|consen 210 -------------------------------------------------------TLDNIPTSLDDLHNLRDVDLSENNL 234 (1255)
T ss_pred -------------------------------------------------------hhhcCCCchhhhhhhhhccccccCC
Confidence 1234455555666777899999999
Q ss_pred cccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCc-cCch
Q 045553 531 IGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTG-AIPW 609 (1082)
Q Consensus 531 ~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~ 609 (1082)
. .+|+.++. +.+|+.|+||+|+|+.. ........+|++|+||.|+++ .+|+++..|++|+.|++.+|+++- -+|.
T Consensus 235 p-~vPecly~-l~~LrrLNLS~N~iteL-~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPS 310 (1255)
T KOG0444|consen 235 P-IVPECLYK-LRNLRRLNLSGNKITEL-NMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPS 310 (1255)
T ss_pred C-cchHHHhh-hhhhheeccCcCceeee-eccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCcc
Confidence 8 89999886 46799999999999954 344556678999999999999 899999999999999999999873 4899
Q ss_pred hhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC
Q 045553 610 ELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN 682 (1082)
Q Consensus 610 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 682 (1082)
.++.|..|+.+..++|++. ..|+.++.+..|+.|.|++|++- ++|+.+.-++.|+.||+..|+=-.-.|..
T Consensus 311 GIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP 381 (1255)
T KOG0444|consen 311 GIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKP 381 (1255)
T ss_pred chhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCc
Confidence 9999999999999999999 89999999999999999999999 89999999999999999999765555543
No 313
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.98 E-value=9.9e-32 Score=298.42 Aligned_cols=251 Identities=27% Similarity=0.413 Sum_probs=195.1
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHH-HhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRT-LGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
++|++.+.||+|+||.||+|... +|+.||+|++..... ....++..|+.. ++..+|||++++++++..+...++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36889999999999999999654 689999999875432 233455556664 667789999999999999999999999
Q ss_pred ecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 878 YLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|++ |+|.++++.. ....+++..+..++.|++.|++|||+.+ +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 995 7898888653 2356899999999999999999999854 8999999999999999999999999999865332
Q ss_pred CCccccCcccCCCcccchhccc----CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMT----CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
. ......|+..|+|||++.+ ..++.++||||+|+++|||++|+.||...... . +......... ...
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~-~~~~~~~~~~-~~~ 227 (283)
T cd06617 158 V--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP------F-QQLKQVVEEP-SPQ 227 (283)
T ss_pred c--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC------H-HHHHHHHhcC-CCC
Confidence 1 1223468889999998865 45688999999999999999999998632111 1 1111221111 111
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
. .....+.++.+++.+|++.+|++||++.++++
T Consensus 228 ~--------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 228 L--------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred C--------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 01123467899999999999999999999986
No 314
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.98 E-value=1.9e-31 Score=297.85 Aligned_cols=261 Identities=26% Similarity=0.347 Sum_probs=198.6
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
++|++.+.||+|++|.||+|... +++.||+|++..... ...+.+.+|++++++++|||++++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46889999999999999999754 688999999865432 234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-CCcEEEeecccceecCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-NLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGla~~~~~~~ 956 (1082)
|++ +++.+++.......+++..+..++.||+.||+|||+. +++||||+|+||+++. ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 995 6888888765555578899999999999999999999 9999999999999985 5679999999997654322
Q ss_pred CccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC-Cccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR-PCEFFT 1034 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d 1034 (1082)
. ......++..|+|||++.+ ..++.++||||+|+++|+|++|+.||..... .....+.....+. .....+
T Consensus 158 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~~ 229 (294)
T PLN00009 158 R-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE-------IDELFKIFRILGTPNEETWP 229 (294)
T ss_pred c-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHHHhCCCChhhcc
Confidence 1 2223457889999998876 4578999999999999999999999863211 1111111110000 000000
Q ss_pred ------------cccCC----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 ------------AGLWD----CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ------------~~l~~----~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+.... ........++.+++.+|++.+|++||++.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 230 GVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred ccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0012234568999999999999999999999863
No 315
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.98 E-value=2e-31 Score=305.43 Aligned_cols=258 Identities=23% Similarity=0.312 Sum_probs=199.4
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccC------
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------ 869 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 869 (1082)
...+|++.+.||+|+||.||+|.. .+++.||+|++... .......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999964 46899999998643 223445677899999999999999999987643
Q ss_pred CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
...++||||+. ++|.+++... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35799999995 6888888642 88999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHH------
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASML------ 1023 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 1023 (1082)
+...... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||.... ....|....
T Consensus 166 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~ 236 (353)
T cd07850 166 RTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTD-------HIDQWNKIIEQLGTP 236 (353)
T ss_pred eeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHHhcCCC
Confidence 8764322 2233467899999999999999999999999999999999999986431 111111111
Q ss_pred ---------------HhcCCC------ccccccc----cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1024 ---------------LLQGRP------CEFFTAG----LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1024 ---------------~~~~~~------~~~~d~~----l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...... .+.+... .....+......+.+++.+|++.||++||++.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 237 SDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred CHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000 0000000 0001122345678999999999999999999999865
No 316
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.98 E-value=3.5e-32 Score=297.65 Aligned_cols=247 Identities=26% Similarity=0.322 Sum_probs=204.0
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
+|++.+.||.|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4888999999999999999765 589999999975432 346788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++++|.+++... ..+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999864 4789999999999999999999999 99999999999999999999999999998764332
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
......|+..|+|||++.+..++.++||||+|+++|+|++|+.||..... . ...+........
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~-~~~~~~~~~~~~---------- 217 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSR-----T-IRDQIRAKQETA---------- 217 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCc-----c-HHHHHHHHhccc----------
Confidence 22335688899999999988899999999999999999999999874321 1 122222211110
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCH--HHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSM--RQVA 1071 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~--~ev~ 1071 (1082)
....+...+..+.+++.+|++.+|++||++ +|+.
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 218 DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 112233445789999999999999999999 6654
No 317
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.98 E-value=1.6e-31 Score=298.03 Aligned_cols=259 Identities=19% Similarity=0.265 Sum_probs=187.3
Q ss_pred hcCccccceecccCceEEEEEEEcC----CeEEEEEEeecCccccH-----------HHHHHHHHHHhccCCCceeeEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP----GVVVAVKRLSVGRFQGV-----------QQFAAEIRTLGRVQHPNLVTLIG 864 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~l~~ 864 (1082)
..+|++.++||+|+||.||+|...+ +..+|+|+......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3579999999999999999997654 34666665433321110 11223445566778999999998
Q ss_pred eeccCC----eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc
Q 045553 865 YHVSEA----EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN 940 (1082)
Q Consensus 865 ~~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 940 (1082)
++.... ..++++|++ ..++.+.+... ...++..+..++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCc
Confidence 765443 347788877 34777776543 3457888999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCCc------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCc
Q 045553 941 AYLSDFGLARLLGTSETH------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGF 1014 (1082)
Q Consensus 941 ~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~ 1014 (1082)
++|+|||+|+.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~----~~ 240 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGH----NG 240 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcccc----ch
Confidence 999999999876432211 12234699999999999999999999999999999999999999974311 11
Q ss_pred cHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1015 NIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
............. ...... .....+..+.+++..|++.+|++||++.++++.+.
T Consensus 241 ~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 241 NLIHAAKCDFIKR----LHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHhHHHHHHH----hhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1111111100000 000000 01233567999999999999999999999998763
No 318
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.98 E-value=1.8e-31 Score=291.91 Aligned_cols=251 Identities=28% Similarity=0.411 Sum_probs=207.9
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeEEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEMFLIY 876 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 876 (1082)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++.+++++|||++++++.+... ...++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999765 689999999876543 4567889999999999999999999999888 8999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999998753 789999999999999999999998 99999999999999999999999999998775443
Q ss_pred Cc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 TH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.. ......++..|+|||...+...+.++||||||+++|+|++|+.||.... ..............
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~------- 221 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-------NPMAALYKIGSSGE------- 221 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------chHHHHHhccccCC-------
Confidence 21 1233568899999999998889999999999999999999999997432 11111111111111
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+......+.+++.+|++.+|++||++.|++++
T Consensus 222 --~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 222 --PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred --CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 112233446789999999999999999999999864
No 319
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.98 E-value=6.8e-32 Score=300.54 Aligned_cols=254 Identities=27% Similarity=0.408 Sum_probs=196.8
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|...+.||+|+||.||++.. .+++.||+|++.... ......+.+|+..+.++. |+||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 455667899999999999965 458999999986543 234567889999999996 99999999999999999999999
Q ss_pred cCCCCHHHHH---hhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 879 LPGGNLEKFI---QDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 879 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
+. +++.++. .......+++..+.+++.|++.|++|||+.. +|+||||||+||+++.++.++|+|||+++.....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 85 5665543 3333467899999999999999999999743 8999999999999999999999999999765432
Q ss_pred CCccccCcccCCCcccchhcccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTC---RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
... ....|+..|+|||++.+. .++.++||||+||++|||++|+.||.... ...+.+..... +..
T Consensus 162 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~-~~~--- 228 (288)
T cd06616 162 IAK--TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-------SVFDQLTQVVK-GDP--- 228 (288)
T ss_pred Ccc--ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-------hHHHHHhhhcC-CCC---
Confidence 221 223578899999998776 68899999999999999999999986321 11122222111 111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+.+....+...+.++.+++.+|++.+|++||++.||+++
T Consensus 229 --~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 229 --PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred --CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111223456689999999999999999999999875
No 320
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.98 E-value=1.5e-31 Score=297.51 Aligned_cols=261 Identities=26% Similarity=0.325 Sum_probs=200.3
Q ss_pred ccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeEEEEEe
Q 045553 803 FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEMFLIYN 877 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV~E 877 (1082)
|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 667889999999999999765 48999999997653 33456788999999999999999999999887 89999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|++ ++|.+++... ...+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+........
T Consensus 81 ~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMD-HDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-ccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 996 5899888764 25789999999999999999999999 999999999999999999999999999987755443
Q ss_pred ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc---c-
Q 045553 958 HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE---F- 1032 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~- 1032 (1082)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ......+........... .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-----LEQLEKIFELCGSPTDENWPGVS 230 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCchhhccccc
Confidence 23334457889999998765 4578999999999999999999999864321 111111111100000000 0
Q ss_pred -------------cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 -------------FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 -------------~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+........+..+.+++.+|++.+|++||++.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 231 KLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred cchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000000011125678999999999999999999999863
No 321
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.98 E-value=2.6e-31 Score=290.42 Aligned_cols=250 Identities=26% Similarity=0.441 Sum_probs=208.4
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|++.+.||+|+||.||+|... ++..||+|++..... ...+.+.+|+++++.++|||++++.+.+......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4788899999999999999654 589999999976543 4567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 879 LPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
+++++|.+++.... ...+++..+..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999998753 46799999999999999999999999 99999999999999999999999999998765443
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
. ......|++.|+|||...+..++.++||||+|+++++|++|+.||+.. ...+........ ...
T Consensus 158 ~-~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~--------~~~~~~~~~~~~-~~~------ 221 (258)
T cd08215 158 D-LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE--------NLLELALKILKG-QYP------ 221 (258)
T ss_pred c-eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCC--------cHHHHHHHHhcC-CCC------
Confidence 1 223346889999999999888999999999999999999999998632 122332332221 111
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+|++.+|++||++.|++++
T Consensus 222 ---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 222 ---PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1222445688999999999999999999999863
No 322
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.98 E-value=2e-31 Score=301.10 Aligned_cols=268 Identities=22% Similarity=0.331 Sum_probs=198.8
Q ss_pred CccccceecccCceEEEEEEEc---CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII---PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEMF 873 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 873 (1082)
+|++.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999754 47999999997633 33346678899999999999999999999988 7899
Q ss_pred EEEeecCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC----CCcEEEeec
Q 045553 874 LIYNYLPGGNLEKFIQDRP---RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN----NLNAYLSDF 946 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~----~~~~kl~Df 946 (1082)
+||||++ +++.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999996 57777765432 23689999999999999999999999 9999999999999999 999999999
Q ss_pred ccceecCCCCC--ccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCc-----cHHH
Q 045553 947 GLARLLGTSET--HATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGF-----NIVA 1018 (1082)
Q Consensus 947 Gla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~-----~~~~ 1018 (1082)
|++........ .......++..|+|||++.+. .++.++||||||+++|||++|+.||........... .+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987643322 122345678999999988764 578999999999999999999999975432210000 0011
Q ss_pred HHHHH-----------HhcCCCccccccccCCCCC---------h--HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1019 WASML-----------LLQGRPCEFFTAGLWDCGP---------H--DDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1019 ~~~~~-----------~~~~~~~~~~d~~l~~~~~---------~--~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
++... ..........+.......+ . ....++.+++.+|++.+|++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 10000 0000000000000000011 0 234578999999999999999999999863
No 323
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.98 E-value=5e-31 Score=297.56 Aligned_cols=248 Identities=27% Similarity=0.400 Sum_probs=198.9
Q ss_pred ccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 803 FNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
|+..+.||+|+||.||+|.. .++..||+|++..... .....+.+|++++++++|||++++++++.++...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 67788999999999999975 4689999999865422 2345788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
++ |++.+++... ...+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++......
T Consensus 107 ~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~--- 178 (317)
T cd06635 107 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA--- 178 (317)
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc---
Confidence 96 5888877654 45689999999999999999999999 9999999999999999999999999998754322
Q ss_pred cccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 959 ATTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
....|+..|+|||++. ++.++.++|||||||++|||++|+.||... ............+...
T Consensus 179 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~--------~~~~~~~~~~~~~~~~----- 243 (317)
T cd06635 179 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--------NAMSALYHIAQNESPT----- 243 (317)
T ss_pred --ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCc--------cHHHHHHHHHhccCCC-----
Confidence 2346888999999974 456889999999999999999999998632 1111122222221111
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
.........+.+++.+|++.+|.+||++.+|+++...+
T Consensus 244 ----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 244 ----LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred ----CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 11123456789999999999999999999999876443
No 324
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.98 E-value=9.9e-32 Score=293.60 Aligned_cols=248 Identities=25% Similarity=0.394 Sum_probs=204.9
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|++.+.||+|+||.||+|+. .++..+|+|.+.... .....++.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 478889999999999999954 468899999987543 23455778899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 879 LPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
+++++|.+++.... ...+++..++.++.|++.|++|||+. +++||||+|+||+++.++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99999999987632 35689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
......++..|+|||...+..++.++|+||+|+++|||++|+.||.... ....... ...+...
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~--------~~~~~~~-~~~~~~~------ 219 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS--------MQDLRYK-VQRGKYP------ 219 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHH-HhcCCCC------
Confidence 2223457889999999999999999999999999999999999986321 1121111 1222111
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+.....++.+++.+|++.+|++||++.|++++
T Consensus 220 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 220 ---PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred ---CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1223456789999999999999999999999864
No 325
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.98 E-value=4.5e-31 Score=290.09 Aligned_cols=250 Identities=19% Similarity=0.279 Sum_probs=196.2
Q ss_pred HHHHHHHhcCcccccee--cccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeecc
Q 045553 793 YENVVRATAGFNVQNCI--GSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVS 868 (1082)
Q Consensus 793 ~~~~~~~~~~~~~~~~l--g~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 868 (1082)
..+.....++|++.+.+ |+|+||.||++.. .++..+|+|.+........ |+.....+ +|||++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence 34455556778888877 9999999999964 4688899999865432211 22222222 79999999999999
Q ss_pred CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-cEEEeecc
Q 045553 869 EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL-NAYLSDFG 947 (1082)
Q Consensus 869 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfG 947 (1082)
.+..++||||+++++|.+++... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++ .++|+|||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 99999999999999999999874 3789999999999999999999999 999999999999999998 99999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
.++...... ...|+..|+|||++.+..++.++||||+|+++|||++|+.||..... .......+.... ..
T Consensus 156 ~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~--~~ 225 (267)
T PHA03390 156 LCKIIGTPS-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED---EELDLESLLKRQ--QK 225 (267)
T ss_pred cceecCCCc-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc---chhhHHHHHHhh--cc
Confidence 998654322 23588999999999998999999999999999999999999973321 122223332222 11
Q ss_pred CCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 045553 1028 RPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS-MRQVAQ 1072 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt-~~ev~~ 1072 (1082)
.. ..+...+..+.+++.+|++.+|++||+ +.|+++
T Consensus 226 -~~---------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 -KL---------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -cC---------CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 112245568999999999999999995 688875
No 326
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=2.8e-33 Score=331.44 Aligned_cols=252 Identities=29% Similarity=0.438 Sum_probs=207.0
Q ss_pred HhcCccccceecccCceEEEEE-EEcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.+-+|+-...||.|.||.||.| ...+|...|||.++... ....+.+.+|+.++..++|||+|+++|+-.+.+..+|.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 4456778889999999999999 56679999999987543 33456688999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
||||++|+|.+.++. ++..++.....+..|++.|++|||+. |||||||||.||+++.+|.+|.+|||.|..+...
T Consensus 1313 MEyC~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHHhccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 999999999999986 34566666677889999999999999 9999999999999999999999999999987544
Q ss_pred CC---ccccCcccCCCcccchhcccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHH-HhcCC
Q 045553 956 ET---HATTDVAGTFGYVAPEYAMTC---RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASML-LLQGR 1028 (1082)
Q Consensus 956 ~~---~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~ 1028 (1082)
.. .......||+.|||||++.+. ....++||||+|||+.||+||++||..... .|.... +..|.
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn---------e~aIMy~V~~gh 1458 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN---------EWAIMYHVAAGH 1458 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc---------hhHHHhHHhccC
Confidence 31 233467899999999999763 345689999999999999999999974321 233322 12222
Q ss_pred CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+ ..|...+.+-.+++.+|+..||++|.++.|++++
T Consensus 1459 ~P---------q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 KP---------QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred CC---------CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 22 3456677788999999999999999888877654
No 327
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=1.7e-31 Score=295.37 Aligned_cols=244 Identities=25% Similarity=0.309 Sum_probs=195.1
Q ss_pred ecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 809 IGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 809 lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
||+|+||+||+|.. .+|+.||+|.+.... ......+.+|++++++++|||++++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999954 468999999986432 22344567899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcc
Q 045553 885 EKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVA 964 (1082)
Q Consensus 885 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 964 (1082)
.+++.......+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+...... .......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKGRA 155 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC--Ccccccc
Confidence 9999876556799999999999999999999999 9999999999999999999999999998765432 1223346
Q ss_pred cCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChH
Q 045553 965 GTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHD 1044 (1082)
Q Consensus 965 gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1044 (1082)
++..|+|||++.+..++.++||||+|+++|+|++|+.||...... ...... ...... . ....+..
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~-~~~~~~----~------~~~~~~~ 220 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK----VEKEEL-KRRTLE----M------AVEYPDK 220 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc----ccHHHH-Hhcccc----c------cccCCcc
Confidence 788999999998888999999999999999999999999643211 011111 110000 0 0112233
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045553 1045 DLIEMLNLAIMCTGESLSSRP-----SMRQVAQ 1072 (1082)
Q Consensus 1045 ~~~~l~~li~~cl~~~p~~RP-----t~~ev~~ 1072 (1082)
....+.+++.+|++.+|++|| ++.+++.
T Consensus 221 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 221 FSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 456889999999999999999 6666654
No 328
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=8.7e-32 Score=320.40 Aligned_cols=266 Identities=22% Similarity=0.255 Sum_probs=190.6
Q ss_pred HhcCccccceecccCceEEEEEEEcC--CeEEEEE------------------EeecCccccHHHHHHHHHHHhccCCCc
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIP--GVVVAVK------------------RLSVGRFQGVQQFAAEIRTLGRVQHPN 858 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~--~~~vavK------------------~~~~~~~~~~~~~~~e~~~l~~l~h~n 858 (1082)
...+|++.+.||+|+||+||++.... +..+++| .+. ........+.+|++++++++|||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence 45689999999999999999985432 2222222 111 11123456789999999999999
Q ss_pred eeeEeeeeccCCeEEEEEeecCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE
Q 045553 859 LVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRP---RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL 935 (1082)
Q Consensus 859 iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 935 (1082)
|+++++++...+..|+|+|++ ++++.+++.... ........+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 999999999999999999999 567887775432 12234566788999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCcc
Q 045553 936 DNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFN 1015 (1082)
Q Consensus 936 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~ 1015 (1082)
+.++.+||+|||+++.+............|+..|+|||++.+..++.++|||||||++|||++|+.++..... ...
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~----~~~ 376 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGG----GKP 376 (501)
T ss_pred CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCC----CCH
Confidence 9999999999999987765444444456799999999999999999999999999999999998754332111 111
Q ss_pred HHHHHHHHHhcCCCc-cccc----------cccCCCC----C-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1016 IVAWASMLLLQGRPC-EFFT----------AGLWDCG----P-----HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1016 ~~~~~~~~~~~~~~~-~~~d----------~~l~~~~----~-----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+..+....-+... ++.+ ....... + ......+.+++.+|++.||++||++.|++++
T Consensus 377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 111111111000000 0000 0000000 0 0123457788999999999999999999864
No 329
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-34 Score=332.58 Aligned_cols=471 Identities=27% Similarity=0.295 Sum_probs=336.7
Q ss_pred ccccccCCCCCCEEEcccCCCcccCC-hhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccC
Q 045553 102 LSRAIGDLTQLRVLLLAFNGFSGELP-LEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQ 180 (1082)
Q Consensus 102 l~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 180 (1082)
||..+..-..|+.|+++.|.+. ..| +.+.+--+|+.|||++|++. ..|..+..+.+|+.|+++.|-|. .+|....+
T Consensus 13 ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~ 89 (1081)
T KOG0618|consen 13 IPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSN 89 (1081)
T ss_pred cchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhh
Confidence 5555666666899999999877 334 33444556999999999998 89999999999999999999999 78899999
Q ss_pred CCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEE
Q 045553 181 SPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVL 260 (1082)
Q Consensus 181 l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 260 (1082)
+.+|++|.|.+|++. .+|..+. .+.+|++|+++.|++. .+|..+..++.+..+..++|..... ++... ++.+
T Consensus 90 ~~~l~~lnL~~n~l~-~lP~~~~-~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~ 161 (1081)
T KOG0618|consen 90 MRNLQYLNLKNNRLQ-SLPASIS-ELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQR----LGQTS-IKKL 161 (1081)
T ss_pred hhcchhheeccchhh-cCchhHH-hhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhh----hcccc-chhh
Confidence 999999999999998 8998886 6899999999999999 8899999999999999999932212 33333 8899
Q ss_pred eCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcc
Q 045553 261 DLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNL 340 (1082)
Q Consensus 261 ~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l 340 (1082)
++..|.+.+.++..+..++. .|+|+.|.+.. -.+..+.+|+.+....|++
T Consensus 162 ~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~----------------------------~dls~~~~l~~l~c~rn~l 211 (1081)
T KOG0618|consen 162 DLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEV----------------------------LDLSNLANLEVLHCERNQL 211 (1081)
T ss_pred hhhhhhcccchhcchhhhhe--eeecccchhhh----------------------------hhhhhccchhhhhhhhccc
Confidence 99999999888888887776 68998875441 1233444555555555544
Q ss_pred cCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcceecCCCCCC
Q 045553 341 EGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLSGEIPRISH 420 (1082)
Q Consensus 341 ~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~~~~~~~~~ 420 (1082)
....- ..++|+.|+.++|.++...+ .+ .-.+|+++|+++|++++.+.....+.+|+.+++.+|.|+..+-++..
T Consensus 212 s~l~~----~g~~l~~L~a~~n~l~~~~~-~p-~p~nl~~~dis~n~l~~lp~wi~~~~nle~l~~n~N~l~~lp~ri~~ 285 (1081)
T KOG0618|consen 212 SELEI----SGPSLTALYADHNPLTTLDV-HP-VPLNLQYLDISHNNLSNLPEWIGACANLEALNANHNRLVALPLRISR 285 (1081)
T ss_pred ceEEe----cCcchheeeeccCcceeecc-cc-ccccceeeecchhhhhcchHHHHhcccceEecccchhHHhhHHHHhh
Confidence 43211 12445555555555542111 11 12345555555555554442222445555555555555311111100
Q ss_pred cccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccceeeecc
Q 045553 421 SECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSG 500 (1082)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~ 500 (1082)
+ +++ ..+....
T Consensus 286 -----~---~~L-------------------------------------------------------------~~l~~~~ 296 (1081)
T KOG0618|consen 286 -----I---TSL-------------------------------------------------------------VSLSAAY 296 (1081)
T ss_pred -----h---hhH-------------------------------------------------------------HHHHhhh
Confidence 0 000 0000111
Q ss_pred CCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCc-ccEEEccCCcccccCccccCCCCCCCEEEccCCCC
Q 045553 501 NSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKC-MKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHL 579 (1082)
Q Consensus 501 n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~-L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 579 (1082)
|. +..+|........+++|||..|++. .+|+..+.-... |+.|..+.|.+....--.=..+..|+.|+|.+|.+
T Consensus 297 ne----l~yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~L 371 (1081)
T KOG0618|consen 297 NE----LEYIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHL 371 (1081)
T ss_pred hh----hhhCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcc
Confidence 11 1122233333445679999999988 888877765543 88888899998855422233467899999999999
Q ss_pred CCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCC
Q 045553 580 QGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGF 659 (1082)
Q Consensus 580 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 659 (1082)
+...-..+.+...|+.|+|++|++.......+.++..|+.|+||+|+++ .+|.....++.|++|...+|+|. ..| .+
T Consensus 372 td~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~ 448 (1081)
T KOG0618|consen 372 TDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-EL 448 (1081)
T ss_pred cccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hh
Confidence 9877778999999999999999999555555799999999999999999 88999999999999999999999 777 88
Q ss_pred CCCCcccEEeccCCcccc-CCCCC---cccccccCCCCCCC
Q 045553 660 GTRSSLSIFDVSFNNLSG-SAPRN---SLIKCENVQGNPNL 696 (1082)
Q Consensus 660 ~~l~~L~~l~ls~N~l~~-~~p~~---~~~~~~~~~~Np~~ 696 (1082)
..+++|+.+|+|.|+|+- .+|.. ..++..++.||+|+
T Consensus 449 ~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 449 AQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred hhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 999999999999999984 33432 45678899999986
No 330
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=5e-32 Score=304.82 Aligned_cols=268 Identities=23% Similarity=0.306 Sum_probs=208.1
Q ss_pred CccccceecccCceEEEEEE-EcCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccC------CeEE
Q 045553 802 GFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------AEMF 873 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~ 873 (1082)
.|...+.||+|+||.||+|+ ..+|+.||||.+.... ....+...+|++++++++|+|||+++++-++. ....
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 35566889999999999997 6679999999997643 34456778999999999999999999976654 4679
Q ss_pred EEEeecCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc--CCC--cEEEeeccc
Q 045553 874 LIYNYLPGGNLEKFIQDRP-RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD--NNL--NAYLSDFGL 948 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~--~~~--~~kl~DfGl 948 (1082)
+|||||.+|||+.+++... ...+++.+.+.++.+++.||.|||++ +|+||||||.||++- ++| ..||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 9999999999999998743 56799999999999999999999999 999999999999983 334 479999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
|+....+. ....++||..|.+||++.. +.|+..+|.|||||++||+.||..||-+...+ ....+.++..+.+.
T Consensus 171 Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p----k~~~~~~~~~~tkk 244 (732)
T KOG4250|consen 171 ARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP----KNNKEIMWHIITKK 244 (732)
T ss_pred cccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc----cccchhhhhhhccC
Confidence 99876544 5567899999999999994 88999999999999999999999999865433 12222222222222
Q ss_pred C--CccccccccCCC--------C----ChHHHHHHHHHHHHcccCCCCCCC--CHHHHHHHHhhhC
Q 045553 1028 R--PCEFFTAGLWDC--------G----PHDDLIEMLNLAIMCTGESLSSRP--SMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1028 ~--~~~~~d~~l~~~--------~----~~~~~~~l~~li~~cl~~~p~~RP--t~~ev~~~L~~i~ 1078 (1082)
. .....++...++ . .......+.+....++..+|.+|- .+.+....+..|.
T Consensus 245 p~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL 311 (732)
T KOG4250|consen 245 PSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDIL 311 (732)
T ss_pred CCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHH
Confidence 1 111122222111 1 134456677888888999999998 7777666666553
No 331
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=3.9e-31 Score=299.91 Aligned_cols=260 Identities=19% Similarity=0.272 Sum_probs=194.8
Q ss_pred ceeccc--CceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSG--GFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G--~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
..||+| +||+||+|+. .+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++||||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 346666 9999999965 478999999987543 23356788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc--
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA-- 959 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~-- 959 (1082)
+++.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 9999999876556789999999999999999999999 99999999999999999999999998654332111110
Q ss_pred ----ccCcccCCCcccchhccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHH------------
Q 045553 960 ----TTDVAGTFGYVAPEYAMT--CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWAS------------ 1021 (1082)
Q Consensus 960 ----~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~------------ 1021 (1082)
.....++..|+|||++.+ ..++.++||||+||++|||++|+.||...... ........
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT----QMLLQKLKGPPYSPLDITTF 236 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH----HHHHHHhcCCCCCCcccccc
Confidence 111234567999999976 34789999999999999999999999643211 00000000
Q ss_pred --------------------HHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1022 --------------------MLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1022 --------------------~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.....+......+..+....+......+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred chhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0000000001111112222233456789999999999999999999999754
No 332
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=4.4e-31 Score=295.11 Aligned_cols=261 Identities=23% Similarity=0.325 Sum_probs=195.9
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccC-CCceeeEeeeeccCCe-----
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAE----- 871 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~----- 871 (1082)
++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++++ |||++++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36889999999999999999754 689999998865432 23456888999999995 6999999998877655
Q ss_pred EEEEEeecCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-CCcEEEeecc
Q 045553 872 MFLIYNYLPGGNLEKFIQDRP---RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-NLNAYLSDFG 947 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfG 947 (1082)
.++||||+++ +|.+++.... ...+++..+..++.||+.||+|||+. +|+||||+|+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999975 8988887543 24689999999999999999999999 9999999999999998 8899999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
.+..+..... ......+++.|+|||++.+ ..++.++||||||+++|||++|..||.... ............
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~-------~~~~~~~~~~~~ 228 (295)
T cd07837 157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDS-------ELQQLLHIFKLL 228 (295)
T ss_pred cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC-------HHHHHHHHHHHh
Confidence 9986543222 1122356888999998865 457899999999999999999999986321 111111111100
Q ss_pred CCCcc-cc----ccc-------cCC----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1027 GRPCE-FF----TAG-------LWD----CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1027 ~~~~~-~~----d~~-------l~~----~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+.... .. +.. ... ........++.+++.+|++++|++||++.|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000 00 000 000 0001245678999999999999999999999753
No 333
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=5.9e-31 Score=287.03 Aligned_cols=247 Identities=28% Similarity=0.462 Sum_probs=204.9
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|++.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++|+|++++++++.+....++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788899999999999999654 578999999976644 4567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++... ..+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999999999864 5789999999999999999999999 9999999999999999999999999999877544332
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||...+..++.++|||++|+++|+|++|+.||.... ..... .... .....
T Consensus 156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~-------~~~~~-~~~~-~~~~~-------- 217 (254)
T cd06627 156 -DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN-------PMAAL-FRIV-QDDHP-------- 217 (254)
T ss_pred -ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc-------HHHHH-HHHh-ccCCC--------
Confidence 233568899999999988888999999999999999999999986321 11111 1111 11111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
..+...+..+..++.+|++.+|++||++.+++.
T Consensus 218 -~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 -PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 112234568899999999999999999999975
No 334
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3e-32 Score=289.56 Aligned_cols=243 Identities=25% Similarity=0.324 Sum_probs=204.0
Q ss_pred cCccccceecccCceEEEEEE-EcCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
+.|+.-++||+||||.||-.. ..+|+.+|.|++...+. ....-...|-.++.+++.+.||.+--+|++.+..++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 457788999999999999884 45699999998855432 33445678999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
..|.||+|.-++.......+++..+..++.+|+.||++||.. +||+||+||+|||+|+.|+++|+|.|+|..+....
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~ 341 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK 341 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCCC
Confidence 999999999999887778899999999999999999999999 99999999999999999999999999999886554
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.. ...+||.+|||||++.+..|+...|.||+||++|||+.|+.||...... +.| +-+|.+
T Consensus 342 ~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK-------vk~-----------eEvdrr 401 (591)
T KOG0986|consen 342 PI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK-------VKR-----------EEVDRR 401 (591)
T ss_pred cc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh-------hhH-----------HHHHHH
Confidence 43 3458999999999999999999999999999999999999999632111 111 011211
Q ss_pred cC---CCCChHHHHHHHHHHHHcccCCCCCCCC
Q 045553 1037 LW---DCGPHDDLIEMLNLAIMCTGESLSSRPS 1066 (1082)
Q Consensus 1037 l~---~~~~~~~~~~l~~li~~cl~~~p~~RPt 1066 (1082)
+. ..+++..++++..+....++.||++|--
T Consensus 402 ~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 402 TLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred HhcchhhcccccCHHHHHHHHHHHccCHHHhcc
Confidence 11 1355666788999999999999999863
No 335
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=2.7e-31 Score=295.08 Aligned_cols=261 Identities=21% Similarity=0.333 Sum_probs=199.0
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
+|++.+.||+|++|.||+|+.. +|..||||++..... ...+.+.+|++++++++|||++++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4888999999999999999764 589999999876533 23466788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 880 PGGNLEKFIQDRP-RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 880 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+ ++|.+++.... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||++........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 7 58988887643 34689999999999999999999999 999999999999999999999999999976543221
Q ss_pred cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH-----------HHhc
Q 045553 959 ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM-----------LLLQ 1026 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~ 1026 (1082)
......++..|++||++.+ ..++.++||||+|+++|||++|+.||...... ......... ....
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE----DQLLKIFRIMGTPTESTWPGISQL 231 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHHHhCCCChhhHHHHhcC
Confidence 1223457889999998865 45788999999999999999999998643211 111111000 0000
Q ss_pred CCC----ccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1027 GRP----CEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1027 ~~~----~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
... ....+... .......+..+.+++.+|++.+|++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 232 PEYKPTFPRYPPQDL-QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred chhcccccCCChHHH-HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 00000000 0011123467889999999999999999999975
No 336
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=5e-31 Score=297.52 Aligned_cols=256 Identities=19% Similarity=0.265 Sum_probs=194.8
Q ss_pred ccceecccCceEEEEEEEcCCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 805 VQNCIGSGGFGATYKAEIIPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
+.+.+|.|+++.||+++. +++.||||++... .....+.+.+|++.+++++|+||+++++++.+.+..+++|||++++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 444455566666666544 6899999998754 3345678999999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC-----
Q 045553 883 NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET----- 957 (1082)
Q Consensus 883 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~----- 957 (1082)
+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+........
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 999999876556789999999999999999999999 999999999999999999999999999875532211
Q ss_pred -ccccCcccCCCcccchhccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 958 -HATTDVAGTFGYVAPEYAMT--CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 958 -~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||...... ...... .. +.....++
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~-------~~~~~~-~~-~~~~~~~~ 232 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT-------QMLLEK-VR-GTVPCLLD 232 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHH-Hh-ccCccccc
Confidence 11223457788999999876 35788999999999999999999999742111 111111 10 00000000
Q ss_pred --------------------ccc----CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 --------------------AGL----WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 --------------------~~l----~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
... ..........++.+++.+||+.+|++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 233 KSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000 001122345678999999999999999999999864
No 337
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=4.9e-31 Score=292.81 Aligned_cols=260 Identities=25% Similarity=0.362 Sum_probs=200.7
Q ss_pred ccccceecccCceEEEEEEEc-CCeEEEEEEeecCccc--cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 803 FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQ--GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
|++.+.||+|++|.||+|... +++.+|+|++...... ....+.+|++++++++|+|++++++++.++...++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999654 6899999998754332 4567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
+ +++.+++... ...+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||.+....... ..
T Consensus 81 ~-~~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~ 154 (283)
T cd05118 81 D-TDLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RP 154 (283)
T ss_pred C-CCHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-cc
Confidence 6 5888888765 25789999999999999999999999 99999999999999999999999999998775443 12
Q ss_pred ccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC---ccccc-
Q 045553 960 TTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP---CEFFT- 1034 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d- 1034 (1082)
.....++..|+|||...+. .++.++||||+|+++|+|++|+.||..... ................ .+..+
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE-----IDQLFKIFRTLGTPDPEVWPKFTSL 229 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHcCCCchHhcccchhh
Confidence 2334578899999998876 789999999999999999999999863211 1111111111000000 00000
Q ss_pred ----------cccC--CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 ----------AGLW--DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ----------~~l~--~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.... .........++.+++.+|++.+|.+||++.|++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0000 00112346789999999999999999999999863
No 338
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=4.5e-31 Score=297.01 Aligned_cols=261 Identities=26% Similarity=0.342 Sum_probs=198.5
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccc--cHHHHHHHHHHHhccCCCceeeEeeeeccC--CeEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQ--GVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEMF 873 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 873 (1082)
...+|++.+.||+|+||.||+|... +|+.||+|++...... ....+.+|++++++++|+|++++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 3467999999999999999999654 5899999998754322 233466899999999999999999998754 5689
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+. ++|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+....
T Consensus 85 lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 85 LVMEYCE-QDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEEecCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 9999995 5898888764 35689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc-CCCcc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ-GRPCE 1031 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 1031 (1082)
.... ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.... ..+........ +....
T Consensus 160 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~--------~~~~~~~~~~~~~~~~~ 230 (309)
T cd07845 160 LPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS--------EIEQLDLIIQLLGTPNE 230 (309)
T ss_pred CccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHhcCCCCh
Confidence 4322 2222345788999999875 557899999999999999999999986321 11222211110 00000
Q ss_pred cccc-----------ccCCC-C------ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 FFTA-----------GLWDC-G------PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~d~-----------~l~~~-~------~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..-+ .+... . .......+.+++.+|++.||++||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 231 SIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 00000 0 01125667899999999999999999999864
No 339
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=5e-31 Score=289.20 Aligned_cols=242 Identities=24% Similarity=0.320 Sum_probs=198.3
Q ss_pred ecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 809 IGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 809 lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
||.|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999765 489999999865432 3456789999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcc
Q 045553 885 EKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVA 964 (1082)
Q Consensus 885 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 964 (1082)
.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+....... ......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~ 153 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFC 153 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccccc
Confidence 9999864 3589999999999999999999998 99999999999999999999999999998765432 223346
Q ss_pred cCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChH
Q 045553 965 GTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHD 1044 (1082)
Q Consensus 965 gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1044 (1082)
|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||..... +............. ....+..
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~---------~~~~~~~ 218 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE------DPMEIYNDILKGNG---------KLEFPNY 218 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC------CHHHHHHHHhccCC---------CCCCCcc
Confidence 88999999999888899999999999999999999999974321 12233333221111 1122333
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 045553 1045 DLIEMLNLAIMCTGESLSSRPS-----MRQVAQ 1072 (1082)
Q Consensus 1045 ~~~~l~~li~~cl~~~p~~RPt-----~~ev~~ 1072 (1082)
...++.+++.+||+.+|++||+ ++|+++
T Consensus 219 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 219 IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 3568999999999999999999 666665
No 340
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=8.1e-32 Score=299.56 Aligned_cols=248 Identities=24% Similarity=0.381 Sum_probs=207.0
Q ss_pred hcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
...|.+.+.||+|.|+.|.+|+ ..++..||+|.+....- ...+.+.+|+++|..++|||||+++.+...+...|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 4679999999999999999995 45699999999976543 33455889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+.+|.+.+|+..+. ...+..+..++.|+.+|++|+|++ .|||||||++|++++.+.++||+|||++..+. .
T Consensus 135 eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--~ 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD--Y 207 (596)
T ss_pred EeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec--c
Confidence 9999999999999863 455588889999999999999999 99999999999999999999999999999886 3
Q ss_pred CccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.....+.+|++.|.|||++.+.+| ++++|+||+|+++|-|+.|..||+... +...-. +++--
T Consensus 208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~--------lk~Lr~---------rvl~g 270 (596)
T KOG0586|consen 208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN--------LKELRP---------RVLRG 270 (596)
T ss_pred cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc--------cccccc---------hheee
Confidence 345567899999999999998775 578999999999999999999998422 111111 11111
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.++ .|.-...+..+++++++-.+|.+|++++++...
T Consensus 271 k~r--Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 271 KYR--IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred eec--ccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 111 122335578899999999999999999998754
No 341
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=2.3e-31 Score=294.37 Aligned_cols=242 Identities=25% Similarity=0.333 Sum_probs=188.6
Q ss_pred eecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHH---hccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 808 CIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTL---GRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 808 ~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
.||+|+||.||+|.. .+++.||+|.+..... .....+.+|..++ ...+||+++.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999965 4589999998865422 1122334444333 34479999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++|||++........
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~--- 152 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--- 152 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc---
Confidence 99999998764 4689999999999999999999999 999999999999999999999999999976543222
Q ss_pred cCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 961 TDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....|+..|+|||...+ ..++.++||||+||++|||++|..||...... .... ....... ...
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~-~~~~~~~----------~~~ 216 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----DKHE-IDRMTLT----------VNV 216 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc-----CHHH-HHHHhhc----------CCc
Confidence 23468999999999864 56889999999999999999999999743211 1111 1111100 001
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
..+...+.++.+++.+|++.+|++|| +++|++++
T Consensus 217 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 217 ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 12334456889999999999999999 69999875
No 342
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=4.3e-31 Score=294.06 Aligned_cols=255 Identities=23% Similarity=0.298 Sum_probs=202.8
Q ss_pred CccccceecccCceEEEEEEE----cCCeEEEEEEeecCc----cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeE
Q 045553 802 GFNVQNCIGSGGFGATYKAEI----IPGVVVAVKRLSVGR----FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 872 (1082)
+|++.+.||+|+||.||+|.. .+++.||||.++... ....+.+.+|+++++++ +|||++++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999864 357889999986432 22345688999999999 599999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999998763 4688999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCccccCcccCCCcccchhcccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCR--VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
............|+..|+|||...+.. .+.++||||||+++|||++|+.||..... ........+......
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~--- 228 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE----QNSQSEISRRILKSK--- 228 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc----cchHHHHHHHHHccC---
Confidence 544333333456899999999987755 78899999999999999999999863211 111122222221111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
...+......+.+++.+|++.+|++|||+.++.+.|+.
T Consensus 229 --------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 229 --------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred --------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 01122334578899999999999999999888777654
No 343
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=8.3e-31 Score=291.64 Aligned_cols=257 Identities=24% Similarity=0.322 Sum_probs=196.7
Q ss_pred ccccceecccCceEEEEEEEc-CCeEEEEEEeecCccc--cHHHHHHHHHHHhcc---CCCceeeEeeeeccCCe-----
Q 045553 803 FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQ--GVQQFAAEIRTLGRV---QHPNLVTLIGYHVSEAE----- 871 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~----- 871 (1082)
|++.+.||+|+||.||+|+.. +++.||+|++...... ....+.+|+++++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 677889999999999999876 4899999999754322 234466677766655 69999999999987776
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.+++|||+. ++|.+++.......+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 999999996 5899998876555799999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC--
Q 045553 952 LGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP-- 1029 (1082)
Q Consensus 952 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1029 (1082)
+..... .....++..|+|||++.+..++.++||||||+++|||++|+.||.... ..+........-..
T Consensus 157 ~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 226 (287)
T cd07838 157 YSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS--------EADQLDKIFDVIGLPS 226 (287)
T ss_pred ccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC--------hHHHHHHHHHHcCCCC
Confidence 643322 123357889999999999899999999999999999999998886321 11222222111000
Q ss_pred -cc----------ccccccCC---CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1030 -CE----------FFTAGLWD---CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1030 -~~----------~~d~~l~~---~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. .+...... .........+.+++.+|++.||++||++.|++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 227 EEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00 00000000 0012335678899999999999999999999753
No 344
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=3.4e-31 Score=290.89 Aligned_cols=245 Identities=24% Similarity=0.386 Sum_probs=198.1
Q ss_pred ecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 809 IGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 809 lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
||+|+||.||+|+.. +|+.||+|.+..... ...+.+.+|++++++++|||++++++.+......++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999776 489999999865433 3456788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC-------
Q 045553 885 EKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET------- 957 (1082)
Q Consensus 885 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~------- 957 (1082)
.++++.. ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENV--GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 9999874 3689999999999999999999999 999999999999999999999999999876543321
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
.......++..|+|||.......+.++||||||+++||+++|+.||.... .......... +... .
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~~-~----- 220 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET--------PEEIFQNILN-GKIE-W----- 220 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHhc-CCcC-C-----
Confidence 12233567889999999988889999999999999999999999986321 2222222221 1111 0
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
......+..+..++.+|++.+|++||++.++.+.|+
T Consensus 221 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 221 --PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred --CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 000112568899999999999999999966665554
No 345
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=6.7e-31 Score=291.59 Aligned_cols=258 Identities=24% Similarity=0.300 Sum_probs=194.5
Q ss_pred ccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc-ccHHHHHHHHHHHhccC-CCceeeEeeeeccC--CeEEEEEe
Q 045553 803 FNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSE--AEMFLIYN 877 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lV~E 877 (1082)
|++.+.||+|+||.||+|.. .+++.||+|+++.... .......+|+..++++. |+|++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 66788999999999999964 4689999999875422 22234457888888885 99999999999887 88999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|++ +++.+++... ...+++..+..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.++.......
T Consensus 81 ~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 81 LMD-MNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred cCC-ccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 996 6888888764 34689999999999999999999999 9999999999999999 9999999999987643322
Q ss_pred ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-----------
Q 045553 958 HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL----------- 1025 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 1025 (1082)
. ....++..|+|||++.+ ..++.++||||+||++|||++|+.||.... ......+......
T Consensus 155 ~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 155 Y--TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN-----ELDQIAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred c--CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC-----HHHHHHHHHHHcCCCCHHHHHhhc
Confidence 1 23457889999997654 567889999999999999999999996422 1111222211110
Q ss_pred cCCCccccccccCC----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1026 QGRPCEFFTAGLWD----CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 ~~~~~~~~d~~l~~----~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.........+.... ......+..+.+++.+|++.+|++||++.+++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00000000000000 0012346789999999999999999999999864
No 346
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=5.6e-31 Score=293.17 Aligned_cols=245 Identities=22% Similarity=0.342 Sum_probs=198.5
Q ss_pred cceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 806 QNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
..+||+|+||.||+|.. .++..||||++..........+.+|+.+++.++|+|++++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 36799999999999965 46899999998765555567789999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcc
Q 045553 885 EKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVA 964 (1082)
Q Consensus 885 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 964 (1082)
.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+........ ......
T Consensus 105 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~~~~~~ 177 (292)
T cd06657 105 TDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSLV 177 (292)
T ss_pred HHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc-cccccc
Confidence 998864 3579999999999999999999999 999999999999999999999999999876543221 223356
Q ss_pred cCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChH
Q 045553 965 GTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHD 1044 (1082)
Q Consensus 965 gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1044 (1082)
|+..|+|||+..+..++.++||||+|+++|||++|+.||.... ........ ...... .+. ....
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~--------~~~~~~~~-~~~~~~-----~~~--~~~~ 241 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--------PLKAMKMI-RDNLPP-----KLK--NLHK 241 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHH-HhhCCc-----ccC--Cccc
Confidence 8899999999988889999999999999999999999986321 11111111 111110 000 0112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1045 DLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1045 ~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+.+++.+|++.+|.+||++.+++++
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 34568899999999999999999999873
No 347
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=6e-31 Score=295.13 Aligned_cols=265 Identities=26% Similarity=0.344 Sum_probs=200.5
Q ss_pred HHhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCC----
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA---- 870 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 870 (1082)
...++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34578999999999999999999765 588999999875432 33456788999999999999999999887654
Q ss_pred ------eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEe
Q 045553 871 ------EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLS 944 (1082)
Q Consensus 871 ------~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 944 (1082)
..++|+||+++ ++..++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeC
Confidence 78999999965 777777654 44689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHH
Q 045553 945 DFGLARLLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASML 1023 (1082)
Q Consensus 945 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1023 (1082)
|||.+...............++..|+|||.+.+ ..++.++||||+||++|||++|+.||.... .......+...
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~-----~~~~~~~~~~~ 233 (302)
T cd07864 159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ-----ELAQLELISRL 233 (302)
T ss_pred cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHH
Confidence 999998765433322233356788999998865 457889999999999999999999986321 11111111111
Q ss_pred HhcCCCc---ccc--------cc------ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1024 LLQGRPC---EFF--------TA------GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1024 ~~~~~~~---~~~--------d~------~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....... ++. +. ..+. .....+..+.+++.+|++.+|++||++.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLRE-EFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhh-hcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111000 000 00 0000 011235678999999999999999999999753
No 348
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=4.4e-31 Score=300.62 Aligned_cols=267 Identities=24% Similarity=0.328 Sum_probs=199.5
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccC-----CeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE-----AEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 872 (1082)
+++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999964 468999999986432 23456678899999999999999999876543 357
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||++ +++.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeec
Confidence 99999995 588888764 4689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc--cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 953 GTSETH--ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 953 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
...... ......|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||.... .......+.........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~-----~~~~~~~~~~~~~~~~~ 231 (336)
T cd07849 157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKD-----YLHQLNLILGVLGTPSQ 231 (336)
T ss_pred cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHcCCCCH
Confidence 432221 2233568999999998754 568899999999999999999999986321 01111111111111000
Q ss_pred c---cccccc-------cC--CCC-----ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhhhC
Q 045553 1030 C---EFFTAG-------LW--DCG-----PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ--LKQIQ 1078 (1082)
Q Consensus 1030 ~---~~~d~~-------l~--~~~-----~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~--L~~i~ 1078 (1082)
. ...+.. .. ... ......++.+++.+|++.+|++||++.|++++ ++...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 0 000000 00 000 01224568899999999999999999999886 54443
No 349
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=7.3e-31 Score=292.55 Aligned_cols=251 Identities=23% Similarity=0.333 Sum_probs=200.4
Q ss_pred CccccceecccCceEEEEEEE----cCCeEEEEEEeecCcc----ccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeE
Q 045553 802 GFNVQNCIGSGGFGATYKAEI----IPGVVVAVKRLSVGRF----QGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 872 (1082)
+|++.+.||+|+||.||+|+. .+|..||+|++..... ...+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 478889999999999999965 3689999999875322 2346678899999999 589999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999999864 4688999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCccccCcccCCCcccchhcccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTC--RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
............|+..|+|||...+. .++.++||||||+++|+|++|+.||.... .......+.........
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~----~~~~~~~~~~~~~~~~~-- 229 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG----EKNSQAEISRRILKSEP-- 229 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC----ccccHHHHHHHhhccCC--
Confidence 54333333345688999999998753 46789999999999999999999986321 11222333322222111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQ 1072 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~ 1072 (1082)
..+......+.+++.+|++.+|++|| +..++..
T Consensus 230 ---------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 230 ---------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ---------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 12233456789999999999999997 6666655
No 350
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=1.2e-30 Score=286.58 Aligned_cols=250 Identities=22% Similarity=0.327 Sum_probs=199.4
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecC-----ccccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG-----RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEM 872 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 872 (1082)
.+|++.+.||+|+||.||+|.. .++..||+|.+... .......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688999999999999999964 46899999987532 123446788999999999999999999988654 468
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++++|.+++... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 8999999999999999764 3578999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCC--ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 953 GTSET--HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 953 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||.... . ..-+......+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~-~~~~~~~~~~~~~- 227 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE-------A-MAAIFKIATQPTK- 227 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC-------H-HHHHHHHHcCCCC-
Confidence 32111 11223568899999999998889999999999999999999999986321 1 1111122111111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...+......+.+++.+|++ +|.+||+..++..+
T Consensus 228 --------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 228 --------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred --------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 11234455789999999999 57999999988753
No 351
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=1.2e-31 Score=316.22 Aligned_cols=254 Identities=27% Similarity=0.401 Sum_probs=194.0
Q ss_pred HHhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeecc-------
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS------- 868 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 868 (1082)
+-..+|+..+.||+||||.||+++.+ ||+.||||++.... ......+.+|+..+++++|||||+++..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34567888899999999999999644 79999999997653 3345668899999999999999998742110
Q ss_pred --------------------------------------------------------------------------------
Q 045553 869 -------------------------------------------------------------------------------- 868 (1082)
Q Consensus 869 -------------------------------------------------------------------------------- 868 (1082)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 045553 869 ------------------------E--------AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLH 916 (1082)
Q Consensus 869 ------------------------~--------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH 916 (1082)
+ ...||=||||+..++.++++.+.... .....++++++|++|++|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHH
Confidence 0 01578899999888888887653211 46788999999999999999
Q ss_pred hCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC------C-----------CCCccccCcccCCCcccchhcccC-
Q 045553 917 DECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG------T-----------SETHATTDVAGTFGYVAPEYAMTC- 978 (1082)
Q Consensus 917 ~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~------~-----------~~~~~~~~~~gt~~y~aPE~~~~~- 978 (1082)
+. +||||||||.||++|++..|||+|||+|.... . ......+..+||.-|+|||++.+.
T Consensus 715 ~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 99 99999999999999999999999999998721 0 011134567899999999999764
Q ss_pred --CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHc
Q 045553 979 --RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMC 1056 (1082)
Q Consensus 979 --~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~c 1056 (1082)
.|+.|+||||+|+|++||+. ||.. .+.-...+.. ++.+..+.- +. ........-.++|+++
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~T-------sMERa~iL~~-LR~g~iP~~--~~----f~~~~~~~e~slI~~L 854 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGT-------SMERASILTN-LRKGSIPEP--AD----FFDPEHPEEASLIRWL 854 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCc-------hHHHHHHHHh-cccCCCCCC--cc----cccccchHHHHHHHHH
Confidence 49999999999999999985 4542 3333333332 334444332 11 1223445667899999
Q ss_pred ccCCCCCCCCHHHHHH
Q 045553 1057 TGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1057 l~~~p~~RPt~~ev~~ 1072 (1082)
++.||.+|||+.|++.
T Consensus 855 l~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 855 LSHDPSKRPTATELLN 870 (1351)
T ss_pred hcCCCccCCCHHHHhh
Confidence 9999999999999875
No 352
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=9.2e-31 Score=292.54 Aligned_cols=254 Identities=26% Similarity=0.413 Sum_probs=197.5
Q ss_pred hcCccccceecccCceEEEEEEEcC-CeEEEEEEeecCcc-ccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP-GVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.++|++.+.||+|+||.||+|...+ ++.||||.+..... ....++.+|+..+.+.. ||||+++++++.+....++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3568889999999999999998764 89999999975432 33455677777666665 999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+ ++++.++.... ...+++..+..++.|++.|++|||+.. +|+||||+|+||++++++.+||+|||++..+....
T Consensus 94 e~~-~~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 94 ELM-STCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred ecc-CcCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 998 45787777654 347899999999999999999999732 89999999999999999999999999997654322
Q ss_pred CccccCcccCCCcccchhcccCC----CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCR----VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
. .....++..|+|||++.+.. ++.++||||||+++|||++|+.||.... ...+......... ....
T Consensus 170 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~-~~~~ 239 (296)
T cd06618 170 A--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK-------TEFEVLTKILQEE-PPSL 239 (296)
T ss_pred c--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch-------hHHHHHHHHhcCC-CCCC
Confidence 2 22335788999999987654 7889999999999999999999986321 1122222222221 1111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
- .......++.+++.+|++.+|++||++.+++++-
T Consensus 240 ~-------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 240 P-------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred C-------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 0 1112356789999999999999999999998653
No 353
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=4e-31 Score=300.92 Aligned_cols=267 Identities=22% Similarity=0.315 Sum_probs=202.1
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccC-----Ce
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE-----AE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 871 (1082)
..+|++.+.||+|+||+||+|.. .+++.||||.+... .......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45799999999999999999964 46899999998643 233455677899999999999999999987654 35
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.++||||+. ++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 799999995 7899988763 4689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc----
Q 045553 952 LGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ---- 1026 (1082)
Q Consensus 952 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 1026 (1082)
..... .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... .............
T Consensus 158 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~ 231 (337)
T cd07858 158 TSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY-----VHQLKLITELLGSPSEE 231 (337)
T ss_pred cCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh-----HHHHHHHHHHhCCCChH
Confidence 64332 22233467889999998865 4688999999999999999999999864211 0000000000000
Q ss_pred -------CCCcccc-------ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhhhCC
Q 045553 1027 -------GRPCEFF-------TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ--LKQIQP 1079 (1082)
Q Consensus 1027 -------~~~~~~~-------d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~--L~~i~~ 1079 (1082)
+...+.+ +.... ......+.++.+++.+|++.+|++||++.|++++ ++.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 232 DLGFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred HhhhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 0000000 00000 0112345678999999999999999999999987 665543
No 354
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=1.3e-30 Score=293.62 Aligned_cols=263 Identities=22% Similarity=0.297 Sum_probs=195.5
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCC------
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA------ 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 870 (1082)
.++|++.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457999999999999999999654 689999999865432 22345678999999999999999999886543
Q ss_pred --eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 871 --EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 871 --~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
..++||||+. +++.+++... ...+++.++..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCC
Confidence 4599999995 5888888754 34689999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCc---cccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 949 ARLLGTSETH---ATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 949 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
+..+...... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||..... ......+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~-----~~~~~~~~~~~ 240 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE-----QHQLTLISQLC 240 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHh
Confidence 9866433221 12234578899999988664 468899999999999999999999864321 11111111111
Q ss_pred hcCCCccc---------ccc-ccCCCC---------ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1025 LQGRPCEF---------FTA-GLWDCG---------PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1025 ~~~~~~~~---------~d~-~l~~~~---------~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.....+. .+. ...... +......+.+++.+|++.+|++||++.|++++
T Consensus 241 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 241 -GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred -CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 0000000 000 000000 01123467799999999999999999999863
No 355
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=1.2e-30 Score=285.73 Aligned_cols=243 Identities=23% Similarity=0.278 Sum_probs=189.2
Q ss_pred ceecccCceEEEEEEE-cCCeEEEEEEeecCccc---cHHHHHHHHHH-HhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQ---GVQQFAAEIRT-LGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|.. .+++.||+|.+...... ....+..|... ....+|+|++++++++...+..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5689999999999965 45899999998654321 12234445444 4455899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
++|.++++.. ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++..... ..
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~ 151 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NK 151 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----cc
Confidence 9999999764 4688999999999999999999999 999999999999999999999999999876432 22
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...|+..|+|||...+..++.++||||+|+++|||++|..||.... .......... +... ... ..
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~~--~~~----~~ 216 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET--------PDAVFDNILS-RRIN--WPE----EV 216 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHh-cccC--CCC----cc
Confidence 3458889999999988889999999999999999999999996321 1222222211 1110 000 11
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
....+..+.+++.+|++.+|++||++.++.+.|
T Consensus 217 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 217 KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred cccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 123456899999999999999999775554433
No 356
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=5.3e-31 Score=299.69 Aligned_cols=262 Identities=21% Similarity=0.304 Sum_probs=199.1
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeecc----CCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS----EAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 872 (1082)
..+|++.+.||+|+||.||+|.. .+|..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 46799999999999999999964 468999999987542 2345677889999999999999999988753 3468
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+. ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999995 6999998763 4589999999999999999999999 9999999999999999999999999999766
Q ss_pred CCCCCc---cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 953 GTSETH---ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 953 ~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
...... ......|+..|+|||++.+ ..++.++||||||+++|||++|+.||...... .....+.... +..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~-----~~~~~~~~~~-g~~ 231 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV-----HQLKLILSVL-GSP 231 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH-----HHHHHHHHHh-CCC
Confidence 432221 1234568899999999865 56889999999999999999999999643110 0111111100 000
Q ss_pred Cccc------------cccc-cCCCC-----ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCEF------------FTAG-LWDCG-----PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~~------------~d~~-l~~~~-----~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+. .+.. ..... ....+.++.+++.+|++.+|++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 232 SEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000 0000 00000 12235789999999999999999999999874
No 357
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-31 Score=270.48 Aligned_cols=264 Identities=23% Similarity=0.332 Sum_probs=207.9
Q ss_pred HHHHHHHhcCccccceecccCceEEEEE-EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccC-CCceeeEeeeeccCC
Q 045553 793 YENVVRATAGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEA 870 (1082)
Q Consensus 793 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 870 (1082)
++++.+.+. +.||+|+|+.|-.+ .+.+|..+|||++.+.......++.+|++++.+.+ |+||+.++++|+++.
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 456655554 68999999999988 57789999999998776667788899999998885 999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC---cEEEeecc
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL---NAYLSDFG 947 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DfG 947 (1082)
..|+|||.|.||+|..+++.+ ..+++.++.++..+|+.||.|||.+ +|.|||+||+|||-.... .+|||||.
T Consensus 150 ~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred eEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccc
Confidence 999999999999999999984 5799999999999999999999999 999999999999996543 58999999
Q ss_pred cceecCCCC------CccccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCC---ccCCCCC
Q 045553 948 LARLLGTSE------THATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPS---FCSFGNG 1013 (1082)
Q Consensus 948 la~~~~~~~------~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~---~~~~~~~ 1013 (1082)
+..-+.... +....+.+|+..|||||+.. ...|+.++|.||+|||+|-|++|..||... .+.++.+
T Consensus 225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrG 304 (463)
T KOG0607|consen 225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRG 304 (463)
T ss_pred cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCC
Confidence 876442211 12233567999999999873 346889999999999999999999999764 2333333
Q ss_pred ccH---HHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1014 FNI---VAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1014 ~~~---~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
+.= .+..-..+++|.+. +-|.. ....+.+..+++...+..++..|-++.+++.
T Consensus 305 e~Cr~CQ~~LFesIQEGkYe-FPdkd-----WahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 305 EVCRVCQNKLFESIQEGKYE-FPDKD-----WAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccHHHHHHHHHHHhccCCc-CChhh-----hHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 221 11222233444322 21111 1345678889999999999999999888876
No 358
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=7.6e-31 Score=290.74 Aligned_cols=248 Identities=23% Similarity=0.366 Sum_probs=203.9
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV 875 (1082)
++|.+.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36889999999999999999654 68999999986532 233467889999999998 99999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 9999999999999874 3699999999999999999999999 9999999999999999999999999999866433
Q ss_pred CC-------------------ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccH
Q 045553 956 ET-------------------HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNI 1016 (1082)
Q Consensus 956 ~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~ 1016 (1082)
.. .......++..|+|||...+..++.++||||+|++++++++|+.||.... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~ 227 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN--------E 227 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc--------H
Confidence 21 12233467889999999998889999999999999999999999987431 1
Q ss_pred HHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCH----HHHHH
Q 045553 1017 VAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSM----RQVAQ 1072 (1082)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~----~ev~~ 1072 (1082)
........... ...+...+..+.+++.+|++.+|++||++ .++++
T Consensus 228 ~~~~~~~~~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 228 YLTFQKILKLE-----------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHHHHhcC-----------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11112211111 11233345689999999999999999999 77664
No 359
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=9.4e-31 Score=297.44 Aligned_cols=265 Identities=23% Similarity=0.349 Sum_probs=206.2
Q ss_pred CccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCC-----eEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA-----EMF 873 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 873 (1082)
+|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+++++.++|+||+++.+++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999765 48999999987543 344567899999999999999999999988765 789
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||++ ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+....
T Consensus 81 lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999996 5899998764 3799999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCC--ccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC--
Q 045553 954 TSET--HATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR-- 1028 (1082)
Q Consensus 954 ~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1028 (1082)
.... .......++..|+|||++.+. .++.++||||+|+++|+|++|+.||.... ..+..........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~~~~~ 226 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD--------YIDQLNLIVEVLGTP 226 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC--------HHHHHHHHHHhcCCC
Confidence 4431 123345678899999999887 78999999999999999999999996432 1111111111000
Q ss_pred C------------cccccc-ccC-----CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhhhCCC
Q 045553 1029 P------------CEFFTA-GLW-----DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ--LKQIQPP 1080 (1082)
Q Consensus 1029 ~------------~~~~d~-~l~-----~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~--L~~i~~~ 1080 (1082)
. .+.+.. ... .......+..+.+++.+|++.+|++||++.+++++ +++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 227 SEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred ChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 0 000000 000 00011235678999999999999999999999985 5555443
No 360
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=1e-30 Score=297.74 Aligned_cols=263 Identities=25% Similarity=0.338 Sum_probs=198.3
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecC--ccccHHHHHHHHHHHhcc-CCCceeeEeeeeccC--CeE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSE--AEM 872 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~ 872 (1082)
..++|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567999999999999999999754 5889999988542 223345677899999999 999999999988653 468
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||++ ++|..++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999996 6999988753 688999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCC----ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH---
Q 045553 953 GTSET----HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL--- 1024 (1082)
Q Consensus 953 ~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 1024 (1082)
..... .......|+..|+|||++.+ ..++.++||||||+++|||++|+.||...... ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~ 232 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL-----NQLEKIIEVIGPP 232 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCC
Confidence 43322 12334568999999998765 55788999999999999999999998632110 0000000000
Q ss_pred --------hcCCCccccccccCC------CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1025 --------LQGRPCEFFTAGLWD------CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1025 --------~~~~~~~~~d~~l~~------~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
........++..... ......+.++.+++.+|++.+|++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000011100000 0001245678999999999999999999999875
No 361
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1.7e-30 Score=291.92 Aligned_cols=248 Identities=25% Similarity=0.369 Sum_probs=197.7
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
..|+..+.||+|+||.||+|... ++..||+|.+.... ....+++.+|+++++.++|+|++++.+++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34777889999999999999754 57889999986432 233456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+. |++.+++... ...+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 95 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred EccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 9995 6888877654 34589999999999999999999999 9999999999999999999999999998765432
Q ss_pred CccccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 957 THATTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
....|+..|+|||.+. ...++.++|||||||++|||++|+.||.... -........ .+.....
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~- 234 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIA-QNESPAL- 234 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc--------HHHHHHHHh-hcCCCCc-
Confidence 2345788999999975 3567889999999999999999999985321 111111111 1111111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
.+......+.+++.+||+.+|++||++.+++++-.
T Consensus 235 -------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 235 -------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred -------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 11234567899999999999999999999987644
No 362
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=1.2e-30 Score=289.68 Aligned_cols=265 Identities=25% Similarity=0.359 Sum_probs=199.0
Q ss_pred ccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEEEeec
Q 045553 803 FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
|++.+.||+|++|+||+|... +++.||+|++..... .......+|+..+++++ |+|++++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 677889999999999999765 478999999865432 22334567899999999 999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
+|+|.+++.......+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-- 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC--
Confidence 88999999876545789999999999999999999999 999999999999999999999999999986643322
Q ss_pred ccCcccCCCcccchhcc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCC--------CCccHHHHHHHHHhcCCCc
Q 045553 960 TTDVAGTFGYVAPEYAM-TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFG--------NGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 1030 (1082)
.....++..|+|||++. +..++.++||||||++++||++|+.||........ ....-..|...........
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 22346788999999875 45678999999999999999999999864321000 0000001111111111111
Q ss_pred cccccccC---CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1031 EFFTAGLW---DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1031 ~~~d~~l~---~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+..... .........++.+++.+|++.+|++||++.|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000000 00011224679999999999999999999999864
No 363
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=1.3e-30 Score=297.32 Aligned_cols=260 Identities=21% Similarity=0.320 Sum_probs=196.6
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccC------C
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------A 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 870 (1082)
..+|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|++++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 47899999999999999999965 468999999986532 22345678999999999999999999988654 3
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
.+++|+||+. .++.++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 5799999995 47777653 3589999999999999999999999 99999999999999999999999999987
Q ss_pred ecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc-C-
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ-G- 1027 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~- 1027 (1082)
..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||.... ...-+...... +
T Consensus 166 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~--------~~~~~~~~~~~~~~ 233 (342)
T cd07879 166 HADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--------YLDQLTQILKVTGV 233 (342)
T ss_pred CCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHhcCC
Confidence 64321 223467889999999876 468899999999999999999999997421 11111111110 0
Q ss_pred CCccc------------cc--ccc-CCCC---ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhhhCC
Q 045553 1028 RPCEF------------FT--AGL-WDCG---PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ--LKQIQP 1079 (1082)
Q Consensus 1028 ~~~~~------------~d--~~l-~~~~---~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~--L~~i~~ 1079 (1082)
...+. ++ +.. .... .......+.+++.+|++.+|++||++.|++.+ +++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 234 PGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred CCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 00000 00 000 0000 01234568899999999999999999999865 655543
No 364
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=3.4e-30 Score=290.07 Aligned_cols=244 Identities=26% Similarity=0.372 Sum_probs=195.0
Q ss_pred ccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 803 FNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
|...+.||+|+||+||+|+. .+++.||+|++..... ...+.+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55667899999999999965 4689999999865432 2345688899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+. +++.+++... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 103 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 95 6888887654 34689999999999999999999999 999999999999999999999999999864321
Q ss_pred cccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 959 ATTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.....|+..|+|||++. ...++.++|||||||++|||++|..||.... ............ .....
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~--------~~~~~~~~~~~~-~~~~~-- 241 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQND-SPTLQ-- 241 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHhcC-CCCCC--
Confidence 22346889999999984 4568889999999999999999999986321 112222222211 11111
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......+.+++.+|++.+|.+||++.+++.+
T Consensus 242 ------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 ------SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11233568899999999999999999999864
No 365
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=2e-30 Score=284.12 Aligned_cols=249 Identities=23% Similarity=0.350 Sum_probs=197.2
Q ss_pred CccccceecccCceEEEEEEEcC-CeEEEEEEeecC-----ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIP-GVVVAVKRLSVG-----RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
+|.+.+.||+|+||.||+|+... +..+++|..+.. ......++..|+.++++++|||++++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 58889999999999999996543 444555555421 122344577899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 876 YNYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
|||+++++|.++++.. ....+++..+..++.|++.|+.|||+. +++|+||+|+||+++. +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999998752 245789999999999999999999999 9999999999999975 569999999998764
Q ss_pred CCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
.... ......|+..|+|||...+..++.++||||||+++|+|++|..||... .......... .+....
T Consensus 157 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~--------~~~~~~~~~~-~~~~~~-- 224 (260)
T cd08222 157 GSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ--------NFLSVVLRIV-EGPTPS-- 224 (260)
T ss_pred CCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc--------cHHHHHHHHH-cCCCCC--
Confidence 3222 223346788999999998888899999999999999999999998632 1222222222 121111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+...+.++.+++.+|++.+|++||++.|++++
T Consensus 225 -------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 225 -------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred -------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 123455688999999999999999999999863
No 366
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1e-31 Score=314.31 Aligned_cols=258 Identities=22% Similarity=0.284 Sum_probs=211.5
Q ss_pred HHHHHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecC---ccccHHHHHHHHHHHhccCCCceeeEeeeeccCC
Q 045553 795 NVVRATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG---RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 795 ~~~~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 870 (1082)
++....++|.+.++||+|+||.|..++. .+++.||+|++... .......|.+|-++|..-+.+=|+.++-+|.+..
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 3334456799999999999999999965 46899999999762 3345667899999999989999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
+.|+|||||+||+|-.++.... .+++..++.++..|+-||.-+|+. |+|||||||+|||+|..|++|++|||.+.
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHH
Confidence 9999999999999999999874 799999999999999999999999 99999999999999999999999999999
Q ss_pred ecCCCCCccccCcccCCCcccchhccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMT-----CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
.+..+........+|||.|.+||+++. +.|+..+|.||+||++|||+.|..||+. ..++.....++.
T Consensus 224 km~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa--------dslveTY~KIm~ 295 (1317)
T KOG0612|consen 224 KMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA--------DSLVETYGKIMN 295 (1317)
T ss_pred hcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH--------HHHHHHHHHHhc
Confidence 887766666677899999999999862 5789999999999999999999999984 344444444443
Q ss_pred cCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 045553 1026 QGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS---MRQVAQQ 1073 (1082)
Q Consensus 1026 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt---~~ev~~~ 1073 (1082)
..+...+.| ....++++..||++.+. +|+.|-. +.++..+
T Consensus 296 hk~~l~FP~-------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 296 HKESLSFPD-------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred hhhhcCCCc-------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 322222211 12345678888888774 5566655 7766543
No 367
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=1.7e-30 Score=287.35 Aligned_cols=242 Identities=24% Similarity=0.325 Sum_probs=188.3
Q ss_pred eecccCceEEEEEEE-cCCeEEEEEEeecCccc---cHHHHHHHH---HHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 808 CIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQ---GVQQFAAEI---RTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 808 ~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~---~~~~~~~e~---~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
.||+|+||.||+|.. .+++.||+|.+...... ....+..|. +.++...||+++++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999964 45899999998654221 112233343 34455679999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+++|.+++... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|||++..+.... .
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~ 152 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---P 152 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---C
Confidence 99999998753 4689999999999999999999999 99999999999999999999999999987653322 2
Q ss_pred cCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 961 TDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....|+..|+|||++.++ .++.++||||+|+++|||++|+.||...... ..... ....... ..
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~-----~~~~~-~~~~~~~------~~---- 216 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----DKHEI-DRMTLTM------AV---- 216 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc-----chHHH-HHHhhcc------CC----
Confidence 234689999999998754 6889999999999999999999999743211 11111 1111100 01
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
..+...+.++.+++.+|+..+|.+|| ++.|++++
T Consensus 217 ~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 217 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 12223356899999999999999999 99999864
No 368
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=270.92 Aligned_cols=254 Identities=22% Similarity=0.261 Sum_probs=202.7
Q ss_pred HhcCcccc-ceecccCceEEEEE-EEcCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeecc----CCe
Q 045553 799 ATAGFNVQ-NCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVS----EAE 871 (1082)
Q Consensus 799 ~~~~~~~~-~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~ 871 (1082)
.+++|.+. ++||-|-.|.|-.. ...+++++|+|++... ....+|++..-.. .|||||.++++|.. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45566664 57999999999988 4557999999998643 3346777765444 69999999998864 356
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc---CCCcEEEeeccc
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD---NNLNAYLSDFGL 948 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~DfGl 948 (1082)
..+|||.|+||.|.+.+++++...+++.++..|+.||+.|+.|||+. .|.||||||+|+|.. .+..+|++|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccc
Confidence 78999999999999999999888999999999999999999999999 999999999999996 456799999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
|+.... .....+.+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||+... +..+..-++..++.+.
T Consensus 211 AK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~h-----g~aispgMk~rI~~gq 283 (400)
T KOG0604|consen 211 AKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH-----GLAISPGMKRRIRTGQ 283 (400)
T ss_pred ccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccC-----CccCChhHHhHhhccC
Confidence 987543 334556678999999999999999999999999999999999999997432 2223333444444443
Q ss_pred CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+. +-+ +.....++..+++|+..+..+|++|-|+.|++.+
T Consensus 284 y~-FP~-----pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 284 YE-FPE-----PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred cc-CCC-----hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 22 100 0112446778999999999999999999998754
No 369
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=1.8e-31 Score=270.68 Aligned_cols=271 Identities=23% Similarity=0.325 Sum_probs=200.4
Q ss_pred HhcCccccceecccCceEEEEEEEcC-----CeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeecc-CC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIP-----GVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVS-EA 870 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~-----~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 870 (1082)
-...|+....||+|+||.||+|.-.+ .+.+|+|+++.... .-.....+|+..++.++|||++.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 34568899999999999999994322 23789999976532 223556899999999999999999998877 78
Q ss_pred eEEEEEeecCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC----CcEEE
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRP---RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN----LNAYL 943 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl 943 (1082)
..++++||.+ -+|.+.++.++ .+.++...+..|+.||+.|+.|||++ -|+|||+||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 8999999996 48999887643 45789999999999999999999999 79999999999999877 89999
Q ss_pred eecccceecCCCCCc--cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCC--ccHHH
Q 045553 944 SDFGLARLLGTSETH--ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNG--FNIVA 1018 (1082)
Q Consensus 944 ~DfGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~--~~~~~ 1018 (1082)
+|||+++.+...-.. ....++-|..|+|||.+.+ ..||.+.||||.||++.||+|-++-|.....+.... ....+
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 999999988654322 3345678999999999987 568999999999999999999888776543222221 11112
Q ss_pred HHHHHHhcCCCc--cccccc-----------cCCCC--C---hH-------HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1019 WASMLLLQGRPC--EFFTAG-----------LWDCG--P---HD-------DLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1019 ~~~~~~~~~~~~--~~~d~~-----------l~~~~--~---~~-------~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.-+....-|.+. ++-|-. ++..+ + .. .......++.+++++||.+|-|..+.+++
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 111111111110 111000 00000 0 00 11237789999999999999999998765
No 370
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.7e-30 Score=292.86 Aligned_cols=260 Identities=25% Similarity=0.359 Sum_probs=194.4
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccc--cHHHHHHHHHHHhccCCCceeeEeeeeccC-------
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQ--GVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------- 869 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 869 (1082)
.++|++.++||+|+||.||+|... +++.||+|++...... ....+.+|++++++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999754 5899999998654322 234567899999999999999999977543
Q ss_pred -CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 870 -AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 870 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
...++||||+. +++...+... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.++|+|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCcc
Confidence 34699999995 5787777654 45799999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCc----------cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHH
Q 045553 949 ARLLGTSETH----------ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIV 1017 (1082)
Q Consensus 949 a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~ 1017 (1082)
++........ ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~--------~ 233 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD--------I 233 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH--------H
Confidence 9865432211 1123457888999998765 4578999999999999999999999863211 1
Q ss_pred HHHHHHHhc-CC-----------CccccccccCCCCC-------hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1018 AWASMLLLQ-GR-----------PCEFFTAGLWDCGP-------HDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1018 ~~~~~~~~~-~~-----------~~~~~d~~l~~~~~-------~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
......... +. .....+.......+ ......+.+++.+|++.+|++|||+.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 234 DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 111111100 00 00000000000011 112356889999999999999999999875
No 371
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-31 Score=264.83 Aligned_cols=250 Identities=26% Similarity=0.424 Sum_probs=198.4
Q ss_pred ccccceecccCceEEEEEEEc-CCeEEEEEEeecC-ccccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEEEeec
Q 045553 803 FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG-RFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++...||.|+-|.||+++.. +|..+|||.+... ..++.+++...++++..-. .|.||+.+|||..+...++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 344566999999999999654 5899999999654 4566778888888876654 899999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
..-++.+++.. ..++++.-+-++...+..||.||.+++ +|+|||+||+|||+|+.|++|+||||.+.++-....+
T Consensus 174 -s~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh- 248 (391)
T KOG0983|consen 174 -STCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH- 248 (391)
T ss_pred -HHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccccc-
Confidence 44566666554 557888888899999999999999886 9999999999999999999999999999877544433
Q ss_pred ccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 960 TTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
+..+|-+.|||||.+. ...|+-++||||||+.++|+.||+-||...... .+.+..+.. ..++ .
T Consensus 249 -trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-------Fe~ltkvln-~ePP-~---- 314 (391)
T KOG0983|consen 249 -TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-------FEVLTKVLN-EEPP-L---- 314 (391)
T ss_pred -ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-------HHHHHHHHh-cCCC-C----
Confidence 3447889999999985 346889999999999999999999999754322 122223322 2221 1
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+. +....+..+.+++..|+..|+.+||...+++++
T Consensus 315 L~--~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 315 LP--GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CC--cccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 11 112246689999999999999999999988764
No 372
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-30 Score=313.43 Aligned_cols=257 Identities=25% Similarity=0.395 Sum_probs=208.9
Q ss_pred cCccccceecccCceEEEEEEEc--------CCeEEEEEEeecCcc-ccHHHHHHHHHHHhcc-CCCceeeEeeeeccCC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII--------PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 870 (1082)
++..+.+.+|+|.||.||+|... ....||||..+.... .+.+.+..|+++++.+ +|+|++.++|+|...+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34456679999999999999533 146799999875433 4567899999999999 5999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhCC------------C--CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRP------------R--RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD 936 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 936 (1082)
..++|+||++.|+|.++++..+ . ..++......++.|||.|++||++. +++|||+..+|||+.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEec
Confidence 9999999999999999999764 0 2388899999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCCccccCcc--cCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCC
Q 045553 937 NNLNAYLSDFGLARLLGTSETHATTDVA--GTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNG 1013 (1082)
Q Consensus 937 ~~~~~kl~DfGla~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~ 1013 (1082)
++..+||+|||+|+............-. -...|||||.+....++.++|||||||++||+++ |..|+....
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~------ 526 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP------ 526 (609)
T ss_pred CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC------
Confidence 9999999999999976554444322222 2456999999999999999999999999999998 555654211
Q ss_pred ccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1014 FNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
...... ..+.+|... ..|..+..++.++|+.||+.+|++||++.|+++.++..
T Consensus 527 -~~~~l~-~~l~~G~r~---------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 527 -PTEELL-EFLKEGNRM---------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred -cHHHHH-HHHhcCCCC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 012222 244444322 34667788999999999999999999999999999874
No 373
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=3.4e-30 Score=294.11 Aligned_cols=263 Identities=22% Similarity=0.337 Sum_probs=200.1
Q ss_pred cHHHHHHHhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeecc
Q 045553 792 TYENVVRATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS 868 (1082)
Q Consensus 792 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 868 (1082)
...++..+.++|.+.+.||+|+||.||+|. ..+++.||+|++.... ....+.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 455667788999999999999999999995 4568999999986532 2234567889999999999999999998754
Q ss_pred C------CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEE
Q 045553 869 E------AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAY 942 (1082)
Q Consensus 869 ~------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 942 (1082)
. ...++++|++ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEE
Confidence 3 3468888887 7899988864 3589999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHH
Q 045553 943 LSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWAS 1021 (1082)
Q Consensus 943 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~ 1021 (1082)
|+|||+++.... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||..... .....
T Consensus 161 l~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~--------~~~~~ 228 (345)
T cd07877 161 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--------IDQLK 228 (345)
T ss_pred Eecccccccccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHH
Confidence 999999876432 2233467889999999876 5688899999999999999999999853211 01111
Q ss_pred HHHh-cCCC-cccc---------------ccccC---CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1022 MLLL-QGRP-CEFF---------------TAGLW---DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1022 ~~~~-~~~~-~~~~---------------d~~l~---~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.... .+.. .+.. +.... .........++.+++.+|++.+|++||++.+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 229 LILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 1000 0000 0000 00000 00001234578899999999999999999998764
No 374
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=3.3e-30 Score=291.78 Aligned_cols=266 Identities=23% Similarity=0.333 Sum_probs=199.5
Q ss_pred HHHHhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeecc-CCe
Q 045553 796 VVRATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS-EAE 871 (1082)
Q Consensus 796 ~~~~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 871 (1082)
+..++++|++.+.||+|+||.||+|. ..+++.||+|++... .....+.+.+|++++++++|||++++.+++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 34567899999999999999999996 447899999988543 22335678899999999999999999998865 567
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.++||||+ +++|.++++. ..+++..+..++.|+++||+|||+. +|+||||+|+||++++++.++|+|||.+..
T Consensus 85 ~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 89999999 6799988874 3578888999999999999999999 999999999999999999999999999875
Q ss_pred cCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCC-------CCccHHHHHHHH
Q 045553 952 LGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFG-------NGFNIVAWASML 1023 (1082)
Q Consensus 952 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~-------~~~~~~~~~~~~ 1023 (1082)
.... .....++..|+|||++.+ ..++.++||||||+++|||++|+.||........ .+....+|....
T Consensus 158 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 158 QDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred cCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 4322 223457889999998766 5689999999999999999999999863211000 000001111111
Q ss_pred HhcCCCccccc-cccCCCCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1024 LLQGRPCEFFT-AGLWDCGP-----HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1024 ~~~~~~~~~~d-~~l~~~~~-----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.... ..+.+. .......+ ......+.+++.+|++.+|++||++.|++.+
T Consensus 234 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 234 CSEN-TLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cchh-hHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 000000 00001111 1234689999999999999999999999875
No 375
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=5.5e-30 Score=292.09 Aligned_cols=255 Identities=20% Similarity=0.329 Sum_probs=196.1
Q ss_pred HhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCC-----
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA----- 870 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 870 (1082)
..++|++.+.||+|+||.||+|. ..++..||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 56789999999999999999995 4568999999986432 223456789999999999999999999887543
Q ss_pred -eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 871 -EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 871 -~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
.+++||||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++++|||++
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 469999999 7899988864 3689999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-cC
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL-QG 1027 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~ 1027 (1082)
...... .....++..|+|||++.+ ..++.++||||+|+++|++++|+.||..... ......... .+
T Consensus 166 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~--------~~~~~~~~~~~~ 233 (343)
T cd07880 166 RQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH--------LDQLMEIMKVTG 233 (343)
T ss_pred cccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHhcC
Confidence 865332 223467889999999876 4588999999999999999999999863211 111111110 00
Q ss_pred CCccccccc---------------cCC----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1028 RPCEFFTAG---------------LWD----CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1028 ~~~~~~d~~---------------l~~----~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.....+... ... .........+.+++.+|++.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000 000 001123456889999999999999999999984
No 376
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=3.2e-30 Score=294.10 Aligned_cols=258 Identities=19% Similarity=0.273 Sum_probs=195.1
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccC---------
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--------- 869 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------- 869 (1082)
..+|.+.+.||+|+||.||+|.. .+|..||+|++........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 46799999999999999999965 46899999999776666677889999999999999999999876543
Q ss_pred -----CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-CCcEEE
Q 045553 870 -----AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-NLNAYL 943 (1082)
Q Consensus 870 -----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl 943 (1082)
...++||||++ ++|.+++.. ..+++..+..++.|++.|+.|||+. +|+||||||+||+++. ++.+|+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEE
Confidence 35799999996 689888864 3588999999999999999999999 9999999999999984 567899
Q ss_pred eecccceecCCCCCc--cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHH
Q 045553 944 SDFGLARLLGTSETH--ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWA 1020 (1082)
Q Consensus 944 ~DfGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~ 1020 (1082)
+|||.++........ ......++..|+|||.+.. ..++.++|||||||++|||++|+.||..... ..-.
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~--------~~~~ 228 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHE--------LEQM 228 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHH
Confidence 999999866432221 1122357889999998754 5678899999999999999999999964321 0101
Q ss_pred HHHHhcCCC--------------ccccccccCCCC-----ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1021 SMLLLQGRP--------------CEFFTAGLWDCG-----PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1021 ~~~~~~~~~--------------~~~~d~~l~~~~-----~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
......... ............ ......++.+++.+|++.+|++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 229 QLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 111000000 000000000000 0123467889999999999999999999984
No 377
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=4.1e-30 Score=292.68 Aligned_cols=263 Identities=21% Similarity=0.271 Sum_probs=196.5
Q ss_pred hcCcc-ccceecccCceEEEEEEE-cCCeEEEEEEeecCcccc--------------HHHHHHHHHHHhccCCCceeeEe
Q 045553 800 TAGFN-VQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQG--------------VQQFAAEIRTLGRVQHPNLVTLI 863 (1082)
Q Consensus 800 ~~~~~-~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~l~ 863 (1082)
.++|. +.+.||+|+||+||+|.. .+++.||||++....... ...+.+|++++++++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 34565 457799999999999964 468999999986542211 12467899999999999999999
Q ss_pred eeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEE
Q 045553 864 GYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYL 943 (1082)
Q Consensus 864 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 943 (1082)
+++..++..++||||+. ++|.+++.. ...+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.+++
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence 99999999999999995 699999875 34689999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCC-------------CccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccC
Q 045553 944 SDFGLARLLGTSE-------------THATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCS 1009 (1082)
Q Consensus 944 ~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~ 1009 (1082)
+|||.+....... ........++..|+|||++.+. .++.++||||+|+++|||++|+.||.....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~- 239 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE- 239 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-
Confidence 9999998765211 1112223467889999998764 468999999999999999999999864321
Q ss_pred CCCCccHHHHHHHHHhcCCCc---cccccc----cCC-------CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1010 FGNGFNIVAWASMLLLQGRPC---EFFTAG----LWD-------CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1010 ~~~~~~~~~~~~~~~~~~~~~---~~~d~~----l~~-------~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
......+.......... ...+.. ... ........++.+++.+|++.+|++||++.|++.+
T Consensus 240 ----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 240 ----IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred ----HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 11111111111111000 000000 000 0011234678899999999999999999999864
No 378
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=3.8e-30 Score=285.54 Aligned_cols=260 Identities=26% Similarity=0.378 Sum_probs=199.3
Q ss_pred ccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 803 FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
|++.+.||+|++|.||+|+.. +++.||+|++.... ....+.+..|++++++++|+|++++++++.+....++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999755 48999999997653 333467788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
+ ++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~ 154 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-T 154 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-c
Confidence 6 69999998752 4689999999999999999999999 999999999999999999999999999987643322 2
Q ss_pred ccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc------c-
Q 045553 960 TTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC------E- 1031 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~- 1031 (1082)
.....++..|+|||.+.+. .++.++||||||+++||+++|+.||..... ......+.......... .
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE-----IDQLFKIFQILGTPTEESWPGVTKL 229 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHHHhCCCcHHHHHhhccc
Confidence 2233467789999998776 789999999999999999999998863211 11111111110000000 0
Q ss_pred -ccccccCC-------CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 -FFTAGLWD-------CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 -~~d~~l~~-------~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+..... .........+.+++.+|++.+|++||++.+|+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 230 PDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000000 0001225679999999999999999999999863
No 379
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-31 Score=281.78 Aligned_cols=257 Identities=23% Similarity=0.380 Sum_probs=201.5
Q ss_pred hcCccccceecccCceEEEEE-EEcCCeEEEEEEeecCcc--c-----cHHHHHHHHHHHhccCCCceeeEeeeecc-CC
Q 045553 800 TAGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRF--Q-----GVQQFAAEIRTLGRVQHPNLVTLIGYHVS-EA 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~--~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 870 (1082)
.++|-..++||+|||+.||+| .+...+.||||+-..... + -.+...+|+++.+.+.||.||++++|+.- .+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 456888899999999999999 666789999998754321 1 12446789999999999999999999974 56
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc---CCCcEEEeecc
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD---NNLNAYLSDFG 947 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~DfG 947 (1082)
.+|-|+||++|.+|+-|++.+ +.+++.+++.|+.||+.||.||... .++|||-||||.|||+- ..|.+||+|||
T Consensus 542 sFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred cceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 789999999999999999884 5789999999999999999999986 67999999999999994 45789999999
Q ss_pred cceecCCCCCc------cccCcccCCCcccchhcccC----CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHH
Q 045553 948 LARLLGTSETH------ATTDVAGTFGYVAPEYAMTC----RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIV 1017 (1082)
Q Consensus 948 la~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~ 1017 (1082)
+++++..+... .+....||+.|++||.+.-+ +++.|.||||.||++|+++.|+.||...... .
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ----Q--- 691 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ----Q--- 691 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH----H---
Confidence 99998654332 34457899999999988533 5788999999999999999999999743211 1
Q ss_pred HHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1018 AWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1018 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.++.+..+...-+..+ +.-+....+...+|++|+++--++|....++..
T Consensus 692 ----dILqeNTIlkAtEVqF--P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 692 ----DILQENTILKATEVQF--PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred ----HHHhhhchhcceeccC--CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 1222222222111111 011233467889999999999999998887753
No 380
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=2.8e-30 Score=294.63 Aligned_cols=256 Identities=22% Similarity=0.325 Sum_probs=197.8
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCe----
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE---- 871 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 871 (1082)
..++|++.+.||+|++|.||+|... ++..||||++.... ....+.+.+|+.++++++|||++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4678999999999999999999764 57899999986532 2334567789999999999999999998776554
Q ss_pred --EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 872 --MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 872 --~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
.++|+||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||+|+||+++.++.++|+|||.+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999999 6799999875 3689999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc-C
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ-G 1027 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 1027 (1082)
...... .....++..|+|||...+ ..++.++||||+|+++|||++|+.||..... .......... +
T Consensus 166 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~--------~~~~~~i~~~~~ 233 (343)
T cd07851 166 RHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH--------IDQLKRIMNLVG 233 (343)
T ss_pred cccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHhcC
Confidence 865432 233467889999999865 4678899999999999999999999863211 1111111110 0
Q ss_pred CCc-cc------------cccc-cC--CC---CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1028 RPC-EF------------FTAG-LW--DC---GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1028 ~~~-~~------------~d~~-l~--~~---~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
... +. +... .. .. .....+.++.+++.+|++.+|++|||+.||+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 234 TPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000 00 0000 00 00 001235679999999999999999999999763
No 381
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=1.5e-29 Score=310.42 Aligned_cols=145 Identities=31% Similarity=0.469 Sum_probs=131.1
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|.+.++||+|+||.||+|... +++.||||++..... .....+.+|+++++.++||||+++++++......|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57999999999999999999765 689999999875432 23467889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
||+++++|.++++.. ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999764 4588999999999999999999999 99999999999999999999999999986
No 382
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.2e-29 Score=276.02 Aligned_cols=236 Identities=27% Similarity=0.360 Sum_probs=194.7
Q ss_pred ecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 809 IGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 809 lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
||+|+||.||+|... +++.||+|.+..... .....+..|++++++++|||++++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999765 589999999875433 2456788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcc
Q 045553 885 EKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVA 964 (1082)
Q Consensus 885 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 964 (1082)
.+++... ..+++..+..++.|++.|+.|+|+. +++|+||+|+||+++.++.++|+|||.+....... .......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~ 154 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFC 154 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCc
Confidence 9999864 3689999999999999999999998 99999999999999999999999999998764332 1223456
Q ss_pred cCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChH
Q 045553 965 GTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHD 1044 (1082)
Q Consensus 965 gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1044 (1082)
++..|+|||...+...+.++|+||||+++||+++|+.||.... ..+....... +.. ..+..
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~----------~~~~~ 215 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED--------RKEIYEKILK-DPL----------RFPEF 215 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHhc-CCC----------CCCCC
Confidence 8889999999998889999999999999999999999986321 1222222222 110 12223
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHH
Q 045553 1045 DLIEMLNLAIMCTGESLSSRPSMRQ 1069 (1082)
Q Consensus 1045 ~~~~l~~li~~cl~~~p~~RPt~~e 1069 (1082)
.+..+.+++.+|+..+|++||++.+
T Consensus 216 ~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 216 LSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCHHHHHHHHHHhcCCHhhCCCccc
Confidence 3568899999999999999999954
No 383
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=1.5e-29 Score=287.48 Aligned_cols=260 Identities=20% Similarity=0.303 Sum_probs=192.1
Q ss_pred CccccceecccCceEEEEEEEc-C--CeEEEEEEeecC--ccccHHHHHHHHHHHhcc-CCCceeeEeeeecc----CCe
Q 045553 802 GFNVQNCIGSGGFGATYKAEII-P--GVVVAVKRLSVG--RFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVS----EAE 871 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~-~--~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~ 871 (1082)
+|++.+.||+|+||.||+|... . +..||+|++... .....+.+.+|+++++++ +||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4788899999999999999754 3 678999998643 222346678899999999 59999999986542 245
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.++++||+. ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 788899984 799999875 35689999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCc---cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh--
Q 045553 952 LGTSETH---ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL-- 1025 (1082)
Q Consensus 952 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 1025 (1082)
....... ......|+..|+|||+..+ ..++.++||||+||++|+|++|+.||..... ......+.....
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~ 229 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY-----VDQLNQILQVLGTP 229 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH-----HHHHHHHHHHhCCC
Confidence 6432221 1233568999999998765 5688999999999999999999999864210 000000000000
Q ss_pred ---------cCCCccc---cccc--c-CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1026 ---------QGRPCEF---FTAG--L-WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1026 ---------~~~~~~~---~d~~--l-~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
....... +... . ...........+.+++.+|++.+|++||++.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 230 DEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred CHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000 0000 0 00001123467899999999999999999999864
No 384
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-30 Score=272.04 Aligned_cols=240 Identities=23% Similarity=0.322 Sum_probs=195.9
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 875 (1082)
.+|.+..+||+|+||.|-+|+.+ +.+.+|||+++.... .+.+--..|-+++.-. +-|.++.+..+++.-++.|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46899999999999999999544 568899999876532 2233334566666655 467899999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+.||+|-..++.. ..+.+..+..+|.+||-||-+||++ +|++||||..|||+|.+|.+||+|||+++.-- -
T Consensus 429 MEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni-~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI-F 502 (683)
T ss_pred EEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc-c
Confidence 9999999999888874 4678888999999999999999999 99999999999999999999999999997532 2
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
....+.+++||+.|+|||.+..++|+...|.|||||++|||+.|+.||+... -.+....+...
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD--------E~elF~aI~eh--------- 565 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--------EDELFQAIMEH--------- 565 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHHc---------
Confidence 2234556899999999999999999999999999999999999999998532 12222222221
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCC
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRP 1065 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RP 1065 (1082)
.+ .+|...+.+...+....+...|.+|-
T Consensus 566 nv--syPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 566 NV--SYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred cC--cCcccccHHHHHHHHHHhhcCCcccc
Confidence 11 36667778889999999999999985
No 385
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=9.2e-31 Score=281.46 Aligned_cols=243 Identities=25% Similarity=0.394 Sum_probs=195.9
Q ss_pred cceecccCceEEEEEE-EcCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 806 QNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
.++||.|.||+||-|+ .++|+.||||++.+.+. ....++.+|+.+++++.||.||.+-..|+..+..++|||.+ .|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 4789999999999995 45799999999976543 44577899999999999999999999999999999999999 45
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC---CcEEEeecccceecCCCCCcc
Q 045553 883 NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN---LNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 883 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfGla~~~~~~~~~~ 959 (1082)
+..+++-.....++++.....+..||+.||.|||.+ +|+|+|+||+|||+... -++||||||+|+++++...
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF-- 722 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF-- 722 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhhh--
Confidence 665655555567899888889999999999999999 99999999999999644 2699999999999875443
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
...++||+.|+|||+++++.|...-||||.||++|--++|..||.++ +++.+-+..+ .-++-+.-+
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd-------EdIndQIQNA------aFMyPp~PW- 788 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED-------EDINDQIQNA------AFMYPPNPW- 788 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc-------cchhHHhhcc------ccccCCCch-
Confidence 34578999999999999999999999999999999999999999743 2222222211 112222222
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVA 1071 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~ 1071 (1082)
.+......++|...++..=.+|-+....+
T Consensus 789 ---~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 789 ---SEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred ---hhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 34556777888888888777887776543
No 386
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-30 Score=272.07 Aligned_cols=259 Identities=20% Similarity=0.323 Sum_probs=203.0
Q ss_pred hcCccccceecccCceEEEEE-EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCC--C----ceeeEeeeeccCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQH--P----NLVTLIGYHVSEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~----niv~l~~~~~~~~~~ 872 (1082)
+++|.+...+|+|+||.|-.. ....+..||||+++.-.. -.+...-|+++++++.+ | -+|.+.+++...++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 789999999999999999998 344589999999875432 23445679999999943 2 377888899999999
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC---------------
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN--------------- 937 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--------------- 937 (1082)
|+|+|.+ |-|+.+++..+...+++...+..|+.|++++++|||+. +++|.||||+||++.+
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999 77999999998888999999999999999999999999 9999999999999941
Q ss_pred -----CCcEEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCC
Q 045553 938 -----NLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGN 1012 (1082)
Q Consensus 938 -----~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~ 1012 (1082)
+..++|+|||.|+.-.... ...+.|..|+|||++.+-.++.++||||+|||++|+++|..-|.... +
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe----n 314 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE----N 314 (415)
T ss_pred eccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC----c
Confidence 3458999999998743322 45678999999999999999999999999999999999998886422 1
Q ss_pred CccHHHHHHHHHhcCCCccccccc------------------------cC-CCC--------ChHHHHHHHHHHHHcccC
Q 045553 1013 GFNIVAWASMLLLQGRPCEFFTAG------------------------LW-DCG--------PHDDLIEMLNLAIMCTGE 1059 (1082)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~d~~------------------------l~-~~~--------~~~~~~~l~~li~~cl~~ 1059 (1082)
.+.+ ..++.++. .-+..++... +. .+. ...+..++.+|+.+|+..
T Consensus 315 ~EHL-aMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 315 LEHL-AMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred HHHH-HHHHHhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence 1211 22222222 1111111111 00 011 134567799999999999
Q ss_pred CCCCCCCHHHHHHH
Q 045553 1060 SLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1060 ~p~~RPt~~ev~~~ 1073 (1082)
||.+|+|+.|++.+
T Consensus 393 DP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 393 DPARRITLREALSH 406 (415)
T ss_pred CccccccHHHHhcC
Confidence 99999999999864
No 387
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=3.6e-31 Score=263.27 Aligned_cols=250 Identities=26% Similarity=0.377 Sum_probs=195.9
Q ss_pred cceecccCceEEEEEE-EcCCeEEEEEEeecCcc-ccHHHHHHHHHHH-hccCCCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 806 QNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF-QGVQQFAAEIRTL-GRVQHPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
...||.|+||+|+|-. .+.|+..|||++..... .+.+++..|.+.. +.-+.||||+++|++..++..|+-||.| ..
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DI 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hh
Confidence 3459999999999984 45699999999987654 5667888888764 4457899999999999999999999999 56
Q ss_pred CHHHHHh---hCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 883 NLEKFIQ---DRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 883 sL~~~l~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
|++.+-. .-....+++.-.-+|....+.||.||-... .|||||+||+|||++..|.+|+||||.+..+... ..
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S--iA 223 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS--IA 223 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH--HH
Confidence 7765543 333567899999999999999999999875 8999999999999999999999999999766332 22
Q ss_pred ccCcccCCCcccchhccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 960 TTDVAGTFGYVAPEYAMT--CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
.+.-+|-..|||||.+.. ..|+-++||||+|+.+||+.||+.|+.... +..+-+..++.+. .+...-+
T Consensus 224 kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-------svfeql~~Vv~gd-pp~l~~~-- 293 (361)
T KOG1006|consen 224 KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-------SVFEQLCQVVIGD-PPILLFD-- 293 (361)
T ss_pred hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-------HHHHHHHHHHcCC-CCeecCc--
Confidence 333467889999999853 458999999999999999999999987432 2333344443333 2222111
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
....+....+..++..|+-.|-.+||.+.++.+
T Consensus 294 --~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 294 --KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred --ccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 111345678999999999999999999988765
No 388
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=2.6e-29 Score=270.94 Aligned_cols=220 Identities=24% Similarity=0.225 Sum_probs=177.5
Q ss_pred cCceEEEEEE-EcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCHHHHHhh
Q 045553 812 GGFGATYKAE-IIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQD 890 (1082)
Q Consensus 812 G~~g~Vy~a~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 890 (1082)
|.+|.||+|. ..+++.||+|++.... .+.+|...+....|||++++++++......++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 8899999995 4568999999987543 234455555566799999999999999999999999999999999876
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcccCCCcc
Q 045553 891 RPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYV 970 (1082)
Q Consensus 891 ~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~ 970 (1082)
. ..+++..+..++.|+++|++|+|+. +|+||||||+||+++.++.++++|||.+...... .....++..|+
T Consensus 79 ~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~ 149 (237)
T cd05576 79 F--LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYC 149 (237)
T ss_pred h--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCcccc
Confidence 4 3589999999999999999999999 9999999999999999999999999988665432 12234577899
Q ss_pred cchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHH
Q 045553 971 APEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEML 1050 (1082)
Q Consensus 971 aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 1050 (1082)
|||...+..++.++||||+|+++|||++|+.|++..... .... .....+......+.
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~--------------~~~~---------~~~~~~~~~~~~~~ 206 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG--------------INTH---------TTLNIPEWVSEEAR 206 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh--------------cccc---------cccCCcccCCHHHH
Confidence 999998888999999999999999999999887532110 0000 00012233456789
Q ss_pred HHHHHcccCCCCCCCCHH
Q 045553 1051 NLAIMCTGESLSSRPSMR 1068 (1082)
Q Consensus 1051 ~li~~cl~~~p~~RPt~~ 1068 (1082)
+++.+|++.||++||++.
T Consensus 207 ~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 207 SLLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHHccCCHHHhcCCC
Confidence 999999999999999973
No 389
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-29 Score=288.22 Aligned_cols=262 Identities=22% Similarity=0.403 Sum_probs=213.4
Q ss_pred ccHHHHHHHhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeecc
Q 045553 791 LTYENVVRATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVS 868 (1082)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 868 (1082)
..++.+...+.-|++.+.||.|.+|.||+++ .++|+.+|+|+..... ...+++..|+++++.. .|||++.++|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 3445555567789999999999999999995 5678999999886543 3456788899999888 59999999998863
Q ss_pred -----CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEE
Q 045553 869 -----EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYL 943 (1082)
Q Consensus 869 -----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 943 (1082)
+++.|||||||.+||.-++++...+..+.|+.+..|++++++|+++||.. .++|||||-.|||++.++.+|+
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEE
Confidence 57899999999999999999988788999999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCccccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHH
Q 045553 944 SDFGLARLLGTSETHATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVA 1018 (1082)
Q Consensus 944 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~ 1018 (1082)
+|||.+....... ....+..||+.|||||++. ...|+.++|+||+|++..||-.|.+|+-...+- .
T Consensus 165 vDFGvSaQldsT~-grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm--------r 235 (953)
T KOG0587|consen 165 VDFGVSAQLDSTV-GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM--------R 235 (953)
T ss_pred eeeeeeeeeeccc-ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh--------h
Confidence 9999998774332 3445578999999999984 345778999999999999999999998643221 1
Q ss_pred HHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1019 WASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1019 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+-.+.+. .+ +.+ .-|....+++.++|..|+..|.++||++.+++++
T Consensus 236 aLF~IpRN-PP-----PkL--krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 236 ALFLIPRN-PP-----PKL--KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred hhccCCCC-CC-----ccc--cchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 11111111 01 111 2356788999999999999999999999988753
No 390
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=284.31 Aligned_cols=241 Identities=26% Similarity=0.322 Sum_probs=192.9
Q ss_pred HhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.++.|.+...+|.|+|+.|-.+. ..+++..+||++.... .+-.+|+.++... +|||++++.+.+.+..+.|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 35668888889999999999884 5568899999997652 2234566555444 7999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE-cCCCcEEEeecccceecCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL-DNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill-~~~~~~kl~DfGla~~~~~~ 955 (1082)
|++.++-+.+.+...+ .+. ..+..|+.+|+.|+.|||++ +|||||+||+|||+ +..++++|+|||.++.....
T Consensus 396 e~l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hhccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 9999988877776542 222 67778999999999999999 99999999999999 68899999999999876544
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
....+-|..|.|||+.....|++++|+||||+++|+|++|+.||..... + .-+...+..+..
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~----~----~ei~~~i~~~~~------ 531 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA----G----IEIHTRIQMPKF------ 531 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc----h----HHHHHhhcCCcc------
Confidence 2233568899999999999999999999999999999999999973211 1 112222222211
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+..+++|+.+|++.||.+||+|.++..+
T Consensus 532 ------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 532 ------SECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred ------ccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 13446789999999999999999999998654
No 391
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=236.15 Aligned_cols=260 Identities=24% Similarity=0.326 Sum_probs=197.1
Q ss_pred CccccceecccCceEEEEEE-EcCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+|+-.++||+|.||+||+|+ +.+++.||+|+...... .......+|+-+++.++|+|||++++..+.+....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 35556789999999999995 55689999999876533 2345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+ ..+|..|.... ...++.+.+..++.|+++|+.|.|++ .+.|||+||.|.+++.+|+.|++|||+++-++.+-..
T Consensus 83 c-dqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvrc 157 (292)
T KOG0662|consen 83 C-DQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC 157 (292)
T ss_pred h-hHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceEe
Confidence 9 66899988876 45688999999999999999999999 9999999999999999999999999999988755432
Q ss_pred cccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc------
Q 045553 959 ATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE------ 1031 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 1031 (1082)
...-+-|..|++|.++.+. -|+...|+||-||++.|+.....|.-+.. ....+..+....-|.+.+
T Consensus 158 -ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~------dvddqlkrif~~lg~p~ed~wps~ 230 (292)
T KOG0662|consen 158 -YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN------DVDDQLKRIFRLLGTPTEDQWPSM 230 (292)
T ss_pred -eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC------cHHHHHHHHHHHhCCCccccCCcc
Confidence 2233468899999999875 47889999999999999998666654321 112222222222222211
Q ss_pred --ccccccCCCCC---------hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 --FFTAGLWDCGP---------HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 --~~d~~l~~~~~---------~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.-|-..-..+| +.....=.++.+..+.-+|..|.++.+.+++
T Consensus 231 t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 231 TKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred ccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 11111111111 1122334567777888899999999887763
No 392
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=8.5e-29 Score=295.80 Aligned_cols=262 Identities=21% Similarity=0.275 Sum_probs=173.3
Q ss_pred HhcCccccceecccCceEEEEEEEc-C----CeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeee------ec
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-P----GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGY------HV 867 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~~ 867 (1082)
..++|++.+.||+|+||.||+|... + +..||||++..... .+.+..| .++...+.++..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4678999999999999999999764 4 68999998764321 1111111 1122222222222221 24
Q ss_pred cCCeEEEEEeecCCCCHHHHHhhCCC------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCC
Q 045553 868 SEAEMFLIYNYLPGGNLEKFIQDRPR------------------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIK 929 (1082)
Q Consensus 868 ~~~~~~lV~E~~~~gsL~~~l~~~~~------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 929 (1082)
...+.++||||+++++|.++++.... .......+..++.|++.||+|||+. +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 56789999999999999999875421 0112344668999999999999999 99999999
Q ss_pred CCCEEEcC-CCcEEEeecccceecCCCCCccccCcccCCCcccchhcccC----------------------CCCchhhH
Q 045553 930 PSNILLDN-NLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTC----------------------RVSDKADV 986 (1082)
Q Consensus 930 ~~Nill~~-~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~Dv 986 (1082)
|+|||++. ++.+||+|||+|+.+............+++.|+|||.+... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999986 57999999999987654444445567889999999965322 23456799
Q ss_pred HHHHHHHHHHHhCCCCCCCCccC-----CCCCccHHHHHHHHHhcCCCccccccccCCC--CChHHHHHHHHHHHHcccC
Q 045553 987 YSFGVVLLELISDKKALDPSFCS-----FGNGFNIVAWASMLLLQGRPCEFFTAGLWDC--GPHDDLIEMLNLAIMCTGE 1059 (1082)
Q Consensus 987 ~slGvll~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~l~~li~~cl~~ 1059 (1082)
||+||++|||+++..+++..... ...+.+...|....... ..+.+... ..........+|+.+|++.
T Consensus 363 wSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred HHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHccC
Confidence 99999999999987665421100 00011222332211100 00000000 0001122455899999999
Q ss_pred CCCCCCCHHHHHHH
Q 045553 1060 SLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1060 ~p~~RPt~~ev~~~ 1073 (1082)
||++|||+.|++++
T Consensus 437 dP~kR~ta~e~L~H 450 (566)
T PLN03225 437 KGRQRISAKAALAH 450 (566)
T ss_pred CcccCCCHHHHhCC
Confidence 99999999999875
No 393
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=263.17 Aligned_cols=264 Identities=25% Similarity=0.320 Sum_probs=209.2
Q ss_pred HHHHHHHhcCccccceecccCceEEEEEEEcC------CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeee
Q 045553 793 YENVVRATAGFNVQNCIGSGGFGATYKAEIIP------GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGY 865 (1082)
Q Consensus 793 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~ 865 (1082)
.+++.....+++...++-+|.||.||.|.|.+ .+.|.||.++... .-....+..|.-.+....|||+..+.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 33444455667778889999999999996553 3556777665432 2334567788888888999999999998
Q ss_pred ecc-CCeEEEEEeecCCCCHHHHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC
Q 045553 866 HVS-EAEMFLIYNYLPGGNLEKFIQDR------PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN 938 (1082)
Q Consensus 866 ~~~-~~~~~lV~E~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 938 (1082)
+.+ ....+++|.++.-|+|..++... ..+.++-.+...++.|++.|++|||.+ +|||.||..+|+++|+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhh
Confidence 765 45789999999999999999832 245677778889999999999999999 99999999999999999
Q ss_pred CcEEEeecccceecCCCCCcccc-CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccH
Q 045553 939 LNAYLSDFGLARLLGTSETHATT-DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNI 1016 (1082)
Q Consensus 939 ~~~kl~DfGla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~ 1016 (1082)
.++||+|=.+++.+-+.+.+... .--....||+||.+....|+.++|||||||++|||+| |+.|+.+. +.
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI--------DP 504 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI--------DP 504 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc--------CH
Confidence 99999999999987666554322 2234568999999999999999999999999999987 88887633 22
Q ss_pred HHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1017 VAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
.+. ...+.+| .+-..|-+++.++..+|.-||...|++||++++++.-|+++
T Consensus 505 fEm-~~ylkdG---------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 505 FEM-EHYLKDG---------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred HHH-HHHHhcc---------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 222 2222333 22234668889999999999999999999999999999875
No 394
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.3e-29 Score=254.92 Aligned_cols=249 Identities=20% Similarity=0.320 Sum_probs=201.5
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 874 (1082)
.+.|+...+||+|+|++|-.+++. +.+.+|+|++++.- .++....+.|-.+..+. +||.+|-+..+|..+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 457999999999999999999654 57889999987642 23444555666555444 79999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
|.||++||+|--+++. .+.++++.++.+..+|+-||.|||+. ||++||+|..|+++|..|.+|++|||+++.- -
T Consensus 329 vieyv~ggdlmfhmqr--qrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~-l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG-L 402 (593)
T ss_pred EEEEecCcceeeehhh--hhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC-C
Confidence 9999999999766665 56899999999999999999999999 9999999999999999999999999999753 2
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
.....+.+++||+.|.|||.+.+..|....|.|++||+++||+.|+.||+-.-.+ ...++-.++.-+++.+..+
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~-n~d~ntedylfqvilekqi----- 476 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMD-NPDMNTEDYLFQVILEKQI----- 476 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCC-CcccchhHHHHHHHhhhcc-----
Confidence 2334566789999999999999999999999999999999999999999854321 1233444454444443321
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCC
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRP 1065 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RP 1065 (1082)
+ .|...+.+...+++.-++.||.+|-
T Consensus 477 ---r--iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 477 ---R--IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ---c--ccceeehhhHHHHHHhhcCCcHHhc
Confidence 1 2444456777888999999999985
No 395
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=4.8e-28 Score=261.72 Aligned_cols=238 Identities=29% Similarity=0.412 Sum_probs=195.5
Q ss_pred CceEEEEEEEc-CCeEEEEEEeecCcccc-HHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCHHHHHhh
Q 045553 813 GFGATYKAEII-PGVVVAVKRLSVGRFQG-VQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQD 890 (1082)
Q Consensus 813 ~~g~Vy~a~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 890 (1082)
+||.||+|... +++.+|+|++....... .+.+.+|++.+++++|+|++++++++......+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999776 48999999997765544 68899999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcccCCCcc
Q 045553 891 RPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYV 970 (1082)
Q Consensus 891 ~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~ 970 (1082)
.. .+++..+..++.+++++++|||+. +++|+||+|+||+++.++.++++|||.+....... ......++..|+
T Consensus 81 ~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~ 153 (244)
T smart00220 81 RG--RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYM 153 (244)
T ss_pred cc--CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCC
Confidence 43 389999999999999999999999 99999999999999999999999999998775432 233456888999
Q ss_pred cchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHH
Q 045553 971 APEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEML 1050 (1082)
Q Consensus 971 aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 1050 (1082)
+||...+..++.++|||++|++++++++|..||+.. .......... ..+..... ........++.
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~-------~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~ 218 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD-------DQLLELFKKI-GKPKPPFP-------PPEWKISPEAK 218 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-------CcHHHHHHHH-hccCCCCc-------cccccCCHHHH
Confidence 999999888999999999999999999999998632 1112222221 11111100 00001446899
Q ss_pred HHHHHcccCCCCCCCCHHHHHH
Q 045553 1051 NLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1051 ~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
+++.+|+..+|++||++.++++
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHccCCchhccCHHHHhh
Confidence 9999999999999999999986
No 396
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.8e-30 Score=255.89 Aligned_cols=262 Identities=23% Similarity=0.329 Sum_probs=194.6
Q ss_pred cCccccceecccCceEEEEEE-EcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeecc--------C
Q 045553 801 AGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS--------E 869 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~ 869 (1082)
..|.-..+||+|.||.||+|+ .++|+.||+|++-... ..-.....+|++++..++|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 345556789999999999995 4457889998764422 1223445789999999999999999998764 2
Q ss_pred CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
...|+||++++ -+|..++... ..+++..++.+++.++..||.|+|.. .|+|||+|+.|+|++.++.+||+|||++
T Consensus 97 ~t~ylVf~~ce-hDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 97 ATFYLVFDFCE-HDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ceeeeeHHHhh-hhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccc
Confidence 35899999995 4888888765 46799999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCc---cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 950 RLLGTSETH---ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 950 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
+.+...+.. ..+..+-|..|++||.+.+ ..|+++.|||+-||++.||++|.+-+..... ..-.+.+ +.+.
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte-----qqql~~I-s~Lc 245 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE-----QQQLHLI-SQLC 245 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH-----HHHHHHH-HHHh
Confidence 877543332 3445667999999999887 5699999999999999999999887764321 1111111 1111
Q ss_pred cCCCcccc---cc-ccCC----C-CC-------hHH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1026 QGRPCEFF---TA-GLWD----C-GP-------HDD------LIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 ~~~~~~~~---d~-~l~~----~-~~-------~~~------~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+....++. |. .+.. + .+ ++. ..+..+++..++..||++|++..+++.+
T Consensus 246 Gs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 246 GSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred ccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 11111110 00 0000 0 00 111 2367789999999999999999988765
No 397
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=2.5e-28 Score=283.73 Aligned_cols=262 Identities=19% Similarity=0.279 Sum_probs=183.3
Q ss_pred HhcCccccceecccCceEEEEEEE-----------------cCCeEEEEEEeecCccccHHHH--------------HHH
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-----------------IPGVVVAVKRLSVGRFQGVQQF--------------AAE 847 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-----------------~~~~~vavK~~~~~~~~~~~~~--------------~~e 847 (1082)
..++|++.++||+|+||.||+|.. .+++.||||++........++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 356899999999999999999953 2356899999875443322333 346
Q ss_pred HHHHhccCCCce-----eeEeeeecc--------CCeEEEEEeecCCCCHHHHHhhCC----------------------
Q 045553 848 IRTLGRVQHPNL-----VTLIGYHVS--------EAEMFLIYNYLPGGNLEKFIQDRP---------------------- 892 (1082)
Q Consensus 848 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~---------------------- 892 (1082)
+.++.+++|.++ ++++++|.. .+..++||||+++++|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 667777766654 667777653 356899999999999999987531
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcccCCCcccc
Q 045553 893 RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAP 972 (1082)
Q Consensus 893 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aP 972 (1082)
...+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||++..+............+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12356788999999999999999999 999999999999999999999999999976543322222223457899999
Q ss_pred hhcccCCC----------------------CchhhHHHHHHHHHHHHhCCC-CCCCCccC----CCCCccHHHHHHHHHh
Q 045553 973 EYAMTCRV----------------------SDKADVYSFGVVLLELISDKK-ALDPSFCS----FGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 973 E~~~~~~~----------------------~~~~Dv~slGvll~elltg~~-p~~~~~~~----~~~~~~~~~~~~~~~~ 1025 (1082)
|.+..... ..+.||||+||++|||++|.. |+.....- .....+...|... .
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~--~ 457 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY--K 457 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh--c
Confidence 98754221 134799999999999999875 55421100 0001122222211 1
Q ss_pred cCCCccccccccCCCCChHHHHHHHHHHHHcccCCC---CCCCCHHHHHHH
Q 045553 1026 QGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESL---SSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p---~~RPt~~ev~~~ 1073 (1082)
... ++-.. .........+++.+++..+| .+|+|+.|++++
T Consensus 458 ~~~----~~~~~----~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 458 GQK----YDFSL----LDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ccC----CCccc----ccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 111 11111 12234578889999999766 689999999864
No 398
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-29 Score=271.16 Aligned_cols=247 Identities=21% Similarity=0.289 Sum_probs=203.9
Q ss_pred ccccceecccCceEEEEEEEcCCe-EEEEEEeecC---ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 803 FNVQNCIGSGGFGATYKAEIIPGV-VVAVKRLSVG---RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~~~~-~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++....||-|+||.|-++...... .+|+|++++. +....+.+..|-++|...+.|.||+++..|.+.+..|+.||-
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa 501 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA 501 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence 445567999999999999766433 3788877543 344556778899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
|-||.++..++++ ..++..+...++..+.+|++|||++ +||+|||||+|.++|.+|-+|+.|||+|+.++.. .
T Consensus 502 ClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g--~ 574 (732)
T KOG0614|consen 502 CLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG--R 574 (732)
T ss_pred hcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC--C
Confidence 9999999999984 5788889999999999999999999 9999999999999999999999999999987644 3
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.+.+++||+.|.|||++.++..+.++|.||+|+++||+++|.+||.... .......++.+-+..
T Consensus 575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~d--------pmktYn~ILkGid~i-------- 638 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVD--------PMKTYNLILKGIDKI-------- 638 (732)
T ss_pred ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCc--------hHHHHHHHHhhhhhh--------
Confidence 4567899999999999999999999999999999999999999997432 222222332222111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPS-----MRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~~ 1073 (1082)
..|.........++++....+|.+|-- +.+|.++
T Consensus 639 -~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 639 -EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred -hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 345667778899999999999999974 5555443
No 399
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=281.69 Aligned_cols=244 Identities=25% Similarity=0.337 Sum_probs=187.2
Q ss_pred ccccceecccCce-EEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEeecC
Q 045553 803 FNVQNCIGSGGFG-ATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 803 ~~~~~~lg~G~~g-~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
|...+++|.|+.| .||+|... |+.||||++-.. ...-..+|+..++.- .|||||++++.-.++...|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 3445678999887 47888775 899999998643 234567899998877 6999999999999999999999999
Q ss_pred CCCHHHHHhhC-CC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC---C--CcEEEeecccceecC
Q 045553 881 GGNLEKFIQDR-PR-RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN---N--LNAYLSDFGLARLLG 953 (1082)
Q Consensus 881 ~gsL~~~l~~~-~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~--~~~kl~DfGla~~~~ 953 (1082)
..+|.+++... .. ....-...+.+..|++.|+++||+. +||||||||+||||+. + .+++|+|||+++.+.
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 67999999873 11 1111134567899999999999998 9999999999999975 3 479999999999886
Q ss_pred CCCC--ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 954 TSET--HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISD-KKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 954 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
.+.. ....+..||.+|+|||++....-+.++||||+|||+|+.++| .+||...... - ..++......
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R---------~-~NIl~~~~~L 732 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER---------Q-ANILTGNYTL 732 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh---------h-hhhhcCccce
Confidence 5443 235567899999999999998888899999999999998886 8999743211 0 0111111111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
..+. ...++ +..+||.+|++++|..||++.+|+.
T Consensus 733 ~~L~------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 733 VHLE------PLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred eeec------cCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1110 11122 8899999999999999999999975
No 400
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-27 Score=229.72 Aligned_cols=198 Identities=29% Similarity=0.441 Sum_probs=164.7
Q ss_pred ccceecccCceEEEEEE-EcCCeEEEEEEeecCc-cccHHHHHHHHHHHh-ccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 805 VQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGR-FQGVQQFAAEIRTLG-RVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
....||+|+||.|-+.+ ..+|...|+|++.... .+..++..+|+++.. ...+|.+|.++|........|+.||.| .
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-~ 128 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-D 128 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-h
Confidence 34569999999998875 4579999999997653 345567788888754 447999999999999999999999999 6
Q ss_pred CCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 882 GNLEKFIQD--RPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 882 gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
.||+.+-.. ..+...++.-+-+||..+.+||.|||++. .|+|||+||+|||++.+|++||||||.+..+.+.-.
T Consensus 129 tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA-- 204 (282)
T KOG0984|consen 129 TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA-- 204 (282)
T ss_pred hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhhhH--
Confidence 788877654 23668899999999999999999999986 899999999999999999999999999987743322
Q ss_pred ccCcccCCCcccchhccc----CCCCchhhHHHHHHHHHHHHhCCCCCCCCc
Q 045553 960 TTDVAGTFGYVAPEYAMT----CRVSDKADVYSFGVVLLELISDKKALDPSF 1007 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slGvll~elltg~~p~~~~~ 1007 (1082)
.+.-.|-..|+|||.+.. ..|+-|+||||+|+.+.||.+++.||+...
T Consensus 205 kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 205 KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 222356678999998853 478899999999999999999999998543
No 401
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.5e-29 Score=250.23 Aligned_cols=264 Identities=25% Similarity=0.355 Sum_probs=196.2
Q ss_pred cccceecccCceEEEEEE-EcCCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccC-----CeEEEE
Q 045553 804 NVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE-----AEMFLI 875 (1082)
Q Consensus 804 ~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lV 875 (1082)
+-.+.||.|+||.||.++ -.+|+.||.|++..- .-...+.+.+|++++..++|.|++..+++.... .+.|+|
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 345789999999999984 457999999998643 234567888999999999999999888866543 357889
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
.|.| ..+|+..+-. .+.++.+.+.-+..||++||.|||+. +|.||||||.|.+++.+...||||||+++....+
T Consensus 136 TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 136 TELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchh
Confidence 9999 5688888765 56788889999999999999999999 9999999999999999999999999999987776
Q ss_pred CCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCC-------CCccHHHHHHHHHhcC
Q 045553 956 ETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFG-------NGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~ 1027 (1082)
+...++.-+-|..|+|||.+++ ..|+.+.||||.||++.|++.++.-|..-.+... -+..-.+-++..- +|
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC-EG 288 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC-EG 288 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh-hh
Confidence 6666666677899999999987 5689999999999999999999887764221100 0000000011100 11
Q ss_pred CCccccccccCC---------CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1028 RPCEFFTAGLWD---------CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1028 ~~~~~~d~~l~~---------~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
--..++-...+. ..+.....+...+.+.++..||++|.+..+....+
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 000011000000 11223345567788899999999999998887654
No 402
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=2.2e-27 Score=260.81 Aligned_cols=203 Identities=25% Similarity=0.399 Sum_probs=173.7
Q ss_pred CccccceecccCceEEEEEE-EcCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
-|...+.||-|+||+|.++. ..+...+|+|.+.+.+. ......+.|-++|..-..+=||+++-.|.+.+.+|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 47777899999999999994 55577899999876543 334567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec-----
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL----- 952 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~----- 952 (1082)
|++||++-.+|-.. ..+++..++.++.+++.|+++.|.. |+|||||||+|||||.+|.+|++|||++.-+
T Consensus 710 YIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd 784 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 784 (1034)
T ss_pred ccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceeccc
Confidence 99999999998774 4788899999999999999999999 9999999999999999999999999998533
Q ss_pred ----CCCCCc--------------------------------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHH
Q 045553 953 ----GTSETH--------------------------------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLEL 996 (1082)
Q Consensus 953 ----~~~~~~--------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~el 996 (1082)
...+.. .....+||+.|+|||++....|+..+|.||.|||+|||
T Consensus 785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence 111100 01135699999999999999999999999999999999
Q ss_pred HhCCCCCCCCccC
Q 045553 997 ISDKKALDPSFCS 1009 (1082)
Q Consensus 997 ltg~~p~~~~~~~ 1009 (1082)
+.|+.||-...+.
T Consensus 865 ~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 865 LVGQPPFLADTPG 877 (1034)
T ss_pred hhCCCCccCCCCC
Confidence 9999999765443
No 403
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1e-26 Score=250.26 Aligned_cols=133 Identities=29% Similarity=0.459 Sum_probs=116.6
Q ss_pred hcCccccceecccCceEEEEE-EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccC-----C---CceeeEeeeecc--
Q 045553 800 TAGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-----H---PNLVTLIGYHVS-- 868 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~-- 868 (1082)
.++|.+.++||-|.|++||+| .....+.||+|+.+..... .+....|++++++++ | ..||++++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY-tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY-TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH-HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 478999999999999999999 5667899999998765322 345678999999984 3 369999998874
Q ss_pred --CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc
Q 045553 869 --EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD 936 (1082)
Q Consensus 869 --~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 936 (1082)
+.+.|+|+|++ |.+|..++.....+.++...+.+|+.||+.||.|||.+| +|||.||||+|||+.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 46899999999 889999999888889999999999999999999999999 999999999999994
No 404
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=2.5e-27 Score=230.70 Aligned_cols=257 Identities=19% Similarity=0.269 Sum_probs=197.0
Q ss_pred cCccccceecccCceEEEEE-EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccC-CCceeeEeeeeccC--CeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSE--AEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lV~ 876 (1082)
++|++.+++|+|-|+.||.| ...+.++++||+++. ...+.+.+|+.+++.++ ||||+++++...+. ....+|+
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 46899999999999999999 456788999999874 34577899999999997 99999999998865 5679999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC-CcEEEeecccceecCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN-LNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla~~~~~~ 955 (1082)
||+.+.+...+.. .++...+..++.+++.||.|+|+. ||+|||+||+|+|+|.. -..+++|+|+|.++.+.
T Consensus 115 E~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 115 EYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred hhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence 9999988877654 477788999999999999999999 99999999999999965 46999999999988765
Q ss_pred CCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh------cCC
Q 045553 956 ETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL------QGR 1028 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~ 1028 (1082)
.... ..+.+..|.-||.+-. ..|+..-|+|||||++..|+..+.||-.. .++...++..++-.-. -..
T Consensus 187 ~eYn--VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG---~dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 187 KEYN--VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG---HDNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred ceee--eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC---CCCHHHHHHHHHHhChHHHHHHHHH
Confidence 5443 2356788999999875 45788899999999999999999998532 2223333332221000 000
Q ss_pred CccccccccCC----------------CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCEFFTAGLWD----------------CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~~~d~~l~~----------------~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..-.+|+...+ +...-...++.+++.+.+..|-.+|||++|...+
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 11112222111 0011123678899999999999999999998753
No 405
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=2.3e-25 Score=234.91 Aligned_cols=210 Identities=33% Similarity=0.597 Sum_probs=185.0
Q ss_pred ecccCceEEEEEEEcC-CeEEEEEEeecCccc-cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCHHH
Q 045553 809 IGSGGFGATYKAEIIP-GVVVAVKRLSVGRFQ-GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNLEK 886 (1082)
Q Consensus 809 lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~ 886 (1082)
||+|++|.||++...+ ++.+++|++...... ..+.+.+|++.++.++|++++++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999997654 899999999765432 35678999999999999999999999999999999999999899999
Q ss_pred HHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-CCcEEEeecccceecCCCCCccccCccc
Q 045553 887 FIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-NLNAYLSDFGLARLLGTSETHATTDVAG 965 (1082)
Q Consensus 887 ~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGla~~~~~~~~~~~~~~~g 965 (1082)
++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+........ ......+
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~ 155 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVG 155 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccC
Confidence 998642 4689999999999999999999999 9999999999999999 89999999999987654321 2233457
Q ss_pred CCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChH
Q 045553 966 TFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHD 1044 (1082)
Q Consensus 966 t~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1044 (1082)
...|++||..... .++.++|+|++|++++++
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 8899999999887 888999999999999998
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1045 DLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1045 ~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 --PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred --HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 368899999999999999999999875
No 406
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=1e-26 Score=238.53 Aligned_cols=255 Identities=24% Similarity=0.320 Sum_probs=201.8
Q ss_pred cCccccceecccCceEEEEE-EEcCCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccC------Ce
Q 045553 801 AGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------AE 871 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 871 (1082)
.+|.-.+.+|.|.- .|..| ..-.++.||+|+.... .....+...+|...+..++|+|+++++.++... .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 45666778888887 55555 4445899999998554 234456778999999999999999999998754 35
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.|+||||| ..+|...++. .++=.++.++..|++.|++|||+. +|+||||||+||++..+..+||.|||+|+.
T Consensus 96 ~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcc
Confidence 79999999 6799999884 466788999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 952 LGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 952 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
-... ...+.++.+..|.|||++.+..+.+.+||||.||++.||++|+--|.+ +..+.+|.+..-.-|.+.+
T Consensus 168 e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g-------~d~idQ~~ki~~~lgtpd~ 238 (369)
T KOG0665|consen 168 EDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG-------KDHIDQWNKIIEQLGTPDP 238 (369)
T ss_pred cCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC-------chHHHHHHHHHHHhcCCCH
Confidence 5433 467778899999999999998899999999999999999999987763 4455666665544443322
Q ss_pred ccccccC----------------------------C--CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 FFTAGLW----------------------------D--CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~d~~l~----------------------------~--~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+-..+. . +.+.-....+..++.+|+-.+|++|-++++++++
T Consensus 239 ~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 239 SFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 2111110 0 0112234557889999999999999999999864
No 407
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93 E-value=2.3e-26 Score=251.38 Aligned_cols=197 Identities=23% Similarity=0.361 Sum_probs=168.9
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--------ccHHHHHHHHHHHhccC---CCceeeEeeeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--------QGVQQFAAEIRTLGRVQ---HPNLVTLIGYHV 867 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---h~niv~l~~~~~ 867 (1082)
...|...+.+|.|+||.|+.|..+ +...|+||.+.+.+. .....+-.|+++|..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 346888999999999999999544 467899998876532 11223557999999997 999999999999
Q ss_pred cCCeEEEEEeec-CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeec
Q 045553 868 SEAEMFLIYNYL-PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDF 946 (1082)
Q Consensus 868 ~~~~~~lV~E~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 946 (1082)
+++.+|++||.. ++-+|.+++..+ ..+++.++..|+.|++.|+++||+. +|||||||-+||.++.+|-+|++||
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeec
Confidence 999999999986 445899999874 4689999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCC
Q 045553 947 GLARLLGTSETHATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALD 1004 (1082)
Q Consensus 947 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~ 1004 (1082)
|.|.+...+ ....++||.+|.|||++.+.+| ...-|||++|+++|-++....||+
T Consensus 715 gsaa~~ksg---pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSG---PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCC---CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999875433 3445789999999999998876 456899999999999998888875
No 408
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=9.8e-25 Score=233.04 Aligned_cols=198 Identities=32% Similarity=0.517 Sum_probs=174.0
Q ss_pred ccccceecccCceEEEEEEEcC-CeEEEEEEeecCccc-cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 803 FNVQNCIGSGGFGATYKAEIIP-GVVVAVKRLSVGRFQ-GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
|++.+.||.|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5677899999999999997765 899999999866544 56788999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+++|.+++..... .+++..+..++.+++.++.+||+. +++|+|++|+||+++.++.++|+|||.+...........
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL 156 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence 9999999987532 278999999999999999999999 999999999999999999999999999987754431122
Q ss_pred cCcccCCCcccchhc-ccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 045553 961 TDVAGTFGYVAPEYA-MTCRVSDKADVYSFGVVLLELISDKKALD 1004 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slGvll~elltg~~p~~ 1004 (1082)
....++..|++||.. ....++.++|||+||++++||++|+.||+
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 345678899999998 66778889999999999999999999996
No 409
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=9.9e-28 Score=251.60 Aligned_cols=410 Identities=21% Similarity=0.201 Sum_probs=236.6
Q ss_pred CEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccC-cccccccCccccCCCCCcEEEccc
Q 045553 113 RVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSG-NQFNGTIPAFFGQSPGFQVVSLSF 191 (1082)
Q Consensus 113 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~ 191 (1082)
..++|..|+|+...|.+|+.+++|++||||+|.|+.+-|++|.++++|..|-+.+ |+|+....+.|++|..|+.|.+.-
T Consensus 70 veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNa 149 (498)
T KOG4237|consen 70 VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNA 149 (498)
T ss_pred eEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcCh
Confidence 4455566666644445566666666666666666655555666665555554444 555544345555555555555555
Q ss_pred CcccccCCcccccccccccEEEcccCccCCCCCc-cccCCCCccEEEccCCcCC------------CCcCccccCCCCCC
Q 045553 192 NLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPP-SLGNCTELRSLLLSSNMLQ------------GDIPSSFGQLVNLE 258 (1082)
Q Consensus 192 N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~------------~~~p~~~~~l~~L~ 258 (1082)
|++. -++...+..+++|..|.+.+|.+. .++. +|..+.+++.+++..|.+- ...|..++...-..
T Consensus 150 n~i~-Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 150 NHIN-CIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred hhhc-chhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 5555 444444444555555555555555 3332 5555555555555555521 11222222222233
Q ss_pred EEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCC-ccccCCCCCcEEEcCC
Q 045553 259 VLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLP-DSITRLPNLRVFWAPN 337 (1082)
Q Consensus 259 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p-~~l~~l~~L~~L~l~~ 337 (1082)
-..+.++++..+-+..|... ++.+ ...-.+.....+..| ..|..|++|+.|++++
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~--~esl----------------------~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsn 283 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCS--LESL----------------------PSRLSSEDFPDSICPAKCFKKLPNLRKLNLSN 283 (498)
T ss_pred hHHHHHHHhcccchhhhhhh--HHhH----------------------HHhhccccCcCCcChHHHHhhcccceEeccCC
Confidence 33333333332222222110 1111 000001112222333 4589999999999999
Q ss_pred CcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-ccCcccEEEecCCcceecCC
Q 045553 338 LNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SVPCMAVFNVSQNLLSGEIP 416 (1082)
Q Consensus 338 n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l~~L~~L~l~~N~l~~~~~ 416 (1082)
|+|+.+.+.+|.++..+++|+|..|+|...-...|.++..|+.|+|.+|+|+...|..| .+..|..|+|-.|++.
T Consensus 284 N~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~---- 359 (498)
T KOG4237|consen 284 NKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN---- 359 (498)
T ss_pred CccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc----
Confidence 99999999999999999999999999997777789999999999999999999999888 6889999999999985
Q ss_pred CCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCcee---EeeccCCcccCCCCCccccCCCcccccc
Q 045553 417 RISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFI---LHDFSNNLFTGPVPPFLIDSDSLSSRPY 493 (1082)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~n~~~g~~p~~~~~~~~l~~~~~ 493 (1082)
.+|...+..-++.....+ +.++. .+++.+. +.|+..-.|+..-|+...-.
T Consensus 360 ----CnC~l~wl~~Wlr~~~~~-------------~~~~C--q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~-------- 412 (498)
T KOG4237|consen 360 ----CNCRLAWLGEWLRKKSVV-------------GNPRC--QSPGFVRQIPISDVAFGDFRCGGPEELGCL-------- 412 (498)
T ss_pred ----CccchHHHHHHHhhCCCC-------------CCCCC--CCCchhccccchhccccccccCCccccCCC--------
Confidence 456555432222221111 11111 1111111 12222223333333221100
Q ss_pred ceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEE
Q 045553 494 YGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLN 573 (1082)
Q Consensus 494 ~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 573 (1082)
....=..-|.+.+ +++.+|++.+. .+|..+... .++|++.+|.++.+..+ .+.+| .+|
T Consensus 413 -------------~s~~cP~~c~c~~-tVvRcSnk~lk-~lp~~iP~d---~telyl~gn~~~~vp~~---~~~~l-~~d 470 (498)
T KOG4237|consen 413 -------------TSSPCPPPCTCLD-TVVRCSNKLLK-LLPRGIPVD---VTELYLDGNAITSVPDE---LLRSL-LLD 470 (498)
T ss_pred -------------CCCCCCCCcchhh-hhHhhcccchh-hcCCCCCch---hHHHhcccchhcccCHH---HHhhh-hcc
Confidence 0000012233333 45666666665 788877644 67888888888855433 55667 788
Q ss_pred ccCCCCCCCCcccccCCCCCCEEEcCCC
Q 045553 574 LSRNHLQGPLPSYINKMEDLKFLSLSLN 601 (1082)
Q Consensus 574 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 601 (1082)
|++|+|+......|.++++|..|-||+|
T Consensus 471 ls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 471 LSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred cccCceehhhcccccchhhhheeEEecC
Confidence 8888888666667778888888877765
No 410
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=2.9e-26 Score=254.91 Aligned_cols=253 Identities=22% Similarity=0.327 Sum_probs=205.7
Q ss_pred hcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..+|.....+|.|+||.||||+ ..+++..|+|+++........-.+.|+-+++..+||||+.+++.+...+..|+.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 4568888999999999999994 567999999999987777777888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+.+|+|++.-+. ...+++.++..++++..+|++|||+. +-+|||||-.||++++.+.+|++|||.+..+... ..
T Consensus 94 cgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitat-i~ 167 (829)
T KOG0576|consen 94 CGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITAT-IA 167 (829)
T ss_pred cCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhh-hh
Confidence 999999998876 45789999999999999999999999 9999999999999999999999999998776432 22
Q ss_pred cccCcccCCCcccchhc---ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 959 ATTDVAGTFGYVAPEYA---MTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
+...+.||+.|||||+. ..+.|..++|||+.|+...|+-.-..|..... ..+..... ....+++
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh--------pmr~l~Lm-----TkS~~qp 234 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH--------PMRALFLM-----TKSGFQP 234 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc--------hHHHHHHh-----hccCCCC
Confidence 44567899999999987 35678999999999999999877666643211 11111111 1122222
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.-.. .+......+.++++.|+..+|++||++..+++
T Consensus 235 p~lk-Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 235 PTLK-DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred Cccc-CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 2221 23456778999999999999999999866543
No 411
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.91 E-value=3.6e-25 Score=238.95 Aligned_cols=199 Identities=25% Similarity=0.299 Sum_probs=170.0
Q ss_pred HhcCccccceecccCceEEEEEE-EcCCeEEEEEEeecCccccHHHHHHHHHHHhccC------CCceeeEeeeeccCCe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAE-IIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ------HPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~~~~~~~ 871 (1082)
.-.+|.+....|+|-|++|..|. ...|..||||+|...... .+.=.+|+++|++++ --|.++++..|....+
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 34679999999999999999995 445889999999865432 233468999999995 3478999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-cEEEeecccc
Q 045553 872 MFLIYNYLPGGNLEKFIQDRP-RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL-NAYLSDFGLA 949 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla 949 (1082)
+|+|+|-+ .-+|.+++...+ .-.+....+..++.|+.-||..|-.. +|+|.||||.|||+++.. .+||||||.|
T Consensus 509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCccc
Confidence 99999988 679999999865 34678889999999999999999998 999999999999998765 6899999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDP 1005 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~ 1005 (1082)
...+..+. +.+.-+..|.|||++.|..|+...|+||.||.+||+.||+..|.+
T Consensus 585 ~~~~enei---tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 585 SFASENEI---TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred cccccccc---cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 87654432 345567899999999999999999999999999999999998864
No 412
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-24 Score=217.85 Aligned_cols=253 Identities=19% Similarity=0.299 Sum_probs=191.3
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEee-eeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIG-YHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~-~~~~~~~~~lV~E 877 (1082)
+.|.+.+.+|+|.||.+-+++.+ +.+.+++|.+.... ...++|.+|+..--.+ .|.||+.-++ .|+..+.+++++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 46889999999999999999765 46889999887553 3467899998765555 4889998776 5677789999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE-cCC-CcEEEeecccceecCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL-DNN-LNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill-~~~-~~~kl~DfGla~~~~~~ 955 (1082)
|++.|+|.+-+.. ..+.+....+++.|+++|+.|||++ .+||||||.+|||+ +.| .++|+||||+++..+..
T Consensus 103 ~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 103 FAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred cCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 9999999998875 4588889999999999999999999 99999999999999 344 48999999999865432
Q ss_pred CCccccCcccCCCcccchhcccC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTC-----RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
-.. ..-+-.|.+||..... ...+.+|||.||+++|.++||+.||..... ....++.|.+..- +...
T Consensus 177 V~~----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~---~d~~Y~~~~~w~~--rk~~ 247 (378)
T KOG1345|consen 177 VKY----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASI---MDKPYWEWEQWLK--RKNP 247 (378)
T ss_pred ehh----hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhc---cCchHHHHHHHhc--ccCc
Confidence 111 2235579999987532 346789999999999999999999985433 3455666655432 2222
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLK 1075 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~ 1075 (1082)
..- +... ...+.+.++.++-+.++|++|-...++.++..
T Consensus 248 ~~P--~~F~----~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 248 ALP--KKFN----PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred cCc--hhhc----ccCHHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence 211 1111 22356778888889999999966666655543
No 413
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=2.2e-24 Score=230.25 Aligned_cols=269 Identities=25% Similarity=0.369 Sum_probs=199.1
Q ss_pred HHHHHhcCccccceecccCceEEEEEEEc----CCeEEEEEEeecCccccHHHHHHHHHHHhccC-CCceeeEeeeeccC
Q 045553 795 NVVRATAGFNVQNCIGSGGFGATYKAEII----PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSE 869 (1082)
Q Consensus 795 ~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~ 869 (1082)
.+....+.|...++||+|.|++||+|... ..+.||+|.+.... ....+..|++.+..+. +.||+++.+++...
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 34445677999999999999999999432 47899999987653 3456889999999994 89999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-CCcEEEeeccc
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-NLNAYLSDFGL 948 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGl 948 (1082)
+...+|+||++.....++... ++...+..+++.+..||+++|.. |||||||||+|++.+. .+.-.|+|||+
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred CeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechh
Confidence 999999999999999998875 67889999999999999999999 9999999999999984 46789999999
Q ss_pred ceecCCCC------C-------------------------------------ccccCcccCCCcccchhcccC-CCCchh
Q 045553 949 ARLLGTSE------T-------------------------------------HATTDVAGTFGYVAPEYAMTC-RVSDKA 984 (1082)
Q Consensus 949 a~~~~~~~------~-------------------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~ 984 (1082)
|....... . .......||++|+|||++... ..+.++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 97221000 0 011135699999999999764 578899
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHH------HHHHHhcCC--Ccc---------------ccc-cccCC-
Q 045553 985 DVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAW------ASMLLLQGR--PCE---------------FFT-AGLWD- 1039 (1082)
Q Consensus 985 Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~--~~~---------------~~d-~~l~~- 1039 (1082)
||||.||++.-+++++.||-....+.+.-..+... .+.+...|. +.+ -++ ..+..
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~ 339 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS 339 (418)
T ss_pred ceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence 99999999999999999997543322211111110 011111121 000 000 00000
Q ss_pred --------CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 --------CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 --------~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...+..+..+..+..+|++.+|.+|-+++|.+++
T Consensus 340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0011223478899999999999999999998764
No 414
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=9.9e-23 Score=264.40 Aligned_cols=199 Identities=19% Similarity=0.203 Sum_probs=103.7
Q ss_pred ccccCCCCCcEEEcccCc------ccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCc
Q 045553 176 AFFGQSPGFQVVSLSFNL------LSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPS 249 (1082)
Q Consensus 176 ~~~~~l~~L~~L~L~~N~------l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 249 (1082)
.+|.++++|+.|.+..+. +...+|..+..-..+|+.|.+.++.++ .+|..+ ...+|+.|+|++|++. .++.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 455666666666665442 222344444322234666666666655 455544 3456666666666665 4555
Q ss_pred cccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCC
Q 045553 250 SFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPN 329 (1082)
Q Consensus 250 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~ 329 (1082)
.+..+++|+.|+|++|...+.+|. ++.+++|+.|++++|. ....+|..+..+++
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~-------------------------~L~~lp~si~~L~~ 682 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCS-------------------------SLVELPSSIQYLNK 682 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCC-------------------------CccccchhhhccCC
Confidence 555666666666665543334443 5555666666665431 11244555555666
Q ss_pred CcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecC
Q 045553 330 LRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQ 408 (1082)
Q Consensus 330 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~ 408 (1082)
|+.|++++|...+.+|..+ .+++|+.|+|++|...+.+|.. .++|+.|+|++|.+.. +|..+.+++|+.|++.+
T Consensus 683 L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~-lP~~~~l~~L~~L~l~~ 756 (1153)
T PLN03210 683 LEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEE-FPSNLRLENLDELILCE 756 (1153)
T ss_pred CCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCcccc-ccccccccccccccccc
Confidence 6666666554444444433 4556666666665544344432 2455666666666542 33333445555554443
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=2.3e-22 Score=260.92 Aligned_cols=270 Identities=19% Similarity=0.205 Sum_probs=166.1
Q ss_pred ccccCCCCCCEEEcccCC------CcccCChhhcCCC-CCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCc
Q 045553 104 RAIGDLTQLRVLLLAFNG------FSGELPLEIGQLS-LLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPA 176 (1082)
Q Consensus 104 ~~l~~l~~L~~L~L~~n~------l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 176 (1082)
.+|.++.+|+.|.+..+. +...+|+.|..++ +|+.|++.++.++ .+|..| ...+|++|+|++|++. .++.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 457777777777776543 2234666666664 5777777777776 667666 4677777788777776 5666
Q ss_pred cccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCC
Q 045553 177 FFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVN 256 (1082)
Q Consensus 177 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 256 (1082)
.+..+++|+.|+|++|.....+|. + ..+++|++|+|++|.....+|..+.++++|+.|++++|...+.+|..+ ++++
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-l-s~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-L-SMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-c-ccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 667777777777777654446664 2 246777777777776555777777777777777777765444566554 6777
Q ss_pred CCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcC
Q 045553 257 LEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAP 336 (1082)
Q Consensus 257 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~ 336 (1082)
|+.|++++|.....+|.. .++|+.|++++|.+. .+|..+ .+++|+.|.+.
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~--------------------------~lP~~~-~l~~L~~L~l~ 755 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE--------------------------EFPSNL-RLENLDELILC 755 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCccc--------------------------cccccc-ccccccccccc
Confidence 777777777655455533 356677777665332 233333 35566666665
Q ss_pred CCcccC-------CCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCC
Q 045553 337 NLNLEG-------IFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQN 409 (1082)
Q Consensus 337 ~n~l~~-------~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N 409 (1082)
++.... ..+..+...++|+.|+|++|...+.+|.+++++++|+.|+|++|...+.+|....+++|+.|++++|
T Consensus 756 ~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c 835 (1153)
T PLN03210 756 EMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGC 835 (1153)
T ss_pred ccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCC
Confidence 533211 1111222345667777777665556666677777777777766644334444444444444444443
No 416
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=4.2e-24 Score=213.02 Aligned_cols=249 Identities=21% Similarity=0.316 Sum_probs=194.7
Q ss_pred ccceecccCceEEEEEEEcCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 805 VQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
..-+|.+...|..|+|+|. |..+++|++..... ...+.|.+|+-.++.+.||||.++++.|.......++..||+.|
T Consensus 194 l~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g 272 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG 272 (448)
T ss_pred hhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence 3456888999999999998 66777788765432 33467999999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccC
Q 045553 883 NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTD 962 (1082)
Q Consensus 883 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 962 (1082)
||+..+|+...-..+-.++.+++.++|+|++|||+.- |-|.---+.++.+++|++.+++|+= +-+++- .....
T Consensus 273 slynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarism-ad~kfs-----fqe~g 345 (448)
T KOG0195|consen 273 SLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISM-ADTKFS-----FQEVG 345 (448)
T ss_pred HHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheec-ccceee-----eeccc
Confidence 9999999987777788899999999999999999973 2233346899999999999888741 112111 11112
Q ss_pred cccCCCcccchhcccCCCC---chhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 963 VAGTFGYVAPEYAMTCRVS---DKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 963 ~~gt~~y~aPE~~~~~~~~---~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
..-.+.|++||.++.++.+ .++|+|||++++||+.|+..||....+- +.-.. +.-..++-
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspm--------ecgmk---------ialeglrv 408 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPM--------ECGMK---------IALEGLRV 408 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCch--------hhhhh---------hhhccccc
Confidence 2346889999999876543 4799999999999999999999743221 11011 11123444
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..|+..+..+.+++.-|++.||.+||.+..|+-.|++++
T Consensus 409 ~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 409 HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 567788889999999999999999999999999999865
No 417
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.89 E-value=3.7e-25 Score=232.39 Aligned_cols=391 Identities=22% Similarity=0.213 Sum_probs=278.9
Q ss_pred CCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcC-CCCCCCCCccccCCCCCCeEEccCcccccc
Q 045553 95 SDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSF-NSFHGPIPPTLQNCSSLRLINLSGNQFNGT 173 (1082)
Q Consensus 95 ~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 173 (1082)
.|.|+..-|.+|+.+.+|+.|||++|+|+.+-|++|..+..|..|-+-+ |+|+......|.+|.+|+.|.+.-|++.-.
T Consensus 76 qN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Ci 155 (498)
T KOG4237|consen 76 QNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCI 155 (498)
T ss_pred cCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcch
Confidence 4778777788999999999999999999999999999999998887776 999965567899999999999999999988
Q ss_pred cCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccC------------CCCCccccCCCCccEEEccCC
Q 045553 174 IPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLT------------GSIPPSLGNCTELRSLLLSSN 241 (1082)
Q Consensus 174 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~------------~~~~~~~~~l~~L~~L~L~~N 241 (1082)
..+.|..|++|..|.+..|.+. .++...+..+.+++.+.++.|.+. ...|..++.+.-..-..+.++
T Consensus 156 r~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~ 234 (498)
T KOG4237|consen 156 RQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYK 234 (498)
T ss_pred hHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHH
Confidence 8899999999999999999999 888877778999999999999833 344445555555555566666
Q ss_pred cCCCCcCccccCC-CCCCEEeCCCCcCcccCC-ccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCC
Q 045553 242 MLQGDIPSSFGQL-VNLEVLDLSRNFLSGIVP-SELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGG 319 (1082)
Q Consensus 242 ~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~ 319 (1082)
++....+..|... ..+..=-.+.+...++.| ..|.++++|+.|++++ |.+++.
T Consensus 235 Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsn-------------------------N~i~~i 289 (498)
T KOG4237|consen 235 RINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSN-------------------------NKITRI 289 (498)
T ss_pred HhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCC-------------------------Cccchh
Confidence 6664444444432 222222223333333444 4688999999999988 455666
Q ss_pred CCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccC-------
Q 045553 320 LPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLL------- 392 (1082)
Q Consensus 320 ~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~------- 392 (1082)
-+.+|.++..+++|++..|+|..+....|.++..|+.|+|.+|+|+..-|..|..+.+|.+|+|-.|++.-.-
T Consensus 290 ~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~ 369 (498)
T KOG4237|consen 290 EDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGE 369 (498)
T ss_pred hhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHH
Confidence 7788999999999999999999988889999999999999999999888999999999999999999875321
Q ss_pred ----------CCCcccCcccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCC
Q 045553 393 ----------PEEVSVPCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNG 462 (1082)
Q Consensus 393 ----------p~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1082)
|..-+-..++.+.++++.+.. ..|. .+++. +|-
T Consensus 370 Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~-------~~c~---------------------~~ee~-~~~-------- 412 (498)
T KOG4237|consen 370 WLRKKSVVGNPRCQSPGFVRQIPISDVAFGD-------FRCG---------------------GPEEL-GCL-------- 412 (498)
T ss_pred HHhhCCCCCCCCCCCCchhccccchhccccc-------cccC---------------------Ccccc-CCC--------
Confidence 111111122333333332210 0000 01110 000
Q ss_pred ceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccC
Q 045553 463 LFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHC 542 (1082)
Q Consensus 463 ~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~ 542 (1082)
-+++=|+ .+..+... -..+...++--...+|.+. .++.+.+|.+. .+|... +
T Consensus 413 -----------~s~~cP~---~c~c~~tV----vRcSnk~lk~lp~~iP~d~------telyl~gn~~~-~vp~~~---~ 464 (498)
T KOG4237|consen 413 -----------TSSPCPP---PCTCLDTV----VRCSNKLLKLLPRGIPVDV------TELYLDGNAIT-SVPDEL---L 464 (498)
T ss_pred -----------CCCCCCC---Ccchhhhh----HhhcccchhhcCCCCCchh------HHHhcccchhc-ccCHHH---H
Confidence 0111111 11111100 0112222222233444433 57889999988 899884 4
Q ss_pred CcccEEEccCCcccccCccccCCCCCCCEEEccCC
Q 045553 543 KCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRN 577 (1082)
Q Consensus 543 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 577 (1082)
++| .+|+++|+|.......|.++++|.+|-|++|
T Consensus 465 ~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 465 RSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 557 8999999999888889999999999999987
No 418
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=7.5e-24 Score=267.12 Aligned_cols=196 Identities=16% Similarity=0.209 Sum_probs=140.5
Q ss_pred ccCC-CceeeEeeeec-------cCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 045553 853 RVQH-PNLVTLIGYHV-------SEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVL 924 (1082)
Q Consensus 853 ~l~h-~niv~l~~~~~-------~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 924 (1082)
..+| +||+++++++. ..+..+.++||+ +++|.++++.. ...+++.++..++.||++||+|||+. +|+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 3455 57777888762 234577888988 67999999754 45699999999999999999999999 999
Q ss_pred eccCCCCCEEEcC-------------------CCcEEEeecccceecCCCC---------------CccccCcccCCCcc
Q 045553 925 HRDIKPSNILLDN-------------------NLNAYLSDFGLARLLGTSE---------------THATTDVAGTFGYV 970 (1082)
Q Consensus 925 H~Dlk~~Nill~~-------------------~~~~kl~DfGla~~~~~~~---------------~~~~~~~~gt~~y~ 970 (1082)
||||||+|||++. ++.+|++|||+++...... ........||+.|+
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999954 4456666777665421100 00011245788999
Q ss_pred cchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHH
Q 045553 971 APEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEML 1050 (1082)
Q Consensus 971 aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 1050 (1082)
|||++.+..++.++|||||||++|||++|..|+.... ..+.... ... +.+. .........
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----------~~~~~~~-~~~----~~~~-----~~~~~~~~~ 242 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----------RTMSSLR-HRV----LPPQ-----ILLNWPKEA 242 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----------HHHHHHH-Hhh----cChh-----hhhcCHHHH
Confidence 9999999999999999999999999999888764210 1111111 110 0110 011123456
Q ss_pred HHHHHcccCCCCCCCCHHHHHHH
Q 045553 1051 NLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1051 ~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.++.+|++++|.+||+|.||+++
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhhc
Confidence 78899999999999999999764
No 419
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=2e-22 Score=206.46 Aligned_cols=168 Identities=19% Similarity=0.192 Sum_probs=128.9
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|+|.++++.+ ...+++..++.++.|++.||+|||+. + ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc-----
Confidence 6899999865 45699999999999999999999998 5 999999999999999 99998764322
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
..|++.|+|||++.+..++.++|||||||++|||++|+.||..... ............... ++... ..
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~---~~~~~-~~ 131 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE-------LSAILEILLNGMPAD---DPRDR-SN 131 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-------hcHHHHHHHHHhccC---Ccccc-cc
Confidence 2588999999999999999999999999999999999999864321 112222211111100 00000 11
Q ss_pred ChHHHH--HHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1042 PHDDLI--EMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1042 ~~~~~~--~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
+..... ++.+++.+|++.+|++||++.|+++++..+.
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 222333 6999999999999999999999999987653
No 420
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=2.1e-21 Score=218.26 Aligned_cols=259 Identities=22% Similarity=0.245 Sum_probs=197.3
Q ss_pred CccccceecccCceEEEEEEEcC--CeEEEEEEeecCccccHHHHHHHHHHHhccCC----CceeeEeeee-ccCCeEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIP--GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQH----PNLVTLIGYH-VSEAEMFL 874 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~~~l 874 (1082)
+|.+.++||+|+||.||.|.... ...+|+|............+..|..++..+.. +++..+++.+ ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999996554 35789998776533322267788888888873 6899999988 57788999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC-----CcEEEeecccc
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN-----LNAYLSDFGLA 949 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-----~~~kl~DfGla 949 (1082)
||+.+ |.+|.++....+.+.++..++.+|+.|++.+|.++|+. |++||||||.|+++... ..+++.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 88999998777668899999999999999999999999 99999999999999865 46999999999
Q ss_pred e--ecCCCCC-----c-c-ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHH
Q 045553 950 R--LLGTSET-----H-A-TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWA 1020 (1082)
Q Consensus 950 ~--~~~~~~~-----~-~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~ 1020 (1082)
+ .+..... . . .....||..|+++..+.+.+.+.+.|+||+++++.|+..|..||...... .. ..-+
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~----~~-~~~~ 249 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMT----DL-KSKF 249 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccccc----ch-HHHH
Confidence 8 3321111 1 1 23456999999999999999999999999999999999999998543211 11 1111
Q ss_pred HHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1021 SMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1021 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
........... .....+.++.++...+-..+..++|....+...+++..
T Consensus 250 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 250 EKDPRKLLTDR---------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred HHHhhhhcccc---------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 11111111110 11122345666666666689999999999998887653
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=6.3e-22 Score=237.54 Aligned_cols=74 Identities=22% Similarity=0.370 Sum_probs=37.6
Q ss_pred CCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEc
Q 045553 135 LLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILL 214 (1082)
Q Consensus 135 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L 214 (1082)
.-..|+|++|.++ .+|..+. ++|+.|++++|+++ .+|.. .++|++|+|++|+|+ .+|.. .++|+.|++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l----p~sL~~L~L 269 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL----PPGLLELSI 269 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc----ccccceeec
Confidence 3556666666666 5565553 25666666666666 23321 345555555555555 33321 124444444
Q ss_pred ccCccC
Q 045553 215 AANSLT 220 (1082)
Q Consensus 215 ~~N~l~ 220 (1082)
++|.++
T Consensus 270 s~N~L~ 275 (788)
T PRK15387 270 FSNPLT 275 (788)
T ss_pred cCCchh
Confidence 444444
No 422
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=2.5e-21 Score=199.33 Aligned_cols=259 Identities=17% Similarity=0.226 Sum_probs=198.4
Q ss_pred hcCccccceecccCceEEEEE-EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.-.|++.++||+|.||+++.| .+-++..||||.-... .+..++..|++..+.+. .++|..++-|..++.+-.+|+|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 457999999999999999999 4667999999986543 33466788888888885 6899999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC-----CcEEEeecccceec
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN-----LNAYLSDFGLARLL 952 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-----~~~kl~DfGla~~~ 952 (1082)
.+ |-||+++..-. ++.++..++..||.|++.-++|+|++ ..|.|||||+|+||..- ..+.|+|||+|+.+
T Consensus 105 LL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred hh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 99 88999998877 67899999999999999999999999 99999999999999743 35899999999998
Q ss_pred CCCCCcc------ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 953 GTSETHA------TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 953 ~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
..+.+.. .....||.+||+-....+.+.+.+.|+-|+|.|+++++-|..||.....+ ...+-.+ .+.+
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~-----tnK~kYe-KIGe 253 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD-----TNKEKYE-KIGE 253 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc-----chHHHHH-Hhcc
Confidence 7666542 34567999999999999999999999999999999999999999764322 1111111 1111
Q ss_pred CCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1027 GRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1027 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
.+...-++. +. +..++++..-+.-.-..+-++-|+..-+...+..
T Consensus 254 ~Kr~T~i~~-Lc----~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~d 298 (449)
T KOG1165|consen 254 TKRSTPIEV-LC----EGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDD 298 (449)
T ss_pred ccccCCHHH-HH----hcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 111111111 11 1223455555555555577777877666555543
No 423
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=1.1e-21 Score=235.48 Aligned_cols=119 Identities=26% Similarity=0.333 Sum_probs=57.7
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSL 600 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1082)
++|++++|+|. .+|.. ..+|+.|++++|+|+.+ |.. ..+|+.|+|++|+|++ +|.. .++|+.|++++
T Consensus 345 q~LdLS~N~Ls-~LP~l----p~~L~~L~Ls~N~L~~L-P~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~ 411 (788)
T PRK15387 345 QELSVSDNQLA-SLPTL----PSELYKLWAYNNRLTSL-PAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSG 411 (788)
T ss_pred ceEecCCCccC-CCCCC----CcccceehhhccccccC-ccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccC
Confidence 34555555554 34432 12355555666665532 322 2345566666666553 3322 23455555555
Q ss_pred CcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCC
Q 045553 601 NNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPP 657 (1082)
Q Consensus 601 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 657 (1082)
|+|+ .+|..+ .+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++.
T Consensus 412 N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 412 NRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred CcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 5555 234322 23455555555555 4455555555555555555555544443
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1e-21 Score=218.97 Aligned_cols=166 Identities=22% Similarity=0.221 Sum_probs=130.9
Q ss_pred HHHHhcCccccceecccCceEEEEEEEc--CCeEEEEEEeecC-----ccccHHHHHHHHHHHhccCCCceee-Eeeeec
Q 045553 796 VVRATAGFNVQNCIGSGGFGATYKAEII--PGVVVAVKRLSVG-----RFQGVQQFAAEIRTLGRVQHPNLVT-LIGYHV 867 (1082)
Q Consensus 796 ~~~~~~~~~~~~~lg~G~~g~Vy~a~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~ 867 (1082)
......+|.+.+.||+|+||+||+|... +++.||||++... .....+.|.+|++++++++|+|+++ ++++
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 3445678999999999999999999654 5788899987532 1223456899999999999999985 4432
Q ss_pred cCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccC-CCCCEEEcCCCcEEEeec
Q 045553 868 SEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDI-KPSNILLDNNLNAYLSDF 946 (1082)
Q Consensus 868 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-k~~Nill~~~~~~kl~Df 946 (1082)
+..++||||+++++|... ... . ...++.++++|++|||+. +|+|||| ||+||+++.++.+||+||
T Consensus 91 --~~~~LVmE~~~G~~L~~~-~~~-----~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 91 --GKDGLVRGWTEGVPLHLA-RPH-----G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred --CCcEEEEEccCCCCHHHh-Ccc-----c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 468999999999999632 111 1 146788999999999999 9999999 999999999999999999
Q ss_pred ccceecCCCCCcc-------ccCcccCCCcccchhccc
Q 045553 947 GLARLLGTSETHA-------TTDVAGTFGYVAPEYAMT 977 (1082)
Q Consensus 947 Gla~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~ 977 (1082)
|+|+.+....... .....+++.|+|||++..
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 9999775433211 134668889999999864
No 425
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.9e-21 Score=191.51 Aligned_cols=259 Identities=22% Similarity=0.270 Sum_probs=199.4
Q ss_pred hcCccccceecccCceEEEEE-EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCC-CceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKA-EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQH-PNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lV~E 877 (1082)
.+.|++.++||.|+||.+|.| ...+|..||||.-+.... ..+...|.++.+.++| ..|..+..|..+...-.+|||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 467999999999999999999 567799999999765432 3457788888888876 678888888888999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC---CCcEEEeecccceecCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN---NLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfGla~~~~~ 954 (1082)
.+ |.||+++.... .+.++..+++-.+-|++.-++|+|.+ +++||||||+|+|+.- ...+.++|||+|+.+..
T Consensus 92 LL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred cc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 99 88999999877 56799999999999999999999999 9999999999999974 35789999999998754
Q ss_pred CCCc------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 955 SETH------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 955 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
..+. ......||.+|.+-....+.+.+.+.|+-|+|.++..+--|..||...... .-.+..+. +.+.+
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~-----tk~QKyEk-I~EkK 240 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA-----TKKQKYEK-ISEKK 240 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh-----hHHHHHHH-HHHhh
Confidence 4332 223467999999999988888899999999999999999999999754322 11111111 11111
Q ss_pred CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 045553 1029 PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQ 1076 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~ 1076 (1082)
....+. .+.. ..+.++.-.+.-|-..--++-|+..-+-+.++-
T Consensus 241 ~s~~ie-~LC~----G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFri 283 (341)
T KOG1163|consen 241 MSTPIE-VLCK----GFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRI 283 (341)
T ss_pred cCCCHH-HHhC----CCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHH
Confidence 111111 1111 224567777788888888888887766665543
No 426
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.82 E-value=1.9e-18 Score=196.41 Aligned_cols=260 Identities=29% Similarity=0.419 Sum_probs=199.5
Q ss_pred ccccceecccCceEEEEEEEcCCeEEEEEEeecCccc---cHHHHHHHHHHHhccCCC-ceeeEeeeeccCCeEEEEEee
Q 045553 803 FNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ---GVQQFAAEIRTLGRVQHP-NLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lV~E~ 878 (1082)
|.+.+.||.|+||.||++... ..+|+|.+...... ....+.+|+..++.+.|+ +++++.+++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667789999999999999766 78899998765432 367899999999999988 799999999777778999999
Q ss_pred cCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-cEEEeecccceecCCCC
Q 045553 879 LPGGNLEKFIQDRPR-RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL-NAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~~~ 956 (1082)
+.++++.+++..... ..+.......++.|++.++.|+|+. +++|||+||+||+++... .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977765422 2688999999999999999999999 999999999999999988 79999999998665443
Q ss_pred Cc-----cccCcccCCCcccchhccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 957 TH-----ATTDVAGTFGYVAPEYAMT---CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 957 ~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
.. ......|+..|+|||...+ ..+....|+|++|++++++++|..||...... ....+.........
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~- 231 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----SATSQTLKIILELP- 231 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc----ccHHHHHHHHHhcC-
Confidence 32 2356789999999999987 57889999999999999999999996533210 01111111111111
Q ss_pred CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. .................+.+++..|+..+|..|.++.+....
T Consensus 232 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 TP-SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred Cc-ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11 000000000001223578899999999999999998887653
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=3e-20 Score=221.20 Aligned_cols=252 Identities=18% Similarity=0.192 Sum_probs=188.0
Q ss_pred ccceecccCceEEEEEEE-cCCeEEEEEEeecC--cccc----HHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 805 VQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG--RFQG----VQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~--~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
..+++|.|++|.|+.+.. ......+.|.+... .... ...+..|+-+-..+.|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 457899999998887743 33444444443311 1111 1225668888888999999998888887777777799
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++ +|..++... ..++..++..++.|+..|++|+|+. +|.|||+|++|++++.++.+||+|||.+..+..+..
T Consensus 402 ~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred cccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 9998 999998863 3578888999999999999999999 999999999999999999999999999988765444
Q ss_pred ---ccccCcccCCCcccchhcccCCCCc-hhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 958 ---HATTDVAGTFGYVAPEYAMTCRVSD-KADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 958 ---~~~~~~~gt~~y~aPE~~~~~~~~~-~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
......+|+..|+|||++.+.+|.+ ..||||.|+++..|.+|+.||....... ..+ ......++....
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~---~~~----~~~~~~~~~~~~- 547 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSD---NSF----KTNNYSDQRNIF- 547 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccc---cch----hhhccccccccc-
Confidence 4567788999999999999999876 5899999999999999999997432221 110 000000000000
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
... .......+.+...++.++++.+|.+|-|+.+|++
T Consensus 548 -~~~-~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 548 -EGP-NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred -cCh-HHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 000 0011344667889999999999999999999975
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.80 E-value=1.4e-19 Score=219.21 Aligned_cols=117 Identities=21% Similarity=0.354 Sum_probs=53.3
Q ss_pred CCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcc
Q 045553 136 LEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLA 215 (1082)
Q Consensus 136 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~ 215 (1082)
.+.|+++++.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+++ .+|..+. .+|+.|+|+
T Consensus 180 ~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L~Ls 249 (754)
T PRK15370 180 KTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP---DTIQEMELS 249 (754)
T ss_pred ceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh---ccccEEECc
Confidence 344555555444 3443332 24555555555554 2333222 24555555555544 3443332 244555555
Q ss_pred cCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCc
Q 045553 216 ANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLS 268 (1082)
Q Consensus 216 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 268 (1082)
+|+++ .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|+++
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt 296 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR 296 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc
Confidence 55554 3443332 24555555555555 3444332 34555555555554
No 429
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=1.7e-19 Score=186.50 Aligned_cols=171 Identities=12% Similarity=0.133 Sum_probs=133.5
Q ss_pred HhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHH---------HHHHHHHHHhccCCCceeeEeeeeccC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQ---------QFAAEIRTLGRVQHPNLVTLIGYHVSE 869 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~---------~~~~e~~~l~~l~h~niv~l~~~~~~~ 869 (1082)
..++|++.+++|.|+||.||.++. ++..+|||.+......... .+.+|++.+.+++|++|..+..++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 467899999999999999999866 5778999999754332222 268999999999999999998876533
Q ss_pred --------CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcE
Q 045553 870 --------AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNA 941 (1082)
Q Consensus 870 --------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 941 (1082)
...++||||++|.+|.++.. .+. ....+++.++..+|+. +++|||++|+||+++.++ +
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-E
Confidence 35899999999999988732 222 2456999999999999 999999999999999988 9
Q ss_pred EEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHH
Q 045553 942 YLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELI 997 (1082)
Q Consensus 942 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ell 997 (1082)
+++|||........... ..+.....+..++|+|+||+.+..+.
T Consensus 174 ~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99999988755322111 11333445667899999999876553
No 430
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.79 E-value=4e-19 Score=215.34 Aligned_cols=246 Identities=26% Similarity=0.413 Sum_probs=196.2
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSL 189 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (1082)
.+...|+|++++++ .+|..+. ++|+.|+|++|.|+ .+|..+. ++|++|++++|+++ .+|..+. ++|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 46789999999998 6787664 58999999999999 6787664 58999999999998 5676553 47999999
Q ss_pred ccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcc
Q 045553 190 SFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSG 269 (1082)
Q Consensus 190 ~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 269 (1082)
++|++. .+|..+. .+|+.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|++++|+++.
T Consensus 249 s~N~L~-~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~ 318 (754)
T PRK15370 249 SINRIT-ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTA 318 (754)
T ss_pred cCCccC-cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCcccc
Confidence 999998 8888765 47999999999999 6777665 58999999999998 4665543 579999999999984
Q ss_pred cCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccc
Q 045553 270 IVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWE 349 (1082)
Q Consensus 270 ~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~ 349 (1082)
+|..+. ++|+.|++++|.+. .+|..+. ++|+.|++++|++.. +|..+.
T Consensus 319 -LP~~l~--~sL~~L~Ls~N~Lt--------------------------~LP~~l~--~sL~~L~Ls~N~L~~-LP~~lp 366 (754)
T PRK15370 319 -LPETLP--PGLKTLEAGENALT--------------------------SLPASLP--PELQVLDVSKNQITV-LPETLP 366 (754)
T ss_pred -CCcccc--ccceeccccCCccc--------------------------cCChhhc--CcccEEECCCCCCCc-CChhhc
Confidence 565443 68999999886443 2444443 689999999999985 454443
Q ss_pred cccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-----ccCcccEEEecCCcce
Q 045553 350 LCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-----SVPCMAVFNVSQNLLS 412 (1082)
Q Consensus 350 ~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~l~~L~~L~l~~N~l~ 412 (1082)
++|++|+|++|+++ .+|..+. ..|+.|++++|+|++. |..+ .++.+..|++.+|+++
T Consensus 367 --~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~~L-P~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 367 --PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLVRL-PESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred --CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcccC-chhHHHHhhcCCCccEEEeeCCCcc
Confidence 68999999999999 6677654 3699999999999854 4322 2478899999999986
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=4.5e-19 Score=182.20 Aligned_cols=140 Identities=18% Similarity=0.227 Sum_probs=109.0
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEeecCccc--c-------H-----------------HHHHHHHHHHhccCCCce
Q 045553 806 QNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ--G-------V-----------------QQFAAEIRTLGRVQHPNL 859 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~e~~~l~~l~h~ni 859 (1082)
...||+|+||.||+|...+|+.||||+++..... . . .....|++.++++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999998778999999999754221 1 0 122359999999988776
Q ss_pred eeEeeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEeccCCCCCEEEcCC
Q 045553 860 VTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYL-HDECVPRVLHRDIKPSNILLDNN 938 (1082)
Q Consensus 860 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlk~~Nill~~~ 938 (1082)
.....+.. ...++||||++++++...... ...+++.++..++.|++.++.|+ |+. +|+||||||+||+++ +
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-C
Confidence 43333222 234899999988777654322 24688999999999999999999 688 999999999999998 4
Q ss_pred CcEEEeecccceecC
Q 045553 939 LNAYLSDFGLARLLG 953 (1082)
Q Consensus 939 ~~~kl~DfGla~~~~ 953 (1082)
+.++++|||+|....
T Consensus 154 ~~v~LiDFG~a~~~~ 168 (190)
T cd05147 154 GKLYIIDVSQSVEHD 168 (190)
T ss_pred CcEEEEEccccccCC
Confidence 789999999997653
No 432
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.76 E-value=5.2e-18 Score=175.31 Aligned_cols=139 Identities=19% Similarity=0.248 Sum_probs=110.8
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEeecCccc--c------------------------HHHHHHHHHHHhccCCCce
Q 045553 806 QNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ--G------------------------VQQFAAEIRTLGRVQHPNL 859 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~e~~~l~~l~h~ni 859 (1082)
...||+|+||.||+|...+|+.||||++...... . ...+..|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999998778999999998754211 0 1223578999999999987
Q ss_pred eeEeeeeccCCeEEEEEeecCCCCHHHH-HhhCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCEEEcC
Q 045553 860 VTLIGYHVSEAEMFLIYNYLPGGNLEKF-IQDRPRRTVEWSMLHKIALDVARALAYLHD-ECVPRVLHRDIKPSNILLDN 937 (1082)
Q Consensus 860 v~l~~~~~~~~~~~lV~E~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~ 937 (1082)
.....+... ..++||||++++++... +.. ..++......++.|++.++.++|+ . +|+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-
Confidence 544443322 24899999988755433 332 357788999999999999999999 8 999999999999999
Q ss_pred CCcEEEeecccceecC
Q 045553 938 NLNAYLSDFGLARLLG 953 (1082)
Q Consensus 938 ~~~~kl~DfGla~~~~ 953 (1082)
++.++|+|||++....
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 8899999999998764
No 433
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=9.5e-18 Score=169.32 Aligned_cols=185 Identities=18% Similarity=0.113 Sum_probs=140.7
Q ss_pred cccceecccCceEEEEEEEcCCeEEEEEEeecCccc----cHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEEEee
Q 045553 804 NVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ----GVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 804 ~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
.+...|++|+||+||.+.- .+.+++.+.+...... ....+.+|++++++++ |+++++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999998865 5788887777654321 1225789999999995 4789999886 457999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccC-CCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDI-KPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-k~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
++|.+|.+.... ....++.|+++++.++|+. +|+|||| ||+||+++.++.++|+|||+|........
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999998754321 1135778999999999999 9999999 79999999999999999999986554331
Q ss_pred c----c--------ccCcccCCCcccchhcccC-CCC-chhhHHHHHHHHHHHHhCCCCCCC
Q 045553 958 H----A--------TTDVAGTFGYVAPEYAMTC-RVS-DKADVYSFGVVLLELISDKKALDP 1005 (1082)
Q Consensus 958 ~----~--------~~~~~gt~~y~aPE~~~~~-~~~-~~~Dv~slGvll~elltg~~p~~~ 1005 (1082)
. . ..-...++.|++|+...-- ..+ ...+.++-|+.+|.++||+.+...
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0 0112357788888865432 233 567888999999999999998754
No 434
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.75 E-value=3.3e-18 Score=193.54 Aligned_cols=217 Identities=27% Similarity=0.435 Sum_probs=166.9
Q ss_pred HhccCCCceeeEeeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe-EeccCC
Q 045553 851 LGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRV-LHRDIK 929 (1082)
Q Consensus 851 l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i-vH~Dlk 929 (1082)
++.+.|.|+.+++|.+.++...+.|.+|+..|+|.+.+... ...++|.....+.++++.||+|+|.. +| .|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeec
Confidence 35689999999999999999999999999999999999874 56789999999999999999999998 55 899999
Q ss_pred CCCEEEcCCCcEEEeecccceecCC-CCCccccCcccCCCcccchhcccCC-------CCchhhHHHHHHHHHHHHhCCC
Q 045553 930 PSNILLDNNLNAYLSDFGLARLLGT-SETHATTDVAGTFGYVAPEYAMTCR-------VSDKADVYSFGVVLLELISDKK 1001 (1082)
Q Consensus 930 ~~Nill~~~~~~kl~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~Dv~slGvll~elltg~~ 1001 (1082)
+.|+++|..+.+|++|||+...... ..........-...|.|||.+.+.. .+.+.||||||++++|+++.+.
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 9999999999999999999887642 1111122223456799999987631 4677999999999999999999
Q ss_pred CCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1002 ALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1002 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
||+........ ..+...++. .+ ...+-+.+.... +....+..++.+||..+|++||++.+|-..++.+..
T Consensus 157 ~~~~~~~~~~~-~eii~~~~~---~~--~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 157 PFDLRNLVEDP-DEIILRVKK---GG--SNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred ccccccccCCh-HHHHHHHHh---cC--CCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 99865444222 222222222 11 111222222111 333479999999999999999999999988877654
No 435
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=2e-17 Score=176.35 Aligned_cols=231 Identities=19% Similarity=0.247 Sum_probs=150.3
Q ss_pred ccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCC----------CceeeEeee---
Q 045553 803 FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQH----------PNLVTLIGY--- 865 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h----------~niv~l~~~--- 865 (1082)
+...+.||.|+++.||.++.. +++.+|||++..... ...+++.+|.-....+.+ -.++-.++.
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 345678999999999999765 489999999865432 345667777655555432 111111111
Q ss_pred ------ec---cCC-----eEEEEEeecCCCCHHHHHhh---CCC--CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEec
Q 045553 866 ------HV---SEA-----EMFLIYNYLPGGNLEKFIQD---RPR--RTVEWSMLHKIALDVARALAYLHDECVPRVLHR 926 (1082)
Q Consensus 866 ------~~---~~~-----~~~lV~E~~~~gsL~~~l~~---~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 926 (1082)
+. +.. ..+++|+-+ .++|.+++.. ... ..+....+..+..|+++.+++||+. |++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 11 111 247788888 5788888652 211 2234445667778999999999999 99999
Q ss_pred cCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcccCCCcccchhccc--------CCCCchhhHHHHHHHHHHHHh
Q 045553 927 DIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMT--------CRVSDKADVYSFGVVLLELIS 998 (1082)
Q Consensus 927 Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slGvll~ellt 998 (1082)
||+|+|++++++|.++++||+.....+..... ...+..|.+||.... -.++.+.|.|++|+++|.|++
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 99999999999999999999988775432221 234578999997743 257889999999999999999
Q ss_pred CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCC
Q 045553 999 DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSR 1064 (1082)
Q Consensus 999 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~R 1064 (1082)
|..||+......... ..+. .+. +.++.+..||..+++.+|++|
T Consensus 246 ~~lPf~~~~~~~~~~---------------------~~f~-~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPE---------------------WDFS-RCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSG---------------------GGGT-TSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCcccccc---------------------ccch-hcC-CcCHHHHHHHHHHccCCcccC
Confidence 999998543221110 0222 233 778899999999999999988
No 436
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.74 E-value=1.5e-18 Score=203.76 Aligned_cols=253 Identities=22% Similarity=0.270 Sum_probs=185.6
Q ss_pred CccccceecccCceEEEEEEEcCCeEEEEEEeecCc-cccHHHHH---HHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGR-FQGVQQFA---AEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~-~~~~~~~~---~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
+|...+.||.+.|=+|.+|+...|. |+||++-... ....+.|. +|++ ...++|||.+++...-..++..|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5677789999999999999888776 8999986654 33344444 4444 556699999999998888888899999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee--cCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL--LGTS 955 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~--~~~~ 955 (1082)
|+ .-+|++.+..++ -+...+.+-|+.|++.|+.-.|.. +|+|||||.+|||++.=.=+.|+||..-+- +..+
T Consensus 102 yv-khnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YV-KHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HH-hhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 99 459999998754 466677778999999999999999 999999999999999887889999976542 2222
Q ss_pred CCccc----cCcccCCCcccchhcccC-----------CCCchhhHHHHHHHHHHHHhC-CCCCCCCccCCCCCccHHHH
Q 045553 956 ETHAT----TDVAGTFGYVAPEYAMTC-----------RVSDKADVYSFGVVLLELISD-KKALDPSFCSFGNGFNIVAW 1019 (1082)
Q Consensus 956 ~~~~~----~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slGvll~elltg-~~p~~~~~~~~~~~~~~~~~ 1019 (1082)
+.... .+...-.+|.|||.+... ..+++.||||+||++.|+++. +++|. +.+.
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~-----------LSQL 244 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT-----------LSQL 244 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc-----------HHHH
Confidence 22211 112233479999987531 156789999999999999885 66664 2333
Q ss_pred HHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1020 ASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1020 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
.+..-.+....+.+-..+. ...+.+++..|++.||++|-++.+.++.-+++..|
T Consensus 245 ~aYr~~~~~~~e~~Le~Ie-------d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP 298 (1431)
T KOG1240|consen 245 LAYRSGNADDPEQLLEKIE-------DVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFP 298 (1431)
T ss_pred HhHhccCccCHHHHHHhCc-------CccHHHHHHHHHccCchhccCHHHHHHhhhccccH
Confidence 3322221111111111121 13688999999999999999999999998876654
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=6.3e-20 Score=171.48 Aligned_cols=166 Identities=31% Similarity=0.553 Sum_probs=151.2
Q ss_pred ccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCc
Q 045553 106 IGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQ 185 (1082)
Q Consensus 106 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 185 (1082)
+.++++.+.|.|++|+++ .+|..+..+.+|+.|++++|+|+ .+|.+++.+++|+.|+++-|++. ..|..|+.+|.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 667888999999999999 88889999999999999999999 89999999999999999999998 8999999999999
Q ss_pred EEEcccCcccc-cCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCC
Q 045553 186 VVSLSFNLLSG-SVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSR 264 (1082)
Q Consensus 186 ~L~L~~N~l~~-~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 264 (1082)
.|||.+|.+.. .+|..|+ .+..|+.|+|++|.+. .+|..++++++|+.|.+..|.+- .+|.+++.++.|++|.+.+
T Consensus 106 vldltynnl~e~~lpgnff-~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFF-YMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhccccccccccCCcchh-HHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccc
Confidence 99999999874 5677777 5889999999999999 88999999999999999999998 7999999999999999999
Q ss_pred CcCcccCCccccCC
Q 045553 265 NFLSGIVPSELGMC 278 (1082)
Q Consensus 265 N~l~~~~p~~l~~l 278 (1082)
|+++ .+|..++.+
T Consensus 183 nrl~-vlppel~~l 195 (264)
T KOG0617|consen 183 NRLT-VLPPELANL 195 (264)
T ss_pred ceee-ecChhhhhh
Confidence 9998 677766554
No 438
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.73 E-value=1.2e-17 Score=175.97 Aligned_cols=196 Identities=21% Similarity=0.262 Sum_probs=141.0
Q ss_pred CCCceeeEeeeecc---------------------------CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHH
Q 045553 855 QHPNLVTLIGYHVS---------------------------EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALD 907 (1082)
Q Consensus 855 ~h~niv~l~~~~~~---------------------------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 907 (1082)
+|||||++.++|.+ ....|+||..+ ..+|.+|+..+ ..+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~---~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR---HRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC---CCchHHHHHHHHH
Confidence 59999999887653 23479999988 56999999864 3555667778999
Q ss_pred HHHHHHHHhhCCCCCeEeccCCCCCEEEc--CCC--cEEEeecccceecCC-----CCCccccCcccCCCcccchhcccC
Q 045553 908 VARALAYLHDECVPRVLHRDIKPSNILLD--NNL--NAYLSDFGLARLLGT-----SETHATTDVAGTFGYVAPEYAMTC 978 (1082)
Q Consensus 908 i~~~L~~LH~~~~~~ivH~Dlk~~Nill~--~~~--~~kl~DfGla~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~~ 978 (1082)
+++|+.|||.+ +|.|||+|++|||+. +|+ ...|+|||.+---.. +.........|...-||||+....
T Consensus 350 lLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 99999999999 999999999999994 443 578999998753221 111122345678889999998753
Q ss_pred C------CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHH
Q 045553 979 R------VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNL 1052 (1082)
Q Consensus 979 ~------~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l 1052 (1082)
. --.|+|.|+.|.+.||+++...||+..- +..+ +. ...++.+++ ..|+..+..+.++
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG-----em~L-~~--r~Yqe~qLP---------alp~~vpp~~rql 489 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG-----EMLL-DT--RTYQESQLP---------ALPSRVPPVARQL 489 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccc-----hhee-ch--hhhhhhhCC---------CCcccCChHHHHH
Confidence 3 2358999999999999999999997410 0000 00 001222222 1344556789999
Q ss_pred HHHcccCCCCCCCCHHHHHHHH
Q 045553 1053 AIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1053 i~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
+...++.||.+||+..-....|
T Consensus 490 V~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHHhcCCccccCCccHHHhHH
Confidence 9999999999999875544443
No 439
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=3.1e-19 Score=201.78 Aligned_cols=267 Identities=22% Similarity=0.192 Sum_probs=138.1
Q ss_pred cccccCCCCCCEEEcccCCCcc----cCChhhcCCCCCCEEeCcCCCCCC------CCCccccCCCCCCeEEccCccccc
Q 045553 103 SRAIGDLTQLRVLLLAFNGFSG----ELPLEIGQLSLLEILDLSFNSFHG------PIPPTLQNCSSLRLINLSGNQFNG 172 (1082)
Q Consensus 103 ~~~l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~------~~p~~l~~l~~L~~L~Ls~N~l~~ 172 (1082)
...+..+.+|+.|+++++.++. .++..+...++|++|+++++.+.+ .++..+.++++|++|++++|.+.+
T Consensus 16 ~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~ 95 (319)
T cd00116 16 TELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGP 95 (319)
T ss_pred HHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCCh
Confidence 3444445555555555555532 133344445555555555555441 122334445555555555555543
Q ss_pred ccCccccCCCC---CcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCC-CCccEEEccCCcCCCC--
Q 045553 173 TIPAFFGQSPG---FQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNC-TELRSLLLSSNMLQGD-- 246 (1082)
Q Consensus 173 ~~p~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~-- 246 (1082)
..+..+..+.+ |++|++++|++.+... ..+...+..+ ++|+.|++++|.+++.
T Consensus 96 ~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~---------------------~~l~~~l~~~~~~L~~L~L~~n~l~~~~~ 154 (319)
T cd00116 96 DGCGVLESLLRSSSLQELKLNNNGLGDRGL---------------------RLLAKGLKDLPPALEKLVLGRNRLEGASC 154 (319)
T ss_pred hHHHHHHHHhccCcccEEEeeCCccchHHH---------------------HHHHHHHHhCCCCceEEEcCCCcCCchHH
Confidence 33333333332 5555555554441110 1112223334 5555566665555521
Q ss_pred --cCccccCCCCCCEEeCCCCcCccc----CCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCC
Q 045553 247 --IPSSFGQLVNLEVLDLSRNFLSGI----VPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGL 320 (1082)
Q Consensus 247 --~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~ 320 (1082)
++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+... -...+
T Consensus 155 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~---------------------~~~~l 213 (319)
T cd00116 155 EALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDE---------------------GASAL 213 (319)
T ss_pred HHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChH---------------------HHHHH
Confidence 223344455566666666665531 223344445666666655432100 00112
Q ss_pred CccccCCCCCcEEEcCCCcccCCCCccccc-----ccCCCeEEcCCccccC----CCCccccCCCCCCEEecCCCcCccc
Q 045553 321 PDSITRLPNLRVFWAPNLNLEGIFPQNWEL-----CSKLEMLNLAHNFFTG----QIPASLGNCKSLYFLDLSSNNLTGL 391 (1082)
Q Consensus 321 p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~-----l~~L~~L~Ls~N~i~~----~~p~~~~~l~~L~~L~Ls~N~l~~~ 391 (1082)
+..+..+++|++|++++|.+.+.....+.. .+.|++|++++|.++. .+...+..+++|+++++++|+++..
T Consensus 214 ~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 214 AETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 334556677777777777776533333322 3688888888888862 2344556668888899999888855
Q ss_pred ----CCCCcc-c-CcccEEEecCCcc
Q 045553 392 ----LPEEVS-V-PCMAVFNVSQNLL 411 (1082)
Q Consensus 392 ----~p~~~~-l-~~L~~L~l~~N~l 411 (1082)
....+. . +.|+.+++.+|++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 294 GAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHHHHHHhhcCCchhhcccCCCCC
Confidence 333332 2 5788888887764
No 440
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=6.9e-17 Score=195.13 Aligned_cols=246 Identities=18% Similarity=0.251 Sum_probs=182.9
Q ss_pred HhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccC---CCceeeEeeeeccCCeEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ---HPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lV 875 (1082)
....|.|.+.||+|+||+||+|...+|+.||+|+-+..... +|.--.+++.+++ -+-|..+..++...+.-++|
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 34568899999999999999998888999999997665433 2333334455555 23455556666677888999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc-------CCCcEEEeeccc
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD-------NNLNAYLSDFGL 948 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-------~~~~~kl~DfGl 948 (1082)
+||.+.|+|.+++.. .+.++|.-+..+..|+++.+++||.. +||||||||+|+||. ....++|+|||-
T Consensus 773 ~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 773 SEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred eeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 999999999999984 56799999999999999999999999 999999999999994 234689999999
Q ss_pred ceecCC-CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 949 ARLLGT-SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 949 a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
+-.+.- .+.......++|..+--+|+..|+.++..+|.|.++.+++-|+.|+.. + ..+
T Consensus 848 siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~------------------q---~~~ 906 (974)
T KOG1166|consen 848 SIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM------------------E---VKN 906 (974)
T ss_pred ceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH------------------H---hcC
Confidence 976642 222345567899999999999999999999999999999999999642 1 111
Q ss_pred CCccccccccCCCCChHHH-HHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1028 RPCEFFTAGLWDCGPHDDL-IEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~-~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
.....++..+. +... .-..++..++++.|-..=|...++...|++.
T Consensus 907 g~~~~~~~~~~----Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~ 953 (974)
T KOG1166|consen 907 GSSWMVKTNFP----RYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEV 953 (974)
T ss_pred Ccceeccccch----hhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHH
Confidence 11112222211 1111 1234556666665555567777777777654
No 441
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.69 E-value=6.3e-18 Score=190.34 Aligned_cols=224 Identities=25% Similarity=0.284 Sum_probs=178.4
Q ss_pred ecccCceEEEEEE----EcCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEEEeecCC
Q 045553 809 IGSGGFGATYKAE----IIPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 809 lg~G~~g~Vy~a~----~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+|+|+||.|+.++ ...|..+|+|+.+.... ........|-.++...+ ||.++++...+..+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6899999999873 23467788888765422 11124456777888887 99999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
|.+...+.. ...+++.....+...++-+++++|+. +|+|||+|++||+++.+|.+++.|||+++..-..+..
T Consensus 82 g~lft~l~~--~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~--- 153 (612)
T KOG0603|consen 82 GDLFTRLSK--EVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA--- 153 (612)
T ss_pred chhhhcccc--CCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc---
Confidence 999887766 44677777888889999999999999 9999999999999999999999999999876433322
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
+||..|||||++. ......|.||||++++||++|..||.. +.+..+.... -..
T Consensus 154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------~~~~~Il~~~-----------~~~ 206 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------DTMKRILKAE-----------LEM 206 (612)
T ss_pred --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------HHHHHHhhhc-----------cCC
Confidence 8999999999998 567789999999999999999999863 2223322211 124
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSM 1067 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~ 1067 (1082)
|.+....+..++..+...+|..|--.
T Consensus 207 p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 207 PRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred chhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 56667778888888888888888633
No 442
>PRK10345 hypothetical protein; Provisional
Probab=99.69 E-value=2.1e-16 Score=163.60 Aligned_cols=135 Identities=18% Similarity=0.224 Sum_probs=106.3
Q ss_pred ccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhcc-----CCCceeeEeeeeccCC---e-EEEE
Q 045553 805 VQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-----QHPNLVTLIGYHVSEA---E-MFLI 875 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~-~~lV 875 (1082)
-.+.||+|+||.||. ...++.. +||++........+.+.+|+++++.+ .||||+++++++.++. . +.+|
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 357899999999996 3233444 79988765445567899999999999 5799999999998763 3 3478
Q ss_pred Eee--cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHH-HHHhhCCCCCeEeccCCCCCEEEcC----CCcEEEeeccc
Q 045553 876 YNY--LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARAL-AYLHDECVPRVLHRDIKPSNILLDN----NLNAYLSDFGL 948 (1082)
Q Consensus 876 ~E~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivH~Dlk~~Nill~~----~~~~kl~DfGl 948 (1082)
+|| +++++|.+++... .+++. ..++.+++.++ +|||++ +|+||||||+||+++. +..++|+||+-
T Consensus 84 ~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred ecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 999 5579999999753 35555 35677888777 999999 9999999999999974 34799999543
Q ss_pred c
Q 045553 949 A 949 (1082)
Q Consensus 949 a 949 (1082)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 3
No 443
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.68 E-value=2.5e-18 Score=194.43 Aligned_cols=244 Identities=22% Similarity=0.218 Sum_probs=162.2
Q ss_pred cccccccCCCCCCEEEcccCCCcc------cCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCC---CCeEEccCcccc
Q 045553 101 NLSRAIGDLTQLRVLLLAFNGFSG------ELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSS---LRLINLSGNQFN 171 (1082)
Q Consensus 101 ~l~~~l~~l~~L~~L~L~~n~l~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~---L~~L~Ls~N~l~ 171 (1082)
.+++.+...+.|++|+++++.+.+ .++..+..+++|+.|+|++|.+.+..+..+..+.+ |++|++++|+++
T Consensus 42 ~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~ 121 (319)
T cd00116 42 ALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLG 121 (319)
T ss_pred HHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccc
Confidence 467778899999999999998872 34567888999999999999998777777766666 999999999998
Q ss_pred c----ccCccccCC-CCCcEEEcccCcccccCCcccc---cccccccEEEcccCccCCC----CCccccCCCCccEEEcc
Q 045553 172 G----TIPAFFGQS-PGFQVVSLSFNLLSGSVPEEFG---DNCVSLEHILLAANSLTGS----IPPSLGNCTELRSLLLS 239 (1082)
Q Consensus 172 ~----~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~---~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~ 239 (1082)
+ .+...+..+ ++|+.|+|++|.+++.....+. ..+.+|++|++++|.+++. ++..+..+++|++|+++
T Consensus 122 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~ 201 (319)
T cd00116 122 DRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLN 201 (319)
T ss_pred hHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEecc
Confidence 4 233456667 8999999999998843332221 2345677777777777742 22334455677777777
Q ss_pred CCcCCCC----cCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccc
Q 045553 240 SNMLQGD----IPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNF 315 (1082)
Q Consensus 240 ~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~ 315 (1082)
+|.+++. +...+..+++|++|++++|.+++.....+...
T Consensus 202 ~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~------------------------------------- 244 (319)
T cd00116 202 NNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASA------------------------------------- 244 (319)
T ss_pred CCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHH-------------------------------------
Confidence 7777633 23345556677777777777664222221110
Q ss_pred cCCCCCccccCCCCCcEEEcCCCcccC----CCCcccccccCCCeEEcCCccccCC----CCccccCC-CCCCEEecCCC
Q 045553 316 FDGGLPDSITRLPNLRVFWAPNLNLEG----IFPQNWELCSKLEMLNLAHNFFTGQ----IPASLGNC-KSLYFLDLSSN 386 (1082)
Q Consensus 316 ~~~~~p~~l~~l~~L~~L~l~~n~l~~----~~~~~l~~l~~L~~L~Ls~N~i~~~----~p~~~~~l-~~L~~L~Ls~N 386 (1082)
+ ....++|+.|++++|.++. .....+..+++|++|++++|.++.. ....+... +.|++|++.+|
T Consensus 245 ----~---~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (319)
T cd00116 245 ----L---LSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDD 317 (319)
T ss_pred ----H---hccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCC
Confidence 0 0023456666666666652 1223455567788888888888744 33344444 67888888887
Q ss_pred cC
Q 045553 387 NL 388 (1082)
Q Consensus 387 ~l 388 (1082)
++
T Consensus 318 ~~ 319 (319)
T cd00116 318 SF 319 (319)
T ss_pred CC
Confidence 64
No 444
>smart00090 RIO RIO-like kinase.
Probab=99.67 E-value=3.5e-16 Score=166.42 Aligned_cols=142 Identities=20% Similarity=0.210 Sum_probs=112.4
Q ss_pred CccccceecccCceEEEEEE--EcCCeEEEEEEeecCccc------------------------cHHHHHHHHHHHhccC
Q 045553 802 GFNVQNCIGSGGFGATYKAE--IIPGVVVAVKRLSVGRFQ------------------------GVQQFAAEIRTLGRVQ 855 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~ 855 (1082)
.|++.+.||+|+||.||+|. ..+|+.||+|++...... ....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48889999999999999997 568999999998754210 0123568999999997
Q ss_pred CC--ceeeEeeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-eEeccCCCCC
Q 045553 856 HP--NLVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPR-VLHRDIKPSN 932 (1082)
Q Consensus 856 h~--niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlk~~N 932 (1082)
+. .+.+++++ ...++||||+++.++..+.... ......+...++.|++.++++||+. + |+||||||+|
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~N 179 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYN 179 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhh
Confidence 63 34445543 2358999999998887665332 2455666789999999999999999 9 9999999999
Q ss_pred EEEcCCCcEEEeecccceecC
Q 045553 933 ILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 933 ill~~~~~~kl~DfGla~~~~ 953 (1082)
|+++ ++.++++|||.+...+
T Consensus 180 Ili~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEEE-CCCEEEEEChhhhccC
Confidence 9999 8899999999987643
No 445
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.67 E-value=2.6e-18 Score=160.72 Aligned_cols=173 Identities=25% Similarity=0.429 Sum_probs=152.1
Q ss_pred CceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEE
Q 045553 518 LDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLS 597 (1082)
Q Consensus 518 ~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 597 (1082)
..+..|-||+|+++ .+|..+.. +.+|+.|++++|+|+ ..|..++.+++|+.|+++-|++. ++|..|+.++.|+.||
T Consensus 33 s~ITrLtLSHNKl~-~vppnia~-l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 33 SNITRLTLSHNKLT-VVPPNIAE-LKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhcccCcee-ecCCcHHH-hhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 34457889999998 88888864 577999999999999 55778999999999999999998 8999999999999999
Q ss_pred cCCCcCCc-cCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccc
Q 045553 598 LSLNNFTG-AIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLS 676 (1082)
Q Consensus 598 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 676 (1082)
|++|++.. ..|+.|..+..|+.|+|+.|.+. .+|.+.+.+++|+.|.+..|.+- .+|.+++.++.|+.|.+.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 99999963 68999999999999999999999 88999999999999999999999 88999999999999999999999
Q ss_pred cCCCCCccc------ccccCCCCCCC
Q 045553 677 GSAPRNSLI------KCENVQGNPNL 696 (1082)
Q Consensus 677 ~~~p~~~~~------~~~~~~~Np~~ 696 (1082)
...|+-+.+ .....+.|||.
T Consensus 187 vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 187 VLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred ecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 777765433 33456788886
No 446
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.64 E-value=1.5e-15 Score=158.33 Aligned_cols=144 Identities=19% Similarity=0.211 Sum_probs=113.1
Q ss_pred HHHHHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccc----------------------cHHHHHHHHHHHh
Q 045553 795 NVVRATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ----------------------GVQQFAAEIRTLG 852 (1082)
Q Consensus 795 ~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~ 852 (1082)
++.+....|.+.+.||+|+||.||+|...+|+.||||++...... ....+..|+..+.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 344444458888999999999999998888999999987643210 1123567888898
Q ss_pred ccCCCc--eeeEeeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCC
Q 045553 853 RVQHPN--LVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKP 930 (1082)
Q Consensus 853 ~l~h~n--iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 930 (1082)
.+.|++ +++.++. ...++||||+++++|...... .....++.+++.++.++|+. +|+||||+|
T Consensus 89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p 153 (198)
T cd05144 89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH---GIIHGDLSE 153 (198)
T ss_pred HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCc
Confidence 888774 4444442 356899999999998765431 24567889999999999998 999999999
Q ss_pred CCEEEcCCCcEEEeecccceecC
Q 045553 931 SNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 931 ~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||++++++.++|+|||.+....
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred ccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999996543
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.63 E-value=1.7e-15 Score=160.13 Aligned_cols=134 Identities=22% Similarity=0.418 Sum_probs=113.9
Q ss_pred ceecccCceEEEEEEEcCCeEEEEEEeecCccc--------cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 807 NCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ--------GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+.||+|++|.||+|.. .|..|++|+....... ....+.+|++++..++|+++.....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 5788999986543221 124577899999999999988777777777788999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
++|++|.+++.... + .+..++.+++.+++++|+. +++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999987531 2 7889999999999999999 999999999999999 78999999999865
No 448
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.62 E-value=2.5e-15 Score=157.15 Aligned_cols=131 Identities=23% Similarity=0.417 Sum_probs=107.6
Q ss_pred eecccCceEEEEEEEcCCeEEEEEEeecCcc--------ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 808 CIGSGGFGATYKAEIIPGVVVAVKRLSVGRF--------QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 808 ~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.||+|+||.||+|.+ +|..|++|+...... ....++.+|+++++.++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 478899998654321 11355778999999999887665555555666779999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
+|++|.+++..... .++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+...
T Consensus 80 ~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGND---------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcHH---------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999998765310 7899999999999999 999999999999999 789999999998753
No 449
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.61 E-value=3.5e-16 Score=173.14 Aligned_cols=174 Identities=27% Similarity=0.407 Sum_probs=134.0
Q ss_pred eEEEEEeecCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccc
Q 045553 871 EMFLIYNYLPGGNLEKFIQDR-PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLA 949 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 949 (1082)
..|+.|+++...+|.+|+..+ .....++.....++.|++.|+.| + +.+|||+||.||+...+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 578999999999999999743 35678889999999999999999 5 8999999999999999999999999999
Q ss_pred eecCCCC-----CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHH
Q 045553 950 RLLGTSE-----THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASML 1023 (1082)
Q Consensus 950 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1023 (1082)
..+.... ...++...||..||+||.+.+..|+.|+||||+|++++|++. -..+++. .. ....
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er-----------~~-t~~d 471 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER-----------IA-TLTD 471 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-----------HH-hhhh
Confidence 8776554 234556789999999999999999999999999999999987 2222221 01 1112
Q ss_pred HhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045553 1024 LLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVA 1071 (1082)
Q Consensus 1024 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~ 1071 (1082)
++.+.++ +.....+| .-..+..+++.+.|.+||++.++.
T Consensus 472 ~r~g~ip----~~~~~d~p-----~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 472 IRDGIIP----PEFLQDYP-----EEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred hhcCCCC----hHHhhcCc-----HHHHHHHHhcCCCcccCchHHHHh
Confidence 2222222 12222233 234788999999999999665554
No 450
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.59 E-value=5.1e-15 Score=178.06 Aligned_cols=139 Identities=22% Similarity=0.324 Sum_probs=113.3
Q ss_pred HhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCc--c------ccHHHHHHHHHHHhccCCCceeeEeeeeccCC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGR--F------QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 870 (1082)
....|...+.||+|+||+||+|.+... .+++|+..... . ...+.+.+|+++++.++|++++....++....
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 344556789999999999999987644 44444432111 1 12356789999999999999998888877777
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
..++||||+++++|.+++. ....++.++++++.|||+. +++|||+||+||++ .++.++|+|||+++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 8899999999999999885 3467899999999999999 99999999999999 67799999999997
Q ss_pred ec
Q 045553 951 LL 952 (1082)
Q Consensus 951 ~~ 952 (1082)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 53
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.58 E-value=2.8e-15 Score=176.89 Aligned_cols=208 Identities=22% Similarity=0.290 Sum_probs=143.2
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..+|...+.|..|+||.||.++.+ +.+.+|+|+ .... -+.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~-----lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQN-----LILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-cccc-----hhhhc--cccccCCccee------------------
Confidence 457888999999999999999654 467788843 2211 01110 22222233322
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC-
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET- 957 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~- 957 (1082)
|+-...++..+ .++. +++.+++|+|+. +|+|||+||+|.+++.-|.+|++|||+++.......
T Consensus 136 ---gDc~tllk~~g--~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ---GDCATLLKNIG--PLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ---chhhhhcccCC--CCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 44444444322 2221 227889999999 999999999999999999999999999865422111
Q ss_pred -------------ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 958 -------------HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 958 -------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
.....++||+.|+|||++..+.|....|+|++|+++||++-|+.||..+. ..+.+...+
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt--------peelfg~vi 271 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT--------PEELFGQVI 271 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC--------HHHHHhhhh
Confidence 12335789999999999999999999999999999999999999997542 222333322
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCC
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRP 1065 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RP 1065 (1082)
.+. ..+.+..+....+++.++.+.++.+|.+|-
T Consensus 272 sd~--------i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 272 SDD--------IEWPEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhh--------ccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 221 111112233456788999999999999985
No 452
>PLN03150 hypothetical protein; Provisional
Probab=99.56 E-value=1.5e-14 Score=175.58 Aligned_cols=143 Identities=35% Similarity=0.614 Sum_probs=99.4
Q ss_pred HHHHHHHHhcccCCCCCCCCCCCCCCCCc----eeeeeEeeCC--CC--CeeeeecCCCccccccccCCCCCCCCCCCCc
Q 045553 2 NALLQLKSAITEDPLGLTSNWNPKDTDSC----SWHGVTCDPL--SG--RVTSLNLSSNLSRTSCSLLSLPPAAGPGGNF 73 (1082)
Q Consensus 2 ~~l~~~k~~~~~~~~~~~~~W~~~~~~~c----~w~gv~C~~~--~~--~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~ 73 (1082)
+||++||+++. +|.. .+|.. ..|| .|.||.|+.. .+ +|+.|+|++
T Consensus 375 ~aL~~~k~~~~-~~~~--~~W~g--~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~---------------------- 427 (623)
T PLN03150 375 SALQTLKSSLG-LPLR--FGWNG--DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDN---------------------- 427 (623)
T ss_pred HHHHHHHHhcC-Cccc--CCCCC--CCCCCcccccccceeeccCCCCceEEEEEECCC----------------------
Confidence 69999999996 4432 48963 2232 7999999532 22 466666654
Q ss_pred ccCcCcccccccccCcccCCCCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCcc
Q 045553 74 SFHFPCLQLHQHDRGNINSNSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPT 153 (1082)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 153 (1082)
+.+.|.+|++|+.+++|+.|+|++|.++|.+|..++.+++|+.|+|++|++++.+|..
T Consensus 428 ----------------------n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~ 485 (623)
T PLN03150 428 ----------------------QGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPES 485 (623)
T ss_pred ----------------------CCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchH
Confidence 4566777777777777777777777777777777777777777777777777777777
Q ss_pred ccCCCCCCeEEccCcccccccCccccCC-CCCcEEEcccCc
Q 045553 154 LQNCSSLRLINLSGNQFNGTIPAFFGQS-PGFQVVSLSFNL 193 (1082)
Q Consensus 154 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~ 193 (1082)
++++++|++|+|++|++++.+|..+..+ .++..+++.+|.
T Consensus 486 l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 486 LGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred HhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCc
Confidence 7777777777777777777777666543 344555555554
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.51 E-value=6.9e-14 Score=144.66 Aligned_cols=136 Identities=22% Similarity=0.283 Sum_probs=97.8
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEeecCccc--cHHHH----------------------HHHHHHHhccCCCc--e
Q 045553 806 QNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ--GVQQF----------------------AAEIRTLGRVQHPN--L 859 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~--~~~~~----------------------~~e~~~l~~l~h~n--i 859 (1082)
.+.||+|+||+||+|...+++.||||++...... ....+ ..|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999998778999999998754221 11111 24555555554432 3
Q ss_pred eeEeeeeccCCeEEEEEeecCCCCHHH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCEEEcC
Q 045553 860 VTLIGYHVSEAEMFLIYNYLPGGNLEK-FIQDRPRRTVEWSMLHKIALDVARALAYLHD-ECVPRVLHRDIKPSNILLDN 937 (1082)
Q Consensus 860 v~l~~~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~ 937 (1082)
.+.+++ ...++||||++++.+.. .+.... .. .....++.+++.++.++|. . +|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-
Confidence 444443 24689999999854321 111110 11 5678899999999999999 7 999999999999999
Q ss_pred CCcEEEeecccceecC
Q 045553 938 NLNAYLSDFGLARLLG 953 (1082)
Q Consensus 938 ~~~~kl~DfGla~~~~ 953 (1082)
++.++++|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 8999999999997653
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.50 E-value=1.4e-13 Score=136.77 Aligned_cols=135 Identities=19% Similarity=0.174 Sum_probs=114.7
Q ss_pred ccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCC--CceeeEeeeeccCCeEEEEEeecCCC
Q 045553 805 VQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQH--PNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+..++.++| ..+++++++....+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35679999999999998754 7899999865433 4678899999999977 58999999888888999999999887
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 883 NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 883 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.+..+ +......++.+++++++++|.....+++|||++|+||++++.+.++++|||.++.
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77554 4566778899999999999997445799999999999999989999999998864
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.47 E-value=4.2e-13 Score=143.18 Aligned_cols=134 Identities=24% Similarity=0.328 Sum_probs=105.3
Q ss_pred ceec-ccCceEEEEEEEcCCeEEEEEEeecCc-------------cccHHHHHHHHHHHhccCCCce--eeEeeeeccC-
Q 045553 807 NCIG-SGGFGATYKAEIIPGVVVAVKRLSVGR-------------FQGVQQFAAEIRTLGRVQHPNL--VTLIGYHVSE- 869 (1082)
Q Consensus 807 ~~lg-~G~~g~Vy~a~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~- 869 (1082)
..|| .||.|+||+++.. +..++||.+.... ......+.+|++++.+++|+++ ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4687 8999999999775 7789999885321 1223567889999999998875 6677764432
Q ss_pred C---eEEEEEeecCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEee
Q 045553 870 A---EMFLIYNYLPG-GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSD 945 (1082)
Q Consensus 870 ~---~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 945 (1082)
. ..++||||+++ .+|.+++... .++.. .+.+++.++.+||+. +|+||||||.|||++.++.++|+|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23699999997 6999988653 34433 357899999999999 999999999999999999999999
Q ss_pred ccccee
Q 045553 946 FGLARL 951 (1082)
Q Consensus 946 fGla~~ 951 (1082)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 998875
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=1.1e-14 Score=173.92 Aligned_cols=253 Identities=26% Similarity=0.307 Sum_probs=190.5
Q ss_pred cCccccceecccCceEEEEEEEc--CCeEEEEEEeecCc--cccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII--PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV 875 (1082)
..|.+.+.||+|+|+.|-.+... ....+|+|.+.... .........|..+-+... |+|++.+++........+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 45777788999999999887543 34567777775543 233344555777777776 99999999999999999999
Q ss_pred EeecCCCCHHHHH-hhCCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEeccCCCCCEEEcCCC-cEEEeecccceec
Q 045553 876 YNYLPGGNLEKFI-QDRPRRTVEWSMLHKIALDVARALAYLH-DECVPRVLHRDIKPSNILLDNNL-NAYLSDFGLARLL 952 (1082)
Q Consensus 876 ~E~~~~gsL~~~l-~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~ 952 (1082)
.||..++++.+-+ +.. ....+......+..|+..++.|+| .. ++.|||+||+|.+++..+ ..+++|||+|..+
T Consensus 100 ~~~s~g~~~f~~i~~~~-~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPD-STGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cCcccccccccccccCC-ccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 9999999998888 432 225566677789999999999999 76 999999999999999999 9999999999987
Q ss_pred CC--CCCccccCccc-CCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 953 GT--SETHATTDVAG-TFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 953 ~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
.. .........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++..... ......|+.....
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~--- 249 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRK---DGRYSSWKSNKGR--- 249 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccc---cccceeecccccc---
Confidence 65 33344455678 9999999999884 4567899999999999999999998754322 2222333222100
Q ss_pred CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045553 1029 PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVA 1071 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~ 1071 (1082)
... ............+..+++..+|..|.+..++.
T Consensus 250 ----~~~----~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 250 ----FTQ----LPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ----ccc----CccccCChhhhhcccccccCCchhcccccccc
Confidence 000 11123344677788888889999999887764
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.41 E-value=8.5e-15 Score=161.64 Aligned_cols=179 Identities=35% Similarity=0.460 Sum_probs=157.0
Q ss_pred cCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcE
Q 045553 107 GDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQV 186 (1082)
Q Consensus 107 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 186 (1082)
-.|+.-...||+.|++. ++|..+..+-.|+.|.|..|.+. .+|..+.++..|++|||+.|+++ .+|..++.++ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 45666677889999998 89999988899999999999998 88999999999999999999998 7888888877 899
Q ss_pred EEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCc
Q 045553 187 VSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNF 266 (1082)
Q Consensus 187 L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 266 (1082)
|.+++|+++ .+|..++ .+..|..|+.+.|++. .+|..++++.+|+.|.+..|++. .+|..++.|+ |..||+|.|+
T Consensus 148 li~sNNkl~-~lp~~ig-~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNk 222 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIG-LLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNK 222 (722)
T ss_pred EEEecCccc-cCCcccc-cchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCc
Confidence 999999998 8999988 7889999999999999 78888999999999999999998 6888888654 8899999999
Q ss_pred CcccCCccccCCCCCcEEEeccccCCccc
Q 045553 267 LSGIVPSELGMCKQLKVLVLRNDYGPLYS 295 (1082)
Q Consensus 267 l~~~~p~~l~~l~~L~~L~l~~n~~~~~~ 295 (1082)
+. .+|-.|.+|+.|++|.|.+|++...+
T Consensus 223 is-~iPv~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 223 IS-YLPVDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred ee-ecchhhhhhhhheeeeeccCCCCCCh
Confidence 98 78999999999999999998776544
No 458
>PLN03150 hypothetical protein; Provisional
Probab=99.38 E-value=7.4e-13 Score=160.85 Aligned_cols=105 Identities=38% Similarity=0.632 Sum_probs=71.3
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccC
Q 045553 569 LRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDH 648 (1082)
Q Consensus 569 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 648 (1082)
++.|+|++|.++|.+|..+..+++|+.|+|++|+++|.+|..+..+++|+.|+|++|+++|.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 56677777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cccCCCCCCCCCCC-CcccEEeccCC
Q 045553 649 NNLTGRIPPGFGTR-SSLSIFDVSFN 673 (1082)
Q Consensus 649 N~l~~~~p~~~~~l-~~L~~l~ls~N 673 (1082)
|+++|.+|..+..+ .++..+++++|
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N 525 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDN 525 (623)
T ss_pred CcccccCChHHhhccccCceEEecCC
Confidence 77777777665442 23344444433
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.35 E-value=3.4e-14 Score=156.98 Aligned_cols=205 Identities=29% Similarity=0.375 Sum_probs=148.5
Q ss_pred cccCCCCCCEEEcccCCCcccCChh--hcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCC
Q 045553 105 AIGDLTQLRVLLLAFNGFSGELPLE--IGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSP 182 (1082)
Q Consensus 105 ~l~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 182 (1082)
++..-..=-.|.|++-++. ..|.. =..+..-...||+.|++. ++|..++.+..|+.|.|.+|.|. .+|..++++.
T Consensus 45 ~leeA~~sg~l~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~ 121 (722)
T KOG0532|consen 45 ALEEAEYSGRLLLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLE 121 (722)
T ss_pred HHHHHhhhcccccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhh
Confidence 3333333445666666665 44422 244566678999999999 89999999999999999999998 8899999999
Q ss_pred CCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeC
Q 045553 183 GFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDL 262 (1082)
Q Consensus 183 ~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 262 (1082)
.|+.|+|+.|+++ .+|..++ .--|+.|.+++|+++ .+|..++.+..|..||.+.|.+. .+|..++.+.+|+.|.+
T Consensus 122 ~lt~l~ls~NqlS-~lp~~lC--~lpLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~v 196 (722)
T KOG0532|consen 122 ALTFLDLSSNQLS-HLPDGLC--DLPLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNV 196 (722)
T ss_pred HHHHhhhccchhh-cCChhhh--cCcceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHH
Confidence 9999999999998 7777765 234777777777777 66666776667777777777776 56666666777777777
Q ss_pred CCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccC
Q 045553 263 SRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEG 342 (1082)
Q Consensus 263 s~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~ 342 (1082)
..|++. .+|..+.. |
T Consensus 197 rRn~l~-~lp~El~~-------------------------------------------------L--------------- 211 (722)
T KOG0532|consen 197 RRNHLE-DLPEELCS-------------------------------------------------L--------------- 211 (722)
T ss_pred hhhhhh-hCCHHHhC-------------------------------------------------C---------------
Confidence 766665 33332221 1
Q ss_pred CCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCC
Q 045553 343 IFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLP 393 (1082)
Q Consensus 343 ~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 393 (1082)
.|..||+|.|++. .+|-.|.+|+.|++|-|.+|+|+..+.
T Consensus 212 ----------pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 212 ----------PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred ----------ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCChH
Confidence 3677888888888 788888888888888888888875433
No 460
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.34 E-value=4.7e-12 Score=146.97 Aligned_cols=142 Identities=19% Similarity=0.231 Sum_probs=101.4
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEeecCccccH----------------------------------------HHHH
Q 045553 806 QNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGV----------------------------------------QQFA 845 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~ 845 (1082)
.+.||.|++|.||+|++.+|+.||||+.+....... -.|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999999999999999864321100 0234
Q ss_pred HHHHHHhccC----CCceeeEeeee-ccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHH-HHHHHhhCC
Q 045553 846 AEIRTLGRVQ----HPNLVTLIGYH-VSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVAR-ALAYLHDEC 919 (1082)
Q Consensus 846 ~e~~~l~~l~----h~niv~l~~~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~-~L~~LH~~~ 919 (1082)
+|.+.+.+++ |.+-+.+-..+ ......++||||++|++|.++..... ... .+.+++..++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~l~ql~~~- 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLARSFLNQVLRD- 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHHHHHHHhC-
Confidence 4555555552 33333333333 23456799999999999988875421 112 23456666666 46788988
Q ss_pred CCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 920 VPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 920 ~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
+++|+|++|.||+++.+++++++|||++..+..
T Consensus 277 --g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 277 --GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred --CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 999999999999999999999999999987653
No 461
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=3.3e-12 Score=132.48 Aligned_cols=205 Identities=20% Similarity=0.293 Sum_probs=142.1
Q ss_pred HHHHHhccCCCceeeEeeeeccC-----CeEEEEEeecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCC
Q 045553 847 EIRTLGRVQHPNLVTLIGYHVSE-----AEMFLIYNYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDEC 919 (1082)
Q Consensus 847 e~~~l~~l~h~niv~l~~~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~ 919 (1082)
-++.+-++-|.|||+++.|+.+. .+..++.|||..|++.++|+... ...+......+|+.||..||.|||+ |
T Consensus 117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~ 195 (458)
T KOG1266|consen 117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-C 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-c
Confidence 34556666799999999988754 35789999999999999998643 4567778888999999999999999 5
Q ss_pred CCCeEeccCCCCCEEEcCCCcEEEeecccceecCC----CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHH
Q 045553 920 VPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT----SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLE 995 (1082)
Q Consensus 920 ~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~e 995 (1082)
.|+|+|+++..+-|++..++-+||.--.-. .... ........-.+-++|.|||+-.....+-++|||+||+-..|
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred CCccccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 889999999999999999998887421111 1100 00011112246789999998888788889999999999999
Q ss_pred HHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 996 LISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 996 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
|--+..--...... ...+..... ..-.....+ =..++..|++..|..||+|++++.+.
T Consensus 275 mailEiq~tnseS~-----~~~ee~ia~-----~i~~len~l-----------qr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 275 MAILEIQSTNSESK-----VEVEENIAN-----VIIGLENGL-----------QRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HHHheeccCCCcce-----eehhhhhhh-----heeeccCcc-----------ccCcCcccccCCCCCCcchhhhhcCc
Confidence 98776432211111 111100000 000011111 12467889999999999999887553
No 462
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.27 E-value=1.5e-10 Score=132.39 Aligned_cols=168 Identities=15% Similarity=0.241 Sum_probs=131.9
Q ss_pred EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHH
Q 045553 821 EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSM 900 (1082)
Q Consensus 821 ~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~ 900 (1082)
+..++.+|.|+.++...........+-++.++.++||||++++.....++..|+|+|-+ ..|..++... ....
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l-----~~~~ 105 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKEL-----GKEE 105 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHh-----HHHH
Confidence 45568899999987765544566778899999999999999999999999999999998 4688888763 3556
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcccCCCcccchhcccCCC
Q 045553 901 LHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRV 980 (1082)
Q Consensus 901 ~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 980 (1082)
+...+.||+.||.|||+.| +++|+++.-..|++++.|+.||++|.++........ ......--..|..|+.+....
T Consensus 106 v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~- 181 (690)
T KOG1243|consen 106 VCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE- 181 (690)
T ss_pred HHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc-
Confidence 6677899999999999887 999999999999999999999999998865432211 111122233566777553322
Q ss_pred CchhhHHHHHHHHHHHHhCC
Q 045553 981 SDKADVYSFGVVLLELISDK 1000 (1082)
Q Consensus 981 ~~~~Dv~slGvll~elltg~ 1000 (1082)
-..|.|.||++++|++.|.
T Consensus 182 -~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 -WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred -cchhhhhHHHHHHHHhCcc
Confidence 3469999999999999993
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.27 E-value=4.1e-12 Score=147.95 Aligned_cols=168 Identities=32% Similarity=0.460 Sum_probs=80.0
Q ss_pred EEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCC-CCCeEEccCcccccccCccccCCCCCcEEEcccC
Q 045553 114 VLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCS-SLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFN 192 (1082)
Q Consensus 114 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (1082)
.|++..|.+. .....+..++.++.|++.+|.++ .+|.....++ +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 3444444443 12223333445555555555555 4444444442 5555555555555 33344445555555555555
Q ss_pred cccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCC
Q 045553 193 LLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVP 272 (1082)
Q Consensus 193 ~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 272 (1082)
+++ .+|...+ .++.|+.|++++|+++ .+|..+.....|++|.+++|.+. ..+..+..+.++..|.+.+|++. ..+
T Consensus 174 ~l~-~l~~~~~-~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~ 248 (394)
T COG4886 174 DLS-DLPKLLS-NLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLP 248 (394)
T ss_pred hhh-hhhhhhh-hhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-ecc
Confidence 555 4443322 2445555555555555 44444333444555555555332 24444555555555555555554 224
Q ss_pred ccccCCCCCcEEEeccc
Q 045553 273 SELGMCKQLKVLVLRND 289 (1082)
Q Consensus 273 ~~l~~l~~L~~L~l~~n 289 (1082)
..++.+++|+.|++++|
T Consensus 249 ~~~~~l~~l~~L~~s~n 265 (394)
T COG4886 249 ESIGNLSNLETLDLSNN 265 (394)
T ss_pred chhccccccceeccccc
Confidence 44555555555555554
No 464
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.26 E-value=7.7e-12 Score=145.63 Aligned_cols=144 Identities=32% Similarity=0.430 Sum_probs=63.8
Q ss_pred EEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCC-CCcEEEcccCcccccCCcccccccccccEEEccc
Q 045553 138 ILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSP-GFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAA 216 (1082)
Q Consensus 138 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~ 216 (1082)
.|+++.|.+. .....+..++.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..+. .+++|+.|++++
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~-~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLR-NLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhh-ccccccccccCC
Confidence 3444444443 12223334444555555555544 3344434442 4555555555544 3332222 344555555555
Q ss_pred CccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEecc
Q 045553 217 NSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRN 288 (1082)
Q Consensus 217 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~ 288 (1082)
|+++ .+|...+.+++|+.|++++|++. .+|.....+..|++|.+++|.+. ..+..+.+++++..|.+.+
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~ 241 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSN 241 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCC
Confidence 5555 33333334444555555555554 34443333344555555555322 2344444444444444443
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.22 E-value=3.6e-10 Score=132.39 Aligned_cols=143 Identities=15% Similarity=0.200 Sum_probs=94.0
Q ss_pred hcCccccceecccCceEEEEEEEcC-CeEEEEEEeecCccc------------------------------c----HH--
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP-GVVVAVKRLSVGRFQ------------------------------G----VQ-- 842 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~------------------------------~----~~-- 842 (1082)
...|+. +.||.|++|.||+|++.+ |+.||||+.+..... . .+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345666 789999999999999887 999999998644110 0 01
Q ss_pred ----HHHHHHHHHhccC----CCceeeEeeeecc-CCeEEEEEeecCCCCHHHHH--hhCCC--CCCCHHHHHHHHHHHH
Q 045553 843 ----QFAAEIRTLGRVQ----HPNLVTLIGYHVS-EAEMFLIYNYLPGGNLEKFI--QDRPR--RTVEWSMLHKIALDVA 909 (1082)
Q Consensus 843 ----~~~~e~~~l~~l~----h~niv~l~~~~~~-~~~~~lV~E~~~~gsL~~~l--~~~~~--~~l~~~~~~~i~~~i~ 909 (1082)
+|.+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.++- ...+. ..+....+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 1334444444442 3333443333332 45678999999999998753 22110 012222233333333
Q ss_pred HHHHHHhhCCCCCeEeccCCCCCEEEcCCC----cEEEeecccceecC
Q 045553 910 RALAYLHDECVPRVLHRDIKPSNILLDNNL----NAYLSDFGLARLLG 953 (1082)
Q Consensus 910 ~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DfGla~~~~ 953 (1082)
+.. +++|+|++|.||+++.++ +++++|||++..+.
T Consensus 277 ------f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ------FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ------HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 345 999999999999999988 99999999998653
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.18 E-value=3.1e-11 Score=137.14 Aligned_cols=247 Identities=20% Similarity=0.238 Sum_probs=182.0
Q ss_pred Cccccceecc--cCceEEEEEEE---cCCeEEEEEEeecCcc--ccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEE
Q 045553 802 GFNVQNCIGS--GGFGATYKAEI---IPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 802 ~~~~~~~lg~--G~~g~Vy~a~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 873 (1082)
.|.+.+.+|. |.+|.||.+.. .++..+|+|+-+.... .....=.+|+.....+ .|++.++....+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4566788999 99999999954 4688999998543322 2222234566665555 4999999888888899999
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHH----HHHHHhhCCCCCeEeccCCCCCEEEcCC-CcEEEeeccc
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVAR----ALAYLHDECVPRVLHRDIKPSNILLDNN-LNAYLSDFGL 948 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGl 948 (1082)
+-.|++ +.++.++.+.. ...++....+.+..+..+ |+.++|+. .++|-|+||.||++..+ ...+++|||+
T Consensus 195 iqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcce
Confidence 999988 68998888864 344777888888888888 99999999 99999999999999999 8899999999
Q ss_pred ceecCCCCCc----cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 949 ARLLGTSETH----ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 949 a~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
...++...-. ......|...|++||...+ .++.+.|+|++|.++.+-.++.+....... ..|...
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~--------~~W~~~-- 338 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN--------SSWSQL-- 338 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC--------CCcccc--
Confidence 9988765432 1223367889999998765 678899999999999999998876542210 112111
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
+++- +..++-.....++...+..+++.+|-.|++.+++..
T Consensus 339 r~~~--------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 339 RQGY--------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cccc--------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1110 000111122345566899999999999999887754
No 467
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=2.8e-12 Score=138.13 Aligned_cols=161 Identities=25% Similarity=0.157 Sum_probs=91.6
Q ss_pred cCCCCCCEEEcccCCCcccCC--hhhcCCCCCCEEeCcCCCCCCC--CCccccCCCCCCeEEccCcccccccCc-cccCC
Q 045553 107 GDLTQLRVLLLAFNGFSGELP--LEIGQLSLLEILDLSFNSFHGP--IPPTLQNCSSLRLINLSGNQFNGTIPA-FFGQS 181 (1082)
Q Consensus 107 ~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~Ls~n~l~~~--~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l 181 (1082)
+++.+|+...|.++... ..+ .....+++++.||||+|-+..- +-.....|++|+.|+|+.|++..-... .-..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 45666777777766655 333 2455667777777777766532 223345667777777777766532221 11245
Q ss_pred CCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcC--ccccCCCCCCE
Q 045553 182 PGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIP--SSFGQLVNLEV 259 (1082)
Q Consensus 182 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~ 259 (1082)
++|+.|.|+.|.++..--..+...+|+|+.|+|..|.....-.....-+..|+.|+|++|++.. .+ ...+.++.|+.
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhh
Confidence 6666777777766643333344456666666666664332333344445566666666666652 22 34556666666
Q ss_pred EeCCCCcCcc
Q 045553 260 LDLSRNFLSG 269 (1082)
Q Consensus 260 L~Ls~N~l~~ 269 (1082)
|+++.+.+..
T Consensus 276 Lnls~tgi~s 285 (505)
T KOG3207|consen 276 LNLSSTGIAS 285 (505)
T ss_pred hhccccCcch
Confidence 6666666653
No 468
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.13 E-value=1.3e-10 Score=118.13 Aligned_cols=130 Identities=20% Similarity=0.193 Sum_probs=96.7
Q ss_pred ceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCcee-eEeeeeccCCeEEEEEeecCCCCHH
Q 045553 807 NCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLV-TLIGYHVSEAEMFLIYNYLPGGNLE 885 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lV~E~~~~gsL~ 885 (1082)
+.++.|.++.||+++.. +..|++|....... ....+..|++.++.+.+.+++ +++.+.. ...++||||++|.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCccc
Confidence 56889999999999865 78899999764432 223467889999888665544 4554432 3458999999998875
Q ss_pred HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--CCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 886 KFIQDRPRRTVEWSMLHKIALDVARALAYLHDEC--VPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 886 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.. . .....++.+++++++.||+.. ..+++|||++|.||+++ ++.++++|||.+..
T Consensus 80 ~~--~--------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TE--D--------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc--c--------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 43 0 112345679999999999983 22369999999999999 66899999998853
No 469
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.13 E-value=3.2e-12 Score=134.37 Aligned_cols=255 Identities=24% Similarity=0.283 Sum_probs=155.2
Q ss_pred cccccccCCCCCCEEEcccCCCccc----CChhhcCCCCCCEEeCcCC---CCCCCCCc-------cccCCCCCCeEEcc
Q 045553 101 NLSRAIGDLTQLRVLLLAFNGFSGE----LPLEIGQLSLLEILDLSFN---SFHGPIPP-------TLQNCSSLRLINLS 166 (1082)
Q Consensus 101 ~l~~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~n---~l~~~~p~-------~l~~l~~L~~L~Ls 166 (1082)
.+-+.+..+..++.++|++|.|... +...+.+.++|+.-++|+- ++..++|+ .+...++|++||||
T Consensus 21 ~v~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLS 100 (382)
T KOG1909|consen 21 DVEEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLS 100 (382)
T ss_pred hHHHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecc
Confidence 3456677788888888888888743 4455677778888887753 22233443 34455677888888
Q ss_pred CcccccccCcc----ccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCc
Q 045553 167 GNQFNGTIPAF----FGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNM 242 (1082)
Q Consensus 167 ~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 242 (1082)
+|-|....+.. +.....|++|.|.+|.+.-.-...++. .|.+|. .| ...+.-++|+++..++|+
T Consensus 101 DNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~---al~~l~--~~-------kk~~~~~~Lrv~i~~rNr 168 (382)
T KOG1909|consen 101 DNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR---ALFELA--VN-------KKAASKPKLRVFICGRNR 168 (382)
T ss_pred ccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH---HHHHHH--HH-------hccCCCcceEEEEeeccc
Confidence 88776444433 334566666666666654111112221 122111 11 123344689999999999
Q ss_pred CCCC----cCccccCCCCCCEEeCCCCcCccc----CCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCccc
Q 045553 243 LQGD----IPSSFGQLVNLEVLDLSRNFLSGI----VPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYN 314 (1082)
Q Consensus 243 l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n 314 (1082)
+... +...|...+.|+.+.++.|.|... +...|..++.|++|+|++|.+..-
T Consensus 169 len~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~e-------------------- 228 (382)
T KOG1909|consen 169 LENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLE-------------------- 228 (382)
T ss_pred cccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhH--------------------
Confidence 8732 234567778899999999988532 234577888888888888543210
Q ss_pred ccCCCCCccccCCCCCcEEEcCCCcccCCCCccc-----ccccCCCeEEcCCccccCC----CCccccCCCCCCEEecCC
Q 045553 315 FFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNW-----ELCSKLEMLNLAHNFFTGQ----IPASLGNCKSLYFLDLSS 385 (1082)
Q Consensus 315 ~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l-----~~l~~L~~L~Ls~N~i~~~----~p~~~~~l~~L~~L~Ls~ 385 (1082)
-+..+...+..+++|+.|++++|.+......+| ...++|+.|.|.+|.|+.. +...+...+.|..|+|++
T Consensus 229 -gs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLng 307 (382)
T KOG1909|consen 229 -GSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNG 307 (382)
T ss_pred -HHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCc
Confidence 001234555666777777777777776554443 2356777777777776521 233344566677777777
Q ss_pred CcC
Q 045553 386 NNL 388 (1082)
Q Consensus 386 N~l 388 (1082)
|.+
T Consensus 308 N~l 310 (382)
T KOG1909|consen 308 NRL 310 (382)
T ss_pred ccc
Confidence 766
No 470
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.08 E-value=1.4e-09 Score=110.63 Aligned_cols=136 Identities=14% Similarity=0.185 Sum_probs=99.0
Q ss_pred ceecccCceEEEEEEEcC-------CeEEEEEEeecCcc----------------------ccHHHH----HHHHHHHhc
Q 045553 807 NCIGSGGFGATYKAEIIP-------GVVVAVKRLSVGRF----------------------QGVQQF----AAEIRTLGR 853 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~-------~~~vavK~~~~~~~----------------------~~~~~~----~~e~~~l~~ 853 (1082)
..||.|--+.||.|.-.+ +..+|||+++.... ...+.+ .+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999996442 47999998853210 011223 379999988
Q ss_pred cCC--CceeeEeeeeccCCeEEEEEeecCCCCHHH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEeccCC
Q 045553 854 VQH--PNLVTLIGYHVSEAEMFLIYNYLPGGNLEK-FIQDRPRRTVEWSMLHKIALDVARALAYL-HDECVPRVLHRDIK 929 (1082)
Q Consensus 854 l~h--~niv~l~~~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlk 929 (1082)
+.. -++.+++++ ...++||||+.+..+.. .+++ ..++.++...+..+++.++..| |.. ++||||++
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 864 356666654 56789999997654322 2222 2345556778889999999999 787 99999999
Q ss_pred CCCEEEcCCCcEEEeecccceecC
Q 045553 930 PSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 930 ~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+.||+++ ++.++|+|||.+....
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeCC
Confidence 9999997 4679999999887653
No 471
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.08 E-value=5.1e-11 Score=118.53 Aligned_cols=121 Identities=28% Similarity=0.342 Sum_probs=50.6
Q ss_pred cccEEEccCCcccccCccccC-CCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhh-hcCcccchhh
Q 045553 544 CMKFLSMAGNEFVGLIPQSFT-NFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWEL-TQLASLEVLE 621 (1082)
Q Consensus 544 ~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ 621 (1082)
.+++|+|++|+|+.+ +.+. .+++|+.|+|++|.|+.+ + .+..+++|+.|++++|+|+. +++.+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEE
Confidence 488899999999865 2455 578899999999999854 3 58889999999999999994 44444 5689999999
Q ss_pred ccCcccCCCC-CccccCCcccceecccCcccCCCCCC----CCCCCCcccEEec
Q 045553 622 LSANSLSGEI-PSEFSKLEHLNVLRLDHNNLTGRIPP----GFGTRSSLSIFDV 670 (1082)
Q Consensus 622 Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~l~l 670 (1082)
|++|+|...- -..+..+++|+.|+|.+|+++.. +. .+..+++|+.||-
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 9999997532 24567888999999999999843 33 2566788888874
No 472
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=2.2e-11 Score=131.31 Aligned_cols=138 Identities=24% Similarity=0.172 Sum_probs=88.9
Q ss_pred hcCCCCCCEEeCcCCCCCCCCC--ccccCCCCCCeEEccCcccccccC--ccccCCCCCcEEEcccCcccccCCcccccc
Q 045553 130 IGQLSLLEILDLSFNSFHGPIP--PTLQNCSSLRLINLSGNQFNGTIP--AFFGQSPGFQVVSLSFNLLSGSVPEEFGDN 205 (1082)
Q Consensus 130 ~~~l~~L~~L~Ls~n~l~~~~p--~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 205 (1082)
=.++++|+...|.+..+. ..+ .....+++++.||||.|-+....+ .....||+|+.|+|+.|++...........
T Consensus 117 Qsn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 356788999999998887 334 367789999999999998875544 456678999999999998874444333334
Q ss_pred cccccEEEcccCccCCCC-CccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCc
Q 045553 206 CVSLEHILLAANSLTGSI-PPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLS 268 (1082)
Q Consensus 206 l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 268 (1082)
++.|+.|.|+.|.++-.- ......+|+|..|+|..|...+.......-+..|++|||++|++-
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li 259 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI 259 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc
Confidence 556666666666666211 112334566666666666422233333344555666666666654
No 473
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.03 E-value=2e-09 Score=104.82 Aligned_cols=131 Identities=24% Similarity=0.438 Sum_probs=102.1
Q ss_pred ceecccCceEEEEEEEcCCeEEEEEEeecCccc--------cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 807 NCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ--------GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..+++|+-+.+|.+.+. |..+++|.-...... ....-.+|++++.+.+--.|.-.+=+..+.....++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 45789999999999875 555666654332221 123456799999988766666666666778888999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
++|..|.+++... ...++..+-+-+.-||.. +|+|||+.++||.+..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888764 245667777778889999 999999999999998875 99999999975
No 474
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.03 E-value=2.7e-09 Score=103.01 Aligned_cols=144 Identities=20% Similarity=0.284 Sum_probs=108.9
Q ss_pred ccceecccCceEEEEEEEcCCeEEEEEEeecCccc--------cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 805 VQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ--------GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
....+-+|+-+.|+++.+. |+...||.-...... ..++...|++.+.+.+--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 5578999999999999886 777777764332221 2345678999998887555554445566667778999
Q ss_pred eecCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC---cEEEeecccceec
Q 045553 877 NYLPG-GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL---NAYLSDFGLARLL 952 (1082)
Q Consensus 877 E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DfGla~~~ 952 (1082)
||+++ .++.+++...-......+....++..|-+.+.-||.. +|+||||..+||++..++ .+.++|||++..-
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 99966 4888888775444444444478899999999999999 999999999999997654 4589999998754
No 475
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.02 E-value=5.1e-11 Score=121.89 Aligned_cols=127 Identities=25% Similarity=0.286 Sum_probs=57.7
Q ss_pred ccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccC
Q 045553 545 MKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSA 624 (1082)
Q Consensus 545 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 624 (1082)
|++|||++|.|+. +.++..-++.++.|++|+|.|..+ +.+..+++|+.||||+|.++ .+.++-..|.+.++|.|++
T Consensus 286 LtelDLS~N~I~~-iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~ 361 (490)
T KOG1259|consen 286 LTELDLSGNLITQ-IDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQ 361 (490)
T ss_pred hhhccccccchhh-hhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhh
Confidence 4444444444442 223344444455555555554422 22444455555555555554 3333334444555555555
Q ss_pred cccCCCCCccccCCcccceecccCcccCCCC-CCCCCCCCcccEEeccCCcccc
Q 045553 625 NSLSGEIPSEFSKLEHLNVLRLDHNNLTGRI-PPGFGTRSSLSIFDVSFNNLSG 677 (1082)
Q Consensus 625 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~l~ls~N~l~~ 677 (1082)
|.|... ..+..|-+|..||+++|+|.... -..+++++-|+.+.|.+|++.+
T Consensus 362 N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 362 NKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 554411 23344444555555555554211 1234555555555555555553
No 476
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.00 E-value=8.1e-11 Score=120.41 Aligned_cols=131 Identities=25% Similarity=0.242 Sum_probs=65.2
Q ss_pred CCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccC
Q 045553 230 CTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDG 309 (1082)
Q Consensus 230 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~ 309 (1082)
.+.|++||||+|.|+ .+.++..-++.++.|++|+|.|+.+ . .+..+++|+.|+|++|.+....
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v-~-nLa~L~~L~~LDLS~N~Ls~~~-------------- 345 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV-Q-NLAELPQLQLLDLSGNLLAECV-------------- 345 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee-h-hhhhcccceEeecccchhHhhh--------------
Confidence 345555555555555 4445555555555555555555422 1 2555555555555554332111
Q ss_pred CCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCC-CCccccCCCCCCEEecCCCcC
Q 045553 310 GEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQ-IPASLGNCKSLYFLDLSSNNL 388 (1082)
Q Consensus 310 ~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~-~p~~~~~l~~L~~L~Ls~N~l 388 (1082)
.+-..|-+.+.|.++.|.|... ..+.++-+|..||+++|+|... -...++++|-|+.|.|.+|+|
T Consensus 346 ------------Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 346 ------------GWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred ------------hhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 1112233444444444444332 2345555666666666666521 123456666666666666666
Q ss_pred ccc
Q 045553 389 TGL 391 (1082)
Q Consensus 389 ~~~ 391 (1082)
.+.
T Consensus 412 ~~~ 414 (490)
T KOG1259|consen 412 AGS 414 (490)
T ss_pred ccc
Confidence 543
No 477
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.99 E-value=2.5e-10 Score=113.67 Aligned_cols=126 Identities=30% Similarity=0.324 Sum_probs=36.8
Q ss_pred CCCCCCEEEcccCCCcccCChhhc-CCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccc-cCCCCCc
Q 045553 108 DLTQLRVLLLAFNGFSGELPLEIG-QLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFF-GQSPGFQ 185 (1082)
Q Consensus 108 ~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~ 185 (1082)
+..++++|+|++|.|+ .+. .++ .+.+|+.|||++|.|+ .+. .+..+++|++|++++|+|+. +...+ ..+++|+
T Consensus 17 n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--
T ss_pred cccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCc-cccchHHhCCcCC
Confidence 3344556666666555 222 233 3555555666665555 222 34555555555555555552 22222 2345555
Q ss_pred EEEcccCcccccCCcccccccccccEEEcccCccCCCC-CccccCCCCccEEEccCCcCCCCc---CccccCCCCCCEEe
Q 045553 186 VVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSI-PPSLGNCTELRSLLLSSNMLQGDI---PSSFGQLVNLEVLD 261 (1082)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~---p~~~~~l~~L~~L~ 261 (1082)
+|+|++|+|. ..- -..+..+++|+.|+|.+|.++... ...+..+++|+.||
T Consensus 92 ~L~L~~N~I~-------------------------~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 92 ELYLSNNKIS-------------------------DLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp EEE-TTS----------------------------SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred EEECcCCcCC-------------------------ChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 5555555544 211 124566777777777777776321 13456678888877
Q ss_pred CC
Q 045553 262 LS 263 (1082)
Q Consensus 262 Ls 263 (1082)
-.
T Consensus 147 ~~ 148 (175)
T PF14580_consen 147 GQ 148 (175)
T ss_dssp TE
T ss_pred CE
Confidence 53
No 478
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.96 E-value=4.3e-09 Score=112.05 Aligned_cols=142 Identities=20% Similarity=0.238 Sum_probs=110.0
Q ss_pred ceecccCceEEEEEEEcCCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCC--ceeeEeeeeccC---CeEEEEEeecC
Q 045553 807 NCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHP--NLVTLIGYHVSE---AEMFLIYNYLP 880 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~---~~~~lV~E~~~ 880 (1082)
+.|+.|.++.||+++..+|..+++|....... .....+..|+++++.+++. .+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999887678999999765432 2345688999999999764 456677776654 36789999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----------------------------------------
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDEC----------------------------------------- 919 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------------- 919 (1082)
|.++.+.+.. ..++......++.++++++++||+..
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9888776531 24677777788888888888888531
Q ss_pred ------------CCCeEeccCCCCCEEEcC--CCcEEEeeccccee
Q 045553 920 ------------VPRVLHRDIKPSNILLDN--NLNAYLSDFGLARL 951 (1082)
Q Consensus 920 ------------~~~ivH~Dlk~~Nill~~--~~~~kl~DfGla~~ 951 (1082)
...++|||+.+.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66789999998753
No 479
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.91 E-value=1.8e-10 Score=121.39 Aligned_cols=218 Identities=21% Similarity=0.215 Sum_probs=131.8
Q ss_pred ccccccCCCCCCEEEcccC---CCcccCChh-------hcCCCCCCEEeCcCCCCCCCCCcc----ccCCCCCCeEEccC
Q 045553 102 LSRAIGDLTQLRVLLLAFN---GFSGELPLE-------IGQLSLLEILDLSFNSFHGPIPPT----LQNCSSLRLINLSG 167 (1082)
Q Consensus 102 l~~~l~~l~~L~~L~L~~n---~l~~~~p~~-------~~~l~~L~~L~Ls~n~l~~~~p~~----l~~l~~L~~L~Ls~ 167 (1082)
+.+.+.+.++|+..++++- +....+|+. +...++|++||||.|.|....+.. +.++..|++|.|.+
T Consensus 50 i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N 129 (382)
T KOG1909|consen 50 IAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNN 129 (382)
T ss_pred HHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhc
Confidence 4556777788888888863 333355554 345579999999999988555443 46788999999999
Q ss_pred cccccccCc-------------cccCCCCCcEEEcccCcccccCCc----ccccccccccEEEcccCccCCCC----Ccc
Q 045553 168 NQFNGTIPA-------------FFGQSPGFQVVSLSFNLLSGSVPE----EFGDNCVSLEHILLAANSLTGSI----PPS 226 (1082)
Q Consensus 168 N~l~~~~p~-------------~~~~l~~L~~L~L~~N~l~~~~p~----~~~~~l~~L~~L~L~~N~l~~~~----~~~ 226 (1082)
|.+.-.--. ....-++|+++..++|++. ..+. ..+...+.|+.+.+..|.|.... ...
T Consensus 130 ~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrle-n~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~ea 208 (382)
T KOG1909|consen 130 CGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLE-NGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEA 208 (382)
T ss_pred CCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccc-cccHHHHHHHHHhccccceEEEecccccCchhHHHHHH
Confidence 988732111 2334467777777777766 2221 12223456666666666655221 224
Q ss_pred ccCCCCccEEEccCCcCCCC----cCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCC
Q 045553 227 LGNCTELRSLLLSSNMLQGD----IPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLP 302 (1082)
Q Consensus 227 ~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~ 302 (1082)
+..+++|+.|||..|.++.. +...+..+++|++|++++|.+......+|.
T Consensus 209 l~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~-------------------------- 262 (382)
T KOG1909|consen 209 LEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFV-------------------------- 262 (382)
T ss_pred HHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHH--------------------------
Confidence 45566666666666666521 234455566666666666666543332221
Q ss_pred CcccccCCCcccccCCCCCccc-cCCCCCcEEEcCCCcccCCC----CcccccccCCCeEEcCCcccc
Q 045553 303 IQPVVDGGEDYNFFDGGLPDSI-TRLPNLRVFWAPNLNLEGIF----PQNWELCSKLEMLNLAHNFFT 365 (1082)
Q Consensus 303 ~~~~~~~~~~~n~~~~~~p~~l-~~l~~L~~L~l~~n~l~~~~----~~~l~~l~~L~~L~Ls~N~i~ 365 (1082)
+.+ ...|+|+.|.+.+|.|+..- .......+.|+.|+|++|++.
T Consensus 263 -------------------~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 263 -------------------DALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred -------------------HHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 111 12456667777777665422 223455788999999999983
No 480
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.87 E-value=2.1e-10 Score=133.61 Aligned_cols=244 Identities=23% Similarity=0.249 Sum_probs=135.9
Q ss_pred CCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccE
Q 045553 132 QLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEH 211 (1082)
Q Consensus 132 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~ 211 (1082)
.+..++.+++..|.+. .+-..+..+++|+.|++.+|+|.. +...+..+++|++|+|++|+|+...+-. .++.|+.
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~l~---~l~~L~~ 144 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEGLS---TLTLLKE 144 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccccchh---hccchhh
Confidence 3444555555555555 233335555566666666666552 2222445556666666666555222211 2344666
Q ss_pred EEcccCccCCCCCccccCCCCccEEEccCCcCCCCcC-ccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEecccc
Q 045553 212 ILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIP-SSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDY 290 (1082)
Q Consensus 212 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~ 290 (1082)
|++.+|.|+.. ..+..+++|+.+++++|.+....+ . ...+.+++.+++..|.+.. ...+..+..+..+++.+|.
T Consensus 145 L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhccccc
Confidence 66666666522 234446666666677776663333 1 3556666667777776652 2333444444444555443
Q ss_pred CCcccccCCCCCCcccccCCCcccccCCCCCccccCCC--CCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCC
Q 045553 291 GPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLP--NLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQI 368 (1082)
Q Consensus 291 ~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~--~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~ 368 (1082)
+.... .+..+. +|+.+++++|.+.... ..+..+..+..|++++|++...
T Consensus 220 i~~~~---------------------------~l~~~~~~~L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~n~~~~~- 270 (414)
T KOG0531|consen 220 ISKLE---------------------------GLNELVMLHLRELYLSGNRISRSP-EGLENLKNLPVLDLSSNRISNL- 270 (414)
T ss_pred ceecc---------------------------CcccchhHHHHHHhcccCcccccc-ccccccccccccchhhcccccc-
Confidence 32111 011112 3677778887776643 4566677888888888888732
Q ss_pred CccccCCCCCCEEecCCCcCccc---CCC--CcccCcccEEEecCCcceecC
Q 045553 369 PASLGNCKSLYFLDLSSNNLTGL---LPE--EVSVPCMAVFNVSQNLLSGEI 415 (1082)
Q Consensus 369 p~~~~~l~~L~~L~Ls~N~l~~~---~p~--~~~l~~L~~L~l~~N~l~~~~ 415 (1082)
..+...+.+..+.+..|++... ... ....+.++.+.+..|++....
T Consensus 271 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 271 -EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred -ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccc
Confidence 3355567778888888877632 222 335677888888888876543
No 481
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.87 E-value=9.6e-10 Score=82.23 Aligned_cols=38 Identities=53% Similarity=1.172 Sum_probs=28.7
Q ss_pred CHHHHHHHHhcccCCCCCCCCCCCCC-CCCceeeeeEee
Q 045553 1 KNALLQLKSAITEDPLGLTSNWNPKD-TDSCSWHGVTCD 38 (1082)
Q Consensus 1 ~~~l~~~k~~~~~~~~~~~~~W~~~~-~~~c~w~gv~C~ 38 (1082)
++||++||+++..+|.+.+++|+..+ ++||+|.||+|+
T Consensus 5 ~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 5 RQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred HHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 48999999999878889999998753 899999999996
No 482
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.86 E-value=2.6e-10 Score=132.92 Aligned_cols=248 Identities=23% Similarity=0.195 Sum_probs=156.6
Q ss_pred cCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcE
Q 045553 107 GDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQV 186 (1082)
Q Consensus 107 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 186 (1082)
..+..++.+.++.|.+. .+-..+..+++|+.|++.+|.|. .+...+..+++|++|+|++|+|+... .+..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhh
Confidence 34566666667777776 34445667777777777777777 44444667777778888887777432 3345566777
Q ss_pred EEcccCcccccCCcccccccccccEEEcccCccCCCCC-ccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCC
Q 045553 187 VSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIP-PSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRN 265 (1082)
Q Consensus 187 L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 265 (1082)
|++++|.|+ .+...- .++.|+.+++++|.+...-+ . ...+.+++.+++.+|.+. ....+..+..+..+++..|
T Consensus 145 L~l~~N~i~-~~~~~~--~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n 218 (414)
T KOG0531|consen 145 LNLSGNLIS-DISGLE--SLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDN 218 (414)
T ss_pred heeccCcch-hccCCc--cchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh--cccchHHHHHHHHhhcccc
Confidence 778887776 443322 26777777888887774433 1 466677777888888776 2334445555666677777
Q ss_pred cCcccCCccccCCC--CCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCC
Q 045553 266 FLSGIVPSELGMCK--QLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGI 343 (1082)
Q Consensus 266 ~l~~~~p~~l~~l~--~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~ 343 (1082)
.++..-+ +..+. .|+.++++.|.+.. .+..+..+.++..|++.+|.+...
T Consensus 219 ~i~~~~~--l~~~~~~~L~~l~l~~n~i~~--------------------------~~~~~~~~~~l~~l~~~~n~~~~~ 270 (414)
T KOG0531|consen 219 KISKLEG--LNELVMLHLRELYLSGNRISR--------------------------SPEGLENLKNLPVLDLSSNRISNL 270 (414)
T ss_pred cceeccC--cccchhHHHHHHhcccCcccc--------------------------ccccccccccccccchhhcccccc
Confidence 7763322 12222 26667776654332 113455666777777777777654
Q ss_pred CCcccccccCCCeEEcCCccccCC---CCcc-ccCCCCCCEEecCCCcCcccCCC
Q 045553 344 FPQNWELCSKLEMLNLAHNFFTGQ---IPAS-LGNCKSLYFLDLSSNNLTGLLPE 394 (1082)
Q Consensus 344 ~~~~l~~l~~L~~L~Ls~N~i~~~---~p~~-~~~l~~L~~L~Ls~N~l~~~~p~ 394 (1082)
. .+.....+..+.+..|.+... .... ....+.+..+.+.+|++....+.
T Consensus 271 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 271 E--GLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred c--cccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccccc
Confidence 2 345556777788888876522 2222 55678899999999988865543
No 483
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.85 E-value=6.8e-08 Score=107.25 Aligned_cols=168 Identities=21% Similarity=0.321 Sum_probs=130.8
Q ss_pred ceEEEEE-EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeecc----CCeEEEEEeecCC-CCHHHH
Q 045553 814 FGATYKA-EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS----EAEMFLIYNYLPG-GNLEKF 887 (1082)
Q Consensus 814 ~g~Vy~a-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lV~E~~~~-gsL~~~ 887 (1082)
-.+.||+ ...+|..|++|+++..+.........-++.++++.|+|+|++..++.. +...++||+|+++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 4678998 455799999999965544443334566889999999999999998873 4568999999986 477765
Q ss_pred HhhCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 888 IQDRP-------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 888 l~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
--... ....+++.+|.++.|++.||.++|+. |..-+-+.+.+|+++.+.+++|+..|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 43221 34578899999999999999999999 999999999999999999999998888776543
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCC
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKA 1002 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p 1002 (1082)
+.. |-+. -..+-|.-.||.+++.|.||..-
T Consensus 446 d~~---------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT---------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC---------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 331 1111 12467999999999999999653
No 484
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.82 E-value=4.3e-09 Score=130.60 Aligned_cols=272 Identities=22% Similarity=0.167 Sum_probs=127.7
Q ss_pred CCCEEEcccCC--CcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEE
Q 045553 111 QLRVLLLAFNG--FSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVS 188 (1082)
Q Consensus 111 ~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 188 (1082)
.|++|-+..|. +....++.|..++.|+.|||++|.=-+.+|+.+++|-+|++|+|++..++ .+|..+.+|..|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 45555555554 33222233555566666666655444455666666666666666666555 5555556666666666
Q ss_pred cccCcccccCCcccccccccccEEEcccCccC--CCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCC----EEeC
Q 045553 189 LSFNLLSGSVPEEFGDNCVSLEHILLAANSLT--GSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLE----VLDL 262 (1082)
Q Consensus 189 L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L 262 (1082)
+.++.-...+|. +...+.+|++|.+..-... ...-..+.++.+|+.+....... .+-..+..++.|. .+.+
T Consensus 625 l~~~~~l~~~~~-i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~ 701 (889)
T KOG4658|consen 625 LEVTGRLESIPG-ILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSI 701 (889)
T ss_pred cccccccccccc-hhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhh
Confidence 655544433322 2223555666555443311 11112233333333333322222 0111122222222 2222
Q ss_pred CCCcCcccCCccccCCCCCcEEEeccccCCcccccC-CCCCCcc---cccCCCcccccCCCCCccccCCCCCcEEEcCCC
Q 045553 263 SRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREH-GDLPIQP---VVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNL 338 (1082)
Q Consensus 263 s~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~-~~l~~~~---~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n 338 (1082)
..+... ..+..+..+.+|+.|.+.++.+....... ....... ....-...+.-....+.+..-.++|+.|++..+
T Consensus 702 ~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~r~l~~~~f~~~L~~l~l~~~ 780 (889)
T KOG4658|consen 702 EGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHMLRDLTWLLFAPHLTSLSLVSC 780 (889)
T ss_pred cccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccccccchhhccCcccEEEEecc
Confidence 222222 33445555566666666554432111000 0000000 000000001111233444456678888888888
Q ss_pred cccCCCCcccccccCCCeEEcCCccccCC-CCccccCCCCCCEEecCCCc
Q 045553 339 NLEGIFPQNWELCSKLEMLNLAHNFFTGQ-IPASLGNCKSLYFLDLSSNN 387 (1082)
Q Consensus 339 ~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~-~p~~~~~l~~L~~L~Ls~N~ 387 (1082)
.....+......+..+..+-+..+.+.+. .......++++..+.+++=.
T Consensus 781 ~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~~~ 830 (889)
T KOG4658|consen 781 RLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSFLK 830 (889)
T ss_pred cccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCccc
Confidence 87777777777777777777777777655 34555556666655555443
No 485
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.82 E-value=3.8e-09 Score=120.44 Aligned_cols=251 Identities=20% Similarity=0.198 Sum_probs=175.7
Q ss_pred HHhcCccccceecccCceEEEEEEEc--CCeEEEEEEeecCccccHHHH--HHHHHHHhcc-CCCceeeEeeeeccCCeE
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEII--PGVVVAVKRLSVGRFQGVQQF--AAEIRTLGRV-QHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~~--~~~~vavK~~~~~~~~~~~~~--~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 872 (1082)
....+|.....||.|.|+.|++.... ++..+++|...........++ ..|+.+...+ .|.++++....+..-+..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 34567888899999999999998543 578899998865543322221 2344444444 588888877777777777
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC-CcEEEeeccccee
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN-LNAYLSDFGLARL 951 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla~~ 951 (1082)
|+=-||+++++......- ...+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..++.|||.+..
T Consensus 342 ~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccccc
Confidence 899999999987766532 34577788999999999999999999 99999999999999886 7889999999864
Q ss_pred cCCCCCccccCcccCCCc-ccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 952 LGTSETHATTDVAGTFGY-VAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 952 ~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
+... ......++..| .+++......+..+.|+||||.-+.|..+|..- .... .+|.. ++.+.+.
T Consensus 417 ~~~~---~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l-s~~~---------~~~~~--i~~~~~p 481 (524)
T KOG0601|consen 417 LAFS---SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL-SESG---------VQSLT--IRSGDTP 481 (524)
T ss_pred ccee---cccccccccccccchhhccccccccccccccccccccccccCccc-Cccc---------cccee--eeccccc
Confidence 3211 11111223334 355566677888999999999999999888642 2111 11111 1111111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
. .+ .....+..+...++.+++..||.+.++..+.+-..
T Consensus 482 ~---------~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 482 N---------LP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred C---------CC-chHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 1 11 22267788888899999999999998877665443
No 486
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.81 E-value=1.4e-09 Score=129.57 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=171.6
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.-..+.+.+-+-+|.++.++-++-. .|...+.|...... ....+....+-.+.-..++|-+++....+.-....++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3445667778889999999987432 34444444432221 1111222222233323345666665555556778899
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
|++|..+++|..-++..+ ..+.+........+..+.+|||.. .+.|||++|.|.+...++..+++|||.....+.
T Consensus 882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccc
Confidence 999999999999998754 345455556677788899999998 799999999999999999999999984432211
Q ss_pred C---------------------C---------CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 045553 955 S---------------------E---------THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALD 1004 (1082)
Q Consensus 955 ~---------------------~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~ 1004 (1082)
. . ........||+.|.+||...+......+|+|+.|+.++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 0 011334679999999999999999999999999999999999999998
Q ss_pred CCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHH
Q 045553 1005 PSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMR 1068 (1082)
Q Consensus 1005 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ 1068 (1082)
...+. +.++.+.... .-+...+.....++..++.+.+..+|.+|-.|.
T Consensus 1037 a~tpq--------~~f~ni~~~~--------~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETPQ--------QIFENILNRD--------IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccchh--------hhhhccccCC--------CCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 55433 2221111110 011223455667888889999999999997665
No 487
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.81 E-value=1.6e-07 Score=101.50 Aligned_cols=262 Identities=15% Similarity=0.139 Sum_probs=162.6
Q ss_pred ccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeee------eccC-CeEEEEEe
Q 045553 805 VQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGY------HVSE-AEMFLIYN 877 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~~~~-~~~~lV~E 877 (1082)
....||+|+.+.+|-..- -..-+.|++.........+..+|+ ...-.||-+-.-+.+ ...+ ....+.|.
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~aqk~a~l--a~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQAQKVAEL--AATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CCccccCCccceeeecch--hhchhheeecCCCchHHHHHHHHh--ccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 456799999999996521 122345777655444333322222 222356544331221 1122 23677888
Q ss_pred ecCCC-CHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 878 YLPGG-NLEKFIQDR----PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 878 ~~~~g-sL~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
.+++. -+..+.... .-....|....++++.+|.+.+-||.. |.+-||+.++|+|+++++.+.+.|=+.-...
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceeec
Confidence 87664 233333221 123478999999999999999999999 9999999999999999999999986655443
Q ss_pred CCCCCccccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhC-CCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISD-KKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
.+ ....-..+|...|.+||.-. +..-+...|-|.+||++++++.| ++||............+.. .+..
T Consensus 168 ~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~----~Ia~ 241 (637)
T COG4248 168 AN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET----DIAH 241 (637)
T ss_pred cC--CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh----hhhc
Confidence 22 22333457899999999764 34456789999999999999887 8999865433222211111 1111
Q ss_pred CCCccccccc-cCCCCC-----hHHHHHHHHHHHHcccCC--CCCCCCHHHHHHHHhhhCC
Q 045553 1027 GRPCEFFTAG-LWDCGP-----HDDLIEMLNLAIMCTGES--LSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1027 ~~~~~~~d~~-l~~~~~-----~~~~~~l~~li~~cl~~~--p~~RPt~~ev~~~L~~i~~ 1079 (1082)
+.....-|.. -....| .-.+..+.-+..+|+... +.-||+.+..+..|..++.
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 1111111110 000111 222456778888888764 5679999998888876543
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.79 E-value=6.4e-08 Score=104.40 Aligned_cols=140 Identities=19% Similarity=0.187 Sum_probs=101.5
Q ss_pred eecccCceEEEEEEEcCCeEEEEEEeecCccc-----------cHHHHHHHHHHHhccCCCce--eeEeeeecc-----C
Q 045553 808 CIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ-----------GVQQFAAEIRTLGRVQHPNL--VTLIGYHVS-----E 869 (1082)
Q Consensus 808 ~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~-----~ 869 (1082)
.+-......|+++++ +|+.|.||+....... ....+.+|++.+.++...+| +++++++.. .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 333333345667766 4788999987543311 11137789999888854433 344556543 2
Q ss_pred CeEEEEEeecCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-------CCcE
Q 045553 870 AEMFLIYNYLPGG-NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-------NLNA 941 (1082)
Q Consensus 870 ~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-------~~~~ 941 (1082)
...++|+|++++. +|.+++........+......++.+++..+.-||.. +|+|||++++|||++. +..+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceE
Confidence 3578999999876 899998643233456677889999999999999999 9999999999999975 4689
Q ss_pred EEeeccccee
Q 045553 942 YLSDFGLARL 951 (1082)
Q Consensus 942 kl~DfGla~~ 951 (1082)
.++||+.++.
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998864
No 489
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.77 E-value=5.1e-08 Score=98.94 Aligned_cols=126 Identities=23% Similarity=0.321 Sum_probs=83.9
Q ss_pred EEEEEEEcCCeEEEEEEeecCcc-------------c-------------cHHHHHHHHHHHhccCCC--ceeeEeeeec
Q 045553 816 ATYKAEIIPGVVVAVKRLSVGRF-------------Q-------------GVQQFAAEIRTLGRVQHP--NLVTLIGYHV 867 (1082)
Q Consensus 816 ~Vy~a~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 867 (1082)
.||.|...+|..+|||..+.... . ......+|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999888899999999854211 0 023456899999999866 456666543
Q ss_pred cCCeEEEEEeecC--CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEeccCCCCCEEEcCCCcEEEe
Q 045553 868 SEAEMFLIYNYLP--GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYL-HDECVPRVLHRDIKPSNILLDNNLNAYLS 944 (1082)
Q Consensus 868 ~~~~~~lV~E~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 944 (1082)
..++||||++ |..+..+.... ++.+....++.+++..+..+ |.. +|+|||+.+.||+++++ .+.|+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEE
Confidence 4589999998 54554433321 11344566778888866664 677 99999999999999988 99999
Q ss_pred ecccceecC
Q 045553 945 DFGLARLLG 953 (1082)
Q Consensus 945 DfGla~~~~ 953 (1082)
|||.+....
T Consensus 149 Df~qav~~~ 157 (188)
T PF01163_consen 149 DFGQAVDSS 157 (188)
T ss_dssp -GTTEEETT
T ss_pred ecCcceecC
Confidence 999887643
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.74 E-value=6.2e-09 Score=85.20 Aligned_cols=60 Identities=32% Similarity=0.579 Sum_probs=36.0
Q ss_pred cccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcC
Q 045553 544 CMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNF 603 (1082)
Q Consensus 544 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 603 (1082)
+|++|++++|+|+.+.+.+|.++++|++|++++|.|+.+.|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 355666666666655555666666666666666666655555566666666666666553
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.70 E-value=7.2e-09 Score=84.82 Aligned_cols=59 Identities=42% Similarity=0.582 Sum_probs=29.7
Q ss_pred ccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCc
Q 045553 616 SLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNN 674 (1082)
Q Consensus 616 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~ 674 (1082)
+|++|+|++|+|+...+..|.++++|++|++++|+++...|..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34445555555554434445555555555555555554444455555555555555554
No 492
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.66 E-value=1.7e-08 Score=125.40 Aligned_cols=126 Identities=29% Similarity=0.339 Sum_probs=71.1
Q ss_pred CCCCeEEccCcccccccCccccCCCCCcEEEcccCc--ccccCCcccccccccccEEEcccCccCCCCCccccCCCCccE
Q 045553 158 SSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNL--LSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRS 235 (1082)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~--l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 235 (1082)
...+...+-+|++. .++.... .+.|++|-+..|. +. .++..++..++.|..|+|++|.=.+.+|..++++-+|++
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 44555555555554 2222221 2245555555554 33 555555555666666666655544466666666666666
Q ss_pred EEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEec
Q 045553 236 LLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLR 287 (1082)
Q Consensus 236 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~ 287 (1082)
|+|++..+. .+|..+.+|..|.+|++..+.-...+|.....+.+|++|.+.
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~ 650 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLP 650 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEee
Confidence 666666666 566666666666666666665444445555556666666663
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.62 E-value=2e-07 Score=96.56 Aligned_cols=135 Identities=20% Similarity=0.191 Sum_probs=98.0
Q ss_pred ccccceecccCceEEEEEEEcCCeEEEEEEeecCccc----------------------cHHHHHHHHHHHhccCCC--c
Q 045553 803 FNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ----------------------GVQQFAAEIRTLGRVQHP--N 858 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~--n 858 (1082)
+.+.+.||-|--+.||.|..++|.++|||.-+..... .....++|+++|+++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 4567899999999999999889999999976433211 122356899999988755 5
Q ss_pred eeeEeeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC
Q 045553 859 LVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN 938 (1082)
Q Consensus 859 iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 938 (1082)
+.+.++ .+...+||||++|--|...- ++.+....++..|++-+.-.-.. ||||||+++-||+++++
T Consensus 173 VP~P~~----~nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~d 238 (304)
T COG0478 173 VPKPIA----WNRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTED 238 (304)
T ss_pred CCCccc----cccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecC
Confidence 666655 35778999999886665432 12233334455555555544455 99999999999999999
Q ss_pred CcEEEeeccccee
Q 045553 939 LNAYLSDFGLARL 951 (1082)
Q Consensus 939 ~~~kl~DfGla~~ 951 (1082)
|.+.++||--+..
T Consensus 239 g~~~vIDwPQ~v~ 251 (304)
T COG0478 239 GDIVVIDWPQAVP 251 (304)
T ss_pred CCEEEEeCccccc
Confidence 9999999965543
No 494
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.53 E-value=5.2e-09 Score=95.55 Aligned_cols=108 Identities=22% Similarity=0.326 Sum_probs=70.0
Q ss_pred ccEEEccCCcccccCcc---ccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhh
Q 045553 545 MKFLSMAGNEFVGLIPQ---SFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLE 621 (1082)
Q Consensus 545 L~~L~L~~N~i~~~~~~---~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 621 (1082)
+..++|++|++-.+ ++ .+.....|+..+|++|.+....+..-...+.++.|+|++|+|+ .+|.++..++.|+.|+
T Consensus 29 ~h~ldLssc~lm~i-~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYI-ADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhhHH-HHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 55666777766522 22 3344555666777777777433333344557777777777777 6677777777777777
Q ss_pred ccCcccCCCCCccccCCcccceecccCcccCCCCC
Q 045553 622 LSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIP 656 (1082)
Q Consensus 622 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 656 (1082)
++.|.|. ..|..+..|.+|..|+..+|.+. .+|
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid 139 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EID 139 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc-cCc
Confidence 7777777 56666666777777777777776 344
No 495
>PRK09902 hypothetical protein; Provisional
Probab=98.52 E-value=9.4e-07 Score=89.96 Aligned_cols=138 Identities=14% Similarity=0.123 Sum_probs=105.6
Q ss_pred cccCceEEEEEEEcCCeEEEEEEeecCc------cccHHHHHHHHHHHhccCCCc--eeeEeeeecc----CCeEEEEEe
Q 045553 810 GSGGFGATYKAEIIPGVVVAVKRLSVGR------FQGVQQFAAEIRTLGRVQHPN--LVTLIGYHVS----EAEMFLIYN 877 (1082)
Q Consensus 810 g~G~~g~Vy~a~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~----~~~~~lV~E 877 (1082)
|+||.+.|+..... |..+-+|+-.... +.....|.+|+..+.++..-+ +.+++.+... ....+||+|
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe 105 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTE 105 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEE
Confidence 67899999998765 5578888764221 235678999999999986433 4444422211 234689999
Q ss_pred ecCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc--EEEeeccccee
Q 045553 878 YLPG-GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN--AYLSDFGLARL 951 (1082)
Q Consensus 878 ~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~kl~DfGla~~ 951 (1082)
-+.+ .+|.+++......+.+......+..+++.+++-||+. ++.|+|+.++||+++.++. ++++||.-++.
T Consensus 106 ~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 106 DMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred eCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 8854 5999998775555677888889999999999999999 9999999999999986666 99999987764
No 496
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.44 E-value=1.7e-08 Score=92.34 Aligned_cols=137 Identities=19% Similarity=0.287 Sum_probs=105.9
Q ss_pred ceeEEEccCCcccccCCccccc--cCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEE
Q 045553 519 DGLIFDIGNNKLIGEVPSDMGS--HCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFL 596 (1082)
Q Consensus 519 ~l~~l~l~~n~l~~~ip~~~~~--~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 596 (1082)
++..+||+.+.+- .|++.... ....|+..+|++|.+....+..-..++.++.|+|++|.|+ .+|..+..++.|+.|
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 4457788888765 56654432 2345778999999999776665567789999999999999 678889999999999
Q ss_pred EcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCC
Q 045553 597 SLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGF 659 (1082)
Q Consensus 597 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 659 (1082)
+++.|.+. ..|..+..|.+|-+|+..+|.+. .+|.++..-...-..++.++.+.+.-+..+
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~kl 166 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKL 166 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccc
Confidence 99999999 78888888999999999999998 666554433444455667777776655443
No 497
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.43 E-value=4.4e-08 Score=100.93 Aligned_cols=124 Identities=21% Similarity=0.185 Sum_probs=85.1
Q ss_pred CccccccccccCCCCCCEEEcccCCCcccCC-hhh-cCCCCCCEEeCcCCCCCC--CCCccccCCCCCCeEEccCccccc
Q 045553 97 KLSGNLSRAIGDLTQLRVLLLAFNGFSGELP-LEI-GQLSLLEILDLSFNSFHG--PIPPTLQNCSSLRLINLSGNQFNG 172 (1082)
Q Consensus 97 ~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p-~~~-~~l~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~ 172 (1082)
...|..+-.+..+..++.|.+.++.|...-. ..| ...+.++.|||.+|.|+. ++..-+.+|+.|++|+|+.|++..
T Consensus 32 ~~~g~s~~~v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s 111 (418)
T KOG2982|consen 32 TSAGLSYLGVSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSS 111 (418)
T ss_pred cccccceeeeccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCC
Confidence 3445555556666677778888877763221 223 345788999999999883 345556788999999999998885
Q ss_pred ccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccC
Q 045553 173 TIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLT 220 (1082)
Q Consensus 173 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~ 220 (1082)
.+...-..+.+|++|.|.+..+...--..+...+|.+++|.++.|++.
T Consensus 112 ~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~r 159 (418)
T KOG2982|consen 112 DIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLR 159 (418)
T ss_pred ccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhh
Confidence 443332466788888888888776656666666777777777777443
No 498
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.35 E-value=3.2e-06 Score=88.37 Aligned_cols=107 Identities=29% Similarity=0.435 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHhccCCC--ceeeEeeeeccC----CeEEEEEeecCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH
Q 045553 841 VQQFAAEIRTLGRVQHP--NLVTLIGYHVSE----AEMFLIYNYLPGG-NLEKFIQDRPRRTVEWSMLHKIALDVARALA 913 (1082)
Q Consensus 841 ~~~~~~e~~~l~~l~h~--niv~l~~~~~~~----~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~ 913 (1082)
.....+|...+..+... .+++.+++.... ...++|+|++++. +|.+++..... .+......++.++++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 34577888888877543 345566666542 3458999999874 89999986322 566678899999999999
Q ss_pred HHhhCCCCCeEeccCCCCCEEEcCCC---cEEEeecccceec
Q 045553 914 YLHDECVPRVLHRDIKPSNILLDNNL---NAYLSDFGLARLL 952 (1082)
Q Consensus 914 ~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DfGla~~~ 952 (1082)
-||.. +|+|+|+++.|||++.+. .+.++||+-++..
T Consensus 133 ~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999 999999999999999887 8999999988753
No 499
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.33 E-value=1.6e-07 Score=108.65 Aligned_cols=152 Identities=19% Similarity=0.212 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc--------cccCcccCCCcccchhcc
Q 045553 905 ALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH--------ATTDVAGTFGYVAPEYAM 976 (1082)
Q Consensus 905 ~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~--------~~~~~~gt~~y~aPE~~~ 976 (1082)
+.+++.|+.|+|... ++||++|.|++|.+++.+.+||+.|+.+......... ...-..-...|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 345559999999874 9999999999999999999999999988654331111 001122355799999999
Q ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHc
Q 045553 977 TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMC 1056 (1082)
Q Consensus 977 ~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~c 1056 (1082)
....+.++|+||+||++|.+..|+.+.-... +..+..... ... +..-.-.+..+.+.++.+=+.+.
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~-----~~~~~~~~~--~~~-------~~~~~~~~s~~~p~el~~~l~k~ 248 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAAN-----GGLLSYSFS--RNL-------LNAGAFGYSNNLPSELRESLKKL 248 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhcc-----CCcchhhhh--hcc-------cccccccccccCcHHHHHHHHHH
Confidence 9888999999999999999995554432111 101000000 000 11111123455677888999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 045553 1057 TGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1057 l~~~p~~RPt~~ev~~ 1072 (1082)
+..++..||++.++..
T Consensus 249 l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 249 LNGDSAVRPTLDLLLS 264 (700)
T ss_pred hcCCcccCcchhhhhc
Confidence 9999999998877653
No 500
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.30 E-value=1.1e-08 Score=116.62 Aligned_cols=159 Identities=29% Similarity=0.280 Sum_probs=110.7
Q ss_pred cccccCCCCCCEEEcccCCCcc---cCC----------------------hhhcCC------CCCCEEeCcCCCCCCCCC
Q 045553 103 SRAIGDLTQLRVLLLAFNGFSG---ELP----------------------LEIGQL------SLLEILDLSFNSFHGPIP 151 (1082)
Q Consensus 103 ~~~l~~l~~L~~L~L~~n~l~~---~~p----------------------~~~~~l------~~L~~L~Ls~n~l~~~~p 151 (1082)
|-.|..+..|++|.|+++.+.. ..+ ...+.. -.|...+.+.|.+. .+-
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-~mD 180 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-LMD 180 (1096)
T ss_pred CceeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-hHH
Confidence 4567888999999999988762 110 001111 23666777777777 566
Q ss_pred ccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCC
Q 045553 152 PTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCT 231 (1082)
Q Consensus 152 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 231 (1082)
.++.=++.|+.|||++|++... +.+..+++|++|||++|.+. .+|.--...+. |+.|.+++|.++.. ..+.++.
T Consensus 181 ~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~Lk 254 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTTL--RGIENLK 254 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHhh--hhHHhhh
Confidence 6777788888888888888743 27778888888888888887 77755443444 88888888888732 2467778
Q ss_pred CccEEEccCCcCCCCc-CccccCCCCCCEEeCCCCcCc
Q 045553 232 ELRSLLLSSNMLQGDI-PSSFGQLVNLEVLDLSRNFLS 268 (1082)
Q Consensus 232 ~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~ 268 (1082)
+|+.||+++|-|.+.- -..++.|..|+.|+|.+|.+-
T Consensus 255 sL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 255 SLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 8888888888876432 233556677888888888874
Done!